RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for E2F4 (Homo sapiens)

Ensembl gene IDs: ENSG00000205250

Ensembl transcript IDs: ENST00000379378.8, ENST00000561904.5, ENST00000563238.5, ENST00000564718.1, ENST00000565849.5, ENST00000566368.1, ENST00000567007.5, ENST00000567228.1, ENST00000568485.1, ENST00000568693.1, ENST00000568839.5, ENST00000569573.1

Found 238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCCGGACGAACTGCTGCTGTTACTGTTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGTCCAGCAGGGCAGAAGACTGCA +
Preference number: 1 (lower is better)
Translates to: VRTNCCCYCCCCCCC*CCCCCCCPAGQKTA
Trigger: TGCAGTCTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGTAACAGCAGCAGTTCGTCCGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR CCA 90 bp AGAAGCAAGACACTGAGGCTGGCAGGAACAAGACACTGCCCCCTATaGGGGGTAATGGCAGCTCCTCGGTTCTGTGCCACTGGGTGGCAG +
Preference number: 1 (lower is better)
Translates to: RSKTLRLAGTRHCPL*GVMAAPRFCATGWQ
Trigger: CTGCCACCCAGTGGCACAGAACCGAGGAGCTGCCATTACCCCCCATAGGGGGCAGTGTCTTGTTCCTGCCAGCCTCAGTGTCTTGCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR TCA 90 bp CAGCCATTCCCTGGACTTCTGCACTGCCAGGGACAGCAGTGGGAGTaGGCTGAGGACTATTTGGACGTGAGGCTTCCTGGGACTGGGCTA +
Preference number: 1 (lower is better)
Translates to: QPFPGLLHCQGQQWE*AEDYLDVRLPGTGL
Trigger: TAGCCCAGTCCCAGGAAGCCTCACGTCCAAATAGTCCTCAGCTCACTCCCACTGCTGTCCCTGGCAGTGCAGAAGTCCAGGGAATGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR GCA 90 bp ACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTaGACTGCCAGGGACAGCAGTGGGAGTGAGCTGAGGACTATTTGG +
Preference number: 1 (lower is better)
Translates to: THCDLSCWASHSLDF*TARDSSGSELRTIW
Trigger: CCAAATAGTCCTCAGCTCACTCCCACTGCTGTCCCTGGCAGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR TCA 90 bp TTGTTCACCAGCAGAACCTCAATGGGACCACTCACACTCTTCAGGTaGATCTGGTACTTCTTCTGCCCATTGAGACCCTCTGGGATGGGC +
Preference number: 1 (lower is better)
Translates to: LFTSRTSMGPLTLFR*IWYFFCPLRPSGMG
Trigger: GCCCATCCCAGAGGGTCTCAATGGGCAGAAGAAGTACCAGATTCACCTGAAGAGTGTGAGTGGTCCCATTGAGGTTCTGCTGGTGAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
3UTR-3UTR CCA 90 bp GGGTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACCAGCCGAGCCTGGGCTaGCGAAGGCCGCAGAAAGGG +
Preference number: 2 (lower is better)
Translates to: GLWGSRRWGQSSGLDHPDQPSLG*RRPQKG
Trigger: CCCTTTCTGCGGCCTTCGCCAGCCCAGGCTCGGCTG...GTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR-3UTR CCA 90 bp GTCCCAGGGCCGCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGGAGGCTTCCTGGGACTaGGCTAGGGCAGGCTTGGGC +
Preference number: 2 (lower is better)
Translates to: VPGPPLTVISAAGPAIPWEASWD*ARAGLG
Trigger: GCCCAAGCCTGCCCTAGCCCAGTCCCAGGAAGCCTC...CCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGCGGCCCTGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR TCA 90 bp TATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCTGCCAGAACTGTGCGGTaGGGGGAGGCCGGAGAAGCC +
Preference number: 2 (lower is better)
Translates to: YGAAGGGANHQGWTTQTPARTVR*GEAGEA
Trigger: GGCTTCTCCGGCCTCCCCTCACCGCACAGTTCTGGC...AGGAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR-3UTR CCA 90 bp GTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCTCGGTTCTGTGCCACTaGGTGGCAGCCGAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: VMGQQEVGPIIRAGPPRLSVLCH*VAAEPG
Trigger: CCCAGGCTCGGCTGCCACCCAGTGGCACAGAACCGA...GAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR-3UTR CCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCCAGCAGGGCAGAAGACTGCAGAGGCTTCCTGGGACTaGGCTAGGGCAGGCTTGGGC +
Preference number: 2 (lower is better)
Translates to: CCCCCCCCCCCPAGQKTAEASWD*ARAGLG
Trigger: GCCCAAGCCTGCCCTAGCCCAGTCCCAGGAAGCCTC...TGCAGTCTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR TCA 90 bp TATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCTCACGGTGATGGGGGCTaGGTCCTGTTCCCCTGCTCT +
Preference number: 2 (lower is better)
Translates to: YGAAGGGANHQGWTTQTPHGDGG*VLFPCS
Trigger: AGAGCAGGGGAACAGGACTCAGCCCCCATCACCGTG...AGGAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR-3UTR GCA 90 bp CTCCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCAGCTCCTCGGTTCTGTaGCACTGGGTGGCAGCCGAG +
Preference number: 2 (lower is better)
Translates to: LPRDLCSFLVAAPTTCRFSSSVL*HWVAAE
Trigger: CTCGGCTGCCACCCAGTGGCACAGAACCGAGGAGCT...GAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR-3UTR CCA 90 bp GGTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTTCTGTAGGGGTCGGGTaGGAGAGGTCCCCAGGCAAC +
Preference number: 2 (lower is better)
Translates to: GYGAAGGGANHQGWTTQTSVGVG*ERSPGN
Trigger: GTTGCCTGGGGACCTCTCCCACCCGACCCCTACAGA...AGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR-3UTR CCA 90 bp CTCCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCAAGGCCCAGCAGAAGTaGGCACGTGAGAGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: LPRDLCSFLVAAPTTCRFKAQQK*ARERAR
Trigger: CCTGGCCCTCTCACGTGCCCACTTCTGCTGGGCCTT...GAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR-3UTR TCA 90 bp ATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCTCACTTTGGCTCCACGGTaGTGGGGGCTGAGTCCTGTT +
Preference number: 2 (lower is better)
Translates to: MGQQEVGPIIRAGPPRLLTLAPR*WGLSPV
Trigger: AACAGGACTCAGCCCCCATCACCGTGGAGCCAAAGT...GAGGAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR-3UTR GCA 90 bp CACCCTTCCCTCCTAGGGGAAGGAGCTGGCAGAAGCAAGACACTGAGGCTGGCACTGCGAGCACAGAAGTaGCAGCACAGGAGCGGGAGC +
Preference number: 2 (lower is better)
Translates to: HPSLLGEGAGRSKTLRLALRAQK*QHRSGS
Trigger: GCTCCCGCTCCTGTGCTGGCACTTCTGTGCTCGCAG...TGCCAGCCTCAGTGTCTTGCTTCTGCCAGCTCCTTCCCCTAGGAGGGAAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR-3UTR GCA 90 bp GTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCCTGTTCCCCTGCTCTaGGAGCACAGAAGTGCCAGC +
Preference number: 2 (lower is better)
Translates to: VMGQQEVGPIIRAGPPRLPVPLL*EHRSAS
Trigger: GCTGGCACTTCTGTGCTCGCAGAGCAGGGGAACAGG...GAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR-3UTR GCA 90 bp GGTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTAGTGGTGCTGGCATGTaGCCAGTTCCACCCCACCCT +
Preference number: 2 (lower is better)
Translates to: GYGAAGGGANHQGWTTQTSGAGM*PVPPHP
Trigger: AGGGTGGGGTGGAACTGGGCACATGCCAGCACCACT...AGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR-3UTR CCA 90 bp GGTAGCCGCCCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGGAAGCCAGGCGTCTGTaGCTCTCAAGCTCTGTAGGG +
Preference number: 2 (lower is better)
Translates to: GSRPHHLQVLGLKAQQKWEARRL*LSSSVG
Trigger: CCCTACAGAGCTTGAGAGCCACAGACGCCTGGCTTC...CCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGGGCGGCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR-3UTR CCA 90 bp ATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCTCAGACACTGCCCCCTATaGGGGGTAATGGCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: MGQQEVGPIIRAGPPRLLRHCPL*GVMAAP
Trigger: AGGAGCTGCCATTACCCCCCATAGGGGGCAGTGTCT...GAGGAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR-3UTR CCA 90 bp GTCCCAGGGCCGCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGGAGCAAATCTTCAGGTaGTGGCACAGGCACAGCCAC +
Preference number: 2 (lower is better)
Translates to: VPGPPLTVISAAGPAIPWEQIFR*WHRHSH
Trigger: GTGGCTGTGCCTGTGCCACCACCTGAAGATTTGCTC...CCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGCGGCCCTGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR TCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCCAGCAGGGCAGAAGACTGCAAGGACTATTTGGACGTaGGGCTTCCTGGGACTGGGC +
Preference number: 2 (lower is better)
Translates to: CCCCCCCCCCCPAGQKTARTIWT*GFLGLG
Trigger: GCCCAGTCCCAGGAAGCCTCACGTCCAAATAGTCCT...TGCAGTCTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR TCA 90 bp GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCCAGCAGGGCAGAAGACTGCAGGGACAGCAGTGGGAGTaGGCTGAGGACTATTTGGAC +
Preference number: 2 (lower is better)
Translates to: AAAAAAAAAAVQQGRRLQGQQWE*AEDYLD
Trigger: GTCCAAATAGTCCTCAGCTCACTCCCACTGCTGTCC...CTGCAGTCTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR CAA 90 bp AAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTaGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCC +
Preference number: 2 (lower is better)
Translates to: KEVEGLGPDELLLLL*LLLLLLLLLLLLLS
Trigger: GGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR CCA 90 bp CCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGGCACGTGAGCCTAGGGGAAGGAGCTaGCAGAAGCAAGACACTGAG +
Preference number: 2 (lower is better)
Translates to: PHHLQVLGLKAQQKWAREPRGRS*QKQDTE
Trigger: CTCAGTGTCTTGCTTCTGCCAGCTCCTTCCCCTAGG...CTCACGTGCCCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR-3UTR CCA 90 bp GGGCCGCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTCAAATCTTCAGGTGGTaGCACAGGCACAGCCACAGG +
Preference number: 2 (lower is better)
Translates to: GPPLTVISAAGPAIPWTSQIFRW*HRHSHR
Trigger: CCTGTGGCTGTGCCTGTGCCACCACCTGAAGATTTG...AGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGCGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR CCA 90 bp GACTGCAGTGGCCGGGTGTCCAGTGTTGTTGGGCCCAGTGGGAGTGAACTGAGCGAGCAAATCTTCAGGTaGTGGCACAGGCACAGCCAC +
Preference number: 2 (lower is better)
Translates to: DCSGRVSSVVGPSGSELSEQIFR*WHRHSH
Trigger: GTGGCTGTGCCTGTGCCACCACCTGAAGATTTGCTC...GCTCAGTTCACTCCCACTGGGCCCAACAACACTGGACACCCGGCCACTGCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR TCA 90 bp ACTGTCCTTGCTATCAGTCCCAGGGCCGCCACTCACTGTGATCTCAGCTGCTGGAGGACTATTTGGACGTaGGGCTTCCTGGGACTGGGC +
Preference number: 2 (lower is better)
Translates to: TVLAISPRAATHCDLSCWRTIWT*GFLGLG
Trigger: GCCCAGTCCCAGGAAGCCTCACGTCCAAATAGTCCT...CCAGCAGCTGAGATCACAGTGAGTGGCGGCCCTGGGACTGATAGCAAGGACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR CCA 90 bp CCGCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACAAATCTTCAGGTGGTaGCACAGGCACAGCCACAGG +
Preference number: 2 (lower is better)
Translates to: PPLTVISAAGPAIPWTSAQIFRW*HRHSHR
Trigger: CCTGTGGCTGTGCCTGTGCCACCACCTGAAGATTTG...TGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR GCA 90 bp CTTGATGGGCTCAAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTCCTGGACTTCTGCACTaGCAGGGACAGCAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: LDGLKGGRRVGSGRTAAVPGLLH*QGQQWE
Trigger: CTCCCACTGCTGTCCCTGGCAGTGCAGAAGTCCAGG...AACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTTGAGCCCATCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR CCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCCAGCAGGGCAGAAGACTGCAACAGCAGATGGGCTCTaGAGCAAATCTTCAGGTGGT +
Preference number: 2 (lower is better)
Translates to: CCCCCCCCCCCPAGQKTATADGL*SKSSGG
Trigger: ACCACCTGAAGATTTGCTCCAGAGCCCATCTGCTGT...TGCAGTCTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR CCA 90 bp GACTGCAGTGGCCGGGTGTCCAGTGTTGTTGGGCCCAGTGGGAGTGAACTGAGCTGTAGAAACAGCAGATaGGCTCTGGAGCAAATCTTC +
Preference number: 2 (lower is better)
Translates to: DCSGRVSSVVGPSGSELSCRNSR*ALEQIF
Trigger: GAAGATTTGCTCCAGAGCCCATCTGCTGTTTCTACA...GCTCAGTTCACTCCCACTGGGCCCAACAACACTGGACACCCGGCCACTGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR GCA 90 bp AAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTGCTGCTCATTCCCTGGACTTCTaGACTGCCAGGGACAGCAGT +
Preference number: 2 (lower is better)
Translates to: KGGRRVGSGRTAAVTVAAHSLDF*TARDSS
Trigger: ACTGCTGTCCCTGGCAGTGCAGAAGTCCAGGGAATG...AGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR GCA 90 bp CACACTCTTCAGGTGAATCTGGTACTTCTTCTGCCCATTGAGACCCTCTGGGATTCTTGCTCCCGCTGCTaGAGCTCCTCGATCTCTGCC +
Preference number: 2 (lower is better)
Translates to: HTLQVNLVLLLPIETLWDSCSRC*SSSISA
Trigger: GGCAGAGATCGAGGAGCTGCAGCAGCGGGAGCAAGA...ATCCCAGAGGGTCTCAATGGGCAGAAGAAGTACCAGATTCACCTGAAGAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
3UTR-3UTR CCA 90 bp GTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTGCTGCTGCTGCTGACAGCAGATGGGCTCTaGAGCAAATCTTCAGGTGGT +
Preference number: 2 (lower is better)
Translates to: VEGLGPDELLLLLLLLLLTADGL*SKSSGG
Trigger: ACCACCTGAAGATTTGCTCCAGAGCCCATCTGCTGT...CAGCAGCAGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR CCA 90 bp CACACTCTTCAGGTGAATCTGGTACTTCTTCTGCCCATTGAGACCCTCTGGGATCTGATGGGGCCCGGATaGCCAAGAGGGTATCTCCAG +
Preference number: 2 (lower is better)
Translates to: HTLQVNLVLLLPIETLWDLMGPG*PRGYLQ
Trigger: CTGGAGATACCCTCTTGGCCATCCGGGCCCCATCAG...ATCCCAGAGGGTCTCAATGGGCAGAAGAAGTACCAGATTCACCTGAAGAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565849.5
3UTR-3UTR TCA 90 bp CACACTCTTCAGGTGAATCTGGTACTTCTTCTGCCCATTGAGACCCTCTGGGATTCTGCACGTCCTCTGTaGCGTTCCGGATGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: HTLQVNLVLLLPIETLWDSARPL*RSGCSA
Trigger: AGCAGAGCATCCGGAACGTCACAGAGGACGTGCAGA...ATCCCAGAGGGTCTCAATGGGCAGAAGAAGTACCAGATTCACCTGAAGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
3UTR-3UTR GCA 90 bp TGTTCACCAGCAGAACCTCAATGGGACCACTCACACTCTTCAGGTGAATCTGGTTGCTGGTCTAGTTCTTaGTCCCGCTGCTGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: CSPAEPQWDHSHSSGESGCWSSS*SRCCSS
Trigger: GGAGCTGCAGCAGCGGGAGCAAGAACTAGACCAGCA...ACCAGATTCACCTGAAGAGTGTGAGTGGTCCCATTGAGGTTCTGCTGGTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
3UTR-3UTR GCA 90 bp ATGAGTGACGTAGGCCAAACAGCTGTTCTGCACGTCCTCTGTGACGTTCCGGATTGCACCCACACCTTGTaGTGGTCTAGTTCTTGCTCC +
Preference number: 2 (lower is better)
Translates to: MSDVGQTAVLHVLCDVPDCTHTL*WSSSCS
Trigger: GGAGCAAGAACTAGACCAGCACAAGGTGTGGGTGCA...ATCCGGAACGTCACAGAGGACGTGCAGAACAGCTGTTTGGCCTACGTCACTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
3UTR-3UTR GCA 90 bp CACACTCTTCAGGTGAATCTGGTACTTCTTCTGCCCATTGAGACCCTCTGGGATAGTTCTTGCTCCCGCTaGTGCAGCTCCTCGATCTCT +
Preference number: 2 (lower is better)
Translates to: HTLQVNLVLLLPIETLWDSSCSR*CSSSIS
Trigger: AGAGATCGAGGAGCTGCAGCAGCGGGAGCAAGAACT...ATCCCAGAGGGTCTCAATGGGCAGAAGAAGTACCAGATTCACCTGAAGAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
3UTR-3UTR CCA 90 bp CACACTCTTCAGGTGAATCTGGTACTTCTTCTGCCCATTGAGACCCTCTGGGATCAAATCTTCAGGTGGTaGCACAGGCACAGCCACAGG +
Preference number: 2 (lower is better)
Translates to: HTLQVNLVLLLPIETLWDQIFRW*HRHSHR
Trigger: CCTGTGGCTGTGCCTGTGCCACCACCTGAAGATTTG...ATCCCAGAGGGTCTCAATGGGCAGAAGAAGTACCAGATTCACCTGAAGAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
3UTR-3UTR GCA 90 bp CACACTCTTCAGGTGAATCTGGTACTTCTTCTGCCCATTGAGACCCTCTGGGATGCCAAACAGCTGTTCTaGACGTCCTCTGTGACGTTC +
Preference number: 2 (lower is better)
Translates to: HTLQVNLVLLLPIETLWDAKQLF*TSSVTF
Trigger: GAACGTCACAGAGGACGTGCAGAACAGCTGTTTGGC...ATCCCAGAGGGTCTCAATGGGCAGAAGAAGTACCAGATTCACCTGAAGAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
3UTR-3UTR CCA 90 bp AAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTGCTGCTTGTAGAAACAGCAGATaGGCTCTGGAGCAAATCTTC +
Preference number: 2 (lower is better)
Translates to: KGGRRVGSGRTAAVTVAACRNSR*ALEQIF
Trigger: GAAGATTTGCTCCAGAGCCCATCTGCTGTTTCTACA...AGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR CAA 90 bp GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCCAGCAGGGCAGAAGACTGCAGGCCGGGTGTCCAGTGTaGTTGGGCCCAGTGGGAGTG +
Preference number: 3 (lower is better)
Translates to: AAAAAAAAAAVQQGRRLQAGCPV*LGPVGV
Trigger: CACTCCCACTGGGCCCAACAACACTGGACACCCGGC...CTGCAGTCTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR GCA 72 bp CTGCTGCTGCTGCTGCTGTCCAGCAGGGCAGAAGACTaGAGTGGCCGGGTGTCCAGTGTTGTTGGGCCCAGT +
Preference number: 3 (lower is better)
Translates to: LLLLLLSSRAED*SGRVSSVVGPS
Trigger: ACTGGGCCCAACAACACTGGACACCCGGCCACTGCAGTCTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR CCA 72 bp CACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTaGGCACGTGAGAGGGCCAGGAGGAGCTGGAGGGTC +
Preference number: 3 (lower is better)
Translates to: HLQVLGLKAQQK*ARERARRSWRV
Trigger: GACCCTCCAGCTCCTCCTGGCCCTCTCACGTGCCCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR CCA 72 bp AGTCCCAGGGCCGCCACTCACTGTGATCTCAGCTGCTaGGCCAGCCATTCCCTGGACTTCTGCACTGCCAGG +
Preference number: 3 (lower is better)
Translates to: SPRAATHCDLSC*ASHSLDFCTAR
Trigger: CCTGGCAGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGCGGCCCTGGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR GCA 72 bp GATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTaGACTGCCAGGGACAGCAGTGGGAGTGAGCTGAGG +
Preference number: 3 (lower is better)
Translates to: DLSCWASHSLDF*TARDSSGSELR
Trigger: CCTCAGCTCACTCCCACTGCTGTCCCTGGCAGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR GCA 72 bp AAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: KGWVRTNCCCYC*CCCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR CCA 72 bp CTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTaGACTTCTGCACTGCCAGGGACAGCAGTGGGAGTG +
Preference number: 3 (lower is better)
Translates to: LTVISAAGPAIP*TSALPGTAVGV
Trigger: CACTCCCACTGCTGTCCCTGGCAGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR GCA 72 bp TGTTACTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGTCCAGCAGGGCAGAAGACTGCA +
Preference number: 3 (lower is better)
Translates to: CYCCCCCCCCCC*CCCCPAGQKTA
Trigger: TGCAGTCTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGTAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR CAA 90 bp ATGGGCTCAAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGAGCTCACCACTGTCCTaGCTATCAGTCCCAGGGCCG +
Preference number: 3 (lower is better)
Translates to: MGSKEVEGLGPDELLLLLSSPLS*LSVPGP
Trigger: CGGCCCTGGGACTGATAGCAAGGACAGTGGTGAGCT...CAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTTGAGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR-3UTR CAA 90 bp ATGAGTGACGTAGGCCAAACAGCTGTTCTGCACGTCCTCTGTGACGTTCCGGATTGCTGCACCCACACCTaGTGCTGGTCTAGTTCTTGC +
Preference number: 3 (lower is better)
Translates to: MSDVGQTAVLHVLCDVPDCCTHT*CWSSSC
Trigger: GCAAGAACTAGACCAGCACAAGGTGTGGGTGCAGCA...ATCCGGAACGTCACAGAGGACGTGCAGAACAGCTGTTTGGCCTACGTCACTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
3UTR TCA 72 bp AGCAGAACCTCAATGGGACCACTCACACTCTTCAGGTaGATCTGGTACTTCTTCTGCCCATTGAGACCCTCT +
Preference number: 3 (lower is better)
Translates to: SRTSMGPLTLFR*IWYFFCPLRPS
Trigger: AGAGGGTCTCAATGGGCAGAAGAAGTACCAGATTCACCTGAAGAGTGTGAGTGGTCCCATTGAGGTTCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR CCA 90 bp GTCCCAGGGCCGCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGCTTTTCGTGCCGGCTTaGAGTGCCCGGGGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: VPGPPLTVISAAGPAIPWLFVPA*SARGRR
Trigger: CCGCCGCCCCCGGGCACTCCAAGCCGGCACGAAAAG...CCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGCGGCCCTGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp GGGTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACCTTTTCGTGCCGGCTTaGAGTGCCCGGGGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GLWGSRRWGQSSGLDHPDLFVPA*SARGRR
Trigger: CCGCCGCCCCCGGGCACTCCAAGCCGGCACGAAAAG...GTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp GGTAGCCGCCCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGGCACCTCCAGGCTGGTaGCTGATGGGGCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: GSRPHHLQVLGLKAQQKWAPPGW*LMGPGW
Trigger: CCATCCGGGCCCCATCAGGCACCAGCCTGGAGGTGC...CCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGGGCGGCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp GGTAGCCGCCCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGTGGGCACCTCCAGGCTaGTGCCTGATGGGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: GSRPHHLQVLGLKAQQKWWAPPG*CLMGPG
Trigger: TCCGGGCCCCATCAGGCACCAGCCTGGAGGTGCCCA...CCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGGGCGGCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp GGTAGCCGCCCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGCCCAGGCTCTTTTCGTaGCGGCTTGGAGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GSRPHHLQVLGLKAQQKWPRLFS*RLGVPG
Trigger: CCCGGGCACTCCAAGCCGGCACGAAAAGAGCCTGGG...CCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGGGCGGCTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp ACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTGCCAGGGCTTTTCGTGCCGGCTTaGAGTGCCCGGGGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: TVISAAGPAIPWTSALPGLFVPA*SARGRR
Trigger: CCGCCGCCCCCGGGCACTCCAAGCCGGCACGAAAAG...CCCTGGCAGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp GACTGCAGTGGCCGGGTGTCCAGTGTTGTTGGGCCCAGTGGGAGTGAACTGAGCTGGGCACCTCCAGGCTaGTGCCTGATGGGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: DCSGRVSSVVGPSGSELSWAPPG*CLMGPG
Trigger: TCCGGGCCCCATCAGGCACCAGCCTGGAGGTGCCCA...GCTCAGTTCACTCCCACTGGGCCCAACAACACTGGACACCCGGCCACTGCAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR TCA 90 bp CCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCTAGCCAGAACTGTGCGGTaGGGGGAGGCCGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PQRPLFLLGSRPHHLQVLARTVR*GEAGEA
Trigger: GGCTTCTCCGGCCTCCCCTCACCGCACAGTTCTGGC...TAGAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp GGGTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACAGCTCCTCGGTTCTGTaGCACTGGGTGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: GLWGSRRWGQSSGLDHPDSSSVL*HWVAAE
Trigger: CTCGGCTGCCACCCAGTGGCACAGAACCGAGGAGCT...GTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp ACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTGCCAGGGTGGGCACCTCCAGGCTaGTGCCTGATGGGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: TVISAAGPAIPWTSALPGWAPPG*CLMGPG
Trigger: TCCGGGCCCCATCAGGCACCAGCCTGGAGGTGCCCA...CCCTGGCAGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp CTCCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCGAGGCTTCCTGGGACTaGGCTAGGGCAGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LPRDLCSFLVAAPTTCRFEASWD*ARAGLG
Trigger: GCCCAAGCCTGCCCTAGCCCAGTCCCAGGAAGCCTC...GAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCCAGCAGGGCAGAAGACTGCAGTGAGGCTTCCTGGGACTaGGCTAGGGCAGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LLLLLLLLLLSSRAEDCSEASWD*ARAGLG
Trigger: GCCCAAGCCTGCCCTAGCCCAGTCCCAGGAAGCCTC...ACTGCAGTCTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp GGGTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCTGTAGGGGTCGGGTaGGAGAGGTCCCCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: GLWGSRRWGQSSGLDHPDSVGVG*ERSPGN
Trigger: GTTGCCTGGGGACCTCTCCCACCCGACCCCTACAGA...GTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp CCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCTACAGCCGAGCCTGGGCTaGCGAAGGCCGCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PQRPLFLLGSRPHHLQVLQPSLG*RRPQKG
Trigger: CCCTTTCTGCGGCCTTCGCCAGCCCAGGCTCGGCTG...TAGAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR TCA 90 bp GTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCACGGTGATGGGGGCTaGGTCCTGTTCCCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VMGQQEVGPIIRAGPPRLHGDGG*VLFPCS
Trigger: AGAGCAGGGGAACAGGACTCAGCCCCCATCACCGTG...GAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp ATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCTCTCTTGCTCCCGCTGCTaGAGCTCCTCGATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: MGQQEVGPIIRAGPPRLLSCSRC*SSSISA
Trigger: GGCAGAGATCGAGGAGCTGCAGCAGCGGGAGCAAGA...GAGGAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp ACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTGCCGCACCTCCAGGCTGGTaGCTGATGGGGCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: THCDLSCWASHSLDFCTAAPPGW*LMGPGW
Trigger: CCATCCGGGCCCCATCAGGCACCAGCCTGGAGGTGC...GGCAGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCCAGCAGGGCAGAAGACTGCAGGCTCACCACTGTCCTTaGTATCAGTCCCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: AAAAAAAAAAVQQGRRLQAHHCP*YQSQGR
Trigger: GCGGCCCTGGGACTGATAGCAAGGACAGTGGTGAGC...CTGCAGTCTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp GGTAGCCGCCCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGAGCAGGGCAGAAGACTaGAGTGGCCGGGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GSRPHHLQVLGLKAQQKWSRAED*SGRVSS
Trigger: ACTGGACACCCGGCCACTGCAGTCTTCTGCCCTGCT...CCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGGGCGGCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp CCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGGCACGTGAGTGCTGCTGCTGCTGCTaGTGCTGTCCAGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PHHLQVLGLKAQQKWARECCCCC*CCPAGQ
Trigger: CTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCA...CTCACGTGCCCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCCAGCAGGGCAGAAGACTGCATGCTGCTGCTGCTGCTaGTGCTGTCCAGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: CCCCCCCCCCCPAGQKTACCCCC*CCPAGQ
Trigger: CTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCA...TGCAGTCTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp GGTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCTGCGAGCACAGAAGTaGCAGCACAGGAGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: GYGAAGGGANHQGWTTQTLRAQK*QHRSGS
Trigger: GCTCCCGCTCCTGTGCTGGCACTTCTGTGCTCGCAG...AGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp GGTAGCCGCCCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGAGTGGTGCTGGCATGTaGCCAGTTCCACCCCACCCT +
Preference number: 4 (lower is better)
Translates to: GSRPHHLQVLGLKAQQKWSGAGM*PVPPHP
Trigger: AGGGTGGGGTGGAACTGGGCACATGCCAGCACCACT...CCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGGGCGGCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp GGGTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACGTGGTCTCCCGGGGGTaGAGAAAGACGAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GLWGSRRWGQSSGLDHPDVVSRG*RKTKQR
Trigger: CCTCTGCTTCGTCTTTCTCCACCCCCGGGAGACCAC...GTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp CCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGGCACGTGAGAAGGCCCAGCAGAAGTaGGCACGTGAGAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PHHLQVLGLKAQQKWAREKAQQK*ARERAR
Trigger: CCTGGCCCTCTCACGTGCCCACTTCTGCTGGGCCTT...CTCACGTGCCCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp TATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCTTGGGGCAGCAGGAGGTaGGGCCAATCATCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: YGAAGGGANHQGWTTQTPWGSRR*GQSSGL
Trigger: CAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCA...AGGAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp GTCCCAGGGCCGCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGCTGATGGGGCCCGGATaGCCAAGAGGGTATCTCTTC +
Preference number: 4 (lower is better)
Translates to: VPGPPLTVISAAGPAIPWLMGPG*PRGYLF
Trigger: GAAGAGATACCCTCTTGGCCATCCGGGCCCCATCAG...CCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGCGGCCCTGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569573.1
CDS-3UTR TCA 90 bp GGGTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACACTTTGGCTCCACGGTaGTGGGGGCTGAGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: GLWGSRRWGQSSGLDHPDTLAPR*WGLSPV
Trigger: AACAGGACTCAGCCCCCATCACCGTGGAGCCAAAGT...GTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp GCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTCCCAGGCTCTTTTCGTaGCGGCTTGGAGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: ATHCDLSCWASHSLDFCTPRLFS*RLGVPG
Trigger: CCCGGGCACTCCAAGCCGGCACGAAAAGAGCCTGGG...AGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp TGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCTCCAGTTCTTGCTCCCGCTaGTGCAGCTCCTCGATCTCT +
Preference number: 4 (lower is better)
Translates to: WGSRRWGQSSGLDHPDSSSSCSR*CSSSIS
Trigger: AGAGATCGAGGAGCTGCAGCAGCGGGAGCAAGAACT...GGAGGAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp CTCCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCCCTGGACTTCTGCACTaGCAGGGACAGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPRDLCSFLVAAPTTCRFPGLLH*QGQQWE
Trigger: CTCCCACTGCTGTCCCTGGCAGTGCAGAAGTCCAGG...GAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp GTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCGCTCACCACTGTCCTTaGTATCAGTCCCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: VMGQQEVGPIIRAGPPRLAHHCP*YQSQGR
Trigger: GCGGCCCTGGGACTGATAGCAAGGACAGTGGTGAGC...GAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp CTCCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCTGCTGCTGCTGCTGCTaGTGTCCAGCAGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LPRDLCSFLVAAPTTCRFCCCCC*CPAGQK
Trigger: CTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCA...GAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp TATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCTCTGATGGGGCCCGGATaGCCAAGAGGGTATCTCCAG +
Preference number: 4 (lower is better)
Translates to: YGAAGGGANHQGWTTQTPLMGPG*PRGYLQ
Trigger: CTGGAGATACCCTCTTGGCCATCCGGGCCCCATCAG...AGGAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCCAGCAGGGCAGAAGACTGCAGTCCCATTGAGACCCTCTaGGATGGGCACCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LLLLLLLLLLSSRAEDCSPIETL*DGHLQA
Trigger: AGCCTGGAGGTGCCCATCCCAGAGGGTCTCAATGGG...ACTGCAGTCTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCCAGCAGGGCAGAAGACTGCACCCATTGAGACCCTCTaGGATGGGCACCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: CCCCCCCCCCCPAGQKTAPIETL*DGHLQA
Trigger: AGCCTGGAGGTGCCCATCCCAGAGGGTCTCAATGGG...TGCAGTCTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp GTCCCAGGGCCGCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGCAAATCTTCAGGTGGTaGCACAGGCACAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: VPGPPLTVISAAGPAIPWQIFRW*HRHSHR
Trigger: CCTGTGGCTGTGCCTGTGCCACCACCTGAAGATTTG...CCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGCGGCCCTGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp CCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTGGAGGCTTCCTGGGACTaGGCTAGGGCAGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PLTVISAAGPAIPWTSALEASWD*ARAGLG
Trigger: GCCCAAGCCTGCCCTAGCCCAGTCCCAGGAAGCCTC...CAGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp GGGTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACAGACACTGCCCCCTATaGGGGGTAATGGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GLWGSRRWGQSSGLDHPDRHCPL*GVMAAP
Trigger: AGGAGCTGCCATTACCCCCCATAGGGGGCAGTGTCT...GTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp CCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGGCACGTGAGGCCAATCATCAGGGCTaGACCACCCAGACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PHHLQVLGLKAQQKWAREANHQG*TTQTPP
Trigger: GGGAGGAGTCTGGGTGGTCCAGCCCTGATGATTGGC...CTCACGTGCCCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR CAA 72 bp GGACGTGAGGCTTCCTGGGACTGGGCTAGGGCAGGCTaGGGCAGAGGTGGAGGTGTAGAAACAGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: GREASWDWARAG*GRGGGVETADG
Trigger: CCCATCTGCTGTTTCTACACCTCCACCTCTGCCCAAGCCTGCCCTAGCCCAGTCCCAGGAAGCCTCACGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR TCA 90 bp CTCCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCTCTGCACGTCCTCTGTaGCGTTCCGGATGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LPRDLCSFLVAAPTTCRFSARPL*RSGCSA
Trigger: AGCAGAGCATCCGGAACGTCACAGAGGACGTGCAGA...GAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR TCA 90 bp GGTAGCCGCCCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGACTTCTTCTGCCCATTaGGACCCTCTGGGATGGGCA +
Preference number: 4 (lower is better)
Translates to: GSRPHHLQVLGLKAQQKWTSSAH*DPLGWA
Trigger: TGCCCATCCCAGAGGGTCTCAATGGGCAGAAGAAGT...CCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGGGCGGCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp GGTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTTGCTGGTCTAGTTCTTaGTCCCGCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GYGAAGGGANHQGWTTQTCWSSS*SRCCSS
Trigger: GGAGCTGCAGCAGCGGGAGCAAGAACTAGACCAGCA...AGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp CCGCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACCTGGACTTCTGCACTaGCAGGGACAGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PPLTVISAAGPAIPWTSAPGLLH*QGQQWE
Trigger: CTCCCACTGCTGTCCCTGGCAGTGCAGAAGTCCAGG...TGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp GGGTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACCATTCCCTGGACTTCTaGACTGCCAGGGACAGCAGT +
Preference number: 4 (lower is better)
Translates to: GLWGSRRWGQSSGLDHPDHSLDF*TARDSS
Trigger: ACTGCTGTCCCTGGCAGTGCAGAAGTCCAGGGAATG...GTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp GGGTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACGTCCGGACGAACTGCTaGTGTTACTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLWGSRRWGQSSGLDHPDVRTNC*CYCCCC
Trigger: GCAGCAGCAACAGTAACAGCAGCAGTTCGTCCGGAC...GTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp CCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCTACCTGTTCCCCTGCTCTaGGAGCACAGAAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PQRPLFLLGSRPHHLQVLPVPLL*EHRSAS
Trigger: GCTGGCACTTCTGTGCTCGCAGAGCAGGGGAACAGG...TAGAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp CACCCTTCCCTCCTAGGGGAAGGAGCTGGCAGAAGCAAGACACTGAGGCTGGCACCCATTGAGACCCTCTaGGATGGGCACCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: HPSLLGEGAGRSKTLRLAPIETL*DGHLQA
Trigger: AGCCTGGAGGTGCCCATCCCAGAGGGTCTCAATGGG...TGCCAGCCTCAGTGTCTTGCTTCTGCCAGCTCCTTCCCCTAGGAGGGAAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp GGTAGCCGCCCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGCAAATCTTCAGGTGGTaGCACAGGCACAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: GSRPHHLQVLGLKAQQKWQIFRW*HRHSHR
Trigger: CCTGTGGCTGTGCCTGTGCCACCACCTGAAGATTTG...CCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGGGCGGCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp CCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGGCACGTGAGGAAGCCAGGCGTCTGTaGCTCTCAAGCTCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: PHHLQVLGLKAQQKWAREEARRL*LSSSVG
Trigger: CCCTACAGAGCTTGAGAGCCACAGACGCCTGGCTTC...CTCACGTGCCCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp GGTAGCCGCCCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGCCTAGGGGAAGGAGCTaGCAGAAGCAAGACACTGAG +
Preference number: 4 (lower is better)
Translates to: GSRPHHLQVLGLKAQQKWPRGRS*QKQDTE
Trigger: CTCAGTGTCTTGCTTCTGCCAGCTCCTTCCCCTAGG...CCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGGGCGGCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
3UTR CAA 72 bp GAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTaGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EGLGPDELLLLL*LLLLLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR TCA 90 bp GACTGCAGTGGCCGGGTGTCCAGTGTTGTTGGGCCCAGTGGGAGTGAACTGAGCACTTCTTCTGCCCATTaGGACCCTCTGGGATGGGCA +
Preference number: 4 (lower is better)
Translates to: DCSGRVSSVVGPSGSELSTSSAH*DPLGWA
Trigger: TGCCCATCCCAGAGGGTCTCAATGGGCAGAAGAAGT...GCTCAGTTCACTCCCACTGGGCCCAACAACACTGGACACCCGGCCACTGCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR TCA 90 bp CCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCTAAGGACTATTTGGACGTaGGGCTTCCTGGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: PQRPLFLLGSRPHHLQVLRTIWT*GFLGLG
Trigger: GCCCAGTCCCAGGAAGCCTCACGTCCAAATAGTCCT...TAGAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR TCA 90 bp CCGCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCAAGGACTATTTGGACGTaGGGCTTCCTGGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: PPLTVISAAGPAIPWTSARTIWT*GFLGLG
Trigger: GCCCAGTCCCAGGAAGCCTCACGTCCAAATAGTCCT...TGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR TCA 90 bp GGTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTGCAGTGGGAGTGAGCTaGGGACTATTTGGACGTGAG +
Preference number: 4 (lower is better)
Translates to: GYGAAGGGANHQGWTTQTAVGVS*GLFGRE
Trigger: CTCACGTCCAAATAGTCCTCAGCTCACTCCCACTGC...AGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR TCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCCAGCAGGGCAGAAGACTGCAGCAGTGGGAGTGAGCTaGGGACTATTTGGACGTGAG +
Preference number: 4 (lower is better)
Translates to: CCCCCCCCCCCPAGQKTAAVGVS*GLFGRE
Trigger: CTCACGTCCAAATAGTCCTCAGCTCACTCCCACTGC...TGCAGTCTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR TCA 90 bp CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCCAGCAGGGCAGAAGACTGCAGTGGACAGCAGTGGGAGTaGGCTGAGGACTATTTGGAC +
Preference number: 4 (lower is better)
Translates to: LLLLLLLLLLSSRAEDCSGQQWE*AEDYLD
Trigger: GTCCAAATAGTCCTCAGCTCACTCCCACTGCTGTCC...ACTGCAGTCTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR TCA 90 bp TATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCTGCAGAAGCAAGACACTaGGGCTGGCAGGAACAAGAC +
Preference number: 4 (lower is better)
Translates to: YGAAGGGANHQGWTTQTPAEARH*GWQEQD
Trigger: GTCTTGTTCCTGCCAGCCTCAGTGTCTTGCTTCTGC...AGGAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR TCA 90 bp GTCCCAGGGCCGCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGAGATGTCCTCATGAGTaGCGTAGGCCAAAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: VPGPPLTVISAAGPAIPWRCPHE*RRPKCE
Trigger: CTCACACTTTGGCCTACGTCACTCATGAGGACATCT...CCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGCGGCCCTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568839.5
CDS-3UTR GCA 90 bp ATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCTCTGCACCCACACCTTGTaGTGGTCTAGTTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: MGQQEVGPIIRAGPPRLLCTHTL*WSSSCS
Trigger: GGAGCAAGAACTAGACCAGCACAAGGTGTGGGTGCA...GAGGAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp GGTAGCCGCCCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGGCCAAACAGCTGTTCTaGACGTCCTCTGTGACGTTC +
Preference number: 4 (lower is better)
Translates to: GSRPHHLQVLGLKAQQKWAKQLF*TSSVTF
Trigger: GAACGTCACAGAGGACGTGCAGAACAGCTGTTTGGC...CCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGGGCGGCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp ATGAGTGACGTAGGCCAAACAGCTGTTCTGCACGTCCTCTGTGACGTTCCGGATGCACCTCCAGGCTGGTaGCTGATGGGGCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: MSDVGQTAVLHVLCDVPDAPPGW*LMGPGW
Trigger: CCATCCGGGCCCCATCAGGCACCAGCCTGGAGGTGC...ATCCGGAACGTCACAGAGGACGTGCAGAACAGCTGTTTGGCCTACGTCACTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR GCA 90 bp AAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTGCTGCTGCACCTCCAGGCTGGTaGCTGATGGGGCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: KGGRRVGSGRTAAVTVAAAPPGW*LMGPGW
Trigger: CCATCCGGGCCCCATCAGGCACCAGCCTGGAGGTGC...AGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp ACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTGCCCCTGGACTTCTGCACTaGCAGGGACAGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: THCDLSCWASHSLDFCTAPGLLH*QGQQWE
Trigger: CTCCCACTGCTGTCCCTGGCAGTGCAGAAGTCCAGG...GGCAGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp GGGCCGCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTCATTCCCTGGACTTCTaGACTGCCAGGGACAGCAGT +
Preference number: 4 (lower is better)
Translates to: GPPLTVISAAGPAIPWTSHSLDF*TARDSS
Trigger: ACTGCTGTCCCTGGCAGTGCAGAAGTCCAGGGAATG...AGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGCGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp CACCCTTCCCTCCTAGGGGAAGGAGCTGGCAGAAGCAAGACACTGAGGCTGGCACACTGTGATCTCAGCTaGTGGGCCAGCCATTCCCTG +
Preference number: 4 (lower is better)
Translates to: HPSLLGEGAGRSKTLRLAHCDLS*WASHSL
Trigger: CAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTG...TGCCAGCCTCAGTGTCTTGCTTCTGCCAGCTCCTTCCCCTAGGAGGGAAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp GGGAGTGAACTGAGCTCACCACTGTCCTTGCTATCAGTCCCAGGGCCGCCACTCCACTGTGATCTCAGCTaGTGGGCCAGCCATTCCCTG +
Preference number: 4 (lower is better)
Translates to: GSELSSPLSLLSVPGPPLHCDLS*WASHSL
Trigger: CAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTG...GAGTGGCGGCCCTGGGACTGATAGCAAGGACAGTGGTGAGCTCAGTTCACTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp CCACTGTCCTTGCTATCAGTCCCAGGGCCGCCACTCACTGTGATCTCAGCTGCTAGCAGGGCAGAAGACTaGAGTGGCCGGGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PLSLLSVPGPPLTVISAASRAED*SGRVSS
Trigger: ACTGGACACCCGGCCACTGCAGTCTTCTGCCCTGCT...AGCAGCTGAGATCACAGTGAGTGGCGGCCCTGGGACTGATAGCAAGGACAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp GCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTAGCAGGGCAGAAGACTaGAGTGGCCGGGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: ATHCDLSCWASHSLDFCTSRAED*SGRVSS
Trigger: ACTGGACACCCGGCCACTGCAGTCTTCTGCCCTGCT...AGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp ACTGTCCTTGCTATCAGTCCCAGGGCCGCCACTCACTGTGATCTCAGCTGCTGGTGCTGCTGCTGCTGCTaGTGTCCAGCAGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TVLAISPRAATHCDLSCWCCCCC*CPAGQK
Trigger: CTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCA...CCAGCAGCTGAGATCACAGTGAGTGGCGGCCCTGGGACTGATAGCAAGGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp GGGCCGCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGTCCGGACGAACTGCTaGTGTTACTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPPLTVISAAGPAIPWTSVRTNC*CYCCCC
Trigger: GCAGCAGCAACAGTAACAGCAGCAGTTCGTCCGGAC...AGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGCGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp CCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGGCACGTGAGGAGCAAATCTTCAGGTaGTGGCACAGGCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: PHHLQVLGLKAQQKWAREEQIFR*WHRHSH
Trigger: GTGGCTGTGCCTGTGCCACCACCTGAAGATTTGCTC...CTCACGTGCCCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp CACCCTTCCCTCCTAGGGGAAGGAGCTGGCAGAAGCAAGACACTGAGGCTGGCAGGCAGAAGACTGCAGTaGCCGGGTGTCCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: HPSLLGEGAGRSKTLRLAGRRLQ*PGVQCC
Trigger: ACAACACTGGACACCCGGCCACTGCAGTCTTCTGCC...TGCCAGCCTCAGTGTCTTGCTTCTGCCAGCTCCTTCCCCTAGGAGGGAAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp CCGCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCAGGCAGAAGACTGCAGTaGCCGGGTGTCCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: PPLTVISAAGPAIPWTSAGRRLQ*PGVQCC
Trigger: ACAACACTGGACACCCGGCCACTGCAGTCTTCTGCC...TGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
3UTR CAA 72 bp TCTGTGACGTTCCGGATGCTCTGCTGCACCCACACCTaGTGCTGGTCTAGTTCTTGCTCCCGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SVTFRMLCCTHT*CWSSSCSRCCS
Trigger: GCTGCAGCAGCGGGAGCAAGAACTAGACCAGCACAAGGTGTGGGTGCAGCAGAGCATCCGGAACGTCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR TCA 90 bp CACCCTTCCCTCCTAGGGGAAGGAGCTGGCAGAAGCAAGACACTGAGGCTGGCAGGACAGCAGTGGGAGTaGGCTGAGGACTATTTGGAC +
Preference number: 4 (lower is better)
Translates to: HPSLLGEGAGRSKTLRLAGQQWE*AEDYLD
Trigger: GTCCAAATAGTCCTCAGCTCACTCCCACTGCTGTCC...TGCCAGCCTCAGTGTCTTGCTTCTGCCAGCTCCTTCCCCTAGGAGGGAAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR TCA 90 bp CTCCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCAGGGGCAAACACTTCTaGGGACATCAACTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LPRDLCSFLVAAPTTCRFRGKHF*GHQLLQ
Trigger: CTGGAGGAGTTGATGTCCTCAGAAGTGTTTGCCCCT...GAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp ATGAGTGACGTAGGCCAAACAGCTGTTCTGCACGTCCTCTGTGACGTTCCGGATCCCAGGCTCTTTTCGTaGCGGCTTGGAGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: MSDVGQTAVLHVLCDVPDPRLFS*RLGVPG
Trigger: CCCGGGCACTCCAAGCCGGCACGAAAAGAGCCTGGG...ATCCGGAACGTCACAGAGGACGTGCAGAACAGCTGTTTGGCCTACGTCACTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR GCA 90 bp AAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTGCTGCTCCCAGGCTCTTTTCGTaGCGGCTTGGAGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: KGGRRVGSGRTAAVTVAAPRLFS*RLGVPG
Trigger: CCCGGGCACTCCAAGCCGGCACGAAAAGAGCCTGGG...AGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp ATGGGCTCAAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTGCTGCTGCTGCTGCTaGTGCTGTCCAGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: MGSKEVEGLGPDELLLLLCCCCC*CCPAGQ
Trigger: CTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCA...CAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTTGAGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp TATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCTAACACCTGTGGGGTCTaGCTTGATGGGCTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: YGAAGGGANHQGWTTQTPNTCGV*LDGLKG
Trigger: TCCTTTGAGCCCATCAAGGCAGACCCCACAGGTGTT...AGGAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp TGCAGTGGCCGGGTGTCCAGTGTTGTTGGGCCCAGTGGGAGTGAACTGAGCTCAACCACCTGTGGGGTCTaGCTTGATGGGCTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: CSGRVSSVVGPSGSELSSTTCGV*LDGLKG
Trigger: TCCTTTGAGCCCATCAAGGCAGACCCCACAGGTGGT...TGAGCTCAGTTCACTCCCACTGGGCCCAACAACACTGGACACCCGGCCACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp TGTTCACCAGCAGAACCTCAATGGGACCACTCACACTCTTCAGGTGAATCTGGTCTTTTCGTGCCGGCTTaGAGTGCCCGGGGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: CSPAEPQWDHSHSSGESGLFVPA*SARGRR
Trigger: CCGCCGCCCCCGGGCACTCCAAGCCGGCACGAAAAG...ACCAGATTCACCTGAAGAGTGTGAGTGGTCCCATTGAGGTTCTGCTGGTGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR CCA 90 bp ACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTGCCAGGGGAGCAAATCTTCAGGTaGTGGCACAGGCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: TVISAAGPAIPWTSALPGEQIFR*WHRHSH
Trigger: GTGGCTGTGCCTGTGCCACCACCTGAAGATTTGCTC...CCCTGGCAGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR TCA 90 bp GGTAGCCGCCCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGGGGATCAAAGATTTCTaGCAGCTCTTTGGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: GSRPHHLQVLGLKAQQKWGIKDF*QLFGEF
Trigger: GAACTCCCCAAAGAGCTGTCAGAAATCTTTGATCCC...CCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGGGCGGCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp CCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGGCACGTGAGATCTGGTACTTCTTCTaGCCATTGAGACCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PHHLQVLGLKAQQKWAREIWYFF*PLRPSG
Trigger: CCCAGAGGGTCTCAATGGGCAGAAGAAGTACCAGAT...CTCACGTGCCCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp GGGCTCAAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTGCTCACCACTGTCCTTaGTATCAGTCCCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: GLKGGRRVGSGRTAAVTVAHHCP*YQSQGR
Trigger: GCGGCCCTGGGACTGATAGCAAGGACAGTGGTGAGC...AACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTTGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp GGGCTCAAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTTGCTGCTGCTGCTGCTaGTGTCCAGCAGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GLKGGRRVGSGRTAAVTVCCCCC*CPAGQK
Trigger: CTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCA...AACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTTGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp GCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTGTCCGGACGAACTGCTaGTGTTACTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ATHCDLSCWASHSLDFCTVRTNC*CYCCCC
Trigger: GCAGCAGCAACAGTAACAGCAGCAGTTCGTCCGGAC...AGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp TGTTCACCAGCAGAACCTCAATGGGACCACTCACACTCTTCAGGTGAATCTGGTTGGGCACCTCCAGGCTaGTGCCTGATGGGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: CSPAEPQWDHSHSSGESGWAPPG*CLMGPG
Trigger: TCCGGGCCCCATCAGGCACCAGCCTGGAGGTGCCCA...ACCAGATTCACCTGAAGAGTGTGAGTGGTCCCATTGAGGTTCTGCTGGTGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR CCA 90 bp GACTGCAGTGGCCGGGTGTCCAGTGTTGTTGGGCCCAGTGGGAGTGAACTGAGCCCAGCAGAACCTCAATaGGACCACTCACACTCTTCA +
Preference number: 4 (lower is better)
Translates to: DCSGRVSSVVGPSGSELSPAEPQ*DHSHSS
Trigger: TGAAGAGTGTGAGTGGTCCCATTGAGGTTCTGCTGG...GCTCAGTTCACTCCCACTGGGCCCAACAACACTGGACACCCGGCCACTGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp CCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGGCACGTGAGACAGCAGATGGGCTCTaGAGCAAATCTTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PHHLQVLGLKAQQKWARETADGL*SKSSGG
Trigger: ACCACCTGAAGATTTGCTCCAGAGCCCATCTGCTGT...CTCACGTGCCCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp TGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCTCCTGTAGAAACAGCAGATaGGCTCTGGAGCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: WGSRRWGQSSGLDHPDSSCRNSR*ALEQIF
Trigger: GAAGATTTGCTCCAGAGCCCATCTGCTGTTTCTACA...GGAGGAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp GTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTGCTGCTGCTGCTGGGCAGAAGACTGCAGTaGCCGGGTGTCCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: VEGLGPDELLLLLLLLLLGRRLQ*PGVQCC
Trigger: ACAACACTGGACACCCGGCCACTGCAGTCTTCTGCC...CAGCAGCAGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR TCA 90 bp CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCCAGCAGGGCAGAAGACTGCAGTCTCACACTCTTCAGGTaGATCTGGTACTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLLLLLLLLLSSRAEDCSLTLFR*IWYFFC
Trigger: GCAGAAGAAGTACCAGATTCACCTGAAGAGTGTGAG...ACTGCAGTCTTCTGCCCTGCTGGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR TCA 90 bp CTTGATGGGCTCAAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTAGGACTATTTGGACGTaGGGCTTCCTGGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: LDGLKGGRRVGSGRTAAVRTIWT*GFLGLG
Trigger: GCCCAGTCCCAGGAAGCCTCACGTCCAAATAGTCCT...AACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTTGAGCCCATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR TCA 90 bp GTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTGCTGCTGCTGCTGGCAGTGGGAGTGAGCTaGGGACTATTTGGACGTGAG +
Preference number: 4 (lower is better)
Translates to: VEGLGPDELLLLLLLLLLAVGVS*GLFGRE
Trigger: CTCACGTCCAAATAGTCCTCAGCTCACTCCCACTGC...CAGCAGCAGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp CCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCTACCAGCAGAACCTCAATaGGACCACTCACACTCTTCA +
Preference number: 4 (lower is better)
Translates to: PQRPLFLLGSRPHHLQVLPAEPQ*DHSHSS
Trigger: TGAAGAGTGTGAGTGGTCCCATTGAGGTTCTGCTGG...TAGAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CCA 90 bp GTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTGCTGCTGCTGCTGCAAATCTTCAGGTGGTaGCACAGGCACAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: VEGLGPDELLLLLLLLLLQIFRW*HRHSHR
Trigger: CCTGTGGCTGTGCCTGTGCCACCACCTGAAGATTTG...CAGCAGCAGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp GTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTGCTGCTGCTGCTGGAGCAAATCTTCAGGTaGTGGCACAGGCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: VEGLGPDELLLLLLLLLLEQIFR*WHRHSH
Trigger: GTGGCTGTGCCTGTGCCACCACCTGAAGATTTGCTC...CAGCAGCAGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp ATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCTCTTTCTGACAGCTCTTTaGGGAGTTCCAAAACACCTG +
Preference number: 4 (lower is better)
Translates to: MGQQEVGPIIRAGPPRLLFLTAL*GVPKHL
Trigger: CAGGTGTTTTGGAACTCCCCAAAGAGCTGTCAGAAA...GAGGAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR TCA 90 bp ATGAGTGACGTAGGCCAAACAGCTGTTCTGCACGTCCTCTGTGACGTTCCGGATTCTGCACGTCCTCTGTaGCGTTCCGGATGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: MSDVGQTAVLHVLCDVPDSARPL*RSGCSA
Trigger: AGCAGAGCATCCGGAACGTCACAGAGGACGTGCAGA...ATCCGGAACGTCACAGAGGACGTGCAGAACAGCTGTTTGGCCTACGTCACTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR TCA 90 bp CACCCTTCCCTCCTAGGGGAAGGAGCTGGCAGAAGCAAGACACTGAGGCTGGCACTCACACTCTTCAGGTaGATCTGGTACTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: HPSLLGEGAGRSKTLRLALTLFR*IWYFFC
Trigger: GCAGAAGAAGTACCAGATTCACCTGAAGAGTGTGAG...TGCCAGCCTCAGTGTCTTGCTTCTGCCAGCTCCTTCCCCTAGGAGGGAAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR TCA 90 bp CTCCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCATGAAAAAGCCGAAATaGAGAGAGGGTTATGGGGCA +
Preference number: 4 (lower is better)
Translates to: LPRDLCSFLVAAPTTCRFMKKPK*REGYGA
Trigger: TGCCCCATAACCCTCTCTTCATTTCGGCTTTTTCAT...GAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR GCA 90 bp CCACTGTCCTTGCTATCAGTCCCAGGGCCGCCACTCACTGTGATCTCAGCTGCTATCTGGTACTTCTTCTaGCCATTGAGACCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PLSLLSVPGPPLTVISAAIWYFF*PLRPSG
Trigger: CCCAGAGGGTCTCAATGGGCAGAAGAAGTACCAGAT...AGCAGCTGAGATCACAGTGAGTGGCGGCCCTGGGACTGATAGCAAGGACAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp CCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTGATCTGGTACTTCTTCTaGCCATTGAGACCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PLTVISAAGPAIPWTSALIWYFF*PLRPSG
Trigger: CCCAGAGGGTCTCAATGGGCAGAAGAAGTACCAGAT...CAGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp GGGCTCAAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTCATTCCCTGGACTTCTaGACTGCCAGGGACAGCAGT +
Preference number: 4 (lower is better)
Translates to: GLKGGRRVGSGRTAAVTVHSLDF*TARDSS
Trigger: ACTGCTGTCCCTGGCAGTGCAGAAGTCCAGGGAATG...AACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTTGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp AAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTGCTGCTCACTGTGATCTCAGCTaGTGGGCCAGCCATTCCCTG +
Preference number: 4 (lower is better)
Translates to: KGGRRVGSGRTAAVTVAAHCDLS*WASHSL
Trigger: CAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTG...AGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp ATGGGCTCAAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGACCACCTGTGGGGTCTaGCTTGATGGGCTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: MGSKEVEGLGPDELLLLLTTCGV*LDGLKG
Trigger: TCCTTTGAGCCCATCAAGGCAGACCCCACAGGTGGT...CAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTTGAGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp CCACTGTCCTTGCTATCAGTCCCAGGGCCGCCACTCACTGTGATCTCAGCTGCTCCAGCAGAACCTCAATaGGACCACTCACACTCTTCA +
Preference number: 4 (lower is better)
Translates to: PLSLLSVPGPPLTVISAAPAEPQ*DHSHSS
Trigger: TGAAGAGTGTGAGTGGTCCCATTGAGGTTCTGCTGG...AGCAGCTGAGATCACAGTGAGTGGCGGCCCTGGGACTGATAGCAAGGACAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp CCACTGTCCTTGCTATCAGTCCCAGGGCCGCCACTCACTGTGATCTCAGCTGCTACAGCAGATGGGCTCTaGAGCAAATCTTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PLSLLSVPGPPLTVISAATADGL*SKSSGG
Trigger: ACCACCTGAAGATTTGCTCCAGAGCCCATCTGCTGT...AGCAGCTGAGATCACAGTGAGTGGCGGCCCTGGGACTGATAGCAAGGACAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp GCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTACAGCAGATGGGCTCTaGAGCAAATCTTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: ATHCDLSCWASHSLDFCTTADGL*SKSSGG
Trigger: ACCACCTGAAGATTTGCTCCAGAGCCCATCTGCTGT...AGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp GCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTCCCTATGGTGACAGATaGCAGATTCCACTGGATGCT +
Preference number: 4 (lower is better)
Translates to: ATHCDLSCWASHSLDFCTPYGDR*QIPLDA
Trigger: AGCATCCAGTGGAATCTGCCATCTGTCACCATAGGG...AGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568839.5
CDS-3UTR TCA 90 bp ATGAGTGACGTAGGCCAAACAGCTGTTCTGCACGTCCTCTGTGACGTTCCGGATACTTCTTCTGCCCATTaGGACCCTCTGGGATGGGCA +
Preference number: 4 (lower is better)
Translates to: MSDVGQTAVLHVLCDVPDTSSAH*DPLGWA
Trigger: TGCCCATCCCAGAGGGTCTCAATGGGCAGAAGAAGT...ATCCGGAACGTCACAGAGGACGTGCAGAACAGCTGTTTGGCCTACGTCACTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR TCA 90 bp ACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTGCCGTTAAGGAGAATGGCTaGTGCCCTATGGTGACAGAT +
Preference number: 4 (lower is better)
Translates to: THCDLSCWASHSLDFCTAVKENG*CPMVTD
Trigger: ATCTGTCACCATAGGGCATCAGCCATTCTCCTTAAC...GGCAGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568839.5
CDS-3UTR CCA 90 bp CACACTCTTCAGGTGAATCTGGTACTTCTTCTGCCCATTGAGACCCTCTGGGATCCCATTGAGACCCTCTaGGATGGGCACCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: HTLQVNLVLLLPIETLWDPIETL*DGHLQA
Trigger: AGCCTGGAGGTGCCCATCCCAGAGGGTCTCAATGGG...ATCCCAGAGGGTCTCAATGGGCAGAAGAAGTACCAGATTCACCTGAAGAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR CCA 90 bp CCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGGCACGTGAGTCATGCACTCTCGTGTaGGATCAAAGATTTCTGACA +
Preference number: 4 (lower is better)
Translates to: PHHLQVLGLKAQQKWARESCTLV*DQRFLT
Trigger: TGTCAGAAATCTTTGATCCCACACGAGAGTGCATGA...CTCACGTGCCCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR TCA 90 bp GTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTGCTGCTGCTGCTGCTCACACTCTTCAGGTaGATCTGGTACTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VEGLGPDELLLLLLLLLLLTLFR*IWYFFC
Trigger: GCAGAAGAAGTACCAGATTCACCTGAAGAGTGTGAG...CAGCAGCAGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR TCA 90 bp AAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTGCTGCTGCTGATGCCCTATGGTaGCAGATGGCAGATTCCACT +
Preference number: 4 (lower is better)
Translates to: KGGRRVGSGRTAAVTVAAADALW*QMADST
Trigger: AGTGGAATCTGCCATCTGTCACCATAGGGCATCAGC...AGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568839.5
CDS-3UTR GCA 90 bp ATGAGTGACGTAGGCCAAACAGCTGTTCTGCACGTCCTCTGTGACGTTCCGGATGCCAAACAGCTGTTCTaGACGTCCTCTGTGACGTTC +
Preference number: 4 (lower is better)
Translates to: MSDVGQTAVLHVLCDVPDAKQLF*TSSVTF
Trigger: GAACGTCACAGAGGACGTGCAGAACAGCTGTTTGGC...ATCCGGAACGTCACAGAGGACGTGCAGAACAGCTGTTTGGCCTACGTCACTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR CCA 90 bp CCACTGTCCTTGCTATCAGTCCCAGGGCCGCCACTCACTGTGATCTCAGCTGCTTGTAGAAACAGCAGATaGGCTCTGGAGCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: PLSLLSVPGPPLTVISAACRNSR*ALEQIF
Trigger: GAAGATTTGCTCCAGAGCCCATCTGCTGTTTCTACA...AGCAGCTGAGATCACAGTGAGTGGCGGCCCTGGGACTGATAGCAAGGACAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CCA 90 bp GCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTGGGTATCTCTTCCACTaGATGCTGTTCTTGGACTTT +
Preference number: 4 (lower is better)
Translates to: ATHCDLSCWASHSLDFCTGYLFH*MLFLDF
Trigger: AAAGTCCAAGAACAGCATCCAGTGGAAGAGATACCC...AGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569573.1
CDS-3UTR CCA 90 bp ATGAGTGACGTAGGCCAAACAGCTGTTCTGCACGTCCTCTGTGACGTTCCGGATCCAGCAGAACCTCAATaGGACCACTCACACTCTTCA +
Preference number: 4 (lower is better)
Translates to: MSDVGQTAVLHVLCDVPDPAEPQ*DHSHSS
Trigger: TGAAGAGTGTGAGTGGTCCCATTGAGGTTCTGCTGG...ATCCGGAACGTCACAGAGGACGTGCAGAACAGCTGTTTGGCCTACGTCACTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR CCA 90 bp TGTTCACCAGCAGAACCTCAATGGGACCACTCACACTCTTCAGGTGAATCTGGTCAAATCTTCAGGTGGTaGCACAGGCACAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: CSPAEPQWDHSHSSGESGQIFRW*HRHSHR
Trigger: CCTGTGGCTGTGCCTGTGCCACCACCTGAAGATTTG...ACCAGATTCACCTGAAGAGTGTGAGTGGTCCCATTGAGGTTCTGCTGGTGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR CCA 90 bp ATGGGCTCAAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTGTAGAAACAGCAGATaGGCTCTGGAGCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: MGSKEVEGLGPDELLLLLCRNSR*ALEQIF
Trigger: GAAGATTTGCTCCAGAGCCCATCTGCTGTTTCTACA...CAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTTGAGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR GCA 90 bp TGTTCACCAGCAGAACCTCAATGGGACCACTCACACTCTTCAGGTGAATCTGGTATCTGGTACTTCTTCTaGCCATTGAGACCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSPAEPQWDHSHSSGESGIWYFF*PLRPSG
Trigger: CCCAGAGGGTCTCAATGGGCAGAAGAAGTACCAGAT...ACCAGATTCACCTGAAGAGTGTGAGTGGTCCCATTGAGGTTCTGCTGGTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR CCA 90 bp AAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTGCTGCTGATGGCAGATTCCACTaGATGCTGTTCTTGGACTTT +
Preference number: 4 (lower is better)
Translates to: KGGRRVGSGRTAAVTVAADGRFH*MLFLDF
Trigger: AAAGTCCAAGAACAGCATCCAGTGGAATCTGCCATC...AGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568839.5
CDS-3UTR TCA 90 bp CACACTCTTCAGGTGAATCTGGTACTTCTTCTGCCCATTGAGACCCTCTGGGATCTCACACTCTTCAGGTaGATCTGGTACTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: HTLQVNLVLLLPIETLWDLTLFR*IWYFFC
Trigger: GCAGAAGAAGTACCAGATTCACCTGAAGAGTGTGAG...ATCCCAGAGGGTCTCAATGGGCAGAAGAAGTACCAGATTCACCTGAAGAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR CAA 90 bp TGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCTCCTCTTTTCGTGCCGGCTaGGAGTGCCCGGGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: WGSRRWGQSSGLDHPDSSSFRAG*ECPGAA
Trigger: CGCCGCCCCCGGGCACTCCAAGCCGGCACGAAAAGA...GGAGGAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS GCA 90 bp AGCTCTTCTCCTCGCCAGCCAGGAAGGGCCACGAGGACGAACACCTaGAGCCCGAGCCTGGCCCATAGCTGTAGCTCGATGGCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: SSSPRQPGRATRTNT*SPSLAHSCSSMASA
Trigger: GGCCGAGGCCATCGAGCTACAGCTATGGGCCAGGCTCGGGCTGCAGGTGTTCGTCCTCGTGGCCCTTCCTGGCTGGCGAGGAGAAGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564718.1
ENST00000567007.5
CDS-3UTR CAA 90 bp TGCAGTGGCCGGGTGTCCAGTGTTGTTGGGCCCAGTGGGAGTGAACTGAGCTCATCTTTTCGTGCCGGCTaGGAGTGCCCGGGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: CSGRVSSVVGPSGSELSSSFRAG*ECPGAA
Trigger: CGCCGCCCCCGGGCACTCCAAGCCGGCACGAAAAGA...TGAGCTCAGTTCACTCCCACTGGGCCCAACAACACTGGACACCCGGCCACTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS CCA 90 bp GGCCCCTGCCTTCTTCGGCACCCTCCACCCCACGCCCGACACTTCTaGGTGGGAGACTCTACTACCCTCCCACTATGCCCACTCACTTCC +
Preference number: 5 (lower is better)
Translates to: GPCLLRHPPPHARHF*VGDSTTLPLCPLTS
Trigger: GGAAGTGAGTGGGCATAGTGGGAGGGTAGTAGAGTCTCCCACCCAGAAGTGTCGGGCGTGGGGTGGAGGGTGCCGAAGAAGGCAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000561904.5
ENST00000566368.1
ENST00000567007.5
ENST00000568485.1
CDS-3UTR CAA 90 bp TATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCTGCAATCTCCCGGGTATaGCAGCCAGGCCCCACACCC +
Preference number: 5 (lower is better)
Translates to: YGAAGGGANHQGWTTQTPAISRV*QPGPTP
Trigger: GGGTGTGGGGCCTGGCTGCAATACCCGGGAGATTGC...AGGAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CAA 90 bp TATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTCCTGCCGGGTGTCCAGTGTaGTTGGGCCCAGTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: YGAAGGGANHQGWTTQTPAGCPV*LGPVGV
Trigger: CACTCCCACTGGGCCCAACAACACTGGACACCCGGC...AGGAGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CAA 90 bp CCCCACCACCTGCAGGTTCTAGGGCTAAAGGCCCAGCAGAAGTGGGCACGTGAGGACCTCTGTTCCTTCTaGGTAGCCGCCCCCACCACC +
Preference number: 5 (lower is better)
Translates to: PHHLQVLGLKAQQKWAREDLCSF*VAAPTT
Trigger: GGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTC...CTCACGTGCCCACTTCTGCTGGGCCTTTAGCCCTAGAACCTGCAGGTGGTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CAA 90 bp ATGGGCTCAAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTCTTTTCGTGCCGGCTaGGAGTGCCCGGGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: MGSKEVEGLGPDELLLLLSFRAG*ECPGAA
Trigger: CGCCGCCCCCGGGCACTCCAAGCCGGCACGAAAAGA...CAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTTGAGCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CAA 90 bp GGTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTAGCTCACCACTGTCCTaGCTATCAGTCCCAGGGCCG +
Preference number: 5 (lower is better)
Translates to: GYGAAGGGANHQGWTTQTSSPLS*LSVPGP
Trigger: CGGCCCTGGGACTGATAGCAAGGACAGTGGTGAGCT...AGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CAA 90 bp CCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTGGCCGGGTGTCCAGTGTaGTTGGGCCCAGTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: PLTVISAAGPAIPWTSALAGCPV*LGPVGV
Trigger: CACTCCCACTGGGCCCAACAACACTGGACACCCGGC...CAGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CAA 90 bp ACTGTCCTTGCTATCAGTCCCAGGGCCGCCACTCACTGTGATCTCAGCTGCTGGGCCGGGTGTCCAGTGTaGTTGGGCCCAGTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: TVLAISPRAATHCDLSCWAGCPV*LGPVGV
Trigger: CACTCCCACTGGGCCCAACAACACTGGACACCCGGC...CCAGCAGCTGAGATCACAGTGAGTGGCGGCCCTGGGACTGATAGCAAGGACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CAA 90 bp ATGAGTGACGTAGGCCAAACAGCTGTTCTGCACGTCCTCTGTGACGTTCCGGATTCTTTTCGTGCCGGCTaGGAGTGCCCGGGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: MSDVGQTAVLHVLCDVPDSFRAG*ECPGAA
Trigger: CGCCGCCCCCGGGCACTCCAAGCCGGCACGAAAAGA...ATCCGGAACGTCACAGAGGACGTGCAGAACAGCTGTTTGGCCTACGTCACTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR CAA 90 bp CTCCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCAGAAGGGACACGAACTaGGTGGTGAGCAGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: LPRDLCSFLVAAPTTCRFRRDTN*VVSSPR
Trigger: CCTGGGACTGCTCACCACCAAGTTCGTGTCCCTTCT...GAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CAA 90 bp CCGCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCAAGCTCACCACTGTCCTaGCTATCAGTCCCAGGGCCG +
Preference number: 5 (lower is better)
Translates to: PPLTVISAAGPAIPWTSASSPLS*LSVPGP
Trigger: CGGCCCTGGGACTGATAGCAAGGACAGTGGTGAGCT...TGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CAA 90 bp GGTTATGGGGCAGCAGGAGGTGGGGCCAATCATCAGGGCTGGACCACCCAGACTTGCTGCACCCACACCTaGTGCTGGTCTAGTTCTTGC +
Preference number: 5 (lower is better)
Translates to: GYGAAGGGANHQGWTTQTCCTHT*CWSSSC
Trigger: GCAAGAACTAGACCAGCACAAGGTGTGGGTGCAGCA...AGTCTGGGTGGTCCAGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CAA 90 bp CTCCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCTACTTCTTCTGCCCATaGAGACCCTCTGGGATGGGC +
Preference number: 5 (lower is better)
Translates to: LPRDLCSFLVAAPTTCRFYFFCP*RPSGMG
Trigger: GCCCATCCCAGAGGGTCTCAATGGGCAGAAGAAGTA...GAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CAA 90 bp CCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCTAAAGGAGGTAGAAGGGTaGGGTCCGGACGAACTGCTG +
Preference number: 5 (lower is better)
Translates to: PQRPLFLLGSRPHHLQVLKEVEG*GPDELL
Trigger: CAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTT...TAGAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CAA 90 bp CCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCTACCTGTGGGGTCTGCCTaGATGGGCTCAAAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: PQRPLFLLGSRPHHLQVLPVGSA*MGSKEV
Trigger: TACCTCCTTTGAGCCCATCAAGGCAGACCCCACAGG...TAGAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CAA 90 bp ACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTGCCAGGGCCTGTGGGGTCTGCCTaGATGGGCTCAAAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: TVISAAGPAIPWTSALPGPVGSA*MGSKEV
Trigger: TACCTCCTTTGAGCCCATCAAGGCAGACCCCACAGG...CCCTGGCAGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS TCA 90 bp CGAGCCTGGCCCATAGCTGTAGCTCGATGGCCTCGGCCGAATGAATaGAACATCCCCCGGCTTCTCTCCTGTGAGAAAGCACACGATGGC +
Preference number: 5 (lower is better)
Translates to: RAWPIAVARWPRPNE*NIPRLLSCEKAHDG
Trigger: GCCATCGTGTGCTTTCTCACAGGAGAGAAGCCGGGGGATGTTTCATTCATTCGGCCGAGGCCATCGAGCTACAGCTATGGGCCAGGCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567007.5
CDS GCA 90 bp GGGAGTAATCTGGATTCCAACCCTGTAGTGCCTCCCAGGCGCTACTaGAGCTCAGGACCGCAGCTCTGTCCCATAGGCAGCTCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: GSNLDSNPVVPPRRY*SSGPQLCPIGSSSP
Trigger: AGGAGAAGAGCTGCCTATGGGACAGAGCTGCGGTCCTGAGCTGCAGTAGCGCCTGGGAGGCACTACAGGGTTGGAATCCAGATTACTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567007.5
CDS-3UTR CAA 90 bp ATGAGTGACGTAGGCCAAACAGCTGTTCTGCACGTCCTCTGTGACGTTCCGGATGCAATCTCCCGGGTATaGCAGCCAGGCCCCACACCC +
Preference number: 5 (lower is better)
Translates to: MSDVGQTAVLHVLCDVPDAISRV*QPGPTP
Trigger: GGGTGTGGGGCCTGGCTGCAATACCCGGGAGATTGC...ATCCGGAACGTCACAGAGGACGTGCAGAACAGCTGTTTGGCCTACGTCACTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR CAA 90 bp GCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTAAGGAGGTAGAAGGGTaGGGTCCGGACGAACTGCTG +
Preference number: 5 (lower is better)
Translates to: ATHCDLSCWASHSLDFCTKEVEG*GPDELL
Trigger: CAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTT...AGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS TCA 90 bp TGGTGCCTGATGGGGCCCGGATGGCCAAGAGGGTATCTCCTAGAATaGCATGGAGAATGGGTCAGAGCCCATGGGCTCAATCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: WCLMGPGWPRGYLLE*HGEWVRAHGLNLSW
Trigger: CCAGCTCAGATTGAGCCCATGGGCTCTGACCCATTCTCCATGTCATTCTAGGAGATACCCTCTTGGCCATCCGGGCCCCATCAGGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568693.1
CDS GCA 90 bp GAATGGGTCAGAGCCCATGGGCTCAATCTGAGCTGGGAACAGAGGTaGCTGCCTTTTGGAGCAAGGCAGGAGATCACGGTCCCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: EWVRAHGLNLSWEQR*LPFGARQEITVPEE
Trigger: TTCCTCAGGGACCGTGATCTCCTGCCTTGCTCCAAAAGGCAGGCACCTCTGTTCCCAGCTCAGATTGAGCCCATGGGCTCTGACCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568693.1
CDS-3UTR CAA 90 bp GCCACTCACTGTGATCTCAGCTGCTGGGCCAGCCATTCCCTGGACTTCTGCACTTACTTCTTCTGCCCATaGAGACCCTCTGGGATGGGC +
Preference number: 5 (lower is better)
Translates to: ATHCDLSCWASHSLDFCTYFFCP*RPSGMG
Trigger: GCCCATCCCAGAGGGTCTCAATGGGCAGAAGAAGTA...AGTGCAGAAGTCCAGGGAATGGCTGGCCCAGCAGCTGAGATCACAGTGAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CAA 90 bp CTTGATGGGCTCAAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTAGCTCACCACTGTCCTaGCTATCAGTCCCAGGGCCG +
Preference number: 5 (lower is better)
Translates to: LDGLKGGRRVGSGRTAAVSSPLS*LSVPGP
Trigger: CGGCCCTGGGACTGATAGCAAGGACAGTGGTGAGCT...AACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTTGAGCCCATCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS TCA 90 bp CTGGCCACAGGCACCTCATTCCTCTACCGATGGCTGATCCCTAGGTaGGGGTGTTCTAGCCAAGGCCAACATCCCTTTCCCATGACCAGT +
Preference number: 5 (lower is better)
Translates to: LATGTSFLYRWLIPR*GCSSQGQHPFPMTS
Trigger: ACTGGTCATGGGAAAGGGATGTTGGCCTTGGCTAGAACACCCTCACCTAGGGATCAGCCATCGGTAGAGGAATGAGGTGCCTGTGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568693.1
CDS CCA 90 bp CCTGATGGGGCCCGGATGGCCAAGAGGGTATCTCCTAGAATGACATaGAGAATGGGTCAGAGCCCATGGGCTCAATCTGAGCTGGGAACA +
Preference number: 5 (lower is better)
Translates to: PDGARMAKRVSPRMT*RMGQSPWAQSELGT
Trigger: TGTTCCCAGCTCAGATTGAGCCCATGGGCTCTGACCCATTCTCCATGTCATTCTAGGAGATACCCTCTTGGCCATCCGGGCCCCATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568693.1
CDS-3UTR CAA 90 bp GTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTGCTGCTGCTGCTGTACTTCTTCTGCCCATaGAGACCCTCTGGGATGGGC +
Preference number: 5 (lower is better)
Translates to: VEGLGPDELLLLLLLLLLYFFCP*RPSGMG
Trigger: GCCCATCCCAGAGGGTCTCAATGGGCAGAAGAAGTA...CAGCAGCAGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CAA 90 bp CTTGATGGGCTCAAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTAAGGAGGTAGAAGGGTaGGGTCCGGACGAACTGCTG +
Preference number: 5 (lower is better)
Translates to: LDGLKGGRRVGSGRTAAVKEVEG*GPDELL
Trigger: CAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTT...AACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTTGAGCCCATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS-3UTR CAA 90 bp CCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCTATTGAGCTCAATCAGTTaGTCAGCAATCTCCCGGGTA +
Preference number: 5 (lower is better)
Translates to: PQRPLFLLGSRPHHLQVLLSSIS*SAISRV
Trigger: TACCCGGGAGATTGCTGACAAACTGATTGAGCTCAA...TAGAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS-3UTR CAA 90 bp AAAGGAGGTAGAAGGGTTGGGTCCGGACGAACTGCTGCTGTTACTGTTGCTGCTCCTGTGGGGTCTGCCTaGATGGGCTCAAAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: KGGRRVGSGRTAAVTVAAPVGSA*MGSKEV
Trigger: TACCTCCTTTGAGCCCATCAAGGCAGACCCCACAGG...AGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTACCTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568839.5
ENST00000569573.1
CDS TCA 90 bp ATGATAGCCCCCAAACCCAGTCATACAAGGTCAGGAAGAGGTCGTTaGAACTGGCTGTGCTGGAACCCAGACACAGGAGGACCACAAGCC +
Preference number: 5 (lower is better)
Translates to: MIAPKPSHTRSGRGR*NWLCWNPDTGGPQA
Trigger: GGCTTGTGGTCCTCCTGTGTCTGGGTTCCAGCACAGCCAGTTTCAACGACCTCTTCCTGACCTTGTATGACTGGGTTTGGGGGCTATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567228.1
CDS TCA 90 bp GTGAAAGATCACTGGCCACAGGCACCTCATTCCTCTACCGATGGCTaGTCCCTAGGTGAGGGTGTTCTAGCCAAGGCCAACATCCCTTTC +
Preference number: 5 (lower is better)
Translates to: VKDHWPQAPHSSTDG*SLGEGVLAKANIPF
Trigger: GAAAGGGATGTTGGCCTTGGCTAGAACACCCTCACCTAGGGATCAGCCATCGGTAGAGGAATGAGGTGCCTGTGGCCAGTGATCTTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568693.1
CDS-3UTR CAA 90 bp CCCCAGAGACCTCTGTTCCTTCTTGGTAGCCGCCCCCACCACCTGCAGGTTCTAATTTCTGACAGCTCTTaGGGGAGTTCCAAAACACCT +
Preference number: 5 (lower is better)
Translates to: PQRPLFLLGSRPHHLQVLISDSS*GSSKTP
Trigger: AGGTGTTTTGGAACTCCCCAAAGAGCTGTCAGAAAT...TAGAACCTGCAGGTGGTGGGGGCGGCTACCAAGAAGGAACAGAGGTCTCTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379378.8
CDS CCA 90 bp AAGAGGGTATCTCCTAGAATGACATGGAGAATGGGTCAGAGCCCATaGGCTCAATCTGAGCTGGGAACAGAGGTGCCTGCCTTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: KRVSPRMTWRMGQSP*AQSELGTEVPAFWS
Trigger: GCTCCAAAAGGCAGGCACCTCTGTTCCCAGCTCAGATTGAGCCCATGGGCTCTGACCCATTCTCCATGTCATTCTAGGAGATACCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568693.1
CDS TCA 90 bp ACAGATGGCAGACTACAGAAAAGACCCAATTCTTTAGCTAAGGTCTaGCACACAGGCCCTCAGAGACCGTTCTGGGGACTCAGGTCCACC +
Preference number: 5 (lower is better)
Translates to: TDGRLQKRPNSLAKV*HTGPQRPFWGLRST
Trigger: GGTGGACCTGAGTCCCCAGAACGGTCTCTGAGGGCCTGTGTGTCAGACCTTAGCTAAAGAATTGGGTCTTTTCTGTAGTCTGCCATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563238.5
CDS-3UTR CAA 90 bp TGTTCACCAGCAGAACCTCAATGGGACCACTCACACTCTTCAGGTGAATCTGGTTGCTGCACCCACACCTaGTGCTGGTCTAGTTCTTGC +
Preference number: 5 (lower is better)
Translates to: CSPAEPQWDHSHSSGESGCCTHT*CWSSSC
Trigger: GCAAGAACTAGACCAGCACAAGGTGTGGGTGCAGCA...ACCAGATTCACCTGAAGAGTGTGAGTGGTCCCATTGAGGTTCTGCTGGTGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR CAA 90 bp TGTTCACCAGCAGAACCTCAATGGGACCACTCACACTCTTCAGGTGAATCTGGTTACTTCTTCTGCCCATaGAGACCCTCTGGGATGGGC +
Preference number: 5 (lower is better)
Translates to: CSPAEPQWDHSHSSGESGYFFCP*RPSGMG
Trigger: GCCCATCCCAGAGGGTCTCAATGGGCAGAAGAAGTA...ACCAGATTCACCTGAAGAGTGTGAGTGGTCCCATTGAGGTTCTGCTGGTGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS-3UTR CAA 90 bp CACACTCTTCAGGTGAATCTGGTACTTCTTCTGCCCATTGAGACCCTCTGGGATTTGAGCTCAATCAGTTaGTCAGCAATCTCCCGGGTA +
Preference number: 5 (lower is better)
Translates to: HTLQVNLVLLLPIETLWDLSSIS*SAISRV
Trigger: TACCCGGGAGATTGCTGACAAACTGATTGAGCTCAA...ATCCCAGAGGGTCTCAATGGGCAGAAGAAGTACCAGATTCACCTGAAGAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565849.5
CDS GCA 72 bp CCTCGCCAGCCAGGAAGGGCCACGAGGACGAACACCTaGAGCCCGAGCCTGGCCCATAGCTGTAGCTCGATG +
Preference number: 6 (lower is better)
Translates to: PRQPGRATRTNT*SPSLAHSCSSM
Trigger: CATCGAGCTACAGCTATGGGCCAGGCTCGGGCTGCAGGTGTTCGTCCTCGTGGCCCTTCCTGGCTGGCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564718.1
ENST00000566368.1
ENST00000567007.5
CDS GCA 72 bp GGTGTCAGCTGCCCTGTAGTGCCTCCCAGGCGCTACTaGAGCTCAGGACCGCAGCTCTGTCCCATAGGCAGC +
Preference number: 6 (lower is better)
Translates to: GVSCPVVPPRRY*SSGPQLCPIGS
Trigger: GCTGCCTATGGGACAGAGCTGCGGTCCTGAGCTGCAGTAGCGCCTGGGAGGCACTACAGGGCAGCTGACACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564718.1
ENST00000566368.1
CDS CCA 72 bp GAAGGGCCACGAGGACGAACACCTGCAGCCCGAGCCTaGCCCATAGCTGTAGCTCGATGGCCTCGGCCGAAT +
Preference number: 6 (lower is better)
Translates to: EGPRGRTPAARA*PIAVARWPRPN
Trigger: ATTCGGCCGAGGCCATCGAGCTACAGCTATGGGCCAGGCTCGGGCTGCAGGTGTTCGTCCTCGTGGCCCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564718.1
ENST00000567007.5
CDS GCA 72 bp CTGGATTCCAACCCTGTAGTGCCTCCCAGGCGCTACTaGAGCTCAGGACCGCAGCTCTGTCCCATAGGCAGC +
Preference number: 6 (lower is better)
Translates to: LDSNPVVPPRRY*SSGPQLCPIGS
Trigger: GCTGCCTATGGGACAGAGCTGCGGTCCTGAGCTGCAGTAGCGCCTGGGAGGCACTACAGGGTTGGAATCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567007.5
CDS CCA 72 bp CCTGGCAGAGAGAATGGAGAATGCTCAGCCCCACTCTaGGGTGTACCCCCAGCCACCCTGAGACGTGGTCTG +
Preference number: 6 (lower is better)
Translates to: PGRENGECSAPL*GVPPATLRRGL
Trigger: CAGACCACGTCTCAGGGTGGCTGGGGGTACACCCCAGAGTGGGGCTGAGCATTCTCCATTCTCTCTGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567007.5
CDS TCA 72 bp CACTGGCCACAGGCACCTCATTCCTCTACCGATGGCTaGTCCCTAGGTGAGGGTGTTCTAGCCAAGGCCAAC +
Preference number: 6 (lower is better)
Translates to: HWPQAPHSSTDG*SLGEGVLAKAN
Trigger: GTTGGCCTTGGCTAGAACACCCTCACCTAGGGATCAGCCATCGGTAGAGGAATGAGGTGCCTGTGGCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568693.1
CDS CCA 72 bp GGAGAATGGGTCAGAGCCCATGGGCTCAATCTGAGCTaGGAACAGAGGTGCCTGCCTTTTGGAGCAAGGCAG +
Preference number: 6 (lower is better)
Translates to: GEWVRAHGLNLS*EQRCLPFGARQ
Trigger: CTGCCTTGCTCCAAAAGGCAGGCACCTCTGTTCCCAGCTCAGATTGAGCCCATGGGCTCTGACCCATTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568693.1
CDS TCA 72 bp CCCATAGCTGTAGCTCGATGGCCTCGGCCGAATGAATaGAACATCCCCCGGCTTCTCTCCTGTGAGAAAGCA +
Preference number: 6 (lower is better)
Translates to: PIAVARWPRPNE*NIPRLLSCEKA
Trigger: TGCTTTCTCACAGGAGAGAAGCCGGGGGATGTTTCATTCATTCGGCCGAGGCCATCGAGCTACAGCTATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567007.5
CDS TCA 72 bp ATGGGGCCCGGATGGCCAAGAGGGTATCTCCTAGAATaGCATGGAGAATGGGTCAGAGCCCATGGGCTCAAT +
Preference number: 6 (lower is better)
Translates to: MGPGWPRGYLLE*HGEWVRAHGLN
Trigger: ATTGAGCCCATGGGCTCTGACCCATTCTCCATGTCATTCTAGGAGATACCCTCTTGGCCATCCGGGCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568693.1
CDS CCA 72 bp TCTCCTAGAATGACATGGAGAATGGGTCAGAGCCCATaGGCTCAATCTGAGCTGGGAACAGAGGTGCCTGCC +
Preference number: 6 (lower is better)
Translates to: SPRMTWRMGQSP*AQSELGTEVPA
Trigger: GGCAGGCACCTCTGTTCCCAGCTCAGATTGAGCCCATGGGCTCTGACCCATTCTCCATGTCATTCTAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568693.1
CDS TCA 72 bp CCCAAACCCAGTCATACAAGGTCAGGAAGAGGTCGTTaGAACTGGCTGTGCTGGAACCCAGACACAGGAGGA +
Preference number: 6 (lower is better)
Translates to: PKPSHTRSGRGR*NWLCWNPDTGG
Trigger: TCCTCCTGTGTCTGGGTTCCAGCACAGCCAGTTTCAACGACCTCTTCCTGACCTTGTATGACTGGGTTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567228.1
CDS CCA 72 bp CATCCCTTTCCCATGACCAGTCAGGAGCATACAAGATaGAGAAGAAACACATCAGCGGGGCACAGTGGCTCA +
Preference number: 6 (lower is better)
Translates to: HPFPMTSQEHTR*RRNTSAGHSGS
Trigger: TGAGCCACTGTGCCCCGCTGATGTGTTTCTTCTCCATCTTGTATGCTCCTGACTGGTCATGGGAAAGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568693.1
CDS TCA 72 bp AGACTACAGAAAAGACCCAATTCTTTAGCTAAGGTCTaGCACACAGGCCCTCAGAGACCGTTCTGGGGACTC +
Preference number: 6 (lower is better)
Translates to: RLQKRPNSLAKV*HTGPQRPFWGL
Trigger: GAGTCCCCAGAACGGTCTCTGAGGGCCTGTGTGTCAGACCTTAGCTAAAGAATTGGGTCTTTTCTGTAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563238.5