RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DZIP1L (Homo sapiens)

Ensembl gene IDs: ENSG00000158163

Ensembl transcript IDs: ENST00000327532.7, ENST00000467030.5, ENST00000469243.5, ENST00000473850.1, ENST00000486487.1, ENST00000488595.1, ENST00000490472.1, ENST00000492010.1

Found 381 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGGATACAAGGTCCAGCCAAGTGGCCATCCTCCCTTCCCACCCATaGGTAGGCCTGCCACATATCACAACCCTGGGAAACTCTCCAGGA +
Preference number: 1 (lower is better)
Translates to: GDTRSSQVAILPSHP*VGLPHITTLGNSPG
Trigger: TCCTGGAGAGTTTCCCAGGGTTGTGATATGTGGCAGGCCTACTCATGGGTGGGAAGGGAGGATGGCCACTTGGCTGGACCTTGTATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
3UTR GCA 90 bp CAGGGCCCCTCACAGGTCAGGAGGGATGAGATCATATCCATTCCCTaGACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTGTTTGTGAA +
Preference number: 1 (lower is better)
Translates to: QGPSQVRRDEIISIP*TASLQEDDLLVVCE
Trigger: TTCACAAACAACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCTCCTGACCTGTGAGGGGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
3UTR CCA 90 bp TCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTaGTTGTTTGTGAAGACAAGAGGCCCAGCAGCCTCTTCTGTTGAA +
Preference number: 1 (lower is better)
Translates to: SYPFPALLLSKRMIS*LFVKTRGPAASSVE
Trigger: TTCAACAGAAGAGGCTGCTGGGCCTCTTGTCTTCACAAACAACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
3UTR CCA 90 bp AACCTGATTTTGGAAATAATATCAAAAATTACACGTGTGGTCCTTTaGGGATACAAGGTCCAGCCAAGTGGCCATCCTCCCTTCCCACCC +
Preference number: 1 (lower is better)
Translates to: NLILEIISKITRVVL*GYKVQPSGHPPFPP
Trigger: GGGTGGGAAGGGAGGATGGCCACTTGGCTGGACCTTGTATCCCCAAAGGACCACACGTGTAATTTTTGATATTATTTCCAAAATCAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327532.7
3UTR-3UTR TCA 90 bp ACCCCGAAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCGACTCTGCCACCCGTaGGACAGCAAGAGCAACCCC +
Preference number: 2 (lower is better)
Translates to: TPKQRGVEQPWVHLYVDFRLCHP*DSKSNP
Trigger: GGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCG...AAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTTCGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
3UTR-3UTR CCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAGACTCTTTTCAGTCTTaGGGGGATGTGGAGGTAGAG +
Preference number: 2 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPDSFQS*GDVEVE
Trigger: CTCTACCTCCACATCCCCCCAAGACTGAAAAGAGTC...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327532.7
3UTR CAA 90 bp TATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTaGTTTGTGAAGACAAGAGGCCCAGCAGCCTCTTCTGTTGAAGTG +
Preference number: 2 (lower is better)
Translates to: YPFPALLLSKRMISW*FVKTRGPAASSVEV
Trigger: CACTTCAACAGAAGAGGCTGCTGGGCCTCTTGTCTTCACAAACAACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
3UTR-3UTR GCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATTCTCCACAGTGTTCCTaGAGTTTTATAAAAGGCTTG +
Preference number: 2 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHSPQCS*SFIKGL
Trigger: CAAGCCTTTTATAAAACTGCAGGAACACTGTGGAGA...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327532.7
3UTR-3UTR CCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATAAGAGGATGATCTCTTaGTTGTTTGTGAAGACAAGA +
Preference number: 2 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHKRMIS*LFVKTR
Trigger: TCTTGTCTTCACAAACAACCAAGAGATCATCCTCTT...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
3UTR-3UTR CAA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGCAAGAGGATGATCTCTaGGTTGTTTGTGAAGACAAG +
Preference number: 3 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQQEDDL*VVCEDK
Trigger: CTTGTCTTCACAAACAACCAAGAGATCATCCTCTTG...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
3UTR CCA 72 bp TTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTaGTTGTTTGTGAAGACAAGAGGCCCAGCAGCCTCT +
Preference number: 3 (lower is better)
Translates to: FPALLLSKRMIS*LFVKTRGPAAS
Trigger: AGAGGCTGCTGGGCCTCTTGTCTTCACAAACAACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
3UTR-3UTR CAA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATAGGATGATCTCTTGGTaGTTTGTGAAGACAAGAGGC +
Preference number: 3 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHRMISW*FVKTRG
Trigger: GCCTCTTGTCTTCACAAACAACCAAGAGATCATCCT...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGCCGGGTCCACAGGCTaGCCACAGCGGCTGCACACC +
Preference number: 4 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSAGSTG*PQRLHT
Trigger: GGTGTGCAGCCGCTGTGGGCAGCCTGTGGACCCGGC...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAATGCAGTCCGGGGCGTaGAGCGGGGGCGGACACCTG +
Preference number: 4 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSMQSGA*SGGGHL
Trigger: CAGGTGTCCGCCCCCGCTCCACGCCCCGGACTGCAT...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCACCAGGCGCAGCACCTTaGGCAGTGCCGGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSPGAAP*AVPGPQ
Trigger: CTGTGGACCCGGCACTGCTCAAGGTGCTGCGCCTGG...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGGTGCTGGAGGGTCCATaGAGTCCGGGGCGTGGAGCG +
Preference number: 4 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQVLEGP*SPGRGA
Trigger: CGCTCCACGCCCCGGACTGCATGGACCCTCCAGCAC...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCACAAAGAGGGGGCCACTaGGGCCCTCAGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSQRGGH*GPQQWQ
Trigger: CTGCCACTGCTGAGGGCCTCAGTGGCCCCCTCTTTG...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGGCTGGGCCTCTCTGGTaGCCAGTGTGCTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQAGPLW*PVCSAG
Trigger: GCCAGCAGAGCACACTGGTCACCAGAGAGGCCCAGC...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGTCTGCTTCCTGGAGCTaGCGCTGCCTCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQSASWS*RCLSAS
Trigger: GGAGGCGGAGAGGCAGCGGCAGCTCCAGGAAGCAGA...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGGCTGGTCTGCAGCCGTaGCTCCAGCTGGGCAACACT +
Preference number: 4 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQAGLQP*LQLGNT
Trigger: AGTGTTGCCCAGCTGGAGGCACGGCTGCAGACCAGC...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGAGCCGTGCCTCCAGCTaGGCAACACTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQSRASS*ATLALR
Trigger: CCTGAGTGCCAGTGTTGCCCAGCTGGAGGCACGGCT...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGACGAGTTGGTGGGGGTaGCTCTGCCGGTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQTSWWG*LCRCGW
Trigger: CCATCCACACCGGCAGAGCCACCCCCACCAACTCGT...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGATGGCTCTGACGAGTTaGTGGGGGTGGCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQMALTS*WGWLCR
Trigger: CCGGCAGAGCCACCCCCACCAACTCGTCAGAGCCAT...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGAGGAAGGAGGGGTGCTaGAGGGTCCATGCAGTCCGG +
Preference number: 4 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQRKEGC*RVHAVR
Trigger: CCGGACTGCATGGACCCTCCAGCACCCCTCCTTCCT...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGCTTCCTTCCTGGTGTaGCAGCCCTCTGTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSASFLV*QPSVAQ
Trigger: CTGGGCCACAGAGGGCTGCCACACCAGGAAGGAAGC...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCCGTCCCAGCTCCTGCTaGCCACGCTGCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: VDFLPTLPPVRQQEQPLLRPSSC*PRCCWP
Trigger: GGGCCAGCAGCAGCGTGGTCAGCAGGAGCTGGGACG...GAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAACCTTCTGCCACGCCTaGATGCCTGCGCTGGATGTG +
Preference number: 4 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSTFCHA*MPALDV
Trigger: CACATCCAGCGCAGGCATGCAGGCGTGGCAGAAGGT...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGAACTTCCGGGCCTTCTaGTCCCGCTGGACTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQNFRAF*SRWTLS
Trigger: GCTGAGAGTCCAGCGGGAGCAGAAGGCCCGGAAGTT...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGGCGAGGCTGAAACTTaGAGGTGGGGAACGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSGEAET*RWGTCR
Trigger: CCTACACGTTCCCCACCTTCAAGTTTCAGCCTCGCC...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCATGCTCTGCTGGCTTTTaGCTGAAGGCTGCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSCSAGF*LKAARL
Trigger: CAGACGGGCAGCCTTCAGTCAAAAGCCAGCAGAGCA...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCACTCCCTTCCCACCCATaGGTAGGCCTGCCACATATC +
Preference number: 4 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSLPSHP*VGLPHI
Trigger: GATATGTGGCAGGCCTACTCATGGGTGGGAAGGGAG...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAAGTCCGGGCGCTCTCTaGGGCGGAGGCAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPSPGAL*GGGRAC
Trigger: GCAGGCTCTGCCTCCGCCGCAGAGAGCGCCCGGACT...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp CGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCCACGCCTGCATGCCTaGGCTGGATGTGGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: RGFSSDSATRETARATPPPRLHA*AGCGPG
Trigger: TCCGGGGCCACATCCAGCGCAGGCATGCAGGCGTGG...AGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCACTGTTTTCCACCTTCTaGCACGCCTGCATGCCTGCG +
Preference number: 4 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSLFSTF*HACMPA
Trigger: CGCAGGCATGCAGGCGTGGCAGAAGGTGGAAAACAG...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCACTTTTGACTGAAGGCTaGCCGTCTGGCTGGGACACC +
Preference number: 4 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSLLTEG*PSGWDT
Trigger: GGTGTCCCAGCCAGACGGGCAGCCTTCAGTCAAAAG...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp TTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCTTCCTCGCTGCTGGCCCAGGCTaGTCTGCAGCCGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FLPTLPPVRQQEQPLLFLAAGPG*SAAVPP
Trigger: TGGAGGCACGGCTGCAGACCAGCCTGGGCCAGCAGC...GAGGAAGAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAGCGGGGGCGGACACCTaGGTCAGGCTGGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPAGADT*VRLEPW
Trigger: CCATGGCTCCAGCCTGACCCAGGTGTCCGCCCCCGC...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp CGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCAAAGAGGGGGCCACTaGGGCCCTCAGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RGFSSDSATRETARATPPQRGGH*GPQQWQ
Trigger: CTGCCACTGCTGAGGGCCTCAGTGGCCCCCTCTTTG...AGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGCTGGGACTGGGCAGCTaGCTTCTTCTGATCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQLGLGS*LLLILR
Trigger: TCTCAGGATCAGAAGAAGGCAGCTGCCCAGTCCCAG...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGTTCTGCCCCAGCCTCTaGCTGCACCCTAACTCAGTA +
Preference number: 4 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQFCPSL*LHPNSV
Trigger: TACTGAGTTAGGGTGCAGGCAGAGGCTGGGGCAGAA...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGTATTCTCCTGCAGAGTaGCCACATCCAGTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQYSPAE*PHPVPG
Trigger: CCCGGGAACTGGATGTGGCCACTCTGCAGGAGAATA...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGCACTCAGGCAATCCTaGCAGTGCAGCAGGTACTCA +
Preference number: 4 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSALRQS*QCSRYS
Trigger: TGAGTACCTGCTGCACTGCCAGGATTGCCTGAGTGC...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGCCAGGCGCAGCACCTTaGGCAGTGCCGGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: EQPWVHLYVDFLPTLPPVPGAAP*AVPGPQ
Trigger: CTGTGGACCCGGCACTGCTCAAGGTGCTGCGCCTGG...CACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR TCA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGGCTTCTCCAGGTTTTTaGCCATCGACTGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQASPGF*PSTAPV
Trigger: CACTGGTGCAGTCGATGGTCAAAAACCTGGAGAAGC...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp CGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCGACTCTGCCACCCGTaGGACAGCAAGAGCAACCCC +
Preference number: 4 (lower is better)
Translates to: RGFSSDSATRETARATPPRLCHP*DSKSNP
Trigger: GGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCG...AGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAGCTGCCCACAGCGGCTaGACACCTCCCGGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPAAHSG*TPPGPS
Trigger: ACTTGGACCGGGAGGTGTGCAGCCGCTGTGGGCAGC...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp CTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCGCCGGGTCCACAGGCTaGCCACAGCGGCTGCACACC +
Preference number: 4 (lower is better)
Translates to: LIRGFSSDSATRETARATAGSTG*PQRLHT
Trigger: GGTGTGCAGCCGCTGTGGGCAGCCTGTGGACCCGGC...GGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp CGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTGCTGGTCTGCAGCCGTaGCTCCAGCTGGGCAACACT +
Preference number: 4 (lower is better)
Translates to: RGFSSDSATRETARATPPAGLQP*LQLGNT
Trigger: AGTGTTGCCCAGCTGGAGGCACGGCTGCAGACCAGC...AGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp CGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCTTCAGCCTGAAGGCTaGCCGTCTGGCTGGGACACC +
Preference number: 4 (lower is better)
Translates to: RGFSSDSATRETARATPPLQPEG*PSGWDT
Trigger: GGTGTCCCAGCCAGACGGGCAGCCTTCAGGCTGAAG...AGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATGCTGAGAGAAGGCCGTaGGGTCTCCTGGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHAERRP*GLLEPG
Trigger: CCCCGGCTCCAGGAGACCCCACGGCCTTCTCTCAGC...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGTGTGTCCACAGCCTTTaGCACCTTGTGGATCCCTTC +
Preference number: 4 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQCVHSL*HLVDPF
Trigger: GAAGGGATCCACAAGGTGCCAAAGGCTGTGGACACA...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAGGCTGCCCGTCTGGCTaGGACACCACAGCGCCATTC +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPGCPSG*DTTAPF
Trigger: GAATGGCGCTGTGGTGTCCCAGCCAGACGGGCAGCC...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp TTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCTTCCTGGCTGCCCGTCTGGCTaGGACACCACAGCGCCATTC +
Preference number: 4 (lower is better)
Translates to: FSSDSATRETARATPPLPGCPSG*DTTAPF
Trigger: GAATGGCGCTGTGGTGTCCCAGCCAGACGGGCAGCC...AGGAAGAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATCCCTGGCCAGGGGGCTaGGCATTCTCCTCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHPWPGG*AFSSEV
Trigger: GACCTCGGAGGAGAATGCCCAGCCCCCTGGCCAGGG...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAAGCGAGACAAGGGCTTaGGTTTCTCTCTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSSETRA*VSLSGP
Trigger: TGGACCAGAGAGAGAAACCCAAGCCCTTGTCTCGCT...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAGTGGCAGCTGGGGACTaGATGGGCAGAGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPVAAGD*MGRGSP
Trigger: AGGGCTTCCTCTGCCCATGCAGTCCCCAGCTGCCAC...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAAGGCAATCCTGGCAGTaGAGCAGGTACTCAATGATG +
Preference number: 4 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSRQSWQ*SRYSMM
Trigger: CATCATTGAGTACCTGCTGCACTGCCAGGATTGCCT...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCACCTTCTGCCACGCCTaGATGCCTGCGCTGGATGTG +
Preference number: 4 (lower is better)
Translates to: VDFLPTLPPVRQQEQPLLTFCHA*MPALDV
Trigger: CACATCCAGCGCAGGCATGCAGGCGTGGCAGAAGGT...GAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATTGGTGGGGGTGGCTCTaGCGGTGTGGATGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHWWGWL*RCGWQG
Trigger: GCCTTGCCATCCACACCGGCAGAGCCACCCCCACCA...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGGCTGGAGCTTCTAGCTaGTTCTCCAGGTTTTTGACC +
Preference number: 4 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQAGASS*FSRFLT
Trigger: GGTCAAAAACCTGGAGAAGCAGCTAGAAGCTCCAGC...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAGAAGACGTCTCGAGGTaGCGGCTCCCATACTCGCCC +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPEDVSR*RLPYSP
Trigger: GGGCGAGTATGGGAGCCGCCACCTCGAGACGTCTTC...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCACTCTGCCGGTGTGGATaGCAAGGCCACCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPLCRCG*QGHLQG
Trigger: ACCCTGCAGGTGGCCTTGCCATCCACACCGGCAGAG...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGACTCTTTTCAGTCTTaGGGGGATGTGGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSDSFQS*GDVEVE
Trigger: CTCTACCTCCACATCCCCCCAAGACTGAAAAGAGTC...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCGGCGAGGCTGAAACTTaGAGGTGGGGAACGTGTAGG +
Preference number: 4 (lower is better)
Translates to: VDFLPTLPPVRQQEQPLLGEAET*RWGTCR
Trigger: CCTACACGTTCCCCACCTTCAAGTTTCAGCCTCGCC...GAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR TCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCCGTCCCAGCTCCTGCTaGCCACGCTGCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLRPSSC*PRCCWP
Trigger: GGGCCAGCAGCAGCGTGGTCAGCAGGAGCTGGGACG...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp ACCCCGAAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCCTCCCGCACACCCTTaGGCTCGTCAGCCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: TPKQRGVEQPWVHLYVDFPPAHP*ARQPGV
Trigger: GACGCCAGGCTGACGAGCTCAAGGGTGTGCGGGAGG...AAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTTCGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR TCA 90 bp GGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCAGCTGCTGCAGGGTGCTaGTCATCTTGCGACGCCGGC +
Preference number: 4 (lower is better)
Translates to: GVEQPWVHLYVDFLPTLPAAAGC*SSCDAG
Trigger: GCCGGCGTCGCAAGATGATCAGCACCCTGCAGCAGC...TGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR TCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATTTCTCTCTCAGGGCCTaGAGCTCCCGTGCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHFSLRA*SSRACR
Trigger: TCGGCAGGCACGGGAGCTTCAGGCCCTGAGAGAGAA...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp AACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCGGGCACGGAGGGTGCTaGTCTGGCACTGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: NVGLNSHGSTYTWIFFRLGHGGC*SGTGTG
Trigger: CCCAGTCCCAGTGCCAGATCAGCACCCTCCGTGCCC...GAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTGGCGGAGGCAGAGCCTaGCCGGCCCACTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: EIISIPCTASLQEDDLLVGGGRA*PAHSSA
Trigger: GGCACTGGAGTGGGCCGGGCAGGCTCTGCCTCCGCC...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCCCGCCGTTCCCGGGATaGTTCCCCAGCCCCACGCAG +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLPPFPG*FPSPTQ
Trigger: CTGCGTGGGGCTGGGGAAGCATCCCGGGAACGGCGG...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATAGATGGTTCCCGGAATaGTCACCGCCCGCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHRWFPE*SPPAVP
Trigger: GGGAACGGCGGGCGGTGAGCATTCCGGGAACCATCT...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp ATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTGTGGCAGCTGGGGACTaGATGGGCAGAGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: IRGFSSDSATRETARATPVAAGD*MGRGSP
Trigger: AGGGCTTCCTCTGCCCATGCAGTCCCCAGCTGCCAC...AGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp GGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCAGCTGCCCACAGCGGCTaGACACCTCCCGGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: GVEQPWVHLYVDFLPTLPAAHSG*TPPGPS
Trigger: ACTTGGACCGGGAGGTGTGCAGCCGCTGTGGGCAGC...TGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp TTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGCAGCACCTTGAGCAGTaGCGGGTCCACAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LNSHGSTYTWIFFRLCHPQHLEQ*RVHRLP
Trigger: GGGCAGCCTGTGGACCCGGCACTGCTCAAGGTGCTG...CGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp TTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCTTCCTCGCTGCCAGCACCTTGTaGTGTTCATCCTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: FLPTLPPVRQQEQPLLFLAASTL*CSSWES
Trigger: GGACTCCCAGGATGAACAGCACAAGGTGCTGGCAGC...GAGGAAGAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATCCTGCATGCCTGCGCTaGATGTGGCCCCGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHPACLR*MWPRRK
Trigger: CTTTCTCCGGGGCCACATCCAGCGCAGGCATGCAGG...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp TTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCTTCCTCGCTTCCAGCTCCCCTTaGGTCCACTTTAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: FLPTLPPVRQQEQPLLFLASSSP*VHFSLA
Trigger: GGCCAAGCTAAAGTGGACCCAAGGGGAGCTGGAAGC...GAGGAAGAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp ATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCGGAGGGTGCTGATCTaGCACTGGGACTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: IRGFSSDSATRETARATPRRVLI*HWDWAA
Trigger: AGCTGCCCAGTCCCAGTGCCAGATCAGCACCCTCCG...AGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAGCTTGTTCCTGCAGCTaGGCACGGAGGGTGCTGATC +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPACSCS*ARRVLI
Trigger: GATCAGCACCCTCCGTGCCCAGCTGCAGGAACAAGC...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAGCCTTCTGCTCCCGCTaGACTCTCAGCAGGGATTCC +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPAFCSR*TLSRDS
Trigger: GGAATCCCTGCTGAGAGTCCAGCGGGAGCAGAAGGC...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATAGTGTTCCTGAGCCCTaGCCAGGGGGCTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHSVPEP*PGGWAF
Trigger: GAATGCCCAGCCCCCTGGCCAGGGCTCAGGAACACT...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATACCAGGCAGGGACCCTaGGTTGGCCAGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHTRQGP*VGQSSV
Trigger: CACAGAGCTCTGGCCAACCCAGGGTCCCTGCCTGGT...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCCTCCTCATCTCGCAGTaGTCCCAGCTTGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: VDFLPTLPPVRQQEQPLLLLISQ*SQLGLH
Trigger: ATGGAGTCCAAGCTGGGATCACTGCGAGATGAGGAG...GAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR TCA 90 bp GTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCTTCTCTCTCAGGGCCTaGAGCTCCCGTGCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: VEQPWVHLYVDFLPTLPPFSLRA*SSRACR
Trigger: TCGGCAGGCACGGGAGCTTCAGGCCCTGAGAGAGAA...GGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR TCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATCTGCTGGCTTTTGACTaGAGGCTGCCCGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHLLAFD*RLPVWL
Trigger: CAGCCAGACGGGCAGCCTTCAGTCAAAAGCCAGCAG...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCCTGCACCAGTGTTCCTaGGCCCTGGCCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLLHQCS*ALARGL
Trigger: CAGCCCCCTGGCCAGGGCTCAGGAACACTGGTGCAG...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCCCACGCCTGCATGCCTaGGCTGGATGTGGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLPRLHA*AGCGPG
Trigger: TCCGGGGCCACATCCAGCGCAGGCATGCAGGCGTGG...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp ACCCCGAAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTTCTGCCACGCCTGCATaGCTGCGCTGGATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TPKQRGVEQPWVHLYVDFSATPA*LRWMWP
Trigger: GGGCCACATCCAGCGCAGGCATGCAGGCGTGGCAGA...AAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTTCGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp AACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCGGCCTGAAGCTCCCGTaGCTGCCGAAGCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: NVGLNSHGSTYTWIFFRLGLKLP*LPKPLL
Trigger: GAGGAGTGGCTTCGGCAGGCACGGGAGCTTCAGGCC...GAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGATCATATCCATTCCCTaGACTGCTTCTCTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQIISIP*TASLQE
Trigger: CTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGAT...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCTATTCTCCTGCAGAGTaGCCACATCCAGTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: VDFLPTLPPVRQQEQPLLYSPAE*PHPVPG
Trigger: CCCGGGAACTGGATGTGGCCACTCTGCAGGAGAATA...GAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp ATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCAGCTGGGCAACACTaGCACTCAGGCAATCCTGGC +
Preference number: 4 (lower is better)
Translates to: IRGFSSDSATRETARATPPAGQH*HSGNPG
Trigger: GCCAGGATTGCCTGAGTGCCAGTGTTGCCCAGCTGG...AGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp TTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGAGCCGTGCCTCCAGCTaGGCAACACTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: LNSHGSTYTWIFFRLCHPSRASS*ATLALR
Trigger: CCTGAGTGCCAGTGTTGCCCAGCTGGAGGCACGGCT...CGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp GTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCTGCCTGCGCTGGATGTaGCCCCGGAGAAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VEQPWVHLYVDFLPTLPPCLRWM*PRRKVA
Trigger: TGCCACCTTTCTCCGGGGCCACATCCAGCGCAGGCA...GGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAGCTTCCAGCTCCCCTTaGGTCCACTTTAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPASSSP*VHFSLA
Trigger: GGCCAAGCTAAAGTGGACCCAAGGGGAGCTGGAAGC...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp CGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTGCAGTGATCCCAGCTTaGACTCCATCACACTGTGGG +
Preference number: 4 (lower is better)
Translates to: RGFSSDSATRETARATPPAVIPA*TPSHCG
Trigger: CCCACAGTGTGATGGAGTCCAAGCTGGGATCACTGC...AGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAGAGGCCTGGAGCCTCTaGTTCTCCTCCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPEAWSL*FSSCSS
Trigger: AGAGCTACAGGAGGAGAACCAGAGGCTCCAGGCCTC...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp ATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTGTGCTGATCTGGCACTaGGACTGGGCAGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: IRGFSSDSATRETARATPVLIWH*DWAAAF
Trigger: GAAGGCAGCTGCCCAGTCCCAGTGCCAGATCAGCAC...AGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp GAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGGCTTGTTCCTGCAGCTaGGCACGGAGGGTGCTGATC +
Preference number: 4 (lower is better)
Translates to: EQPWVHLYVDFLPTLPPVACSCS*ARRVLI
Trigger: GATCAGCACCCTCCGTGCCCAGCTGCAGGAACAAGC...CACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAGTCCTGGTCTTTGGCTaGGCCTCTCTGGTGACCAGT +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPVLVFG*ASLVTS
Trigger: ACTGGTCACCAGAGAGGCCCAGCCAAAGACCAGGAC...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATCAAGGTCCAGCCAAGTaGCCATCCTCCCTTCCCACC +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHQGPAK*PSSLPT
Trigger: GGTGGGAAGGGAGGATGGCCACTTGGCTGGACCTTG...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp TTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCTTCCTCCTATCATGGCGAGGCTaGAACTTGAAGGTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: FLPTLPPVRQQEQPLLFLLSWRG*NLKVGN
Trigger: GTTCCCCACCTTCAAGTTTCAGCCTCGCCATGATAG...GAGGAAGAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR TCA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTCCTCCCGCACACCCTTaGGCTCGTCAGCCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: EIISIPCTASLQEDDLLVPPAHP*ARQPGV
Trigger: GACGCCAGGCTGACGAGCTCAAGGGTGTGCGGGAGG...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTGGGCACGGAGGGTGCTaGTCTGGCACTGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: EIISIPCTASLQEDDLLVGHGGC*SGTGTG
Trigger: CCCAGTCCCAGTGCCAGATCAGCACCCTCCGTGCCC...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp CGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCCTCCAGGATTGGTCTaGAGTGCTTCAGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: RGFSSDSATRETARATPPPPGLV*SASAKW
Trigger: CCACTTTGCTGAAGCACTTCAGACCAATCCTGGAGG...AGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR TCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTGGCTGCCATGGCTCTaGCGAGTTGGTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLWLPWL*RVGGGG
Trigger: GCCACCCCCACCAACTCGTCAGAGCCATGGCAGCCA...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATAGTCCTCTTCAGAACTaGACGGGGGCGTGCTCATCC +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHSPLQN*TGACSS
Trigger: GGATGAGCACGCCCCCGTTCAGTTCTGAAGAGGACT...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp ACCCCGAAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTTCCTCCTCTTCAGCCTaGAGGCTGCCCGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TPKQRGVEQPWVHLYVDFSSSSA*RLPVWL
Trigger: CAGCCAGACGGGCAGCCTTCAGGCTGAAGAGGAGGA...AAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTTCGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGCCAGTGCCGCCAACCTaGGGGACCGCGGACAGAGAG +
Preference number: 4 (lower is better)
Translates to: DEIISIPCTASLQEDDLLPVPPT*GTADRE
Trigger: CTCTCTGTCCGCGGTCCCGCAGGTTGGCGGCACTGG...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTCCCGCCTCCAGACTTaGTCCACCGCCCCAGACAGC +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLSRLQT*STAPDS
Trigger: GCTGTCTGGGGCGGTGGAGCAAGTCTGGAGGCGGGA...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp TTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCTTCCTCTGCGTCTCCAGTCCATaGTATCATGGCGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: FLPTLPPVRQQEQPLLFLCVSSP*YHGEAE
Trigger: TTCAGCCTCGCCATGATAGCATGGACTGGAGACGCA...GAGGAAGAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCCAGCACCTTGAGCAGTaGCGGGTCCACAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLQHLEQ*RVHRLP
Trigger: GGGCAGCCTGTGGACCCGGCACTGCTCAAGGTGCTG...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp AAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGTCTGCTTCCTGGAGCTaGCGCTGCCTCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: KQRGVEQPWVHLYVDFLPSASWS*RCLSAS
Trigger: GGAGGCGGAGAGGCAGCGGCAGCTCCAGGAAGCAGA...CGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATGCTGCCAGCACCTTGTaGTGTTCATCCTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHAASTL*CSSWES
Trigger: GGACTCCCAGGATGAACAGCACAAGGTGCTGGCAGC...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAGTTACGCCTCAGAGCTaGCAGCACCTTGTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPVTPQS*QHLVLF
Trigger: GAACAGCACAAGGTGCTGGCAGCTCTGAGGCGTAAC...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCAAACTTCCGGGCCTTCTaGTCCCGCTGGACTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GVEQPWVHLYVDFLPTLPNFRAF*SRWTLS
Trigger: GCTGAGAGTCCAGCGGGAGCAGAAGGCCCGGAAGTT...TGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATGTAGAGACACACGCTaGACACGGTCTCCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPCRDTR*TRSPSE
Trigger: CTCAGAGGGAGACCGTGTGCAGCGTGTGTCTCTACA...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTGCTGCTGGCCCAGGCTaGTCTGCAGCCGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: EIISIPCTASLQEDDLLVAAGPG*SAAVPP
Trigger: TGGAGGCACGGCTGCAGACCAGCCTGGGCCAGCAGC...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp AACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCCCTGCATGCCTGCGCTaGATGTGGCCCCGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: NVGLNSHGSTYTWIFFRLPACLR*MWPRRK
Trigger: CTTTCTCCGGGGCCACATCCAGCGCAGGCATGCAGG...GAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp GGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCAATGAGCTCTGCTTCCTaGAGCTGCCGCTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GVEQPWVHLYVDFLPTLPMSSAS*SCRCLS
Trigger: GGAGAGGCAGCGGCAGCTCCAGGAAGCAGAGCTCAT...TGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCATTTCCCCATAAAGTTTaGTCCACTCTTGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSFPHKV*STLALS
Trigger: GGAAAGAGCAAGAGTGGACCAAACTTTATGGGGAAA...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp ATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTGACTCCATCACACTGTaGGACTGCAGTGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: IRGFSSDSATRETARATPDSITL*DCSARS
Trigger: ACTGCGGGCACTGCAGTCCCACAGTGTGATGGAGTC...AGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR TCA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTGCTGCTGCAGGGTGCTaGTCATCTTGCGACGCCGGC +
Preference number: 4 (lower is better)
Translates to: EIISIPCTASLQEDDLLVAAAGC*SSCDAG
Trigger: GCCGGCGTCGCAAGATGATCAGCACCCTGCAGCAGC...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATCTCCTCATCTCGCAGTaGTCCCAGCTTGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHLLISQ*SQLGLH
Trigger: ATGGAGTCCAAGCTGGGATCACTGCGAGATGAGGAG...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCACCTCCAGGATTGGTCTaGAGTGCTTCAGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPPPGLV*SASAKW
Trigger: CCACTTTGCTGAAGCACTTCAGACCAATCCTGGAGG...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCATCAGCAGGGCTTGTCTaGACCCGACTCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: GVEQPWVHLYVDFLPTLPSAGLV*TRLSST
Trigger: TGTGGAGCTGAGTCGGGTTCAGACAAGCCCTGCTGA...TGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp GAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGTACTCAATGATGAGCTaGGCCAGGCGCAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: EQPWVHLYVDFLPTLPPVYSMMS*ARRSTL
Trigger: CAAGGTGCTGCGCCTGGCGCAGCTCATCATTGAGTA...CACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp GTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCTGCATTAGCAGCTGCTaGAGGGTGCTGATCATCTTG +
Preference number: 4 (lower is better)
Translates to: VDFLPTLPPVRQQEQPLLCISSC*RVLIIL
Trigger: CAAGATGATCAGCACCCTGCAGCAGCTGCTAATGCA...GAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGTCTGCCACGCCTGCATaGCTGCGCTGGATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: DEIISIPCTASLQEDDLLSATPA*LRWMWP
Trigger: GGGCCACATCCAGCGCAGGCATGCAGGCGTGGCAGA...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCCTGTTTTCCACCTTCTaGCACGCCTGCATGCCTGCG +
Preference number: 4 (lower is better)
Translates to: VEQPWVHLYVDFLPTLPPLFSTF*HACMPA
Trigger: CGCAGGCATGCAGGCGTGGCAGAAGGTGGAAAACAG...GGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTGGCCTGAAGCTCCCGTaGCTGCCGAAGCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: EIISIPCTASLQEDDLLVGLKLP*LPKPLL
Trigger: GAGGAGTGGCTTCGGCAGGCACGGGAGCTTCAGGCC...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAGTGACCAGTGTGCTCTaGTGGCTTTTGACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPVTSVL*WLLTEG
Trigger: GCCTTCAGTCAAAAGCCAGCAGAGCACACTGGTCAC...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTGCCTGCGCTGGATGTaGCCCCGGAGAAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLCLRWM*PRRKVA
Trigger: TGCCACCTTTCTCCGGGGCCACATCCAGCGCAGGCA...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCAGAGGCCTGGAGCCTCTaGTTCTCCTCCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: GVEQPWVHLYVDFLPTLPEAWSL*FSSCSS
Trigger: AGAGCTACAGGAGGAGAACCAGAGGCTCCAGGCCTC...TGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATGCCTTTGGCACCTTGTaGATCCCTTCCACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHAFGTL*IPSTFL
Trigger: CAGGAAGGTGGAAGGGATCCACAAGGTGCCAAAGGC...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCGTGGCTCTGCCGGTGTaGATGGCAAGGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLVALPV*MARPPA
Trigger: TGCAGGTGGCCTTGCCATCCACACCGGCAGAGCCAC...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCGCTCTGACGAGTTGGTaGGGGTGGCTCTGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLALTSW*GWLCRC
Trigger: ACACCGGCAGAGCCACCCCCACCAACTCGTCAGAGC...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCAGTCCCAGTCATCCTTaGGCCGGGGCACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLSPSHP*AGAPSW
Trigger: CCAGGATGGTGCCCCGGCCCAAGGATGACTGGGACT...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATTGTGGCAGCCCTCTGTaGCCCAGCATTGGGCATAAA +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHCGSPL*PSIGHK
Trigger: TTTATGCCCAATGCTGGGCCACAGAGGGCTGCCACA...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATTTCCCTCTGATGAATaGGCTCTGCTTCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPFPSDE*ALLPGA
Trigger: AGCTCCAGGAAGCAGAGCTCATTCATCAGAGGGAAA...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATCATCTTCAGAAAGCTaGGGCTTCCTTCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPSSSES*GFLPGV
Trigger: CACACCAGGAAGGAAGCCTCAGCTTTCTGAAGATGA...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATTGTGGTAGCTGTGGGTaGCTGTCTGCATTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHCGSCG*LSALAA
Trigger: AGCTGCTAATGCAGACAGGCACCCACAGCTACCACA...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGATCACACTGTGGGACTaGAGTGCCCGCAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: EQPWVHLYVDFLPTLPPVITLWD*SARSFS
Trigger: AGAGAAACTGCGGGCACTGCAGTCCCACAGTGTGAT...CACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp TTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGCTGGGACTGGGCAGCTaGCTTCTTCTGATCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LNSHGSTYTWIFFRLCHPLGLGS*LLLILR
Trigger: TCTCAGGATCAGAAGAAGGCAGCTGCCCAGTCCCAG...CGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp CTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCGTTACGCCTCAGAGCTaGCAGCACCTTGTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LIRGFSSDSATRETARATVTPQS*QHLVLF
Trigger: GAACAGCACAAGGTGCTGGCAGCTCTGAGGCGTAAC...GGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCGGCTGGAGCCATGGCTaGCATGGCTCTGACGAGTTG +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLGWSHG*HGSDEL
Trigger: CAACTCGTCAGAGCCATGGCAGCCATGGCTCCAGCC...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGCTCAGCTCCACAGCTTaGGTCTGTCTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: EQPWVHLYVDFLPTLPPVLSSTA*VCLFCF
Trigger: GAAGCAGAAGAGACAGACGCAAGCTGTGGAGCTGAG...CACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCGTGCTGATCTGGCACTaGGACTGGGCAGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLVLIWH*DWAAAF
Trigger: GAAGGCAGCTGCCCAGTCCCAGTGCCAGATCAGCAC...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTCGGAGGGTGCTGATCTaGCACTGGGACTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: EIISIPCTASLQEDDLLVRRVLI*HWDWAA
Trigger: AGCTGCCCAGTCCCAGTGCCAGATCAGCACCCTCCG...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGCCTTTGGCACCTTGTaGATCCCTTCCACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VEQPWVHLYVDFLPTLPPAFGTL*IPSTFL
Trigger: CAGGAAGGTGGAAGGGATCCACAAGGTGCCAAAGGC...GGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATAGTGCTTCAGCAAAGTaGGGTTACGCCTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHSASAK*GYASEL
Trigger: CAGCTCTGAGGCGTAACCCCACTTTGCTGAAGCACT...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp AAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGGCCTTCTGCTCCCGCTaGACTCTCAGCAGGGATTCC +
Preference number: 4 (lower is better)
Translates to: KQRGVEQPWVHLYVDFLPAFCSR*TLSRDS
Trigger: GGAATCCCTGCTGAGAGTCCAGCGGGAGCAGAAGGC...CGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTCCACCTGCAGGGTCCTaGTCTTTGGCTGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: EIISIPCTASLQEDDLLVPPAGS*SLAGPL
Trigger: GAGAGGCCCAGCCAAAGACCAGGACCCTGCAGGTGG...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATTGGGTTTCTCTCTCTaGTCCAGGTCCAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPLGFSL*SRSRGR
Trigger: TCTTCCTCTGGACCTGGACCAGAGAGAGAAACCCAA...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGAGTAGGCCAAGGAGCTaGGAGAAGGCCGTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: DEIISIPCTASLQEDDLLSRPRS*EKAVGS
Trigger: AGACCCCACGGCCTTCTCTCAGCTCCTTGGCCTACT...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAAGGTGTCTGAGAGTCTaGATCGAGATTCCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPRCLRV*IEIPFA
Trigger: TGCAAAGGGAATCTCGATTCAGACTCTCAGACACCT...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCCTTCTCTGGGAGCTTTaGGCGAGACAAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLLLWEL*ARQGLG
Trigger: CCCAAGCCCTTGTCTCGCTCAAAGCTCCCAGAGAAG...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCAGAAACAACGTGGGGTTaGACAGCCATGGGTCCACTT +
Preference number: 4 (lower is better)
Translates to: GVEQPWVHLYVDFLPTLPETTWG*TAMGPL
Trigger: AAGTGGACCCATGGCTGTTCAACCCCACGTTGTTTC...TGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp TTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGTGGTAGCTGTGGGTaGCTGTCTGCATTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LNSHGSTYTWIFFRLCHPCGSCG*LSALAA
Trigger: AGCTGCTAATGCAGACAGGCACCCACAGCTACCACA...CGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCATCCTAGCTTGTTCCTaGAGCTGGGCACGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLILACS*SWARRV
Trigger: CACCCTCCGTGCCCAGCTGCAGGAACAAGCTAGGAT...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp AAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGATCCTAGCTTGTTCCTaGAGCTGGGCACGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KQRGVEQPWVHLYVDFLPILACS*SWARRV
Trigger: CACCCTCCGTGCCCAGCTGCAGGAACAAGCTAGGAT...CGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp TTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCTTCCTCCTGCTTCCTCAAGAATaGAGTCAAGAGGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: FLPTLPPVRQQEQPLLFLLLPQE*SQEENL
Trigger: CAAGTTCTCCTCTTGACTGCATTCTTGAGGAAGCAG...GAGGAAGAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGCCAGCTGGGCAACACTaGCACTCAGGCAATCCTGGC +
Preference number: 4 (lower is better)
Translates to: DEIISIPCTASLQEDDLLPAGQH*HSGNPG
Trigger: GCCAGGATTGCCTGAGTGCCAGTGTTGCCCAGCTGG...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGATGAGCTCTGCTTCCTaGAGCTGCCGCTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: DEIISIPCTASLQEDDLLMSSAS*SCRCLS
Trigger: GGAGAGGCAGCGGCAGCTCCAGGAAGCAGAGCTCAT...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGTGGATCATCTCCTCCTaGGAGGCAATGATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: EQPWVHLYVDFLPTLPPVWIISS*EAMILA
Trigger: AGCTAGGATCATTGCCTCCCAGGAGGAGATGATCCA...CACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp TTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGTGTCCACAGCCTTTaGCACCTTGTGGATCCCTTC +
Preference number: 4 (lower is better)
Translates to: LNSHGSTYTWIFFRLCHPCVHSL*HLVDPF
Trigger: GAAGGGATCCACAAGGTGCCAAAGGCTGTGGACACA...CGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp GAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGGGTGTCCTCCAGGATTaGTCTGAAGTGCTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: EQPWVHLYVDFLPTLPPVGVLQD*SEVLQQ
Trigger: TTGCTGAAGCACTTCAGACCAATCCTGGAGGACACC...CACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGCTAGTCAGGCACCTGTaGCCATCTACAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: DEIISIPCTASLQEDDLLLVRHL*PSTAGP
Trigger: GGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAG...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCACACATATCACAACCCTaGGAAACTCTCCAGGATCAC +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPHISQP*ETLQDH
Trigger: GTGATCCTGGAGAGTTTCCCAGGGTTGTGATATGTG...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATCCAAGTTGCAGAAGGTaGTGCCAGCAATATTCTCCT +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHPSCRR*CQQYSP
Trigger: AGGAGAATATTGCTGGCATCACCTTCTGCAACTTGG...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGCCAAGTTGCAGAAGGTaGTGCCAGCAATATTCTCCT +
Preference number: 4 (lower is better)
Translates to: EQPWVHLYVDFLPTLPPVPSCRR*CQQYSP
Trigger: AGGAGAATATTGCTGGCATCACCTTCTGCAACTTGG...CACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR TCA 90 bp TTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCTTCCTGAAAGGTGGCATTCATaGATGTCTTGTCACACAGGT +
Preference number: 4 (lower is better)
Translates to: FSSDSATRETARATPPLPERWHS*MSCHTG
Trigger: ACCTGTGTGACAAGACATTCATGAATGCCACCTTTC...AGGAAGAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR TCA 90 bp GGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCATTTCCCTCTGATGAATaGGCTCTGCTTCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GVEQPWVHLYVDFLPTLPFPSDE*ALLPGA
Trigger: AGCTCCAGGAAGCAGAGCTCATTCATCAGAGGGAAA...TGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR TCA 90 bp GGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCAGGGATTCCAGGTGTCTaGGAGTCTGAATCGAGATTC +
Preference number: 4 (lower is better)
Translates to: GVEQPWVHLYVDFLPTLPGIPGV*ESESRF
Trigger: GAATCTCGATTCAGACTCTCAGACACCTGGAATCCC...TGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR TCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATCAATCACTGAATGACTaGCTGAGGCATATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHQSLND*LRHMSP
Trigger: TGGGGACATATGCCTCAGTCAGTCATTCAGTGATTG...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAGGATCAATCACTGAATaGCTGACTGAGGCATATGTC +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPGSITE*LTEAYV
Trigger: GACATATGCCTCAGTCAGTCATTCAGTGATTGATCC...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp ATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCAAAGTGCAAGCGCTaGCAGAGTTTACAGCAAATC +
Preference number: 4 (lower is better)
Translates to: IRGFSSDSATRETARATPPKCKR*QSLQQI
Trigger: GATTTGCTGTAAACTCTGTCAGCGCTTGCACTTTGG...AGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp TTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGAGGCAATCCTGGCAGTaGAGCAGGTACTCAATGATG +
Preference number: 4 (lower is better)
Translates to: LNSHGSTYTWIFFRLCHPRQSWQ*SRYSMM
Trigger: CATCATTGAGTACCTGCTGCACTGCCAGGATTGCCT...CGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGACTCCATCACACTGTaGGACTGCAGTGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: DEIISIPCTASLQEDDLLDSITL*DCSARS
Trigger: ACTGCGGGCACTGCAGTCCCACAGTGTGATGGAGTC...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp TTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTTGTGCTGTTCATCCTaGGAGTCCTCCATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LNSHGSTYTWIFFRLCHPLCCSS*ESSISS
Trigger: GGAAGAGATGGAGGACTCCCAGGATGAACAGCACAA...CGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp ATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTGCCAAGTTTCCAAGGTaGCTGCCAGGCAATCATTTA +
Preference number: 4 (lower is better)
Translates to: IRGFSSDSATRETARATPAKFPR*LPGNHL
Trigger: TAAATGATTGCCTGGCAGCCACCTTGGAAACTTGGC...AGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp ATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTGGGTCCACTTATACGTaGATTTTCTTCCGACTCTGC +
Preference number: 4 (lower is better)
Translates to: IRGFSSDSATRETARATPGSTYT*IFFRLC
Trigger: GCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCC...AGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
3UTR CAA 72 bp CCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTaGTTTGTGAAGACAAGAGGCCCAGCAGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PALLLSKRMISW*FVKTRGPAASS
Trigger: AGAAGAGGCTGCTGGGCCTCTTGTCTTCACAAACAACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
3UTR CAA 72 bp ATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTaGGTTGTTTGTGAAGACAAGAGGCCCAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: IPCTASLQEDDL*VVCEDKRPSSL
Trigger: GAGGCTGCTGGGCCTCTTGTCTTCACAAACAACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCCTATCATGGCGAGGCTaGAACTTGAAGGTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLLSWRG*NLKVGN
Trigger: GTTCCCCACCTTCAAGTTTCAGCCTCGCCATGATAG...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATTCCACTCCGTTTTCTaGATTTCTGTCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPFHSVF*ISVFSL
Trigger: GAGAGAGAAGACAGAAATTCAGAAAACGGAGTGGAA...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp AACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCGTCAAGAGGAGAACTTaGGGGAGCCAAGTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: NVGLNSHGSTYTWIFFRLVKRRT*GSQVSK
Trigger: CTTGGAAACTTGGCTCCCTCAAGTTCTCCTCTTGAC...GAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTGCGTCTCCAGTCCATaGTATCATGGCGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLCVSSP*YHGEAE
Trigger: TTCAGCCTCGCCATGATAGCATGGACTGGAGACGCA...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTTACTCAATGATGAGCTaGGCCAGGCGCAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: EIISIPCTASLQEDDLLVYSMMS*ARRSTL
Trigger: CAAGGTGCTGCGCCTGGCGCAGCTCATCATTGAGTA...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp CGAAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCGTCTGCATTAGCAGCTaGTGCAGGGTGCTGATCATC +
Preference number: 4 (lower is better)
Translates to: RNNVGLNSHGSTYTWIFFVCISS*CRVLII
Trigger: GATGATCAGCACCCTGCAGCAGCTGCTAATGCAGAC...GAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCATCACACTGTGGGACTaGAGTGCCCGCAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLITLWD*SARSFS
Trigger: AGAGAAACTGCGGGCACTGCAGTCCCACAGTGTGAT...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp ATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTTTCTTCTCAGCCATGTaGTCTTCATGCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: IRGFSSDSATRETARATPFFSAM*SSCSSF
Trigger: GAAGGAACTGCATGAAGAGCACATGGCTGAGAAGAA...AGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp GAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGGATTGGTCTGAAGTaGTTCAGCAAAGTGGGGTTA +
Preference number: 4 (lower is better)
Translates to: EQPWVHLYVDFLPTLPPVRIGLK*FSKVGL
Trigger: TAACCCCACTTTGCTGAAGCACTTCAGACCAATCCT...CACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGCAGTGATCCCAGCTTaGACTCCATCACACTGTGGG +
Preference number: 4 (lower is better)
Translates to: DEIISIPCTASLQEDDLLAVIPA*TPSHCG
Trigger: CCCACAGTGTGATGGAGTCCAAGCTGGGATCACTGC...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp CGAAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCAGTGCTTCAGCAAAGTaGGGTTACGCCTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RNNVGLNSHGSTYTWIFFSASAK*GYASEL
Trigger: CAGCTCTGAGGCGTAACCCCACTTTGCTGAAGCACT...GAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCACCAGTGTGCTCTGCTaGCTTTTGACTGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLTSVLC*LLTEGC
Trigger: GCAGCCTTCAGTCAAAAGCCAGCAGAGCACACTGGT...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTCCAGGCTGGGATAGATaGCCTCTCATATGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: EIISIPCTASLQEDDLLVPGWDR*PLICSP
Trigger: TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGG...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp CAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGATTCCACTCCGTTTTCTaGATTTCTGTCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: QPWVHLYVDFLPTLPPVRFHSVF*ISVFSL
Trigger: GAGAGAGAAGACAGAAATTCAGAAAACGGAGTGGAA...TCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR TCA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGCACACGGTCTCCCTCTaGGTCCTCTTCAGAACTGAA +
Preference number: 4 (lower is better)
Translates to: DEIISIPCTASLQEDDLLHTVSL*VLFRTE
Trigger: TTCAGTTCTGAAGAGGACTCAGAGGGAGACCGTGTG...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTCTGCATTAGCAGCTaGTGCAGGGTGCTGATCATC +
Preference number: 4 (lower is better)
Translates to: DEIISIPCTASLQEDDLLVCISS*CRVLII
Trigger: GATGATCAGCACCCTGCAGCAGCTGCTAATGCAGAC...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATCTCCACAGTGTTCCTaGAGTTTTATAAAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPSPQCS*SFIKGL
Trigger: CAAGCCTTTTATAAAACTGCAGGAACACTGTGGAGA...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGTTTCCAAGGTGGCTaGCAGGCAATCATTTACAAA +
Preference number: 4 (lower is better)
Translates to: EQPWVHLYVDFLPTLPPVSFQGG*QAIIYK
Trigger: TTTGTAAATGATTGCCTGGCAGCCACCTTGGAAACT...CACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp AAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGGGGTCCACTTTAGCTTaGCCCGTAGCTCTTCTAACA +
Preference number: 4 (lower is better)
Translates to: KQRGVEQPWVHLYVDFLPGSTLA*PVALLT
Trigger: TGTTAGAAGAGCTACGGGCCAAGCTAAAGTGGACCC...CGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTGGATCATCTCCTCCTaGGAGGCAATGATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLWIISS*EAMILA
Trigger: AGCTAGGATCATTGCCTCCCAGGAGGAGATGATCCA...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGTGCTGTTCATCCTaGGAGTCCTCCATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLLCCSS*ESSISS
Trigger: GGAAGAGATGGAGGACTCCCAGGATGAACAGCACAA...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTTTGGCCAGAGCTCTGTaGACCAGTGCCAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: EIISIPCTASLQEDDLLVLARAL*TSAKLL
Trigger: GAGAAGTTTGGCACTGGTCCACAGAGCTCTGGCCAA...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp CGAAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCGGGGTTGAACAGCCATaGGTCCACTTATACGTGGAT +
Preference number: 4 (lower is better)
Translates to: RNNVGLNSHGSTYTWIFFGVEQP*VHLYVD
Trigger: ATCCACGTATAAGTGGACCCATGGCTGTTCAACCCC...GAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR TCA 90 bp AAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGAGGTGTCTGAGAGTCTaGATCGAGATTCCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: KQRGVEQPWVHLYVDFLPRCLRV*IEIPFA
Trigger: TGCAAAGGGAATCTCGATTCAGACTCTCAGACACCT...CGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR TCA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGGGATTCCAGGTGTCTaGGAGTCTGAATCGAGATTC +
Preference number: 4 (lower is better)
Translates to: DEIISIPCTASLQEDDLLGIPGV*ESESRF
Trigger: GAATCTCGATTCAGACTCTCAGACACCTGGAATCCC...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTACAGGTCAGGAGGGATaGGATCATATCCATTCCCTG +
Preference number: 4 (lower is better)
Translates to: EIISIPCTASLQEDDLLVTGQEG*DHIHSL
Trigger: CAGGGAATGGATATGATCTCATCCCTCCTGACCTGT...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGTGCATTAGCAGCTGCTaGAGGGTGCTGATCATCTTG +
Preference number: 4 (lower is better)
Translates to: DEIISIPCTASLQEDDLLCISSC*RVLIIL
Trigger: CAAGATGATCAGCACCCTGCAGCAGCTGCTAATGCA...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp TTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGGCCATGTGCTCTTCATaGAGTTCCTTCACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LNSHGSTYTWIFFRLCHPAMCSS*SSFTFL
Trigger: AAGAAAAGTGAAGGAACTGCATGAAGAGCACATGGC...CGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGTTTTTGACCATCGACTaGACCAGTGTTCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: DEIISIPCTASLQEDDLLFLTID*TSVPEP
Trigger: GGGCTCAGGAACACTGGTGCAGTCGATGGTCAAAAA...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTGGGTCCACTTTAGCTTaGCCCGTAGCTCTTCTAACA +
Preference number: 4 (lower is better)
Translates to: EIISIPCTASLQEDDLLVGSTLA*PVALLT
Trigger: TGTTAGAAGAGCTACGGGCCAAGCTAAAGTGGACCC...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTGGTGTCCTCCAGGATTaGTCTGAAGTGCTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: EIISIPCTASLQEDDLLVGVLQD*SEVLQQ
Trigger: TTGCTGAAGCACTTCAGACCAATCCTGGAGGACACC...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAAAGAGGATGATCTCTTaGTTGTTTGTGAAGACAAGA +
Preference number: 4 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPKRMIS*LFVKTR
Trigger: TCTTGTCTTCACAAACAACCAAGAGATCATCCTCTT...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCGAAAGGTGGCATTCATaGATGTCTTGTCACACAGGT +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLERWHS*MSCHTG
Trigger: ACCTGTGTGACAAGACATTCATGAATGCCACCTTTC...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR TCA 90 bp GGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCAAGATCAGAAAATGTTTaGAATACAGTTGACCCCGAA +
Preference number: 4 (lower is better)
Translates to: GVEQPWVHLYVDFLPTLPRSENV*NTVDPE
Trigger: TTCGGGGTCAACTGTATTTCAAACATTTTCTGATCT...TGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATAGTTTGGTCCACTCTTaGTCTTTCCATTTATCAAAT +
Preference number: 4 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHSLVHS*SFHLSN
Trigger: ATTTGATAAATGGAAAGAGCAAGAGTGGACCAAACT...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCGCCATGTGCTCTTCATaGAGTTCCTTCACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RDEIISIPCTASLQEDDLAMCSS*SSFTFL
Trigger: AAGAAAAGTGAAGGAACTGCATGAAGAGCACATGGC...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGTTCTTCTCAGCCATGTaGTCTTCATGCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: DEIISIPCTASLQEDDLLFFSAM*SSCSSF
Trigger: GAAGGAACTGCATGAAGAGCACATGGCTGAGAAGAA...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTAGGATTGGTCTGAAGTaGTTCAGCAAAGTGGGGTTA +
Preference number: 4 (lower is better)
Translates to: EIISIPCTASLQEDDLLVRIGLK*FSKVGL
Trigger: TAACCCCACTTTGCTGAAGCACTTCAGACCAATCCT...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CCA 90 bp CGAAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCTTTCCCCATAAAGTTTaGTCCACTCTTGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RNNVGLNSHGSTYTWIFFFPHKV*STLALS
Trigger: GGAAAGAGCAAGAGTGGACCAAACTTTATGGGGAAA...GAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
3UTR CAA 72 bp TTTGGAAATAATATCAAAAATTACACGTGTGGTCCTTaGGGGATACAAGGTCCAGCCAAGTGGCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: FGNNIKNYTCGP*GIQGPAKWPSS
Trigger: GGAGGATGGCCACTTGGCTGGACCTTGTATCCCCAAAGGACCACACGTGTAATTTTTGATATTATTTCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR GCA 90 bp ACCCCGAAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTAGTTTGGTCCACTCTTaGTCTTTCCATTTATCAAAT +
Preference number: 4 (lower is better)
Translates to: TPKQRGVEQPWVHLYVDFSLVHS*SFHLSN
Trigger: ATTTGATAAATGGAAAGAGCAAGAGTGGACCAAACT...AAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTTCGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp CAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTTCTAGTGTAGAGTTCTaGTTGGCGACATTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: QRGVEQPWVHLYVDFLPTSSVEF*LATFLN
Trigger: ATTTAAAAATGTCGCCAAGCAGAACTCTACACTAGA...AGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR GCA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTTCTAGTGTAGAGTTCTaGTTGGCGACATTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: EIISIPCTASLQEDDLLVSSVEF*LATFLN
Trigger: ATTTAAAAATGTCGCCAAGCAGAACTCTACACTAGA...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS GCA 90 bp CCAGCCCCACGCAGTCCGGGCGCTCTCTGCGGCGGAGGCAGAGCCTaGCCGGCCCACTCCAGTGCCGCCAACCTGCGGGACCGCGGACAG +
Preference number: 5 (lower is better)
Translates to: PAPRSPGALCGGGRA*PAHSSAANLRDRGQ
Trigger: CTGTCCGCGGTCCCGCAGGTTGGCGGCACTGGAGTGGGCCGGGCAGGCTCTGCCTCCGCCGCAGAGAGCGCCCGGACTGCGTGGGGCTGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000467030.5
ENST00000492010.1
CDS GCA 90 bp GGGCGCTCTCTGCGGCGGAGGCAGAGCCTGCCCGGCCCACTCCAGTaGCGCCAACCTGCGGGACCGCGGACAGAGAGCTCCTCGGTGCGT +
Preference number: 5 (lower is better)
Translates to: GRSLRRRQSLPGPLQ*RQPAGPRTESSSVR
Trigger: ACGCACCGAGGAGCTCTCTGTCCGCGGTCCCGCAGGTTGGCGGCACTGGAGTGGGCCGGGCAGGCTCTGCCTCCGCCGCAGAGAGCGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000467030.5
ENST00000492010.1
CDS GCA 90 bp CGTTCCCGGGATGCTTCCCCAGCCCCACGCAGTCCGGGCGCTCTCTaGGGCGGAGGCAGAGCCTGCCCGGCCCACTCCAGTGCCGCCAAC +
Preference number: 5 (lower is better)
Translates to: RSRDASPAPRSPGAL*GGGRACPAHSSAAN
Trigger: GTTGGCGGCACTGGAGTGGGCCGGGCAGGCTCTGCCTCCGCCGCAGAGAGCGCCCGGACTGCGTGGGGCTGGGGAAGCATCCCGGGAACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000467030.5
ENST00000492010.1
CDS GCA 90 bp CCCAGAGATGGTTCCCGGAATGCTCACCGCCCGCCGTTCCCGGGATaGTTCCCCAGCCCCACGCAGTCCGGGCGCTCTCTGCGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: PRDGSRNAHRPPFPG*FPSPTQSGRSLRRR
Trigger: CCTCCGCCGCAGAGAGCGCCCGGACTGCGTGGGGCTGGGGAAGCATCCCGGGAACGGCGGGCGGTGAGCATTCCGGGAACCATCTCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000492010.1
CDS CCA 90 bp GACCGCGGACAGAGAGCTCCTCGGTGCGTCGGTCAGCTCGTGGCTTaGGGTCTCTGGTGCCTCCAGCTCCTACTACAGCCGCCCCGCCCC +
Preference number: 5 (lower is better)
Translates to: DRGQRAPRCVGQLVA*GLWCLQLLLQPPRP
Trigger: GGGGCGGGGCGGCTGTAGTAGGAGCTGGAGGCACCAGAGACCCCAAGCCACGAGCTGACCGACGCACCGAGGAGCTCTCTGTCCGCGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492010.1
CDS TCA 90 bp GGGGCGGACACCTGGGTCAGGCTGGAGCCATGGCTGCCATGGCTCTaGCGAGTTGGTGGGGGTGGCTCTGCCGGTGTGGATGGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: GADTWVRLEPWLPWL*RVGGGGSAGVDGKA
Trigger: GGCCTTGCCATCCACACCGGCAGAGCCACCCCCACCAACTCGTCAGAGCCATGGCAGCCATGGCTCCAGCCTGACCCAGGTGTCCGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS GCA 90 bp TCCAGTGCCGCCAACCTGCGGGACCGCGGACAGAGAGCTCCTCGGTaGGTCGGTCAGCTCGTGGCTTGGGGTCTCTGGTGCCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SSAANLRDRGQRAPR*VGQLVAWGLWCLQL
Trigger: GAGCTGGAGGCACCAGAGACCCCAAGCCACGAGCTGACCGACGCACCGAGGAGCTCTCTGTCCGCGGTCCCGCAGGTTGGCGGCACTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492010.1
CDS CCA 90 bp CGTCCCGCCTCCAGACTTGCTCCACCGCCCCAGACAGCCCAGAGATaGTTCCCGGAATGCTCACCGCCCGCCGTTCCCGGGATGCTTCCC +
Preference number: 5 (lower is better)
Translates to: RPASRLAPPPQTAQR*FPECSPPAVPGMLP
Trigger: GGGAAGCATCCCGGGAACGGCGGGCGGTGAGCATTCCGGGAACCATCTCTGGGCTGTCTGGGGCGGTGGAGCAAGTCTGGAGGCGGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000492010.1
CDS CCA 90 bp TGCGGGACCGCGGACAGAGAGCTCCTCGGTGCGTCGGTCAGCTCGTaGCTTGGGGTCTCTGGTGCCTCCAGCTCCTACTACAGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: CGTADRELLGASVSS*LGVSGASSSYYSRP
Trigger: GGGGCGGCTGTAGTAGGAGCTGGAGGCACCAGAGACCCCAAGCCACGAGCTGACCGACGCACCGAGGAGCTCTCTGTCCGCGGTCCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492010.1
CDS GCA 90 bp CGAGGTGGCGGCTCCCATACTCGCCCCACGTCCCGCCTCCAGACTTaGTCCACCGCCCCAGACAGCCCAGAGATGGTTCCCGGAATGCTC +
Preference number: 5 (lower is better)
Translates to: RGGGSHTRPTSRLQT*STAPDSPEMVPGML
Trigger: GAGCATTCCGGGAACCATCTCTGGGCTGTCTGGGGCGGTGGAGCAAGTCTGGAGGCGGGACGTGGGGCGAGTATGGGAGCCGCCACCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000492010.1
CDS GCA 90 bp AGCTGCGCCAGGCGCAGCACCTTGAGCAGTGCCGGGTCCACAGGCTaGCCACAGCGGCTGCACACCTCCCGGTCCAAGTTGCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SCARRSTLSSAGSTG*PQRLHTSRSKLQKV
Trigger: CACCTTCTGCAACTTGGACCGGGAGGTGTGCAGCCGCTGTGGGCAGCCTGTGGACCCGGCACTGCTCAAGGTGCTGCGCCTGGCGCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS GCA 90 bp CAGGTACTCAATGATGAGCTGCGCCAGGCGCAGCACCTTGAGCAGTaGCGGGTCCACAGGCTGCCCACAGCGGCTGCACACCTCCCGGTC +
Preference number: 5 (lower is better)
Translates to: QVLNDELRQAQHLEQ*RVHRLPTAAAHLPV
Trigger: GACCGGGAGGTGTGCAGCCGCTGTGGGCAGCCTGTGGACCCGGCACTGCTCAAGGTGCTGCGCCTGGCGCAGCTCATCATTGAGTACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS CCA 90 bp CCACGCTGCTGCTGGCCCAGGCTGGTCTGCAGCCGTGCCTCCAGCTaGGCAACACTGGCACTCAGGCAATCCTGGCAGTGCAGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: PRCCWPRLVCSRASS*ATLALRQSWQCSRY
Trigger: GTACCTGCTGCACTGCCAGGATTGCCTGAGTGCCAGTGTTGCCCAGCTGGAGGCACGGCTGCAGACCAGCCTGGGCCAGCAGCAGCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS CCA 90 bp CTGGGTCAGGCTGGAGCCATGGCTGCCATGGCTCTGACGAGTTGGTaGGGGTGGCTCTGCCGGTGTGGATGGCAAGGCCACCTGCAGGGT +
Preference number: 5 (lower is better)
Translates to: LGQAGAMAAMALTSW*GWLCRCGWQGHLQG
Trigger: ACCCTGCAGGTGGCCTTGCCATCCACACCGGCAGAGCCACCCCCACCAACTCGTCAGAGCCATGGCAGCCATGGCTCCAGCCTGACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS CCA 90 bp CACCTGGGTCAGGCTGGAGCCATGGCTGCCATGGCTCTGACGAGTTaGTGGGGGTGGCTCTGCCGGTGTGGATGGCAAGGCCACCTGCAG +
Preference number: 5 (lower is better)
Translates to: HLGQAGAMAAMALTS*WGWLCRCGWQGHLQ
Trigger: CTGCAGGTGGCCTTGCCATCCACACCGGCAGAGCCACCCCCACCAACTCGTCAGAGCCATGGCAGCCATGGCTCCAGCCTGACCCAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGCCAGGCGCAGCACCTaGAGCAGTGCCGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSARRST*SSAGST
Trigger: TGTGGACCCGGCACTGCTCAAGGTGCTGCGCCTGGC...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGCAGTCCCAGTCATCCTaGGGCCGGGGCACCATCCTG +
Preference number: 5 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQQSQSS*GRGTIL
Trigger: CAGGATGGTGCCCCGGCCCAAGGATGACTGGGACTG...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS GCA 90 bp GCACTCAGGCAATCCTGGCAGTGCAGCAGGTACTCAATGATGAGCTaGGCCAGGCGCAGCACCTTGAGCAGTGCCGGGTCCACAGGCTGC +
Preference number: 5 (lower is better)
Translates to: ALRQSWQCSRYSMMS*ARRSTLSSAGSTGC
Trigger: GCAGCCTGTGGACCCGGCACTGCTCAAGGTGCTGCGCCTGGCGCAGCTCATCATTGAGTACCTGCTGCACTGCCAGGATTGCCTGAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS GCA 90 bp CAGCTGGGCACGGAGGGTGCTGATCTGGCACTGGGACTGGGCAGCTaGCTTCTTCTGATCCTGAGACAGGGAGGCCTGGAGCCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: QLGTEGADLALGLGS*LLLILRQGGLEPLV
Trigger: AACCAGAGGCTCCAGGCCTCCCTGTCTCAGGATCAGAAGAAGGCAGCTGCCCAGTCCCAGTGCCAGATCAGCACCCTCCGTGCCCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS GCA 90 bp CGTGCCTCCAGCTGGGCAACACTGGCACTCAGGCAATCCTGGCAGTaGAGCAGGTACTCAATGATGAGCTGCGCCAGGCGCAGCACCTTG +
Preference number: 5 (lower is better)
Translates to: RASSWATLALRQSWQ*SRYSMMSCARRSTL
Trigger: CAAGGTGCTGCGCCTGGCGCAGCTCATCATTGAGTACCTGCTGCACTGCCAGGATTGCCTGAGTGCCAGTGTTGCCCAGCTGGAGGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS GCA 90 bp GCAAGAGCAACCCCTCCTCTTCCTCCTCCTCTTCAGCCTGAAGGCTaGCCGTCTGGCTGGGACACCACAGCGCCATTCTCCTGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: ARATPPLPPPLQPEG*PSGWDTTAPFSCLS
Trigger: GGAGAGACAGGAGAATGGCGCTGTGGTGTCCCAGCCAGACGGGCAGCCTTCAGGCTGAAGAGGAGGAGGAAGAGGAGGGGTTGCTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CAA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAACCTCCCGGTCCAAGTaGCAGAAGGTGATGCCAGCA +
Preference number: 5 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSTSRSK*QKVMPA
Trigger: TGCTGGCATCACCTTCTGCAACTTGGACCGGGAGGT...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS CCA 90 bp ATCATCTCCTCCTGGGAGGCAATGATCCTAGCTTGTTCCTGCAGCTaGGCACGGAGGGTGCTGATCTGGCACTGGGACTGGGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: IISSWEAMILACSCS*ARRVLIWHWDWAAA
Trigger: GGCAGCTGCCCAGTCCCAGTGCCAGATCAGCACCCTCCGTGCCCAGCTGCAGGAACAAGCTAGGATCATTGCCTCCCAGGAGGAGATGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS-3UTR CAA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCATACACGTGTGGTCCTTaGGGGATACAAGGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSYTCGP*GIQGPA
Trigger: GGCTGGACCTTGTATCCCCAAAGGACCACACGTGTA...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS TCA 90 bp GCTGCCCACAGCGGCTGCACACCTCCCGGTCCAAGTTGCAGAAGGTaGTGCCAGCAATATTCTCCTGCAGAGTGGCCACATCCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: AAHSGCTPPGPSCRR*CQQYSPAEWPHPVP
Trigger: GGGAACTGGATGTGGCCACTCTGCAGGAGAATATTGCTGGCATCACCTTCTGCAACTTGGACCGGGAGGTGTGCAGCCGCTGTGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS GCA 90 bp GACTGGATCATCTCCTCCTGGGAGGCAATGATCCTAGCTTGTTCCTaGAGCTGGGCACGGAGGGTGCTGATCTGGCACTGGGACTGGGCA +
Preference number: 5 (lower is better)
Translates to: DWIISSWEAMILACS*SWARRVLIWHWDWA
Trigger: TGCCCAGTCCCAGTGCCAGATCAGCACCCTCCGTGCCCAGCTGCAGGAACAAGCTAGGATCATTGCCTCCCAGGAGGAGATGATCCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS TCA 90 bp CTGCATGCCTGCGCTGGATGTGGCCCCGGAGAAAGGTGGCATTCATaGATGTCTTGTCACACAGGTGGCACGTGTGGTAGCTGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: LHACAGCGPGERWHS*MSCHTGGTCGSCGC
Trigger: GCACCCACAGCTACCACACGTGCCACCTGTGTGACAAGACATTCATGAATGCCACCTTTCTCCGGGGCCACATCCAGCGCAGGCATGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS GCA 90 bp ACCTCCCGGTCCAAGTTGCAGAAGGTGATGCCAGCAATATTCTCCTaGAGAGTGGCCACATCCAGTTCCCGGGCCACGCGGTCTACATCC +
Preference number: 5 (lower is better)
Translates to: TSRSKLQKVMPAIFS*RVATSSSRATRSTS
Trigger: GGATGTAGACCGCGTGGCCCGGGAACTGGATGTGGCCACTCTGCAGGAGAATATTGCTGGCATCACCTTCTGCAACTTGGACCGGGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS CCA 90 bp CCGCCTCCCTCTGGGCTTCCAGCTCCCCTTGGGTCCACTTTAGCTTaGCCCGTAGCTCTTCTAACACCTCTTCCACTGGCTGTTCCTGTT +
Preference number: 5 (lower is better)
Translates to: PPPSGLPAPLGSTLA*PVALLTPLPLAVPV
Trigger: AACAGGAACAGCCAGTGGAAGAGGTGTTAGAAGAGCTACGGGCCAAGCTAAAGTGGACCCAAGGGGAGCTGGAAGCCCAGAGGGAGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS-3UTR CAA 90 bp GGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCAGCCAGGCGCAGCACCTaGAGCAGTGCCGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: GVEQPWVHLYVDFLPTLPARRST*SSAGST
Trigger: TGTGGACCCGGCACTGCTCAAGGTGCTGCGCCTGGC...TGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CAA 90 bp GGGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCATGCTTCTCCAGGTTTTaGACCATCGACTGCACCAGT +
Preference number: 5 (lower is better)
Translates to: GAPSQAPVAIYSRAPHRSCFSRF*TIDCTS
Trigger: ACTGGTGCAGTCGATGGTCAAAAACCTGGAGAAGCA...TGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS TCA 90 bp CAGCAGGCTTCTTTGCTGGAGCTTCTAGCTGCTTCTCCAGGTTTTTaGCCATCGACTGCACCAGTGTTCCTGAGCCCTGGCCAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: QQASLLELLAASPGF*PSTAPVFLSPGQGA
Trigger: AGCCCCCTGGCCAGGGCTCAGGAACACTGGTGCAGTCGATGGTCAAAAACCTGGAGAAGCAGCTAGAAGCTCCAGCAAAGAAGCCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000486487.1
CDS TCA 90 bp GTGTTGGGGATTCTAAATTCTCCCTGTATTTCAGCAGGGCTTGTCTaGACCCGACTCAGCTCCACAGCTTGCGTCCGCCCGCCGTTCCCG +
Preference number: 5 (lower is better)
Translates to: VLGILNSPCISAGLV*TRLSSTACVRPPFP
Trigger: CGGGAACGGCGGGCGGACGCAAGCTGTGGAGCTGAGTCGGGTTCAGACAAGCCCTGCTGAAATACAGGGAGAATTTAGAATCCCCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467030.5
CDS-3UTR CAA 90 bp GGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCATCCTCCCGCACACCCTaGAGCTCGTCAGCCTGGCGT +
Preference number: 5 (lower is better)
Translates to: GVEQPWVHLYVDFLPTLPSSRTP*SSSAWR
Trigger: ACGCCAGGCTGACGAGCTCAAGGGTGTGCGGGAGGA...TGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CAA 90 bp CTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCAGGGTGCTGATCATCTaGCGACGCCGGCGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LIRGFSSDSATRETARATRVLII*RRRRLS
Trigger: GGAGAGCCGCCGGCGTCGCAAGATGATCAGCACCCT...GGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CAA 90 bp TTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCTTCCTCGGCAATGATCCTAGCTaGTTCCTGCAGCTGGGCACG +
Preference number: 5 (lower is better)
Translates to: FLPTLPPVRQQEQPLLFLGNDPS*FLQLGT
Trigger: CGTGCCCAGCTGCAGGAACAAGCTAGGATCATTGCC...GAGGAAGAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS GCA 90 bp TGCTTCAGCAAAGTGGGGTTACGCCTCAGAGCTGCCAGCACCTTGTaGTGTTCATCCTGGGAGTCCTCCATCTCTTCCTCTGGAGAGTCC +
Preference number: 5 (lower is better)
Translates to: CFSKVGLRLRAASTL*CSSWESSISSSGES
Trigger: GGACTCTCCAGAGGAAGAGATGGAGGACTCCCAGGATGAACAGCACAAGGTGCTGGCAGCTCTGAGGCGTAACCCCACTTTGCTGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000488595.1
CDS-3UTR CAA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCACGCAGTGATCCCAGCTaGGACTCCATCACACTGTGG +
Preference number: 5 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPRSDPS*DSITLW
Trigger: CCACAGTGTGATGGAGTCCAAGCTGGGATCACTGCG...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGAGGATGATCTCTTGGTaGTTTGTGAAGACAAGAGGC +
Preference number: 5 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQRMISW*FVKTRG
Trigger: GCCTCTTGTCTTCACAAACAACCAAGAGATCATCCT...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS TCA 90 bp CCATGCTTTCGAGCTTCTCTTCCAGGGTGTCCTCCAGGATTGGTCTaGAGTGCTTCAGCAAAGTGGGGTTACGCCTCAGAGCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: PCFRASLPGCPPGLV*SASAKWGYASELPA
Trigger: TGCTGGCAGCTCTGAGGCGTAACCCCACTTTGCTGAAGCACTTCAGACCAATCCTGGAGGACACCCTGGAAGAGAAGCTCGAAAGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000488595.1
CDS TCA 90 bp GGGCCTTCTGCTCCCGCTGGACTCTCAGCAGGGATTCCAGGTGTCTaGGAGTCTGAATCGAGATTCCCTTTGCATCCTTCCTTATCCCCA +
Preference number: 5 (lower is better)
Translates to: GPSAPAGLSAGIPGV*ESESRFPLHPSLSP
Trigger: TGGGGATAAGGAAGGATGCAAAGGGAATCTCGATTCAGACTCTCAGACACCTGGAATCCCTGCTGAGAGTCCAGCGGGAGCAGAAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS TCA 90 bp CATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTaGGACAGCAAGAGCAACCCCTCCTCTTCCTCCTCCTCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: HGSTYTWIFFRLCHP*DSKSNPSSSSSSSA
Trigger: GGCTGAAGAGGAGGAGGAAGAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS TCA 90 bp GTGTTGGGGATTCTAAATTCTCCCTGTATTTCAGCAGGGCTTGTCTaGACCCGACTCAGCTCCACAGCTTGCGTCCGTGGGGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: VLGILNSPCISAGLV*TRLSSTACVRGVSW
Trigger: CCAGGAGACCCCACGGACGCAAGCTGTGGAGCTGAGTCGGGTTCAGACAAGCCCTGCTGAAATACAGGGAGAATTTAGAATCCCCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492010.1
CDS GCA 90 bp CTTTCGAGCTTCTCTTCCAGGGTGTCCTCCAGGATTGGTCTGAAGTaGTTCAGCAAAGTGGGGTTACGCCTCAGAGCTGCCAGCACCTTG +
Preference number: 5 (lower is better)
Translates to: LSSFSSRVSSRIGLK*FSKVGLRLRAASTL
Trigger: CAAGGTGCTGGCAGCTCTGAGGCGTAACCCCACTTTGCTGAAGCACTTCAGACCAATCCTGGAGGACACCCTGGAAGAGAAGCTCGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000488595.1
CDS CCA 90 bp TTCTGTTTTCCACCTTCTGCCACGCCTGCATGCCTGCGCTGGATGTaGCCCCGGAGAAAGGTGGCATTCATGAATGTCTTGTCACACAGG +
Preference number: 5 (lower is better)
Translates to: FCFPPSATPACLRWM*PRRKVAFMNVLSHR
Trigger: CCTGTGTGACAAGACATTCATGAATGCCACCTTTCTCCGGGGCCACATCCAGCGCAGGCATGCAGGCGTGGCAGAAGGTGGAAAACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS-3UTR CAA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTGTCCCGCCTCCAGACTaGCTCCACCGCCCCAGACAG +
Preference number: 5 (lower is better)
Translates to: EIISIPCTASLQEDDLLVVPPPD*LHRPRQ
Trigger: CTGTCTGGGGCGGTGGAGCAAGTCTGGAGGCGGGAC...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp CAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACGCAGTGATCCCAGCTaGGACTCCATCACACTGTGG +
Preference number: 5 (lower is better)
Translates to: QPWVHLYVDFLPTLPPVRRSDPS*DSITLW
Trigger: CCACAGTGTGATGGAGTCCAAGCTGGGATCACTGCG...TCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CAA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAACAGCCTTTGGCACCTaGTGGATCCCTTCCACCTTC +
Preference number: 5 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPTAFGT*WIPSTF
Trigger: GAAGGTGGAAGGGATCCACAAGGTGCCAAAGGCTGT...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp TTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCTTCCTCTGTGTCCACAGCCTTaGGCACCTTGTGGATCCCTT +
Preference number: 5 (lower is better)
Translates to: FSSDSATRETARATPPLPLCPQP*APCGSL
Trigger: AAGGGATCCACAAGGTGCCAAAGGCTGTGGACACAG...AGGAAGAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CAA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATGTGCTCTGCTGGCTTTaGACTGAAGGCTGCCCGTCT +
Preference number: 5 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHVLCWL*TEGCPS
Trigger: AGACGGGCAGCCTTCAGTCAAAAGCCAGCAGAGCAC...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATGAGCGAGACAAGGGCTaGGGTTTCTCTCTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHERDKG*GFSLWS
Trigger: GGACCAGAGAGAGAAACCCAAGCCCTTGTCTCGCTC...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp CGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTACTCAGCTCCACAGCTaGCGTCTGTCTCTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: RGFSSDSATRETARATPPTQLHS*RLSLLL
Trigger: AAGCAGAAGAGACAGACGCAAGCTGTGGAGCTGAGT...AGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS GCA 90 bp GATTGGTCTGAAGTGCTTCAGCAAAGTGGGGTTACGCCTCAGAGCTaGCAGCACCTTGTGCTGTTCATCCTGGGAGTCCTCCATCTCTTC +
Preference number: 5 (lower is better)
Translates to: DWSEVLQQSGVTPQS*QHLVLFILGVLHLF
Trigger: GAAGAGATGGAGGACTCCCAGGATGAACAGCACAAGGTGCTGGCAGCTCTGAGGCGTAACCCCACTTTGCTGAAGCACTTCAGACCAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000488595.1
CDS GCA 90 bp AGCTTTCCCCTCAGACTCAGAAATTCAGAAAACTTCCGGGCCTTCTaGTCCCGCTGGACTCTCAGCAGGGATTCCAGGTGTCTGAGAGTC +
Preference number: 5 (lower is better)
Translates to: SFPLRLRNSENFRAF*SRWTLSRDSRCLRV
Trigger: GACTCTCAGACACCTGGAATCCCTGCTGAGAGTCCAGCGGGAGCAGAAGGCCCGGAAGTTTTCTGAATTTCTGAGTCTGAGGGGAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS CCA 90 bp GACTCCTCATCTCGCAGTGATCCCAGCTTGGACTCCATCACACTGTaGGACTGCAGTGCCCGCAGTTTCTCTTCTAGTGTAGAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: DSSSRSDPSLDSITL*DCSARSFSSSVEFC
Trigger: GCAGAACTCTACACTAGAAGAGAAACTGCGGGCACTGCAGTCCCACAGTGTGATGGAGTCCAAGCTGGGATCACTGCGAGATGAGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000488595.1
CDS CCA 90 bp TATCCCCATGCTTTCGAGCTTCTCTTCCAGGGTGTCCTCCAGGATTaGTCTGAAGTGCTTCAGCAAAGTGGGGTTACGCCTCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: YPHAFELLFQGVLQD*SEVLQQSGVTPQSC
Trigger: GCAGCTCTGAGGCGTAACCCCACTTTGCTGAAGCACTTCAGACCAATCCTGGAGGACACCCTGGAAGAGAAGCTCGAAAGCATGGGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000488595.1
CDS-3UTR CAA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGTCCTCCCGCACACCCTaGAGCTCGTCAGCCTGGCGT +
Preference number: 5 (lower is better)
Translates to: DEIISIPCTASLQEDDLLSSRTP*SSSAWR
Trigger: ACGCCAGGCTGACGAGCTCAAGGGTGTGCGGGAGGA...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGAGGGTGCTGATCATCTaGCGACGCCGGCGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: DEIISIPCTASLQEDDLLRVLII*RRRRLS
Trigger: GGAGAGCCGCCGGCGTCGCAAGATGATCAGCACCCT...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp TTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTCTTCCTCGCATTCATGAATGTCTaGTCACACAGGTGGCACGTG +
Preference number: 5 (lower is better)
Translates to: FLPTLPPVRQQEQPLLFLAFMNV*SHRWHV
Trigger: CACGTGCCACCTGTGTGACAAGACATTCATGAATGC...GAGGAAGAGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CAA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATCTGTGTCCACAGCCTTaGGCACCTTGTGGATCCCTT +
Preference number: 5 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHLCPQP*APCGSL
Trigger: AAGGGATCCACAAGGTGCCAAAGGCTGTGGACACAG...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGCATGGCTCTGACGAGTaGGTGGGGGTGGCTCTGCCG +
Preference number: 5 (lower is better)
Translates to: DEIISIPCTASLQEDDLLHGSDE*VGVALP
Trigger: CGGCAGAGCCACCCCCACCAACTCGTCAGAGCCATG...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS TCA 90 bp TGCTCCCGCTGGACTCTCAGCAGGGATTCCAGGTGTCTGAGAGTCTaGATCGAGATTCCCTTTGCATCCTTCCTTATCCCCATGCTTTCG +
Preference number: 5 (lower is better)
Translates to: CSRWTLSRDSRCLRV*IEIPFASFLIPMLS
Trigger: CGAAAGCATGGGGATAAGGAAGGATGCAAAGGGAATCTCGATTCAGACTCTCAGACACCTGGAATCCCTGCTGAGAGTCCAGCGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS CCA 90 bp TGTTTCTTCTGTTTTCCACCTTCTGCCACGCCTGCATGCCTGCGCTaGATGTGGCCCCGGAGAAAGGTGGCATTCATGAATGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: CFFCFPPSATPACLR*MWPRRKVAFMNVLS
Trigger: TGACAAGACATTCATGAATGCCACCTTTCTCCGGGGCCACATCCAGCGCAGGCATGCAGGCGTGGCAGAAGGTGGAAAACAGAAGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS-3UTR CAA 90 bp AACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCACCTCCCGGTCCAAGTaGCAGAAGGTGATGCCAGCA +
Preference number: 5 (lower is better)
Translates to: NVGLNSHGSTYTWIFFRLTSRSK*QKVMPA
Trigger: TGCTGGCATCACCTTCTGCAACTTGGACCGGGAGGT...GAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CAA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCAGCATTCATGAATGTCTaGTCACACAGGTGGCACGTG +
Preference number: 5 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPAFMNV*SHRWHV
Trigger: CACGTGCCACCTGTGTGACAAGACATTCATGAATGC...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp GGGCTCCTAGTCAGGCACCTGTGGCCATCTACAGCAGGGCCCCTCACAGGTCAGAGTGTAGAGTTCTGCTaGGCGACATTTTTAAATTCA +
Preference number: 5 (lower is better)
Translates to: GLLVRHLWPSTAGPLTGQSVEFC*ATFLNS
Trigger: TGAATTTAAAAATGTCGCCAAGCAGAACTCTACACT...CTGACCTGTGAGGGGCCCTGCTGTAGATGGCCACAGGTGCCTGACTAGGAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp AAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCATTCCTGGAAGGAACTTTaGGGGGCTGTAGAGACACAC +
Preference number: 5 (lower is better)
Translates to: KLSRITQAGIDGLSYAPHSWKEL*GAVETH
Trigger: GTGTGTCTCTACAGCCCCCAAAAGTTCCTTCCAGGA...ATGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp CGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTCCTACCACAGGGTTAGTGTaGGGGATTCTAAATTCTCCC +
Preference number: 5 (lower is better)
Translates to: RGFSSDSATRETARATPPTTGLV*GILNSP
Trigger: GGGAGAATTTAGAATCCCCAACACTAACCCTGTGGT...AGGAGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CAA 90 bp ACCCCGAAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTACAGCCTTTGGCACCTaGTGGATCCCTTCCACCTTC +
Preference number: 5 (lower is better)
Translates to: TPKQRGVEQPWVHLYVDFTAFGT*WIPSTF
Trigger: GAAGGTGGAAGGGATCCACAAGGTGCCAAAGGCTGT...AAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTTCGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS TCA 90 bp GTGTTGGGGATTCTAAATTCTCCCTGTATTTCAGCAGGGCTTGTCTaGACCCGACTCAGCTCCACAGCTTGCGTCTGTCTCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: VLGILNSPCISAGLV*TRLSSTACVCLFCF
Trigger: GAAGCAGAAGAGACAGACGCAAGCTGTGGAGCTGAGTCGGGTTCAGACAAGCCCTGCTGAAATACAGGGAGAATTTAGAATCCCCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CAA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGGCAATGATCCTAGCTaGTTCCTGCAGCTGGGCACG +
Preference number: 5 (lower is better)
Translates to: DEIISIPCTASLQEDDLLGNDPS*FLQLGT
Trigger: CGTGCCCAGCTGCAGGAACAAGCTAGGATCATTGCC...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp ACCCCGAAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTGTATTTCAGCAGGGCTaGTCTGAACCCGACTCAGCT +
Preference number: 5 (lower is better)
Translates to: TPKQRGVEQPWVHLYVDFVFQQG*SEPDSA
Trigger: AGCTGAGTCGGGTTCAGACAAGCCCTGCTGAAATAC...AAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTTCGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CAA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTGGGTCCACTTTAGCTaGGCCCGTAGCTCTTCTAAC +
Preference number: 5 (lower is better)
Translates to: RDEIISIPCTASLQEDDLWVHFS*ARSSSN
Trigger: GTTAGAAGAGCTACGGGCCAAGCTAAAGTGGACCCA...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp AAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGTGGGTCCACTTTAGCTaGGCCCGTAGCTCTTCTAAC +
Preference number: 5 (lower is better)
Translates to: KQRGVEQPWVHLYVDFLPWVHFS*ARSSSN
Trigger: GTTAGAAGAGCTACGGGCCAAGCTAAAGTGGACCCA...CGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CAA 90 bp GAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGGTTACTTCTCTGGGAGCTTaGAGCGAGACAAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: EIISIPCTASLQEDDLLVTSLGA*SETRAW
Trigger: CCAAGCCCTTGTCTCGCTCAAAGCTCCCAGAGAAGT...AACCAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp GAAACTCTCCAGGATCACCCAGGCTGGGATAGATGGCCTCTCATATGCTCCCCACAAGAGGATGATCTCTaGGTTGTTTGTGAAGACAAG +
Preference number: 5 (lower is better)
Translates to: ETLQDHPGWDRWPLICSPQEDDL*VVCEDK
Trigger: CTTGTCTTCACAAACAACCAAGAGATCATCCTCTTG...TGGGGAGCATATGAGAGGCCATCTATCCCAGCCTGGGTGATCCTGGAGAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp TTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGAGTCAAGAGGAGAACTaGAGGGAGCCAAGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: LNSHGSTYTWIFFRLCHPSQEEN*REPSFQ
Trigger: TTGGAAACTTGGCTCCCTCAAGTTCTCCTCTTGACT...CGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CAA 90 bp GAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGATGTTTGAAATACAGTaGACCCCGAAACAACGTGGG +
Preference number: 5 (lower is better)
Translates to: EQPWVHLYVDFLPTLPPVMFEIQ*TPKQRG
Trigger: CCCACGTTGTTTCGGGGTCAACTGTATTTCAAACAT...CACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS TCA 90 bp GTCTGTCTCTTCTGCTTCCTCAAGAATGCAGTCAAGAGGAGAACTTaGGGGAGCCAAGTTTCCAAGGTGGCTGCCAGGCAATCATTTACA +
Preference number: 5 (lower is better)
Translates to: VCLFCFLKNAVKRRT*GSQVSKVAARQSFT
Trigger: TGTAAATGATTGCCTGGCAGCCACCTTGGAAACTTGGCTCCCTCAAGTTCTCCTCTTGACTGCATTCTTGAGGAAGCAGAAGAGACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CAA 90 bp AGGGATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCGAATCGAGATTCCCTTaGCATCCTTCCTTATCCCCA +
Preference number: 5 (lower is better)
Translates to: RDEIISIPCTASLQEDDLESRFP*HPSLSP
Trigger: TGGGGATAAGGAAGGATGCAAAGGGAATCTCGATTC...GAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS-3UTR CAA 90 bp CGAAACAACGTGGGGTTGAACAGCCATGGGTCCACTTATACGTGGATTTTCTTCGAATCGAGATTCCCTTaGCATCCTTCCTTATCCCCA +
Preference number: 5 (lower is better)
Translates to: RNNVGLNSHGSTYTWIFFESRFP*HPSLSP
Trigger: TGGGGATAAGGAAGGATGCAAAGGGAATCTCGATTC...GAAGAAAATCCACGTATAAGTGGACCCATGGCTGTTCAACCCCACGTTGTTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS CCA 90 bp TACAGATATTCACACAAATCAGCATTCCCTTCACAAGGGCTCTCCTaGGGGCTCAGCCCTTGCATAGAAAAAGCAATTCCATGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: YRYSHKSAFPSQGLS*GLSPCIEKAIPWKN
Trigger: GTTCTTCCATGGAATTGCTTTTTCTATGCAAGGGCTGAGCCCCCAGGAGAGCCCTTGTGAAGGGAATGCTGATTTGTGTGAATATCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473850.1
CDS-3UTR CAA 90 bp ATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCCCTAAGTTTGGTCCACTCTaGCTCTTTCCATTTATCAAA +
Preference number: 5 (lower is better)
Translates to: IRGFSSDSATRETARATPKFGPL*LFPFIK
Trigger: TTTGATAAATGGAAAGAGCAAGAGTGGACCAAACTT...AGGGGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS-3UTR CAA 90 bp CTTATACGTGGATTTTCTTCCGACTCTGCCACCCGTGAGACAGCAAGAGCAACCAGTGTAGAGTTCTGCTaGGCGACATTTTTAAATTCA +
Preference number: 5 (lower is better)
Translates to: LIRGFSSDSATRETARATSVEFC*ATFLNS
Trigger: TGAATTTAAAAATGTCGCCAAGCAGAACTCTACACT...GGTTGCTCTTGCTGTCTCACGGGTGGCAGAGTCGGAAGAAAATCCACGTATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS GCA 90 bp CACTTAAATTCTGCTATACTCAAAATCCCGAGCTCTCCTGACTGCTaGCCCATTTCTTCCTCAGTCTGGAATACACTGATGAGAATGAGA +
Preference number: 5 (lower is better)
Translates to: HLNSAILKIPSSPDC*PISSSVWNTLMRMR
Trigger: TCTCATTCTCATCAGTGTATTCCAGACTGAGGAAGAAATGGGGCAGCAGTCAGGAGAGCTCGGGATTTTGAGTATAGCAGAATTTAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473850.1
CDS-3UTR CAA 90 bp GATGAGATCATATCCATTCCCTGCACTGCTTCTCTCCAAGAGGATGATCTCTTGAAGTTTGGTCCACTCTaGCTCTTTCCATTTATCAAA +
Preference number: 5 (lower is better)
Translates to: DEIISIPCTASLQEDDLLKFGPL*LFPFIK
Trigger: TTTGATAAATGGAAAGAGCAAGAGTGGACCAAACTT...CAAGAGATCATCCTCTTGGAGAGAAGCAGTGCAGGGAATGGATATGATCTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS GCA 72 bp CGCAGTCCGGGCGCTCTCTGCGGCGGAGGCAGAGCCTaGCCGGCCCACTCCAGTGCCGCCAACCTGCGGGAC +
Preference number: 6 (lower is better)
Translates to: RSPGALCGGGRA*PAHSSAANLRD
Trigger: GTCCCGCAGGTTGGCGGCACTGGAGTGGGCCGGGCAGGCTCTGCCTCCGCCGCAGAGAGCGCCCGGACTGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000467030.5
ENST00000492010.1
CDS GCA 72 bp CTGCGGCGGAGGCAGAGCCTGCCCGGCCCACTCCAGTaGCGCCAACCTGCGGGACCGCGGACAGAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: LRRRQSLPGPLQ*RQPAGPRTESS
Trigger: GGAGCTCTCTGTCCGCGGTCCCGCAGGTTGGCGGCACTGGAGTGGGCCGGGCAGGCTCTGCCTCCGCCGCAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000467030.5
ENST00000492010.1
CDS GCA 72 bp GATGCTTCCCCAGCCCCACGCAGTCCGGGCGCTCTCTaGGGCGGAGGCAGAGCCTGCCCGGCCCACTCCAGT +
Preference number: 6 (lower is better)
Translates to: DASPAPRSPGAL*GGGRACPAHSS
Trigger: ACTGGAGTGGGCCGGGCAGGCTCTGCCTCCGCCGCAGAGAGCGCCCGGACTGCGTGGGGCTGGGGAAGCATC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000467030.5
ENST00000492010.1
CDS GCA 72 bp GGTTCCCGGAATGCTCACCGCCCGCCGTTCCCGGGATaGTTCCCCAGCCCCACGCAGTCCGGGCGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: GSRNAHRPPFPG*FPSPTQSGRSL
Trigger: CAGAGAGCGCCCGGACTGCGTGGGGCTGGGGAAGCATCCCGGGAACGGCGGGCGGTGAGCATTCCGGGAACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000492010.1
CDS GCA 72 bp AGCTCCACAGCTTGCGTCCGCCCGCCGTTCCCGGGATaGTTCCCCAGCCCCACGCAGTCCGGGCGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: SSTACVRPPFPG*FPSPTQSGRSL
Trigger: CAGAGAGCGCCCGGACTGCGTGGGGCTGGGGAAGCATCCCGGGAACGGCGGGCGGACGCAAGCTGTGGAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467030.5
CDS CCA 72 bp TCCTGGAGCCGGGGACGGCGGGAAGACGTCTCGAGGTaGCGGCTCCCATACTCGCCCCACGTCCCGCCTCCA +
Preference number: 6 (lower is better)
Translates to: SWSRGRREDVSR*RLPYSPHVPPP
Trigger: TGGAGGCGGGACGTGGGGCGAGTATGGGAGCCGCCACCTCGAGACGTCTTCCCGCCGTCCCCGGCTCCAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000492010.1
CDS CCA 72 bp CCTCGGTGCGTCGGTCAGCTCGTGGCTTGGGGTCTCTaGTGCCTCCAGCTCCTACTACAGCCGCCCCGCCCC +
Preference number: 6 (lower is better)
Translates to: PRCVGQLVAWGL*CLQLLLQPPRP
Trigger: GGGGCGGGGCGGCTGTAGTAGGAGCTGGAGGCACCAGAGACCCCAAGCCACGAGCTGACCGACGCACCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492010.1
CDS TCA 72 bp TCTTGCGACGCCGGCGGCTCTCCTCCCGCACACCCTTaGGCTCGTCAGCCTGGCGTCCCAGCTCCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: SCDAGGSPPAHP*ARQPGVPAPAD
Trigger: GTCAGCAGGAGCTGGGACGCCAGGCTGACGAGCTCAAGGGTGTGCGGGAGGAGAGCCGCCGGCGTCGCAAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS GCA 72 bp CCACCGCCCCAGACAGCCCAGAGATGGTTCCCGGAATaGTCACCGCCCGCCGTTCCCGGGATGCTTCCCCAG +
Preference number: 6 (lower is better)
Translates to: PPPQTAQRWFPE*SPPAVPGMLPQ
Trigger: CTGGGGAAGCATCCCGGGAACGGCGGGCGGTGAGCATTCCGGGAACCATCTCTGGGCTGTCTGGGGCGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000492010.1
CDS GCA 72 bp GCCAACCTGCGGGACCGCGGACAGAGAGCTCCTCGGTaGGTCGGTCAGCTCGTGGCTTGGGGTCTCTGGTGC +
Preference number: 6 (lower is better)
Translates to: ANLRDRGQRAPR*VGQLVAWGLWC
Trigger: GCACCAGAGACCCCAAGCCACGAGCTGACCGACGCACCGAGGAGCTCTCTGTCCGCGGTCCCGCAGGTTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492010.1
CDS GCA 72 bp GGCTCCCATACTCGCCCCACGTCCCGCCTCCAGACTTaGTCCACCGCCCCAGACAGCCCAGAGATGGTTCCC +
Preference number: 6 (lower is better)
Translates to: GSHTRPTSRLQT*STAPDSPEMVP
Trigger: GGGAACCATCTCTGGGCTGTCTGGGGCGGTGGAGCAAGTCTGGAGGCGGGACGTGGGGCGAGTATGGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000492010.1
CDS GCA 72 bp AGGCGCAGCACCTTGAGCAGTGCCGGGTCCACAGGCTaGCCACAGCGGCTGCACACCTCCCGGTCCAAGTTG +
Preference number: 6 (lower is better)
Translates to: RRSTLSSAGSTG*PQRLHTSRSKL
Trigger: CAACTTGGACCGGGAGGTGTGCAGCCGCTGTGGGCAGCCTGTGGACCCGGCACTGCTCAAGGTGCTGCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS CAA 72 bp CGGCTCCCATACTCGCCCCACGTCCCGCCTCCAGACTaGCTCCACCGCCCCAGACAGCCCAGAGATGGTTCC +
Preference number: 6 (lower is better)
Translates to: RLPYSPHVPPPD*LHRPRQPRDGS
Trigger: GGAACCATCTCTGGGCTGTCTGGGGCGGTGGAGCAAGTCTGGAGGCGGGACGTGGGGCGAGTATGGGAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000492010.1
CDS CAA 90 bp TCGAGGTGGCGGCTCCCATACTCGCCCCACGTCCCGCCTCCAGACTaGCTCCACCGCCCCAGACAGCCCAGAGATGGTTCCCGGAATGCT +
Preference number: 6 (lower is better)
Translates to: SRWRLPYSPHVPPPD*LHRPRQPRDGSRNA
Trigger: AGCATTCCGGGAACCATCTCTGGGCTGTCTGGGGCGGTGGAGCAAGTCTGGAGGCGGGACGTGGGGCGAGTATGGGAGCCGCCACCTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000492010.1
CDS GCA 72 bp AATGATGAGCTGCGCCAGGCGCAGCACCTTGAGCAGTaGCGGGTCCACAGGCTGCCCACAGCGGCTGCACAC +
Preference number: 6 (lower is better)
Translates to: NDELRQAQHLEQ*RVHRLPTAAAH
Trigger: GTGTGCAGCCGCTGTGGGCAGCCTGTGGACCCGGCACTGCTCAAGGTGCTGCGCCTGGCGCAGCTCATCATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS CCA 72 bp GCTGGAGCCATGGCTGCCATGGCTCTGACGAGTTGGTaGGGGTGGCTCTGCCGGTGTGGATGGCAAGGCCAC +
Preference number: 6 (lower is better)
Translates to: AGAMAAMALTSW*GWLCRCGWQGH
Trigger: GTGGCCTTGCCATCCACACCGGCAGAGCCACCCCCACCAACTCGTCAGAGCCATGGCAGCCATGGCTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS CAA 90 bp CAGTGCAGCAGGTACTCAATGATGAGCTGCGCCAGGCGCAGCACCTaGAGCAGTGCCGGGTCCACAGGCTGCCCACAGCGGCTGCACACC +
Preference number: 6 (lower is better)
Translates to: QCSRYSMMSCARRST*SSAGSTGCPQRLHT
Trigger: GGTGTGCAGCCGCTGTGGGCAGCCTGTGGACCCGGCACTGCTCAAGGTGCTGCGCCTGGCGCAGCTCATCATTGAGTACCTGCTGCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS CAA 90 bp ACACCTGGGTCAGGCTGGAGCCATGGCTGCCATGGCTCTGACGAGTaGGTGGGGGTGGCTCTGCCGGTGTGGATGGCAAGGCCACCTGCA +
Preference number: 6 (lower is better)
Translates to: TPGSGWSHGCHGSDE*VGVALPVWMARPPA
Trigger: TGCAGGTGGCCTTGCCATCCACACCGGCAGAGCCACCCCCACCAACTCGTCAGAGCCATGGCAGCCATGGCTCCAGCCTGACCCAGGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS TCA 72 bp GGGTGCCTGTCTGCATTAGCAGCTGCTGCAGGGTGCTaGTCATCTTGCGACGCCGGCGGCTCTCCTCCCGCA +
Preference number: 6 (lower is better)
Translates to: GCLSALAAAAGC*SSCDAGGSPPA
Trigger: TGCGGGAGGAGAGCCGCCGGCGTCGCAAGATGATCAGCACCCTGCAGCAGCTGCTAATGCAGACAGGCACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS CCA 72 bp CAGAGAGCTCCTCGGTGCGTCGGTCAGCTCGTGGCTTaGGGTCTCTGGTGCCTCCAGCTCCTACTACAGCCG +
Preference number: 6 (lower is better)
Translates to: QRAPRCVGQLVA*GLWCLQLLLQP
Trigger: CGGCTGTAGTAGGAGCTGGAGGCACCAGAGACCCCAAGCCACGAGCTGACCGACGCACCGAGGAGCTCTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492010.1
CDS CCA 72 bp GCGGACAGAGAGCTCCTCGGTGCGTCGGTCAGCTCGTaGCTTGGGGTCTCTGGTGCCTCCAGCTCCTACTAC +
Preference number: 6 (lower is better)
Translates to: ADRELLGASVSS*LGVSGASSSYY
Trigger: GTAGTAGGAGCTGGAGGCACCAGAGACCCCAAGCCACGAGCTGACCGACGCACCGAGGAGCTCTCTGTCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492010.1
CDS CCA 72 bp GGCTGGTCTGCAGCCGTGCCTCCAGCTGGGCAACACTaGCACTCAGGCAATCCTGGCAGTGCAGCAGGTACT +
Preference number: 6 (lower is better)
Translates to: GWSAAVPPAGQH*HSGNPGSAAGT
Trigger: AGTACCTGCTGCACTGCCAGGATTGCCTGAGTGCCAGTGTTGCCCAGCTGGAGGCACGGCTGCAGACCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS CCA 72 bp GACTGCACCAGTGTTCCTGAGCCCTGGCCAGGGGGCTaGGCATTCTCCTCCGAGGTCTCTGTGTCAGACCAG +
Preference number: 6 (lower is better)
Translates to: DCTSVPEPWPGG*AFSSEVSVSDQ
Trigger: CTGGTCTGACACAGAGACCTCGGAGGAGAATGCCCAGCCCCCTGGCCAGGGCTCAGGAACACTGGTGCAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000486487.1
CDS CAA 90 bp TGGGTGCCTGTCTGCATTAGCAGCTGCTGCAGGGTGCTGATCATCTaGCGACGCCGGCGGCTCTCCTCCCGCACACCCTTGAGCTCGTCA +
Preference number: 6 (lower is better)
Translates to: WVPVCISSCCRVLII*RRRRLSSRTPLSSS
Trigger: TGACGAGCTCAAGGGTGTGCGGGAGGAGAGCCGCCGGCGTCGCAAGATGATCAGCACCCTGCAGCAGCTGCTAATGCAGACAGGCACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS GCA 72 bp CAATCCTGGCAGTGCAGCAGGTACTCAATGATGAGCTaGGCCAGGCGCAGCACCTTGAGCAGTGCCGGGTCC +
Preference number: 6 (lower is better)
Translates to: QSWQCSRYSMMS*ARRSTLSSAGS
Trigger: GGACCCGGCACTGCTCAAGGTGCTGCGCCTGGCGCAGCTCATCATTGAGTACCTGCTGCACTGCCAGGATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS CAA 90 bp GGGTCCACAGGCTGCCCACAGCGGCTGCACACCTCCCGGTCCAAGTaGCAGAAGGTGATGCCAGCAATATTCTCCTGCAGAGTGGCCACA +
Preference number: 6 (lower is better)
Translates to: GSTGCPQRLHTSRSK*QKVMPAIFSCRVAT
Trigger: TGTGGCCACTCTGCAGGAGAATATTGCTGGCATCACCTTCTGCAACTTGGACCGGGAGGTGTGCAGCCGCTGTGGGCAGCCTGTGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS GCA 72 bp AGCTGGGCAACACTGGCACTCAGGCAATCCTGGCAGTaGAGCAGGTACTCAATGATGAGCTGCGCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: SWATLALRQSWQ*SRYSMMSCARR
Trigger: GCGCCTGGCGCAGCTCATCATTGAGTACCTGCTGCACTGCCAGGATTGCCTGAGTGCCAGTGTTGCCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS GCA 72 bp GTCTTTGGCTGGGCCTCTCTGGTGACCAGTGTGCTCTaGTGGCTTTTGACTGAAGGCTGCCCGTCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: VFGWASLVTSVL*WLLTEGCPSGW
Trigger: CCAGCCAGACGGGCAGCCTTCAGTCAAAAGCCAGCAGAGCACACTGGTCACCAGAGAGGCCCAGCCAAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS CCA 72 bp TCCTGGGAGGCAATGATCCTAGCTTGTTCCTGCAGCTaGGCACGGAGGGTGCTGATCTGGCACTGGGACTGG +
Preference number: 6 (lower is better)
Translates to: SWEAMILACSCS*ARRVLIWHWDW
Trigger: CCAGTCCCAGTGCCAGATCAGCACCCTCCGTGCCCAGCTGCAGGAACAAGCTAGGATCATTGCCTCCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS CAA 72 bp CATCCTTGGGCCGGGGCACCATCCTGGAAGGAACTTTaGGGGGCTGTAGAGACACACGCTGCACACGGTCTC +
Preference number: 6 (lower is better)
Translates to: HPWAGAPSWKEL*GAVETHAAHGL
Trigger: GAGACCGTGTGCAGCGTGTGTCTCTACAGCCCCCAAAAGTTCCTTCCAGGATGGTGCCCCGGCCCAAGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS CAA 90 bp AGTCCCAGTCATCCTTGGGCCGGGGCACCATCCTGGAAGGAACTTTaGGGGGCTGTAGAGACACACGCTGCACACGGTCTCCCTCTGAGT +
Preference number: 6 (lower is better)
Translates to: SPSHPWAGAPSWKEL*GAVETHAAHGLPLS
Trigger: ACTCAGAGGGAGACCGTGTGCAGCGTGTGTCTCTACAGCCCCCAAAAGTTCCTTCCAGGATGGTGCCCCGGCCCAAGGATGACTGGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS GCA 72 bp ATCTCCTCCTGGGAGGCAATGATCCTAGCTTGTTCCTaGAGCTGGGCACGGAGGGTGCTGATCTGGCACTGG +
Preference number: 6 (lower is better)
Translates to: ISSWEAMILACS*SWARRVLIWHW
Trigger: CCAGTGCCAGATCAGCACCCTCCGTGCCCAGCTGCAGGAACAAGCTAGGATCATTGCCTCCCAGGAGGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS CCA 72 bp CTCTGCTGGCTTTTGACTGAAGGCTGCCCGTCTGGCTaGGACACCACAGCGCCATTCTCCTGTCTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: LCWLLTEGCPSG*DTTAPFSCLSF
Trigger: GAAGGAGAGACAGGAGAATGGCGCTGTGGTGTCCCAGCCAGACGGGCAGCCTTCAGTCAAAAGCCAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS CAA 72 bp GGCTGCCCACAGCGGCTGCACACCTCCCGGTCCAAGTaGCAGAAGGTGATGCCAGCAATATTCTCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: GCPQRLHTSRSK*QKVMPAIFSCR
Trigger: TCTGCAGGAGAATATTGCTGGCATCACCTTCTGCAACTTGGACCGGGAGGTGTGCAGCCGCTGTGGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS CAA 72 bp CACTCCTCTGACTCCTCATCTCGCAGTGATCCCAGCTaGGACTCCATCACACTGTGGGACTGCAGTGCCCGC +
Preference number: 6 (lower is better)
Translates to: HSSDSSSRSDPS*DSITLWDCSAR
Trigger: GCGGGCACTGCAGTCCCACAGTGTGATGGAGTCCAAGCTGGGATCACTGCGAGATGAGGAGTCAGAGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000473850.1
ENST00000488595.1
CDS CAA 90 bp CCAGCAGGCTTCTTTGCTGGAGCTTCTAGCTGCTTCTCCAGGTTTTaGACCATCGACTGCACCAGTGTTCCTGAGCCCTGGCCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: PAGFFAGASSCFSRF*TIDCTSVPEPWPGG
Trigger: GCCCCCTGGCCAGGGCTCAGGAACACTGGTGCAGTCGATGGTCAAAAACCTGGAGAAGCAGCTAGAAGCTCCAGCAAAGAAGCCTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000486487.1
CDS CAA 90 bp AGACAAGGACTGGATCATCTCCTCCTGGGAGGCAATGATCCTAGCTaGTTCCTGCAGCTGGGCACGGAGGGTGCTGATCTGGCACTGGGA +
Preference number: 6 (lower is better)
Translates to: RQGLDHLLLGGNDPS*FLQLGTEGADLALG
Trigger: TCCCAGTGCCAGATCAGCACCCTCCGTGCCCAGCTGCAGGAACAAGCTAGGATCATTGCCTCCCAGGAGGAGATGATCCAGTCCTTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS GCA 72 bp TCCAAGTTGCAGAAGGTGATGCCAGCAATATTCTCCTaGAGAGTGGCCACATCCAGTTCCCGGGCCACGCGG +
Preference number: 6 (lower is better)
Translates to: SKLQKVMPAIFS*RVATSSSRATR
Trigger: CCGCGTGGCCCGGGAACTGGATGTGGCCACTCTGCAGGAGAATATTGCTGGCATCACCTTCTGCAACTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS CCA 72 bp ACTCCTCTGACTCCTCATCTCGCAGTGATCCCAGCTTaGACTCCATCACACTGTGGGACTGCAGTGCCCGCA +
Preference number: 6 (lower is better)
Translates to: TPLTPHLAVIPA*TPSHCGTAVPA
Trigger: TGCGGGCACTGCAGTCCCACAGTGTGATGGAGTCCAAGCTGGGATCACTGCGAGATGAGGAGTCAGAGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000473850.1
ENST00000488595.1
CDS CAA 72 bp CTCTGGGCTTCCAGCTCCCCTTGGGTCCACTTTAGCTaGGCCCGTAGCTCTTCTAACACCTCTTCCACTGGC +
Preference number: 6 (lower is better)
Translates to: LWASSSPWVHFS*ARSSSNTSSTG
Trigger: GCCAGTGGAAGAGGTGTTAGAAGAGCTACGGGCCAAGCTAAAGTGGACCCAAGGGGAGCTGGAAGCCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS CAA 72 bp CTGGATCATCTCCTCCTGGGAGGCAATGATCCTAGCTaGTTCCTGCAGCTGGGCACGGAGGGTGCTGATCTG +
Preference number: 6 (lower is better)
Translates to: LDHLLLGGNDPS*FLQLGTEGADL
Trigger: CAGATCAGCACCCTCCGTGCCCAGCTGCAGGAACAAGCTAGGATCATTGCCTCCCAGGAGGAGATGATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS TCA 72 bp AGCGGCTGCACACCTCCCGGTCCAAGTTGCAGAAGGTaGTGCCAGCAATATTCTCCTGCAGAGTGGCCACAT +
Preference number: 6 (lower is better)
Translates to: SGCTPPGPSCRR*CQQYSPAEWPH
Trigger: ATGTGGCCACTCTGCAGGAGAATATTGCTGGCATCACCTTCTGCAACTTGGACCGGGAGGTGTGCAGCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS GCA 72 bp GAAGTGCTTCAGCAAAGTGGGGTTACGCCTCAGAGCTaGCAGCACCTTGTGCTGTTCATCCTGGGAGTCCTC +
Preference number: 6 (lower is better)
Translates to: EVLQQSGVTPQS*QHLVLFILGVL
Trigger: GAGGACTCCCAGGATGAACAGCACAAGGTGCTGGCAGCTCTGAGGCGTAACCCCACTTTGCTGAAGCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000488595.1
CDS CCA 72 bp TGTTTTCCACCTTCTGCCACGCCTGCATGCCTGCGCTaGATGTGGCCCCGGAGAAAGGTGGCATTCATGAAT +
Preference number: 6 (lower is better)
Translates to: CFPPSATPACLR*MWPRRKVAFMN
Trigger: ATTCATGAATGCCACCTTTCTCCGGGGCCACATCCAGCGCAGGCATGCAGGCGTGGCAGAAGGTGGAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS CCA 72 bp TCTGGGCTTCCAGCTCCCCTTGGGTCCACTTTAGCTTaGCCCGTAGCTCTTCTAACACCTCTTCCACTGGCT +
Preference number: 6 (lower is better)
Translates to: SGLPAPLGSTLA*PVALLTPLPLA
Trigger: AGCCAGTGGAAGAGGTGTTAGAAGAGCTACGGGCCAAGCTAAAGTGGACCCAAGGGGAGCTGGAAGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000490472.1
CDS CCA 72 bp GTCACTCTCATCTTCAGAAAGCTGAGGCTTCCTTCCTaGTGTGGCAGCCCTCTGTGGCCCAGCATTGGGCAT +
Preference number: 6 (lower is better)
Translates to: VTLIFRKLRLPS*CGSPLWPSIGH
Trigger: ATGCCCAATGCTGGGCCACAGAGGGCTGCCACACCAGGAAGGAAGCCTCAGCTTTCTGAAGATGAGAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS CCA 72 bp TCTAAGCATCCTACATCCTACCTGAGGCTTCCTTCCTaGTGTGGCAGCCCTCTGTGGCCCAGCATTGGGCAT +
Preference number: 6 (lower is better)
Translates to: SKHPTSYLRLPS*CGSPLWPSIGH
Trigger: ATGCCCAATGCTGGGCCACAGAGGGCTGCCACACCAGGAAGGAAGCCTCAGGTAGGATGTAGGATGCTTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486487.1
CDS CAA 90 bp AAGTGCTTCAGCAAAGTGGGGTTACGCCTCAGAGCTGCCAGCACCTaGTGCTGTTCATCCTGGGAGTCCTCCATCTCTTCCTCTGGAGAG +
Preference number: 6 (lower is better)
Translates to: KCFSKVGLRLRAAST*CCSSWESSISSSGE
Trigger: CTCTCCAGAGGAAGAGATGGAGGACTCCCAGGATGAACAGCACAAGGTGCTGGCAGCTCTGAGGCGTAACCCCACTTTGCTGAAGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000488595.1
CDS TCA 72 bp CGAGCTTCTCTTCCAGGGTGTCCTCCAGGATTGGTCTaGAGTGCTTCAGCAAAGTGGGGTTACGCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: RASLPGCPPGLV*SASAKWGYASE
Trigger: CTCTGAGGCGTAACCCCACTTTGCTGAAGCACTTCAGACCAATCCTGGAGGACACCCTGGAAGAGAAGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000488595.1
CDS TCA 72 bp GCTCCCGCTGGACTCTCAGCAGGGATTCCAGGTGTCTaGGAGTCTGAATCGAGATTCCCTTTGCATCCTTCC +
Preference number: 6 (lower is better)
Translates to: APAGLSAGIPGV*ESESRFPLHPS
Trigger: GGAAGGATGCAAAGGGAATCTCGATTCAGACTCTCAGACACCTGGAATCCCTGCTGAGAGTCCAGCGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS TCA 72 bp GCTCTGTGGACCAGTGCCAAACTTCTCTGGGAGCTTTaGGCGAGACAAGGGCTTGGGTTTCTCTCTCTGGTC +
Preference number: 6 (lower is better)
Translates to: ALWTSAKLLWEL*ARQGLGFLSLV
Trigger: GACCAGAGAGAGAAACCCAAGCCCTTGTCTCGCTCAAAGCTCCCAGAGAAGTTTGGCACTGGTCCACAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327532.7
CDS GCA 72 bp AAAGTGGGGTTACGCCTCAGAGCTGCCAGCACCTTGTaGTGTTCATCCTGGGAGTCCTCCATCTCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: KVGLRLRAASTL*CSSWESSISSS
Trigger: AGAGGAAGAGATGGAGGACTCCCAGGATGAACAGCACAAGGTGCTGGCAGCTCTGAGGCGTAACCCCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000488595.1
CDS GCA 72 bp TTCTCTTCCAGGGTGTCCTCCAGGATTGGTCTGAAGTaGTTCAGCAAAGTGGGGTTACGCCTCAGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: FSSRVSSRIGLK*FSKVGLRLRAA
Trigger: GGCAGCTCTGAGGCGTAACCCCACTTTGCTGAAGCACTTCAGACCAATCCTGGAGGACACCCTGGAAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000488595.1
CDS TCA 72 bp TCTTTGCTGGAGCTTCTAGCTGCTTCTCCAGGTTTTTaGCCATCGACTGCACCAGTGTTCCTGAGCCCTGGC +
Preference number: 6 (lower is better)
Translates to: SLLELLAASPGF*PSTAPVFLSPG
Trigger: GCCAGGGCTCAGGAACACTGGTGCAGTCGATGGTCAAAAACCTGGAGAAGCAGCTAGAAGCTCCAGCAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000486487.1
CDS TCA 72 bp ATTCTAAATTCTCCCTGTATTTCAGCAGGGCTTGTCTaGACCCGACTCAGCTCCACAGCTTGCGTCCGCCCG +
Preference number: 6 (lower is better)
Translates to: ILNSPCISAGLV*TRLSSTACVRP
Trigger: CGGGCGGACGCAAGCTGTGGAGCTGAGTCGGGTTCAGACAAGCCCTGCTGAAATACAGGGAGAATTTAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467030.5
CDS GCA 72 bp CTCAGACTCAGAAATTCAGAAAACTTCCGGGCCTTCTaGTCCCGCTGGACTCTCAGCAGGGATTCCAGGTGT +
Preference number: 6 (lower is better)
Translates to: LRLRNSENFRAF*SRWTLSRDSRC
Trigger: ACACCTGGAATCCCTGCTGAGAGTCCAGCGGGAGCAGAAGGCCCGGAAGTTTTCTGAATTTCTGAGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS GCA 72 bp TCCCAGCTTGGACTCCATCACACTGTGGGACTGCAGTaGCCGCAGTTTCTGAAAAGGCCAGGGCATAGTTTT +
Preference number: 6 (lower is better)
Translates to: SQLGLHHTVGLQ*PQFLKRPGHSF
Trigger: AAAACTATGCCCTGGCCTTTTCAGAAACTGCGGGCACTGCAGTCCCACAGTGTGATGGAGTCCAAGCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473850.1
CDS GCA 72 bp GTCTTTGGCTGGGCCTCTCTGGTGACCAGTGTGCTCTaGTGGCTTTTGACTTCCTTATCCCCATGCTTTCGA +
Preference number: 6 (lower is better)
Translates to: VFGWASLVTSVL*WLLTSLSPCFR
Trigger: TCGAAAGCATGGGGATAAGGAAGTCAAAAGCCAGCAGAGCACACTGGTCACCAGAGAGGCCCAGCCAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488595.1
CDS CCA 72 bp TCTCGCAGTGATCCCAGCTTGGACTCCATCACACTGTaGGACTGCAGTGCCCGCAGTTTCTCTTCTAGTGTA +
Preference number: 6 (lower is better)
Translates to: SRSDPSLDSITL*DCSARSFSSSV
Trigger: TACACTAGAAGAGAAACTGCGGGCACTGCAGTCCCACAGTGTGATGGAGTCCAAGCTGGGATCACTGCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000488595.1
CDS CCA 72 bp AGAAATTCAGAAAACTTCCGGGCCTTCTGCTCCCGCTaGACTCTCAGCAGGGATTCCAGGTGTCTGAGAGTC +
Preference number: 6 (lower is better)
Translates to: RNSENFRAFCSR*TLSRDSRCLRV
Trigger: GACTCTCAGACACCTGGAATCCCTGCTGAGAGTCCAGCGGGAGCAGAAGGCCCGGAAGTTTTCTGAATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327532.7
ENST00000469243.5
CDS TCA 72 bp ATTCTAAATTCTCCCTGTATTTCAGCAGGGCTTGTCTaGACCCGACTCAGCTCCACAGCTTGCGTCCGTGGG +
Preference number: 6 (lower is better)
Translates to: ILNSPCISAGLV*TRLSSTACVRG
Trigger: CCCACGGACGCAAGCTGTGGAGCTGAGTCGGGTTCAGACAAGCCCTGCTGAAATACAGGGAGAATTTAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492010.1
CDS GCA 72 bp AGTGATCCCAGCTTGGACTCCATCACACTGTGGGACTaGAGTGCCCGCAGTTTCTCTTCTAGTGTAGAGTTC +
Preference number: 6 (lower is better)
Translates to: SDPSLDSITLWD*SARSFSSSVEF
Trigger: GAACTCTACACTAGAAGAGAAACTGCGGGCACTGCAGTCCCACAGTGTGATGGAGTCCAAGCTGGGATCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327532.7
ENST00000469243.5
ENST00000488595.1
CDS CAA 90 bp CGTCTGTCTCTTCTGCTTCCTCAAGAATGCAGTCAAGAGGAGAACTaGAGGGAGCCAAGTTTCCAAGGTGGCTGCCAGGCAATCATTTAC +
Preference number: 6 (lower is better)
Translates to: RLSLLLPQECSQEEN*REPSFQGGCQAIIY
Trigger: GTAAATGATTGCCTGGCAGCCACCTTGGAAACTTGGCTCCCTCAAGTTCTCCTCTTGACTGCATTCTTGAGGAAGCAGAAGAGACAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS TCA 72 bp ATTCTAAATTCTCCCTGTATTTCAGCAGGGCTTGTCTaGACCCGACTCAGCTCCACAGCTTGCGTCTGTCTC +
Preference number: 6 (lower is better)
Translates to: ILNSPCISAGLV*TRLSSTACVCL
Trigger: GAGACAGACGCAAGCTGTGGAGCTGAGTCGGGTTCAGACAAGCCCTGCTGAAATACAGGGAGAATTTAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469243.5
CDS GCA 72 bp TCTGCTATACTCAAAATCCCGAGCTCTCCTGACTGCTaGCCCATTTCTTCCTCAGTCTGGAATACACTGATG +
Preference number: 6 (lower is better)
Translates to: SAILKIPSSPDC*PISSSVWNTLM
Trigger: CATCAGTGTATTCCAGACTGAGGAAGAAATGGGGCAGCAGTCAGGAGAGCTCGGGATTTTGAGTATAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473850.1
CDS GCA 72 bp AATTCTGCTATACTCAAAATCCCGAGCTCTCCTGACTaGTGCCCCATTTCTTCCTCAGTCTGGAATACACTG +
Preference number: 6 (lower is better)
Translates to: NSAILKIPSSPD*CPISSSVWNTL
Trigger: CAGTGTATTCCAGACTGAGGAAGAAATGGGGCAGCAGTCAGGAGAGCTCGGGATTTTGAGTATAGCAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473850.1
CDS TCA 72 bp CTTAAATTCTGCTATACTCAAAATCCCGAGCTCTCCTaGCTGCTGCCCCATTTCTTCCTCAGTCTGGAATAC +
Preference number: 6 (lower is better)
Translates to: LKFCYTQNPELS*LLPHFFLSLEY
Trigger: GTATTCCAGACTGAGGAAGAAATGGGGCAGCAGTCAGGAGAGCTCGGGATTTTGAGTATAGCAGAATTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473850.1