Pregenerated sensors for E2F3-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000224707Ensembl transcript IDs: ENST00000433182.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGCTGGAGAGCACAGACTTTATGGGAAGGTGGTAGCCACGAAGGCTaGTCTCCATCAGTTCTGCCAGACCCTGGGCAGGGCATTTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: RWRAQTLWEGGSHEG*SPSVLPDPGQGISL Trigger: AAGAGAAATGCCCTGCCCAGGGTCTGGCAGAACTGATGGAGAGCAGCCTTCGTGGCTACCACCTTCCCATAAAGTCTGTGCTCTCCAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433182.1 |
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| CDS CCA 90 bp | GTAATGTTTGATAAGGGGGTTTCACTGCAAGAGATGAGGAAGTCCTaGCAGGGCACCCTGGCTGGGTTGTGGCGCCATTGCTTTCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: VMFDKGVSLQEMRKS*QGTLAGLWRHCFLH Trigger: ATGGAGAAAGCAATGGCGCCACAACCCAGCCAGGGTGCCCTGCCAGGACTTCCTCATCTCTTGCAGTGAAACCCCCTTATCAAACATTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433182.1 |
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| CDS CCA 90 bp | GGTTTCACTGCAAGAGATGAGGAAGTCCTGGCAGGGCACCCTGGCTaGGTTGTGGCGCCATTGCTTTCTCCATCGAAGTCTATAATCAAA | + |
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Preference number: 5 (lower is better) Translates to: GFTARDEEVLAGHPG*VVAPLLSPSKSIIK Trigger: TTTGATTATAGACTTCGATGGAGAAAGCAATGGCGCCACAACCCAGCCAGGGTGCCCTGCCAGGACTTCCTCATCTCTTGCAGTGAAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433182.1 |
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| CDS CCA 90 bp | AAACCAACTTTTCCACAACATGGCAAATCCTTGATATGTAGTAAGTaGAGTGCAAGAAAGTATGACAAAGGGGGCCAGATAGCACGTAAT | + |
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Preference number: 5 (lower is better) Translates to: KPTFPQHGKSLICSK*SARKYDKGGQIARN Trigger: ATTACGTGCTATCTGGCCCCCTTTGTCATACTTTCTTGCACTCCACTTACTACATATCAAGGATTTGCCATGTTGTGGAAAAGTTGGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433182.1 |
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| CDS GCA 72 bp | GCACAGACTTTATGGGAAGGTGGTAGCCACGAAGGCTaGTCTCCATCAGTTCTGCCAGACCCTGGGCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: AQTLWEGGSHEG*SPSVLPDPGQG Trigger: GCCCTGCCCAGGGTCTGGCAGAACTGATGGAGAGCAGCCTTCGTGGCTACCACCTTCCCATAAAGTCTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433182.1 |
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| CDS CCA 72 bp | GATAAGGGGGTTTCACTGCAAGAGATGAGGAAGTCCTaGCAGGGCACCCTGGCTGGGTTGTGGCGCCATTGC | + |
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Preference number: 6 (lower is better) Translates to: DKGVSLQEMRKS*QGTLAGLWRHC Trigger: GCAATGGCGCCACAACCCAGCCAGGGTGCCCTGCCAGGACTTCCTCATCTCTTGCAGTGAAACCCCCTTATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433182.1 |
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| CDS CCA 72 bp | GCAAGAGATGAGGAAGTCCTGGCAGGGCACCCTGGCTaGGTTGTGGCGCCATTGCTTTCTCCATCGAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: ARDEEVLAGHPG*VVAPLLSPSKS Trigger: AGACTTCGATGGAGAAAGCAATGGCGCCACAACCCAGCCAGGGTGCCCTGCCAGGACTTCCTCATCTCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433182.1 |
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| CDS GCA 72 bp | AAGGTGGTAGCCACGAAGGCTGCTCTCCATCAGTTCTaGCAGACCCTGGGCAGGGCATTTCTCTTGGACTCT | + |
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Preference number: 6 (lower is better) Translates to: KVVATKAALHQF*QTLGRAFLLDS Trigger: AGAGTCCAAGAGAAATGCCCTGCCCAGGGTCTGGCAGAACTGATGGAGAGCAGCCTTCGTGGCTACCACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433182.1 |
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| CDS CCA 72 bp | CTTATTACCAAGCGCCGCTGGAGAGCACAGACTTTATaGGAAGGTGGTAGCCACGAAGGCTGCTCTCCATCA | + |
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Preference number: 6 (lower is better) Translates to: LITKRRWRAQTL*EGGSHEGCSPS Trigger: TGATGGAGAGCAGCCTTCGTGGCTACCACCTTCCCATAAAGTCTGTGCTCTCCAGCGGCGCTTGGTAATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433182.1 |
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| CDS CCA 72 bp | TTTCCACAACATGGCAAATCCTTGATATGTAGTAAGTaGAGTGCAAGAAAGTATGACAAAGGGGGCCAGATA | + |
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Preference number: 6 (lower is better) Translates to: FPQHGKSLICSK*SARKYDKGGQI Trigger: TATCTGGCCCCCTTTGTCATACTTTCTTGCACTCCACTTACTACATATCAAGGATTTGCCATGTTGTGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433182.1 |
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| CDS CAA 72 bp | GTTATGAAACCAACTTTTCCACAACATGGCAAATCCTaGATATGTAGTAAGTGGAGTGCAAGAAAGTATGAC | + |
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Preference number: 6 (lower is better) Translates to: VMKPTFPQHGKS*ICSKWSARKYD Trigger: GTCATACTTTCTTGCACTCCACTTACTACATATCAAGGATTTGCCATGTTGTGGAAAAGTTGGTTTCATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433182.1 |
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