RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for E2F2 (Homo sapiens)

Ensembl gene IDs: ENSG00000007968

Ensembl transcript IDs: ENST00000361729.3, ENST00000487237.1, ENST00000634683.2, ENST00000635265.1

Found 486 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCTCACCCGTACCATTCATATCTCCCCACACAGCTTCTGCCGGCTaGGGCAGGAAAGGCGAGGAGACCCCATGCCCTGAGGGCAGCACC +
Preference number: 1 (lower is better)
Translates to: SSPVPFISPHTASAG*GRKGEETPCPEGST
Trigger: GGTGCTGCCCTCAGGGCATGGGGTCTCCTCGCCTTTCCTGCCCCAGCCGGCAGAAGCTGTGTGGGGAGATATGAATGGTACGGGTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 90 bp TGTTTCCACAGGAGCCTCAGTGCTACCTGCCCTAGGATGGCTCCCTaGGACCATCTCTGGGACAGAGGCGACCAGGAAGCCAAGACCGGC +
Preference number: 1 (lower is better)
Translates to: CFHRSLSATCPRMAP*DHLWDRGDQEAKTG
Trigger: GCCGGTCTTGGCTTCCTGGTCGCCTCTGTCCCAGAGATGGTCCCAGGGAGCCATCCTAGGGCAGGTAGCACTGAGGCTCCTGTGGAAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 90 bp TCTCTGGGACAGAGGCGACCAGGAAGCCAAGACCGGCAGCTCAGCTaGAGATGTGAGGCCAAGAACAGGGGAAGAGGCAAAAGGGCCCAC +
Preference number: 1 (lower is better)
Translates to: SLGQRRPGSQDRQLS*RCEAKNRGRGKRAH
Trigger: GTGGGCCCTTTTGCCTCTTCCCCTGTTCTTGGCCTCACATCTCCAGCTGAGCTGCCGGTCTTGGCTTCCTGGTCGCCTCTGTCCCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR TCA 90 bp CAGGGCCTTTCCCTGGACTTGGCCACCTCACCTGCAGCCTTCTTGTaGGAGGTCAGAAGTCAGAAGACTGGATGGGCCTCCCTAGGCCCA +
Preference number: 1 (lower is better)
Translates to: QGLSLDLATSPAAFL*EVRSQKTGWASLGP
Trigger: TGGGCCTAGGGAGGCCCATCCAGTCTTCTGACTTCTGACCTCTCACAAGAAGGCTGCAGGTGAGGTGGCCAAGTCCAGGGAAAGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR GCA 90 bp AGCACGGGGACCATGTTCTCTCGGTTCCAGCTCACCCTCGAAAAGTaGCACAGGCAAGGTTCTTCAGCTCACCCAGGAGCCAGCAGGCTG +
Preference number: 1 (lower is better)
Translates to: STGTMFSRFQLTLEK*HRQGSSAHPGASRL
Trigger: CAGCCTGCTGGCTCCTGGGTGAGCTGAAGAACCTTGCCTGTGGCACTTTTCGAGGGTGAGCTGGAACCGAGAGAACATGGTCCCCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR TCA 90 bp CATCTCAAGGGGAGAGGTAAGGACTTCCTCAGGAAAGGGGTCTCCTaGGCAGGTGGCTCCTGTTTCCACAGGAGCCTCAGTGCTACCTGC +
Preference number: 1 (lower is better)
Translates to: HLKGRGKDFLRKGVS*AGGSCFHRSLSATC
Trigger: GCAGGTAGCACTGAGGCTCCTGTGGAAACAGGAGCCACCTGCTCAGGAGACCCCTTTCCTGAGGAAGTCCTTACCTCTCCCCTTGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR GCA 90 bp GACCCTTCTTTACAGTGGGGCTGCCTCTGCCTACCAAGTCCTTGGTaGAAAATGGCTCCTGGACCAGCGCAAGGCAGAAACTCTGAGGAA +
Preference number: 1 (lower is better)
Translates to: DPSLQWGCLCLPSPW*KMAPGPAQGRNSEE
Trigger: TTCCTCAGAGTTTCTGCCTTGCGCTGGTCCAGGAGCCATTTTGCACCAAGGACTTGGTAGGCAGAGGCAGCCCCACTGTAAAGAAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 90 bp GAGGGTCCTAATTACCCCTCAAAAGGAGGTAGCAGGGCCTTTCCCTaGACTTGGCCACCTCACCTGCAGCCTTCTTGTGAGAGGTCAGAA +
Preference number: 1 (lower is better)
Translates to: EGPNYPSKGGSRAFP*TWPPHLQPSCERSE
Trigger: TTCTGACCTCTCACAAGAAGGCTGCAGGTGAGGTGGCCAAGTCCAGGGAAAGGCCCTGCTACCTCCTTTTGAGGGGTAATTAGGACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 90 bp TCTGACCCTTCTTTACAGTGGGGCTGCCTCTGCCTACCAAGTCCTTaGTGCAAAATGGCTCCTGGACCAGCGCAAGGCAGAAACTCTGAG +
Preference number: 1 (lower is better)
Translates to: SDPSLQWGCLCLPSP*CKMAPGPAQGRNSE
Trigger: CTCAGAGTTTCTGCCTTGCGCTGGTCCAGGAGCCATTTTGCACCAAGGACTTGGTAGGCAGAGGCAGCCCCACTGTAAAGAAGGGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 90 bp CCTAATTACCCCTCAAAAGGAGGTAGCAGGGCCTTTCCCTGGACTTaGCCACCTCACCTGCAGCCTTCTTGTGAGAGGTCAGAAGTCAGA +
Preference number: 1 (lower is better)
Translates to: PNYPSKGGSRAFPWT*PPHLQPSCERSEVR
Trigger: TCTGACTTCTGACCTCTCACAAGAAGGCTGCAGGTGAGGTGGCCAAGTCCAGGGAAAGGCCCTGCTACCTCCTTTTGAGGGGTAATTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR TCA 90 bp AGGGAGAACAAAGTCAGAACCATCCTAAAGCCAGTTTTTCAAGCTTaGCCACCTCCCTCTTCCTCCCTGAAGGCACACCAGCCGATCCCA +
Preference number: 1 (lower is better)
Translates to: RENKVRTILKPVFQA*PPPSSSLKAHQPIP
Trigger: TGGGATCGGCTGGTGTGCCTTCAGGGAGGAAGAGGGAGGTGGTCAAGCTTGAAAAACTGGCTTTAGGATGGTTCTGACTTTGTTCTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 90 bp CCTCCCTCTTCCTCCCTGAAGGCACACCAGCCGATCCCATTACTGTaGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGA +
Preference number: 1 (lower is better)
Translates to: PPSSSLKAHQPIPLL*KRDTLWSILTPLMG
Trigger: TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAGGAAGAGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 90 bp GTGGCCACCATGGTCACTGAGGATCCTCGTGGGAGAATAGGGTTCTaGGACCTCAGGATACAATCACAAGAACCAGAAAGCTGCTTCCAA +
Preference number: 1 (lower is better)
Translates to: VATMVTEDPRGRIGF*DLRIQSQEPESCFQ
Trigger: TTGGAAGCAGCTTTCTGGTTCTTGTGATTGTATCCTGAGGTCCCAGAACCCTATTCTCCCACGAGGATCCTCAGTGACCATGGTGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR TCA 90 bp GAAGGCAGCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATaGGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGGG +
Preference number: 1 (lower is better)
Translates to: EGSSPDQPYGEASRA*AYIPDFSIKLIPNG
Trigger: CCCATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGCTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR TCA 90 bp CACAATTGTCCCCAGCTGGGCATTAGATCACATTGGGCCCCACCCTaGAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCT +
Preference number: 1 (lower is better)
Translates to: HNCPQLGIRSHWAPP*NNPSSQTSDISQSA
Trigger: AGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTGGGGCCCAATGTGATCTAATGCCCAGCTGGGGACAATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 90 bp AAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTaGTCTATTCTAACACCTTTAATGGGAAAGGAGTTAGGAGCATGT +
Preference number: 1 (lower is better)
Translates to: KAHQPIPLLWKRDTL*SILTPLMGKELGAC
Trigger: ACATGCTCCTAACTCCTTTCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR GCA 90 bp GATAAGACCCTTGTGAGTATTTGGGTAGGAGACCAAAAGCATTTCTaGAAAGGGTACACAATTAGCCCTGCTTATAGAGTGGGGGCAGCT +
Preference number: 1 (lower is better)
Translates to: DKTLVSIWVGDQKHF*KGYTISPAYRVGAA
Trigger: AGCTGCCCCCACTCTATAAGCAGGGCTAATTGTGTACCCTTTGCAGAAATGCTTTTGGTCTCCTACCCAAATACTCACAAGGGTCTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 90 bp GGCTGGGAAGTTTCCTGGCAGAAATTATTTACCTCAGAAAGACACTaGCTTTTCTCTTACCCTCGTTTTAAAGTCTACCTGGTCCCTAAA +
Preference number: 1 (lower is better)
Translates to: GWEVSWQKLFTSERH*LFSYPRFKVYLVPK
Trigger: TTTAGGGACCAGGTAGACTTTAAAACGAGGGTAAGAGAAAAGCCAGTGTCTTTCTGAGGTAAATAATTTCTGCCAGGAAACTTCCCAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 90 bp TCTATTCTAACACCTTTAATGGGAAAGGAGTTAGGAGCATGTCCCTaGCTTCAAGAAATCTCTGAATCTCCAACTCTACTGGATGATTTC +
Preference number: 1 (lower is better)
Translates to: SILTPLMGKELGACP*LQEISESPTLLDDF
Trigger: GAAATCATCCAGTAGAGTTGGAGATTCAGAGATTTCTTGAAGCCAGGGACATGCTCCTAACTCCTTTCCCATTAAAGGTGTTAGAATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGGCAGCTGTGACCCGCTaGCCACTCCTGGGAGGGGGC +
Preference number: 2 (lower is better)
Translates to: APLTSHMERPLGHELTFQAAVTR*PLLGGG
Trigger: GCCCCCTCCCAGGAGTGGTCAGCGGGTCACAGCTGC...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CAA 90 bp GGCCTCTCAGACCAACCCCTGAGCCTCTCTCCAGAAGTCATAGCCTaGGTTCAGCCCAGAGCACCCACATCCCAGGGTGGGTGGGGGAGA +
Preference number: 2 (lower is better)
Translates to: GLSDQPLSLSPEVIA*VQPRAPTSQGGWGR
Trigger: TCTCCCCCACCCACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAGGCTCAGGGGTTGGTCTGAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATCTGTCAGCCTGTCTGTaGGGAGGTAGAGTCGGGGGC +
Preference number: 2 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHLSACL*GGRVGG
Trigger: GCCCCCGACTCTACCTCCTCACAGACAGGCTGACAG...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATTCCCCACACAGCTTCTaGCGGCTGGGGCAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHSPHSF*RLGQER
Trigger: CCTTTCCTGCCCCAGCCGGCAGAAGCTGTGTGGGGA...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGTCCCCACACAGCTTCTaGCGGCTGGGGCAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: LPEGTPADPITVEKGHPLSPHSF*RLGQER
Trigger: CCTTTCCTGCCCCAGCCGGCAGAAGCTGTGTGGGGA...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGGAAAACCTAGCTCCCTaGGGGGTGGATGGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: APLTSHMERPLGHELTFQENLAP*GVDGRP
Trigger: AGGCCTGCCATCCACCCCTCAGGGAGCTAGGTTTTC...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGAGTCAGAAGACTGGATaGGCCTCCCTAGGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMSQKTG*ASLGPA
Trigger: AGCTGGGCCTAGGGAGGCCCATCCAGTCTTCTGACT...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTGCCTTTCCCTGGACTTaGCCACCTCACCTGCAGCCT +
Preference number: 2 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGAFPWT*PPHLQP
Trigger: AGGCTGCAGGTGAGGTGGCCAAGTCCAGGGAAAGGC...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGCAGCCCCCACCACAGTaGGGAAACCAAGGATGTAGC +
Preference number: 2 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMQPPPQ*GNQGCS
Trigger: GCTACATCCTTGGTTTCCCCACTGTGGTGGGGGCTG...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATTCCCTGAGGGGTGGATaGCAGGCCTCTCAGACCAAC +
Preference number: 2 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHSLRGG*QASQTN
Trigger: GTTGGTCTGAGAGGCCTGCCATCCACCCCTCAGGGA...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATGGGAGGGGGCTAACTTaGGGGCCCAGGAATTTGAGC +
Preference number: 2 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHGRGLT*GPRNLS
Trigger: GCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCC...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CAA 90 bp AAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATGAGCTaGTGTCCTGCACTGAATCTGAGGCTTAGCCTGGGAGGTCTAGCC +
Preference number: 2 (lower is better)
Translates to: KSGGFKCHWQDGGMS*CPALNLRLSLGGLA
Trigger: GGCTAGACCTCCCAGGCTAAGCCTCAGATTCAGTGCAGGACACAAGCTCATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTCTGGAACATGGACAGTaGTGGGCCTGTCTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGLEHGQ*WACLQR
Trigger: CCTCTGCAGACAGGCCCATCACTGTCCATGTTCCAG...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATCACAGCCATGACAGCTaGCCCCATGCTCCTGTCTGT +
Preference number: 2 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHHSHDS*PHAPVC
Trigger: ACAGACAGGAGCATGGGGGCAGCTGTCATGGCTGTG...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGACAGCTTCTGCCGGCTaGGGCAGGAAAGGCGAGGAG +
Preference number: 2 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTTASAG*GRKGEE
Trigger: CTCCTCGCCTTTCCTGCCCCAGCCGGCAGAAGCTGT...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATGACCGGCAGCTCAGCTaGAGATGTGAGGCCAAGAAC +
Preference number: 2 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHDRQLS*RCEAKN
Trigger: GTTCTTGGCCTCACATCTCCAGCTGAGCTGCCGGTC...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATCTACCTGCCCTAGGATaGCTCCCTGGGACCATCTCT +
Preference number: 2 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHLPALG*LPGTIS
Trigger: AGAGATGGTCCCAGGGAGCCATCCTAGGGCAGGTAG...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACAGGAAAGGGGTCTCCTaGGCAGGTGGCTCCTGTTTC +
Preference number: 2 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHRKGVS*AGGSCF
Trigger: GAAACAGGAGCCACCTGCTCAGGAGACCCCTTTCCT...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGCAAGGCAGAAACTCTaGGGAAAAGTGCCCGCCACA +
Preference number: 2 (lower is better)
Translates to: LPEGTPADPITVEKGHPLARQKL*GKVPAT
Trigger: TGTGGCGGGCACTTTTCCTCAGAGTTTCTGCCTTGC...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTCTTGGCCACCTCACCTaGAGCCTTCTTGTGAGAGGT +
Preference number: 2 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGLGHLT*SLLVRG
Trigger: ACCTCTCACAAGAAGGCTGCAGGTGAGGTGGCCAAG...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTTCAGGACCCCAGGCCTaGAGAGGTAACATGAGTTCC +
Preference number: 2 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGSGPQA*RGNMSS
Trigger: GGAACTCATGTTACCTCTGCAGGCCTGGGGTCCTGA...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGGCCTTTCCCTGGACTTaGCCACCTCACCTGCAGCCT +
Preference number: 2 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTAFPWT*PPHLQP
Trigger: AGGCTGCAGGTGAGGTGGCCAAGTCCAGGGAAAGGC...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACCTACCTGCCCTAGGATaGCTCCCTGGGACCATCTCT +
Preference number: 2 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHLPALG*LPGTIS
Trigger: AGAGATGGTCCCAGGGAGCCATCCTAGGGCAGGTAG...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGGACCCTTCTTTACAGTaGGGCTGCCTCTGCCTACCA +
Preference number: 2 (lower is better)
Translates to: APLTSHMERPLGHELTFQDPSLQ*GCLCLP
Trigger: TGGTAGGCAGAGGCAGCCCCACTGTAAAGAAGGGTC...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGTGGCACATGGCTAAATaGCAGCCCAGTGGAGACCTC +
Preference number: 2 (lower is better)
Translates to: LPEGTPADPITVEKGHPLWHMAK*QPSGDL
Trigger: GAGGTCTCCACTGGGCTGCCATTTAGCCATGTGCCA...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGCCTGCAGCCTTCTTGTaGGAGGTCAGAAGTCAGAAG +
Preference number: 2 (lower is better)
Translates to: LPEGTPADPITVEKGHPLPAAFL*EVRSQK
Trigger: CTTCTGACTTCTGACCTCTCACAAGAAGGCTGCAGG...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGCTGGAACATGGACAGTaGTGGGCCTGTCTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTLEHGQ*WACLQR
Trigger: CCTCTGCAGACAGGCCCATCACTGTCCATGTTCCAG...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGAGGAAAGGGGTCTCCTaGGCAGGTGGCTCCTGTTTC +
Preference number: 2 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTRKGVS*AGGSCF
Trigger: GAAACAGGAGCCACCTGCTCAGGAGACCCCTTTCCT...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGGGGGGCCCAGGAATTTaGGCAAATGATGAGGCACAA +
Preference number: 2 (lower is better)
Translates to: APLTSHMERPLGHELTFQGGPGI*ANDEAQ
Trigger: TTGTGCCTCATCATTTGCTCAAATTCCTGGGCCCCC...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGTTGGAAACCCAGACCTaGCCTGGAACATGGACAGTG +
Preference number: 2 (lower is better)
Translates to: APLTSHMERPLGHELTFQLETQT*PGTWTV
Trigger: CACTGTCCATGTTCCAGGGCAGGTCTGGGTTTCCAA...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTGCTGAAGGGACAATGTaGGATGATCAAGCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGAEGTM*DDQASG
Trigger: CCCAGAGGCTTGATCATCCCACATTGTCCCTTCAGC...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGGCAAGGCAGAAACTCTaGGGAAAAGTGCCCGCCACA +
Preference number: 2 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTARQKL*GKVPAT
Trigger: TGTGGCGGGCACTTTTCCTCAGAGTTTCTGCCTTGC...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGAGGGACAATGTGGGATaGTCAAGCCTCTGGGGGAAC +
Preference number: 2 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTRDNVG*SSLWGN
Trigger: GTTCCCCCAGAGGCTTGATCATCCCACATTGTCCCT...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTAGCCTCAGTGCTACCTaGCCTAGGATGGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPSLSAT*PRMAPW
Trigger: CCAGGGAGCCATCCTAGGGCAGGTAGCACTGAGGCT...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTCAGTGGGGCTGCCTCTaGCTACCAAGTCCTTGGTGC +
Preference number: 2 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPQWGCL*LPSPWC
Trigger: GCACCAAGGACTTGGTAGGCAGAGGCAGCCCCACTG...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGATTCCCAATGGGTCCTaGAGGCCCCTTCTTCCTTTT +
Preference number: 2 (lower is better)
Translates to: LPEGTPADPITVEKGHPLIPNGS*RPLLPF
Trigger: AAAAGGAAGAAGGGGCCTGCAGGACCCATTGGGAAT...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATCCTGGGCCCCTCCCTTaGAAACCCAGACCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHPGPLP*KPRPAL
Trigger: CAGGGCAGGTCTGGGTTTCCAAGGGAGGGGCCCAGG...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGTTAGCTGTGAAGGCCTaGTCTGCCATGAAGACCTCT +
Preference number: 2 (lower is better)
Translates to: LPEGTPADPITVEKGHPLLAVKA*SAMKTS
Trigger: AGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAA...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CAA 90 bp GAGGGAGAACAAAGTCAGAACCATCCTAAAGCCAGTTTTTCAAGCTaGACCACCTCCCTCTTCCTCCCTGAAGGCACACCAGCCGATCCC +
Preference number: 2 (lower is better)
Translates to: EGEQSQNHPKASFSS*TTSLFLPEGTPADP
Trigger: GGGATCGGCTGGTGTGCCTTCAGGGAGGAAGAGGGAGGTGGTCAAGCTTGAAAAACTGGCTTTAGGATGGTTCTGACTTTGTTCTCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTCACAGCCATGACAGCTaGCCCCATGCTCCTGTCTGT +
Preference number: 2 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPHSHDS*PHAPVC
Trigger: ACAGACAGGAGCATGGGGGCAGCTGTCATGGCTGTG...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACCTACCAAGTCCTTGGTaGAAAATGGCTCCTGGACCA +
Preference number: 2 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHLPSPW*KMAPGP
Trigger: TGGTCCAGGAGCCATTTTGCACCAAGGACTTGGTAG...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGTCTTTACAGTGGGGCTaGCTCTGCCTACCAAGTCCT +
Preference number: 2 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTSLQWG*LCLPSP
Trigger: AGGACTTGGTAGGCAGAGGCAGCCCCACTGTAAAGA...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGACCTGGGCCCCTCCCTTaGAAACCCAGACCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGPGPLP*KPRPAL
Trigger: CAGGGCAGGTCTGGGTTTCCAAGGGAGGGGCCCAGG...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTACCAAGGATGTAGCCTaGGCCCCTCCCTTGGAAACC +
Preference number: 2 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPTKDVA*APPLET
Trigger: GGTTTCCAAGGGAGGGGCCCAGGCTACATCCTTGGT...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGTCCCTGAGGGGTGGATaGCAGGCCTCTCAGACCAAC +
Preference number: 2 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRSLRGG*QASQTN
Trigger: GTTGGTCTGAGAGGCCTGCCATCCACCCCTCAGGGA...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAGGGAGGGGGCTAACTTaGGGGCCCAGGAATTTGAGC +
Preference number: 2 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGGRGLT*GPRNLS
Trigger: GCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCC...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTTGTCCAATGTCCCTGTaGAGGCAGAGGGGCTGTCAG +
Preference number: 2 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPCPMSL*RQRGCQ
Trigger: CTGACAGCCCCTCTGCCTGCACAGGGACATTGGACA...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACGGGAGCTTGTCTCTaGTGGACCATTTTTACATCT +
Preference number: 2 (lower is better)
Translates to: APLTSHMERPLGHELTFQTGACL*WTIFTS
Trigger: AGATGTAAAAATGGTCCAGCAGAGACAAGCTCCCGT...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATCAGTGGGGCTGCCTCTaGCTACCAAGTCCTTGGTGC +
Preference number: 2 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHQWGCL*LPSPWC
Trigger: GCACCAAGGACTTGGTAGGCAGAGGCAGCCCCACTG...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTCAGGACCCCAGGCCTaGAGAGGTAACATGAGTTCC +
Preference number: 2 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPSGPQA*RGNMSS
Trigger: GGAACTCATGTTACCTCTGCAGGCCTGGGGTCCTGA...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGATTCCCAATGGGTCCTaGAGGCCCCTTCTTCCTTTT +
Preference number: 2 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTIPNGS*RPLLPF
Trigger: AAAAGGAAGAAGGGGCCTGCAGGACCCATTGGGAAT...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCACAGCTTCTGCCGGCTaGGGCAGGAAAGGCGAGGAG +
Preference number: 2 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFTASAG*GRKGEE
Trigger: CTCCTCGCCTTTCCTGCCCCAGCCGGCAGAAGCTGT...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTAGTCAGAAGACTGGATaGGCCTCCCTAGGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPSQKTG*ASLGPA
Trigger: AGCTGGGCCTAGGGAGGCCCATCCAGTCTTCTGACT...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGGCATTATGTGCTTCTTaGTACGTCGAGGGTCCTAAT +
Preference number: 2 (lower is better)
Translates to: APLTSHMERPLGHELTFQALCAS*YVEGPN
Trigger: ATTAGGACCCTCGACGTACCAAGAAGCACATAATGC...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTACCAAGGATGTAGCCTaGGCCCCTCCCTTGGAAACC +
Preference number: 2 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPTKDVA*APPLET
Trigger: GGTTTCCAAGGGAGGGGCCCAGGCTACATCCTTGGT...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGGACCGGCAGCTCAGCTaGAGATGTGAGGCCAAGAAC +
Preference number: 2 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRDRQLS*RCEAKN
Trigger: GTTCTTGGCCTCACATCTCCAGCTGAGCTGCCGGTC...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGTGCCTACCAAGTCCTTaGTGCAAAATGGCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTCLPSP*CKMAPG
Trigger: TCCAGGAGCCATTTTGCACCAAGGACTTGGTAGGCA...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGCCCGCTGACCACTCCTaGGAGGGGGCTAACTTGGGG +
Preference number: 2 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMPADHS*EGANLG
Trigger: CCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGCGGG...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGCCTTCAATAACATGGTaGAAAAATTCCTCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: LPEGTPADPITVEKGHPLPSITW*KNSSQG
Trigger: TCCCTGGGAGGAATTTTTTCACCATGTTATTGAAGG...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATCAGAAGTCAGAAGACTaGATGGGCCTCCCTAGGCCC +
Preference number: 2 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHQKSED*MGLPRP
Trigger: GGGCCTAGGGAGGCCCATCCAGTCTTCTGACTTCTG...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAAGCATTCTAGCAGACTaGACAGCCCCTCAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGSILAD*TAPQSP
Trigger: GGGACTCTGAGGGGCTGTCCAGTCTGCTAGAATGCT...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGGTCCTTGGTGCAAAATaGCTCCTGGACCAGCGCAAG +
Preference number: 2 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRVLGAK*LLDQRK
Trigger: CTTGCGCTGGTCCAGGAGCCATTTTGCACCAAGGAC...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGAAAATTAGCCGGGCGTaGTGGTGCATGTCTATAGTC +
Preference number: 2 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTKISRA*WCMSIV
Trigger: GACTATAGACATGCACCACCACGCCCGGCTAATTTT...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGCTTCCATTAGGAAGGTaGGGACCACCCCTTATCCAC +
Preference number: 2 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRLPLGR*GPPLIH
Trigger: GTGGATAAGGGGTGGTCCTCACCTTCCTAATGGAAG...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGCGTTTACTAGAACCATaGGGCCTAAGTGCAATTAGC +
Preference number: 2 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTRLLEP*GLSAIS
Trigger: GCTAATTGCACTTAGGCCTCATGGTTCTAGTAAACG...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATAGGGACAATGTGGGATaGTCAAGCCTCTGGGGGAAC +
Preference number: 2 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHRDNVG*SSLWGN
Trigger: GTTCCCCCAGAGGCTTGATCATCCCACATTGTCCCT...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTCATTGGGCCCCACCCTaGAATAATCCCTCGTCTCAA +
Preference number: 2 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPHWAPP*NNPSSQ
Trigger: TTGAGACGAGGGATTATTTCAGGGTGGGGCCCAATG...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAGGGGGCCCAGGAATTTaGGCAAATGATGAGGCACAA +
Preference number: 2 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGGGPGI*ANDEAQ
Trigger: TTGTGCCTCATCATTTGCTCAAATTCCTGGGCCCCC...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGATTGGAAACCCAGACCTaGCCTGGAACATGGACAGTG +
Preference number: 2 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGLETQT*PGTWTV
Trigger: CACTGTCCATGTTCCAGGGCAGGTCTGGGTTTCCAA...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGGACCAAAAGCATTTCTaGAAAGGGTACACAATTAGC +
Preference number: 2 (lower is better)
Translates to: APLTSHMERPLGHELTFQDQKHF*KGYTIS
Trigger: GCTAATTGTGTACCCTTTGCAGAAATGCTTTTGGTC...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGACAGCCCCCACCACAGTaGGGAAACCAAGGATGTAGC +
Preference number: 2 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGQPPPQ*GNQGCS
Trigger: GCTACATCCTTGGTTTCCCCACTGTGGTGGGGGCTG...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATGTCCTTGGTGCAAAATaGCTCCTGGACCAGCGCAAG +
Preference number: 2 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHVLGAK*LLDQRK
Trigger: CTTGCGCTGGTCCAGGAGCCATTTTGCACCAAGGAC...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGGCTGAAGGGACAATGTaGGATGATCAAGCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRAEGTM*DDQASG
Trigger: CCCAGAGGCTTGATCATCCCACATTGTCCCTTCAGC...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATCTTCCATTAGGAAGGTaGGGACCACCCCTTATCCAC +
Preference number: 2 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHLPLGR*GPPLIH
Trigger: GTGGATAAGGGGTGGTCCTCACCTTCCTAATGGAAG...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGACTACCAAGTCCTTGGTaGAAAATGGCTCCTGGACCA +
Preference number: 2 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGLPSPW*KMAPGP
Trigger: TGGTCCAGGAGCCATTTTGCACCAAGGACTTGGTAG...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGAAGCATTCTAGCAGACTaGACAGCCCCTCAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGSILAD*TAPQSP
Trigger: GGGACTCTGAGGGGCTGTCCAGTCTGCTAGAATGCT...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGCCTAGGATGGCTCCCTaGGACCATCTCTGGGACAGA +
Preference number: 2 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMPRMAP*DHLWDR
Trigger: TCTGTCCCAGAGATGGTCCCAGGGAGCCATCCTAGG...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCGACCCTTCTTTACAGTaGGGCTGCCTCTGCCTACCA +
Preference number: 2 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFDPSLQ*GCLCLP
Trigger: TGGTAGGCAGAGGCAGCCCCACTGTAAAGAAGGGTC...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTTTAGCTGTGAAGGCCTaGTCTGCCATGAAGACCTCT +
Preference number: 2 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPLAVKA*SAMKTS
Trigger: AGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAA...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCTGCAGCCTTCTTGTaGGAGGTCAGAAGTCAGAAG +
Preference number: 2 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFPAAFL*EVRSQK
Trigger: CTTCTGACTTCTGACCTCTCACAAGAAGGCTGCAGG...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp ACTCAACCTGAAATAAATACAAAGGCATTATGTGCTTCTTGGTACGTCGAGGGTTGTCCAATGTCCCTGTaGAGGCAGAGGGGCTGTCAG +
Preference number: 2 (lower is better)
Translates to: TQPEINTKALCASWYVEGCPMSL*RQRGCQ
Trigger: CTGACAGCCCCTCTGCCTGCACAGGGACATTGGACA...ACCCTCGACGTACCAAGAAGCACATAATGCCTTTGTATTTATTTCAGGTTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGTGATGGGCCTGTCTaGAGAGGTCTCACTAAAAAC +
Preference number: 2 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRSDGPV*RGLTKN
Trigger: GTTTTTAGTGAGACCTCTGCAGACAGGCCCATCACT...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAAGTGATGGGCCTGTCTaGAGAGGTCTCACTAAAAAC +
Preference number: 2 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGSDGPV*RGLTKN
Trigger: GTTTTTAGTGAGACCTCTGCAGACAGGCCCATCACT...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCTGTGAAGGCCTGGTCTaGCATGAAGACCTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFCEGLV*HEDLSL
Trigger: CAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACA...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCGTGCAAAATGGCTCCTaGACCAGCGCAAGGCAGAAA +
Preference number: 2 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFVQNGS*TSARQK
Trigger: TTTCTGCCTTGCGCTGGTCCAGGAGCCATTTTGCAC...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATTGCCTACCAAGTCCTTaGTGCAAAATGGCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHCLPSP*CKMAPG
Trigger: TCCAGGAGCCATTTTGCACCAAGGACTTGGTAGGCA...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGTGGCACATGGCTAAATaGCAGCCCAGTGGAGACCTC +
Preference number: 2 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMWHMAK*QPSGDL
Trigger: GAGGTCTCCACTGGGCTGCCATTTAGCCATGTGCCA...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGGGAGTCAAACACCTCTaGCTTCAGAGATGGCACATG +
Preference number: 2 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMGVKHL*LQRWHM
Trigger: CATGTGCCATCTCTGAAGTCAGAGGTGTTTGACTCC...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCACAATTGTCCCCAGCTaGGCATTAGATCACATTGGG +
Preference number: 2 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFTIVPS*ALDHIG
Trigger: CCCAATGTGATCTAATGCCCAGCTGGGGACAATTGT...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTACCCTTGTGAGTATTTaGGTAGGAGACCAAAAGCAT +
Preference number: 2 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPTLVSI*VGDQKH
Trigger: ATGCTTTTGGTCTCCTACCCAAATACTCACAAGGGT...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGACGTTTACTAGAACCATaGGGCCTAAGTGCAATTAGC +
Preference number: 2 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGRLLEP*GLSAIS
Trigger: GCTAATTGCACTTAGGCCTCATGGTTCTAGTAAACG...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTCTTCTTCCTTTTCTCTaGTGTAATTCTTGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPLLPFL*CNSWGK
Trigger: CTTTCCCCAAGAATTACATCAGAGAAAAGGAAGAAG...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGATACAAAGGCATTATGTaGTTCTTGGTACGTCGAGGG +
Preference number: 2 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGYKGIM*FLVRRG
Trigger: CCCTCGACGTACCAAGAAGCACATAATGCCTTTGTA...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTGACCAAAAGCATTTCTaGAAAGGGTACACAATTAGC +
Preference number: 2 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPDQKHF*KGYTIS
Trigger: GCTAATTGTGTACCCTTTGCAGAAATGCTTTTGGTC...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTAAAAGGGACACCCTCTaGTCTATTCTAACACCTTTA +
Preference number: 2 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPKRDTL*SILTPL
Trigger: TAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTT...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR TCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCTTCAATAACATGGTaGAAAAATTCCTCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFPSITW*KNSSQG
Trigger: TCCCTGGGAGGAATTTTTTCACCATGTTATTGAAGG...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGACGGGAGCTTGTCTCTaGTGGACCATTTTTACATCT +
Preference number: 2 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMTGACL*WTIFTS
Trigger: AGATGTAAAAATGGTCCAGCAGAGACAAGCTCCCGT...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR GCA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGAAACTTTTCTAAAAAGTaGTGTCCAGCTGAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGNFSKK*CPAEPL
Trigger: CAGAGGCTCAGCTGGACAGCACTTTTTAGAAAAGTT...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 72 bp AGGAGCCTCAGTGCTACCTGCCCTAGGATGGCTCCCTaGGACCATCTCTGGGACAGAGGCGACCAGGAAGCC +
Preference number: 3 (lower is better)
Translates to: RSLSATCPRMAP*DHLWDRGDQEA
Trigger: GGCTTCCTGGTCGCCTCTGTCCCAGAGATGGTCCCAGGGAGCCATCCTAGGGCAGGTAGCACTGAGGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR GCA 72 bp GGTGGCTCCTGTTTCCACAGGAGCCTCAGTGCTACCTaGCCTAGGATGGCTCCCTGGGACCATCTCTGGGAC +
Preference number: 3 (lower is better)
Translates to: GGSCFHRSLSAT*PRMAPWDHLWD
Trigger: GTCCCAGAGATGGTCCCAGGGAGCCATCCTAGGGCAGGTAGCACTGAGGCTCCTGTGGAAACAGGAGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 72 bp GTTTCCACAGGAGCCTCAGTGCTACCTGCCCTAGGATaGCTCCCTGGGACCATCTCTGGGACAGAGGCGACC +
Preference number: 3 (lower is better)
Translates to: VSTGASVLPALG*LPGTISGTEAT
Trigger: GGTCGCCTCTGTCCCAGAGATGGTCCCAGGGAGCCATCCTAGGGCAGGTAGCACTGAGGCTCCTGTGGAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CAA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACGCCTGGGCCCCTCCCTaGGAAACCCAGACCTGCCCT +
Preference number: 3 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHAWAPP*ETQTCP
Trigger: AGGGCAGGTCTGGGTTTCCAAGGGAGGGGCCCAGGC...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 72 bp GTACCATTCATATCTCCCCACACAGCTTCTGCCGGCTaGGGCAGGAAAGGCGAGGAGACCCCATGCCCTGAG +
Preference number: 3 (lower is better)
Translates to: VPFISPHTASAG*GRKGEETPCPE
Trigger: CTCAGGGCATGGGGTCTCCTCGCCTTTCCTGCCCCAGCCGGCAGAAGCTGTGTGGGGAGATATGAATGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 72 bp CAGAGGCGACCAGGAAGCCAAGACCGGCAGCTCAGCTaGAGATGTGAGGCCAAGAACAGGGGAAGAGGCAAA +
Preference number: 3 (lower is better)
Translates to: QRRPGSQDRQLS*RCEAKNRGRGK
Trigger: TTTGCCTCTTCCCCTGTTCTTGGCCTCACATCTCCAGCTGAGCTGCCGGTCTTGGCTTCCTGGTCGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CAA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATTGGGAGGGGGCTAACTaGGGGGCCCAGGAATTTGAG +
Preference number: 3 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHWEGAN*GAQEFE
Trigger: CTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCA...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CAA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATGGGAGGTCTAGCCCCTaGGCCAGGCAAGGTGTGAAA +
Preference number: 3 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHGRSSP*ARQGVK
Trigger: TTTCACACCTTGCCTGGCCAAGGGGCTAGACCTCCC...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR TCA 72 bp GGGAGAGGTAAGGACTTCCTCAGGAAAGGGGTCTCCTaGGCAGGTGGCTCCTGTTTCCACAGGAGCCTCAGT +
Preference number: 3 (lower is better)
Translates to: GRGKDFLRKGVS*AGGSCFHRSLS
Trigger: ACTGAGGCTCCTGTGGAAACAGGAGCCACCTGCTCAGGAGACCCCTTTCCTGAGGAAGTCCTTACCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 72 bp AGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTaGCAAGACGGGGGCATGAGCTTGTGTCCTGCACTG +
Preference number: 3 (lower is better)
Translates to: STLWKSGGFKCH*QDGGMSLCPAL
Trigger: CAGTGCAGGACACAAGCTCATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CAA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTGCCTGGGCCCCTCCCTaGGAAACCCAGACCTGCCCT +
Preference number: 3 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPAWAPP*ETQTCP
Trigger: AGGGCAGGTCTGGGTTTCCAAGGGAGGGGCCCAGGC...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CAA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGCTGCCTACCAAGTCCTaGGTGCAAAATGGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: APLTSHMERPLGHELTFQLPTKS*VQNGSW
Trigger: CCAGGAGCCATTTTGCACCAAGGACTTGGTAGGCAG...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR GCA 72 bp TTACAGTGGGGCTGCCTCTGCCTACCAAGTCCTTGGTaGAAAATGGCTCCTGGACCAGCGCAAGGCAGAAAC +
Preference number: 3 (lower is better)
Translates to: LQWGCLCLPSPW*KMAPGPAQGRN
Trigger: GTTTCTGCCTTGCGCTGGTCCAGGAGCCATTTTGCACCAAGGACTTGGTAGGCAGAGGCAGCCCCACTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR GCA 72 bp ACCATGTTCTCTCGGTTCCAGCTCACCCTCGAAAAGTaGCACAGGCAAGGTTCTTCAGCTCACCCAGGAGCC +
Preference number: 3 (lower is better)
Translates to: TMFSRFQLTLEK*HRQGSSAHPGA
Trigger: GGCTCCTGGGTGAGCTGAAGAACCTTGCCTGTGGCACTTTTCGAGGGTGAGCTGGAACCGAGAGAACATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 72 bp TCTTTACAGTGGGGCTGCCTCTGCCTACCAAGTCCTTaGTGCAAAATGGCTCCTGGACCAGCGCAAGGCAGA +
Preference number: 3 (lower is better)
Translates to: SLQWGCLCLPSP*CKMAPGPAQGR
Trigger: TCTGCCTTGCGCTGGTCCAGGAGCCATTTTGCACCAAGGACTTGGTAGGCAGAGGCAGCCCCACTGTAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CAA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGGGCCTTTCCCTGGACTaGGCCACCTCACCTGCAGCC +
Preference number: 3 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRGLSLD*ATSPAA
Trigger: GGCTGCAGGTGAGGTGGCCAAGTCCAGGGAAAGGCC...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CAA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGCCAGAAGTCATAGCCTaGGTTCAGCCCAGAGCACCC +
Preference number: 3 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTPEVIA*VQPRAP
Trigger: GGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGG...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CAA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGGACCCTTGTGAGTATTaGGGTAGGAGACCAAAAGCA +
Preference number: 3 (lower is better)
Translates to: APLTSHMERPLGHELTFQDPCEY*GRRPKA
Trigger: TGCTTTTGGTCTCCTACCCAAATACTCACAAGGGTC...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 72 bp TCCTCCCTGAAGGCACACCAGCCGATCCCATTACTGTaGAAAAGGGACACCCTCTGGTCTATTCTAACACCT +
Preference number: 3 (lower is better)
Translates to: SSLKAHQPIPLL*KRDTLWSILTP
Trigger: AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CAA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGGGCCTTTCCCTGGACTaGGCCACCTCACCTGCAGCC +
Preference number: 3 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMGLSLD*ATSPAA
Trigger: GGCTGCAGGTGAGGTGGCCAAGTCCAGGGAAAGGCC...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CAA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGACCAGAAGTCATAGCCTaGGTTCAGCCCAGAGCACCC +
Preference number: 3 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGPEVIA*VQPRAP
Trigger: GGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGG...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CAA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTCTGCCTACCAAGTCCTaGGTGCAAAATGGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPLPTKS*VQNGSW
Trigger: CCAGGAGCCATTTTGCACCAAGGACTTGGTAGGCAG...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR TCA 72 bp GGCAAAAGGGCCCACAGCTGCCGTTTACTAGAACCATaGGGCCTAAGTGCAATTAGCATTCTAGCAGACTGG +
Preference number: 3 (lower is better)
Translates to: GKRAHSCRLLEP*GLSAISILADW
Trigger: CCAGTCTGCTAGAATGCTAATTGCACTTAGGCCTCATGGTTCTAGTAAACGGCAGCTGTGGGCCCTTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR TCA 72 bp CCCCAGCTGGGCATTAGATCACATTGGGCCCCACCCTaGAATAATCCCTCGTCTCAAACTTCAGACATCAGT +
Preference number: 3 (lower is better)
Translates to: PQLGIRSHWAPP*NNPSSQTSDIS
Trigger: ACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTGGGGCCCAATGTGATCTAATGCCCAGCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR TCA 72 bp CAGTTTTTCAAGCTTGACCACCTCCCTCTTCCTCCCTaGAGGCACACCAGCCGATCCCATTACTGTGGAAAA +
Preference number: 3 (lower is better)
Translates to: QFFKLDHLPLPP*RHTSRSHYCGK
Trigger: TTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAGGAAGAGGGAGGTGGTCAAGCTTGAAAAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 72 bp ATGGTCACTGAGGATCCTCGTGGGAGAATAGGGTTCTaGGACCTCAGGATACAATCACAAGAACCAGAAAGC +
Preference number: 3 (lower is better)
Translates to: MVTEDPRGRIGF*DLRIQSQEPES
Trigger: GCTTTCTGGTTCTTGTGATTGTATCCTGAGGTCCCAGAACCCTATTCTCCCACGAGGATCCTCAGTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR-3UTR CAA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGGTTTTCCACGGGAGCTaGTCTCTGCTGGACCATTTT +
Preference number: 3 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRVFHGS*SLLDHF
Trigger: AAAATGGTCCAGCAGAGACAAGCTCCCGTGGAAAAC...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR TCA 72 bp TCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATaGGCTTACATTCCAGACTTCAGTATTAAACTCATT +
Preference number: 3 (lower is better)
Translates to: SPDQPYGEASRA*AYIPDFSIKLI
Trigger: AATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 72 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTaGTCTATTCTAACACCTTTAATGGGAAAGGAGTTA +
Preference number: 3 (lower is better)
Translates to: QPIPLLWKRDTL*SILTPLMGKEL
Trigger: TAACTCCTTTCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR GCA 72 bp CTTGTGAGTATTTGGGTAGGAGACCAAAAGCATTTCTaGAAAGGGTACACAATTAGCCCTGCTTATAGAGTG +
Preference number: 3 (lower is better)
Translates to: LVSIWVGDQKHF*KGYTISPAYRV
Trigger: CACTCTATAAGCAGGGCTAATTGTGTACCCTTTGCAGAAATGCTTTTGGTCTCCTACCCAAATACTCACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CCA 72 bp CAACCTGAAATAAATACAAAGGCATTATGTGCTTCTTaGTACGTCGAGGGTCCTAATTACCCCTCAAAAGGA +
Preference number: 3 (lower is better)
Translates to: QPEINTKALCAS*YVEGPNYPSKG
Trigger: TCCTTTTGAGGGGTAATTAGGACCCTCGACGTACCAAGAAGCACATAATGCCTTTGTATTTATTTCAGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGGGCCGGCAGCCGGCCTaGCGGCAGGCATCGCACAAC +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQGRQPA*RQASHN
Trigger: GTTGTGCGATGCCTGCCGGCAGGCCGGCTGCCGGCC...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGTGGCCCTCGGGTCCGTaGGGAGTGGCGTCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMWPSGP*GVASRQ
Trigger: CTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCA...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATGGCGGTGGGGCCTGCTaGGGGGTTGGCGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHGGGAC*GVGAGA
Trigger: AGCACCAGCGCCAACCCCCCAGCAGGCCCCACCGCC...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGGCGGTGGGGCCTGCTaGGGGGTTGGCGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LPEGTPADPITVEKGHPLGGGAC*GVGAGA
Trigger: AGCACCAGCGCCAACCCCCCAGCAGGCCCCACCGCC...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTTCGGCGGAGACGCGATaGGCTGGGATGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGSAETR*AGMGRG
Trigger: CCCCCTCCCCATCCCAGCGCATCGCGTCTCCGCCGA...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGAGATCGCCCGGCGGCTaGGGTGGTGGCACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQRSPGG*GGGTAR
Trigger: CCTGGCAGTGCCACCACCGCAGCCGCCGGGCGATCT...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTCCGCCAATGGACGCCTaGGGGGCAAGGCCGGACCCT +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGPPMDA*GARPDP
Trigger: AGGGTCCGGCCTTGCCCCGCAGGCGTCCATTGGCGG...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGTGGCCCTCGGGTCCGTaGGGAGTGGCGTCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LPEGTPADPITVEKGHPLWPSGP*GVASRQ
Trigger: CTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCA...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGCTGCGGTGGTGGCACTaGCAGGGGCTGTCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: LPEGTPADPITVEKGHPLLRWWH*QGLSRP
Trigger: GGGACGAGACAGCCCCTGGCAGTGCCACCACCGCAG...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGCAAGGCCTCGGCACCTaGGGTCCGGCCGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTQGLGT*GPAGSG
Trigger: CCCAGAGCCGGCCGGACCCCAGGTGCCGAGGCCTTG...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACCGGGTCCGTGGGGAGTaGCGTCGAGGCAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHRVRGE*RRGRCL
Trigger: CAGGCACCTGCCTCGACGCCACTCCCCACGGACCCG...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATCAGGAGCCAGCAGGCTaGCCAGGCGTGTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHQEPAG*PGVWPP
Trigger: TGGTGGCCACACGCCTGGCCAGCCTGCTGGCTCCTG...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTCAGGAGCCAGCAGGCTaGCCAGGCGTGTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGQEPAG*PGVWPP
Trigger: TGGTGGCCACACGCCTGGCCAGCCTGCTGGCTCCTG...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGAGATCGCCCGGCGGCTaGGGTGGTGGCACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTRSPGG*GGGTAR
Trigger: CCTGGCAGTGCCACCACCGCAGCCGCCGGGCGATCT...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACCTGCGGGTTCCGGTaGTGCCGCCTTTCACACGGC +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQTCGFR*CRLSHG
Trigger: GCCGTGTGAAAGGCGGCAGCACCGGAACCCGCAGGT...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTACCACCTTCGGGGTCTaGCCAGCGGCCGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGTTFGV*PAAEAK
Trigger: CTTGGCTTCGGCCGCTGGGCAGACCCCGAAGGTGGT...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGTGCTGCAGGAGTGGGTaGGGCAGCTCCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LPEGTPADPITVEKGHPLCCRSG*GSSSRL
Trigger: CAGCCTGCTGGAGCTGCCGCACCCACTCCTGCAGCA...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGATGGCCACAGCTCTGTaGGGCTCATCGCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMMATAL*GSSRAP
Trigger: TGGTGCCCGCGATGAGCCCCACAGAGCTGTGGCCAT...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGGGAGGCCATCCACTCTaGTGCACTTCCCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQGGHPL*CTSPWG
Trigger: CCCCCAAGGGGAAGTGCATCAGAGTGGATGGCCTCC...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGCGCTGGTGCTGGCACTaGGGATGCTGTGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQRWCWH*GCCGLH
Trigger: ATGGAGCCCACAGCATCCTCAGTGCCAGCACCAGCG...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGCTGTCAGCCTGTCTGTaGGGAGGTAGAGTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LPEGTPADPITVEKGHPLLSACL*GGRVGG
Trigger: GCCCCCGACTCTACCTCCTCACAGACAGGCTGACAG...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGCTCCCTCTTCCTCCCTaGAGGCACACCAGCCGATCC +
Preference number: 4 (lower is better)
Translates to: LPEGTPADPITVEKGHPLLPLPP*RHTSRS
Trigger: GGATCGGCTGGTGTGCCTTCAGGGAGGAAGAGGGAG...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGCTGCGGTGGTGGCACTaGCAGGGGCTGTCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTLRWWH*QGLSRP
Trigger: GGGACGAGACAGCCCCTGGCAGTGCCACCACCGCAG...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTAAGGCCCGGGGCCCTTaGAGCATAGCGAGTAAGGCG +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGKARGP*SIASKA
Trigger: CGCCTTACTCGCTATGCTGCAAGGGCCCCGGGCCTT...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTGGCCGGCAGCCGGCCTaGCGGCAGGCATCGCACAAC +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPGRQPA*RQASHN
Trigger: GTTGTGCGATGCCTGCCGGCAGGCCGGCTGCCGGCC...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTTGGTCCTCAGTCTGCTaGAGGAGTGGGTGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGWSSVC*RSGCGS
Trigger: GCTGCCGCACCCACTCCTGCAGCAGACTGAGGACCA...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTTTAGAGATCGCCGCTTaGAGATCGCCCGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGLEIAA*RSPGGC
Trigger: GCAGCCGCCGGGCGATCTCCAAGCGGCGATCTCTAA...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTATGGCCACAGCTCTGTaGGGCTCATCGCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGMATAL*GSSRAP
Trigger: TGGTGCCCGCGATGAGCCCCACAGAGCTGTGGCCAT...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACGCTGCTGAGGCCGGATaGCCACAGCTCTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHAAEAG*PQLCGA
Trigger: AGCCCCACAGAGCTGTGGCCATCCGGCCTCAGCAGC...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGAGGCATCGCACAACTTaGCCCTCGGGTCCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQRHRTT*PSGPWG
Trigger: TCCCCACGGACCCGAGGGCCAAGTTGTGCGATGCCT...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGGTGCTGCTGCTGGGCTaGGCAGAGTCAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTVLLLG*AESGLG
Trigger: CCCCAGCCCTGACTCTGCCCAGCCCAGCAGCAGCAC...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGGGTCGGTGCTGCTGCTaGGCTGGGCAGAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTGRCCC*AGQSQG
Trigger: GCCCTGACTCTGCCCAGCCCAGCAGCAGCACCGACC...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGGTCGGGGACAGGAACTaGTCCTCAGTCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMVGDRN*SSVCCR
Trigger: CCTGCAGCAGACTGAGGACCAGTTCCTGTCCCCGAC...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CAA 72 bp AGTGGGGAAACCAAGGATGTAGCCTGGGCCCCTCCCTaGGAAACCCAGACCTGCCCTGGAACATGGACAGTG +
Preference number: 4 (lower is better)
Translates to: SGETKDVAWAPP*ETQTCPGTWTV
Trigger: CACTGTCCATGTTCCAGGGCAGGTCTGGGTTTCCAAGGGAGGGGCCCAGGCTACATCCTTGGTTTCCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGAGGATGGGGAGAAGCTaGTCAGAGGGGAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQRMGRS*SEGSCT
Trigger: CGTGCAGCTCCCCTCTGATCAGCTTCTCCCCATCCT...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGAACTGGTCCTCAGTCTaGTGCAGGAGTGGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: LPEGTPADPITVEKGHPLNWSSV*CRSGCG
Trigger: GCCGCACCCACTCCTGCAGCAGACTGAGGACCAGTT...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGAGCCTCAGTGCTACCTaGCCTAGGATGGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQSLSAT*PRMAPW
Trigger: CCAGGGAGCCATCCTAGGGCAGGTAGCACTGAGGCT...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGACAAGGCCTCGGCACCTaGGGTCCGGCCGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGQGLGT*GPAGSG
Trigger: CCCAGAGCCGGCCGGACCCCAGGTGCCGAGGCCTTG...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACTTAGAGATCGCCGCTTaGAGATCGCCCGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHLEIAA*RSPGGC
Trigger: GCAGCCGCCGGGCGATCTCCAAGCGGCGATCTCTAA...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGGCCTTTCCCTGGACTTaGCCACCTCACCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQAFPWT*PPHLQP
Trigger: AGGCTGCAGGTGAGGTGGCCAAGTCCAGGGAAAGGC...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGCCTAGGATGGCTCCCTaGGACCATCTCTGGGACAGA +
Preference number: 4 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMPRMAP*DHLWDR
Trigger: TCTGTCCCAGAGATGGTCCCAGGGAGCCATCCTAGG...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGGGCGTGTGGCCACCATaGTCACTGAGGATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQGVWPP*SLRILV
Trigger: CACGAGGATCCTCAGTGACCATGGTGGCCACACGCC...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGCAGGACCCCATCCTCTaGCTCGCTCAGGAGGTAAAT +
Preference number: 4 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMQDPIL*LAQEVN
Trigger: ATTTACCTCCTGAGCGAGTCAGAGGATGGGGTCCTG...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGTGGCCTTCTTGCGGATaGGCTGGATGCCTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQWPSCG*AGCLPA
Trigger: TGCTGGAAGGCATCCAGCTCATCCGCAAGAAGGCCA...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTCTGCACCGACTTCCTTaGGGCTCGCTCTCTAGTCCT +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGLHRLP*GSLSSP
Trigger: AGGACTAGAGAGCGAGCCGCAAGGAAGTCGGTGCAG...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTTCGGCGGAGACGCGATaGGCTGGGATGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPSAETR*AGMGRG
Trigger: CCCCCTCCCCATCCCAGCGCATCGCGTCTCCGCCGA...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGGAGGGGTCCCCGGCGTaGCCTCAAGCTCGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLREGSPA*PQARRR
Trigger: TCTCCGCCGAGCTTGAGGGCACGCCGGGGACCCCTC...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTCCGCCAATGGACGCCTaGGGGGCAAGGCCGGACCCT +
Preference number: 4 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPPPMDA*GARPDP
Trigger: AGGGTCCGGCCTTGCCCCGCAGGCGTCCATTGGCGG...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGTGCCCCAGCTGTTGCTaGTTCCCAGGTCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTCPSCC*FPGLVG
Trigger: CCCCACCAGACCTGGGAAGCAGCAACAGCTGGGGCA...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATTGTCCAATGTCCCTGTaGAGGCAGAGGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHCPMSL*RQRGCQ
Trigger: CTGACAGCCCCTCTGCCTGCACAGGGACATTGGACA...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGCACAGCCATGACAGCTaGCCCCATGCTCCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LPEGTPADPITVEKGHPLHSHDS*PHAPVC
Trigger: ACAGACAGGAGCATGGGGGCAGCTGTCATGGCTGTG...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGAGCCGGGCGTGGTGGTaGATGTCTATAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQSRAWW*MSIVPA
Trigger: AGCTGGGACTATAGACATGCACCACCACGCCCGGCT...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGCGGGTCCGTGGGGAGTaGCGTCGAGGCAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRRVRGE*RRGRCL
Trigger: CAGGCACCTGCCTCGACGCCACTCCCCACGGACCCG...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACCAGCTCTGGATGAGCTaGTCCAAGGCCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHQLWMS*SKACSV
Trigger: CACGGAGCAGGCCTTGGACCAGCTCATCCAGAGCTG...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATCAGAAGTCAGAAGACTaGATGGGCCTCCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHQKSED*MGLPRP
Trigger: GGGCCTAGGGAGGCCCATCCAGTCTTCTGACTTCTG...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGCTACCTGCCCTAGGATaGCTCCCTGGGACCATCTCT +
Preference number: 4 (lower is better)
Translates to: LPEGTPADPITVEKGHPLLPALG*LPGTIS
Trigger: AGAGATGGTCCCAGGGAGCCATCCTAGGGCAGGTAG...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGTGGCACATGGCTAAATaGCAGCCCAGTGGAGACCTC +
Preference number: 4 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMWHMAK*QPSGDL
Trigger: GAGGTCTCCACTGGGCTGCCATTTAGCCATGTGCCA...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTAAATACCACTCAGGCTaGGCCTGGTGGCTCGTGCCT +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGKYHSG*AWWLVP
Trigger: AGGCACGAGCCACCAGGCCCAGCCTGAGTGGTATTT...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATGGCTGCTGGTGGGGCTaGGAAGTTTCCTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHGCWWG*EVSWQK
Trigger: TTTCTGCCAGGAAACTTCCCAGCCCCACCAGCAGCC...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATCCTCAGTCAGGTGCTTaGAGCTCAGAGAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHPQSGA*SSESSS
Trigger: AGAGCTGCTCTCTGAGCTTCAAGCACCTGACTGAGG...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTCCTCAGTCAGGTGCTTaGAGCTCAGAGAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGPQSGA*SSESSS
Trigger: AGAGCTGCTCTCTGAGCTTCAAGCACCTGACTGAGG...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGTCTGCGGAGGGGCCTTaGCGGCAATCACTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTSAEGP*RQSLSA
Trigger: AGCAGACAGTGATTGCCGTCAAGGCCCCTCCGCAGA...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGCCTGCAGCCTTCTTGTaGGAGGTCAGAAGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMPAAFL*EVRSQK
Trigger: CTTCTGACTTCTGACCTCTCACAAGAAGGCTGCAGG...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATCTGCAGAATGGAGGTTaGGAACACTTGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHLQNGG*EHLGRE
Trigger: CTCCCTCCCCAAGTGTTCTCAACCTCCATTCTGCAG...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTTGCGGGTTCCGGTGCTaGCGCCTTTCACACGGCCCG +
Preference number: 4 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPCGFRC*RLSHGP
Trigger: CGGGCCGTGTGAAAGGCGGCAGCACCGGAACCCGCA...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGACTTCCAGTCTCGTCTaGGGAGGGGCCTTGACGGCA +
Preference number: 4 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTTSSLV*GGALTA
Trigger: TGCCGTCAAGGCCCCTCCGCAGACGAGACTGGAAGT...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGAGCCTCAGTGCTACCTaGCCTAGGATGGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTSLSAT*PRMAPW
Trigger: CCAGGGAGCCATCCTAGGGCAGGTAGCACTGAGGCT...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATCACACAACACCTGGATaGTGGGGCACCCAAACCCTT +
Preference number: 4 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHHTTPG*WGTQTL
Trigger: AAGGGTTTGGGTGCCCCAGCATCCAGGTGTTGTGTG...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTCTACCCAAAAGGGCTTaGCGCGCCCGCGGACACCTG +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPLPKRA*RARGHL
Trigger: CAGGTGTCCGCGGGCGCGCCAAGCCCTTTTGGGTAG...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGCCCCTGCCTACCCACTaGATGTTGTTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LPEGTPADPITVEKGHPLPLPTH*MLFLAF
Trigger: GAAGGCCAAGAACAACATCCAGTGGGTAGGCAGGGG...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTAGGCCAGCCTCTTGTTaGCCTTGTCCTCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGRPASC*PCPQSG
Trigger: ACCTGACTGAGGACAAGGCCAACAAGAGGCTGGCCT...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTGTGCTGCTGCTGGGCTaGGCAGAGTCAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPVLLLG*AESGLG
Trigger: CCCCAGCCCTGACTCTGCCCAGCCCAGCAGCAGCAC...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTGTCCTGGTCCAAGGATaGGGAGAAGCTGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGVLVQG*GEADQR
Trigger: CCTCTGATCAGCTTCTCCCCATCCTTGGACCAGGAC...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTAGCATTCTAGCAGACTaGACAGCCCCTCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGSILAD*TAPQSP
Trigger: GGGACTCTGAGGGGCTGTCCAGTCTGCTAGAATGCT...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATGTCCTTGGTGCAAAATaGCTCCTGGACCAGCGCAAG +
Preference number: 4 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHVLGAK*LLDQRK
Trigger: CTTGCGCTGGTCCAGGAGCCATTTTGCACCAAGGAC...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTGACCCTTCTTTACAGTaGGGCTGCCTCTGCCTACCA +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGDPSLQ*GCLCLP
Trigger: TGGTAGGCAGAGGCAGCCCCACTGTAAAGAAGGGTC...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACGGCTTCAAGTGTCACTaGCAAGACGGGGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHGFKCH*QDGGMS
Trigger: GCTCATGCCCCCGTCTTGCCAGTGACACTTGAAGCC...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATAAGCCACACAACACCTaGATGCTGGGGCACCCAAAC +
Preference number: 4 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHKPHNT*MLGHPN
Trigger: GTTTGGGTGCCCCAGCATCCAGGTGTTGTGTGGCTT...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
3UTR CAA 72 bp GGCTTCAAGTGTCACTGGCAAGACGGGGGCATGAGCTaGTGTCCTGCACTGAATCTGAGGCTTAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GFKCHWQDGGMS*CPALNLRLSLG
Trigger: TCCCAGGCTAAGCCTCAGATTCAGTGCAGGACACAAGCTCATGCCCCCGTCTTGCCAGTGACACTTGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTGGAGGCCATCCACTCTaGTGCACTTCCCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPGGHPL*CTSPWG
Trigger: CCCCCAAGGGGAAGTGCATCAGAGTGGATGGCCTCC...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGCTTCCATTAGGAAGGTaGGGACCACCCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQLPLGR*GPPLIH
Trigger: GTGGATAAGGGGTGGTCCTCACCTTCCTAATGGAAG...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATCATTGGGCCCCACCCTaGAATAATCCCTCGTCTCAA +
Preference number: 4 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHHWAPP*NNPSSQ
Trigger: TTGAGACGAGGGATTATTTCAGGGTGGGGCCCAATG...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGAGCAGCTGTGACCCGCTaGCCACTCCTGGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGAAVTR*PLLGGG
Trigger: GCCCCCTCCCAGGAGTGGTCAGCGGGTCACAGCTGC...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGGGAGTCAAACACCTCTaGCTTCAGAGATGGCACATG +
Preference number: 4 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMGVKHL*LQRWHM
Trigger: CATGTGCCATCTCTGAAGTCAGAGGTGTTTGACTCC...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGGAGGCCTCTAGGGCATaGGCTTACATTCCAGACTTC +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQEASRA*AYIPDF
Trigger: GAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTC...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTAGGTGGTGGATCACTTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGRWWIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAAGTGATCCACCACCT...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATTGCGGGTTCCGGTGCTaGCGCCTTTCACACGGCCCG +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHCGFRC*RLSHGP
Trigger: CGGGCCGTGTGAAAGGCGGCAGCACCGGAACCCGCA...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGACCACCTTCGGGGTCTaGCCAGCGGCCGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRTTFGV*PAAEAK
Trigger: CTTGGCTTCGGCCGCTGGGCAGACCCCGAAGGTGGT...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGGGACTGTCCGGCTCCTaGACCTCCTCTGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRGLSGS*TSSGHR
Trigger: CCTGTGCCCAGAGGAGGTGCAGGAGCCGGACAGTCC...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAGGACTGTCCGGCTCCTaGACCTCCTCTGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGGLSGS*TSSGHR
Trigger: CCTGTGCCCAGAGGAGGTGCAGGAGCCGGACAGTCC...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTGGTCCTCAGTCTGCTaGAGGAGTGGGTGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPWSSVC*RSGCGS
Trigger: GCTGCCGCACCCACTCCTGCAGCAGACTGAGGACCA...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTTTGGAAACCCAGACCTaGCCTGGAACATGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGLETQT*PGTWTV
Trigger: CACTGTCCATGTTCCAGGGCAGGTCTGGGTTTCCAA...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTTTCTTGCGGATGAGCTaGATGCCTTCCAGCACGTTG +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGFLRMS*MPSSTL
Trigger: CAACGTGCTGGAAGGCATCCAGCTCATCCGCAAGAA...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATGGTCGGTGCTGCTGCTaGGCTGGGCAGAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHGRCCC*AGQSQG
Trigger: GCCCTGACTCTGCCCAGCCCAGCAGCAGCACCGACC...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTCCTGGGCCCCTCCCTTaGAAACCCAGACCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPPGPLP*KPRPAL
Trigger: CAGGGCAGGTCTGGGTTTCCAAGGGAGGGGCCCAGG...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGGTGCAAAATGGCTCCTaGACCAGCGCAAGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQVQNGS*TSARQK
Trigger: TTTCTGCCTTGCGCTGGTCCAGGAGCCATTTTGCAC...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACGACCCTTCTTTACAGTaGGGCTGCCTCTGCCTACCA +
Preference number: 4 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHDPSLQ*GCLCLP
Trigger: TGGTAGGCAGAGGCAGCCCCACTGTAAAGAAGGGTC...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGCTGAAGGGACAATGTaGGATGATCAAGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LPEGTPADPITVEKGHPLAEGTM*DDQASG
Trigger: CCCAGAGGCTTGATCATCCCACATTGTCCCTTCAGC...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACTGGCACATGGCTAAATaGCAGCCCAGTGGAGACCTC +
Preference number: 4 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHWHMAK*QPSGDL
Trigger: GAGGTCTCCACTGGGCTGCCATTTAGCCATGTGCCA...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGCCGATCCCATTACTGTaGAAAAGGGACACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQPIPLL*KRDTLW
Trigger: CCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGG...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACACAACACCTGGATGCTaGGGCACCCAAACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHTTPGC*GTQTLS
Trigger: GGAAAGGGTTTGGGTGCCCCAGCATCCAGGTGTTGT...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGCCCTTGGGTGCTCTTaGGATATATCTGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LPEGTPADPITVEKGHPLALGCS*DISAGC
Trigger: ACAACCTGCAGATATATCTCAAGAGCACCCAAGGGC...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTGAAAACCTAGCTCCCTaGGGGGTGGATGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPENLAP*GVDGRP
Trigger: AGGCCTGCCATCCACCCCTCAGGGAGCTAGGTTTTC...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTGGAGTCAAACACCTCTaGCTTCAGAGATGGCACATG +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGGVKHL*LQRWHM
Trigger: CATGTGCCATCTCTGAAGTCAGAGGTGTTTGACTCC...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGCTCCCTCTTCCTCCCTaGAGGCACACCAGCCGATCC +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRLPLPP*RHTSRS
Trigger: GGATCGGCTGGTGTGCCTTCAGGGAGGAAGAGGGAG...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAAAGGCCCGGGGCCCTTaGAGCATAGCGAGTAAGGCG +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGKARGP*SIASKA
Trigger: CGCCTTACTCGCTATGCTGCAAGGGCCCCGGGCCTT...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGTTGTCCTCAGTCAGGTaGTTGAAGCTCAGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LPEGTPADPITVEKGHPLLSSVR*LKLREQ
Trigger: CTGCTCTCTGAGCTTCAAGCACCTGACTGAGGACAA...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTACTTCCAGTCTCGTCTaGGGAGGGGCCTTGACGGCA +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPTSSLV*GGALTA
Trigger: TGCCGTCAAGGCCCCTCCGCAGACGAGACTGGAAGT...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGCTACCAAGTCCTTGGTaGAAAATGGCTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQLPSPW*KMAPGP
Trigger: TGGTCCAGGAGCCATTTTGCACCAAGGACTTGGTAG...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATCTCACCCTCGAAAAGTaGCACAGGCAAGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHLTLEK*HRQGSS
Trigger: TGAAGAACCTTGCCTGTGGCACTTTTCGAGGGTGAG...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGCTCACCCTCGAAAAGTaGCACAGGCAAGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LPEGTPADPITVEKGHPLLTLEK*HRQGSS
Trigger: TGAAGAACCTTGCCTGTGGCACTTTTCGAGGGTGAG...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAAGGCATCGCACAACTTaGCCCTCGGGTCCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGRHRTT*PSGPWG
Trigger: TCCCCACGGACCCGAGGGCCAAGTTGTGCGATGCCT...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGGCTTCCCAGGTCTGGTaGGGTCTTCAAACATTCCCC +
Preference number: 4 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTASQVW*GLQTFP
Trigger: GGGGAATGTTTGAAGACCCCACCAGACCTGGGAAGC...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTCAGCTCTGGATGAGCTaGTCCAAGGCCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPQLWMS*SKACSV
Trigger: CACGGAGCAGGCCTTGGACCAGCTCATCCAGAGCTG...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGGTCCTGGTCCAAGGATaGGGAGAAGCTGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTVLVQG*GEADQR
Trigger: CCTCTGATCAGCTTCTCCCCATCCTTGGACCAGGAC...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAACAGCTTCTGCCGGCTaGGGCAGGAAAGGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGTASAG*GRKGEE
Trigger: CTCCTCGCCTTTCCTGCCCCAGCCGGCAGAAGCTGT...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACATTAGCCGGGCGTGGTaGTGCATGTCTATAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHISRAW*CMSIVP
Trigger: TGGGACTATAGACATGCACCACCACGCCCGGCTAAT...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACCCGATCCCATTACTGTaGAAAAGGGACACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHPIPLL*KRDTLW
Trigger: CCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGG...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGGGGAGAATAGGGTTCTaGGACCTCAGGATACAATCA +
Preference number: 4 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMGRIGF*DLRIQS
Trigger: TGATTGTATCCTGAGGTCCCAGAACCCTATTCTCCC...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATGGCTGGCCAGGCGTGTaGCCACCATGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHGWPGV*PPWSLR
Trigger: CCTCAGTGACCATGGTGGCCACACGCCTGGCCAGCC...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAGAGAGCAGCTCTGGATaGGCTGGTCCAAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGESSSG*AGPRPA
Trigger: AGCAGGCCTTGGACCAGCTCATCCAGAGCTGCTCTC...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGTCTGCGGAGGGGCCTTaGCGGCAATCACTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRSAEGP*RQSLSA
Trigger: AGCAGACAGTGATTGCCGTCAAGGCCCCTCCGCAGA...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAAGTCGAAGAGATCGCTaGTGCCCTCACCCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGSRRDR*CPHPPP
Trigger: TGGAGGCGGGTGAGGGCATCAGCGATCTCTTCGACT...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATCTGTCAGCCTGTCTGTaGGGAGGTAGAGTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHLSACL*GGRVGG
Trigger: GCCCCCGACTCTACCTCCTCACAGACAGGCTGACAG...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGCATTGGGCCCCACCCTaGAATAATCCCTCGTCTCAA +
Preference number: 4 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTHWAPP*NNPSSQ
Trigger: TTGAGACGAGGGATTATTTCAGGGTGGGGCCCAATG...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGTCCAACTCTACTGGATaGTTTCCTGGAGCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTSNSTG*FPGAPS
Trigger: GCTTGGGGCTCCAGGAAATCATCCAGTAGAGTTGGA...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGCTTCAAACATTCCCCTaGCTACCCACTGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQLQTFP*LPTGCC
Trigger: ACAACATCCAGTGGGTAGGCAGGGGAATGTTTGAAG...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGTCCTGCCCCAGCTGTTaGTGCTTCCCAGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRSCPSC*CFPGLV
Trigger: CACCAGACCTGGGAAGCAGCAACAGCTGGGGCAGGA...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCTGCTGCAGGAGTGGGTaGGGCAGCTCCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFCCRSG*GSSSRL
Trigger: CAGCCTGCTGGAGCTGCCGCACCCACTCCTGCAGCA...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGTACAAAGGCATTATGTaGTTCTTGGTACGTCGAGGG +
Preference number: 4 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMYKGIM*FLVRRG
Trigger: CCCTCGACGTACCAAGAAGCACATAATGCCTTTGTA...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTAGTGATGGGCCTGTCTaGAGAGGTCTCACTAAAAAC +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGSDGPV*RGLTKN
Trigger: GTTTTTAGTGAGACCTCTGCAGACAGGCCCATCACT...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGCAGTGGGGCTGCCTCTaGCTACCAAGTCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRQWGCL*LPSPWC
Trigger: GCACCAAGGACTTGGTAGGCAGAGGCAGCCCCACTG...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGGTTTTCACTTCACATaGGCTAAGCCACACAACACC +
Preference number: 4 (lower is better)
Translates to: LPEGTPADPITVEKGHPLGFHFT*AKPHNT
Trigger: GGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACC...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGCAAGAACCAGAAAGCTaGTTCCAAACAACCCCAGAA +
Preference number: 4 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMQEPES*FQTTPE
Trigger: TTCTGGGGTTGTTTGGAAGCAGCTTTCTGGTTCTTG...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp ACTCAACCTGAAATAAATACAAAGGCATTATGTGCTTCTTGGTACGTCGAGGGTGGGGGAAGCCGCCAATaGACGCCTGCGGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: TQPEINTKALCASWYVEGGGSRQ*TPAGQG
Trigger: GCCTTGCCCCGCAGGCGTCCATTGGCGGCTTCCCCC...ACCCTCGACGTACCAAGAAGCACATAATGCCTTTGTATTTATTTCAGGTTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCGTAGCTGGGCAGAGCTaGGGGCTGCTGAGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFVAGQS*GLLRPD
Trigger: ATCCGGCCTCAGCAGCCCCCAGCTCTGCCCAGCTAC...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGAGTAGCTGGGCAGAGCTaGGGGCTGCTGAGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGVAGQS*GLLRPD
Trigger: ATCCGGCCTCAGCAGCCCCCAGCTCTGCCCAGCTAC...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATAGTCTGCTGCAGGAGTaGGTGCGGCAGCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHSLLQE*VRQLQQ
Trigger: CTGCTGGAGCTGCCGCACCCACTCCTGCAGCAGACT...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTCAGAAGTCAGAAGACTaGATGGGCCTCCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPQKSED*MGLPRP
Trigger: GGGCCTAGGGAGGCCCATCCAGTCTTCTGACTTCTG...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAGCCTTTCCCTGGACTTaGCCACCTCACCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGAFPWT*PPHLQP
Trigger: AGGCTGCAGGTGAGGTGGCCAAGTCCAGGGAAAGGC...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGGCATTATGTGCTTCTTaGTACGTCGAGGGTCCTAAT +
Preference number: 4 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMALCAS*YVEGPN
Trigger: ATTAGGACCCTCGACGTACCAAGAAGCACATAATGC...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTGACCGGCAGCTCAGCTaGAGATGTGAGGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPDRQLS*RCEAKN
Trigger: GTTCTTGGCCTCACATCTCCAGCTGAGCTGCCGGTC...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGATCCCTGAGGGGTGGATaGCAGGCCTCTCAGACCAAC +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGSLRGG*QASQTN
Trigger: GTTGGTCTGAGAGGCCTGCCATCCACCCCTCAGGGA...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACAATTGTCCCCAGCTaGGCATTAGATCACATTGGG +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQTIVPS*ALDHIG
Trigger: CCCAATGTGATCTAATGCCCAGCTGGGGACAATTGT...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGGGGAGGGGGCTAACTTaGGGGCCCAGGAATTTGAGC +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRGRGLT*GPRNLS
Trigger: GCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCC...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGACCCGCTGACCACTCCTaGGAGGGGGCTAACTTGGGG +
Preference number: 4 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGPADHS*EGANLG
Trigger: CCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGCGGG...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTGGCTTCAAGTGTCACTaGCAAGACGGGGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPGFKCH*QDGGMS
Trigger: GCTCATGCCCCCGTCTTGCCAGTGACACTTGAAGCC...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAGGCGTGTGGCCACCATaGTCACTGAGGATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGGVWPP*SLRILV
Trigger: CACGAGGATCCTCAGTGACCATGGTGGCCACACGCC...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCGGCTGGCCAGGCGTGTaGCCACCATGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFGWPGV*PPWSLR
Trigger: CCTCAGTGACCATGGTGGCCACACGCCTGGCCAGCC...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATGAGAGCAGCTCTGGATaGGCTGGTCCAAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHESSSG*AGPRPA
Trigger: AGCAGGCCTTGGACCAGCTCATCCAGAGCTGCTCTC...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATAGGATGGGGAGAAGCTaGTCAGAGGGGAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHRMGRS*SEGSCT
Trigger: CGTGCAGCTCCCCTCTGATCAGCTTCTCCCCATCCT...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATCGTTTACTAGAACCATaGGGCCTAAGTGCAATTAGC +
Preference number: 4 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHRLLEP*GLSAIS
Trigger: GCTAATTGCACTTAGGCCTCATGGTTCTAGTAAACG...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTAGGAAAGGGGTCTCCTaGGCAGGTGGCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPRKGVS*AGGSCF
Trigger: GAAACAGGAGCCACCTGCTCAGGAGACCCCTTTCCT...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTGCAAGGCAGAAACTCTaGGGAAAAGTGCCCGCCACA +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPARQKL*GKVPAT
Trigger: TGTGGCGGGCACTTTTCCTCAGAGTTTCTGCCTTGC...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATCTCTTGAGATATATCTaGAGGTTGTCCTCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHLLRYI*RLSSVL
Trigger: CAGGACTGAGGACAACCTGCAGATATATCTCAAGAG...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATAACTGGTCCTCAGTCTaGTGCAGGAGTGGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHNWSSV*CRSGCG
Trigger: GCCGCACCCACTCCTGCAGCAGACTGAGGACCAGTT...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGATCCCCACACAGCTTCTaGCGGCTGGGGCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGSPHSF*RLGQER
Trigger: CCTTTCCTGCCCCAGCCGGCAGAAGCTGTGTGGGGA...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGCAAGAACCAGAAAGCTaGTTCCAAACAACCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LPEGTPADPITVEKGHPLQEPES*FQTTPE
Trigger: TTCTGGGGTTGTTTGGAAGCAGCTTTCTGGTTCTTG...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACACTTCGATGGGCCCTTaGGTGCTCTTGAGATATATC +
Preference number: 4 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHTSMGP*VLLRYI
Trigger: GATATATCTCAAGAGCACCCAAGGGCCCATCGAAGT...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCAGTCTGCTGCAGGAGTaGGTGCGGCAGCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFSLLQE*VRQLQQ
Trigger: CTGCTGGAGCTGCCGCACCCACTCCTGCAGCAGACT...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAAGTCAGAAGACTGGATaGGCCTCCCTAGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGSQKTG*ASLGPA
Trigger: AGCTGGGCCTAGGGAGGCCCATCCAGTCTTCTGACT...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGCCTGGGCCCCTCCCTTaGAAACCCAGACCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMPGPLP*KPRPAL
Trigger: CAGGGCAGGTCTGGGTTTCCAAGGGAGGGGCCCAGG...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGCAGCCCCCACCACAGTaGGGAAACCAAGGATGTAGC +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRQPPPQ*GNQGCS
Trigger: GCTACATCCTTGGTTTCCCCACTGTGGTGGGGGCTG...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAGACCGGCAGCTCAGCTaGAGATGTGAGGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGDRQLS*RCEAKN
Trigger: GTTCTTGGCCTCACATCTCCAGCTGAGCTGCCGGTC...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATGGGAGGGGGCTAACTTaGGGGCCCAGGAATTTGAGC +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHGRGLT*GPRNLS
Trigger: GCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCC...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTAAATACCACTCAGGCTaGGCCTGGTGGCTCGTGCCT +
Preference number: 4 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPKYHSG*AWWLVP
Trigger: AGGCACGAGCCACCAGGCCCAGCCTGAGTGGTATTT...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTACCTCAGAAAGACACTaGCTTTTCTCTTACCCTCGT +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGTSERH*LFSYPR
Trigger: ACGAGGGTAAGAGAAAAGCCAGTGTCTTTCTGAGGT...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGACAGGACCCCATCCTCTaGCTCGCTCAGGAGGTAAAT +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGQDPIL*LAQEVN
Trigger: ATTTACCTCCTGAGCGAGTCAGAGGATGGGGTCCTG...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGCGCTGGTGCTGGCACTaGGGATGCTGTGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMRWCWH*GCCGLH
Trigger: ATGGAGCCCACAGCATCCTCAGTGCCAGCACCAGCG...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTCCAACTCTACTGGATaGTTTCCTGGAGCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPSNSTG*FPGAPS
Trigger: GCTTGGGGCTCCAGGAAATCATCCAGTAGAGTTGGA...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGCTGCAGAATGGAGGTTaGGAACACTTGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRLQNGG*EHLGRE
Trigger: CTCCCTCCCCAAGTGTTCTCAACCTCCATTCTGCAG...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp ACTCAACCTGAAATAAATACAAAGGCATTATGTGCTTCTTGGTACGTCGAGGGTACCTGCGGGTTCCGGTaGTGCCGCCTTTCACACGGC +
Preference number: 4 (lower is better)
Translates to: TQPEINTKALCASWYVEGTCGFR*CRLSHG
Trigger: GCCGTGTGAAAGGCGGCAGCACCGGAACCCGCAGGT...ACCCTCGACGTACCAAGAAGCACATAATGCCTTTGTATTTATTTCAGGTTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGTGCCCCAGCTGTTGCTaGTTCCCAGGTCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMCPSCC*FPGLVG
Trigger: CCCCACCAGACCTGGGAAGCAGCAACAGCTGGGGCA...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATCACAGCCATGACAGCTaGCCCCATGCTCCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHHSHDS*PHAPVC
Trigger: ACAGACAGGAGCATGGGGGCAGCTGTCATGGCTGTG...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTCTTTACAGTGGGGCTaGCTCTGCCTACCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPSLQWG*LCLPSP
Trigger: AGGACTTGGTAGGCAGAGGCAGCCCCACTGTAAAGA...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGTCAGGACCCCAGGCCTaGAGAGGTAACATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRSGPQA*RGNMSS
Trigger: GGAACTCATGTTACCTCTGCAGGCCTGGGGTCCTGA...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGATCAGGACCCCAGGCCTaGAGAGGTAACATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGSGPQA*RGNMSS
Trigger: GGAACTCATGTTACCTCTGCAGGCCTGGGGTCCTGA...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGACACACAACACCTGGATaGTGGGGCACCCAAACCCTT +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGHTTPG*WGTQTL
Trigger: AAGGGTTTGGGTGCCCCAGCATCCAGGTGTTGTGTG...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGACCCCTGCCTACCCACTaGATGTTGTTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGPLPTH*MLFLAF
Trigger: GAAGGCCAAGAACAACATCCAGTGGGTAGGCAGGGG...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGGCCAGCCTCTTGTTaGCCTTGTCCTCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRRPASC*PCPQSG
Trigger: ACCTGACTGAGGACAAGGCCAACAAGAGGCTGGCCT...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATAGTCAGAAGACTGGATaGGCCTCCCTAGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHSQKTG*ASLGPA
Trigger: AGCTGGGCCTAGGGAGGCCCATCCAGTCTTCTGACT...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATCAGCCCCCACCACAGTaGGGAAACCAAGGATGTAGC +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHQPPPQ*GNQGCS
Trigger: GCTACATCCTTGGTTTCCCCACTGTGGTGGGGGCTG...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCATTCTAGCAGACTaGACAGCCCCTCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRSILAD*TAPQSP
Trigger: GGGACTCTGAGGGGCTGTCCAGTCTGCTAGAATGCT...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTACCCTTGTGAGTATTTaGGTAGGAGACCAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGTLVSI*VGDQKH
Trigger: ATGCTTTTGGTCTCCTACCCAAATACTCACAAGGGT...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GCTCCCCTGACCAGCCATATGGAGAGGCCTCTAGGGCATGAGCTTACATTCCAGTTAGGAGCATGTCCCTaGCTTCAAGAAATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: APLTSHMERPLGHELTFQLGACP*LQEISE
Trigger: TTCAGAGATTTCTTGAAGCCAGGGACATGCTCCTAA...CTGGAATGTAAGCTCATGCCCTAGAGGCCTCTCCATATGGCTGGTCAGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAACAACACCTGGATGCTaGGGCACCCAAACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGTTPGC*GTQTLS
Trigger: GGAAAGGGTTTGGGTGCCCCAGCATCCAGGTGTTGT...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAAAGCCACACAACACCTaGATGCTGGGGCACCCAAAC +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGKPHNT*MLGHPN
Trigger: GTTTGGGTGCCCCAGCATCCAGGTGTTGTGTGGCTT...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCTGGAACATGGACAGTaGTGGGCCTGTCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFLEHGQ*WACLQR
Trigger: CCTCTGCAGACAGGCCCATCACTGTCCATGTTCCAG...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGGGGGGCCCAGGAATTTaGGCAAATGATGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRGGPGI*ANDEAQ
Trigger: TTGTGCCTCATCATTTGCTCAAATTCCTGGGCCCCC...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTGAGGCCTCTAGGGCATaGGCTTACATTCCAGACTTC +
Preference number: 4 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPEASRA*AYIPDF
Trigger: GAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTC...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAAGGTGGTGGATCACTTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGRWWIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAAGTGATCCACCACCT...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCGGCCACCATGGTCACTaGGGATCCTCGTGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFGHHGH*GSSWEN
Trigger: ATTCTCCCACGAGGATCCTCAGTGACCATGGTGGCC...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCTGCACCGACTTCCTTaGGGCTCGCTCTCTAGTCCT +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFLHRLP*GSLSSP
Trigger: AGGACTAGAGAGCGAGCCGCAAGGAAGTCGGTGCAG...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGTCCTGCCCCAGCTGTTaGTGCTTCCCAGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMSCPSC*CFPGLV
Trigger: CACCAGACCTGGGAAGCAGCAACAGCTGGGGCAGGA...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTTGTGAAGGCCTGGTCTaGCATGAAGACCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPCEGLV*HEDLSL
Trigger: CAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACA...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATGACCAAAAGCATTTCTaGAAAGGGTACACAATTAGC +
Preference number: 4 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHDQKHF*KGYTIS
Trigger: GCTAATTGTGTACCCTTTGCAGAAATGCTTTTGGTC...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGGTCGGGGACAGGAACTaGTCCTCAGTCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMVGDRN*SSVCCR
Trigger: CCTGCAGCAGACTGAGGACCAGTTCCTGTCCCCGAC...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGACCTAGGATGGCTCCCTaGGACCATCTCTGGGACAGA +
Preference number: 4 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGPRMAP*DHLWDR
Trigger: TCTGTCCCAGAGATGGTCCCAGGGAGCCATCCTAGG...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAGCTGTGAAGGCCTaGTCTGCCATGAAGACCTCT +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPLAVKA*SAMKTS
Trigger: AGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAA...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGGTCATCTCAACACTTTaGGAGGCCGAGGTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRVISTL*EAEVVD
Trigger: ATCCACCACCTCGGCCTCCCAAAGTGTTGAGATGAC...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp ACTCAACCTGAAATAAATACAAAGGCATTATGTGCTTCTTGGTACGTCGAGGGTAGTCGAAGAGATCGCTaGTGCCCTCACCCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TQPEINTKALCASWYVEGSRRDR*CPHPPP
Trigger: TGGAGGCGGGTGAGGGCATCAGCGATCTCTTCGACT...ACCCTCGACGTACCAAGAAGCACATAATGCCTTTGTATTTATTTCAGGTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATCCTGCAGCCTTCTTGTaGGAGGTCAGAAGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHPAAFL*EVRSQK
Trigger: CTTCTGACTTCTGACCTCTCACAAGAAGGCTGCAGG...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCGCAAGGCAGAAACTCTaGGGAAAAGTGCCCGCCACA +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFARQKL*GKVPAT
Trigger: TGTGGCGGGCACTTTTCCTCAGAGTTTCTGCCTTGC...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGAAGGGACAATGTGGGATaGTCAAGCCTCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGRDNVG*SSLWGN
Trigger: GTTCCCCCAGAGGCTTGATCATCCCACATTGTCCCT...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp ACTCAACCTGAAATAAATACAAAGGCATTATGTGCTTCTTGGTACGTCGAGGGTGAAAACCTAGCTCCCTaGGGGGTGGATGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TQPEINTKALCASWYVEGENLAP*GVDGRP
Trigger: AGGCCTGCCATCCACCCCTCAGGGAGCTAGGTTTTC...ACCCTCGACGTACCAAGAAGCACATAATGCCTTTGTATTTATTTCAGGTTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGGGCCACCATGGTCACTaGGGATCCTCGTGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMGHHGH*GSSWEN
Trigger: ATTCTCCCACGAGGATCCTCAGTGACCATGGTGGCC...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGTTGTCCTCAGTCAGGTaGTTGAAGCTCAGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRLSSVR*LKLREQ
Trigger: CTGCTCTCTGAGCTTCAAGCACCTGACTGAGGACAA...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGACTTGGCCACCTCACCTaGAGCCTTCTTGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGLGHLT*SLLVRG
Trigger: ACCTCTCACAAGAAGGCTGCAGGTGAGGTGGCCAAG...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCTTGGCCACCTCACCTaGAGCCTTCTTGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFLGHLT*SLLVRG
Trigger: ACCTCTCACAAGAAGGCTGCAGGTGAGGTGGCCAAG...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGAGCCGGGCGTGGTGGTaGATGTCTATAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMSRAWW*MSIVPA
Trigger: AGCTGGGACTATAGACATGCACCACCACGCCCGGCT...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCGCTTCCCAGGTCTGGTaGGGTCTTCAAACATTCCCC +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFASQVW*GLQTFP
Trigger: GGGGAATGTTTGAAGACCCCACCAGACCTGGGAAGC...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCGTCCTTGGTGCAAAATaGCTCCTGGACCAGCGCAAG +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFVLGAK*LLDQRK
Trigger: CTTGCGCTGGTCCAGGAGCCATTTTGCACCAAGGAC...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTAAAATTAGCCGGGCGTaGTGGTGCATGTCTATAGTC +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPKISRA*WCMSIV
Trigger: GACTATAGACATGCACCACCACGCCCGGCTAATTTT...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTGGGAGAATAGGGTTCTaGGACCTCAGGATACAATCA +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPGRIGF*DLRIQS
Trigger: TGATTGTATCCTGAGGTCCCAGAACCCTATTCTCCC...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp ACTCAACCTGAAATAAATACAAAGGCATTATGTGCTTCTTGGTACGTCGAGGGTAGGAAAGGGGTCTCCTaGGCAGGTGGCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TQPEINTKALCASWYVEGRKGVS*AGGSCF
Trigger: GAAACAGGAGCCACCTGCTCAGGAGACCCCTTTCCT...ACCCTCGACGTACCAAGAAGCACATAATGCCTTTGTATTTATTTCAGGTTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCGGGGGCCCAGGAATTTaGGCAAATGATGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFGGPGI*ANDEAQ
Trigger: TTGTGCCTCATCATTTGCTCAAATTCCTGGGCCCCC...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTAGTGATGGGCCTGTCTaGAGAGGTCTCACTAAAAAC +
Preference number: 4 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPSDGPV*RGLTKN
Trigger: GTTTTTAGTGAGACCTCTGCAGACAGGCCCATCACT...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATCTACCAAGTCCTTGGTaGAAAATGGCTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHLPSPW*KMAPGP
Trigger: TGGTCCAGGAGCCATTTTGCACCAAGGACTTGGTAG...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCTCTTTACAGTGGGGCTaGCTCTGCCTACCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFSLQWG*LCLPSP
Trigger: AGGACTTGGTAGGCAGAGGCAGCCCCACTGTAAAGA...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGGACCAAAAGCATTTCTaGAAAGGGTACACAATTAGC +
Preference number: 4 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTDQKHF*KGYTIS
Trigger: GCTAATTGTGTACCCTTTGCAGAAATGCTTTTGGTC...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATATTCCCAATGGGTCCTaGAGGCCCCTTCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHIPNGS*RPLLPF
Trigger: AAAAGGAAGAAGGGGCCTGCAGGACCCATTGGGAAT...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCTTCTTGCGGATGAGCTaGATGCCTTCCAGCACGTTG +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFFLRMS*MPSSTL
Trigger: CAACGTGCTGGAAGGCATCCAGCTCATCCGCAAGAA...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGAGCTGCTTCCCAGGTCTaGTGGGGTCTTCAAACATTC +
Preference number: 4 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGAASQV*WGLQTF
Trigger: GAATGTTTGAAGACCCCACCAGACCTGGGAAGCAGC...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTACAATTGTCCCCAGCTaGGCATTAGATCACATTGGG +
Preference number: 4 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPTIVPS*ALDHIG
Trigger: CCCAATGTGATCTAATGCCCAGCTGGGGACAATTGT...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCATTAGCCGGGCGTGGTaGTGCATGTCTATAGTCCCA +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFISRAW*CMSIVP
Trigger: TGGGACTATAGACATGCACCACCACGCCCGGCTAAT...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTAAAATTAGCCGGGCGTaGTGGTGCATGTCTATAGTC +
Preference number: 4 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPKISRA*WCMSIV
Trigger: GACTATAGACATGCACCACCACGCCCGGCTAATTTT...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCGTCATCTCAACACTTTaGGAGGCCGAGGTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFVISTL*EAEVVD
Trigger: ATCCACCACCTCGGCCTCCCAAAGTGTTGAGATGAC...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp ACTCAACCTGAAATAAATACAAAGGCATTATGTGCTTCTTGGTACGTCGAGGGTGGCTGCTGGTGGGGCTaGGAAGTTTCCTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: TQPEINTKALCASWYVEGGCWWG*EVSWQK
Trigger: TTTCTGCCAGGAAACTTCCCAGCCCCACCAGCAGCC...ACCCTCGACGTACCAAGAAGCACATAATGCCTTTGTATTTATTTCAGGTTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp ACTCAACCTGAAATAAATACAAAGGCATTATGTGCTTCTTGGTACGTCGAGGGTAGGGACAATGTGGGATaGTCAAGCCTCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: TQPEINTKALCASWYVEGRDNVG*SSLWGN
Trigger: GTTCCCCCAGAGGCTTGATCATCCCACATTGTCCCT...ACCCTCGACGTACCAAGAAGCACATAATGCCTTTGTATTTATTTCAGGTTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGACTTTCCCTAAAACTCTaGACACTGCAGAATGGAGGT +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGLSLKL*TLQNGG
Trigger: ACCTCCATTCTGCAGTGTTCAGAGTTTTAGGGAAAG...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGACGGCAATCACTGTCTaGTCCTTAAAGTTGCCAACA +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRTAITV*SLKLPT
Trigger: TGTTGGCAACTTTAAGGAGCAGACAGTGATTGCCGT...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGACTCTTGAGATATATCTaGAGGTTGTCCTCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGLLRYI*RLSSVL
Trigger: CAGGACTGAGGACAACCTGCAGATATATCTCAAGAG...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGTACAAAGGCATTATGTaGTTCTTGGTACGTCGAGGG +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRYKGIM*FLVRRG
Trigger: CCCTCGACGTACCAAGAAGCACATAATGCCTTTGTA...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGTGTGAAGGCCTGGTCTaGCATGAAGACCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMCEGLV*HEDLSL
Trigger: CAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACA...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGGCTGCTTCCCAGGTCTaGTGGGGTCTTCAAACATTC +
Preference number: 4 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMAASQV*WGLQTF
Trigger: GAATGTTTGAAGACCCCACCAGACCTGGGAAGCAGC...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATACTTCGATGGGCCCTTaGGTGCTCTTGAGATATATC +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHTSMGP*VLLRYI
Trigger: GATATATCTCAAGAGCACCCAAGGGCCCATCGAAGT...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTGCATTATGTGCTTCTTaGTACGTCGAGGGTCCTAAT +
Preference number: 4 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPALCAS*YVEGPN
Trigger: ATTAGGACCCTCGACGTACCAAGAAGCACATAATGC...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTACCCTTGTGAGTATTTaGGTAGGAGACCAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPTLVSI*VGDQKH
Trigger: ATGCTTTTGGTCTCCTACCCAAATACTCACAAGGGT...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAGGAGCATGTCCCTaGCTTCAAGAAATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPLGACP*LQEISE
Trigger: TTCAGAGATTTCTTGAAGCCAGGGACATGCTCCTAA...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGGCCCTTGGGTGCTCTTaGGATATATCTGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMALGCS*DISAGC
Trigger: ACAACCTGCAGATATATCTCAAGAGCACCCAAGGGC...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGACCTTCAATAACATGGTaGAAAAATTCCTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGPSITW*KNSSQG
Trigger: TCCCTGGGAGGAATTTTTTCACCATGTTATTGAAGG...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTCCTTCAATAACATGGTaGAAAAATTCCTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPPSITW*KNSSQG
Trigger: TCCCTGGGAGGAATTTTTTCACCATGTTATTGAAGG...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCGGTTTTCACTTCACATaGGCTAAGCCACACAACACC +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFGFHFT*AKPHNT
Trigger: GGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACC...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGGTTTTAAAGTCTACCTaGTCCCTAAAGAAAATACCA +
Preference number: 4 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTVLKST*SLKKIP
Trigger: TGGTATTTTCTTTAGGGACCAGGTAGACTTTAAAAC...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGACTTTCCCTAAAACTCTaGACACTGCAGAATGGAGGT +
Preference number: 4 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGLSLKL*TLQNGG
Trigger: ACCTCCATTCTGCAGTGTTCAGAGTTTTAGGGAAAG...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp ACTCAACCTGAAATAAATACAAAGGCATTATGTGCTTCTTGGTACGTCGAGGGTTGCCTACCAAGTCCTTaGTGCAAAATGGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: TQPEINTKALCASWYVEGCLPSP*CKMAPG
Trigger: TCCAGGAGCCATTTTGCACCAAGGACTTGGTAGGCA...ACCCTCGACGTACCAAGAAGCACATAATGCCTTTGTATTTATTTCAGGTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp ACTCAACCTGAAATAAATACAAAGGCATTATGTGCTTCTTGGTACGTCGAGGGTTTAGCTGTGAAGGCCTaGTCTGCCATGAAGACCTCT +
Preference number: 4 (lower is better)
Translates to: TQPEINTKALCASWYVEGLAVKA*SAMKTS
Trigger: AGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAA...ACCCTCGACGTACCAAGAAGCACATAATGCCTTTGTATTTATTTCAGGTTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGAACCTCAGAAAGACACTaGCTTTTCTCTTACCCTCGT +
Preference number: 4 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGTSERH*LFSYPR
Trigger: ACGAGGGTAAGAGAAAAGCCAGTGTCTTTCTGAGGT...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAAAAGGGACACCCTCTaGTCTATTCTAACACCTTTA +
Preference number: 4 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRKRDTL*SILTPL
Trigger: TAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTT...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGCGTTTACTAGAACCATaGGGCCTAAGTGCAATTAGC +
Preference number: 4 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMRLLEP*GLSAIS
Trigger: GCTAATTGCACTTAGGCCTCATGGTTCTAGTAAACG...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATCTTCTTCCTTTTCTCTaGTGTAATTCTTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHLLPFL*CNSWGK
Trigger: CTTTCCCCAAGAATTACATCAGAGAAAAGGAAGAAG...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGACGGCAATCACTGTCTaGTCCTTAAAGTTGCCAACA +
Preference number: 4 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMTAITV*SLKLPT
Trigger: TGTTGGCAACTTTAAGGAGCAGACAGTGATTGCCGT...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCAACTTTTCTAAAAAGTaGTGTCCAGCTGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFNFSKK*CPAEPL
Trigger: CAGAGGCTCAGCTGGACAGCACTTTTTAGAAAAGTT...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR TCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCTTCTTCCTTTTCTCTaGTGTAATTCTTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFLLPFL*CNSWGK
Trigger: CTTTCCCCAAGAATTACATCAGAGAAAAGGAAGAAG...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp ACTCAACCTGAAATAAATACAAAGGCATTATGTGCTTCTTGGTACGTCGAGGGTACGGGAGCTTGTCTCTaGTGGACCATTTTTACATCT +
Preference number: 4 (lower is better)
Translates to: TQPEINTKALCASWYVEGTGACL*WTIFTS
Trigger: AGATGTAAAAATGGTCCAGCAGAGACAAGCTCCCGT...ACCCTCGACGTACCAAGAAGCACATAATGCCTTTGTATTTATTTCAGGTTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCAAAAGGGACACCCTCTaGTCTATTCTAACACCTTTA +
Preference number: 4 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFKRDTL*SILTPL
Trigger: TAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTT...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR GCA 90 bp ACTCAACCTGAAATAAATACAAAGGCATTATGTGCTTCTTGGTACGTCGAGGGTAACTTTTCTAAAAAGTaGTGTCCAGCTGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TQPEINTKALCASWYVEGNFSKK*CPAEPL
Trigger: CAGAGGCTCAGCTGGACAGCACTTTTTAGAAAAGTT...ACCCTCGACGTACCAAGAAGCACATAATGCCTTTGTATTTATTTCAGGTTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CCA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGGTTTTAAAGTCTACCTaGTCCCTAAAGAAAATACCA +
Preference number: 4 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMVLKST*SLKKIP
Trigger: TGGTATTTTCTTTAGGGACCAGGTAGACTTTAAAAC...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS GCA 90 bp CCAAAAGGGCTTGGCGCGCCCGCGGACACCTGCGGGTTCCGGTGCTaGCGCCTTTCACACGGCCCGCGGCATGGCGCGGAGGCCGGGGGA +
Preference number: 5 (lower is better)
Translates to: PKGLGAPADTCGFRC*RLSHGPRHGAEAGG
Trigger: TCCCCCGGCCTCCGCGCCATGCCGCGGGCCGTGTGAAAGGCGGCAGCACCGGAACCCGCAGGTGTCCGCGGGCGCGCCAAGCCCTTTTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS CCA 90 bp CACCTGCGGGTTCCGGTGCTGCCGCCTTTCACACGGCCCGCGGCATaGCGCGGAGGCCGGGGGAAGCCGCCAATGGACGCCTGCGGGGCA +
Preference number: 5 (lower is better)
Translates to: HLRVPVLPPFTRPAA*RGGRGKPPMDACGA
Trigger: TGCCCCGCAGGCGTCCATTGGCGGCTTCCCCCGGCCTCCGCGCCATGCCGCGGGCCGTGTGAAAGGCGGCAGCACCGGAACCCGCAGGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS GCA 90 bp AGAGATCGCCGCTTGGAGATCGCCCGGCGGCTGCGGTGGTGGCACTaGCAGGGGCTGTCTCGTCCCGAGGGCACCGCGACCCGGGACGCC +
Preference number: 5 (lower is better)
Translates to: RDRRLEIARRLRWWH*QGLSRPEGTATRDA
Trigger: GGCGTCCCGGGTCGCGGTGCCCTCGGGACGAGACAGCCCCTGGCAGTGCCACCACCGCAGCCGCCGGGCGATCTCCAAGCGGCGATCTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS GCA 90 bp TACCCAAAAGGGCTTGGCGCGCCCGCGGACACCTGCGGGTTCCGGTaGTGCCGCCTTTCACACGGCCCGCGGCATGGCGCGGAGGCCGGG +
Preference number: 5 (lower is better)
Translates to: YPKGLGAPADTCGFR*CRLSHGPRHGAEAG
Trigger: CCCGGCCTCCGCGCCATGCCGCGGGCCGTGTGAAAGGCGGCAGCACCGGAACCCGCAGGTGTCCGCGGGCGCGCCAAGCCCTTTTGGGTA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS CCA 90 bp CTGCCGGCAGGCATCGCACAACTTGGCCCTCGGGTCCGTGGGGAGTaGCGTCGAGGCAGGTGCCTGGCGCCGCTGCGGGAGGCGCCGTCT +
Preference number: 5 (lower is better)
Translates to: LPAGIAQLGPRVRGE*RRGRCLAPLREAPS
Trigger: AGACGGCGCCTCCCGCAGCGGCGCCAGGCACCTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCAAGTTGTGCGATGCCTGCCGGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS GCA 90 bp CTCGGGTCCGTGGGGAGTGGCGTCGAGGCAGGTGCCTGGCGCCGCTaGGGGAGGCGCCGTCTGCGGGTACAGCGGTGTGTAGTAGGTAGC +
Preference number: 5 (lower is better)
Translates to: LGSVGSGVEAGAWRR*GRRRLRVQRCVVGS
Trigger: GCTACCTACTACACACCGCTGTACCCGCAGACGGCGCCTCCCGCAGCGGCGCCAGGCACCTGCCTCGACGCCACTCCCCACGGACCCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS CCA 90 bp AACTTGGCCCTCGGGTCCGTGGGGAGTGGCGTCGAGGCAGGTGCCTaGCGCCGCTGCGGGAGGCGCCGTCTGCGGGTACAGCGGTGTGTA +
Preference number: 5 (lower is better)
Translates to: NLALGSVGSGVEAGA*RRCGRRRLRVQRCV
Trigger: TACACACCGCTGTACCCGCAGACGGCGCCTCCCGCAGCGGCGCCAGGCACCTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCAAGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS CCA 90 bp TTCCTTTTGGCCGGCAGCCGGCCTGCCGGCAGGCATCGCACAACTTaGCCCTCGGGTCCGTGGGGAGTGGCGTCGAGGCAGGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: FLLAGSRPAGRHRTT*PSGPWGVASRQVPG
Trigger: GCCAGGCACCTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCAAGTTGTGCGATGCCTGCCGGCAGGCCGGCTGCCGGCCAAAAGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS GCA 90 bp AGAGAGCAGCGCTTAGAGATCGCCGCTTGGAGATCGCCCGGCGGCTaGGGTGGTGGCACTGCCAGGGGCTGTCTCGTCCCGAGGGCACCG +
Preference number: 5 (lower is better)
Translates to: REQRLEIAAWRSPGG*GGGTARGCLVPRAP
Trigger: CGGTGCCCTCGGGACGAGACAGCCCCTGGCAGTGCCACCACCGCAGCCGCCGGGCGATCTCCAAGCGGCGATCTCTAAGCGCTGCTCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS GCA 90 bp GGGGAGCTGCACGCCAGGGTCGGGGACAGGAACTGGTCCTCAGTCTaGTGCAGGAGTGGGTGCGGCAGCTCCAGCAGGCTGTCAGTAGCC +
Preference number: 5 (lower is better)
Translates to: GELHARVGDRNWSSV*CRSGCGSSSRLSVA
Trigger: GGCTACTGACAGCCTGCTGGAGCTGCCGCACCCACTCCTGCAGCAGACTGAGGACCAGTTCCTGTCCCCGACCCTGGCGTGCAGCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS GCA 90 bp GAGCTGCACGCCAGGGTCGGGGACAGGAACTGGTCCTCAGTCTGCTaGAGGAGTGGGTGCGGCAGCTCCAGCAGGCTGTCAGTAGCCTCC +
Preference number: 5 (lower is better)
Translates to: ELHARVGDRNWSSVC*RSGCGSSSRLSVAS
Trigger: GGAGGCTACTGACAGCCTGCTGGAGCTGCCGCACCCACTCCTGCAGCAGACTGAGGACCAGTTCCTGTCCCCGACCCTGGCGTGCAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGCAGGCATCGCACAACTaGGCCCTCGGGTCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: LPEGTPADPITVEKGHPLQASHN*ALGSVG
Trigger: CCCCACGGACCCGAGGGCCAAGTTGTGCGATGCCTG...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTCTTAGAGATCGCCGCTaGGAGATCGCCCGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGLRDRR*EIARRL
Trigger: CAGCCGCCGGGCGATCTCCAAGCGGCGATCTCTAAG...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTGGCCTTTCCCTGGACTaGGCCACCTCACCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGGLSLD*ATSPAA
Trigger: GGCTGCAGGTGAGGTGGCCAAGTCCAGGGAAAGGCC...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACAGATCCAGCTTCCTTTaGGCCGGCAGCCGGCCTGCC +
Preference number: 5 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHRSSFL*AGSRPA
Trigger: GGCAGGCCGGCTGCCGGCCAAAAGGAAGCTGGATCT...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGCTGATGCACTTCCCCTaGGGGGTTGGGAACTCAGGG +
Preference number: 5 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMLMHFP*GVGNSG
Trigger: CCCTGAGTTCCCAACCCCCAAGGGGAAGTGCATCAG...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGCTCCTGCCCCAGCTGTaGCTGCTTCCCAGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: LPEGTPADPITVEKGHPLLLPQL*LLPRSG
Trigger: ACCAGACCTGGGAAGCAGCAACAGCTGGGGCAGGAG...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACGGCCTTTCCCTGGACTaGGCCACCTCACCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHGLSLD*ATSPAA
Trigger: GGCTGCAGGTGAGGTGGCCAAGTCCAGGGAAAGGCC...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGGCCTGGGCCCCTCCCTaGGAAACCCAGACCTGCCCT +
Preference number: 5 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTAWAPP*ETQTCP
Trigger: AGGGCAGGTCTGGGTTTCCAAGGGAGGGGCCCAGGC...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGTGGGAGGGGGCTAACTaGGGGGCCCAGGAATTTGAG +
Preference number: 5 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMWEGAN*GAQEFE
Trigger: CTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCA...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTCTGATGCACTTCCCCTaGGGGGTTGGGAACTCAGGG +
Preference number: 5 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGLMHFP*GVGNSG
Trigger: CCCTGAGTTCCCAACCCCCAAGGGGAAGTGCATCAG...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGGACGGGGGCATGAGCTaGTGTCCTGCACTGAATCTG +
Preference number: 5 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMDGGMS*CPALNL
Trigger: CAGATTCAGTGCAGGACACAAGCTCATGCCCCCGTC...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGTCCTCAGTCAGGTGCTaGAAGCTCAGAGAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMSSVRC*KLREQL
Trigger: GAGCTGCTCTCTGAGCTTCAAGCACCTGACTGAGGA...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGAGCCTCTTGTTGGCCTaGTCCTCAGTCAGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMSLLLA*SSVRCL
Trigger: CAAGCACCTGACTGAGGACAAGGCCAACAAGAGGCT...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp AAGCACTCTGTGGAAGTCGGGAGGCTTCAAGTGTCACTGGCAAGACGGGGGCATGACGGGGGCATGAGCTaGTGTCCTGCACTGAATCTG +
Preference number: 5 (lower is better)
Translates to: KHSVEVGRLQVSLARRGHDGGMS*CPALNL
Trigger: CAGATTCAGTGCAGGACACAAGCTCATGCCCCCGTC...ATGCCCCCGTCTTGCCAGTGACACTTGAAGCCTCCCGACTTCCACAGAGTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS GCA 90 bp ATCTGCAGGTTGTCCTCAGTCCTGTCGGGCACTTCCAGTCTCGTCTaGGGAGGGGCCTTGACGGCAATCACTGTCTGCTCCTTAAAGTTG +
Preference number: 5 (lower is better)
Translates to: ICRLSSVLSGTSSLV*GGALTAITVCSLKL
Trigger: CAACTTTAAGGAGCAGACAGTGATTGCCGTCAAGGCCCCTCCGCAGACGAGACTGGAAGTGCCCGACAGGACTGAGGACAACCTGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361729.3
ENST00000487237.1
ENST00000634683.2
ENST00000635265.1
CDS-3UTR CAA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGACCTACCCAAAAGGGCTaGGCGCGCCCGCGGACACCT +
Preference number: 5 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGPTQKG*ARPRTP
Trigger: AGGTGTCCGCGGGCGCGCCAAGCCCTTTTGGGTAGG...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp GCTGACCACTCCTGGGAGGGGGCTAACTTGGGGGCCCAGGAATTTGAGCAAATGAGATATATCTGCAGGTaGTCCTCAGTCCTGTCGGGC +
Preference number: 5 (lower is better)
Translates to: ADHSWEGANLGAQEFEQMRYICR*SSVLSG
Trigger: GCCCGACAGGACTGAGGACAACCTGCAGATATATCT...CATTTGCTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCAGGAGTGGTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTCTGCCTACCAAGTCCTaGGTGCAAAATGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGLPTKS*VQNGSW
Trigger: CCAGGAGCCATTTTGCACCAAGGACTTGGTAGGCAG...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp ACTCTACTGGATGATTTCCTGGAGCCCCAAGCTTTAGAAGTCCCTGGGGACACGTGGGAGGGGGCTAACTaGGGGGCCCAGGAATTTGAG +
Preference number: 5 (lower is better)
Translates to: TLLDDFLEPQALEVPGDTWEGAN*GAQEFE
Trigger: CTCAAATTCCTGGGCCCCCAAGTTAGCCCCCTCCCA...CGTGTCCCCAGGGACTTCTAAAGCTTGGGGCTCCAGGAAATCATCCAGTAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTACTTCCCCTTGGGGGTaGGGAACTCAGGGACGACGG +
Preference number: 5 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPTSPWG*GTQGRR
Trigger: CCGTCGTCCCTGAGTTCCCAACCCCCAAGGGGAAGT...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTAGATATATCTGCAGGTaGTCCTCAGTCCTGTCGGGC +
Preference number: 5 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGRYICR*SSVLSG
Trigger: GCCCGACAGGACTGAGGACAACCTGCAGATATATCT...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CTCCCTGAAGGCACACCAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGCCAGTTTTTCAAGCTaGACCACCTCCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LPEGTPADPITVEKGHPLASFSS*TTSLFL
Trigger: GAGGAAGAGGGAGGTGGTCAAGCTTGAAAAACTGGC...CAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTGGTGTGCCTTCAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCTACCCAAAAGGGCTaGGCGCGCCCGCGGACACCT +
Preference number: 5 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFPTQKG*ARPRTP
Trigger: AGGTGTCCGCGGGCGCGCCAAGCCCTTTTGGGTAGG...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAACTTCCCCTTGGGGGTaGGGAACTCAGGGACGACGG +
Preference number: 5 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGTSPWG*GTQGRR
Trigger: CCGTCGTCCCTGAGTTCCCAACCCCCAAGGGGAAGT...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp TGCTGGACTTTAAGACGGGCGTCTGATAAGACCCTTGTGAGTATTTGGGTAGGAGTCTGCGGAGGGGCCTaGACGGCAATCACTGTCTGC +
Preference number: 5 (lower is better)
Translates to: CWTLRRASDKTLVSIWVGVCGGA*TAITVC
Trigger: GCAGACAGTGATTGCCGTCAAGGCCCCTCCGCAGAC...TCCTACCCAAATACTCACAAGGGTCTTATCAGACGCCCGTCTTAAAGTCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGAGCCTGGGCCCCTCCCTaGGAAACCCAGACCTGCCCT +
Preference number: 5 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGAWAPP*ETQTCP
Trigger: AGGGCAGGTCTGGGTTTCCAAGGGAGGGGCCCAGGC...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CTCTCCCCATTAGCTGTGAAGGCCTGGTCTGCCATGAAGACCTCTCTCTGTCACGACTTCGATGGGCCCTaGGGTGCTCTTGAGATATAT +
Preference number: 5 (lower is better)
Translates to: LSPLAVKAWSAMKTSLCHDFDGP*GALEIY
Trigger: ATATATCTCAAGAGCACCCAAGGGCCCATCGAAGTC...GTGACAGAGAGAGGTCTTCATGGCAGACCAGGCCTTCACAGCTAATGGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CTCTCTCCAGAAGTCATAGCCTTGGTTCAGCCCAGAGCACCCACATCCCAGGGTGACCCTTGTGAGTATTaGGGTAGGAGACCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: LSPEVIALVQPRAPTSQGDPCEY*GRRPKA
Trigger: TGCTTTTGGTCTCCTACCCAAATACTCACAAGGGTC...ACCCTGGGATGTGGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGGGGAGGTCTAGCCCCTaGGCCAGGCAAGGTGTGAAA +
Preference number: 5 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRGRSSP*ARQGVK
Trigger: TTTCACACCTTGCCTGGCCAAGGGGCTAGACCTCCC...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGCTTAGAGATCGCCGCTaGGAGATCGCCCGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMLRDRR*EIARRL
Trigger: CAGCCGCCGGGCGATCTCCAAGCGGCGATCTCTAAG...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCGTCTGCGGAGGGGCCTaGACGGCAATCACTGTCTGC +
Preference number: 5 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFVCGGA*TAITVC
Trigger: GCAGACAGTGATTGCCGTCAAGGCCCCTCCGCAGAC...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCTCTTGTTGGCCTaGTCCTCAGTCAGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRSLLLA*SSVRCL
Trigger: CAAGCACCTGACTGAGGACAAGGCCAACAAGAGGCT...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CACCCTGAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGCACTGGATGTTGTTCTaGGCCTTCTTGCGGATGAGC +
Preference number: 5 (lower is better)
Translates to: HPEIIPRLKLQTSVSQLRHWMLF*AFLRMS
Trigger: GCTCATCCGCAAGAAGGCCAAGAACAACATCCAGTG...CCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTCAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATTCCTCAGTCAGGTGCTaGAAGCTCAGAGAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHSSVRC*KLREQL
Trigger: GAGCTGCTCTCTGAGCTTCAAGCACCTGACTGAGGA...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp TCCAAACAACCCCAGAAGGTTTTCACTTCACATGCGCTAAGCCACACAACACCTGGCCCTTGGGTGCTCTaGAGATATATCTGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: SKQPQKVFTSHALSHTTPGPWVL*RYICRL
Trigger: CAACCTGCAGATATATCTCAAGAGCACCCAAGGGCC...AGGTGTTGTGTGGCTTAGCGCATGTGAAGTGAAAACCTTCTGGGGTTGTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CAGCCGATCCCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTGTTTTCCACGGGAGCTaGTCTCTGCTGGACCATTTT +
Preference number: 5 (lower is better)
Translates to: QPIPLLWKRDTLWSILTPVFHGS*SLLDHF
Trigger: AAAATGGTCCAGCAGAGACAAGCTCCCGTGGAAAAC...AGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGGGATCGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAGAAGTCATAGCCTaGGTTCAGCCCAGAGCACCC +
Preference number: 5 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFPEVIA*VQPRAP
Trigger: GGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGG...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCCAATGGGGAGGTCTAGCCCCTaGGCCAGGCAAGGTGTGAAA +
Preference number: 5 (lower is better)
Translates to: PLGHELTFQTSVLNSFPMGRSSP*ARQGVK
Trigger: TTTCACACCTTGCCTGGCCAAGGGGCTAGACCTCCC...CATTGGGAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp GAGAGGCCTCTAGGGCATGAGCTTACATTCCAGACTTCAGTATTAAACTCATTCCTGCCTACCAAGTCCTaGGTGCAAAATGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ERPLGHELTFQTSVLNSFLPTKS*VQNGSW
Trigger: CCAGGAGCCATTTTGCACCAAGGACTTGGTAGGCAG...GAATGAGTTTAATACTGAAGTCTGGAATGTAAGCTCATGCCCTAGAGGCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGACACTGGATGTTGTTCTaGGCCTTCTTGCGGATGAGC +
Preference number: 5 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGHWMLF*AFLRMS
Trigger: GCTCATCCGCAAGAAGGCCAAGAACAACATCCAGTG...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATGACTTCGATGGGCCCTaGGGTGCTCTTGAGATATAT +
Preference number: 5 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHDFDGP*GALEIY
Trigger: ATATATCTCAAGAGCACCCAAGGGCCCATCGAAGTC...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp GAAATAATCCCTCGTCTCAAACTTCAGACATCAGTCAGTCAGCTCAGGAGCCATGTTTTCCACGGGAGCTaGTCTCTGCTGGACCATTTT +
Preference number: 5 (lower is better)
Translates to: EIIPRLKLQTSVSQLRSHVFHGS*SLLDHF
Trigger: AAAATGGTCCAGCAGAGACAAGCTCCCGTGGAAAAC...ATGGCTCCTGAGCTGACTGACTGATGTCTGAAGTTTGAGACGAGGGATTATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp ACTCAACCTGAAATAAATACAAAGGCATTATGTGCTTCTTGGTACGTCGAGGGTCCAGAAGTCATAGCCTaGGTTCAGCCCAGAGCACCC +
Preference number: 5 (lower is better)
Translates to: TQPEINTKALCASWYVEGPEVIA*VQPRAP
Trigger: GGGTGCTCTGGGCTGAACCAAGGCTATGACTTCTGG...ACCCTCGACGTACCAAGAAGCACATAATGCCTTTGTATTTATTTCAGGTTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGAGCCAGTTTTTCAAGCTaGACCACCTCCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGASFSS*TTSLFL
Trigger: GAGGAAGAGGGAGGTGGTCAAGCTTGAAAAACTGGC...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp CCATTACTGTGGAAAAGGGACACCCTCTGGTCTATTCTAACACCTTTAATGGGAGTCTGCTCCTTAAAGTaGCCAACAGCACGGATATCC +
Preference number: 5 (lower is better)
Translates to: PLLWKRDTLWSILTPLMGVCSLK*PTARIS
Trigger: GGATATCCGTGCTGTTGGCAACTTTAAGGAGCAGAC...TCCCATTAAAGGTGTTAGAATAGACCAGAGGGTGTCCCTTTTCCACAGTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS-3UTR CAA 90 bp ACTCAACCTGAAATAAATACAAAGGCATTATGTGCTTCTTGGTACGTCGAGGGTGGCCCTTGGGTGCTCTaGAGATATATCTGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: TQPEINTKALCASWYVEGGPWVL*RYICRL
Trigger: CAACCTGCAGATATATCTCAAGAGCACCCAAGGGCC...ACCCTCGACGTACCAAGAAGCACATAATGCCTTTGTATTTATTTCAGGTTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS GCA 72 bp GGGCTTGGCGCGCCCGCGGACACCTGCGGGTTCCGGTaGTGCCGCCTTTCACACGGCCCGCGGCATGGCGCG +
Preference number: 6 (lower is better)
Translates to: GLGAPADTCGFR*CRLSHGPRHGA
Trigger: CGCGCCATGCCGCGGGCCGTGTGAAAGGCGGCAGCACCGGAACCCGCAGGTGTCCGCGGGCGCGCCAAGCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS GCA 72 bp CTTGGCGCGCCCGCGGACACCTGCGGGTTCCGGTGCTaGCGCCTTTCACACGGCCCGCGGCATGGCGCGGAG +
Preference number: 6 (lower is better)
Translates to: LGAPADTCGFRC*RLSHGPRHGAE
Trigger: CTCCGCGCCATGCCGCGGGCCGTGTGAAAGGCGGCAGCACCGGAACCCGCAGGTGTCCGCGGGCGCGCCAAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS CCA 72 bp CTCGGGTCCGTGGGGAGTGGCGTCGAGGCAGGTGCCTaGCGCCGCTGCGGGAGGCGCCGTCTGCGGGTACAG +
Preference number: 6 (lower is better)
Translates to: LGSVGSGVEAGA*RRCGRRRLRVQ
Trigger: CTGTACCCGCAGACGGCGCCTCCCGCAGCGGCGCCAGGCACCTGCCTCGACGCCACTCCCCACGGACCCGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS CCA 72 bp GTTCCGGTGCTGCCGCCTTTCACACGGCCCGCGGCATaGCGCGGAGGCCGGGGGAAGCCGCCAATGGACGCC +
Preference number: 6 (lower is better)
Translates to: VPVLPPFTRPAA*RGGRGKPPMDA
Trigger: GGCGTCCATTGGCGGCTTCCCCCGGCCTCCGCGCCATGCCGCGGGCCGTGTGAAAGGCGGCAGCACCGGAAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS CCA 72 bp GCCGGCAGCCGGCCTGCCGGCAGGCATCGCACAACTTaGCCCTCGGGTCCGTGGGGAGTGGCGTCGAGGCAG +
Preference number: 6 (lower is better)
Translates to: AGSRPAGRHRTT*PSGPWGVASRQ
Trigger: CTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCAAGTTGTGCGATGCCTGCCGGCAGGCCGGCTGCCGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS CAA 72 bp GGCCGGCAGCCGGCCTGCCGGCAGGCATCGCACAACTaGGCCCTCGGGTCCGTGGGGAGTGGCGTCGAGGCA +
Preference number: 6 (lower is better)
Translates to: GRQPACRQASHN*ALGSVGSGVEA
Trigger: TGCCTCGACGCCACTCCCCACGGACCCGAGGGCCAAGTTGTGCGATGCCTGCCGGCAGGCCGGCTGCCGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS CCA 72 bp GGCATCGCACAACTTGGCCCTCGGGTCCGTGGGGAGTaGCGTCGAGGCAGGTGCCTGGCGCCGCTGCGGGAG +
Preference number: 6 (lower is better)
Translates to: GIAQLGPRVRGE*RRGRCLAPLRE
Trigger: CTCCCGCAGCGGCGCCAGGCACCTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCAAGTTGTGCGATGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS GCA 72 bp CCCTACCCAAAAGGGCTTGGCGCGCCCGCGGACACCTaGGGGTTCCGGTGCTGCCGCCTTTCACACGGCCCG +
Preference number: 6 (lower is better)
Translates to: PYPKGLGAPADT*GFRCCRLSHGP
Trigger: CGGGCCGTGTGAAAGGCGGCAGCACCGGAACCCGCAGGTGTCCGCGGGCGCGCCAAGCCCTTTTGGGTAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS CAA 90 bp CTTCCTTTTGGCCGGCAGCCGGCCTGCCGGCAGGCATCGCACAACTaGGCCCTCGGGTCCGTGGGGAGTGGCGTCGAGGCAGGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: LPFGRQPACRQASHN*ALGSVGSGVEAGAW
Trigger: CCAGGCACCTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCAAGTTGTGCGATGCCTGCCGGCAGGCCGGCTGCCGGCCAAAAGGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS GCA 72 bp CGCTTAGAGATCGCCGCTTGGAGATCGCCCGGCGGCTaGGGTGGTGGCACTGCCAGGGGCTGTCTCGTCCCG +
Preference number: 6 (lower is better)
Translates to: RLEIAAWRSPGG*GGGTARGCLVP
Trigger: CGGGACGAGACAGCCCCTGGCAGTGCCACCACCGCAGCCGCCGGGCGATCTCCAAGCGGCGATCTCTAAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS CCA 72 bp CGGCCGAGCAGAGAGCAGCGCTTAGAGATCGCCGCTTaGAGATCGCCCGGCGGCTGCGGTGGTGGCACTGCC +
Preference number: 6 (lower is better)
Translates to: RPSREQRLEIAA*RSPGGCGGGTA
Trigger: GGCAGTGCCACCACCGCAGCCGCCGGGCGATCTCCAAGCGGCGATCTCTAAGCGCTGCTCTCTGCTCGGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS CAA 72 bp GCGGCCGAGCAGAGAGCAGCGCTTAGAGATCGCCGCTaGGAGATCGCCCGGCGGCTGCGGTGGTGGCACTGC +
Preference number: 6 (lower is better)
Translates to: AAEQRAALRDRR*EIARRLRWWHC
Trigger: GCAGTGCCACCACCGCAGCCGCCGGGCGATCTCCAAGCGGCGATCTCTAAGCGCTGCTCTCTGCTCGGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS CAA 90 bp GGCCCTTGCAGCATAGCGAGTAAGGCGCCCCCTACCCAAAAGGGCTaGGCGCGCCCGCGGACACCTGCGGGTTCCGGTGCTGCCGCCTTT +
Preference number: 6 (lower is better)
Translates to: GPCSIASKAPPTQKG*ARPRTPAGSGAAAF
Trigger: AAAGGCGGCAGCACCGGAACCCGCAGGTGTCCGCGGGCGCGCCAAGCCCTTTTGGGTAGGGGGCGCCTTACTCGCTATGCTGCAAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS GCA 72 bp CACGCCAGGGTCGGGGACAGGAACTGGTCCTCAGTCTaGTGCAGGAGTGGGTGCGGCAGCTCCAGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: HARVGDRNWSSV*CRSGCGSSSRL
Trigger: CAGCCTGCTGGAGCTGCCGCACCCACTCCTGCAGCAGACTGAGGACCAGTTCCTGTCCCCGACCCTGGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS CAA 72 bp AGCATAGCGAGTAAGGCGCCCCCTACCCAAAAGGGCTaGGCGCGCCCGCGGACACCTGCGGGTTCCGGTGCT +
Preference number: 6 (lower is better)
Translates to: SIASKAPPTQKG*ARPRTPAGSGA
Trigger: AGCACCGGAACCCGCAGGTGTCCGCGGGCGCGCCAAGCCCTTTTGGGTAGGGGGCGCCTTACTCGCTATGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS GCA 72 bp GCCAGGGTCGGGGACAGGAACTGGTCCTCAGTCTGCTaGAGGAGTGGGTGCGGCAGCTCCAGCAGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: ARVGDRNWSSVC*RSGCGSSSRLS
Trigger: TGACAGCCTGCTGGAGCTGCCGCACCCACTCCTGCAGCAGACTGAGGACCAGTTCCTGTCCCCGACCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS CCA 72 bp CTCCAAGCCCCACAGGTAGTCGTCCTGGTCCAAGGATaGGGAGAAGCTGATCAGAGGGGAGCTGCACGCCAG +
Preference number: 6 (lower is better)
Translates to: LQAPQVVVLVQG*GEADQRGAARQ
Trigger: CTGGCGTGCAGCTCCCCTCTGATCAGCTTCTCCCCATCCTTGGACCAGGACGACTACCTGTGGGGCTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS TCA 72 bp ACAGGTCCCCAAGGTCGTAGGAGTCGAAGAGATCGCTaGTGCCCTCACCCGCCTCCAAGCCCCACAGGTAGT +
Preference number: 6 (lower is better)
Translates to: TGPQGRRSRRDR*CPHPPPSPTGS
Trigger: ACTACCTGTGGGGCTTGGAGGCGGGTGAGGGCATCAGCGATCTCTTCGACTCCTACGACCTTGGGGACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361729.3
ENST00000634683.2
CDS GCA 72 bp TTGTCCTCAGTCCTGTCGGGCACTTCCAGTCTCGTCTaGGGAGGGGCCTTGACGGCAATCACTGTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: LSSVLSGTSSLV*GGALTAITVCS
Trigger: GGAGCAGACAGTGATTGCCGTCAAGGCCCCTCCGCAGACGAGACTGGAAGTGCCCGACAGGACTGAGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361729.3
ENST00000487237.1
ENST00000634683.2
ENST00000635265.1
CDS CAA 90 bp TCCTCAGTCCTGTCGGGCACTTCCAGTCTCGTCTGCGGAGGGGCCTaGACGGCAATCACTGTCTGCTCCTTAAAGTTGCCAACAGCACGG +
Preference number: 6 (lower is better)
Translates to: SSVLSGTSSLVCGGA*TAITVCSLKLPTAR
Trigger: CCGTGCTGTTGGCAACTTTAAGGAGCAGACAGTGATTGCCGTCAAGGCCCCTCCGCAGACGAGACTGGAAGTGCCCGACAGGACTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361729.3
ENST00000487237.1
ENST00000634683.2
ENST00000635265.1
CDS CAA 90 bp CGGCTCCTGCACCTCCTCTGGGCACAGGTAGACTTCGATGGGCCCTaGGGTGCTCTTGAGATATATCTGCAGGTTGTCCTCAGTCCTGTC +
Preference number: 6 (lower is better)
Translates to: RLLHLLWAQVDFDGP*GALEIYLQVVLSPV
Trigger: GACAGGACTGAGGACAACCTGCAGATATATCTCAAGAGCACCCAAGGGCCCATCGAAGTCTACCTGTGCCCAGAGGAGGTGCAGGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361729.3
ENST00000487237.1
ENST00000634683.2
ENST00000635265.1
CDS CAA 72 bp CTGTCGGGCACTTCCAGTCTCGTCTGCGGAGGGGCCTaGACGGCAATCACTGTCTGCTCCTTAAAGTTGCCA +
Preference number: 6 (lower is better)
Translates to: LSGTSSLVCGGA*TAITVCSLKLP
Trigger: TGGCAACTTTAAGGAGCAGACAGTGATTGCCGTCAAGGCCCCTCCGCAGACGAGACTGGAAGTGCCCGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361729.3
ENST00000487237.1
ENST00000634683.2
ENST00000635265.1
CDS CAA 72 bp CACCTCCTCTGGGCACAGGTAGACTTCGATGGGCCCTaGGGTGCTCTTGAGATATATCTGCAGGTTGTCCTC +
Preference number: 6 (lower is better)
Translates to: HLLWAQVDFDGP*GALEIYLQVVL
Trigger: GAGGACAACCTGCAGATATATCTCAAGAGCACCCAAGGGCCCATCGAAGTCTACCTGTGCCCAGAGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361729.3
ENST00000487237.1
ENST00000634683.2
ENST00000635265.1