RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DZIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000134874

Ensembl transcript IDs: ENST00000347108.7, ENST00000361156.7, ENST00000361396.6, ENST00000376829.7, ENST00000466027.1, ENST00000466569.1, ENST00000479518.1, ENST00000485031.5

Found 721 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGCCTGTCATGTGGCACATCCATGTTAAGGGGCTGAGGCGTCCCTaGCACGGAATGCAGAGCCCTGAGCTAGGGCATCAGCAGAAGCTG +
Preference number: 1 (lower is better)
Translates to: LPVMWHIHVKGLRRP*HGMQSPELGHQQKL
Trigger: CAGCTTCTGCTGATGCCCTAGCTCAGGGCTCTGCATTCCGTGCCAGGGACGCCTCAGCCCCTTAACATGGATGTGCCACATGACAGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR GCA 90 bp ACTGCACTGGCATGGTGTGCAGCCTCTAGCTCAGACCTGGTGAGCTaGAGCTCTTCCTTCAATACGACGATCTCACTCCGGAGCTTCTCA +
Preference number: 1 (lower is better)
Translates to: TALAWCAASSSDLVS*SSSFNTTISLRSFS
Trigger: TGAGAAGCTCCGGAGTGAGATCGTCGTATTGAAGGAAGAGCTGCAGCTCACCAGGTCTGAGCTAGAGGCTGCACACCATGCCAGTGCAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR CCA 90 bp GCTCCAGGAAGGGCTAATGGGGCCAATATATTATTGCCTGTCATGTaGCACATCCATGTTAAGGGGCTGAGGCGTCCCTGGCACGGAATG +
Preference number: 1 (lower is better)
Translates to: APGRANGANILLPVM*HIHVKGLRRPWHGM
Trigger: CATTCCGTGCCAGGGACGCCTCAGCCCCTTAACATGGATGTGCCACATGACAGGCAATAATATATTGGCCCCATTAGCCCTTCCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR TCA 90 bp GTTAAGGACATCCCAAGCCCAAGTGGTACGTGCCTCACTCAGAACTaGCGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAACCTGTTTA +
Preference number: 1 (lower is better)
Translates to: VKDIPSPSGTCLTQN*RAEFYLGVSSRTCL
Trigger: TAAACAGGTTCTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTACCACTTGGGCTTGGGATGTCCTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR CCA 90 bp GTTTTCTGCATTTCATATTCCTTGGAGAATCTGACTGCACTGGCATaGTGTGCAGCCTCTAGCTCAGACCTGGTGAGCTGCAGCTCTTCC +
Preference number: 1 (lower is better)
Translates to: VFCISYSLENLTALA*CAASSSDLVSCSSS
Trigger: GGAAGAGCTGCAGCTCACCAGGTCTGAGCTAGAGGCTGCACACCATGCCAGTGCAGTCAGATTCTCCAAGGAATATGAAATGCAGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR TCA 90 bp AAATTTTGGTTTCTTACATGTGCCTGTCATGACTGTAATTCATTATaGCTGCTCCAGGAAGGGCTAATGGGGCCAATATATTATTGCCTG +
Preference number: 1 (lower is better)
Translates to: KFWFLTCACHDCNSL*LLQEGLMGPIYYCL
Trigger: CAGGCAATAATATATTGGCCCCATTAGCCCTTCCTGGAGCAGTCATAATGAATTACAGTCATGACAGGCACATGTAAGAAACCAAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR CCA 90 bp ACTGAGGAGCCAATTAAAACCTGTTTATGCCTAGTGTTCCATTATTaGAACACTAAGCATGTGGGAGTTATTTATATCCTACTGCTCAAG +
Preference number: 1 (lower is better)
Translates to: TEEPIKTCLCLVFHY*NTKHVGVIYILLLK
Trigger: CTTGAGCAGTAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCATAAACAGGTTTTAATTGGCTCCTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR TCA 90 bp GAAGTCTTAAACACCTTTACATGCTTCGAAATACTGTTGATGATCTaGTTTTCAATACTGTATTGGGTGCCATTAAAGAGACCATTGTTC +
Preference number: 1 (lower is better)
Translates to: EVLNTFTCFEILLMI*FSILYWVPLKRPLF
Trigger: GAACAATGGTCTCTTTAATGGCACCCAATACAGTATTGAAAATCAGATCATCAACAGTATTTCGAAGCATGTAAAGGTGTTTAAGACTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGGCAGGAAAATCGCTTaGATCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQGRKIA*IWEAEV
Trigger: AACCTCCGCCTCCCAGATTCAAGCGATTTTCCTGCC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGGAGGGGTGGAGTCTTaGTATATTGCCCACGCTGGT +
Preference number: 2 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQGGVES*YIAHAG
Trigger: ACCAGCGTGGGCAATATAGCAAGACTCCACCCCTCC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTGGGGTGTGGAGGGGTaGAGTCTTGCTATATTGCCC +
Preference number: 2 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQWGVEG*SLAILP
Trigger: GGGCAATATAGCAAGACTCCACCCCTCCACACCCCA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGAACAAAGTGGCACATaGGCCATCTTAGGCTTGGTG +
Preference number: 2 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQEQSGT*AILGLV
Trigger: CACCAAGCCTAAGATGGCCCATGTGCCACTTTGTTC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TTGGTTCCAGTATGTGCGACGAGAATGCCTGTTCATGCACCATTGGCAGACTTGCAAAGTGTGCAGGGCTaGGGCATTCATAGGCACAGC +
Preference number: 2 (lower is better)
Translates to: LVPVCATRMPVHAPLADLQSVQG*GIHRHS
Trigger: GCTGTGCCTATGAATGCCCCAGCCCTGCACACTTTG...CAAGTCTGCCAATGGTGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR CAA 90 bp TTCATTATGACTGCTCCAGGAAGGGCTAATGGGGCCAATATATTATaGCCTGTCATGTGGCACATCCATGTTAAGGGGCTGAGGCGTCCC +
Preference number: 2 (lower is better)
Translates to: FIMTAPGRANGANIL*PVMWHIHVKGLRRP
Trigger: GGGACGCCTCAGCCCCTTAACATGGATGTGCCACATGACAGGCAATAATATATTGGCCCCATTAGCCCTTCCTGGAGCAGTCATAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTGCCCACGCTGGTCTTaGACTCCTGTGCTCAAGTTA +
Preference number: 2 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGCPRWS*TPVLKL
Trigger: TAACTTGAGCACAGGAGTTCAAGACCAGCGTGGGCA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGTGAGTATATCTGCATaGAATGGCCCCTATAGGAAG +
Preference number: 2 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQVSISA*NGPYRK
Trigger: CTTCCTATAGGGGCCATTTCATGCAGATATACTCAC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTGCTCCAGGGATTTCTaGAAAAAGACACAGGCTTCT +
Preference number: 2 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQCSRDF*KKTQAS
Trigger: AGAAGCCTGTGTCTTTTTTCAGAAATCCCTGGAGCA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTTCCCCAAGCTCTTCTaGTCAGGAATGAAAACATGG +
Preference number: 2 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQFPKLF*SGMKTW
Trigger: CCATGTTTTCATTCCTGAGCAGAAGAGCTTGGGGAA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCAGAAACACATTAGTTaGGCATCAGTAAGGGGCAAC +
Preference number: 2 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQQKHIS*ASVRGN
Trigger: GTTGCCCCTTACTGATGCCCAACTAATGTGTTTCTG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGGCAGGAAAATCGCTTaGATCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: RATVITVHTHLSCPVSLTGRKIA*IWEAEV
Trigger: AACCTCCGCCTCCCAGATTCAAGCGATTTTCCTGCC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAGAAACTGTCCGATATaGATCACAACGTGGGTGAAT +
Preference number: 2 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQRNCPI*ITTWVN
Trigger: ATTCACCCACGTTGTGATTCATATCGGACAGTTTCT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGGTCTTGAACTCCTGTaGTCAAGTTATCCTCCCACC +
Preference number: 2 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGGLELL*SSYPPT
Trigger: GGTGGGAGGATAACTTGAGCACAGGAGTTCAAGACC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGGAGGGGTGGAGTCTTaGTATATTGCCCACGCTGGT +
Preference number: 2 (lower is better)
Translates to: RATVITVHTHLSCPVSLTGGVES*YIAHAG
Trigger: ACCAGCGTGGGCAATATAGCAAGACTCCACCCCTCC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGTAACATGCTTACAGTaGCTCAAAGCTGAATGTGAC +
Preference number: 2 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQVTCLQ*LKAECD
Trigger: GTCACATTCAGCTTTGAGCCACTGTAAGCATGTTAC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGGCAACATAAAGGAATaGTTCCCCTCAAAAACGAAC +
Preference number: 2 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQGNIKE*FPSKTN
Trigger: GTTCGTTTTTGAGGGGAACCATTCCTTTATGTTGCC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TCTATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTCTCTGACTGCACTGGCATaGTGTGCAGCCTCTAGCTCA +
Preference number: 2 (lower is better)
Translates to: SIIEVRSFSICDRSRPFSLTALA*CAASSS
Trigger: TGAGCTAGAGGCTGCACACCATGCCAGTGCAGTCAG...AGAGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTAGACAGCGGATCATTTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: RATVITVHTHLSCPVSLTRQRII*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAATGATCCGCTGTCT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGAATCAGTCTCTGTGTTaGTGTGGGAAACACGGTAAG +
Preference number: 2 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGNQSLC*CGKHGK
Trigger: CTTACCGTGTTTCCCACAGCAACACAGAGACTGATT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGGTCTTGAACTCCTGTaGTCAAGTTATCCTCCCACC +
Preference number: 2 (lower is better)
Translates to: RATVITVHTHLSCPVSLTGLELL*SSYPPT
Trigger: GGTGGGAGGATAACTTGAGCACAGGAGTTCAAGACC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR GCA 90 bp TCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTCTTTCTTCAGACCTGGTGAGCTaGAGCTCTTCCTTCAATACG +
Preference number: 2 (lower is better)
Translates to: SLRFEVSLYVTGADPSLSSDLVS*SSSFNT
Trigger: CGTATTGAAGGAAGAGCTGCAGCTCACCAGGTCTGA...AGAAAGAGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAATACTGCTGGCTTCTaGAATAATCTTCTGACATGT +
Preference number: 2 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQNTAGF*NNLLTC
Trigger: ACATGTCAGAAGATTATTCCAGAAGCCAGCAGTATT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTCAGGAATGAAAACATaGCAGACACAAAACATGGAA +
Preference number: 2 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQSGMKT*QTQNME
Trigger: TTCCATGTTTTGTGTCTGCCATGTTTTCATTCCTGA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCATTTAATAGTAACATaGTTACAGTGGCTCAAAGCT +
Preference number: 2 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQHLIVT*LQWLKA
Trigger: AGCTTTGAGCCACTGTAAGCATGTTACTATTAAATG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTTTTCAATACTGTATTaGGTGCCATTAAAGAGACCA +
Preference number: 2 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQFSILY*VPLKRP
Trigger: TGGTCTCTTTAATGGCACCCAATACAGTATTGAAAA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGTAACATGCTTACAGTaGCTCAAAGCTGAATGTGAC +
Preference number: 2 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGVTCLQ*LKAECD
Trigger: GTCACATTCAGCTTTGAGCCACTGTAAGCATGTTAC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TGTTCATGCACCATTGGCAGACTTGATTTAGTTTCCAAAGTGTGCAGGGCTGGGAGCTGCATGACATTATaGAAATCCTGGGGATATGGA +
Preference number: 2 (lower is better)
Translates to: CSCTIGRLDLVSKVCRAGSCMTL*KSWGYG
Trigger: TCCATATCCCCAGGATTTCCATAATGTCATGCAGCT...CCCAGCCCTGCACACTTTGGAAACTAAATCAAGTCTGCCAATGGTGCATGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGGCAGGAAAATCGCTTaGATCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILGRKIA*IWEAEV
Trigger: AACCTCCGCCTCCCAGATTCAAGCGATTTTCCTGCC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp TCTATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTCTGTCCATTTGCTTTCCTaGCTATCAAGAAGCTGCATG +
Preference number: 2 (lower is better)
Translates to: SIIEVRSFSICDRSRPFSVHLLS*LSRSCM
Trigger: CATGCAGCTTCTTGATAGTCAGGAAAGCAAATGGAC...AGAGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGGAGGGGTGGAGTCTTaGTATATTGCCCACGCTGGT +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILGGVES*YIAHAG
Trigger: ACCAGCGTGGGCAATATAGCAAGACTCCACCCCTCC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTTCCCCAAGCTCTTCTaGTCAGGAATGAAAACATGG +
Preference number: 2 (lower is better)
Translates to: RATVITVHTHLSCPVSLTFPKLF*SGMKTW
Trigger: CCATGTTTTCATTCCTGAGCAGAAGAGCTTGGGGAA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGGACAGAATGTCATATaGCATAGCAATCAAGGCCAG +
Preference number: 2 (lower is better)
Translates to: RATVITVHTHLSCPVSLTGQNVI*HSNQGQ
Trigger: CTGGCCTTGATTGCTATGCCATATGACATTCTGTCC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGATGGAGGCAAATTACTaGAACACTGTGATACTGAAA +
Preference number: 2 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGMEANY*NTVILK
Trigger: TTTCAGTATCACAGTGTTTCAGTAATTTGCCTCCAT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATGCCCACGCTGGTCTTaGACTCCTGTGCTCAAGTTA +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILCPRWS*TPVLKL
Trigger: TAACTTGAGCACAGGAGTTCAAGACCAGCGTGGGCA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCTTAAAGTCTCCCCTTaGCACTTTGTACTTGTATGG +
Preference number: 2 (lower is better)
Translates to: RATVITVHTHLSCPVSLTLKVSP*HFVLVW
Trigger: CCATACAAGTACAAAGTGTCAAGGGGAGACTTTAAG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAGACAGCGGATCATTTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILRQRII*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAATGATCCGCTGTCT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTAGAAACTGTCCGATATaGATCACAACGTGGGTGAAT +
Preference number: 2 (lower is better)
Translates to: RATVITVHTHLSCPVSLTRNCPI*ITTWVN
Trigger: ATTCACCCACGTTGTGATTCATATCGGACAGTTTCT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATGCCTCACTCAGAACTaGCGGGCCGAGTTCTATCTA +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILCLTQN*RAEFYL
Trigger: TAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGTAACATGCTTACAGTaGCTCAAAGCTGAATGTGAC +
Preference number: 2 (lower is better)
Translates to: RATVITVHTHLSCPVSLTVTCLQ*LKAECD
Trigger: GTCACATTCAGCTTTGAGCCACTGTAAGCATGTTAC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGGCAACATAAAGGAATaGTTCCCCTCAAAAACGAAC +
Preference number: 2 (lower is better)
Translates to: RATVITVHTHLSCPVSLTGNIKE*FPSKTN
Trigger: GTTCGTTTTTGAGGGGAACCATTCCTTTATGTTGCC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACATCCCAAGCCCAAGTaGTACGTGCCTCACTCAGAA +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILHPKPK*YVPHSE
Trigger: TTCTGAGTGAGGCACGTACCACTTGGGCTTGGGATG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACAGCCACAGTCACAGTaGTGTAACAGAGGGCTTTAC +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILQPQSQ*CNRGLY
Trigger: GTAAAGCCCTCTGTTACATCACTGTGACTGTGGCTG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCATTTAATAGTAACATaGTTACAGTGGCTCAAAGCT +
Preference number: 2 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGHLIVT*LQWLKA
Trigger: AGCTTTGAGCCACTGTAAGCATGTTACTATTAAATG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTTTAGAGGGCAGGAATaGGCTACAAGTAAAAAGGAT +
Preference number: 2 (lower is better)
Translates to: RATVITVHTHLSCPVSLTFRGQE*ATSKKD
Trigger: ATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGAACAAAGTGGCACATaGGCCATCTTAGGCTTGGTG +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILEQSGT*AILGLV
Trigger: CACCAAGCCTAAGATGGCCCATGTGCCACTTTGTTC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCCAAACCAGACCAAGTaGTTCAATAAATATCTGCTG +
Preference number: 2 (lower is better)
Translates to: RATVITVHTHLSCPVSLTPNQTK*FNKYLL
Trigger: CAGCAGATATTTATTGAACCACTTGGTCTGGTTTGG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp AAGTTCTTCTATTGGTTCCAGTATGTGCGACGAGAATGCCTGTTCATGCACCATGAAATCCTGGGGATATaGAGAACGGTCTTCTTTAAA +
Preference number: 2 (lower is better)
Translates to: KFFYWFQYVRRECLFMHHEILGI*RTVFFK
Trigger: TTTAAAGAAGACCGTTCTCCATATCCCCAGGATTTC...ATGGTGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAATAGAAGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR-3UTR TCA 90 bp GAGAATGCCTGTTCATGCACCATTGGCAGACTTGATTTAGTTTCCAAAGTGTGCATCTGTGCATTTTTCTaGTACTATGCAGATGTACAC +
Preference number: 2 (lower is better)
Translates to: ENACSCTIGRLDLVSKVCICAFF*YYADVH
Trigger: GTGTACATCTGCATAGTATCAGAAAAATGCACAGAT...GCACACTTTGGAAACTAAATCAAGTCTGCCAATGGTGCATGAACAGGCATTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR-3UTR TCA 90 bp AAGTTCTTCTATTGGTTCCAGTATGTGCGACGAGAATGCCTGTTCATGCACCATTTCCTTTGGGTTCACTaGTACTGTTTAATGGATTAC +
Preference number: 2 (lower is better)
Translates to: KFFYWFQYVRRECLFMHHFLWVH*YCLMDY
Trigger: GTAATCCATTAAACAGTATCAGTGAACCCAAAGGAA...ATGGTGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAATAGAAGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTAATACTGCTGGCTTCTaGAATAATCTTCTGACATGT +
Preference number: 2 (lower is better)
Translates to: RATVITVHTHLSCPVSLTNTAGF*NNLLTC
Trigger: ACATGTCAGAAGATTATTCCAGAAGCCAGCAGTATT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCACTTTGTACTTGTATaGCTTCTGGCAACTTACTTA +
Preference number: 2 (lower is better)
Translates to: RATVITVHTHLSCPVSLTHFVLV*LLATYL
Trigger: TAAGTAAGTTGCCAGAAGCCATACAAGTACAAAGTG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGTGAGTATATCTGCATaGAATGGCCCCTATAGGAAG +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILVSISA*NGPYRK
Trigger: CTTCCTATAGGGGCCATTTCATGCAGATATACTCAC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAATCAGTCTCTGTGTTaGTGTGGGAAACACGGTAAG +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILNQSLC*CGKHGK
Trigger: CTTACCGTGTTTCCCACAGCAACACAGAGACTGATT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGGATCCCAGGGTGGGTaGAAACAGATAAAGATTTGT +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILGSQGG*KQIKIC
Trigger: ACAAATCTTTATCTGTTTCCACCCACCCTGGGATCC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGCCCCTATAGGAAGTTaGAAGGATTCTTTTAGAGGG +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILAPIGS*KDSFRG
Trigger: CCCTCTAAAAGAATCCTTCCAACTTCCTATAGGGGC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACAGAAACACATTAGTTaGGCATCAGTAAGGGGCAAC +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILQKHIS*ASVRGN
Trigger: GTTGCCCCTTACTGATGCCCAACTAATGTGTTTCTG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACTTAAAGTCTCCCCTTaGCACTTTGTACTTGTATGG +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILLKVSP*HFVLVW
Trigger: CCATACAAGTACAAAGTGTCAAGGGGAGACTTTAAG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAGAAACTGTCCGATATaGATCACAACGTGGGTGAAT +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILRNCPI*ITTWVN
Trigger: ATTCACCCACGTTGTGATTCATATCGGACAGTTTCT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATAATCAGTCTCTGTGTTaGTGTGGGAAACACGGTAAG +
Preference number: 2 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNNQSLC*CGKHGK
Trigger: CTTACCGTGTTTCCCACAGCAACACAGAGACTGATT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGTAACATGCTTACAGTaGCTCAAAGCTGAATGTGAC +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILVTCLQ*LKAECD
Trigger: GTCACATTCAGCTTTGAGCCACTGTAAGCATGTTAC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACTGTTTACGGCTAACTaGATAACTGAGAGACTTGTC +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILLFTAN*ITERLV
Trigger: GACAAGTCTCTCAGTTATCCAGTTAGCCGTAAACAG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR CAA 90 bp TCCTTTTCTTATAGAAAACATTGCTTGCATTTAGATCATCTATCATaGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCT +
Preference number: 2 (lower is better)
Translates to: SFSYRKHCLHLDHLS*RFEVSLYVTGADPS
Trigger: AGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGATAGATGATCTAAATGCAAGCAATGTTTTCTATAAGAAAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATTTAGAGGGCAGGAATaGGCTACAAGTAAAAAGGAT +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILFRGQE*ATSKKD
Trigger: ATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACCAAACCAGACCAAGTaGTTCAATAAATATCTGCTG +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILPNQTK*FNKYLL
Trigger: CAGCAGATATTTATTGAACCACTTGGTCTGGTTTGG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAATACTGCTGGCTTCTaGAATAATCTTCTGACATGT +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILNTAGF*NNLLTC
Trigger: ACATGTCAGAAGATTATTCCAGAAGCCAGCAGTATT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACACTTTGTACTTGTATaGCTTCTGGCAACTTACTTA +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILHFVLV*LLATYL
Trigger: TAAGTAAGTTGCCAGAAGCCATACAAGTACAAAGTG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATCAGGAATGAAAACATaGCAGACACAAAACATGGAA +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILSGMKT*QTQNME
Trigger: TTCCATGTTTTGTGTCTGCCATGTTTTCATTCCTGA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR CAA 90 bp GTCTCTGCCCTAGCTCTTCTATCCTTTTCTTATAGAAAACATTGCTaGCATTTAGATCATCTATCATTGAGGTTCGAAGTTTCTCTATAT +
Preference number: 2 (lower is better)
Translates to: VSALALLSFSYRKHC*HLDHLSLRFEVSLY
Trigger: ATATAGAGAAACTTCGAACCTCAATGATAGATGATCTAAATGCAAGCAATGTTTTCTATAAGAAAAGGATAGAAGAGCTAGGGCAGAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATATGGAGGCAAATTACTaGAACACTGTGATACTGAAA +
Preference number: 2 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNMEANY*NTVILK
Trigger: TTTCAGTATCACAGTGTTTCAGTAATTTGCCTCCAT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACATTTAATAGTAACATaGTTACAGTGGCTCAAAGCT +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILHLIVT*LQWLKA
Trigger: AGCTTTGAGCCACTGTAAGCATGTTACTATTAAATG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATAATACTGCTGGCTTCTaGAATAATCTTCTGACATGT +
Preference number: 2 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNNTAGF*NNLLTC
Trigger: ACATGTCAGAAGATTATTCCAGAAGCCAGCAGTATT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGAAGCACTAGAATCATaGAGGCAAATTACTGAAACA +
Preference number: 2 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNEALES*RQITET
Trigger: TGTTTCAGTAATTTGCCTCCATGATTCTAGTGCTTC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATTTTCAATACTGTATTaGGTGCCATTAAAGAGACCA +
Preference number: 2 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILFSILY*VPLKRP
Trigger: TGGTCTCTTTAATGGCACCCAATACAGTATTGAAAA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTTTTCAATACTGTATTaGGTGCCATTAAAGAGACCA +
Preference number: 2 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNFSILY*VPLKRP
Trigger: TGGTCTCTTTAATGGCACCCAATACAGTATTGAAAA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR TCA 72 bp GGGGCTGAGGCGTCCCTGGCACGGAATGCAGAGCCCTaGGCTAGGGCATCAGCAGAAGCTGAGATAGAGATA +
Preference number: 3 (lower is better)
Translates to: GAEASLARNAEP*ARASAEAEIEI
Trigger: TATCTCTATCTCAGCTTCTGCTGATGCCCTAGCTCAGGGCTCTGCATTCCGTGCCAGGGACGCCTCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR GCA 72 bp GCATGGTGTGCAGCCTCTAGCTCAGACCTGGTGAGCTaGAGCTCTTCCTTCAATACGACGATCTCACTCCGG +
Preference number: 3 (lower is better)
Translates to: AWCAASSSDLVS*SSSFNTTISLR
Trigger: CCGGAGTGAGATCGTCGTATTGAAGGAAGAGCTGCAGCTCACCAGGTCTGAGCTAGAGGCTGCACACCATGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAGGCAGGAAAATCGCTaGAATCTGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQRQENR*NLGGGG
Trigger: ACCTCCGCCTCCCAGATTCAAGCGATTTTCCTGCCT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR TCA 72 bp ATCCCAAGCCCAAGTGGTACGTGCCTCACTCAGAACTaGCGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGA +
Preference number: 3 (lower is better)
Translates to: IPSPSGTCLTQN*RAEFYLGVSSR
Trigger: TCTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTACCACTTGGGCTTGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGTCGAAACTAGGCCTTaGAACCAAGGCAGTCTAGGG +
Preference number: 3 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQVETRP*NQGSLG
Trigger: CCCTAGACTGCCTTGGTTCAAAGGCCTAGTTTCGAC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR CCA 72 bp AGGGCTAATGGGGCCAATATATTATTGCCTGTCATGTaGCACATCCATGTTAAGGGGCTGAGGCGTCCCTGG +
Preference number: 3 (lower is better)
Translates to: RANGANILLPVM*HIHVKGLRRPW
Trigger: CCAGGGACGCCTCAGCCCCTTAACATGGATGTGCCACATGACAGGCAATAATATATTGGCCCCATTAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTGGAGGGGTGGAGTCTaGCTATATTGCCCACGCTGG +
Preference number: 3 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGWRGGV*LYCPRW
Trigger: CCAGCGTGGGCAATATAGCAAGACTCCACCCCTCCA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAAGACAGCGGATCATTaGAGGTCAGGAGTTCGAGAC +
Preference number: 3 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQKTADH*RSGVRD
Trigger: GTCTCGAACTCCTGACCTCAAATGATCCGCTGTCTT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTCTCCCCTTGACACTTaGTACTTGTATGGCTTCTGG +
Preference number: 3 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQSPLDT*YLYGFW
Trigger: CCAGAAGCCATACAAGTACAAAGTGTCAAGGGGAGA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTTGCCCACGCTGGTCTaGAACTCCTGTGCTCAAGTT +
Preference number: 3 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGLPTLV*NSCAQV
Trigger: AACTTGAGCACAGGAGTTCAAGACCAGCGTGGGCAA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR TCA 72 bp CGACGAGAATGCCTGTTCATGCACCATTGGCAGACTTaGTTTAGTTTCCAAAGTGTGCAGGGCTGGGGCATT +
Preference number: 3 (lower is better)
Translates to: RRECLFMHHWQT*FSFQSVQGWGI
Trigger: AATGCCCCAGCCCTGCACACTTTGGAAACTAAATCAAGTCTGCCAATGGTGCATGAACAGGCATTCTCGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTTGCCCACGCTGGTCTaGAACTCCTGTGCTCAAGTT +
Preference number: 3 (lower is better)
Translates to: RATVITVHTHLSCPVSLTLPTLV*NSCAQV
Trigger: AACTTGAGCACAGGAGTTCAAGACCAGCGTGGGCAA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGTCGAAACTAGGCCTTaGAACCAAGGCAGTCTAGGG +
Preference number: 3 (lower is better)
Translates to: RATVITVHTHLSCPVSLTVETRP*NQGSLG
Trigger: CCCTAGACTGCCTTGGTTCAAAGGCCTAGTTTCGAC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGATTTTCAATACTGTATaGGGTGCCATTAAAGAGACC +
Preference number: 3 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQIFNTV*GAIKET
Trigger: GGTCTCTTTAATGGCACCCAATACAGTATTGAAAAT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTCTCCCCTTGACACTTaGTACTTGTATGGCTTCTGG +
Preference number: 3 (lower is better)
Translates to: RATVITVHTHLSCPVSLTSPLDT*YLYGFW
Trigger: CCAGAAGCCATACAAGTACAAAGTGTCAAGGGGAGA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR GCA 72 bp TCTTCCTCTGAAAGTTCTTCTATTGGTTCCAGTATGTaGGACGAGAATGCCTGTTCATGCACCATTGGCAGA +
Preference number: 3 (lower is better)
Translates to: SSSESSSIGSSM*DENACSCTIGR
Trigger: TCTGCCAATGGTGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAATAGAAGAACTTTCAGAGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR-3UTR CAA 90 bp TATTGGTTCCAGTATGTGCGACGAGAATGCCTGTTCATGCACCATTGGCAGACTGCTAAAGGATTTCCTTaGGGTTCACTGATACTGTTT +
Preference number: 3 (lower is better)
Translates to: YWFQYVRRECLFMHHWQTAKGFP*GSLILF
Trigger: AAACAGTATCAGTGAACCCAAAGGAAATCCTTTAGC...AGTCTGCCAATGGTGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGTCGAAACTAGGCCTTaGAACCAAGGCAGTCTAGGG +
Preference number: 3 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILVETRP*NQGSLG
Trigger: CCCTAGACTGCCTTGGTTCAAAGGCCTAGTTTCGAC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR TCA 72 bp AAACATGGAATAGAGACCTGGCTTAAAGTCTCCCCTTaGCACTTTGTACTTGTATGGCTTCTGGCAACTTAC +
Preference number: 3 (lower is better)
Translates to: KHGIETWLKVSP*HFVLVWLLATY
Trigger: GTAAGTTGCCAGAAGCCATACAAGTACAAAGTGTCAAGGGGAGACTTTAAGCCAGGTCTCTATTCCATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAAGACAGCGGATCATTaGAGGTCAGGAGTTCGAGAC +
Preference number: 3 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILKTADH*RSGVRD
Trigger: GTCTCGAACTCCTGACCTCAAATGATCCGCTGTCTT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR TCA 72 bp TTTCTTACATGTGCCTGTCATGACTGTAATTCATTATaGCTGCTCCAGGAAGGGCTAATGGGGCCAATATAT +
Preference number: 3 (lower is better)
Translates to: FLTCACHDCNSL*LLQEGLMGPIY
Trigger: ATATATTGGCCCCATTAGCCCTTCCTGGAGCAGTCATAATGAATTACAGTCATGACAGGCACATGTAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR GCA 72 bp GGAACACTAAGCATGTGGGAGTTATTTATATCCTACTaGTCAAGGTCATCGCCAAGGTGTGATTGGAAAAAT +
Preference number: 3 (lower is better)
Translates to: GTLSMWELFISY*SRSSPRCDWKN
Trigger: ATTTTTCCAATCACACCTTGGCGATGACCTTGAGCAGTAGGATATAAATAACTCCCACATGCTTAGTGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR GCA 72 bp TTGAAAAAGCAAAGCCACACCATTCTCTTTGATGTATaGAGAGAGTTACGTAGCAGGGGATGTTCTCTGATT +
Preference number: 3 (lower is better)
Translates to: LKKQSHTILFDV*RELRSRGCSLI
Trigger: AATCAGAGAACATCCCCTGCTACGTAACTCTCTGCATACATCAAAGAGAATGGTGTGGCTTTGCTTTTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR CCA 72 bp AAGAAGCTGCATGACATTATGGAAATCCTGGGGATATaGAGAACGGTCTTCTTTAAACTCGTGTGCATCTTT +
Preference number: 3 (lower is better)
Translates to: KKLHDIMEILGI*RTVFFKLVCIF
Trigger: AAAGATGCACACGAGTTTAAAGAAGACCGTTCTCCATATCCCCAGGATTTCCATAATGTCATGCAGCTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTATTTTCAATACTGTATaGGGTGCCATTAAAGAGACC +
Preference number: 3 (lower is better)
Translates to: RATVITVHTHLSCPVSLTIFNTV*GAIKET
Trigger: GGTCTCTTTAATGGCACCCAATACAGTATTGAAAAT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCCTAGGAGATACATATaGTTTTCATCCTGCATTTAC +
Preference number: 3 (lower is better)
Translates to: RATVITVHTHLSCPVSLTPRRYI*FSSCIY
Trigger: GTAAATGCAGGATGAAAACAATATGTATCTCCTAGG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR-3UTR CAA 90 bp GCTTTCCTGACTATCAAGAAGCTGCATGACATTATGGAAATCCTGGGGATATGGTTTAATGTGCCTATGTaGGACTTGATCTGCATATTG +
Preference number: 3 (lower is better)
Translates to: AFLTIKKLHDIMEILGIWFNVPM*DLICIL
Trigger: CAATATGCAGATCAAGTCCAACATAGGCACATTAAA...CCATATCCCCAGGATTTCCATAATGTCATGCAGCTTCTTGATAGTCAGGAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR TCA 72 bp ACTCGTGTGCATCTTTTAATGTGCCTATGTTGGACTTaGTCTGCATATTGGACTTCTGGATTTCTGACAGTT +
Preference number: 3 (lower is better)
Translates to: TRVHLLMCLCWT*SAYWTSGFLTV
Trigger: AACTGTCAGAAATCCAGAAGTCCAATATGCAGATCAAGTCCAACATAGGCACATTAAAAGATGCACACGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR TCA 72 bp TCTGTGCATTTTTCTGATACTATGCAGATGTACACATaGCTGAATGGATGTACATGTGTCTGTGAGTGTAGA +
Preference number: 3 (lower is better)
Translates to: SVHFSDTMQMYT*LNGCTCVCECR
Trigger: TCTACACTCACAGACACATGTACATCCATTCAGTCATGTGTACATCTGCATAGTATCAGAAAAATGCACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466569.1
3UTR CCA 72 bp CCAATTAAAACCTGTTTATGCCTAGTGTTCCATTATTaGAACACTAAGCATGTGGGAGTTATTTATATCCTA +
Preference number: 3 (lower is better)
Translates to: PIKTCLCLVFHY*NTKHVGVIYIL
Trigger: TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCATAAACAGGTTTTAATTGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAGCAAAGGGCGCGTCTaGCCGCGCAGGGTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQSKGRV*PRRVSV
Trigger: CACGCTGACCCTGCGCGGGCAGACGCGCCCTTTGCT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAGCCGCGGCCTGAACTaGAAGAAGGGCAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQSRGLN*KKGRGP
Trigger: GGGGCCCCTGCCCTTCTTCCAGTTCAGGCCGCGGCT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTCCGCTGCCTCAGCTTaGATAGGAGGAGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQSAASA*IGGAGR
Trigger: CCGCCCGGCTCCTCCTATGCAAGCTGAGGCAGCGGA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGGTCTTTACCCAGCCTaGGCCGCCTCCCGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGGLYPA*AASRAA
Trigger: GGCGGCCCGGGAGGCGGCCCAGGCTGGGTAAAGACC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGCCCCTCTGGGCCGCTaGCGAGCGGGTAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQAPLGR*RAGSRH
Trigger: ATGTCTACTACCCGCTCGCCAGCGGCCCAGAGGGGC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGACGTCGGGCCCCTCTaGGCCGCTGGCGAGCGGGTA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGDVGPL*AAGERV
Trigger: TACCCGCTCGCCAGCGGCCCAGAGGGGCCCGACGTC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GAGCTGCAGCTCTTCCTTCAATACGACGATCTCACTCCGGAGCTTCTCAATCTGAGCCGCGGCCTGAACTaGAAGAAGGGCAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ELQLFLQYDDLTPELLNLSRGLN*KKGRGP
Trigger: GGGGCCCCTGCCCTTCTTCCAGTTCAGGCCGCGGCT...CAGATTGAGAAGCTCCGGAGTGAGATCGTCGTATTGAAGGAAGAGCTGCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGGGTCCACCCCCGACTaGCAGTGTGGGCACTTCTCG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQGSTPD*QCGHFS
Trigger: CGAGAAGTGCCCACACTGCCAGTCGGGGGTGGACCC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGACTGCGCCAGACGGATaGGCTTCAGCAGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQTAPDG*ASAAPG
Trigger: ACCCGGTGCTGCTGAAGCTCATCCGTCTGGCGCAGT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCGCTCCTCCAGGGTGTaGAGCTGCGAGGTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQRSSRV*SCEVRN
Trigger: GTTCCTCACCTCGCAGCTGCACACCCTGGAGGAGCG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGCCTGGGGATGCGTATaGCCGGATGAGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQAWGCV*PDEVVV
Trigger: GACGACGACCTCATCCGGGCATACGCATCCCCAGGC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCGGCGGCCTAAGGTCTaGGCGTCCAGGACGTTGCTA +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQRRPKV*ASRTLL
Trigger: TAGCAACGTCCTGGACGCCCAGACCTTAGGCCGCCG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGCTCTTCCTTCAATACGACGATCTCACTCCGGAGCTTCTCAATCTGTGCATTTGACGTCGGGCCCCTCTaGGCCGCTGGCGAGCGGGTA +
Preference number: 4 (lower is better)
Translates to: SSSFNTTISLRSFSICAFDVGPL*AAGERV
Trigger: TACCCGCTCGCCAGCGGCCCAGAGGGGCCCGACGTC...AAATGCACAGATTGAGAAGCTCCGGAGTGAGATCGTCGTATTGAAGGAAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp GAGCTGCAGCTCTTCCTTCAATACGACGATCTCACTCCGGAGCTTCTCAATCTGGGGTCCACCCCCGACTaGCAGTGTGGGCACTTCTCG +
Preference number: 4 (lower is better)
Translates to: ELQLFLQYDDLTPELLNLGSTPD*QCGHFS
Trigger: CGAGAAGTGCCCACACTGCCAGTCGGGGGTGGACCC...CAGATTGAGAAGCTCCGGAGTGAGATCGTCGTATTGAAGGAAGAGCTGCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTGCTCGCCGTCGCAGTaGCTCAGGCGCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGCSPSQ*LRRSRS
Trigger: GGAGCGGCTGCGCCTGAGCCACTGCGACGGCGAGCA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGATGCGTATGCCCGGATaGGGTCGTCGTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQMRMPG*GRRPPA
Trigger: AGCAGGAGGACGACGACCTCATCCGGGCATACGCAT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAAGTGGGCCTGGGGATaGGTATGCCCGGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQKWAWG*VCPDEV
Trigger: GACCTCATCCGGGCATACGCATCCCCAGGCCCACTT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAGGCCGGCTCCTTCTTaGAGGGCGCAGGATGAAACG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQRPAPS*RAQDET
Trigger: CGTTTCATCCTGCGCCCTGCAAGAAGGAGCCGGCCT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGGTCTTTACCCAGCCTaGGCCGCCTCCCGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTGLYPA*AASRAA
Trigger: GGCGGCCCGGGAGGCGGCCCAGGCTGGGTAAAGACC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGACGTCGGGCCCCTCTaGGCCGCTGGCGAGCGGGTA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTDVGPL*AAGERV
Trigger: TACCCGCTCGCCAGCGGCCCAGAGGGGCCCGACGTC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGAGCCGCGGCCTGAACTaGAAGAAGGGCAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGSRGLN*KKGRGP
Trigger: GGGGCCCCTGCCCTTCTTCCAGTTCAGGCCGCGGCT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCGGAATGCAGAGCCCTaGGCTAGGGCATCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQRNAEP*ARASAE
Trigger: TTCTGCTGATGCCCTAGCTCAGGGCTCTGCATTCCG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGCCCCTCTGGGCCGCTaGCGAGCGGGTAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGAPLGR*RAGSRH
Trigger: ATGTCTACTACCCGCTCGCCAGCGGCCCAGAGGGGC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCCTTGTCCACGTCGATaGCGCTCAGCCGCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGPCPRR*RSAAAS
Trigger: ACTGGCGGCGGCTGAGCGCCATCGACGTGGACAAGG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGGGTCCACCCCCGACTaGCAGTGTGGGCACTTCTCG +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGGSTPD*QCGHFS
Trigger: CGAGAAGTGCCCACACTGCCAGTCGGGGGTGGACCC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTGCTCGCCGTCGCAGTaGCTCAGGCGCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTCSPSQ*LRRSRS
Trigger: GGAGCGGCTGCGCCTGAGCCACTGCGACGGCGAGCA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTCTTTCTTGCTCGCCGTCGCAGTaGCTCAGGCGCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SLRFEVSLYVTGADPSLSCSPSQ*LRRSRS
Trigger: GGAGCGGCTGCGCCTGAGCCACTGCGACGGCGAGCA...AGAAAGAGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGCTGCCCTTGTTTTGTaGTGGCGGCACAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQAALVL*WRHRKW
Trigger: CCACTTCCTGTGCCGCCACCACAAAACAAGGGCAGC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGGGCTGAGGCGTCCCTaGCACGGAATGCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGGLRRP*HGMQSP
Trigger: AGGGCTCTGCATTCCGTGCCAGGGACGCCTCAGCCC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGCGAGGCGGGTCGACTaGCGCCGCTCTAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTARRVD*RRSRAF
Trigger: GAAGGCCCTAGAGCGGCGCCAGTCGACCCGCCTCGC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCTGGAAGGGCATGCTTaGAAACCAATCCGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQLEGHA*KPIRCL
Trigger: GAGGCAGCGGATTGGTTTTCAAGCATGCCCTTCCAG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTGTGCAGCTGCGAGGTaGGGAACTCTTGTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQCAAAR*GTLVSA
Trigger: TGCACTCACAAGAGTTCCTCACCTCGCAGCTGCACA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCCCCCGCCTGCTTGGTaGGCAGCTTCTTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGPPPAW*AASCSA
Trigger: AGCAGAGCAAGAAGCTGCTCACCAAGCAGGCGGGGG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAGGGAGGGTGGGGGATaGAGGTCTGTTAGTAACCAG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQREGGG*RSVSNQ
Trigger: CTGGTTACTAACAGACCTTCATCCCCCACCCTCCCT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCCACCGGGGAATTCCTaGTTGGACCAGACATCAGGA +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQPPGNS*LDQTSG
Trigger: TCCTGATGTCTGGTCCAAGCAGGAATTCCCCGGTGG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTAGCAAAGGGCGCGTCTaGCCGCGCAGGGTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTSKGRV*PRRVSV
Trigger: CACGCTGACCCTGCGCGGGCAGACGCGCCCTTTGCT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGGGCGTCCAGGACGTTaGTATAGCAGCGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGGRPGR*YSSAQV
Trigger: GACCTGGGCGCTGCTATAGCAACGTCCTGGACGCCC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGCTGCAGCTCTTCCTTCAATACGACGATCTCACTCCGGAGCTTCTCAATCTGTAGCAGCTTCTTGCTCTaGTCGCCGTCGCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SCSSSFNTTISLRSFSICSSFLL*SPSQWL
Trigger: GAGCCACTGCGACGGCGAGCAGAGCAAGAAGCTGCT...ACAGATTGAGAAGCTCCGGAGTGAGATCGTCGTATTGAAGGAAGAGCTGCAGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGCCTGGGGATGCGTATaGCCGGATGAGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGAWGCV*PDEVVV
Trigger: GACGACGACCTCATCCGGGCATACGCATCCCCAGGC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGCCCAGGTCCGGACCTaGAGCAAAGGGCGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTAQVRT*SKGRVC
Trigger: GCAGACGCGCCCTTTGCTCCAGGTCCGGACCTGGGC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCGGCGGCCTAAGGTCTaGGCGTCCAGGACGTTGCTA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGRRPKV*ASRTLL
Trigger: TAGCAACGTCCTGGACGCCCAGACCTTAGGCCGCCG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTAGCCGCGGCCTGAACTaGAAGAAGGGCAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTSRGLN*KKGRGP
Trigger: GGGGCCCCTGCCCTTCTTCCAGTTCAGGCCGCGGCT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCAAAGTGTGCAGGGCTaGGGCATTCATAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQQSVQG*GIHRHS
Trigger: GCTGTGCCTATGAATGCCCCAGCCCTGCACACTTTG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347108.7
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTCTCCAGCCGCGGCCTaGACTGGAAGAAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTSPAAA*TGRRAG
Trigger: CCCTGCCCTTCTTCCAGTTCAGGCCGCGGCTGGAGA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTGCCCACGCTGGTCTTaGACTCCTGTGCTCAAGTTA +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQCPRWS*TPVLKL
Trigger: TAACTTGAGCACAGGAGTTCAAGACCAGCGTGGGCA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTCCATGTTAAGGGGCTaGGGCGTCCCTGGCACGGAA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGSMLRG*GVPGTE
Trigger: TTCCGTGCCAGGGACGCCTCAGCCCCTTAACATGGA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTCCGCTGCCTCAGCTTaGATAGGAGGAGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTSAASA*IGGAGR
Trigger: CCGCCCGGCTCCTCCTATGCAAGCTGAGGCAGCGGA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGAGCAGCTTCTTGCTCTaGTCGCCGTCGCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGSSFLL*SPSQWL
Trigger: GAGCCACTGCGACGGCGAGCAGAGCAAGAAGCTGCT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGCCTCGATCATCAGCTaGTGGGTGGAGATCATCTTC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQASIIS*WVEIIF
Trigger: GAAGATGATCTCCACCCAGCAGCTGATGATCGAGGC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGAAGTGGGCCTGGGGATaGGTATGCCCGGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGKWAWG*VCPDEV
Trigger: GACCTCATCCGGGCATACGCATCCCCAGGCCCACTT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTGTTCTTCCCGAAGCTaGCCTTGTTTTGTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQCSSRS*PCFVVA
Trigger: CGCCACCACAAAACAAGGGCAGCTTCGGGAAGAACA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGAGGCCGGCTCCTTCTTaGAGGGCGCAGGATGAAACG +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGRPAPS*RAQDET
Trigger: CGTTTCATCCTGCGCCCTGCAAGAAGGAGCCGGCCT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTTTCTATGGGTCTTCTaGGGGCCTCCAGTGGTTACC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQFLWVF*GPPVVT
Trigger: GGTAACCACTGGAGGCCCCCAGAAGACCCATAGAAA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGAACCCTTACAAACTTaGGTCGGGGCTGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQEPLQT*VGAAFW
Trigger: CCAGAATGCAGCCCCGACCCAAGTTTGTAAGGGTTC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GAGAATGCCTGTTCATGCACCATTGGCAGACTTGATTTAGTTTCCAAAGTGTGCGCCCCTCTGGGCCGCTaGCGAGCGGGTAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: ENACSCTIGRLDLVSKVCAPLGR*RAGSRH
Trigger: ATGTCTACTACCCGCTCGCCAGCGGCCCAGAGGGGC...GCACACTTTGGAAACTAAATCAAGTCTGCCAATGGTGCATGAACAGGCATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCCTTGTCCACGTCGATaGCGCTCAGCCGCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTPCPRR*RSAAAS
Trigger: ACTGGCGGCGGCTGAGCGCCATCGACGTGGACAAGG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GAGAATGCCTGTTCATGCACCATTGGCAGACTTGATTTAGTTTCCAAAGTGTGCCCTTGTCCACGTCGATaGCGCTCAGCCGCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: ENACSCTIGRLDLVSKVCPCPRR*RSAAAS
Trigger: ACTGGCGGCGGCTGAGCGCCATCGACGTGGACAAGG...GCACACTTTGGAAACTAAATCAAGTCTGCCAATGGTGCATGAACAGGCATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGGGCTGAGGCGTCCCTaGCACGGAATGCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTGLRRP*HGMQSP
Trigger: AGGGCTCTGCATTCCGTGCCAGGGACGCCTCAGCCC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTACTGCGCCAGACGGATaGGCTTCAGCAGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTTAPDG*ASAAPG
Trigger: ACCCGGTGCTGCTGAAGCTCATCCGTCTGGCGCAGT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TCTATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTCTACTGCGCCAGACGGATaGGCTTCAGCAGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: SIIEVRSFSICDRSRPFSTAPDG*ASAAPG
Trigger: ACCCGGTGCTGCTGAAGCTCATCCGTCTGGCGCAGT...AGAGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR TCA 90 bp ATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTCTTTCCCCCCGCCTGCTTGGTaGGCAGCTTCTTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: IIEVRSFSICDRSRPFSFPPPAW*AASCSA
Trigger: AGCAGAGCAAGAAGCTGCTCACCAAGCAGGCGGGGG...GAAAGAGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGATTCCTTGGAGAATCTaGCTGCACTGGCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQIPWRI*LHWHGV
Trigger: CACACCATGCCAGTGCAGTCAGATTCTCCAAGGAAT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCGCGCAGGGTCAGCGTaGACCCAGAACCCTTACAAA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGRAGSA*TQNPYK
Trigger: TTTGTAAGGGTTCTGGGTGCACGCTGACCCTGCGCG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGGGCGTCCAGGACGTTaGTATAGCAGCGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTGRPGR*YSSAQV
Trigger: GACCTGGGCGCTGCTATAGCAACGTCCTGGACGCCC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTTCATGATGTTCTCCTaGAGCGTCAGCACGTCCACA +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQFMMFS*SVSTST
Trigger: TGTGGACGTGCTGACGCTGCAGGAGAACATCATGAA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCGCTCCTCCAGGGTGTaGAGCTGCGAGGTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTRSSRV*SCEVRN
Trigger: GTTCCTCACCTCGCAGCTGCACACCCTGGAGGAGCG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTCAGACCTGGTGAGCTaGAGCTCTTCCTTCAATACG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQSDLVS*SSSFNT
Trigger: CGTATTGAAGGAAGAGCTGCAGCTCACCAGGTCTGA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTGCTCCTGGAGTCTCTaGCCTAGCTCTTCTATCCTT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQCSWSL*PSSSIL
Trigger: AAGGATAGAAGAGCTAGGGCAGAGACTCCAGGAGCA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGCCTGGGGATGCGTATaGCCGGATGAGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTAWGCV*PDEVVV
Trigger: GACGACGACCTCATCCGGGCATACGCATCCCCAGGC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGGTCTTTACCCAGCCTaGGCCGCCTCCCGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILGLYPA*AASRAA
Trigger: GGCGGCCCGGGAGGCGGCCCAGGCTGGGTAAAGACC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGACGTCGGGCCCCTCTaGGCCGCTGGCGAGCGGGTA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILDVGPL*AAGERV
Trigger: TACCCGCTCGCCAGCGGCCCAGAGGGGCCCGACGTC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTGGCGGCACAGGAAGTaGGCCTGGGGATGCGTATGC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTWRHRK*AWGCVC
Trigger: GCATACGCATCCCCAGGCCCACTTCCTGTGCCGCCA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCTGGAAGGGCATGCTTaGAAACCAATCCGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGLEGHA*KPIRCL
Trigger: GAGGCAGCGGATTGGTTTTCAAGCATGCCCTTCCAG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCTCCTGCTCCTCCTCTaGACTAAAAGGAGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGLLLLL*TKRRGR
Trigger: ACGACCCCTCCTTTTAGTTCAGAGGAGGAGCAGGAG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTATGCGTATGCCCGGATaGGGTCGTCGTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTMRMPG*GRRPPA
Trigger: AGCAGGAGGACGACGACCTCATCCGGGCATACGCAT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGGCAGGAAAATCGCTTaGATCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGGRKIA*IWEAEV
Trigger: AACCTCCGCCTCCCAGATTCAAGCGATTTTCCTGCC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGAGGGAGGGTGGGGGATaGAGGTCTGTTAGTAACCAG +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGREGGG*RSVSNQ
Trigger: CTGGTTACTAACAGACCTTCATCCCCCACCCTCCCT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTCCATGTTAAGGGGCTaGGGCGTCCCTGGCACGGAA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTSMLRG*GVPGTE
Trigger: TTCCGTGCCAGGGACGCCTCAGCCCCTTAACATGGA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTTGCAGGGCGCAGGATaGAACGTGTCTGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTLQGAG*NVSGLG
Trigger: GCCCAGACCAGACACGTTTCATCCTGCGCCCTGCAA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCCACCGGGGAATTCCTaGTTGGACCAGACATCAGGA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGPPGNS*LDQTSG
Trigger: TCCTGATGTCTGGTCCAAGCAGGAATTCCCCGGTGG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAGGAACTCTTGTGAGTaGAGCAAGTACTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQRNSCE*SKYSMV
Trigger: CACCATCGAGTACTTGCTGCACTCACAAGAGTTCCT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp CTTCAATACGACGATCTCACTCCGGAGCTTCTCAATCTGTGCATTTTTCTGATACGCTCCTCCAGGGTGTaGAGCTGCGAGGTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LQYDDLTPELLNLCIFLIRSSRV*SCEVRN
Trigger: GTTCCTCACCTCGCAGCTGCACACCCTGGAGGAGCG...TATCAGAAAAATGCACAGATTGAGAAGCTCCGGAGTGAGATCGTCGTATTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp TGCAGCTCTTCCTTCAATACGACGATCTCACTCCGGAGCTTCTCAATCTGTGCAGCCTCGATCATCAGCTaGTGGGTGGAGATCATCTTC +
Preference number: 4 (lower is better)
Translates to: CSSSFNTTISLRSFSICAASIIS*WVEIIF
Trigger: GAAGATGATCTCCACCCAGCAGCTGATGATCGAGGC...TGCACAGATTGAGAAGCTCCGGAGTGAGATCGTCGTATTGAAGGAAGAGCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGATAATCAGCTCATTCTaGTCCTGGAGTCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQIISSF*SWSLCP
Trigger: AGGGCAGAGACTCCAGGAGCAGAATGAGCTGATTAT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTATGTGCGACGAGAATaGCTGTTCATGCACCATTGG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQYVRRE*LFMHHW
Trigger: CCAATGGTGCATGAACAGGCATTCTCGTCGCACATA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGGAGGGGTGGAGTCTTaGTATATTGCCCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGGGVES*YIAHAG
Trigger: ACCAGCGTGGGCAATATAGCAAGACTCCACCCCTCC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTTAGTTTCCAAAGTGTaGAGGGCTGGGGCATTCACT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQLVSKV*RAGAFT
Trigger: AGTGAATGCCCCAGCCCTGCACACTTTGGAAACTAA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361156.7
ENST00000361396.6
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCGGGGAATTCCTGCTTaGACCAGACATCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQRGIPA*TRHQEF
Trigger: AAATTCCTGATGTCTGGTCCAAGCAGGAATTCCCCG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AAGTTCTTCTATTGGTTCCAGTATGTGCGACGAGAATGCCTGTTCATGCACCATCCCCGACTGGCAGTGTaGGCACTTCTCGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KFFYWFQYVRRECLFMHHPRLAV*ALLVFQ
Trigger: CTGGAAGACGAGAAGTGCCCACACTGCCAGTCGGGG...ATGGTGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAATAGAAGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTCGATCATCAGCTGCTaGGTGGAGATCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQSIISC*VEIIFF
Trigger: GAAGAAGATGATCTCCACCCAGCAGCTGATGATCGA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGGTAATAGTTGGCTTTaGCCTCGATCATCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQGNSWL*PRSSAA
Trigger: AGCAGCTGATGATCGAGGCCAAAGCCAACTATTACC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCTGACTGCACTGGCATaGTGTGCAGCCTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGLTALA*CAASSS
Trigger: TGAGCTAGAGGCTGCACACCATGCCAGTGCAGTCAG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCAAAGTGTGCAGGGCTaGGGCATTCATAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGQSVQG*GIHRHS
Trigger: GCTGTGCCTATGAATGCCCCAGCCCTGCACACTTTG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347108.7
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCACAGGAAGTGGGCCTaGGGATGCGTATGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTHRKWA*GCVCPD
Trigger: ATCCGGGCATACGCATCCCCAGGCCCACTTCCTGTG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTGGGGTGTGGAGGGGTaGAGTCTTGCTATATTGCCC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGWGVEG*SLAILP
Trigger: GGGCAATATAGCAAGACTCCACCCCTCCACACCCCA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCAGCTCTTCCTTCAATACGACGATCTCACTCCGGAGCTTCTCAATCTGTGCAGGTGAGGAACTCTTGTaGGTGCAGCAAGTACTCGAT +
Preference number: 4 (lower is better)
Translates to: CSSSFNTTISLRSFSICAGEELL*VQQVLD
Trigger: ATCGAGTACTTGCTGCACTCACAAGAGTTCCTCACC...TGCACAGATTGAGAAGCTCCGGAGTGAGATCGTCGTATTGAAGGAAGAGCTGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGGGTACTTCTCCAGTTaGAAGGGTATCCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQGYFSS*KGIHLR
Trigger: TCTCAAATGGATACCCTTTCAACTGGAGAAGTACCC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAGGGGTCGTAATAGTTaGAGACTTTCTGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQRGRNS*RLSGKR
Trigger: CCTTTTCCCAGAAAGTCTTCAACTATTACGACCCCT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGTGGAATTAGACATCTaGAGTGTCGCTCCAATCAGT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQVELDI*SVAPIS
Trigger: ACTGATTGGAGCGACACTTCAGATGTCTAATTCCAC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGAGACAGCGGATCATTTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGRQRII*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAATGATCCGCTGTCT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTGCCTCACTCAGAACTaGCGGGCCGAGTTCTATCTA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGCLTQN*RAEFYL
Trigger: TAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGGCATCAGCAGAAGCTaGGATAGAGATATTGGTCAT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQGISRS*DRDIGH
Trigger: ATGACCAATATCTCTATCTCAGCTTCTGCTGATGCC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCGGAATGCAGAGCCCTaGGCTAGGGCATCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTRNAEP*ARASAE
Trigger: TTCTGCTGATGCCCTAGCTCAGGGCTCTGCATTCCG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAGCATGGGGGCAATCTaGGAATATTCCTCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQSMGAI*EYSSKG
Trigger: ACCTTTTGAGGAATATTCTCAGATTGCCCCCATGCT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCGCGCAGGGTCAGCGTaGACCCAGAACCCTTACAAA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTRAGSA*TQNPYK
Trigger: TTTGTAAGGGTTCTGGGTGCACGCTGACCCTGCGCG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCTTGGAGAATCTGACTaGACTGGCATGGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGLGESD*TGMVCS
Trigger: GCTGCACACCATGCCAGTGCAGTCAGATTCTCCAAG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGAGAATGCCTGTTCATaGACCATTGGCAGACTTGAT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQENACS*TIGRLD
Trigger: ATCAAGTCTGCCAATGGTGCATGAACAGGCATTCTC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTTTAACGGCGACTCCTaGGGGCTTGGGAGAATCATC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGFNGDS*GLGRII
Trigger: GATGATTCTCCCAAGCCCGCAGGAGTCGCCGTTAAA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAATCAGTCTCTGTGTTaGTGTGGGAAACACGGTAAG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQNQSLC*CGKHGK
Trigger: CTTACCGTGTTTCCCACAGCAACACAGAGACTGATT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTTTCTATGGGTCTTCTaGGGGCCTCCAGTGGTTACC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGFLWVF*GPPVVT
Trigger: GGTAACCACTGGAGGCCCCCAGAAGACCCATAGAAA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGTCGGGGCTGCATTCTaGGCTTTGGAGAGGCTAAAA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGVGAAF*ALERLK
Trigger: TTTTAGCCTCTCCAAAGCCCAGAATGCAGCCCCGAC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGAACCCTTACAAACTTaGGTCGGGGCTGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGEPLQT*VGAAFW
Trigger: CCAGAATGCAGCCCCGACCCAAGTTTGTAAGGGTTC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGCCCAGGTCCGGACCTaGAGCAAAGGGCGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILAQVRT*SKGRVC
Trigger: GCAGACGCGCCCTTTGCTCCAGGTCCGGACCTGGGC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAGCCGCGGCCTGAACTaGAAGAAGGGCAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILSRGLN*KKGRGP
Trigger: GGGGCCCCTGCCCTTCTTCCAGTTCAGGCCGCGGCT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTGCTCGCCGTCGCAGTaGCTCAGGCGCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNCSPSQ*LRRSRS
Trigger: GGAGCGGCTGCGCCTGAGCCACTGCGACGGCGAGCA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTCATCAGCTGCTGGGTaGAGATCATCTTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGSSAAG*RSSSSG
Trigger: GCCGGAAGAAGATGATCTCCACCCAGCAGCTGATGA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GAGCTGCAGCTCTTCCTTCAATACGACGATCTCACTCCGGAGCTTCTCAATCTGGGCACTGGTAATAGTTaGCTTTGGCCTCGATCATCA +
Preference number: 4 (lower is better)
Translates to: ELQLFLQYDDLTPELLNLGTGNS*LWPRSS
Trigger: TGATGATCGAGGCCAAAGCCAACTATTACCAGTGCC...CAGATTGAGAAGCTCCGGAGTGAGATCGTCGTATTGAAGGAAGAGCTGCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCACAGCTGGAGCAGCTaGCTGAGATTCAAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGHSWSS*LRFKSL
Trigger: CAGGCTTTTGAATCTCAGCCAGCTGCTCCAGCTGTG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347108.7
ENST00000376829.7
CDS-3UTR CCA 90 bp AGCTCTTCCTTCAATACGACGATCTCACTCCGGAGCTTCTCAATCTGTGCATTTCAAAGTGTGCAGGGCTaGGGCATTCATAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: SSSFNTTISLRSFSICAFQSVQG*GIHRHS
Trigger: GCTGTGCCTATGAATGCCCCAGCCCTGCACACTTTG...AAATGCACAGATTGAGAAGCTCCGGAGTGAGATCGTCGTATTGAAGGAAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGCTGCCCTTGTTTTGTaGTGGCGGCACAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTAALVL*WRHRKW
Trigger: CCACTTCCTGTGCCGCCACCACAAAACAAGGGCAGC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAAGTCCTTCTCCCTTTaGCCCCTTAGGATTAAATGC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQKSFSL*PLRIKC
Trigger: GCATTTAATCCTAAGGGGCCAAAGGGAGAAGGACTT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGGATCCCAGGGTGGGTaGAAACAGATAAAGATTTGT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQGSQGG*KQIKIC
Trigger: ACAAATCTTTATCTGTTTCCACCCACCCTGGGATCC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCATCCCAAGCCCAAGTaGTACGTGCCTCACTCAGAA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGHPKPK*YVPHSE
Trigger: TTCTGAGTGAGGCACGTACCACTTGGGCTTGGGATG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGAAACGTGTCTGGTCTaGGCAAGTTGTGGCGAGGCG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTETCLV*ASCGEA
Trigger: CGCCTCGCCACAACTTGCCCAGACCAGACACGTTTC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361396.6
ENST00000376829.7
3UTR CAA 72 bp ACTGCTCCAGGAAGGGCTAATGGGGCCAATATATTATaGCCTGTCATGTGGCACATCCATGTTAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TAPGRANGANIL*PVMWHIHVKGL
Trigger: CAGCCCCTTAACATGGATGTGCCACATGACAGGCAATAATATATTGGCCCCATTAGCCCTTCCTGGAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGGTGAGGAACTCTTGTaGGTGCAGCAAGTACTCGAT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGGEELL*VQQVLD
Trigger: ATCGAGTACTTGCTGCACTCACAAGAGTTCCTCACC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GCTTTCCTGACTATCAAGAAGCTGCATGACATTATGGAAATCCTGGGGATATGGTGTGCAGCTGCGAGGTaGGGAACTCTTGTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: AFLTIKKLHDIMEILGIWCAAAR*GTLVSA
Trigger: TGCACTCACAAGAGTTCCTCACCTCGCAGCTGCACA...CCATATCCCCAGGATTTCCATAATGTCATGCAGCTTCTTGATAGTCAGGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTGCCTATGTTGGACTTaGTCTGCATATTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQCLCWT*SAYWTS
Trigger: AGAAGTCCAATATGCAGATCAAGTCCAACATAGGCA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCACCATTGGCAGACTTaGTTTAGTTTCCAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQHHWQT*FSFQSV
Trigger: CACACTTTGGAAACTAAATCAAGTCTGCCAATGGTG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGATGCAACTGATCACTTaGAATGCCACGTATATCTGC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQMQLIT*NATYIC
Trigger: GCAGATATACGTGGCATTTCAAGTGATCAGTTGCAT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCTTGATTCATTTTCTTaGAGTCCTTCTCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQLDSFS*SPSPFG
Trigger: GCCAAAGGGAGAAGGACTTCAAGAAAATGAATCAAG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTAGGGAGGGTGGGGGATaGAGGTCTGTTAGTAACCAG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTREGGG*RSVSNQ
Trigger: CTGGTTACTAACAGACCTTCATCCCCCACCCTCCCT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTAACTTGGGTCGGGGCTaGATTCTGGGCTTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTNLGRG*ILGFGE
Trigger: CTCTCCAAAGCCCAGAATGCAGCCCCGACCCAAGTT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATCCGCTGCCTCAGCTTaGATAGGAGGAGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILSAASA*IGGAGR
Trigger: CCGCCCGGCTCCTCCTATGCAAGCTGAGGCAGCGGA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTCAGACCTGGTGAGCTaGAGCTCTTCCTTCAATACG +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGSDLVS*SSSFNT
Trigger: CGTATTGAAGGAAGAGCTGCAGCTCACCAGGTCTGA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCTCGAGCTGTCCATTTaGTTTCCTGACTATCAAGAA +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQLELSI*FPDYQE
Trigger: TTCTTGATAGTCAGGAAAGCAAATGGACAGCTCGAG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTGTAGTTTTGTAGATTaGCGTTCTCTGTCCTACCAC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQCSFVD*RSLSYH
Trigger: GTGGTAGGACAGAGAACGGCAATCTACAAAACTACA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGATGGCCATATCCACATaGCCATGGCCACTCAGTAGA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGMAIST*PWPLSR
Trigger: TCTACTGAGTGGCCATGGGCATGTGGATATGGCCAT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TATTGGTTCCAGTATGTGCGACGAGAATGCCTGTTCATGCACCATTGGCAGACTTCCCGCCTCTTACCATaGTTGAAAACCAATCCGCTG +
Preference number: 4 (lower is better)
Translates to: YWFQYVRRECLFMHHWQTSRLLP*LKTNPL
Trigger: CAGCGGATTGGTTTTCAAGCATGGTAAGAGGCGGGA...AGTCTGCCAATGGTGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGCCCAGGTCCGGACCTaGAGCAAAGGGCGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNAQVRT*SKGRVC
Trigger: GCAGACGCGCCCTTTGCTCCAGGTCCGGACCTGGGC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGCCCCTCTGGGCCGCTaGCGAGCGGGTAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILAPLGR*RAGSRH
Trigger: ATGTCTACTACCCGCTCGCCAGCGGCCCAGAGGGGC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCTGACTGCACTGGCATaGTGTGCAGCCTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTLTALA*CAASSS
Trigger: TGAGCTAGAGGCTGCACACCATGCCAGTGCAGTCAG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTGGGGTGTGGAGGGGTaGAGTCTTGCTATATTGCCC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTWGVEG*SLAILP
Trigger: GGGCAATATAGCAAGACTCCACCCCTCCACACCCCA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGGGCTGAGGCGTCCCTaGCACGGAATGCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILGLRRP*HGMQSP
Trigger: AGGGCTCTGCATTCCGTGCCAGGGACGCCTCAGCCC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGGTCTGGGCAAGTTGTaGCGAGGCGGGTCGACTGGC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILGLGKL*RGGSTG
Trigger: GCCAGTCGACCCGCCTCGCCACAACTTGCCCAGACC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACCCCCGCCTGCTTGGTaGGCAGCTTCTTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILPPPAW*AASCSA
Trigger: AGCAGAGCAAGAAGCTGCTCACCAAGCAGGCGGGGG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TTGGTTCCAGTATGTGCGACGAGAATGCCTGTTCATGCACCATTGGCAGACTTGGTCCATTTGCTTTCCTaGCTATCAAGAAGCTGCATG +
Preference number: 4 (lower is better)
Translates to: LVPVCATRMPVHAPLADLVHLLS*LSRSCM
Trigger: CATGCAGCTTCTTGATAGTCAGGAAAGCAAATGGAC...CAAGTCTGCCAATGGTGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCAGGCATTTAGCACATaGGCAAAATGTGGTTCATTT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQQAFST*AKCGSF
Trigger: AAATGAACCACATTTTGCTCATGTGCTAAATGCCTG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTGCCCACGCTGGTCTTaGACTCCTGTGCTCAAGTTA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTCPRWS*TPVLKL
Trigger: TAACTTGAGCACAGGAGTTCAAGACCAGCGTGGGCA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTGCCTCACTCAGAACTaGCGGGCCGAGTTCTATCTA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTCLTQN*RAEFYL
Trigger: TAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GAGAATGCCTGTTCATGCACCATTGGCAGACTTGATTTAGTTTCCAAAGTGTGCGCCTCTTACCATGCTTaGAAACCAATCCGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ENACSCTIGRLDLVSKVCASYHA*KPIRCL
Trigger: GAGGCAGCGGATTGGTTTTCAAGCATGGTAAGAGGC...GCACACTTTGGAAACTAAATCAAGTCTGCCAATGGTGCATGAACAGGCATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGGGCGTCCAGGACGTTaGTATAGCAGCGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILGRPGR*YSSAQV
Trigger: GACCTGGGCGCTGCTATAGCAACGTCCTGGACGCCC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTACTCGATGGTGAACTaGGCCAGACGGATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTYSMVN*ARRMSF
Trigger: GAAGCTCATCCGTCTGGCGCAGTTCACCATCGAGTA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AAGTTCTTCTATTGGTTCCAGTATGTGCGACGAGAATGCCTGTTCATGCACCATTACTCGATGGTGAACTaGGCCAGACGGATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: KFFYWFQYVRRECLFMHHYSMVN*ARRMSF
Trigger: GAAGCTCATCCGTCTGGCGCAGTTCACCATCGAGTA...ATGGTGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAATAGAAGAACTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACGCTCCTCCAGGGTGTaGAGCTGCGAGGTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILRSSRV*SCEVRN
Trigger: GTTCCTCACCTCGCAGCTGCACACCCTGGAGGAGCG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCTTGGAGAATCTGACTaGACTGGCATGGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTLGESD*TGMVCS
Trigger: GCTGCACACCATGCCAGTGCAGTCAGATTCTCCAAG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGATAATCAGCTCATTCTaGTCCTGGAGTCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGIISSF*SWSLCP
Trigger: AGGGCAGAGACTCCAGGAGCAGAATGAGCTGATTAT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TTGGTTCCAGTATGTGCGACGAGAATGCCTGTTCATGCACCATTGGCAGACTTGTTAGTTTCCAAAGTGTaGAGGGCTGGGGCATTCATA +
Preference number: 4 (lower is better)
Translates to: LVPVCATRMPVHAPLADLLVSKV*RAGAFI
Trigger: TATGAATGCCCCAGCCCTGCACACTTTGGAAACTAA...CAAGTCTGCCAATGGTGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTTCTCCATCAAGTTCTaGTCCACCATTGTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQFSIKF*STIVLS
Trigger: ACTAAGAACAATGGTGGAGCAGAACTTGATGGAGAA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAATGCCACGTATATCTaGATTAATCCCCAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQNATYI*INPQGF
Trigger: GAAACCTTGGGGATTAATGCAGATATACGTGGCATT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCCATTTGAGAAACACTaGACTGATCTGAAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQPFEKH*TDLKRV
Trigger: TACTCTCTTCAGATCAGTGCAGTGTTTCTCAAATGG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTGTTCTTCCCGAAGCTaGCCTTGTTTTGTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTCSSRS*PCFVVA
Trigger: CGCCACCACAAAACAAGGGCAGCTTCGGGAAGAACA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTTTAACGGCGACTCCTaGGGGCTTGGGAGAATCATC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTFNGDS*GLGRII
Trigger: GATGATTCTCCCAAGCCCGCAGGAGTCGCCGTTAAA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGATTCTCTTTGATGTATaGAGAGAGTTACGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQILFDV*RELRSR
Trigger: CCTGCTACGTAACTCTCTGCATACATCAAAGAGAAT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTTTCTATGGGTCTTCTaGGGGCCTCCAGTGGTTACC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTFLWVF*GPPVVT
Trigger: GGTAACCACTGGAGGCCCCCAGAAGACCCATAGAAA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGAACCCTTACAAACTTaGGTCGGGGCTGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTEPLQT*VGAAFW
Trigger: CCAGAATGCAGCCCCGACCCAAGTTTGTAAGGGTTC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGCCCCTCTGGGCCGCTaGCGAGCGGGTAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNAPLGR*RAGSRH
Trigger: ATGTCTACTACCCGCTCGCCAGCGGCCCAGAGGGGC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGGGTCCACCCCCGACTaGCAGTGTGGGCACTTCTCG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNGSTPD*QCGHFS
Trigger: CGAGAAGTGCCCACACTGCCAGTCGGGGGTGGACCC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TATTGGTTCCAGTATGTGCGACGAGAATGCCTGTTCATGCACCATTGGCAGACTTCGATCATCAGCTGCTaGGTGGAGATCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: YWFQYVRRECLFMHHWQTSIISC*VEIIFF
Trigger: GAAGAAGATGATCTCCACCCAGCAGCTGATGATCGA...AGTCTGCCAATGGTGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAATA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGGTAATAGTTGGCTTTaGCCTCGATCATCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGGNSWL*PRSSAA
Trigger: AGCAGCTGATGATCGAGGCCAAAGCCAACTATTACC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGGCACTGGTAATAGTTaGCTTTGGCCTCGATCATCA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGGTGNS*LWPRSS
Trigger: TGATGATCGAGGCCAAAGCCAACTATTACCAGTGCC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTCTTTCCACAGCTGGAGCAGCTaGCTGAGATTCAAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: IIEVRSFSICDRSRPFSFHSWSS*LRFKSL
Trigger: CAGGCTTTTGAATCTCAGCCAGCTGCTCCAGCTGTG...GAAAGAGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTTCATTTTTCGCAGGTaGAGGTTCCTTCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQFIFRR*RFLLFF
Trigger: AAAGAACAGAAGGAACCTCCACCTGCGAAAAATGAA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCCAAACCAGACCAAGTaGTTCAATAAATATCTGCTG +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQPNQTK*FNKYLL
Trigger: CAGCAGATATTTATTGAACCACTTGGTCTGGTTTGG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCATCCCAAGCCCAAGTaGTACGTGCCTCACTCAGAA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTHPKPK*YVPHSE
Trigger: TTCTGAGTGAGGCACGTACCACTTGGGCTTGGGATG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGGGCTGAGGCGTCCCTaGCACGGAATGCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNGLRRP*HGMQSP
Trigger: AGGGCTCTGCATTCCGTGCCAGGGACGCCTCAGCCC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGGTCTGGGCAAGTTGTaGCGAGGCGGGTCGACTGGC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNGLGKL*RGGSTG
Trigger: GCCAGTCGACCCGCCTCGCCACAACTTGCCCAGACC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTAGGATGAAACGTGTCTaGTCTGGGCAAGTTGTGGCG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTRMKRV*SGQVVA
Trigger: CGCCACAACTTGCCCAGACCAGACACGTTTCATCCT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCAAAGTGTGCAGGGCTaGGGCATTCACTTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTQSVQG*GIHFGF
Trigger: GAACCCAAAGTGAATGCCCCAGCCCTGCACACTTTG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361156.7
ENST00000361396.6
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATACTGCGCCAGACGGATaGGCTTCAGCAGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNTAPDG*ASAAPG
Trigger: ACCCGGTGCTGCTGAAGCTCATCCGTCTGGCGCAGT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCCCCCGCCTGCTTGGTaGGCAGCTTCTTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNPPPAW*AASCSA
Trigger: AGCAGAGCAAGAAGCTGCTCACCAAGCAGGCGGGGG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTATTCCTTGGAGAATCTaGCTGCACTGGCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTIPWRI*LHWHGV
Trigger: CACACCATGCCAGTGCAGTCAGATTCTCCAAGGAAT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTTAATCTGCTGTCTCTaGGTTATAATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQLICCL*VIISSF
Trigger: GAATGAGCTGATTATAACTCAGAGACAGCAGATTAA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTTCCTTTGGGTTCACTaGTACTGTTTAATGGATTAC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQFLWVH*YCLMDY
Trigger: GTAATCCATTAAACAGTATCAGTGAACCCAAAGGAA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347108.7
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTCCTTTTTCTTCCTCTaGAAGTTCTTCTATTGGTTC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQSFFFL*KFFYWF
Trigger: GAACCAATAGAAGAACTTTCAGAGGAAGAAAAAGGA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGGGTACTTCTCCAGTTaGAAGGGTATCCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGGYFSS*KGIHLR
Trigger: TCTCAAATGGATACCCTTTCAACTGGAGAAGTACCC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGAGGGGTCGTAATAGTTaGAGACTTTCTGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGRGRNS*RLSGKR
Trigger: CCTTTTCCCAGAAAGTCTTCAACTATTACGACCCCT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAATGCGTATGCCCGGATaGGGTCGTCGTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILMRMPG*GRRPPA
Trigger: AGCAGGAGGACGACGACCTCATCCGGGCATACGCAT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCAGCCACAGTCACAGTaGTGTAACAGAGGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTQPQSQ*CNRGLY
Trigger: GTAAAGCCCTCTGTTACATCACTGTGACTGTGGCTG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGTGAGTATATCTGCATaGAATGGCCCCTATAGGAAG +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGVSISA*NGPYRK
Trigger: CTTCCTATAGGGGCCATTTCATGCAGATATACTCAC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGGCATCAGCAGAAGCTaGGATAGAGATATTGGTCAT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGGISRS*DRDIGH
Trigger: ATGACCAATATCTCTATCTCAGCTTCTGCTGATGCC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGAGCATGGGGGCAATCTaGGAATATTCCTCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGSMGAI*EYSSKG
Trigger: ACCTTTTGAGGAATATTCTCAGATTGCCCCCATGCT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTCACTTTGGGTTCACTaGTACTGTTTAATGGATTAC +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQSLWVH*YCLMDY
Trigger: GTAATCCATTAAACAGTATCAGTGAACCCAAAGTGA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361156.7
ENST00000361396.6
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGGGCGTCCAGGACGTTaGTATAGCAGCGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNGRPGR*YSSAQV
Trigger: GACCTGGGCGCTGCTATAGCAACGTCCTGGACGCCC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTTCATGATGTTCTCCTaGAGCGTCAGCACGTCCACA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTFMMFS*SVSTST
Trigger: TGTGGACGTGCTGACGCTGCAGGAGAACATCATGAA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTCTTTCTTCATGATGTTCTCCTaGAGCGTCAGCACGTCCACA +
Preference number: 4 (lower is better)
Translates to: IIEVRSFSICDRSRPFSFFMMFS*SVSTST
Trigger: TGTGGACGTGCTGACGCTGCAGGAGAACATCATGAA...GAAAGAGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAGCAGCTTCTTGCTCTaGTCGCCGTCGCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILSSFLL*SPSQWL
Trigger: GAGCCACTGCGACGGCGAGCAGAGCAAGAAGCTGCT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTCAGACCTGGTGAGCTaGAGCTCTTCCTTCAATACG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTSDLVS*SSSFNT
Trigger: CGTATTGAAGGAAGAGCTGCAGCTCACCAGGTCTGA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AAGTTCTTCTATTGGTTCCAGTATGTGCGACGAGAATGCCTGTTCATGCACCATTCAGACCTGGTGAGCTaGAGCTCTTCCTTCAATACG +
Preference number: 4 (lower is better)
Translates to: KFFYWFQYVRRECLFMHHSDLVS*SSSFNT
Trigger: CGTATTGAAGGAAGAGCTGCAGCTCACCAGGTCTGA...ATGGTGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAATAGAAGAACTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp GCTTTCCTGACTATCAAGAAGCTGCATGACATTATGGAAATCCTGGGGATATGGTGCTCCTGGAGTCTCTaGCCTAGCTCTTCTATCCTT +
Preference number: 4 (lower is better)
Translates to: AFLTIKKLHDIMEILGIWCSWSL*PSSSIL
Trigger: AAGGATAGAAGAGCTAGGGCAGAGACTCCAGGAGCA...CCATATCCCCAGGATTTCCATAATGTCATGCAGCTTCTTGATAGTCAGGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGAGAATGCCTGTTCATaGACCATTGGCAGACTTGAT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGENACS*TIGRLD
Trigger: ATCAAGTCTGCCAATGGTGCATGAACAGGCATTCTC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGATTGGTTCCAGTATGTaGGACGAGAATGCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGIGSSM*DENACS
Trigger: TGAACAGGCATTCTCGTCGCACATACTGGAACCAAT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTAGGTCGTCGTCCTCCTaGTCCTCCTCTGAACTAAAA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTRSSSS*SSSELK
Trigger: TTTTAGTTCAGAGGAGGAGCAGGAGGACGACGACCT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGCCTGGGGATGCGTATaGCCGGATGAGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNAWGCV*PDEVVV
Trigger: GACGACGACCTCATCCGGGCATACGCATCCCCAGGC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAAGTGGGCCTGGGGATaGGTATGCCCGGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILKWAWG*VCPDEV
Trigger: GACCTCATCCGGGCATACGCATCCCCAGGCCCACTT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTATGGCCATATCCACATaGCCATGGCCACTCAGTAGA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTMAIST*PWPLSR
Trigger: TCTACTGAGTGGCCATGGGCATGTGGATATGGCCAT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCGGCGGCCTAAGGTCTaGGCGTCCAGGACGTTGCTA +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNRRPKV*ASRTLL
Trigger: TAGCAACGTCCTGGACGCCCAGACCTTAGGCCGCCG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACCCCGACTGGCAGTGTaGGCACTTCTCGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILPRLAV*ALLVFQ
Trigger: CTGGAAGACGAGAAGTGCCCACACTGCCAGTCGGGG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TTATGGAAATCCTGGGGATATGGAGAACGGTCTTCTTTAAACTCGTGTGCATCTTCATCAGCTGCTGGGTaGAGATCATCTTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: LWKSWGYGERSSLNSCASSSAAG*RSSSSG
Trigger: GCCGGAAGAAGATGATCTCCACCCAGCAGCTGATGA...AGATGCACACGAGTTTAAAGAAGACCGTTCTCCATATCCCCAGGATTTCCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCTTTGTAGAAAAGCTTaGTTCATAAAGGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQLCRKA*FIKALS
Trigger: TGACAAGGCCTTTATGAACCAAGCTTTTCTACAAAG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTATTCATAGGCACAGCTaGAGCAGCTGGCTGAGATTC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTIHRHS*SSWLRF
Trigger: GAATCTCAGCCAGCTGCTCCAGCTGTGCCTATGAAT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347108.7
ENST00000376829.7
CDS-3UTR CCA 90 bp CGATCTCACTCCGGAGCTTCTCAATCTGTGCATTTTTCTGATACTATGCAGATGATTCATAGGCACAGCTaGAGCAGCTGGCTGAGATTC +
Preference number: 4 (lower is better)
Translates to: RSHSGASQSVHFSDTMQMIHRHS*SSWLRF
Trigger: GAATCTCAGCCAGCTGCTCCAGCTGTGCCTATGAAT...CATCTGCATAGTATCAGAAAAATGCACAGATTGAGAAGCTCCGGAGTGAGATCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACACAGGAAGTGGGCCTaGGGATGCGTATGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILHRKWA*GCVCPD
Trigger: ATCCGGGCATACGCATCCCCAGGCCCACTTCCTGTG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTGGCGGCACAGGAAGTaGGCCTGGGGATGCGTATGC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNWRHRK*AWGCVC
Trigger: GCATACGCATCCCCAGGCCCACTTCCTGTGCCGCCA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGAAGTCCTTCTCCCTTTaGCCCCTTAGGATTAAATGC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGKSFSL*PLRIKC
Trigger: GCATTTAATCCTAAGGGGCCAAAGGGAGAAGGACTT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGAAGCACTAGAATCATaGAGGCAAATTACTGAAACA +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQEALES*RQITET
Trigger: TGTTTCAGTAATTTGCCTCCATGATTCTAGTGCTTC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGGACAGAATGTCATATaGCATAGCAATCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGGQNVI*HSNQGQ
Trigger: CTGGCCTTGATTGCTATGCCATATGACATTCTGTCC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGCCCCTATAGGAAGTTaGAAGGATTCTTTTAGAGGG +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGAPIGS*KDSFRG
Trigger: CCCTCTAAAAGAATCCTTCCAACTTCCTATAGGGGC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCAGAAACACATTAGTTaGGCATCAGTAAGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGQKHIS*ASVRGN
Trigger: GTTGCCCCTTACTGATGCCCAACTAATGTGTTTCTG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTTATTGCCTGTCATGTaGCACATCCATGTTAAGGGG +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGLLPVM*HIHVKG
Trigger: CCCCTTAACATGGATGTGCCACATGACAGGCAATAA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp CTTCAATACGACGATCTCACTCCGGAGCTTCTCAATCTGTGCATTTTTCTGATAATTCCTTGGAGAATCTaGCTGCACTGGCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: LQYDDLTPELLNLCIFLIIPWRI*LHWHGV
Trigger: CACACCATGCCAGTGCAGTCAGATTCTCCAAGGAAT...TATCAGAAAAATGCACAGATTGAGAAGCTCCGGAGTGAGATCGTCGTATTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCACCATTGGCAGACTTaGTTTAGTTTCCAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGHHWQT*FSFQSV
Trigger: CACACTTTGGAAACTAAATCAAGTCTGCCAATGGTG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCTTGATTCATTTTCTTaGAGTCCTTCTCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGLDSFS*SPSPFG
Trigger: GCCAAAGGGAGAAGGACTTCAAGAAAATGAATCAAG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGAGAAACTGTCCGATATaGATCACAACGTGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGRNCPI*ITTWVN
Trigger: ATTCACCCACGTTGTGATTCATATCGGACAGTTTCT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACGGAATGCAGAGCCCTaGGCTAGGGCATCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILRNAEP*ARASAE
Trigger: TTCTGCTGATGCCCTAGCTCAGGGCTCTGCATTCCG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTCCATGTTAAGGGGCTaGGGCGTCCCTGGCACGGAA +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNSMLRG*GVPGTE
Trigger: TTCCGTGCCAGGGACGCCTCAGCCCCTTAACATGGA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTTGCAGGGCGCAGGATaGAACGTGTCTGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNLQGAG*NVSGLG
Trigger: GCCCAGACCAGACACGTTTCATCCTGCGCCCTGCAA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACGCGCAGGGTCAGCGTaGACCCAGAACCCTTACAAA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILRAGSA*TQNPYK
Trigger: TTTGTAAGGGTTCTGGGTGCACGCTGACCCTGCGCG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TCTATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTCTAGGAACTCTTGTGAGTaGAGCAAGTACTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: SIIEVRSFSICDRSRPFSRNSCE*SKYSMV
Trigger: CACCATCGAGTACTTGCTGCACTCACAAGAGTTCCT...AGAGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATAGCAGCTTCTTGCTCTaGTCGCCGTCGCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNSSFLL*SPSQWL
Trigger: GAGCCACTGCGACGGCGAGCAGAGCAAGAAGCTGCT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGTCCATTTGCTTTCCTGACTATCAAGAAGCTGCATGACATTATGGAAATCCTGCTTGGAGAATCTGACTaGACTGGCATGGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CPFAFLTIKKLHDIMEILLGESD*TGMVCS
Trigger: GCTGCACACCATGCCAGTGCAGTCAGATTCTCCAAG...CAGGATTTCCATAATGTCATGCAGCTTCTTGATAGTCAGGAAAGCAAATGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTATGTGCGACGAGAATaGCTGTTCATGCACCATTGG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTYVRRE*LFMHHW
Trigger: CCAATGGTGCATGAACAGGCATTCTCGTCGCACATA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATCAAGAAGCTGCATGACATTATGGAAATCCTGGGGATATGGAGAACGGTCTTCTATGTGCGACGAGAATaGCTGTTCATGCACCATTGG +
Preference number: 4 (lower is better)
Translates to: IKKLHDIMEILGIWRTVFYVRRE*LFMHHW
Trigger: CCAATGGTGCATGAACAGGCATTCTCGTCGCACATA...GAAGACCGTTCTCCATATCCCCAGGATTTCCATAATGTCATGCAGCTTCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATAAGTGGGCCTGGGGATaGGTATGCCCGGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNKWAWG*VCPDEV
Trigger: GACCTCATCCGGGCATACGCATCCCCAGGCCCACTT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTGTAGTTTTGTAGATTaGCGTTCTCTGTCCTACCAC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGCSFVD*RSLSYH
Trigger: GTGGTAGGACAGAGAACGGCAATCTACAAAACTACA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTGTTTTCATAAACGATaGTGTGATGAAGACTCATGT +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQCFHKR*CDEDSC
Trigger: ACATGAGTCTTCATCACAGCATCGTTTATGAAAACA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCCCCGACTGGCAGTGTaGGCACTTCTCGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNPRLAV*ALLVFQ
Trigger: CTGGAAGACGAGAAGTGCCCACACTGCCAGTCGGGG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp CATCTATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTGGTAATAGTTGGCTTTaGCCTCGATCATCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HLSLRFEVSLYVTGADPSGNSWL*PRSSAA
Trigger: AGCAGCTGATGATCGAGGCCAAAGCCAACTATTACC...AGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGATAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGGCACTGGTAATAGTTaGCTTTGGCCTCGATCATCA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTGTGNS*LWPRSS
Trigger: TGATGATCGAGGCCAAAGCCAACTATTACCAGTGCC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGAAGTTGTATCATTTTaGGTACTTCTCCAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQEVVSF*VLLQLK
Trigger: TTTCAACTGGAGAAGTACCCAAAATGATACAACTTC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCACAGGAAGTGGGCCTaGGGATGCGTATGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNHRKWA*GCVCPD
Trigger: ATCCGGGCATACGCATCCCCAGGCCCACTTCCTGTG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCTGTTTACGGCTAACTaGATAACTGAGAGACTTGTC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGLFTAN*ITERLV
Trigger: GACAAGTCTCTCAGTTATCCAGTTAGCCGTAAACAG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACTGGAAGGGCATGCTTaGAAACCAATCCGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILLEGHA*KPIRCL
Trigger: GAGGCAGCGGATTGGTTTTCAAGCATGCCCTTCCAG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATGTGCAGCTGCGAGGTaGGGAACTCTTGTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILCAAAR*GTLVSA
Trigger: TGCACTCACAAGAGTTCCTCACCTCGCAGCTGCACA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGTCCATTTGCTTTCCTaGCTATCAAGAAGCTGCATG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTVHLLS*LSRSCM
Trigger: CATGCAGCTTCTTGATAGTCAGGAAAGCAAATGGAC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGGGTACTTCTCCAGTTaGAAGGGTATCCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTGYFSS*KGIHLR
Trigger: TCTCAAATGGATACCCTTTCAACTGGAGAAGTACCC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACTCCTGCTCCTCCTCTaGACTAAAAGGAGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILLLLLL*TKRRGR
Trigger: ACGACCCCTCCTTTTAGTTCAGAGGAGGAGCAGGAG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCGGAATGCAGAGCCCTaGGCTAGGGCATCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNRNAEP*ARASAE
Trigger: TTCTGCTGATGCCCTAGCTCAGGGCTCTGCATTCCG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGACTGTAATTCATTATaGCTGCTCCAGGAAGGGCTA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTDCNSL*LLQEGL
Trigger: TAGCCCTTCCTGGAGCAGTCATAATGAATTACAGTC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TATTGGTTCCAGTATGTGCGACGAGAATGCCTGTTCATGCACCATTGGCAGACTAGATGTACACATGACTaGATGGATGTACATGTGTCT +
Preference number: 4 (lower is better)
Translates to: YWFQYVRRECLFMHHWQTRCTHD*MDVHVS
Trigger: AGACACATGTACATCCATTCAGTCATGTGTACATCT...AGTCTGCCAATGGTGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAATA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACCACCGGGGAATTCCTaGTTGGACCAGACATCAGGA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILPPGNS*LDQTSG
Trigger: TCCTGATGTCTGGTCCAAGCAGGAATTCCCCGGTGG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAACTTGGGTCGGGGCTaGATTCTGGGCTTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILNLGRG*ILGFGE
Trigger: CTCTCCAAAGCCCAGAATGCAGCCCCGACCCAAGTT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TCTATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTCTGAGAATGCCTGTTCATaGACCATTGGCAGACTTGAT +
Preference number: 4 (lower is better)
Translates to: SIIEVRSFSICDRSRPFSENACS*TIGRLD
Trigger: ATCAAGTCTGCCAATGGTGCATGAACAGGCATTCTC...AGAGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp AAGTTCTTCTATTGGTTCCAGTATGTGCGACGAGAATGCCTGTTCATGCACCATATTGGTTCCAGTATGTaGGACGAGAATGCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: KFFYWFQYVRRECLFMHHIGSSM*DENACS
Trigger: TGAACAGGCATTCTCGTCGCACATACTGGAACCAAT...ATGGTGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAATAGAAGAACTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTTCTCCATCAAGTTCTaGTCCACCATTGTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGFSIKF*STIVLS
Trigger: ACTAAGAACAATGGTGGAGCAGAACTTGATGGAGAA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACTGACTGCACTGGCATaGTGTGCAGCCTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILLTALA*CAASSS
Trigger: TGAGCTAGAGGCTGCACACCATGCCAGTGCAGTCAG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGAAATCCTGGGGATATaGAGAACGGTCTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGEILGI*RTVFFK
Trigger: TTTAAAGAAGACCGTTCTCCATATCCCCAGGATTTC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGCTCTTCCTTCAATACGACGATCTCACTCCGGAGCTTCTCAATCTGTGCATTTAGCTGCATGACATTATaGAAATCCTGGGGATATGGA +
Preference number: 4 (lower is better)
Translates to: SSSFNTTISLRSFSICAFSCMTL*KSWGYG
Trigger: TCCATATCCCCAGGATTTCCATAATGTCATGCAGCT...AAATGCACAGATTGAGAAGCTCCGGAGTGAGATCGTCGTATTGAAGGAAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGATTAGTTCCACCGACTaGTTTGTTCACATTTTTGCG +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGISSTD*FVHIFA
Trigger: CGCAAAAATGTGAACAAACCAGTCGGTGGAACTAAT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGGATCCCAGGGTGGGTaGAAACAGATAAAGATTTGT +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTGSQGG*KQIKIC
Trigger: ACAAATCTTTATCTGTTTCCACCCACCCTGGGATCC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTTTAGAGGGCAGGAATaGGCTACAAGTAAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGFRGQE*ATSKKD
Trigger: ATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGCCCCTATAGGAAGTTaGAAGGATTCTTTTAGAGGG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTAPIGS*KDSFRG
Trigger: CCCTCTAAAAGAATCCTTCCAACTTCCTATAGGGGC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCCAAACCAGACCAAGTaGTTCAATAAATATCTGCTG +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGPNQTK*FNKYLL
Trigger: CAGCAGATATTTATTGAACCACTTGGTCTGGTTTGG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGAAACGTGTCTGGTCTaGGCAAGTTGTGGCGAGGCG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNETCLV*ASCGEA
Trigger: CGCCTCGCCACAACTTGCCCAGACCAGACACGTTTC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCTGGAAGGGCATGCTTaGAAACCAATCCGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNLEGHA*KPIRCL
Trigger: GAGGCAGCGGATTGGTTTTCAAGCATGCCCTTCCAG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTGCCTATGTTGGACTTaGTCTGCATATTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTCLCWT*SAYWTS
Trigger: AGAAGTCCAATATGCAGATCAAGTCCAACATAGGCA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AAGTTCTTCTATTGGTTCCAGTATGTGCGACGAGAATGCCTGTTCATGCACCATTGCCTATGTTGGACTTaGTCTGCATATTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: KFFYWFQYVRRECLFMHHCLCWT*SAYWTS
Trigger: AGAAGTCCAATATGCAGATCAAGTCCAACATAGGCA...ATGGTGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAATAGAAGAACTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTTAATCTGCTGTCTCTaGGTTATAATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGLICCL*VIISSF
Trigger: GAATGAGCTGATTATAACTCAGAGACAGCAGATTAA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGTTCATGCACCATTGGCAGACTTGATTTAGTTTCCAAAGTGTGCAGGGCTGGGTTAATCTGCTGTCTCTaGGTTATAATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: CSCTIGRLDLVSKVCRAGLICCL*VIISSF
Trigger: GAATGAGCTGATTATAACTCAGAGACAGCAGATTAA...CCCAGCCCTGCACACTTTGGAAACTAAATCAAGTCTGCCAATGGTGCATGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTCCTTTTTCTTCCTCTaGAAGTTCTTCTATTGGTTC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGSFFFL*KFFYWF
Trigger: GAACCAATAGAAGAACTTTCAGAGGAAGAAAAAGGA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTATGCAACTGATCACTTaGAATGCCACGTATATCTGC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTMQLIT*NATYIC
Trigger: GCAGATATACGTGGCATTTCAAGTGATCAGTTGCAT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTAGTACTCTATGCAACTaGTCACTTGAAATGCCACGT +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTSTLCN*SLEMPR
Trigger: ACGTGGCATTTCAAGTGATCAGTTGCATAGAGTACT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGATTTTACAGCTGACTTaGTGTTCAAGGAATTCTCGA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGILQLT*CSRNSR
Trigger: TCGAGAATTCCTTGAACATCAAGTCAGCTGTAAAAT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCTCCTGCTCCTCCTCTaGACTAAAAGGAGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNLLLLL*TKRRGR
Trigger: ACGACCCCTCCTTTTAGTTCAGAGGAGGAGCAGGAG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCTTGATTCATTTTCTTaGAGTCCTTCTCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTLDSFS*SPSPFG
Trigger: GCCAAAGGGAGAAGGACTTCAAGAAAATGAATCAAG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTCTGGAATAATCTTCTaGCATGTGGAATTAGACATC +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGSGIIF*HVELDI
Trigger: GATGTCTAATTCCACATGTCAGAAGATTATTCCAGA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATAGGGAGGGTGGGGGATaGAGGTCTGTTAGTAACCAG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNREGGG*RSVSNQ
Trigger: CTGGTTACTAACAGACCTTCATCCCCCACCCTCCCT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATACTCGATGGTGAACTaGGCCAGACGGATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILYSMVN*ARRMSF
Trigger: GAAGCTCATCCGTCTGGCGCAGTTCACCATCGAGTA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGCCTCGATCATCAGCTaGTGGGTGGAGATCATCTTC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILASIIS*WVEIIF
Trigger: GAAGATGATCTCCACCCAGCAGCTGATGATCGAGGC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACTTGGAGAATCTGACTaGACTGGCATGGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILLGESD*TGMVCS
Trigger: GCTGCACACCATGCCAGTGCAGTCAGATTCTCCAAG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCTCGAGCTGTCCATTTaGTTTCCTGACTATCAAGAA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTLELSI*FPDYQE
Trigger: TTCTTGATAGTCAGGAAAGCAAATGGACAGCTCGAG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTCTTTCTCTCGAGCTGTCCATTTaGTTTCCTGACTATCAAGAA +
Preference number: 4 (lower is better)
Translates to: SLRFEVSLYVTGADPSLSLELSI*FPDYQE
Trigger: TTCTTGATAGTCAGGAAAGCAAATGGACAGCTCGAG...AGAAAGAGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATGTTCTTCCCGAAGCTaGCCTTGTTTTGTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILCSSRS*PCFVVA
Trigger: CGCCACCACAAAACAAGGGCAGCTTCGGGAAGAACA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATTTAACGGCGACTCCTaGGGGCTTGGGAGAATCATC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILFNGDS*GLGRII
Trigger: GATGATTCTCCCAAGCCCGCAGGAGTCGCCGTTAAA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTGTAGTTTTGTAGATTaGCGTTCTCTGTCCTACCAC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTCSFVD*RSLSYH
Trigger: GTGGTAGGACAGAGAACGGCAATCTACAAAACTACA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGTCGGGGCTGCATTCTaGGCTTTGGAGAGGCTAAAA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILVGAAF*ALERLK
Trigger: TTTTAGCCTCTCCAAAGCCCAGAATGCAGCCCCGAC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGAACCCTTACAAACTTaGGTCGGGGCTGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILEPLQT*VGAAFW
Trigger: CCAGAATGCAGCCCCGACCCAAGTTTGTAAGGGTTC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGTTCATGCACCATTGGCAGACTTGATTTAGTTTCCAAAGTGTGCAGGGCTGGGCTTTGTAGAAAAGCTTaGTTCATAAAGGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: CSCTIGRLDLVSKVCRAGLCRKA*FIKALS
Trigger: TGACAAGGCCTTTATGAACCAAGCTTTTCTACAAAG...CCCAGCCCTGCACACTTTGGAAACTAAATCAAGTCTGCCAATGGTGCATGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCTGACTGCACTGGCATaGTGTGCAGCCTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNLTALA*CAASSS
Trigger: TGAGCTAGAGGCTGCACACCATGCCAGTGCAGTCAG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTACATTATGGAAATCCTaGGGATATGGAGAACGGTCT +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTTLWKS*GYGERS
Trigger: AGACCGTTCTCCATATCCCCAGGATTTCCATAATGT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTCTTTCTACATTATGGAAATCCTaGGGATATGGAGAACGGTCT +
Preference number: 4 (lower is better)
Translates to: SLRFEVSLYVTGADPSLSTLWKS*GYGERS
Trigger: AGACCGTTCTCCATATCCCCAGGATTTCCATAATGT...AGAAAGAGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGAAGCACTAGAATCATaGAGGCAAATTACTGAAACA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGEALES*RQITET
Trigger: TGTTTCAGTAATTTGCCTCCATGATTCTAGTGCTTC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTGGGGTGTGGAGGGGTaGAGTCTTGCTATATTGCCC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNWGVEG*SLAILP
Trigger: GGGCAATATAGCAAGACTCCACCCCTCCACACCCCA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCACTTTGTACTTGTATaGCTTCTGGCAACTTACTTA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGHFVLV*LLATYL
Trigger: TAAGTAAGTTGCCAGAAGCCATACAAGTACAAAGTG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTCAGGAATGAAAACATaGCAGACACAAAACATGGAA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGSGMKT*QTQNME
Trigger: TTCCATGTTTTGTGTCTGCCATGTTTTCATTCCTGA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCTGTTTACGGCTAACTaGATAACTGAGAGACTTGTC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTLFTAN*ITERLV
Trigger: GACAAGTCTCTCAGTTATCCAGTTAGCCGTAAACAG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGGTGAGGAACTCTTGTaGGTGCAGCAAGTACTCGAT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILGEELL*VQQVLD
Trigger: ATCGAGTACTTGCTGCACTCACAAGAGTTCCTCACC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTGCCCACGCTGGTCTTaGACTCCTGTGCTCAAGTTA +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNCPRWS*TPVLKL
Trigger: TAACTTGAGCACAGGAGTTCAAGACCAGCGTGGGCA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGATATTGGTCATGGTTaGCTGAGGAGCCAATTAAAA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTDIGHG*LRSQLK
Trigger: TTTTAATTGGCTCCTCAGTCAACCATGACCAATATC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATTCATGATGTTCTCCTaGAGCGTCAGCACGTCCACA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILFMMFS*SVSTST
Trigger: TGTGGACGTGCTGACGCTGCAGGAGAACATCATGAA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGCCTCGATCATCAGCTaGTGGGTGGAGATCATCTTC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNASIIS*WVEIIF
Trigger: GAAGATGATCTCCACCCAGCAGCTGATGATCGAGGC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGAGCTTCTCAATCTGTaGATTTTTCTGATACTCAAA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGELLNL*IFLILK
Trigger: TTTGAGTATCAGAAAAATGCACAGATTGAGAAGCTC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATGCTCCTGGAGTCTCTaGCCTAGCTCTTCTATCCTT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILCSWSL*PSSSIL
Trigger: AAGGATAGAAGAGCTAGGGCAGAGACTCCAGGAGCA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATGGATGTACATGTGTCTGTGAGTGTAGACATGAAAGGTATGGAAACCAAAGTAATAATCAGCTCATTCTaGTCCTGGAGTCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: MDVHVSVSVDMKGMETKVIISSF*SWSLCP
Trigger: AGGGCAGAGACTCCAGGAGCAGAATGAGCTGATTAT...TACTTTGGTTTCCATACCTTTCATGTCTACACTCACAGACACATGTACATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTGTTCTTCCCGAAGCTaGCCTTGTTTTGTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNCSSRS*PCFVVA
Trigger: CGCCACCACAAAACAAGGGCAGCTTCGGGAAGAACA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTTTAACGGCGACTCCTaGGGGCTTGGGAGAATCATC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNFNGDS*GLGRII
Trigger: GATGATTCTCCCAAGCCCGCAGGAGTCGCCGTTAAA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTGTTTTCATAAACGATaGTGTGATGAAGACTCATGT +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGCFHKR*CDEDSC
Trigger: ACATGAGTCTTCATCACAGCATCGTTTATGAAAACA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTATTCTCTTTGATGTATaGAGAGAGTTACGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTILFDV*RELRSR
Trigger: CCTGCTACGTAACTCTCTGCATACATCAAAGAGAAT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATCTGGGGGCCTCCAGTaGTTACCACAGAGATCAATA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILSGGLQ*LPQRSI
Trigger: TATTGATCTCTGTGGTAACCACTGGAGGCCCCCAGA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTTTCTATGGGTCTTCTaGGGGCCTCCAGTGGTTACC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNFLWVF*GPPVVT
Trigger: GGTAACCACTGGAGGCCCCCAGAAGACCCATAGAAA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTCATCAGCTGCTGGGTaGAGATCATCTTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNSSAAG*RSSSSG
Trigger: GCCGGAAGAAGATGATCTCCACCCAGCAGCTGATGA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGAAATCCTGGGGATATaGAGAACGGTCTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTEILGI*RTVFFK
Trigger: TTTAAAGAAGACCGTTCTCCATATCCCCAGGATTTC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGAAGTTGTATCATTTTaGGTACTTCTCCAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGEVVSF*VLLQLK
Trigger: TTTCAACTGGAGAAGTACCCAAAATGATACAACTTC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTATTAGTTCCACCGACTaGTTTGTTCACATTTTTGCG +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTISSTD*FVHIFA
Trigger: CGCAAAAATGTGAACAAACCAGTCGGTGGAACTAAT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTTCATTTTTCGCAGGTaGAGGTTCCTTCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTFIFRR*RFLLFF
Trigger: AAAGAACAGAAGGAACCTCCACCTGCGAAAAATGAA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTTTTCAATACTGTATTaGGTGCCATTAAAGAGACCA +
Preference number: 4 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGFSILY*VPLKRP
Trigger: TGGTCTCTTTAATGGCACCCAATACAGTATTGAAAA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCTAGTGTTCCATTATTaGAACACTAAGCATGTGGGA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTLVFHY*NTKHVG
Trigger: TCCCACATGCTTAGTGTTCCAATAATGGAACACTAG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATAGGATGAAACGTGTCTaGTCTGGGCAAGTTGTGGCG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNRMKRV*SGQVVA
Trigger: CGCCACAACTTGCCCAGACCAGACACGTTTCATCCT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCAAAGTGTGCAGGGCTaGGGCATTCACTTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNQSVQG*GIHFGF
Trigger: GAACCCAAAGTGAATGCCCCAGCCCTGCACACTTTG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361156.7
ENST00000361396.6
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGGTGAGGAACTCTTGTaGGTGCAGCAAGTACTCGAT +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNGEELL*VQQVLD
Trigger: ATCGAGTACTTGCTGCACTCACAAGAGTTCCTCACC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTTAATCTGCTGTCTCTaGGTTATAATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTLICCL*VIISSF
Trigger: GAATGAGCTGATTATAACTCAGAGACAGCAGATTAA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp CATCTATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTTTCCTTTGGGTTCACTaGTACTGTTTAATGGATTAC +
Preference number: 4 (lower is better)
Translates to: HLSLRFEVSLYVTGADPSFLWVH*YCLMDY
Trigger: GTAATCCATTAAACAGTATCAGTGAACCCAAAGGAA...AGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGATAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTCCTTTTTCTTCCTCTaGAAGTTCTTCTATTGGTTC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTSFFFL*KFFYWF
Trigger: GAACCAATAGAAGAACTTTCAGAGGAAGAAAAAGGA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTATTTTACAGCTGACTTaGTGTTCAAGGAATTCTCGA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTILQLT*CSRNSR
Trigger: TCGAGAATTCCTTGAACATCAAGTCAGCTGTAAAAT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTCTGGAATAATCTTCTaGCATGTGGAATTAGACATC +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTSGIIF*HVELDI
Trigger: GATGTCTAATTCCACATGTCAGAAGATTATTCCAGA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTATGGAGGCAAATTACTaGAACACTGTGATACTGAAA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTMEANY*NTVILK
Trigger: TTTCAGTATCACAGTGTTTCAGTAATTTGCCTCCAT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCAGCCACAGTCACAGTaGTGTAACAGAGGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNQPQSQ*CNRGLY
Trigger: GTAAAGCCCTCTGTTACATCACTGTGACTGTGGCTG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp GCTTTCCTGACTATCAAGAAGCTGCATGACATTATGGAAATCCTGGGGATATGGATCTGTGCATTTTTCTaGTACTATGCAGATGTACAC +
Preference number: 4 (lower is better)
Translates to: AFLTIKKLHDIMEILGIWICAFF*YYADVH
Trigger: GTGTACATCTGCATAGTATCAGAAAAATGCACAGAT...CCATATCCCCAGGATTTCCATAATGTCATGCAGCTTCTTGATAGTCAGGAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR TCA 90 bp CATCTATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTACCTTTTTCTTCCTCTaGAAGTTCTTCTATTGGTTC +
Preference number: 4 (lower is better)
Translates to: HLSLRFEVSLYVTGADPSTFFFL*KFFYWF
Trigger: GAACCAATAGAAGAACTTTCAGAGGAAGAAAAAGGT...AGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGATAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAGGAACTCTTGTGAGTaGAGCAAGTACTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILRNSCE*SKYSMV
Trigger: CACCATCGAGTACTTGCTGCACTCACAAGAGTTCCT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTCAGACCTGGTGAGCTaGAGCTCTTCCTTCAATACG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNSDLVS*SSSFNT
Trigger: CGTATTGAAGGAAGAGCTGCAGCTCACCAGGTCTGA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATAGGTCGTCGTCCTCCTaGTCCTCCTCTGAACTAAAA +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNRSSSS*SSSELK
Trigger: TTTTAGTTCAGAGGAGGAGCAGGAGGACGACGACCT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGGTCTTGAACTCCTGTaGTCAAGTTATCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNGLELL*SSYPPT
Trigger: GGTGGGAGGATAACTTGAGCACAGGAGTTCAAGACC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATATGGCCATATCCACATaGCCATGGCCACTCAGTAGA +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNMAIST*PWPLSR
Trigger: TCTACTGAGTGGCCATGGGCATGTGGATATGGCCAT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATTAGTTTCCAAAGTGTaGAGGGCTGGGGCATTCACT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILLVSKV*RAGAFT
Trigger: AGTGAATGCCCCAGCCCTGCACACTTTGGAAACTAA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361156.7
ENST00000361396.6
CDS-3UTR GCA 90 bp ATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTCTTTCGAGCTTCTCAATCTGTaGATTTTTCTGATACTATGC +
Preference number: 4 (lower is better)
Translates to: IIEVRSFSICDRSRPFSFELLNL*IFLILC
Trigger: GCATAGTATCAGAAAAATGCACAGATTGAGAAGCTC...GAAAGAGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACGGGGAATTCCTGCTTaGACCAGACATCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILRGIPA*TRHQEF
Trigger: AAATTCCTGATGTCTGGTCCAAGCAGGAATTCCCCG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTCTGGGGGCCTCCAGTaGTTACCACAGAGATCAATA +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNSGGLQ*LPQRSI
Trigger: TATTGATCTCTGTGGTAACCACTGGAGGCCCCCAGA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATCGATCATCAGCTGCTaGGTGGAGATCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILSIISC*VEIIFF
Trigger: GAAGAAGATGATCTCCACCCAGCAGCTGATGATCGA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGGCACTGGTAATAGTTaGCTTTGGCCTCGATCATCA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILGTGNS*LWPRSS
Trigger: TGATGATCGAGGCCAAAGCCAACTATTACCAGTGCC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCTTTGTAGAAAAGCTTaGTTCATAAAGGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTLCRKA*FIKALS
Trigger: TGACAAGGCCTTTATGAACCAAGCTTTTCTACAAAG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATATTCATAGGCACAGCTaGAGCAGCTGGCTGAGATTC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNIHRHS*SSWLRF
Trigger: GAATCTCAGCCAGCTGCTCCAGCTGTGCCTATGAAT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347108.7
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGAACAAAGTGGCACATaGGCCATCTTAGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNEQSGT*AILGLV
Trigger: CACCAAGCCTAAGATGGCCCATGTGCCACTTTGTTC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGTCCATTTGCTTTCCTaGCTATCAAGAAGCTGCATG +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILVHLLS*LSRSCM
Trigger: CATGCAGCTTCTTGATAGTCAGGAAAGCAAATGGAC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGGATGTACATGTGTCTGTGAGTGTAGACATGAAAGGTATGGAAACCAAAGTACACCATTGGCAGACTTaGTTTAGTTTCCAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: MDVHVSVSVDMKGMETKVHHWQT*FSFQSV
Trigger: CACACTTTGGAAACTAAATCAAGTCTGCCAATGGTG...TACTTTGGTTTCCATACCTTTCATGTCTACACTCACAGACACATGTACATCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAGGGGTCGTAATAGTTaGAGACTTTCTGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILRGRNS*RLSGKR
Trigger: CCTTTTCCCAGAAAGTCTTCAACTATTACGACCCCT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGTGGAATTAGACATCTaGAGTGTCGCTCCAATCAGT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILVELDI*SVAPIS
Trigger: ACTGATTGGAGCGACACTTCAGATGTCTAATTCCAC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATGCTCCAGGGATTTCTaGAAAAAGACACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILCSRDF*KKTQAS
Trigger: AGAAGCCTGTGTCTTTTTTCAGAAATCCCTGGAGCA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGGCATCAGCAGAAGCTaGGATAGAGATATTGGTCAT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILGISRS*DRDIGH
Trigger: ATGACCAATATCTCTATCTCAGCTTCTGCTGATGCC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGACTGTAATTCATTATaGCTGCTCCAGGAAGGGCTA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILDCNSL*LLQEGL
Trigger: TAGCCCTTCCTGGAGCAGTCATAATGAATTACAGTC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAGCATGGGGGCAATCTaGGAATATTCCTCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILSMGAI*EYSSKG
Trigger: ACCTTTTGAGGAATATTCTCAGATTGCCCCCATGCT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGTCCATTTGCTTTCCTGACTATCAAGAAGCTGCATGACATTATGGAAATCCTGATGCAGATGTACACATaGCTGAATGGATGTACATGT +
Preference number: 4 (lower is better)
Translates to: CPFAFLTIKKLHDIMEILMQMYT*LNGCTC
Trigger: ACATGTACATCCATTCAGTCATGTGTACATCTGCAT...CAGGATTTCCATAATGTCATGCAGCTTCTTGATAGTCAGGAAAGCAAATGGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATAGGAACTCTTGTGAGTaGAGCAAGTACTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNRNSCE*SKYSMV
Trigger: CACCATCGAGTACTTGCTGCACTCACAAGAGTTCCT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGAGCTTCTCAATCTGTaGATTTTTCTGATACTCAAA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTELLNL*IFLILK
Trigger: TTTGAGTATCAGAAAAATGCACAGATTGAGAAGCTC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATATAATCAGCTCATTCTaGTCCTGGAGTCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNIISSF*SWSLCP
Trigger: AGGGCAGAGACTCCAGGAGCAGAATGAGCTGATTAT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATTAGTTTCCAAAGTGTaGAGGGCTGGGGCATTCATA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILLVSKV*RAGAFI
Trigger: TATGAATGCCCCAGCCCTGCACACTTTGGAAACTAA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347108.7
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGAGAATGCCTGTTCATaGACCATTGGCAGACTTGAT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILENACS*TIGRLD
Trigger: ATCAAGTCTGCCAATGGTGCATGAACAGGCATTCTC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTATGTGCGACGAGAATaGCTGTTCATGCACCATTGG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNYVRRE*LFMHHW
Trigger: CCAATGGTGCATGAACAGGCATTCTCGTCGCACATA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAATTGGTTCCAGTATGTaGGACGAGAATGCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILIGSSM*DENACS
Trigger: TGAACAGGCATTCTCGTCGCACATACTGGAACCAAT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCATTTAATAGTAACATaGTTACAGTGGCTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTHLIVT*LQWLKA
Trigger: AGCTTTGAGCCACTGTAAGCATGTTACTATTAAATG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTGTTTTCATAAACGATaGTGTGATGAAGACTCATGT +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTCFHKR*CDEDSC
Trigger: ACATGAGTCTTCATCACAGCATCGTTTATGAAAACA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCGGGGAATTCCTGCTTaGACCAGACATCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNRGIPA*TRHQEF
Trigger: AAATTCCTGATGTCTGGTCCAAGCAGGAATTCCCCG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGGTAATAGTTGGCTTTaGCCTCGATCATCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNGNSWL*PRSSAA
Trigger: AGCAGCTGATGATCGAGGCCAAAGCCAACTATTACC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAAGTCCTTCTCCCTTTaGCCCCTTAGGATTAAATGC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILKSFSL*PLRIKC
Trigger: GCATTTAATCCTAAGGGGCCAAAGGGAGAAGGACTT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTTTTCAATACTGTATTaGGTGCCATTAAAGAGACCA +
Preference number: 4 (lower is better)
Translates to: RATVITVHTHLSCPVSLTFSILY*VPLKRP
Trigger: TGGTCTCTTTAATGGCACCCAATACAGTATTGAAAA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGTCCATTTGCTTTCCTaGCTATCAAGAAGCTGCATG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNVHLLS*LSRSCM
Trigger: CATGCAGCTTCTTGATAGTCAGGAAAGCAAATGGAC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAGTACTCTATGCAACTaGTCACTTGAAATGCCACGT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILSTLCN*SLEMPR
Trigger: ACGTGGCATTTCAAGTGATCAGTTGCATAGAGTACT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATAGGGGTCGTAATAGTTaGAGACTTTCTGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNRGRNS*RLSGKR
Trigger: CCTTTTCCCAGAAAGTCTTCAACTATTACGACCCCT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGTGGAATTAGACATCTaGAGTGTCGCTCCAATCAGT +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNVELDI*SVAPIS
Trigger: ACTGATTGGAGCGACACTTCAGATGTCTAATTCCAC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGTGAGTATATCTGCATaGAATGGCCCCTATAGGAAG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNVSISA*NGPYRK
Trigger: CTTCCTATAGGGGCCATTTCATGCAGATATACTCAC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGACTGTAATTCATTATaGCTGCTCCAGGAAGGGCTA +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNDCNSL*LLQEGL
Trigger: TAGCCCTTCCTGGAGCAGTCATAATGAATTACAGTC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACTCGAGCTGTCCATTTaGTTTCCTGACTATCAAGAA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILLELSI*FPDYQE
Trigger: TTCTTGATAGTCAGGAAAGCAAATGGACAGCTCGAG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGAGAATGCCTGTTCATaGACCATTGGCAGACTTGAT +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNENACS*TIGRLD
Trigger: ATCAAGTCTGCCAATGGTGCATGAACAGGCATTCTC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATATTGGTTCCAGTATGTaGGACGAGAATGCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNIGSSM*DENACS
Trigger: TGAACAGGCATTCTCGTCGCACATACTGGAACCAAT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTTCCCCAAGCTCTTCTaGTCAGGAATGAAAACATGG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNFPKLF*SGMKTW
Trigger: CCATGTTTTCATTCCTGAGCAGAAGAGCTTGGGGAA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGGATGTACATGTGTCTGTGAGTGTAGACATGAAAGGTATGGAAACCAAAGTAGAAATCCTGGGGATATaGAGAACGGTCTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: MDVHVSVSVDMKGMETKVEILGI*RTVFFK
Trigger: TTTAAAGAAGACCGTTCTCCATATCCCCAGGATTTC...TACTTTGGTTTCCATACCTTTCATGTCTACACTCACAGACACATGTACATCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAACATTATGGAAATCCTaGGGATATGGAGAACGGTCT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILTLWKS*GYGERS
Trigger: AGACCGTTCTCCATATCCCCAGGATTTCCATAATGT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAGCTGCATGACATTATaGAAATCCTGGGGATATGGA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILSCMTL*KSWGYG
Trigger: TCCATATCCCCAGGATTTCCATAATGTCATGCAGCT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGGACAGAATGTCATATaGCATAGCAATCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNGQNVI*HSNQGQ
Trigger: CTGGCCTTGATTGCTATGCCATATGACATTCTGTCC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCAGAAACACATTAGTTaGGCATCAGTAAGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNQKHIS*ASVRGN
Trigger: GTTGCCCCTTACTGATGCCCAACTAATGTGTTTCTG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTTATTGCCTGTCATGTaGCACATCCATGTTAAGGGG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNLLPVM*HIHVKG
Trigger: CCCCTTAACATGGATGTGCCACATGACAGGCAATAA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTGCCTATGTTGGACTTaGTCTGCATATTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNCLCWT*SAYWTS
Trigger: AGAAGTCCAATATGCAGATCAAGTCCAACATAGGCA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCACCATTGGCAGACTTaGTTTAGTTTCCAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNHHWQT*FSFQSV
Trigger: CACACTTTGGAAACTAAATCAAGTCTGCCAATGGTG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATAGTACTCTATGCAACTaGTCACTTGAAATGCCACGT +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNSTLCN*SLEMPR
Trigger: ACGTGGCATTTCAAGTGATCAGTTGCATAGAGTACT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACAGGCATTTAGCACATaGGCAAAATGTGGTTCATTT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILQAFST*AKCGSF
Trigger: AAATGAACCACATTTTGCTCATGTGCTAAATGCCTG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCTTAAAGTCTCCCCTTaGCACTTTGTACTTGTATGG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNLKVSP*HFVLVW
Trigger: CCATACAAGTACAAAGTGTCAAGGGGAGACTTTAAG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGATATTGGTCATGGTTaGCTGAGGAGCCAATTAAAA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILDIGHG*LRSQLK
Trigger: TTTTAATTGGCTCCTCAGTCAACCATGACCAATATC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATTCTCCATCAAGTTCTaGTCCACCATTGTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILFSIKF*STIVLS
Trigger: ACTAAGAACAATGGTGGAGCAGAACTTGATGGAGAA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAATGCCACGTATATCTaGATTAATCCCCAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILNATYI*INPQGF
Trigger: GAAACCTTGGGGATTAATGCAGATATACGTGGCATT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACCATTTGAGAAACACTaGACTGATCTGAAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILPFEKH*TDLKRV
Trigger: TACTCTCTTCAGATCAGTGCAGTGTTTCTCAAATGG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAATTCTCTTTGATGTATaGAGAGAGTTACGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILILFDV*RELRSR
Trigger: CCTGCTACGTAACTCTCTGCATACATCAAAGAGAAT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATAGCTGCATGACATTATaGAAATCCTGGGGATATGGA +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNSCMTL*KSWGYG
Trigger: TCCATATCCCCAGGATTTCCATAATGTCATGCAGCT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATTCATTTTTCGCAGGTaGAGGTTCCTTCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILFIFRR*RFLLFF
Trigger: AAAGAACAGAAGGAACCTCCACCTGCGAAAAATGAA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGTAACATGCTTACAGTaGCTCAAAGCTGAATGTGAC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNVTCLQ*LKAECD
Trigger: GTCACATTCAGCTTTGAGCCACTGTAAGCATGTTAC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGGCAACATAAAGGAATaGTTCCCCTCAAAAACGAAC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNGNIKE*FPSKTN
Trigger: GTTCGTTTTTGAGGGGAACCATTCCTTTATGTTGCC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACTAGTGTTCCATTATTaGAACACTAAGCATGTGGGA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILLVFHY*NTKHVG
Trigger: TCCCACATGCTTAGTGTTCCAATAATGGAACACTAG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR CAA 72 bp TCACTCACTCCTCACAGCCATCCTAGGAGATACATATaGTTTTCATCCTGCATTTACAGAAAAAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: SLTPHSHPRRYI*FSSCIYRKRNE
Trigger: TTCATTTCTTTTTCTGTAAATGCAGGATGAAAACAATATGTATCTCCTAGGATGGCTGTGAGGAGTGAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR CAA 72 bp TCTTTAAACTCGTGTGCATCTTTTAATGTGCCTATGTaGGACTTGATCTGCATATTGGACTTCTGGATTTCT +
Preference number: 4 (lower is better)
Translates to: SLNSCASFNVPM*DLICILDFWIS
Trigger: AGAAATCCAGAAGTCCAATATGCAGATCAAGTCCAACATAGGCACATTAAAAGATGCACACGAGTTTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCAGGCATTTAGCACATaGGCAAAATGTGGTTCATTT +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNQAFST*AKCGSF
Trigger: AAATGAACCACATTTTGCTCATGTGCTAAATGCCTG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATCTGGAATAATCTTCTaGCATGTGGAATTAGACATC +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILSGIIF*HVELDI
Trigger: GATGTCTAATTCCACATGTCAGAAGATTATTCCAGA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAATGGAGGCAAATTACTaGAACACTGTGATACTGAAA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILMEANY*NTVILK
Trigger: TTTCAGTATCACAGTGTTTCAGTAATTTGCCTCCAT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATAATGCCACGTATATCTaGATTAATCCCCAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNNATYI*INPQGF
Trigger: GAAACCTTGGGGATTAATGCAGATATACGTGGCATT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCCATTTGAGAAACACTaGACTGATCTGAAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNPFEKH*TDLKRV
Trigger: TACTCTCTTCAGATCAGTGCAGTGTTTCTCAAATGG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATATTAGTTCCACCGACTaGTTTGTTCACATTTTTGCG +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNISSTD*FVHIFA
Trigger: CGCAAAAATGTGAACAAACCAGTCGGTGGAACTAAT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGAAGCACTAGAATCATaGAGGCAAATTACTGAAACA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILEALES*RQITET
Trigger: TGTTTCAGTAATTTGCCTCCATGATTCTAGTGCTTC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTTTAGAGGGCAGGAATaGGCTACAAGTAAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNFRGQE*ATSKKD
Trigger: ATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATATTTTACAGCTGACTTaGTGTTCAAGGAATTCTCGA +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNILQLT*CSRNSR
Trigger: TCGAGAATTCCTTGAACATCAAGTCAGCTGTAAAAT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR TCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTCACTTTGGGTTCACTaGTACTGTTTAATGGATTAC +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNSLWVH*YCLMDY
Trigger: GTAATCCATTAAACAGTATCAGTGAACCCAAAGTGA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361156.7
ENST00000361396.6
CDS-3UTR GCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATGTTTTCATAAACGATaGTGTGATGAAGACTCATGT +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILCFHKR*CDEDSC
Trigger: ACATGAGTCTTCATCACAGCATCGTTTATGAAAACA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCTTTGTAGAAAAGCTTaGTTCATAAAGGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNLCRKA*FIKALS
Trigger: TGACAAGGCCTTTATGAACCAAGCTTTTCTACAAAG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CCA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGAAGTTGTATCATTTTaGGTACTTCTCCAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILEVVSF*VLLQLK
Trigger: TTTCAACTGGAGAAGTACCCAAAATGATACAACTTC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
3UTR CAA 72 bp TATAGAAAACATTGCTTGCATTTAGATCATCTATCATaGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: YRKHCLHLDHLS*RFEVSLYVTGA
Trigger: GGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGATAGATGATCTAAATGCAAGCAATGTTTTCTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR GCA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGAGCTTCTCAATCTGTaGATTTTTCTGATACTCAAA +
Preference number: 4 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNELLNL*IFLILK
Trigger: TTTGAGTATCAGAAAAATGCACAGATTGAGAAGCTC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS GCA 90 bp CGCTTCCGCGGCGGCGGCGGCCTAAGGTCTGGGCGTCCAGGACGTTaGTATAGCAGCGCCCAGGTCCGGACCTGGAGCAAAGGGCGCGTC +
Preference number: 5 (lower is better)
Translates to: RFRGGGGLRSGRPGR*YSSAQVRTWSKGRV
Trigger: GACGCGCCCTTTGCTCCAGGTCCGGACCTGGGCGCTGCTATAGCAACGTCCTGGACGCCCAGACCTTAGGCCGCCGCCGCCGCGGAAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS CCA 90 bp TCTGGGCGTCCAGGACGTTGCTATAGCAGCGCCCAGGTCCGGACCTaGAGCAAAGGGCGCGTCTGCCCGCGCAGGGTCAGCGTGCACCCA +
Preference number: 5 (lower is better)
Translates to: SGRPGRCYSSAQVRT*SKGRVCPRRVSVHP
Trigger: TGGGTGCACGCTGACCCTGCGCGGGCAGACGCGCCCTTTGCTCCAGGTCCGGACCTGGGCGCTGCTATAGCAACGTCCTGGACGCCCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS CCA 90 bp CCCGCCTGCTTGGTGAGCAGCTTCTTGCTCTGCTCGCCGTCGCAGTaGCTCAGGCGCAGCCGCTCCTCCAGGGTGTGCAGCTGCGAGGTG +
Preference number: 5 (lower is better)
Translates to: PACLVSSFLLCSPSQ*LRRSRSSRVCSCEV
Trigger: CACCTCGCAGCTGCACACCCTGGAGGAGCGGCTGCGCCTGAGCCACTGCGACGGCGAGCAGAGCAAGAAGCTGCTCACCAAGCAGGCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS GCA 90 bp AGCGTCTTGATCTCCCCCGCCTGCTTGGTGAGCAGCTTCTTGCTCTaGTCGCCGTCGCAGTGGCTCAGGCGCAGCCGCTCCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: SVLISPACLVSSFLL*SPSQWLRRSRSSRV
Trigger: CACCCTGGAGGAGCGGCTGCGCCTGAGCCACTGCGACGGCGAGCAGAGCAAGAAGCTGCTCACCAAGCAGGCGGGGGAGATCAAGACGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CCA 90 bp GAGGCAGGCCGGCTCCTTCTTGCAGGGCGCAGGATGAAACGTGTCTaGTCTGGGCAAGTTGTGGCGAGGCGGGTCGACTGGCGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: EAGRLLLAGRRMKRV*SGQVVARRVDWRRS
Trigger: AGAGCGGCGCCAGTCGACCCGCCTCGCCACAACTTGCCCAGACCAGACACGTTTCATCCTGCGCCCTGCAAGAAGGAGCCGGCCTGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS GCA 90 bp TGCTATAGCAGCGCCCAGGTCCGGACCTGGAGCAAAGGGCGCGTCTaGCCGCGCAGGGTCAGCGTGCACCCAGAACCCTTACAAACTTGG +
Preference number: 5 (lower is better)
Translates to: CYSSAQVRTWSKGRV*PRRVSVHPEPLQTW
Trigger: CCAAGTTTGTAAGGGTTCTGGGTGCACGCTGACCCTGCGCGGGCAGACGCGCCCTTTGCTCCAGGTCCGGACCTGGGCGCTGCTATAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS GCA 90 bp TGCTCGCCGTCGCAGTGGCTCAGGCGCAGCCGCTCCTCCAGGGTGTaGAGCTGCGAGGTGAGGAACTCTTGTGAGTGCAGCAAGTACTCG +
Preference number: 5 (lower is better)
Translates to: CSPSQWLRRSRSSRV*SCEVRNSCECSKYS
Trigger: CGAGTACTTGCTGCACTCACAAGAGTTCCTCACCTCGCAGCTGCACACCCTGGAGGAGCGGCTGCGCCTGAGCCACTGCGACGGCGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CCA 90 bp ATGAAACGTGTCTGGTCTGGGCAAGTTGTGGCGAGGCGGGTCGACTaGCGCCGCTCTAGGGCCTTCCAGACTCCGGACCACGGACGACTC +
Preference number: 5 (lower is better)
Translates to: MKRVWSGQVVARRVD*RRSRAFQTPDHGRL
Trigger: GAGTCGTCCGTGGTCCGGAGTCTGGAAGGCCCTAGAGCGGCGCCAGTCGACCCGCCTCGCCACAACTTGCCCAGACCAGACACGTTTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS GCA 90 bp AGGCCGAGGAGCAGCAAAGCGGAGAGAGGCAGGCCGGCTCCTTCTTaGAGGGCGCAGGATGAAACGTGTCTGGTCTGGGCAAGTTGTGGC +
Preference number: 5 (lower is better)
Translates to: RPRSSKAERGRPAPS*RAQDETCLVWASCG
Trigger: GCCACAACTTGCCCAGACCAGACACGTTTCATCCTGCGCCCTGCAAGAAGGAGCCGGCCTGCCTCTCTCCGCTTTGCTGCTCCTCGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS CCA 90 bp TGCGCCAGACGGATGAGCTTCAGCAGCACCGGGTCCACCCCCGACTaGCAGTGTGGGCACTTCTCGTCTTCCAGCTTGCAGAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: CARRMSFSSTGSTPD*QCGHFSSSSLQKVM
Trigger: CATCACCTTCTGCAAGCTGGAAGACGAGAAGTGCCCACACTGCCAGTCGGGGGTGGACCCGGTGCTGCTGAAGCTCATCCGTCTGGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CCA 90 bp GTTCTTCCCGAAGCTGCCCTTGTTTTGTGGTGGCGGCACAGGAAGTaGGCCTGGGGATGCGTATGCCCGGATGAGGTCGTCGTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: VLPEAALVLWWRHRK*AWGCVCPDEVVVLL
Trigger: CAGGAGGACGACGACCTCATCCGGGCATACGCATCCCCAGGCCCACTTCCTGTGCCGCCACCACAAAACAAGGGCAGCTTCGGGAAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000485031.5
CDS GCA 90 bp TGCTTCTGGAAGGGCATGCTTGAAAACCAATCCGCTGCCTCAGCTTaGATAGGAGGAGCCGGGCGGTCTTTACCCAGCCTGGGCCGCCTC +
Preference number: 5 (lower is better)
Translates to: CFWKGMLENQSAASA*IGGAGRSLPSLGRL
Trigger: GAGGCGGCCCAGGCTGGGTAAAGACCGCCCGGCTCCTCCTATGCAAGCTGAGGCAGCGGATTGGTTTTCAAGCATGCCCTTCCAGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS GCA 90 bp TTCCGGCGTTTGCACTCTTCCTTGAGCGTCTTGATCTCCCCCGCCTaGTTGGTGAGCAGCTTCTTGCTCTGCTCGCCGTCGCAGTGGCTC +
Preference number: 5 (lower is better)
Translates to: FRRLHSSLSVLISPA*LVSSFLLCSPSQWL
Trigger: GAGCCACTGCGACGGCGAGCAGAGCAAGAAGCTGCTCACCAAGCAGGCGGGGGAGATCAAGACGCTCAAGGAAGAGTGCAAACGCCGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS TCA 90 bp CAGCCGCTCCTCCAGGGTGTGCAGCTGCGAGGTGAGGAACTCTTGTaGGTGCAGCAAGTACTCGATGGTGAACTGCGCCAGACGGATGAG +
Preference number: 5 (lower is better)
Translates to: QPLLQGVQLRGEELL*VQQVLDGELRQTDE
Trigger: CTCATCCGTCTGGCGCAGTTCACCATCGAGTACTTGCTGCACTCACAAGAGTTCCTCACCTCGCAGCTGCACACCCTGGAGGAGCGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS GCA 90 bp CGCTCCTCCAGGGTGTGCAGCTGCGAGGTGAGGAACTCTTGTGAGTaGAGCAAGTACTCGATGGTGAACTGCGCCAGACGGATGAGCTTC +
Preference number: 5 (lower is better)
Translates to: RSSRVCSCEVRNSCE*SKYSMVNCARRMSF
Trigger: GAAGCTCATCCGTCTGGCGCAGTTCACCATCGAGTACTTGCTGCACTCACAAGAGTTCCTCACCTCGCAGCTGCACACCCTGGAGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS GCA 90 bp TTCTCGTCTTCCAGCTTGCAGAAGGTGATGTTCATGATGTTCTCCTaGAGCGTCAGCACGTCCACAGCCCCCGCCACCTTGTCCACGTCG +
Preference number: 5 (lower is better)
Translates to: FSSSSLQKVMFMMFS*SVSTSTAPATLSTS
Trigger: CGACGTGGACAAGGTGGCGGGGGCTGTGGACGTGCTGACGCTGCAGGAGAACATCATGAACATCACCTTCTGCAAGCTGGAAGACGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CCA 90 bp ACGGATGAGCTTCAGCAGCACCGGGTCCACCCCCGACTGGCAGTGTaGGCACTTCTCGTCTTCCAGCTTGCAGAAGGTGATGTTCATGAT +
Preference number: 5 (lower is better)
Translates to: TDELQQHRVHPRLAV*ALLVFQLAEGDVHD
Trigger: ATCATGAACATCACCTTCTGCAAGCTGGAAGACGAGAAGTGCCCACACTGCCAGTCGGGGGTGGACCCGGTGCTGCTGAAGCTCATCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CCA 90 bp TGGTGGCACCTTTCTCAGGTAATTCTCAGTGGGCACAAGTGCCTTTaGGGCTATGGCCAAGATGGCGGCGAGGCCAGAGGTTATACCCAC +
Preference number: 5 (lower is better)
Translates to: WWHLSQVILSGHKCL*GYGQDGGEARGYTH
Trigger: GTGGGTATAACCTCTGGCCTCGCCGCCATCTTGGCCATAGCCCCAAAGGCACTTGTGCCCACTGAGAATTACCTGAGAAAGGTGCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485031.5
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGACAGCCCCCGCCACCTaGTCCACGTCGATGGCGCTC +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGTAPAT*STSMAL
Trigger: GAGCGCCATCGACGTGGACAAGGTGGCGGGGGCTGT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGTTCATGCACCATTGGCAGACTTGATTTAGTTTCCAAAGTGTGCAGGGCTGGGACAGCCCCCGCCACCTaGTCCACGTCGATGGCGCTC +
Preference number: 5 (lower is better)
Translates to: CSCTIGRLDLVSKVCRAGTAPAT*STSMAL
Trigger: GAGCGCCATCGACGTGGACAAGGTGGCGGGGGCTGT...CCCAGCCCTGCACACTTTGGAAACTAAATCAAGTCTGCCAATGGTGCATGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTTGGTGAGCAGCTTCTaGCTCTGCTCGCCGTCGCAG +
Preference number: 5 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQLVSSF*LCSPSQ
Trigger: CTGCGACGGCGAGCAGAGCAAGAAGCTGCTCACCAA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGCGACTCCTGCGGGCTaGGGAGAATCATCAGTGTCC +
Preference number: 5 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQATPAG*GESSVS
Trigger: GGACACTGATGATTCTCCCAAGCCCGCAGGAGTCGC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS TCA 90 bp GGATGCGTATGCCCGGATGAGGTCGTCGTCCTCCTGCTCCTCCTCTaGACTAAAAGGAGGGGTCCTACACAAATCAACACCGAGATAGGG +
Preference number: 5 (lower is better)
Translates to: GCVCPDEVVVLLLLL*TKRRGPTQINTEIG
Trigger: CCCTATCTCGGTGTTGATTTGTGTAGGACCCCTCCTTTTAGTTCAGAGGAGGAGCAGGAGGACGACGACCTCATCCGGGCATACGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485031.5
CDS CCA 90 bp GATGTGCCTCTTAAAGTGGTGGCACCTTTCTCAGGTAATTCTCAGTaGGCACAAGTGCCTTTGGGGCTATGGCCAAGATGGCGGCGAGGC +
Preference number: 5 (lower is better)
Translates to: DVPLKVVAPFSGNSQ*AQVPLGLWPRWRRG
Trigger: GCCTCGCCGCCATCTTGGCCATAGCCCCAAAGGCACTTGTGCCCACTGAGAATTACCTGAGAAAGGTGCCACCACTTTAAGAGGCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485031.5
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGATCCGCTGCCTCAGCTaGCATAGGAGGAGCCGGGCG +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGIRCLS*HRRSRA
Trigger: CGCCCGGCTCCTCCTATGCAAGCTGAGGCAGCGGAT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGAAGCTGCCCTTGTTTaGTGGTGGCGGCACAGGAAG +
Preference number: 5 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQEAALV*WWRHRK
Trigger: CTTCCTGTGCCGCCACCACAAAACAAGGGCAGCTTC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTACAGCCCCCGCCACCTaGTCCACGTCGATGGCGCTC +
Preference number: 5 (lower is better)
Translates to: RATVITVHTHLSCPVSLTTAPAT*STSMAL
Trigger: GAGCGCCATCGACGTGGACAAGGTGGCGGGGGCTGT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTCTGGTCTGGGCAAGTaGTGGCGAGGCGGGTCGACT +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGSGLGK*WRGGST
Trigger: AGTCGACCCGCCTCGCCACAACTTGCCCAGACCAGA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCCGGGGAATTCCTGCTaGGACCAGACATCAGGAATT +
Preference number: 5 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQPGNSC*DQTSGI
Trigger: AATTCCTGATGTCTGGTCCAAGCAGGAATTCCCCGG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTCTGGAAGGGCATGCTaGAAAACCAATCCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQSGRAC*KTNPLP
Trigger: AGGCAGCGGATTGGTTTTCAAGCATGCCCTTCCAGA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTTGGTGAGCAGCTTCTaGCTCTGCTCGCCGTCGCAG +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGLVSSF*LCSPSQ
Trigger: CTGCGACGGCGAGCAGAGCAAGAAGCTGCTCACCAA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGATCTCCCCCGCCTGCTaGGTGAGCAGCTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGISPAC*VSSFLL
Trigger: GAGCAAGAAGCTGCTCACCAAGCAGGCGGGGGAGAT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGATCTTCTTCCGGCGTTaGCACTCTTCCTTGAGCGTC +
Preference number: 5 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQIFFRR*HSSLSV
Trigger: GACGCTCAAGGAAGAGTGCAAACGCCGGAAGAAGAT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTCTTCCTTGAGCGTCTaGATCTCCCCCGCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGSSLSV*ISPACL
Trigger: CAAGCAGGCGGGGGAGATCAAGACGCTCAAGGAAGA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTTCCCGAAGCTGCCCTaGTTTTGTGGTGGCGGCACA +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGFPKLP*FCGGGT
Trigger: TGTGCCGCCACCACAAAACAAGGGCAGCTTCGGGAA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GAGCTGCAGCTCTTCCTTCAATACGACGATCTCACTCCGGAGCTTCTCAATCTGCGCCTCTTACCATGCTaGAAAACCAATCCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: ELQLFLQYDDLTPELLNLRLLPC*KTNPLP
Trigger: AGGCAGCGGATTGGTTTTCAAGCATGGTAAGAGGCG...CAGATTGAGAAGCTCCGGAGTGAGATCGTCGTATTGAAGGAAGAGCTGCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CAA 90 bp GCTTTCCTGACTATCAAGAAGCTGCATGACATTATGGAAATCCTGGGGATATGGATCTCCCCCGCCTGCTaGGTGAGCAGCTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: AFLTIKKLHDIMEILGIWISPAC*VSSFLL
Trigger: GAGCAAGAAGCTGCTCACCAAGCAGGCGGGGGAGAT...CCATATCCCCAGGATTTCCATAATGTCATGCAGCTTCTTGATAGTCAGGAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCGTTTGCACTCTTCCTaGAGCGTCTTGATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGRLHSS*SVLISP
Trigger: GGGGGAGATCAAGACGCTCAAGGAAGAGTGCAAACG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGCGACTCCTGCGGGCTaGGGAGAATCATCAGTGTCC +
Preference number: 5 (lower is better)
Translates to: RATVITVHTHLSCPVSLTATPAG*GESSVS
Trigger: GGACACTGATGATTCTCCCAAGCCCGCAGGAGTCGC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGAGGCAGGAAAATCGCTaGAATCTGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGRQENR*NLGGGG
Trigger: ACCTCCGCCTCCCAGATTCAAGCGATTTTCCTGCCT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCCGGGGAATTCCTGCTaGGACCAGACATCAGGAATT +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGPGNSC*DQTSGI
Trigger: AATTCCTGATGTCTGGTCCAAGCAGGAATTCCCCGG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGAGAACCCTTACAAACTaGGGTCGGGGCTGCATTCTG +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGRTLTN*GRGCIL
Trigger: CAGAATGCAGCCCCGACCCAAGTTTGTAAGGGTTCT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTCTGGAAGGGCATGCTaGAAAACCAATCCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGSGRAC*KTNPLP
Trigger: AGGCAGCGGATTGGTTTTCAAGCATGCCCTTCCAGA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAACAGCCCCCGCCACCTaGTCCACGTCGATGGCGCTC +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILTAPAT*STSMAL
Trigger: GAGCGCCATCGACGTGGACAAGGTGGCGGGGGCTGT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TTATGGAAATCCTGGGGATATGGAGAACGGTCTTCTTTAAACTCGTGTGCATCTTTGGTGAGCAGCTTCTaGCTCTGCTCGCCGTCGCAG +
Preference number: 5 (lower is better)
Translates to: LWKSWGYGERSSLNSCASLVSSF*LCSPSQ
Trigger: CTGCGACGGCGAGCAGAGCAAGAAGCTGCTCACCAA...AGATGCACACGAGTTTAAAGAAGACCGTTCTCCATATCCCCAGGATTTCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CAA 90 bp CATCTATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTTCTTCCTTGAGCGTCTaGATCTCCCCCGCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: HLSLRFEVSLYVTGADPSSSLSV*ISPACL
Trigger: CAAGCAGGCGGGGGAGATCAAGACGCTCAAGGAAGA...AGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGATAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CAA 90 bp AGCTCTTCCTTCAATACGACGATCTCACTCCGGAGCTTCTCAATCTGTGCATTTCGTTTGCACTCTTCCTaGAGCGTCTTGATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: SSSFNTTISLRSFSICAFRLHSS*SVLISP
Trigger: GGGGGAGATCAAGACGCTCAAGGAAGAGTGCAAACG...AAATGCACAGATTGAGAAGCTCCGGAGTGAGATCGTCGTATTGAAGGAAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGCTGAAAGTTCTTCTATaGGTTCCAGTATGTGCGACG +
Preference number: 5 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQLKVLL*VPVCAT
Trigger: CGTCGCACATACTGGAACCAATAGAAGAACTTTCAG...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTGGGTACTTCTCCAGTaGAAAGGGTATCCATTTGAG +
Preference number: 5 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQWVLLQ*KGYPFE
Trigger: CTCAAATGGATACCCTTTCAACTGGAGAAGTACCCA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTTCCCGAAGCTGCCCTaGTTTTGTGGTGGCGGCACA +
Preference number: 5 (lower is better)
Translates to: RATVITVHTHLSCPVSLTFPKLP*FCGGGT
Trigger: TGTGCCGCCACCACAAAACAAGGGCAGCTTCGGGAA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGTTCCACCGACTGGTTaGTTCACATTTTTGCGATGT +
Preference number: 5 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQVPPTG*FTFLRC
Trigger: ACATCGCAAAAATGTGAACAAACCAGTCGGTGGAAC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTGGAGGGGTGGAGTCTaGCTATATTGCCCACGCTGG +
Preference number: 5 (lower is better)
Translates to: RATVITVHTHLSCPVSLTWRGGV*LYCPRW
Trigger: CCAGCGTGGGCAATATAGCAAGACTCCACCCCTCCA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGTCGAAACTAGGCCTTaGAACCAAGGCAGTCTAGGG +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGVETRP*NQGSLG
Trigger: CCCTAGACTGCCTTGGTTCAAAGGCCTAGTTTCGAC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGCCACACCATTCTCTTaGATGTATGCAGAGAGTTAC +
Preference number: 5 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQATPFS*MYAESY
Trigger: GTAACTCTCTGCATACATCAAAGAGAATGGTGTGGC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAATCCGCTGCCTCAGCTaGCATAGGAGGAGCCGGGCG +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILIRCLS*HRRSRA
Trigger: CGCCCGGCTCCTCCTATGCAAGCTGAGGCAGCGGAT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTGCATTTCATATTCCTaGGAGAATCTGACTGCACTG +
Preference number: 5 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQCISYS*ENLTAL
Trigger: CAGTGCAGTCAGATTCTCCAAGGAATATGAAATGCA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS CCA 90 bp CTGGGTAAGACAAATCATTTTGACAATCCTGGTAATAGTTGGCTTTaGCCTCGATCATCAGCTGCTGGGTGGAGATCATCTTCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: LGKTNHFDNPGNSWL*PRSSAAGWRSSSSG
Trigger: GCCGGAAGAAGATGATCTCCACCCAGCAGCTGATGATCGAGGCCAAAGCCAACTATTACCAGGATTGTCAAAATGATTTGTCTTACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466027.1
CDS-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCCGGGGAATTCCTGCTaGGACCAGACATCAGGAATT +
Preference number: 5 (lower is better)
Translates to: RATVITVHTHLSCPVSLTPGNSC*DQTSGI
Trigger: AATTCCTGATGTCTGGTCCAAGCAGGAATTCCCCGG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATATCCGCTGCCTCAGCTaGCATAGGAGGAGCCGGGCG +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNIRCLS*HRRSRA
Trigger: CGCCCGGCTCCTCCTATGCAAGCTGAGGCAGCGGAT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTTCTCGTCTTCCAGCTaGCAGAAGGTGATGTTCATG +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGFSSSS*QKVMFM
Trigger: CATGAACATCACCTTCTGCAAGCTGGAAGACGAGAA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TCTATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTCTATCTTCTTCCGGCGTTaGCACTCTTCCTTGAGCGTC +
Preference number: 5 (lower is better)
Translates to: SIIEVRSFSICDRSRPFSIFFRR*HSSLSV
Trigger: GACGCTCAAGGAAGAGTGCAAACGCCGGAAGAAGAT...AGAGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTTCTTGATGAATAGCTaGAACTCGAGCTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQFLMNS*NSSCPF
Trigger: AAATGGACAGCTCGAGTTCAAGCTATTCATCAAGAA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTATGCAACTGATCACTaGAAATGCCACGTATATCTG +
Preference number: 5 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQYATDH*KCHVYL
Trigger: CAGATATACGTGGCATTTCAAGTGATCAGTTGCATA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTCTCCCCTTGACACTTaGTACTTGTATGGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGSPLDT*YLYGFW
Trigger: CCAGAAGCCATACAAGTACAAAGTGTCAAGGGGAGA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGGGGCCAATATATTATaGCCTGTCATGTGGCACATC +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGGANIL*PVMWHI
Trigger: GATGTGCCACATGACAGGCAATAATATATTGGCCCC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS CCA 90 bp GGCCTTCTGGGTAAGACAAATCATTTTGACAATCCTGGTAATAGTTaGCTTTGGCCTCGATCATCAGCTGCTGGGTGGAGATCATCTTCT +
Preference number: 5 (lower is better)
Translates to: GLLGKTNHFDNPGNS*LWPRSSAAGWRSSS
Trigger: AGAAGATGATCTCCACCCAGCAGCTGATGATCGAGGCCAAAGCCAACTATTACCAGGATTGTCAAAATGATTTGTCTTACCCAGAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466027.1
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATTGGTGAGCAGCTTCTaGCTCTGCTCGCCGTCGCAG +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILLVSSF*LCSPSQ
Trigger: CTGCGACGGCGAGCAGAGCAAGAAGCTGCTCACCAA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAATCTCCCCCGCCTGCTaGGTGAGCAGCTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILISPAC*VSSFLL
Trigger: GAGCAAGAAGCTGCTCACCAAGCAGGCGGGGGAGAT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTGGTTCATAAAGGCCTaGTCACAAAAATGGCACTGG +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGWFIKA*SQKWHW
Trigger: CCAGTGCCATTTTTGTGACAAGGCCTTTATGAACCA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGTTTAATGTGCCTATGTaGGACTTGATCTGCATATTG +
Preference number: 5 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQFNVPM*DLICIL
Trigger: CAATATGCAGATCAAGTCCAACATAGGCACATTAAA...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGAATTTTACAGCTGACTaGATGTTCAAGGAATTCTCG +
Preference number: 5 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQNFTAD*MFKEFS
Trigger: CGAGAATTCCTTGAACATCAAGTCAGCTGTAAAATT...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TACGTGCCTCACTCAGAACTGACGGGCCGAGTTCTATCTAGGTGTGTCTTCCAGGGTTTGTTCACATTTTaGCGATGTGGAAACATCTTT +
Preference number: 5 (lower is better)
Translates to: YVPHSELTGRVLSRCVFQGLFTF*RCGNIF
Trigger: AAAGATGTTTCCACATCGCAAAAATGTGAACAAACC...CTGGAAGACACACCTAGATAGAACTCGGCCCGTCAGTTCTGAGTGAGGCACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGTTCCACCGACTGGTTaGTTCACATTTTTGCGATGT +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGVPPTG*FTFLRC
Trigger: ACATCGCAAAAATGTGAACAAACCAGTCGGTGGAAC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTAAGACAGCGGATCATTaGAGGTCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: RATVITVHTHLSCPVSLTKTADH*RSGVRD
Trigger: GTCTCGAACTCCTGACCTCAAATGATCCGCTGTCTT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATCTTCCTTGAGCGTCTaGATCTCCCCCGCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILSSLSV*ISPACL
Trigger: CAAGCAGGCGGGGGAGATCAAGACGCTCAAGGAAGA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGACTTGATCTGCATATaGGACTTCTGGATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGDLICI*DFWISD
Trigger: GTCAGAAATCCAGAAGTCCAATATGCAGATCAAGTC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATGGAGGGGTGGAGTCTaGCTATATTGCCCACGCTGG +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILWRGGV*LYCPRW
Trigger: CCAGCGTGGGCAATATAGCAAGACTCCACCCCTCCA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGGGGCCAATATATTATaGCCTGTCATGTGGCACATC +
Preference number: 5 (lower is better)
Translates to: RATVITVHTHLSCPVSLTGANIL*PVMWHI
Trigger: GATGTGCCACATGACAGGCAATAATATATTGGCCCC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGCTGGGGCATTCACTTaGGGTTCACTGATACTGTTT +
Preference number: 5 (lower is better)
Translates to: RATVITVHTHLSCPVSLTAGAFT*GSLILF
Trigger: AAACAGTATCAGTGAACCCAAAGTGAATGCCCCAGC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361156.7
ENST00000361396.6
CDS GCA 90 bp ATATCTGCATTAATCCCCAAGGTTTCCAGTTTCTCCATCAAGTTCTaGTCCACCATTGTTCTTAGTCCCTTAGTGAGGGAGGAGTTACTC +
Preference number: 5 (lower is better)
Translates to: ISALIPKVSSFSIKF*STIVLSPLVREELL
Trigger: GAGTAACTCCTCCCTCACTAAGGGACTAAGAACAATGGTGGAGCAGAACTTGATGGAGAAACTGGAAACCTTGGGGATTAATGCAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp CTTCAATACGACGATCTCACTCCGGAGCTTCTCAATCTGTGCATTTTTCTGATATTCTCGTCTTCCAGCTaGCAGAAGGTGATGTTCATG +
Preference number: 5 (lower is better)
Translates to: LQYDDLTPELLNLCIFLIFSSSS*QKVMFM
Trigger: CATGAACATCACCTTCTGCAAGCTGGAAGACGAGAA...TATCAGAAAAATGCACAGATTGAGAAGCTCCGGAGTGAGATCGTCGTATTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTCTTCCTTGAGCGTCTaGATCTCCCCCGCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNSSLSV*ISPACL
Trigger: CAAGCAGGCGGGGGAGATCAAGACGCTCAAGGAAGA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACGTTTGCACTCTTCCTaGAGCGTCTTGATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILRLHSS*SVLISP
Trigger: GGGGGAGATCAAGACGCTCAAGGAAGAGTGCAAACG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTTCTTGATGAATAGCTaGAACTCGAGCTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGFLMNS*NSSCPF
Trigger: AAATGGACAGCTCGAGTTCAAGCTATTCATCAAGAA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGCTCTTTCTTGTGTTCTaGATGAATAGCTTGAACTCG +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGLFLVF*MNSLNS
Trigger: CGAGTTCAAGCTATTCATCAAGAACACAAGAAAGAG...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTCTGAAAGTTCTTCTATaGGTTCCAGTATGTGCGACG +
Preference number: 5 (lower is better)
Translates to: RATVITVHTHLSCPVSLTLKVLL*VPVCAT
Trigger: CGTCGCACATACTGGAACCAATAGAAGAACTTTCAG...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp CGATCTCACTCCGGAGCTTCTCAATCTGTGCATTTTTCTGATACTATGCAGATGCTGAAAGTTCTTCTATaGGTTCCAGTATGTGCGACG +
Preference number: 5 (lower is better)
Translates to: RSHSGASQSVHFSDTMQMLKVLL*VPVCAT
Trigger: CGTCGCACATACTGGAACCAATAGAAGAACTTTCAG...CATCTGCATAGTATCAGAAAAATGCACAGATTGAGAAGCTCCGGAGTGAGATCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGAAGCTGCCCTTGTTTaGTGGTGGCGGCACAGGAAG +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNEAALV*WWRHRK
Trigger: CTTCCTGTGCCGCCACCACAAAACAAGGGCAGCTTC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTGGAGGGGTGGAGTCTaGCTATATTGCCCACGCTGG +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNWRGGV*LYCPRW
Trigger: CCAGCGTGGGCAATATAGCAAGACTCCACCCCTCCA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAGGCAGGAAAATCGCTaGAATCTGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILRQENR*NLGGGG
Trigger: ACCTCCGCCTCCCAGATTCAAGCGATTTTCCTGCCT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGAGATATTGGTCATGGTaGACTGAGGAGCCAATTAAA +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGRYWSW*TEEPIK
Trigger: TTTAATTGGCTCCTCAGTCAACCATGACCAATATCT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGCCACACCATTCTCTTaGATGTATGCAGAGAGTTAC +
Preference number: 5 (lower is better)
Translates to: RATVITVHTHLSCPVSLTATPFS*MYAESY
Trigger: GTAACTCTCTGCATACATCAAAGAGAATGGTGTGGC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCGTTTGCACTCTTCCTaGAGCGTCTTGATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNRLHSS*SVLISP
Trigger: GGGGGAGATCAAGACGCTCAAGGAAGAGTGCAAACG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAATCTTCTTCCGGCGTTaGCACTCTTCCTTGAGCGTC +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILIFFRR*HSSLSV
Trigger: GACGCTCAAGGAAGAGTGCAAACGCCGGAAGAAGAT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GCTTTCCTGACTATCAAGAAGCTGCATGACATTATGGAAATCCTGGGGATATGGTGCATTTCATATTCCTaGGAGAATCTGACTGCACTG +
Preference number: 5 (lower is better)
Translates to: AFLTIKKLHDIMEILGIWCISYS*ENLTAL
Trigger: CAGTGCAGTCAGATTCTCCAAGGAATATGAAATGCA...CCATATCCCCAGGATTTCCATAATGTCATGCAGCTTCTTGATAGTCAGGAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CAA 90 bp TCTATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTCTGACTTGATCTGCATATaGGACTTCTGGATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: SIIEVRSFSICDRSRPFSDLICI*DFWISD
Trigger: GTCAGAAATCCAGAAGTCCAATATGCAGATCAAGTC...AGAGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGTTTAATGTGCCTATGTaGGACTTGATCTGCATATTG +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGFNVPM*DLICIL
Trigger: CAATATGCAGATCAAGTCCAACATAGGCACATTAAA...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGAATTTTACAGCTGACTaGATGTTCAAGGAATTCTCG +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGNFTAD*MFKEFS
Trigger: CGAGAATTCCTTGAACATCAAGTCAGCTGTAAAATT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGTTTTTGGAAGGAAGTaGTATCATTTTGGGTACTTC +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGVFGRK*YHFGYF
Trigger: GAAGTACCCAAAATGATACAACTTCCTTCCAAAAAC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGGGTTTGTTCACATTTTaGCGATGTGGAAACATCTTT +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGGLFTF*RCGNIF
Trigger: AAAGATGTTTCCACATCGCAAAAATGTGAACAAACC...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp GGAAGGATTCTTTTAGAGGGCAGGAATGGGCTACAAGTAAAAAGGATCCCAGGGATTTTCAATACTGTATaGGGTGCCATTAAAGAGACC +
Preference number: 5 (lower is better)
Translates to: GRILLEGRNGLQVKRIPGIFNTV*GAIKET
Trigger: GGTCTCTTTAATGGCACCCAATACAGTATTGAAAAT...CCCTGGGATCCTTTTTACTTGTAGCCCATTCCTGCCCTCTAAAAGAATCCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCCGGGGAATTCCTGCTaGGACCAGACATCAGGAATT +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNPGNSC*DQTSGI
Trigger: AATTCCTGATGTCTGGTCCAAGCAGGAATTCCCCGG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTCTGGAAGGGCATGCTaGAAAACCAATCCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNSGRAC*KTNPLP
Trigger: AGGCAGCGGATTGGTTTTCAAGCATGCCCTTCCAGA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATATCTTCTTCCGGCGTTaGCACTCTTCCTTGAGCGTC +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNIFFRR*HSSLSV
Trigger: GACGCTCAAGGAAGAGTGCAAACGCCGGAAGAAGAT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGTCCATTTGCTTTCCTGACTATCAAGAAGCTGCATGACATTATGGAAATCCTGTGGTTCATAAAGGCCTaGTCACAAAAATGGCACTGG +
Preference number: 5 (lower is better)
Translates to: CPFAFLTIKKLHDIMEILWFIKA*SQKWHW
Trigger: CCAGTGCCATTTTTGTGACAAGGCCTTTATGAACCA...CAGGATTTCCATAATGTCATGCAGCTTCTTGATAGTCAGGAAAGCAAATGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CAA 90 bp CATCTATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTTTCTTGATGAATAGCTaGAACTCGAGCTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: HLSLRFEVSLYVTGADPSFLMNS*NSSCPF
Trigger: AAATGGACAGCTCGAGTTCAAGCTATTCATCAAGAA...AGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGATAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CAA 90 bp TCTATCATTGAGGTTCGAAGTTTCTCTATATGTGACAGGAGCCGACCCTTCTCTCTCTTTCTTGTGTTCTaGATGAATAGCTTGAACTCG +
Preference number: 5 (lower is better)
Translates to: SIIEVRSFSICDRSRPFSLFLVF*MNSLNS
Trigger: CGAGTTCAAGCTATTCATCAAGAACACAAGAAAGAG...AGAGAAGGGTCGGCTCCTGTCACATATAGAGAAACTTCGAACCTCAATGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGCTAAAGGATTTCCTTaGGGTTCACTGATACTGTTT +
Preference number: 5 (lower is better)
Translates to: RATVITVHTHLSCPVSLTAKGFP*GSLILF
Trigger: AAACAGTATCAGTGAACCCAAAGGAAATCCTTTAGC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347108.7
ENST00000376829.7
CDS-3UTR CAA 90 bp CTGAAAGTTCTTCTATTGGTTCCAGTATGTGCGACGAGAATGCCTGTTCATGCAGCTAAAGGATTTCCTTaGGGTTCACTGATACTGTTT +
Preference number: 5 (lower is better)
Translates to: LKVLLLVPVCATRMPVHAAKGFP*GSLILF
Trigger: AAACAGTATCAGTGAACCCAAAGGAAATCCTTTAGC...TGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAATAGAAGAACTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTTGCCCACGCTGGTCTaGAACTCCTGTGCTCAAGTT +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNLPTLV*NSCAQV
Trigger: AACTTGAGCACAGGAGTTCAAGACCAGCGTGGGCAA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTAGATATTGGTCATGGTaGACTGAGGAGCCAATTAAA +
Preference number: 5 (lower is better)
Translates to: RATVITVHTHLSCPVSLTRYWSW*TEEPIK
Trigger: TTTAATTGGCTCCTCAGTCAACCATGACCAATATCT...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATTCTCGTCTTCCAGCTaGCAGAAGGTGATGTTCATG +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILFSSSS*QKVMFM
Trigger: CATGAACATCACCTTCTGCAAGCTGGAAGACGAGAA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTTTTAATGTGCCTATGTaGGACTTGATCTGCATATTG +
Preference number: 5 (lower is better)
Translates to: RATVITVHTHLSCPVSLTFNVPM*DLICIL
Trigger: CAATATGCAGATCAAGTCCAACATAGGCACATTAAA...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp AGGGCAACAGTTATCACAGTTCATACACACCTTTCATGTCCTGTCTCACTCACTGTTTTTGGAAGGAAGTaGTATCATTTTGGGTACTTC +
Preference number: 5 (lower is better)
Translates to: RATVITVHTHLSCPVSLTVFGRK*YHFGYF
Trigger: GAAGTACCCAAAATGATACAACTTCCTTCCAAAAAC...AGTGAGTGAGACAGGACATGAAAGGTGTGTATGAACTGTGATAACTGTTGCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGCTGGGGCATTCACTTaGGGTTCACTGATACTGTTT +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILAGAFT*GSLILF
Trigger: AAACAGTATCAGTGAACCCAAAGTGAATGCCCCAGC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361156.7
ENST00000361396.6
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTTCTCGTCTTCCAGCTaGCAGAAGGTGATGTTCATG +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNFSSSS*QKVMFM
Trigger: CATGAACATCACCTTCTGCAAGCTGGAAGACGAGAA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATGGTTCATAAAGGCCTaGTCACAAAAATGGCACTGG +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILWFIKA*SQKWHW
Trigger: CCAGTGCCATTTTTGTGACAAGGCCTTTATGAACCA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACTGAAAGTTCTTCTATaGGTTCCAGTATGTGCGACG +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILLKVLL*VPVCAT
Trigger: CGTCGCACATACTGGAACCAATAGAAGAACTTTCAG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGTTCCACCGACTGGTTaGTTCACATTTTTGCGATGT +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILVPPTG*FTFLRC
Trigger: ACATCGCAAAAATGTGAACAAACCAGTCGGTGGAAC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGGGGCCAATATATTATaGCCTGTCATGTGGCACATC +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNGANIL*PVMWHI
Trigger: GATGTGCCACATGACAGGCAATAATATATTGGCCCC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATGCATTTCATATTCCTaGGAGAATCTGACTGCACTG +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILCISYS*ENLTAL
Trigger: CAGTGCAGTCAGATTCTCCAAGGAATATGAAATGCA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGACTTGATCTGCATATaGGACTTCTGGATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILDLICI*DFWISD
Trigger: GTCAGAAATCCAGAAGTCCAATATGCAGATCAAGTC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCTGAAAGTTCTTCTATaGGTTCCAGTATGTGCGACG +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNLKVLL*VPVCAT
Trigger: CGTCGCACATACTGGAACCAATAGAAGAACTTTCAG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTGGGTACTTCTCCAGTaGAAAGGGTATCCATTTGAG +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNWVLLQ*KGYPFE
Trigger: CTCAAATGGATACCCTTTCAACTGGAGAAGTACCCA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGTTCCACCGACTGGTTaGTTCACATTTTTGCGATGT +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNVPPTG*FTFLRC
Trigger: ACATCGCAAAAATGTGAACAAACCAGTCGGTGGAAC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGGATGTACATGTGTCTGTGAGTGTAGACATGAAAGGTATGGAAACCAAAGTATTTAATGTGCCTATGTaGGACTTGATCTGCATATTG +
Preference number: 5 (lower is better)
Translates to: MDVHVSVSVDMKGMETKVFNVPM*DLICIL
Trigger: CAATATGCAGATCAAGTCCAACATAGGCACATTAAA...TACTTTGGTTTCCATACCTTTCATGTCTACACTCACAGACACATGTACATCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATTCTTGATGAATAGCTaGAACTCGAGCTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILFLMNS*NSSCPF
Trigger: AAATGGACAGCTCGAGTTCAAGCTATTCATCAAGAA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTACTCTTTCTTGTGTTCTaGATGAATAGCTTGAACTCG +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILLFLVF*MNSLNS
Trigger: CGAGTTCAAGCTATTCATCAAGAACACAAGAAAGAG...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGCTAAAGGATTTCCTTaGGGTTCACTGATACTGTTT +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILAKGFP*GSLILF
Trigger: AAACAGTATCAGTGAACCCAAAGGAAATCCTTTAGC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347108.7
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATATGCAACTGATCACTaGAAATGCCACGTATATCTG +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILYATDH*KCHVYL
Trigger: CAGATATACGTGGCATTTCAAGTGATCAGTTGCATA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTATTTAATGTGCCTATGTaGGACTTGATCTGCATATTG +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILFNVPM*DLICIL
Trigger: CAATATGCAGATCAAGTCCAACATAGGCACATTAAA...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTTCTTGATGAATAGCTaGAACTCGAGCTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNFLMNS*NSSCPF
Trigger: AAATGGACAGCTCGAGTTCAAGCTATTCATCAAGAA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCTCTTTCTTGTGTTCTaGATGAATAGCTTGAACTCG +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNLFLVF*MNSLNS
Trigger: CGAGTTCAAGCTATTCATCAAGAACACAAGAAAGAG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATTATGCAACTGATCACTaGAAATGCCACGTATATCTG +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNYATDH*KCHVYL
Trigger: CAGATATACGTGGCATTTCAAGTGATCAGTTGCATA...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAAATTTTACAGCTGACTaGATGTTCAAGGAATTCTCG +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILNFTAD*MFKEFS
Trigger: CGAGAATTCCTTGAACATCAAGTCAGCTGTAAAATT...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp TGCCTAGTGTTCCATTATTGGAACACTAAGCATGTGGGAGTTATTTATATCCTAGTTTTTGGAAGGAAGTaGTATCATTTTGGGTACTTC +
Preference number: 5 (lower is better)
Translates to: CLVFHYWNTKHVGVIYILVFGRK*YHFGYF
Trigger: GAAGTACCCAAAATGATACAACTTCCTTCCAAAAAC...TAGGATATAAATAACTCCCACATGCTTAGTGTTCCAATAATGGAACACTAGGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATGGTTTGTTCACATTTTaGCGATGTGGAAACATCTTT +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNGLFTF*RCGNIF
Trigger: AAAGATGTTTCCACATCGCAAAAATGTGAACAAACC...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATATTTTCAATACTGTATaGGGTGCCATTAAAGAGACC +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNIFNTV*GAIKET
Trigger: GGTCTCTTTAATGGCACCCAATACAGTATTGAAAAT...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS-3UTR CAA 90 bp ATGTTATTTTTAAGCAGCAGCGGAAGTCTTAAACACCTTTACATGCTTCGAAATCCTAGGAGATACATATaGTTTTCATCCTGCATTTAC +
Preference number: 5 (lower is better)
Translates to: MLFLSSSGSLKHLYMLRNPRRYI*FSSCIY
Trigger: GTAAATGCAGGATGAAAACAATATGTATCTCCTAGG...ATTTCGAAGCATGTAAAGGTGTTTAAGACTTCCGCTGCTGCTTAAAAATAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS CCA 72 bp CGGCGGCCACAGCGACGTCGGGCCCCTCTGGGCCGCTaGCGAGCGGGTAGTAGACATGCTTCTGGAAGGGCA +
Preference number: 6 (lower is better)
Translates to: RRPQRRRAPLGR*RAGSRHASGRA
Trigger: TGCCCTTCCAGAAGCATGTCTACTACCCGCTCGCCAGCGGCCCAGAGGGGCCCGACGTCGCTGTGGCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS CCA 72 bp GCACGTCCACAGCCCCCGCCACCTTGTCCACGTCGATaGCGCTCAGCCGCCGCCAGTCCACACTCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: ARPQPPPPCPRR*RSAAASPHSPA
Trigger: GGCTGGAGAGTGTGGACTGGCGGCGGCTGAGCGCCATCGACGTGGACAAGGTGGCGGGGGCTGTGGACGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CCA 72 bp CGGCGGCCACAGCGACGTCGGGCCCCTCTGGGCCGCTaGCGAGCGGGTAGTAGACATGCTTCTGGAAGGGCT +
Preference number: 6 (lower is better)
Translates to: RRPQRRRAPLGR*RAGSRHASGRA
Trigger: AGCCCTTCCAGAAGCATGTCTACTACCCGCTCGCCAGCGGCCCAGAGGGGCCCGACGTCGCTGTGGCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466569.1
CDS CAA 72 bp TCCTGCAGCGTCAGCACGTCCACAGCCCCCGCCACCTaGTCCACGTCGATGGCGCTCAGCCGCCGCCAGTCC +
Preference number: 6 (lower is better)
Translates to: SCSVSTSTAPAT*STSMALSRRQS
Trigger: GGACTGGCGGCGGCTGAGCGCCATCGACGTGGACAAGGTGGCGGGGGCTGTGGACGTGCTGACGCTGCAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS GCA 72 bp AGCGCCCAGGTCCGGACCTGGAGCAAAGGGCGCGTCTaGCCGCGCAGGGTCAGCGTGCACCCAGAACCCTTA +
Preference number: 6 (lower is better)
Translates to: SAQVRTWSKGRV*PRRVSVHPEPL
Trigger: TAAGGGTTCTGGGTGCACGCTGACCCTGCGCGGGCAGACGCGCCCTTTGCTCCAGGTCCGGACCTGGGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS CCA 72 bp CCAGGACGTTGCTATAGCAGCGCCCAGGTCCGGACCTaGAGCAAAGGGCGCGTCTGCCCGCGCAGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: PGRCYSSAQVRT*SKGRVCPRRVS
Trigger: GCTGACCCTGCGCGGGCAGACGCGCCCTTTGCTCCAGGTCCGGACCTGGGCGCTGCTATAGCAACGTCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS GCA 72 bp GGCGGCGGCGGCCTAAGGTCTGGGCGTCCAGGACGTTaGTATAGCAGCGCCCAGGTCCGGACCTGGAGCAAA +
Preference number: 6 (lower is better)
Translates to: GGGGLRSGRPGR*YSSAQVRTWSK
Trigger: TTTGCTCCAGGTCCGGACCTGGGCGCTGCTATAGCAACGTCCTGGACGCCCAGACCTTAGGCCGCCGCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS GCA 72 bp ATCTCCCCCGCCTGCTTGGTGAGCAGCTTCTTGCTCTaGTCGCCGTCGCAGTGGCTCAGGCGCAGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: ISPACLVSSFLL*SPSQWLRRSRS
Trigger: GGAGCGGCTGCGCCTGAGCCACTGCGACGGCGAGCAGAGCAAGAAGCTGCTCACCAAGCAGGCGGGGGAGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CCA 72 bp GTCTGGTCTGGGCAAGTTGTGGCGAGGCGGGTCGACTaGCGCCGCTCTAGGGCCTTCCAGACTCCGGACCAC +
Preference number: 6 (lower is better)
Translates to: VWSGQVVARRVD*RRSRAFQTPDH
Trigger: GTGGTCCGGAGTCTGGAAGGCCCTAGAGCGGCGCCAGTCGACCCGCCTCGCCACAACTTGCCCAGACCAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS GCA 72 bp GGAGCAAAGGGCGCGTCTGCCCGCGCAGGGTCAGCGTaGACCCAGAACCCTTACAAACTTGGGTCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: GAKGASARAGSA*TQNPYKLGSGL
Trigger: CAGCCCCGACCCAAGTTTGTAAGGGTTCTGGGTGCACGCTGACCCTGCGCGGGCAGACGCGCCCTTTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS CCA 72 bp TTGGTGAGCAGCTTCTTGCTCTGCTCGCCGTCGCAGTaGCTCAGGCGCAGCCGCTCCTCCAGGGTGTGCAGC +
Preference number: 6 (lower is better)
Translates to: LVSSFLLCSPSQ*LRRSRSSRVCS
Trigger: GCTGCACACCCTGGAGGAGCGGCTGCGCCTGAGCCACTGCGACGGCGAGCAGAGCAAGAAGCTGCTCACCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CAA 90 bp ATGATGTTCTCCTGCAGCGTCAGCACGTCCACAGCCCCCGCCACCTaGTCCACGTCGATGGCGCTCAGCCGCCGCCAGTCCACACTCTCC +
Preference number: 6 (lower is better)
Translates to: MMFSCSVSTSTAPAT*STSMALSRRQSTLS
Trigger: GGAGAGTGTGGACTGGCGGCGGCTGAGCGCCATCGACGTGGACAAGGTGGCGGGGGCTGTGGACGTGCTGACGCTGCAGGAGAACATCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CAA 90 bp TCCTTGAGCGTCTTGATCTCCCCCGCCTGCTTGGTGAGCAGCTTCTaGCTCTGCTCGCCGTCGCAGTGGCTCAGGCGCAGCCGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SLSVLISPACLVSSF*LCSPSQWLRRSRSS
Trigger: GGAGGAGCGGCTGCGCCTGAGCCACTGCGACGGCGAGCAGAGCAAGAAGCTGCTCACCAAGCAGGCGGGGGAGATCAAGACGCTCAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS GCA 72 bp TCGCAGTGGCTCAGGCGCAGCCGCTCCTCCAGGGTGTaGAGCTGCGAGGTGAGGAACTCTTGTGAGTGCAGC +
Preference number: 6 (lower is better)
Translates to: SQWLRRSRSSRV*SCEVRNSCECS
Trigger: GCTGCACTCACAAGAGTTCCTCACCTCGCAGCTGCACACCCTGGAGGAGCGGCTGCGCCTGAGCCACTGCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CCA 72 bp CCTTCTTGCAGGGCGCAGGATGAAACGTGTCTGGTCTaGGCAAGTTGTGGCGAGGCGGGTCGACTGGCGCCG +
Preference number: 6 (lower is better)
Translates to: PSCRAQDETCLV*ASCGEAGRLAP
Trigger: CGGCGCCAGTCGACCCGCCTCGCCACAACTTGCCCAGACCAGACACGTTTCATCCTGCGCCCTGCAAGAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS CCA 72 bp CGGATGAGCTTCAGCAGCACCGGGTCCACCCCCGACTaGCAGTGTGGGCACTTCTCGTCTTCCAGCTTGCAG +
Preference number: 6 (lower is better)
Translates to: RMSFSSTGSTPD*QCGHFSSSSLQ
Trigger: CTGCAAGCTGGAAGACGAGAAGTGCCCACACTGCCAGTCGGGGGTGGACCCGGTGCTGCTGAAGCTCATCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CCA 72 bp CGGCTCCTTCTTGCAGGGCGCAGGATGAAACGTGTCTaGTCTGGGCAAGTTGTGGCGAGGCGGGTCGACTGG +
Preference number: 6 (lower is better)
Translates to: RLLLAGRRMKRV*SGQVVARRVDW
Trigger: CCAGTCGACCCGCCTCGCCACAACTTGCCCAGACCAGACACGTTTCATCCTGCGCCCTGCAAGAAGGAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS TCA 72 bp GGCGCAGCCGCTCCTCCAGGGTGTGCAGCTGCGAGGTaGGGAACTCTTGTGAGTGCAGCAAGTACTCGATGG +
Preference number: 6 (lower is better)
Translates to: GAAAPPGCAAAR*GTLVSAASTRW
Trigger: CCATCGAGTACTTGCTGCACTCACAAGAGTTCCTCACCTCGCAGCTGCACACCCTGGAGGAGCGGCTGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS GCA 72 bp AGCAGCAAAGCGGAGAGAGGCAGGCCGGCTCCTTCTTaGAGGGCGCAGGATGAAACGTGTCTGGTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: SSKAERGRPAPS*RAQDETCLVWA
Trigger: TGCCCAGACCAGACACGTTTCATCCTGCGCCCTGCAAGAAGGAGCCGGCCTGCCTCTCTCCGCTTTGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS CAA 90 bp GTCCGCGTCACTTTTCACTGTGTTCTTCCCGAAGCTGCCCTTGTTTaGTGGTGGCGGCACAGGAAGTGGGCCTGGGGATGCGTATGCCCG +
Preference number: 6 (lower is better)
Translates to: VRVTFHCVLPEAALV*WWRHRKWAWGCVCP
Trigger: CGGGCATACGCATCCCCAGGCCCACTTCCTGTGCCGCCACCACAAAACAAGGGCAGCTTCGGGAAGAACACAGTGAAAAGTGACGCGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000485031.5
CDS CAA 90 bp TCCACTGGGCTGCAGGATCAGCGGGAACAAGAGCTGTGGTCTCTCTaGCTCAAGTATACGTCCCTAGAACCCCAGCTGCGCGCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: STGLQDQREQELWSL*LKYTSLEPQLRAPG
Trigger: CCCAGGAGCGCGCAGCTGGGGTTCTAGGGACGTATACTTGAGCAAGAGAGACCACAGCTCTTGTTCCCGCTGATCCTGCAGCCCAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS CAA 90 bp GGGTCCACCCCCGACTGGCAGTGTGGGCACTTCTCGTCTTCCAGCTaGCAGAAGGTGATGTTCATGATGTTCTCCTGCAGCGTCAGCACG +
Preference number: 6 (lower is better)
Translates to: GSTPDWQCGHFSSSS*QKVMFMMFSCSVST
Trigger: CGTGCTGACGCTGCAGGAGAACATCATGAACATCACCTTCTGCAAGCTGGAAGACGAGAAGTGCCCACACTGCCAGTCGGGGGTGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CAA 90 bp GCCTCGATCATCAGCTGCTGGGTGGAGATCATCTTCTTCCGGCGTTaGCACTCTTCCTTGAGCGTCTTGATCTCCCCCGCCTGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: ASIISCWVEIIFFRR*HSSLSVLISPACLV
Trigger: CACCAAGCAGGCGGGGGAGATCAAGACGCTCAAGGAAGAGTGCAAACGCCGGAAGAAGATGATCTCCACCCAGCAGCTGATGATCGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS TCA 72 bp CTCCAGGGTGTGCAGCTGCGAGGTGAGGAACTCTTGTaGGTGCAGCAAGTACTCGATGGTGAACTGCGCCAG +
Preference number: 6 (lower is better)
Translates to: LQGVQLRGEELL*VQQVLDGELRQ
Trigger: CTGGCGCAGTTCACCATCGAGTACTTGCTGCACTCACAAGAGTTCCTCACCTCGCAGCTGCACACCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS GCA 72 bp AAGGGCATGCTTGAAAACCAATCCGCTGCCTCAGCTTaGATAGGAGGAGCCGGGCGGTCTTTACCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: KGMLENQSAASA*IGGAGRSLPSL
Trigger: CAGGCTGGGTAAAGACCGCCCGGCTCCTCCTATGCAAGCTGAGGCAGCGGATTGGTTTTCAAGCATGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
CDS GCA 72 bp TCCAGCTTGCAGAAGGTGATGTTCATGATGTTCTCCTaGAGCGTCAGCACGTCCACAGCCCCCGCCACCTTG +
Preference number: 6 (lower is better)
Translates to: SSLQKVMFMMFS*SVSTSTAPATL
Trigger: CAAGGTGGCGGGGGCTGTGGACGTGCTGACGCTGCAGGAGAACATCATGAACATCACCTTCTGCAAGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS GCA 72 bp AGGGTGTGCAGCTGCGAGGTGAGGAACTCTTGTGAGTaGAGCAAGTACTCGATGGTGAACTGCGCCAGACGG +
Preference number: 6 (lower is better)
Translates to: RVCSCEVRNSCE*SKYSMVNCARR
Trigger: CCGTCTGGCGCAGTTCACCATCGAGTACTTGCTGCACTCACAAGAGTTCCTCACCTCGCAGCTGCACACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS GCA 72 bp CGTCCGCGTCACTTTTCACTGTGTTCTTCCCGAAGCTaGCCTTGTTTTGTGGTGGCGGCACAGGAAGTGGGC +
Preference number: 6 (lower is better)
Translates to: RPRHFSLCSSRS*PCFVVAAQEVG
Trigger: GCCCACTTCCTGTGCCGCCACCACAAAACAAGGGCAGCTTCGGGAAGAACACAGTGAAAAGTGACGCGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000479518.1
ENST00000485031.5
CDS CAA 72 bp CCTTTCTCAGGTAATTCTCAGTGGGCACAAGTGCCTTaGGGGCTATGGCCAAGATGGCGGCGAGGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: PFSGNSQWAQVP*GLWPRWRRGQR
Trigger: CCTCTGGCCTCGCCGCCATCTTGGCCATAGCCCCAAAGGCACTTGTGCCCACTGAGAATTACCTGAGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485031.5
CDS CAA 90 bp GTGGAGATCATCTTCTTCCGGCGTTTGCACTCTTCCTTGAGCGTCTaGATCTCCCCCGCCTGCTTGGTGAGCAGCTTCTTGCTCTGCTCG +
Preference number: 6 (lower is better)
Translates to: VEIIFFRRLHSSLSV*ISPACLVSSFLLCS
Trigger: CGAGCAGAGCAAGAAGCTGCTCACCAAGCAGGCGGGGGAGATCAAGACGCTCAAGGAAGAGTGCAAACGCCGGAAGAAGATGATCTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CAA 90 bp AGCTGCTGGGTGGAGATCATCTTCTTCCGGCGTTTGCACTCTTCCTaGAGCGTCTTGATCTCCCCCGCCTGCTTGGTGAGCAGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: SCWVEIIFFRRLHSS*SVLISPACLVSSFL
Trigger: CAAGAAGCTGCTCACCAAGCAGGCGGGGGAGATCAAGACGCTCAAGGAAGAGTGCAAACGCCGGAAGAAGATGATCTCCACCCAGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CAA 90 bp GTGGTGGCACCTTTCTCAGGTAATTCTCAGTGGGCACAAGTGCCTTaGGGGCTATGGCCAAGATGGCGGCGAGGCCAGAGGTTATACCCA +
Preference number: 6 (lower is better)
Translates to: VVAPFSGNSQWAQVP*GLWPRWRRGQRLYP
Trigger: TGGGTATAACCTCTGGCCTCGCCGCCATCTTGGCCATAGCCCCAAAGGCACTTGTGCCCACTGAGAATTACCTGAGAAAGGTGCCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485031.5
CDS CCA 72 bp TTTCACTGTGTTCTTCCCGAAGCTGCCCTTGTTTTGTaGTGGCGGCACAGGAAGTGGGCCTGGGGATGCGTA +
Preference number: 6 (lower is better)
Translates to: FHCVLPEAALVL*WRHRKWAWGCV
Trigger: TACGCATCCCCAGGCCCACTTCCTGTGCCGCCACCACAAAACAAGGGCAGCTTCGGGAAGAACACAGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000479518.1
ENST00000485031.5
CDS CCA 72 bp GGTAATTCTCAGTGGGCACAAGTGCCTTTGGGGCTATaGCCAAGATGGCGGCGAGGCCAGAGGTTATACCCA +
Preference number: 6 (lower is better)
Translates to: GNSQWAQVPLGL*PRWRRGQRLYP
Trigger: TGGGTATAACCTCTGGCCTCGCCGCCATCTTGGCCATAGCCCCAAAGGCACTTGTGCCCACTGAGAATTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485031.5
CDS CCA 72 bp CTTTCTCAGGTAATTCTCAGTGGGCACAAGTGCCTTTaGGGCTATGGCCAAGATGGCGGCGAGGCCAGAGGT +
Preference number: 6 (lower is better)
Translates to: LSQVILSGHKCL*GYGQDGGEARG
Trigger: ACCTCTGGCCTCGCCGCCATCTTGGCCATAGCCCCAAAGGCACTTGTGCCCACTGAGAATTACCTGAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485031.5
CDS CAA 72 bp ATCAGCTGCTGGGTGGAGATCATCTTCTTCCGGCGTTaGCACTCTTCCTTGAGCGTCTTGATCTCCCCCGCC +
Preference number: 6 (lower is better)
Translates to: ISCWVEIIFFRR*HSSLSVLISPA
Trigger: GGCGGGGGAGATCAAGACGCTCAAGGAAGAGTGCAAACGCCGGAAGAAGATGATCTCCACCCAGCAGCTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CAA 72 bp ACTTTTCACTGTGTTCTTCCCGAAGCTGCCCTTGTTTaGTGGTGGCGGCACAGGAAGTGGGCCTGGGGATGC +
Preference number: 6 (lower is better)
Translates to: TFHCVLPEAALV*WWRHRKWAWGC
Trigger: GCATCCCCAGGCCCACTTCCTGTGCCGCCACCACAAAACAAGGGCAGCTTCGGGAAGAACACAGTGAAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000479518.1
ENST00000485031.5
CDS TCA 72 bp TGCCCGGATGAGGTCGTCGTCCTCCTGCTCCTCCTCTaGACTAAAAGGAGGGGTCCTACACAAATCAACACC +
Preference number: 6 (lower is better)
Translates to: CPDEVVVLLLLL*TKRRGPTQINT
Trigger: GGTGTTGATTTGTGTAGGACCCCTCCTTTTAGTTCAGAGGAGGAGCAGGAGGACGACGACCTCATCCGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485031.5
CDS CAA 72 bp CCCGACTGGCAGTGTGGGCACTTCTCGTCTTCCAGCTaGCAGAAGGTGATGTTCATGATGTTCTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: PDWQCGHFSSSS*QKVMFMMFSCS
Trigger: GCTGCAGGAGAACATCATGAACATCACCTTCTGCAAGCTGGAAGACGAGAAGTGCCCACACTGCCAGTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CAA 72 bp ATCTTCTTCCGGCGTTTGCACTCTTCCTTGAGCGTCTaGATCTCCCCCGCCTGCTTGGTGAGCAGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: IFFRRLHSSLSV*ISPACLVSSFL
Trigger: CAAGAAGCTGCTCACCAAGCAGGCGGGGGAGATCAAGACGCTCAAGGAAGAGTGCAAACGCCGGAAGAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CCA 72 bp AATAGTTGGCTTTGGCCTCGATCATCAGCTGCTGGGTaGAGATCATCTTCTTCCGGCGTTTGCACTCTTCCT +
Preference number: 6 (lower is better)
Translates to: NSWLWPRSSAAG*RSSSSGVCTLP
Trigger: AGGAAGAGTGCAAACGCCGGAAGAAGATGATCTCCACCCAGCAGCTGATGATCGAGGCCAAAGCCAACTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466027.1
ENST00000466569.1
CDS CCA 72 bp CTTAAAGTGGTGGCACCTTTCTCAGGTAATTCTCAGTaGGCACAAGTGCCTTTGGGGCTATGGCCAAGATGG +
Preference number: 6 (lower is better)
Translates to: LKVVAPFSGNSQ*AQVPLGLWPRW
Trigger: CCATCTTGGCCATAGCCCCAAAGGCACTTGTGCCCACTGAGAATTACCTGAGAAAGGTGCCACCACTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485031.5
CDS CCA 72 bp CCTTGTCACAAAAATGGCACTGGTAATAGTTGGCTTTaGCCTCGATCATCAGCTGCTGGGTGGAGATCATCT +
Preference number: 6 (lower is better)
Translates to: PCHKNGTGNSWL*PRSSAAGWRSS
Trigger: AGATGATCTCCACCCAGCAGCTGATGATCGAGGCCAAAGCCAACTATTACCAGTGCCATTTTTGTGACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000466569.1
CDS GCA 72 bp TGCACCATTGGCAGACTTGATTTAGTTTCCAAAGTGTaGAGGGCTGGGGCATTCACTTTGGGTTCACTGATA +
Preference number: 6 (lower is better)
Translates to: CTIGRLDLVSKV*RAGAFTLGSLI
Trigger: TATCAGTGAACCCAAAGTGAATGCCCCAGCCCTGCACACTTTGGAAACTAAATCAAGTCTGCCAATGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361156.7
ENST00000361396.6
CDS CAA 90 bp GAAGAAATGCAGCACTCTTGGGCCTTCTGGGTAAGACAAATCATTTaGACAATCCTGGTAATAGTTGGCTTTGGCCTCGATCATCAGCTG +
Preference number: 6 (lower is better)
Translates to: EEMQHSWAFWVRQII*TILVIVGFGLDHQL
Trigger: CAGCTGATGATCGAGGCCAAAGCCAACTATTACCAGGATTGTCAAAATGATTTGTCTTACCCAGAAGGCCCAAGAGTGCTGCATTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466027.1
CDS GCA 72 bp TTAATCCCCAAGGTTTCCAGTTTCTCCATCAAGTTCTaGTCCACCATTGTTCTTAGTCCCTTAGTGAGGGAG +
Preference number: 6 (lower is better)
Translates to: LIPKVSSFSIKF*STIVLSPLVRE
Trigger: CTCCCTCACTAAGGGACTAAGAACAATGGTGGAGCAGAACTTGATGGAGAAACTGGAAACCTTGGGGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS CCA 72 bp GGTAAGACAAATCATTTTGACAATCCTGGTAATAGTTaGCTTTGGCCTCGATCATCAGCTGCTGGGTGGAGA +
Preference number: 6 (lower is better)
Translates to: GKTNHFDNPGNS*LWPRSSAAGWR
Trigger: TCTCCACCCAGCAGCTGATGATCGAGGCCAAAGCCAACTATTACCAGGATTGTCAAAATGATTTGTCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466027.1
CDS CAA 72 bp CAGCACTCTTGGGCCTTCTGGGTAAGACAAATCATTTaGACAATCCTGGTAATAGTTGGCTTTGGCCTCGAT +
Preference number: 6 (lower is better)
Translates to: QHSWAFWVRQII*TILVIVGFGLD
Trigger: ATCGAGGCCAAAGCCAACTATTACCAGGATTGTCAAAATGATTTGTCTTACCCAGAAGGCCCAAGAGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466027.1
CDS CCA 72 bp ACAAATCATTTTGACAATCCTGGTAATAGTTGGCTTTaGCCTCGATCATCAGCTGCTGGGTGGAGATCATCT +
Preference number: 6 (lower is better)
Translates to: TNHFDNPGNSWL*PRSSAAGWRSS
Trigger: AGATGATCTCCACCCAGCAGCTGATGATCGAGGCCAAAGCCAACTATTACCAGGATTGTCAAAATGATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466027.1
CDS TCA 72 bp GGAAGGAAGTTGTATCATTTTGGGTACTTCTCCAGTTaGAAGGGTATCCATTTGAGAAACACTGCACTGATC +
Preference number: 6 (lower is better)
Translates to: GRKLYHFGYFSS*KGIHLRNTALI
Trigger: GATCAGTGCAGTGTTTCTCAAATGGATACCCTTTCAACTGGAGAAGTACCCAAAATGATACAACTTCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS CAA 90 bp GTCTGTTTTTGGAAGGAAGTTGTATCATTTTGGGTACTTCTCCAGTaGAAAGGGTATCCATTTGAGAAACACTGCACTGATCTGAAGAGA +
Preference number: 6 (lower is better)
Translates to: VCFWKEVVSFWVLLQ*KGYPFEKHCTDLKR
Trigger: TCTCTTCAGATCAGTGCAGTGTTTCTCAAATGGATACCCTTTCAACTGGAGAAGTACCCAAAATGATACAACTTCCTTCCAAAAACAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS CCA 72 bp GATAGAGTTGAAGAAATGCAGCACTCTTGGGCCTTCTaGGTAAGACAAATCATTTTGACAATCCTGGTAATA +
Preference number: 6 (lower is better)
Translates to: DRVEEMQHSWAF*VRQIILTILVI
Trigger: TATTACCAGGATTGTCAAAATGATTTGTCTTACCCAGAAGGCCCAAGAGTGCTGCATTTCTTCAACTCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466027.1
CDS CCA 72 bp TTTGATAAACATCTCAGGGACATTAGTTCCACCGACTaGTTTGTTCACATTTTTGCGATGTGGAAACATCTT +
Preference number: 6 (lower is better)
Translates to: FDKHLRDISSTD*FVHIFAMWKHL
Trigger: AAGATGTTTCCACATCGCAAAAATGTGAACAAACCAGTCGGTGGAACTAATGTCCCTGAGATGTTTATCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
ENST00000479518.1
ENST00000485031.5
CDS CCA 72 bp TTCAAACTTGATAGAGTTGAAGAAATGCAGCACTCTTaGGCCTTCTGGGTAAGACAAATCATTTTGACAATC +
Preference number: 6 (lower is better)
Translates to: FKLDRVEEMQHS*AFWVRQIILTI
Trigger: GATTGTCAAAATGATTTGTCTTACCCAGAAGGCCCAAGAGTGCTGCATTTCTTCAACTCTATCAAGTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466027.1
CDS TCA 72 bp CTGAAGAGAGTAGTGCTTTCTCCTCAATTTTACAGCTaGCTTGATGTTCAAGGAATTCTCGAATTTGATGAA +
Preference number: 6 (lower is better)
Translates to: LKRVVLSPQFYS*LDVQGILEFDE
Trigger: TTCATCAAATTCGAGAATTCCTTGAACATCAAGTCAGCTGTAAAATTGAGGAGAAAGCACTACTCTCTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7
CDS TCA 72 bp CTTTCTGATTCCACACTTTTTAGTACTCTATGCAACTaGTCACTTGAAATGCCACGTATATCTGCATTAATC +
Preference number: 6 (lower is better)
Translates to: LSDSTLFSTLCN*SLEMPRISALI
Trigger: GATTAATGCAGATATACGTGGCATTTCAAGTGATCAGTTGCATAGAGTACTAAAAAGTGTGGAATCAGAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347108.7
ENST00000361156.7
ENST00000361396.6
ENST00000376829.7