RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DZANK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000089091

Ensembl transcript IDs: ENST00000262547.9, ENST00000329494.9, ENST00000357236.8, ENST00000358866.10, ENST00000377630.9, ENST00000460891.5, ENST00000470526.1, ENST00000476058.5, ENST00000480488.2, ENST00000608192.5, ENST00000609267.5

Found 903 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCGGCAAATTACCTTCTCCTTCAAGTGGAGGCTTGCCTGTGGCTaGAGCTGTAGAGCAAGAGGGGCCTCACACACCACACAGATGGGA +
Preference number: 1 (lower is better)
Translates to: ARQITFSFKWRLACG*SCRARGASHTTQMG
Trigger: TCCCATCTGTGTGGTGTGTGAGGCCCCTCTTGCTCTACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGGAGAAGGTAATTTGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR TCA 90 bp CACTGCACATCGACTCTTGTGATGAAGGCAGGGCCCCCTCACAGGTaGCACAGTATCTCAGGTGAGCAGGATTTCCTGTACCACAGGCCC +
Preference number: 1 (lower is better)
Translates to: HCTSTLVMKAGPPHR*HSISGEQDFLYHRP
Trigger: GGGCCTGTGGTACAGGAAATCCTGCTCACCTGAGATACTGTGTCACCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR CCA 90 bp AGCCCATCTGAGCTCCTTCTGGGGGTGGGAGACGACAGCCAAATATaGGTGGGACAGGAGAGCCACATTCTTGACAGAAGCGAGCAAAGG +
Preference number: 1 (lower is better)
Translates to: SPSELLLGVGDDSQI*VGQESHILDRSEQR
Trigger: CCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCTCAGATGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR TCA 90 bp TGTGATGAAGGCAGGGCCCCCTCACAGGTGACACAGTATCTCAGGTaGGCAGGATTTCCTGTACCACAGGCCCGGCAAATTACCTTCTCC +
Preference number: 1 (lower is better)
Translates to: CDEGRAPSQVTQYLR*AGFPVPQARQITFS
Trigger: GGAGAAGGTAATTTGCCGGGCCTGTGGTACAGGAAATCCTGCTCACCTGAGATACTGTGTCACCTGTGAGGGGGCCCTGCCTTCATCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR GCA 90 bp CACCACACAGATGGGAGTGTTCATGGGTACCAAGCTTCTGCATTCTaGACACAAGCCCATCTGAGCTCCTTCTGGGGGTGGGAGACGACA +
Preference number: 1 (lower is better)
Translates to: HHTDGSVHGYQASAF*TQAHLSSFWGWETT
Trigger: TGTCGTCTCCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCATGAACACTCCCATCTGTGTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR GCA 90 bp CCTCACACACCACACAGATGGGAGTGTTCATGGGTACCAAGCTTCTaGATTCTGCACACAAGCCCATCTGAGCTCCTTCTGGGGGTGGGA +
Preference number: 1 (lower is better)
Translates to: PHTPHRWECSWVPSF*ILHTSPSELLLGVG
Trigger: TCCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCATGAACACTCCCATCTGTGTGGTGTGTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR CCA 90 bp CATCTGAGCTCCTTCTGGGGGTGGGAGACGACAGCCAAATATGGGTaGGACAGGAGAGCCACATTCTTGACAGAAGCGAGCAAAGGGATC +
Preference number: 1 (lower is better)
Translates to: HLSSFWGWETTAKYG*DRRATFLTEASKGI
Trigger: GATCCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCTCAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR CCA 90 bp GTGGCTGCAGCTGTAGAGCAAGAGGGGCCTCACACACCACACAGATaGGAGTGTTCATGGGTACCAAGCTTCTGCATTCTGCACACAAGC +
Preference number: 1 (lower is better)
Translates to: VAAAVEQEGPHTPHR*ECSWVPSFCILHTS
Trigger: GCTTGTGTGCAGAATGCAGAAGCTTGGTACCCATGAACACTCCCATCTGTGTGGTGTGTGAGGCCCCTCTTGCTCTACAGCTGCAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR CCA 90 bp CGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTaGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGAC +
Preference number: 1 (lower is better)
Translates to: RPPLLVDVCSSLHEN*NRFMVLIHNSHGYD
Trigger: GTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR CCA 90 bp GTAGAGCAAGAGGGGCCTCACACACCACACAGATGGGAGTGTTCATaGGTACCAAGCTTCTGCATTCTGCACACAAGCCCATCTGAGCTC +
Preference number: 1 (lower is better)
Translates to: VEQEGPHTPHRWECS*VPSFCILHTSPSEL
Trigger: GAGCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCATGAACACTCCCATCTGTGTGGTGTGTGAGGCCCCTCTTGCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR TCA 90 bp GACTTCACACAAATACCACAGGAGCCACAGAATCGGGCAGACAGGTaGTTGCTGGCCCCACATTTAGGGCAAACAGAACAGCCAGCAGGA +
Preference number: 1 (lower is better)
Translates to: DFTQIPQEPQNRADR*LLAPHLGQTEQPAG
Trigger: TCCTGCTGGCTGTTCTGTTTGCCCTAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATTCTGTGGCTCCTGTGGTATTTGTGTGAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR GCA 90 bp GTATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTaGACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCC +
Preference number: 1 (lower is better)
Translates to: VFLSGPHCWSMSAPL*TRTGIASWCLFITA
Trigger: GGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR TCA 90 bp CTGCAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGCATAACACCTaGGGTGAGCAGAGATGTGATCCAGCTGTCTTCTCCAGTACCCTC +
Preference number: 1 (lower is better)
Translates to: LQSRPGIQGCSEHNT*GEQRCDPAVFSSTL
Trigger: GAGGGTACTGGAGAAGACAGCTGGATCACATCTCTGCTCACCTCAGGTGTTATGCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR GCA 90 bp ATGAAGAGCTGTATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTaGTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATT +
Preference number: 1 (lower is better)
Translates to: MKSCISERPPLLVDV*SSLHENWNRFMVLI
Trigger: AATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATACAGCTCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR CCA 90 bp GTGACAAGGTCATCTCCAGTGTTCAGAGCCAGGTCGTATGCTGTCTaGCCTCCTGCATTCTTCTTTTGGATGCTTGCATTGCATCCCAGT +
Preference number: 1 (lower is better)
Translates to: VTRSSPVFRARSYAV*PPAFFFWMLALHPS
Trigger: ACTGGGATGCAATGCAAGCATCCAAAAGAAGAATGCAGGAGGCCAGACAGCATACGACCTGGCTCTGAACACTGGAGATGACCTTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR CCA 90 bp CAGTTTCAGGCAAAGTCCATGGAGGGTTCCTTCAGCCTGATCCCGTaGACACTTGTGGAGTGGAAATTTCATCTCACCCACCTTTCCCAT +
Preference number: 1 (lower is better)
Translates to: QFQAKSMEGSFSLIP*TLVEWKFHLTHLSH
Trigger: ATGGGAAAGGTGGGTGAGATGAAATTTCCACTCCACAAGTGTCCACGGGATCAGGCTGAAGGAACCCTCCATGGACTTTGCCTGAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR GCA 90 bp GTGGAGTGGAAATTTCATCTCACCCACCTTTCCCATCCTGGGTTCTaGAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGCATAACACCT +
Preference number: 1 (lower is better)
Translates to: VEWKFHLTHLSHPGF*NQGPEFRVVLSITP
Trigger: AGGTGTTATGCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGAAAGGTGGGTGAGATGAAATTTCCACTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR CCA 90 bp TGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATaGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTGTCT +
Preference number: 1 (lower is better)
Translates to: WSMSAPLCTRTGIAS*CLFITATVMTGRLS
Trigger: AGACAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR GCA 90 bp TCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTaGTTATTCATAACAGCCACGGTTATGACGGGTCGATTGTCTTCA +
Preference number: 1 (lower is better)
Translates to: SMSAPLCTRTGIASW*LFITATVMTGRLSS
Trigger: TGAAGACAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR GCA 90 bp ATGCTATGTGTACTCCTCTGTACATGTGCTTATACCACATGTATGTaGATATCTAACTCTGCACAACCCCGGGAAAGGCAAGTCGACGCT +
Preference number: 1 (lower is better)
Translates to: MLCVLLCTCAYTTCM*ISNSAQPRERQVDA
Trigger: AGCGTCGACTTGCCTTTCCCGGGGTTGTGCAGAGTTAGATATGCACATACATGTGGTATAAGCACATGTACAGAGGAGTACACATAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR GCA 90 bp ATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTTGCCCAGGCTGGAGTaGGATGGCGCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: ISERPPLLVDVCSSLHENLPRLE*DGAILA
Trigger: AGCCAAGATCGCGCCATCGCACTCCAGCCTGGGCAA...GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR CCA 90 bp CGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTAGTCACTCACCCAGCTaGACCTGCTGCCGCACAGCC +
Preference number: 2 (lower is better)
Translates to: RVDCLHHSSWGLLPHPAASHSPS*TCCRTA
Trigger: GGCTGTGCGGCAGCAGGTCCAGCTGGGTGAGTGACT...AGCTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR TCA 90 bp ACCACAGGAGCCACAGAATCGGGCAGACAGGTGATTGCTGGCCCCACATTTAGGGGTGGGCGCATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: TTGATESGRQVIAGPTFRGGRIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATGCGCCCACC...CCTAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATTCTGTGGCTCCTGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR-3UTR CCA 90 bp CTTTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGGCCCCCTCACAGGCAGGAATGCCGAGCATaGCTCCACACCAGCCGCAGA +
Preference number: 2 (lower is better)
Translates to: LYPHCTSTLVMKAGPPHRQECRA*LHTSRR
Trigger: TCTGCGGCTGGTGTGGAGCCATGCTCGGCATTCCTG...CCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR CAA 90 bp CTAACTCTGCACAACCCCGGGAAAGGCAAGTCGACGCTGATGTCATaGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGGAG +
Preference number: 2 (lower is better)
Translates to: LTLHNPGKGKSTLMS*LAEERGGGCGTEWE
Trigger: CTCCCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGTCGACTTGCCTTTCCCGGGGTTGTGCAGAGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR GCA 90 bp TCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTGGTGCTCTCTCTTCCTaGAAGGCCAAGCAGAGTTGC +
Preference number: 2 (lower is better)
Translates to: SSCLLQYPLPGLMAVRRGGALSS*KAKQSC
Trigger: GCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACC...ACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR GCA 90 bp TCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTCCAGTAAAGTGGCGGTaGTCTCTCTTCCTGCAAGGC +
Preference number: 2 (lower is better)
Translates to: SSCLLQYPLPGLMAVRRGPVKWR*SLFLQG
Trigger: GCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGG...ACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR CCA 90 bp GGCTCAGAAAAAGGGCGAGGTTCCTCAGCAGCTAGAGCCAGGCTTCTGTCCAAGGCGATGGCGCGATCTTaGCTCACTGTAACCTCTGCC +
Preference number: 2 (lower is better)
Translates to: GSEKGRGSSAARARLLSKAMARS*LTVTSA
Trigger: GGCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGC...CTTGGACAGAAGCCTGGCTCTAGCTGCTGAGGAACCTCGCCCTTTTTCTGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377630.9
3UTR-3UTR CCA 90 bp GCCACGGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCCTCTTCCTTCCCCCGTaGGTCCGACTTCCTTCAGCA +
Preference number: 2 (lower is better)
Translates to: ATVMTGRLSSSQQLGSAPLFLPP*VRLPSA
Trigger: TGCTGAAGGAAGTCGGACCCACGGGGGAAGGAAGAG...GGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACCGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR TCA 90 bp GTGAGCAGAGATGTGATCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATACCCTCTTCCTGGGCTaGTGGCTGTCAGGAGGGGTT +
Preference number: 2 (lower is better)
Translates to: VSRDVIQLSSPVPSSWADTLFLG*WLSGGV
Trigger: AACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGT...ATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGATCACATCTCTGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR-3UTR TCA 90 bp GTATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGACTTGGCAGCAAAGAGTaGGGTGACAAGGTCATCTCC +
Preference number: 2 (lower is better)
Translates to: VFLSGPHCWSMSAPLCTRLGSKE*GDKVIS
Trigger: GGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAG...TCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR GCA 90 bp TCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTAGGCGTAAGCCACTGTaGCAGCCATGCACGTATTCT +
Preference number: 2 (lower is better)
Translates to: SSCLLQYPLPGLMAVRRGRRKPL*QPCTYS
Trigger: AGAATACGTGCATGGCTGGCACAGTGGCTTACGCCT...ACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR TCA 90 bp GAGGCCAACAGTCTGTGTTCCTATGTCCCTCTTAGTCCCAACATCAGATCTGGGGGGCCCCCTCACAGGTaGCACAGTATCTCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: EANSLCSYVPLSPNIRSGGPPHR*HSISGE
Trigger: CTCACCTGAGATACTGTGTCACCTGTGAGGGGGCCC...CCCAGATCTGATGTTGGGACTAAGAGGGACATAGGAACACAGACTGTTGGCCTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR-3UTR TCA 90 bp ATGACCAGTGGTGCTCAAGTGTTCCTTTCTAGTCCAGCACTGCGGTCCCTAGATGGGCCCCCTCACAGGTaGCACAGTATCTCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: MTSGAQVFLSSPALRSLDGPPHR*HSISGE
Trigger: CTCACCTGAGATACTGTGTCACCTGTGAGGGGGCCC...ATCTAGGGACCGCAGTGCTGGACTAGAAAGGAACACTTGAGCACCACTGGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR-3UTR TCA 90 bp CTTTCCCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGCAGGCGGAGGTTGCAGTaGGCTGAGATTGCGCTACTG +
Preference number: 2 (lower is better)
Translates to: LSHPGFCNQGPEFRVVLSRRRLQ*AEIALL
Trigger: CAGTAGCGCAATCTCAGCTCACTGCAACCTCCGCCT...GCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR-3UTR TCA 90 bp GCCACGGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCGGAGAGCCACATTCTTaGCAGAAGCGAGCAAAGGGA +
Preference number: 2 (lower is better)
Translates to: ATVMTGRLSSSQQLGSAPGEPHS*QKRAKG
Trigger: TCCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCC...GGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACCGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR-3UTR GCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGAGGCGTAAGCCACTGTaGCAGCCATGCACGTATTCT +
Preference number: 2 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWRRKPL*QPCTYS
Trigger: AGAATACGTGCATGGCTGGCACAGTGGCTTACGCCT...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR GCA 90 bp AGACAGGTGATTGCTGGCCCCACATTTAGGGCAAACAGAACAGCCAGCAGGAATTTGCCCAGGCTGGAGTaGGATGGCGCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: RQVIAGPTFRANRTASRNLPRLE*DGAILA
Trigger: AGCCAAGATCGCGCCATCGCACTCCAGCCTGGGCAA...ATTCCTGCTGGCTGTTCTGTTTGCCCTAAATGTGGGGCCAGCAATCACCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR GCA 90 bp TCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTGGGCTTTATCCCCACTaGACATCGACTCTTGTGATG +
Preference number: 2 (lower is better)
Translates to: SSCLLQYPLPGLMAVRRGGLYPH*TSTLVM
Trigger: CATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCC...ACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR-3UTR GCA 90 bp GTATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAGGGCTTTATCCCCACTaGACATCGACTCTTGTGATG +
Preference number: 2 (lower is better)
Translates to: VFLSGPHCWSMSAPLCTRGLYPH*TSTLVM
Trigger: CATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCC...TCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR GCA 90 bp CTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGGGAATATTCAGGGACTaGCAGGCACATCGGGGCTCA +
Preference number: 2 (lower is better)
Translates to: LLVDVCSSLHENWNRFMVGIFRD*QAHRGS
Trigger: TGAGCCCCGATGTGCCTGGCAGTCCCTGAATATTCC...CACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377630.9
3UTR-3UTR GCA 90 bp CTTTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGGCCCCCTCACAGGTCCCATCCTGGGTTCTaGAATCAAGGCCCGGAATTC +
Preference number: 2 (lower is better)
Translates to: LYPHCTSTLVMKAGPPHRSHPGF*NQGPEF
Trigger: GAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGA...CCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR-3UTR CCA 90 bp AAGGCCAAGCAGAGTTGCTTCATGAAGAGCTGTATTTCTGAGCGGCCCCCACTGGCGATGGCGCGATCTTaGCTCACTGTAACCTCTGCC +
Preference number: 2 (lower is better)
Translates to: KAKQSCFMKSCISERPPLAMARS*LTVTSA
Trigger: GGCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGC...CAGTGGGGGCCGCTCAGAAATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR CCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGAGCTCCTTCTGGGGGTaGGAGACGACAGCCAAATAT +
Preference number: 2 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWSSFWG*ETTAKY
Trigger: ATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCT...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR-3UTR TCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGGCACGTATTCTTAAATaGAGTCCCGTGGAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWARILK*SPVEAS
Trigger: TGAGGCCTCCACGGGACTTCATTTAAGAATACGTGC...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR TCA 90 bp TCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTACACAGTATCTCAGGTaGGCAGGATTTCCTGTACCA +
Preference number: 2 (lower is better)
Translates to: SSCLLQYPLPGLMAVRRGTQYLR*AGFPVP
Trigger: TGGTACAGGAAATCCTGCTCACCTGAGATACTGTGT...ACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR-3UTR TCA 90 bp TCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTTCTGAGCATAACACCTaGGGTGAGCAGAGATGTGAT +
Preference number: 2 (lower is better)
Translates to: SSCLLQYPLPGLMAVRRGSEHNT*GEQRCD
Trigger: ATCACATCTCTGCTCACCTCAGGTGTTATGCTCAGA...ACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR-3UTR TCA 90 bp TTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGGCCCCCTCACAGGTGGCACTCCAGCCTGTGTaGCAGAACAAGATTCTGTCT +
Preference number: 2 (lower is better)
Translates to: LSPLHIDSCDEGRAPSQVALQPV*QNKILS
Trigger: AGACAGAATCTTGTTCTGTCACACAGGCTGGAGTGC...CACCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR-3UTR TCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTGCACACAAGCCCATCTaGGCTCCTTCTGGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLAHKPI*APSGGG
Trigger: CCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGTGC...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR-3UTR GCA 90 bp GGAAAGGAGCCAGGCAAGATGCAGTTTCAGGCAAAGTCCATGGAGGGTTCCTTCGGAATATTCAGGGACTaGCAGGCACATCGGGGCTCA +
Preference number: 2 (lower is better)
Translates to: GKEPGKMQFQAKSMEGSFGIFRD*QAHRGS
Trigger: TGAGCCCCGATGTGCCTGGCAGTCCCTGAATATTCC...GAAGGAACCCTCCATGGACTTTGCCTGAAACTGCATCTTGCCTGGCTCCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR-3UTR CCA 90 bp CGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTAGCCTCTCGAGTAACTaGGATTACAGGCATGCACCA +
Preference number: 2 (lower is better)
Translates to: RVDCLHHSSWGLLPHPAASLSSN*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGTTACTCGAGAGGCT...AGCTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR CCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGAGCCTCTCGAGTAACTaGGATTACAGGCATGCACCA +
Preference number: 2 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWSLSSN*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGTTACTCGAGAGGCT...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CCA 90 bp GTGAGCAGAGATGTGATCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATACCTTCTCCTTCAAGTaGAGGCTTGCCTGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: VSRDVIQLSSPVPSSWADTFSFK*RLACGC
Trigger: GCAGCCACAGGCAAGCCTCCACTTGAAGGAGAAGGT...ATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGATCACATCTCTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR CCA 90 bp GGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCACCTTCTCCTTCAAGTaGAGGCTTGCCTGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: GYDGSIVFITAVGVCSLITFSFK*RLACGC
Trigger: GCAGCCACAGGCAAGCCTCCACTTGAAGGAGAAGGT...GATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR CCA 90 bp AAGTGGCGGTGCTCTCTCTTCCTGCAAGGCCAAGCAGAGTTGCTTCATGAAGAGGACGACAGCCAAATATaGGTGGGACAGGAGAGCCAC +
Preference number: 2 (lower is better)
Translates to: KWRCSLFLQGQAELLHEEDDSQI*VGQESH
Trigger: GTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTC...CTCTTCATGAAGCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR-3UTR TCA 90 bp GCAGAGCAGGAAAGGGAAAGGAGCCAGGCAAGATGCAGTTTCAGGCAAAGTCCAAATCGGGCAGACAGGTaGTTGCTGGCCCCACATTTA +
Preference number: 2 (lower is better)
Translates to: AEQERERSQARCSFRQSPNRADR*LLAPHL
Trigger: TAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATT...TGGACTTTGCCTGAAACTGCATCTTGCCTGGCTCCTTTCCCTTTCCTGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR-3UTR TCA 90 bp ATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTCAGAAGGTGATCGCTaGAATTCACTGCCTTGTTCA +
Preference number: 2 (lower is better)
Translates to: ISERPPLLVDVCSSLHENSEGDR*NSLPCS
Trigger: TGAACAAGGCAGTGAATTTCAGCGATCACCTTCTGA...GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR GCA 90 bp GAGGCTCCTAGTTTGAGCGAGTTGGTCCTCAAGCCCTTGGCCAAACTTGGCAGCTTCAAGCGATTTTCCTaGCTCAGCCTCTCGAGTAAC +
Preference number: 2 (lower is better)
Translates to: EAPSLSELVLKPLAKLGSFKRFS*LSLSSN
Trigger: GTTACTCGAGAGGCTGAGGCAGGAAAATCGCTTGAA...GCTGCCAAGTTTGGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR GCA 90 bp GATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATTTGCCCAGGCTGGAGTaGGATGGCGCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: DVCSSLHENWNRFMVLIHLPRLE*DGAILA
Trigger: AGCCAAGATCGCGCCATCGCACTCCAGCCTGGGCAA...ATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR GCA 90 bp GTGAGCAGAGATGTGATCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATTCCCATCCTGGGTTCTaGAATCAAGGCCCGGAATTC +
Preference number: 2 (lower is better)
Translates to: VSRDVIQLSSPVPSSWADSHPGF*NQGPEF
Trigger: GAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGA...ATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGATCACATCTCTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR-3UTR CCA 90 bp ATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAAGTCACTCACCCAGCTaGACCTGCTGCCGCACAGCC +
Preference number: 2 (lower is better)
Translates to: MSAPLCTRTGIASWCLFISHSPS*TCCRTA
Trigger: GGCTGTGCGGCAGCAGGTCCAGCTGGGTGAGTGACT...TATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR CCA 90 bp TGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTTTATGGTTCATTACCTTCAAGTaGAGGCTTGCCTGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: CLLQYPLPGLMAVRRGLWFITFK*RLACGC
Trigger: GCAGCCACAGGCAAGCCTCCACTTGAAGGTAATGAA...CCATAAACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR-3UTR CCA 90 bp ATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACAGATGGGAGTGTTCATaGGTACCAAGCTTCTGCATT +
Preference number: 2 (lower is better)
Translates to: ISERPPLLVDVCSSLHENRWECS*VPSFCI
Trigger: AATGCAGAAGCTTGGTACCCATGAACACTCCCATCT...GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR-3UTR CCA 90 bp TGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTTTATGGCACACACCACACAGATaGGAGTGTTCATGGGTACCA +
Preference number: 2 (lower is better)
Translates to: CLLQYPLPGLMAVRRGLWHTPHR*ECSWVP
Trigger: TGGTACCCATGAACACTCCCATCTGTGTGGTGTGTG...CCATAAACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR CAA 90 bp GCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATaGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: ASWCLFITATVMTGR*SSSQQLGSAPSSSS
Trigger: GCTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR CCA 90 bp GTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTCCTTCAGCCTCTCGAGTAACTaGGATTACAGGCATGCACCA +
Preference number: 2 (lower is better)
Translates to: VGVCSLIQQLFNHRDSSFSLSSN*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGTTACTCGAGAGGCT...GAAGGAAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR CCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTGCGATGGCGCGATCTTaGCTCACTGTAACCTCTGCC +
Preference number: 2 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLAMARS*LTVTSA
Trigger: GGCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGC...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CCA 90 bp GGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTGGCGATGGCGCGATCTTaGCTCACTGTAACCTCTGCC +
Preference number: 2 (lower is better)
Translates to: GIASWCLFITATVMTGRLAMARS*LTVTSA
Trigger: GGCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGC...CAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR CCA 90 bp ATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATACAGGAATGCCGAGCATaGCTCCACACCAGCCGCAGA +
Preference number: 2 (lower is better)
Translates to: MSAPLCTRTGIASWCLFIQECRA*LHTSRR
Trigger: TCTGCGGCTGGTGTGGAGCCATGCTCGGCATTCCTG...TATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR CCA 90 bp GCATTCTTCTTTTGGATGCTTGCATTGCATCCCAGTAAAGTGGCGGTGCTCTCTCTCTTCCTTCCCCCGTaGGTCCGACTTCCTTCAGCA +
Preference number: 2 (lower is better)
Translates to: AFFFWMLALHPSKVAVLSLFLPP*VRLPSA
Trigger: TGCTGAAGGAAGTCGGACCCACGGGGGAAGGAAGAG...AGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGAATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR GCA 90 bp GAGGCCAACAGTCTGTGTTCCTATGTCCCTCTTAGTCCCAACATCAGATCTGGGGGGCTTTATCCCCACTaGACATCGACTCTTGTGATG +
Preference number: 2 (lower is better)
Translates to: EANSLCSYVPLSPNIRSGGLYPH*TSTLVM
Trigger: CATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCC...CCCAGATCTGATGTTGGGACTAAGAGGGACATAGGAACACAGACTGTTGGCCTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR-3UTR GCA 90 bp CTTTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGGCCCCCTCACAGGAGCTGTAGTGCAATTTaGCCTCCAAATCCATGTTCA +
Preference number: 2 (lower is better)
Translates to: LYPHCTSTLVMKAGPPHRSCSAI*PPNPCS
Trigger: TGAACATGGATTTGGAGGGCAAATTGCACTACAGCT...CCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR-3UTR GCA 90 bp GGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTGCTGACCGCTTACGTGTaGAAAACCGGGGGACTGGAA +
Preference number: 2 (lower is better)
Translates to: GIASWCLFITATVMTGRLLTAYV*KTGGLE
Trigger: TTCCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAG...CAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR-3UTR CCA 90 bp GTCCCTCTTAGTCCCAACATCAGATCTGGGCAAAGGAATATTCAGGGACTCAGAGGCTGTGGGACAGAATaGGAGGGACGTATCCCTACA +
Preference number: 2 (lower is better)
Translates to: VPLSPNIRSGQRNIQGLRGCGTE*EGRIPT
Trigger: TGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCC...TCTGAGTCCCTGAATATTCCTTTGCCCAGATCTGATGTTGGGACTAAGAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR-3UTR CCA 90 bp TGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTTTATGGTCCCAACATCAGATCTaGGCAAAGGAATATTCAGGG +
Preference number: 2 (lower is better)
Translates to: CLLQYPLPGLMAVRRGLWSQHQI*AKEYSG
Trigger: CCCTGAATATTCCTTTGCCCAGATCTGATGTTGGGA...CCATAAACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR-3UTR CCA 90 bp AAGTGGCGGTGCTCTCTCTTCCTGCAAGGCCAAGCAGAGTTGCTTCATGAAGAGGTCAGGAGGGGTTTATaGTCACTCATTTTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: KWRCSLFLQGQAELLHEEVRRGL*SLIFSC
Trigger: GCAGGAGAAAATGAGTGACCATAAACCCCTCCTGAC...CTCTTCATGAAGCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR TCA 90 bp CCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGCATAACACACAGTATCTCAGGTaGGCAGGATTTCCTGTACCA +
Preference number: 2 (lower is better)
Translates to: PSWVLQSRPGIQGCSEHNTQYLR*AGFPVP
Trigger: TGGTACAGGAAATCCTGCTCACCTGAGATACTGTGT...GTTATGCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR-3UTR TCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTAATCGGGCAGACAGGTaGTTGCTGGCCCCACATTTA +
Preference number: 2 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLNRADR*LLAPHL
Trigger: TAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATT...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR TCA 90 bp AGCAGAGCAGGAAAGGGAAAGGAGCCAGGCAAGATGCAGTTTCAGGCAAAGTCCAGCCTTGTACACTTGTaGACTCTTCATGCTAAAGGG +
Preference number: 2 (lower is better)
Translates to: SRAGKGKEPGKMQFQAKSSLVHL*TLHAKG
Trigger: CCCTTTAGCATGAAGAGTTCACAAGTGTACAAGGCT...GGACTTTGCCTGAAACTGCATCTTGCCTGGCTCCTTTCCCTTTCCTGCTCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR-3UTR GCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGTTGCCCAGGCTGGAGTaGGATGGCGCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALLPRLE*DGAILA
Trigger: AGCCAAGATCGCGCCATCGCACTCCAGCCTGGGCAA...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR GCA 90 bp CCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGCATAACTTTTTGCTAGCAGCTTaGCAGATGGGTAGAAGAGGC +
Preference number: 2 (lower is better)
Translates to: PSWVLQSRPGIQGCSEHNFLLAA*QMGRRG
Trigger: GCCTCTTCTACCCATCTGGCAAGCTGCTAGCAAAAA...GTTATGCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR-3UTR GCA 90 bp CTTTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGGCCCCCTCACAGGCATTCTTCTTTTGGATaGTTGCATTGCATCCCAGTA +
Preference number: 2 (lower is better)
Translates to: LYPHCTSTLVMKAGPPHRHSSFG*LHCIPV
Trigger: TACTGGGATGCAATGCAAGCATCCAAAAGAAGAATG...CCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR GCA 90 bp CGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTTTCTCATTATCTCCGTaGTTGTCAAACACTTCTGAC +
Preference number: 2 (lower is better)
Translates to: RVDCLHHSSWGLLPHPAAFSLSP*LSNTSD
Trigger: GTCAGAAGTGTTTGACAAGCACGGAGATAATGAGAA...AGCTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR-3UTR CCA 90 bp CCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCAATACAGAACAGTGTGTaGTTGGTTTGCTACCATTTG +
Preference number: 2 (lower is better)
Translates to: PHCWSMSAPLCTRTGIASIQNSV*LVCYHL
Trigger: CAAATGGTAGCAAACCAACCACACACTGTTCTGTAT...TGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR CCA 90 bp GTGAGCAGAGATGTGATCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATTCCCAACATCAGATCTaGGCAAAGGAATATTCAGGG +
Preference number: 2 (lower is better)
Translates to: VSRDVIQLSSPVPSSWADSQHQI*AKEYSG
Trigger: CCCTGAATATTCCTTTGCCCAGATCTGATGTTGGGA...ATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGATCACATCTCTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR-3UTR TCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTGCACGTATTCTTAAATaGAGTCCCGTGGAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLARILK*SPVEAS
Trigger: TGAGGCCTCCACGGGACTTCATTTAAGAATACGTGC...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR TCA 90 bp GATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATGCACGTATTCTTAAATaGAGTCCCGTGGAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: DVCSSLHENWNRFMVLIHARILK*SPVEAS
Trigger: TGAGGCCTCCACGGGACTTCATTTAAGAATACGTGC...ATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGTTGCCCAGGCTGGAGTaGGATGGCGCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: IQFITVHSILGAVHLVLMLPRLE*DGAILA
Trigger: AGCCAAGATCGCGCCATCGCACTCCAGCCTGGGCAA...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR GCA 90 bp GTATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGATATACCACATGTATGTaGATATCTAACTCTGCACAA +
Preference number: 2 (lower is better)
Translates to: VFLSGPHCWSMSAPLCTRYTTCM*ISNSAQ
Trigger: TTGTGCAGAGTTAGATATGCACATACATGTGGTATA...TCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR GCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTCAAGCTTCTGCATTCTaGACACAAGCCCATCTGAGC +
Preference number: 2 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLQASAF*TQAHLS
Trigger: GCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTG...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR-3UTR GCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTGGGTACCAAGCTTCTaGATTCTGCACACAAGCCCA +
Preference number: 2 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLWVPSF*ILHTSP
Trigger: TGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCA...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR-3UTR CCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGGCGATGGCGCGATCTTaGCTCACTGTAACCTCTGCC +
Preference number: 2 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALAMARS*LTVTSA
Trigger: GGCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGC...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CCA 90 bp AAGTGGCGGTGCTCTCTCTTCCTGCAAGGCCAAGCAGAGTTGCTTCATGAAGAGACTGGAATCGCTTCATaGTGCTTATTCATAACAGCC +
Preference number: 2 (lower is better)
Translates to: KWRCSLFLQGQAELLHEETGIAS*CLFITA
Trigger: GGCTGTTATGAATAAGCACCATGAAGCGATTCCAGT...CTCTTCATGAAGCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR CCA 90 bp TCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTGGCAAATTAAACTCTTaGACAGCATACCTTACTAAA +
Preference number: 2 (lower is better)
Translates to: SSCLLQYPLPGLMAVRRGGKLNS*TAYLTK
Trigger: TTTAGTAAGGTATGCTGTCCAAGAGTTTAATTTGCC...ACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR-3UTR GCA 90 bp ACAGTCTGTGTTCCTATGTCCCTCTTAGTCCCAACATCAGATCTGGGCAAAGGATTCAAGCGATTTTCCTaGCTCAGCCTCTCGAGTAAC +
Preference number: 2 (lower is better)
Translates to: TVCVPMSLLVPTSDLGKGFKRFS*LSLSSN
Trigger: GTTACTCGAGAGGCTGAGGCAGGAAAATCGCTTGAA...TCCTTTGCCCAGATCTGATGTTGGGACTAAGAGGGACATAGGAACACAGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR GCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGCTGCTGGTCGATGTCTaGTCCTCTCTGCACGAGAAC +
Preference number: 2 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALLLVDV*SSLHEN
Trigger: GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR CCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGGCGATGGCGCGATCTTaGCTCACTGTAACCTCTGCC +
Preference number: 2 (lower is better)
Translates to: IQFITVHSILGAVHLVLMAMARS*LTVTSA
Trigger: GGCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGC...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGGGCTGTGGGACAGAATaGGAGGGACGTATCCCTACA +
Preference number: 2 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALGCGTE*EGRIPT
Trigger: TGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCC...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CCA 90 bp GCATTCTTCTTTTGGATGCTTGCATTGCATCCCAGTAAAGTGGCGGTGCTCTCTTCTCTGCACGAGAACTaGAATCGCTTCATGGTGCTT +
Preference number: 2 (lower is better)
Translates to: AFFFWMLALHPSKVAVLSSLHEN*NRFMVL
Trigger: AAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGA...AGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR CCA 90 bp TCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAACAGCCAAATATGGGTaGGACAGGAGAGCCACATTC +
Preference number: 2 (lower is better)
Translates to: SAPLCTRTGIASWCLFITTAKYG*DRRATF
Trigger: GAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGT...TGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR-3UTR TCA 90 bp AACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGTCAGAAGGTGATCGCTaGAATTCACTGCCTTGTTCA +
Preference number: 2 (lower is better)
Translates to: NWNRFMVLIHNSHGYDGSSEGDR*NSLPCS
Trigger: TGAACAAGGCAGTGAATTTCAGCGATCACCTTCTGA...CGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR TCA 90 bp AGCAGGATTTCCTGTACCACAGGCCCGGCAAATTACCTTCTCCACTATTCTCTCTCAAAATCTCATTTCTaGAGGCTCACACAGCCTTGT +
Preference number: 2 (lower is better)
Translates to: SRISCTTGPANYLLHYSLSKSHF*RLTQPC
Trigger: ACAAGGCTGTGTGAGCCTTCAGAAATGAGATTTTGA...GAGAGAATAGTGGAGAAGGTAATTTGCCGGGCCTGTGGTACAGGAAATCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR-3UTR GCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAGGCGTAAGCCACTGTaGCAGCCATGCACGTATTCT +
Preference number: 2 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALRRKPL*QPCTYS
Trigger: AGAATACGTGCATGGCTGGCACAGTGGCTTACGCCT...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CCA 90 bp TCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAAGGTCGTATGCTGTCTaGCCTCCTGCATTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: SAPLCTRTGIASWCLFITRSYAV*PPAFFF
Trigger: AAAGAAGAATGCAGGAGGCCAGACAGCATACGACCT...TGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR TCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACAATCGGGCAGACAGGTaGTTGCTGGCCCCACATTTA +
Preference number: 2 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNNRADR*LLAPHL
Trigger: TAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATT...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR TCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACGGCAGTGGGCACACTTaGGAAAGTCTGTCTCCCTTT +
Preference number: 2 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNGSGHT*ESLSPF
Trigger: AAAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCC...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGAGGCGTAAGCCACTGTaGCAGCCATGCACGTATTCT +
Preference number: 2 (lower is better)
Translates to: IQFITVHSILGAVHLVLMRRKPL*QPCTYS
Trigger: AGAATACGTGCATGGCTGGCACAGTGGCTTACGCCT...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR GCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATATTGCCCAGGCTGGAGTaGGATGGCGCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: GLLRADLSIKEHTIMMGILPRLE*DGAILA
Trigger: AGCCAAGATCGCGCCATCGCACTCCAGCCTGGGCAA...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR TCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGGCACGTATTCTTAAATaGAGTCCCGTGGAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: IQFITVHSILGAVHLVLMARILK*SPVEAS
Trigger: TGAGGCCTCCACGGGACTTCATTTAAGAATACGTGC...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR TCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGACACAGTATCTCAGGTaGGCAGGATTTCCTGTACCA +
Preference number: 2 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALTQYLR*AGFPVP
Trigger: TGGTACAGGAAATCCTGCTCACCTGAGATACTGTGT...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR GCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGTTCAAGCGATTTTCCTaGCTCAGCCTCTCGAGTAAC +
Preference number: 2 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALFKRFS*LSLSSN
Trigger: GTTACTCGAGAGGCTGAGGCAGGAAAATCGCTTGAA...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGAGCCTCTCGAGTAACTaGGATTACAGGCATGCACCA +
Preference number: 2 (lower is better)
Translates to: IQFITVHSILGAVHLVLMSLSSN*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGTTACTCGAGAGGCT...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAGGTCGTATGCTGTCTaGCCTCCTGCATTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALRSYAV*PPAFFF
Trigger: AAAGAAGAATGCAGGAGGCCAGACAGCATACGACCT...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGTTCAAGCGATTTTCCTaGCTCAGCCTCTCGAGTAAC +
Preference number: 2 (lower is better)
Translates to: IQFITVHSILGAVHLVLMFKRFS*LSLSSN
Trigger: GTTACTCGAGAGGCTGAGGCAGGAAAATCGCTTGAA...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR GCA 90 bp TCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAATCGCTGAAATTCACTaGCTTGTTCAGGTAAAGGTT +
Preference number: 2 (lower is better)
Translates to: SAPLCTRTGIASWCLFITIAEIH*LVQVKV
Trigger: AACCTTTACCTGAACAAGGCAGTGAATTTCAGCGAT...TGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR GCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAAGGCGTAAGCCACTGTaGCAGCCATGCACGTATTCT +
Preference number: 2 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIRRKPL*QPCTYS
Trigger: AGAATACGTGCATGGCTGGCACAGTGGCTTACGCCT...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CCA 90 bp CAGGCCCGGCAAATTACCTTCTCCACTATTCTCTCAGGATACAATCTTTTTCCAAAACTGACTTTGGCCTaGCCAGTTATTCAAAATCTC +
Preference number: 2 (lower is better)
Translates to: QARQITFSTILSGYNLFPKLTLA*PVIQNL
Trigger: GAGATTTTGAATAACTGGCCAGGCCAAAGTCAGTTT...TGGAAAAAGATTGTATCCTGAGAGAATAGTGGAGAAGGTAATTTGCCGGGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR-3UTR TCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAGCACGTATTCTTAAATaGAGTCCCGTGGAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIARILK*SPVEAS
Trigger: TGAGGCCTCCACGGGACTTCATTTAAGAATACGTGC...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAAGCCTCTCGAGTAACTaGGATTACAGGCATGCACCA +
Preference number: 2 (lower is better)
Translates to: GLLRADLSIKEHTIMMGISLSSN*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGTTACTCGAGAGGCT...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR CAA 90 bp CAAATTACCTTCTCCACTATTCTCTCAGGATACAATCTTTTTCCATaGATAATGACCAGTGGTGCTCAAGTGTTCCTTTCTAGTCCAGCA +
Preference number: 2 (lower is better)
Translates to: QITFSTILSGYNLFP*IMTSGAQVFLSSPA
Trigger: TGCTGGACTAGAAAGGAACACTTGAGCACCACTGGTCATTATCAATGGAAAAAGATTGTATCCTGAGAGAATAGTGGAGAAGGTAATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR-3UTR GCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATATTCAAGCGATTTTCCTaGCTCAGCCTCTCGAGTAAC +
Preference number: 2 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIFKRFS*LSLSSN
Trigger: GTTACTCGAGAGGCTGAGGCAGGAAAATCGCTTGAA...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATATCACAACCATCTTCGTaGACAGTAGCAGAGATAAGC +
Preference number: 2 (lower is better)
Translates to: GLLRADLSIKEHTIMMGISQPSS*TVAEIS
Trigger: GCTTATCTCTGCTACTGTCCACGAAGATGGTTGTGA...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAATACAGAACAGTGTGTaGTTGGTTTGCTACCATTTG +
Preference number: 2 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIIQNSV*LVCYHL
Trigger: CAAATGGTAGCAAACCAACCACACACTGTTCTGTAT...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR GCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATATATACCACATGTATGTaGATATCTAACTCTGCACAA +
Preference number: 2 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIYTTCM*ISNSAQ
Trigger: TTGTGCAGAGTTAGATATGCACATACATGTGGTATA...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR GCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAACAGACATGTTTATATaGTATGTGTACTCCTCTGTA +
Preference number: 2 (lower is better)
Translates to: GLLRADLSIKEHTIMMGITDMFI*YVYSSV
Trigger: TACAGAGGAGTACACATAGCATATAAACATGTCTGT...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CAA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGTGCGATGGCGCGATCTaGGCTCACTGTAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWCDGAI*AHCNLC
Trigger: GCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGCA...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR TCA 72 bp CGGGAAAGGCAAGTCGACGCTGATGTCATTGCTGGCTaGGGAGAGAGGTGGTGGCTGTGGGACAGAATGGGA +
Preference number: 3 (lower is better)
Translates to: RERQVDADVIAG*GERWWLWDRMG
Trigger: TCCCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGTCGACTTGCCTTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CAA 90 bp CCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGTGCGATGGCGCGATCTaGGCTCACTGTAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: PLLVDVCSSLHENWNRFMCDGAI*AHCNLC
Trigger: GCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGCA...CATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR CAA 90 bp CCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCAGCTGAGGCTCCTAGTTaGAGCGAGTTGGTCCTCAAG +
Preference number: 3 (lower is better)
Translates to: PHCWSMSAPLCTRTGIASAEAPS*SELVLK
Trigger: CTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAGC...TGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR TCA 72 bp CAGCCAAATATGGGTGGGACAGGAGAGCCACATTCTTaGCAGAAGCGAGCAAAGGGATCTGATGGCCGGGGG +
Preference number: 3 (lower is better)
Translates to: QPNMGGTGEPHS*QKRAKGSDGRG
Trigger: CCCCCGGCCATCAGATCCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCTGTCCCACCCATATTTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR GCA 72 bp AGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTaGACGAGAACTGGAATCGCTTCATGGTGCTTATTC +
Preference number: 3 (lower is better)
Translates to: SGPHCWSMSAPL*TRTGIASWCLF
Trigger: GAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR CCA 72 bp TCCTTCTGGGGGTGGGAGACGACAGCCAAATATGGGTaGGACAGGAGAGCCACATTCTTGACAGAAGCGAGC +
Preference number: 3 (lower is better)
Translates to: SFWGWETTAKYG*DRRATFLTEAS
Trigger: GCTCGCTTCTGTCAAGAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR CCA 72 bp GAGCTCCTTCTGGGGGTGGGAGACGACAGCCAAATATaGGTGGGACAGGAGAGCCACATTCTTGACAGAAGC +
Preference number: 3 (lower is better)
Translates to: ELLLGVGDDSQI*VGQESHILDRS
Trigger: GCTTCTGTCAAGAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR CCA 72 bp TTCTGCACACAAGCCCATCTGAGCTCCTTCTGGGGGTaGGAGACGACAGCCAAATATGGGTGGGACAGGAGA +
Preference number: 3 (lower is better)
Translates to: FCTQAHLSSFWG*ETTAKYGWDRR
Trigger: TCTCCTGTCCCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGTGCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR CCA 72 bp TCTGCATTCTGCACACAAGCCCATCTGAGCTCCTTCTaGGGGTGGGAGACGACAGCCAAATATGGGTGGGAC +
Preference number: 3 (lower is better)
Translates to: SAFCTQAHLSSF*GWETTAKYGWD
Trigger: GTCCCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGTGCAGAATGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR-3UTR CAA 90 bp AAGTGGCGGTGCTCTCTCTTCCTGCAAGGCCAAGCAGAGTTGCTTCATGAAGAGCCTTCAAGTGGAGGCTaGCCTGTGGCTGCAGCTGTA +
Preference number: 3 (lower is better)
Translates to: KWRCSLFLQGQAELLHEEPSSGG*PVAAAV
Trigger: TACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGG...CTCTTCATGAAGCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR CAA 90 bp TTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGGCCCCCTCACAGGTGAGGCAGTGGGCACACTaGAGAAAGTCTGTCTCCCTT +
Preference number: 3 (lower is better)
Translates to: LSPLHIDSCDEGRAPSQVRQWAH*RKSVSL
Trigger: AAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCT...CACCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR GCA 72 bp TGTATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTaGTCCTCTCTGCACGAGAACTGGAATCGCTTCATG +
Preference number: 3 (lower is better)
Translates to: CISERPPLLVDV*SSLHENWNRFM
Trigger: CATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR GCA 72 bp GATGGGAGTGTTCATGGGTACCAAGCTTCTGCATTCTaGACACAAGCCCATCTGAGCTCCTTCTGGGGGTGG +
Preference number: 3 (lower is better)
Translates to: DGSVHGYQASAF*TQAHLSSFWGW
Trigger: CCACCCCCAGAAGGAGCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCATGAACACTCCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR CCA 72 bp GAGGGGCCTCACACACCACACAGATGGGAGTGTTCATaGGTACCAAGCTTCTGCATTCTGCACACAAGCCCA +
Preference number: 3 (lower is better)
Translates to: EGPHTPHRWECS*VPSFCILHTSP
Trigger: TGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCATGAACACTCCCATCTGTGTGGTGTGTGAGGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR TCA 72 bp CAAGCCCTTGGCCAAACTTGGCAGCAAAGAGTGAGGTaGCAAGGTCATCTCCAGTGTTCAGAGCCAGGTCGT +
Preference number: 3 (lower is better)
Translates to: QALGQTWQQRVR*QGHLQCSEPGR
Trigger: ACGACCTGGCTCTGAACACTGGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAGTTTGGCCAAGGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR GCA 72 bp CCAACATCAGATCTGGGCAAAGGAATATTCAGGGACTaGCAGGCACATCGGGGCTCAGAAAAAGGGCGAGGT +
Preference number: 3 (lower is better)
Translates to: PTSDLGKGIFRD*QAHRGSEKGRG
Trigger: ACCTCGCCCTTTTTCTGAGCCCCGATGTGCCTGGCAGTCCCTGAATATTCCTTTGCCCAGATCTGATGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000460891.5
3UTR CCA 72 bp GCTGTAGAGCAAGAGGGGCCTCACACACCACACAGATaGGAGTGTTCATGGGTACCAAGCTTCTGCATTCTG +
Preference number: 3 (lower is better)
Translates to: AVEQEGPHTPHR*ECSWVPSFCIL
Trigger: CAGAATGCAGAAGCTTGGTACCCATGAACACTCCCATCTGTGTGGTGTGTGAGGCCCCTCTTGCTCTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR-3UTR CAA 90 bp GCAGCTAGAGCCAGGCTTCTGTCCAAGCTAAGTTTCACTAGGGACTTCACACAACCTTCAAGTGGAGGCTaGCCTGTGGCTGCAGCTGTA +
Preference number: 3 (lower is better)
Translates to: AARARLLSKLSFTRDFTQPSSGG*PVAAAV
Trigger: TACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGG...TTGTGTGAAGTCCCTAGTGAAACTTAGCTTGGACAGAAGCCTGGCTCTAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR-3UTR CAA 90 bp CCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCAGTTCCTGTTCCTTTTTaGCTAGCAGCTTGCCAGATG +
Preference number: 3 (lower is better)
Translates to: PHCWSMSAPLCTRTGIASVPVPF*LAACQM
Trigger: CATCTGGCAAGCTGCTAGCAAAAAAGGAACAGGAAC...TGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR CAA 90 bp AAGGCCAAGCAGAGTTGCTTCATGAAGAGCTGTATTTCTGAGCGGCCCCCACTGAGGAGAGCCACATTCTaGACAGAAGCGAGCAAAGGG +
Preference number: 3 (lower is better)
Translates to: KAKQSCFMKSCISERPPLRRATF*TEASKG
Trigger: CCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCT...CAGTGGGGGCCGCTCAGAAATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR TCA 72 bp CAAATACCACAGGAGCCACAGAATCGGGCAGACAGGTaGTTGCTGGCCCCACATTTAGGGCAAACAGAACAG +
Preference number: 3 (lower is better)
Translates to: QIPQEPQNRADR*LLAPHLGQTEQ
Trigger: CTGTTCTGTTTGCCCTAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATTCTGTGGCTCCTGTGGTATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
3UTR TCA 72 bp GTAAGCCACTGTGCCAGCCATGCACGTATTCTTAAATaGAGTCCCGTGGAGGCCTCAGGGCTAACAGTCATC +
Preference number: 3 (lower is better)
Translates to: VSHCASHARILK*SPVEASGLTVI
Trigger: GATGACTGTTAGCCCTGAGGCCTCCACGGGACTTCATTTAAGAATACGTGCATGGCTGGCACAGTGGCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTGCGATGGCGCGATCTaGGCTCACTGTAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLCDGAI*AHCNLC
Trigger: GCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGCA...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CAA 90 bp GCATTCTTCTTTTGGATGCTTGCATTGCATCCCAGTAAAGTGGCGGTGCTCTCTTGCGATGGCGCGATCTaGGCTCACTGTAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: AFFFWMLALHPSKVAVLSCDGAI*AHCNLC
Trigger: GCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGCA...AGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR CAA 90 bp TCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACCCTTCAAGTGGAGGCTaGCCTGTGGCTGCAGCTGTA +
Preference number: 3 (lower is better)
Translates to: SSLHENWNRFMVLIHNSHPSSGG*PVAAAV
Trigger: TACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGG...GTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR GCA 72 bp GACAGTAGCAGAGATAAGCTTTCCCATCCTGGGTTCTaGAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGC +
Preference number: 3 (lower is better)
Translates to: DSSRDKLSHPGF*NQGPEFRVVLS
Trigger: GCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGAAAGCTTATCTCTGCTACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR GCA 72 bp GCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTaGTTATTCATAACAGCCACGGTTATGACGGGTCGA +
Preference number: 3 (lower is better)
Translates to: APLCTRTGIASW*LFITATVMTGR
Trigger: TCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR GCA 72 bp TTTGGATGCTTGCATTGCATCCCAGTAAAGTGGCGGTaGTCTCTCTTCCTGCAAGGCCAAGCAGAGTTGCTT +
Preference number: 3 (lower is better)
Translates to: FGCLHCIPVKWR*SLFLQGQAELL
Trigger: AAGCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR GCA 72 bp GACAAGGTCATCTCCAGTGTTCAGAGCCAGGTCGTATaGTGTCTGGCCTCCTGCATTCTTCTTTTGGATGCT +
Preference number: 3 (lower is better)
Translates to: DKVISSVQSQVV*CLASCILLLDA
Trigger: AGCATCCAAAAGAAGAATGCAGGAGGCCAGACAGCATACGACCTGGCTCTGAACACTGGAGATGACCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR GCA 72 bp AAAGCAGAGCAGGAAAGGGAAAGGAGCCAGGCAAGATaGAGTTTCAGGCAAAGTCCATGGAGGGTTCCTTCA +
Preference number: 3 (lower is better)
Translates to: KAEQERERSQAR*SFRQSPWRVPS
Trigger: TGAAGGAACCCTCCATGGACTTTGCCTGAAACTGCATCTTGCCTGGCTCCTTTCCCTTTCCTGCTCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR CCA 72 bp CTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTaGAATCGCTTCATGGTGCTTATTCATAACAGCCAC +
Preference number: 3 (lower is better)
Translates to: LLVDVCSSLHEN*NRFMVLIHNSH
Trigger: GTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR CCA 72 bp AGGTCGTATGCTGTCTGGCCTCCTGCATTCTTCTTTTaGATGCTTGCATTGCATCCCAGTAAAGTGGCGGTG +
Preference number: 3 (lower is better)
Translates to: RSYAVWPPAFFF*MLALHPSKVAV
Trigger: CACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGAATGCAGGAGGCCAGACAGCATACGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR-3UTR CAA 90 bp CTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCAGAACAGTGTGTGGTaGGTTTGCTACCATTTGTTT +
Preference number: 3 (lower is better)
Translates to: LLVDVCSSLHENWNRFMVQNSVW*VCYHLF
Trigger: AAACAAATGGTAGCAAACCAACCACACACTGTTCTG...CACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR CAA 90 bp GTATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGATTATTGAGAGCTGATTaGTCAATCAAAGAACACACC +
Preference number: 3 (lower is better)
Translates to: VFLSGPHCWSMSAPLCTRLLRAD*SIKEHT
Trigger: GGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAA...TCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR-3UTR CAA 90 bp CTTTCCCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGCATATTAGCTTATCAATaGTTACCCCATCCTGGCGGG +
Preference number: 3 (lower is better)
Translates to: LSHPGFCNQGPEFRVVLSILAYQ*LPHPGG
Trigger: CCCGCCAGGATGGGGTAACAATTGATAAGCTAATAT...GCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR TCA 72 bp CATCACCCTCGGCAGCACTGCTCAGAAGGTGATCGCTaGAATTCACTGCCTTGTTCAGGTAAAGGTTCTTGT +
Preference number: 3 (lower is better)
Translates to: HHPRQHCSEGDR*NSLPCSGKGSC
Trigger: ACAAGAACCTTTACCTGAACAAGGCAGTGAATTTCAGCGATCACCTTCTGAGCAGTGCTGCCGAGGGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
3UTR TCA 72 bp AGTTTCAGGCAAAGTCCATGGAGGGTTCCTTCAGCCTaGTCCCGTGGACACTTGTGGAGTGGAAATTTCATC +
Preference number: 3 (lower is better)
Translates to: SFRQSPWRVPSA*SRGHLWSGNFI
Trigger: GATGAAATTTCCACTCCACAAGTGTCCACGGGATCAGGCTGAAGGAACCCTCCATGGACTTTGCCTGAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR CCA 72 bp TCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATaGTGCTTATTCATAACAGCCACGGTTATGACGGGT +
Preference number: 3 (lower is better)
Translates to: SAPLCTRTGIAS*CLFITATVMTG
Trigger: ACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR CCA 72 bp TCATCTCCAGTGTTCAGAGCCAGGTCGTATGCTGTCTaGCCTCCTGCATTCTTCTTTTGGATGCTTGCATTG +
Preference number: 3 (lower is better)
Translates to: SSPVFRARSYAV*PPAFFFWMLAL
Trigger: CAATGCAAGCATCCAAAAGAAGAATGCAGGAGGCCAGACAGCATACGACCTGGCTCTGAACACTGGAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
3UTR TCA 72 bp CATCACCCTCGGCAGCACTGCTCAGAAGGTGATCGCTaGAATTCACTGCCTTGTTCAGGTAAAGGTTCTTTA +
Preference number: 3 (lower is better)
Translates to: HHPRQHCSEGDR*NSLPCSGKGSL
Trigger: TAAAGAACCTTTACCTGAACAAGGCAGTGAATTTCAGCGATCACCTTCTGAGCAGTGCTGCCGAGGGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609267.5
3UTR-3UTR CAA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGTGCGATGGCGCGATCTaGGCTCACTGTAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: IQFITVHSILGAVHLVLMCDGAI*AHCNLC
Trigger: GCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGCA...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CAA 90 bp GCAGAGCAGGAAAGGGAAAGGAGCCAGGCAAGATGCAGTTTCAGGCAAAGTCCATTCTCTGAATACATTTaGCCCATATACAACCCACAA +
Preference number: 3 (lower is better)
Translates to: AEQERERSQARCSFRQSPFSEYI*PIYNPQ
Trigger: TTGTGGGTTGTATATGGGCAAAATGTATTCAGAGAA...TGGACTTTGCCTGAAACTGCATCTTGCCTGGCTCCTTTCCCTTTCCTGCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR-3UTR CAA 90 bp CAGGCCCGGCAAATTACCTTCTCCACTATTCTCTCAGGATACAATCTTTTTCCAGTCCTGAAACTGACTTaGGCCTGGCCAGTTATTCAA +
Preference number: 3 (lower is better)
Translates to: QARQITFSTILSGYNLFPVLKLT*AWPVIQ
Trigger: TTGAATAACTGGCCAGGCCAAAGTCAGTTTCAGGAC...TGGAAAAAGATTGTATCCTGAGAGAATAGTGGAGAAGGTAATTTGCCGGGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR GCA 72 bp GTACTCCTCTGTACATGTGCTTATACCACATGTATGTaGATATCTAACTCTGCACAACCCCGGGAAAGGCAA +
Preference number: 3 (lower is better)
Translates to: VLLCTCAYTTCM*ISNSAQPRERQ
Trigger: TTGCCTTTCCCGGGGTTGTGCAGAGTTAGATATGCACATACATGTGGTATAAGCACATGTACAGAGGAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR GCA 72 bp GAAAGTCTGTCTCCCTTTGAATTCTCATTATCTCCGTaGTTGTCAAACACTTCTGACCGCTTACGTGTGCAA +
Preference number: 3 (lower is better)
Translates to: ESLSPFEFSLSP*LSNTSDRLRVQ
Trigger: TTGCACACGTAAGCGGTCAGAAGTGTTTGACAAGCACGGAGATAATGAGAATTCAAAGGGAGACAGACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608192.5
3UTR CCA 72 bp CCATATACAACCCACAAGGCCATTTTAGGAGTGTTATaGCCTGTACATAATGCCATGCATTTCCCTTATTGC +
Preference number: 3 (lower is better)
Translates to: PYTTHKAILGVL*PVHNAMHFPYC
Trigger: GCAATAAGGGAAATGCATGGCATTATGTACAGGCCATAACACTCCTAAAATGGCCTTGTGGGTTGTATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR-3UTR CAA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGCAGAACAGTGTGTGGTaGGTTTGCTACCATTTGTTT +
Preference number: 3 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALQNSVW*VCYHLF
Trigger: AAACAAATGGTAGCAAACCAACCACACACTGTTCTG...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CAA 90 bp TCTGAATACATTTTGCCCATATACAACCCACAAGGCCATTTTAGGAGTGTTATGGTTCCTGTTCCTTTTTaGCTAGCAGCTTGCCAGATG +
Preference number: 3 (lower is better)
Translates to: SEYILPIYNPQGHFRSVMVPVPF*LAACQM
Trigger: CATCTGGCAAGCTGCTAGCAAAAAAGGAACAGGAAC...CATAACACTCCTAAAATGGCCTTGTGGGTTGTATATGGGCAAAATGTATTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR-3UTR CAA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGCAGTGTGTGGTTGGTTaGCTACCATTTGTTTTAAAA +
Preference number: 3 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALQCVVG*LPFVLK
Trigger: TTTTAAAACAAATGGTAGCAAACCAACCACACACTG...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR-3UTR CAA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATATCATTATCTCCGTGCTaGTCAAACACTTCTGACCGC +
Preference number: 3 (lower is better)
Translates to: GLLRADLSIKEHTIMMGISLSPC*SNTSDR
Trigger: GCGGTCAGAAGTGTTTGACAAGCACGGAGATAATGA...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR GCA 90 bp GCCTGTGGCTGCAGCTGTAGAGCAAGAGGGGCCTCACACACCACACAGATGGGAAATGGGACTGTGTCTTaGCTGGGACTGGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ACGCSCRARGASHTTQMGNGTVS*LGLAGG
Trigger: CCCACCCGCCAGTCCCAGGCAAGACACAGTCCCATT...TCCCATCTGTGTGGTGTGTGAGGCCCCTCTTGCTCTACAGCTGCAGCCACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR CCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGGCAAAACCGGGGGACTaGGACTGGCGGGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWAKPGD*DWRVGG
Trigger: ACCACCCACCCGCCAGTCCCAGTCCCCCGGTTTTGC...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
CDS-3UTR TCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGGCACACAAGCCCATCTaGGCTCCTTCTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWAHKPI*APSGGG
Trigger: CCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGTGC...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp GACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTGAGCGGCCCCCACTaGTGGTCGATGTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: DGSIVFITAVGVCSLIQQLSGPH*WSMSAP
Trigger: AGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAG...CTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGCCTCACCAGGTGAAGTaGCCAAGGCAGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWPHQVK*PRQEAG
Trigger: CCCTGCCTCCTGCCTTGGCCACTTCACCTGGTGAGG...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
3UTR CAA 72 bp CACAACCCCGGGAAAGGCAAGTCGACGCTGATGTCATaGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: HNPGKGKSTLMS*LAEERGGGCGT
Trigger: TGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGTCGACTTGCCTTTCCCGGGGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp TGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTTTATGGGCACACAAGCCCATCTaGGCTCCTTCTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CLLQYPLPGLMAVRRGLWAHKPI*APSGGG
Trigger: CCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGTGC...CCATAAACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR TCA 90 bp CGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTGGGCCCCCTCACAGGTaGCACAGTATCTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RVDCLHHSSWGLLPHPAAGPPHR*HSISGE
Trigger: CTCACCTGAGATACTGTGTCACCTGTGAGGGGGCCC...AGCTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGACCCTCTTCCTGGGCTaGTGGCTGTCAGGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWTLFLG*WLSGGV
Trigger: AACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGT...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GGCTCAGAAAAAGGGCGAGGTTCCTCAGCAGCTAGAGCCAGGCTTCTGTCCAAGACCCTCTTCCTGGGCTaGTGGCTGTCAGGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GSEKGRGSSAARARLLSKTLFLG*WLSGGV
Trigger: AACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGT...CTTGGACAGAAGCCTGGCTCTAGCTGCTGAGGAACCTCGCCCTTTTTCTGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000460891.5
CDS-3UTR GCA 90 bp GTGAGCAGAGATGTGATCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATCTCTCTCTCGCCTCTTaGCTCCTCCTTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VSRDVIQLSSPVPSSWADLSLAS*LLLRRR
Trigger: GCGGCGGCGAAGGAGGAGGCAAGAGGCGAGAGAGAG...ATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGATCACATCTCTGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377630.9
CDS-3UTR GCA 90 bp GCCTGTGGCTGCAGCTGTAGAGCAAGAGGGGCCTCACACACCACACAGATGGGACAGAGCCAGGTCGTATaGTGTCTGGCCTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: ACGCSCRARGASHTTQMGQSQVV*CLASCI
Trigger: AATGCAGGAGGCCAGACAGCATACGACCTGGCTCTG...TCCCATCTGTGTGGTGTGTGAGGCCCCTCTTGCTCTACAGCTGCAGCCACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR GCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGTTGCCCAGGCTGGAGTaGGATGGCGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWLPRLE*DGAILA
Trigger: AGCCAAGATCGCGCCATCGCACTCCAGCCTGGGCAA...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GCCACGGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCCCGCCCACTGGGTGCTaGGCAGATGATTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: ATVMTGRLSSSQQLGSAPPPTGC*ADDWWR
Trigger: TCTCCACCAATCATCTGCCCAGCACCCAGTGGGCGG...GGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACCGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR CCA 90 bp TTGGCAGCAAAGAGTGAGGTGACAAGGTCATCTCCAGTGTTCAGAGCCAGGTCGGCAAAACCGGGGGACTaGGACTGGCGGGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LAAKSEVTRSSPVFRARSAKPGD*DWRVGG
Trigger: ACCACCCACCCGCCAGTCCCAGTCCCCCGGTTTTGC...CGACCTGGCTCTGAACACTGGAGATGACCTTGTCACCTCACTCTTTGCTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR CCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGCAGGAATGCCGAGCATaGCTCCACACCAGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWQECRA*LHTSRR
Trigger: TCTGCGGCTGGTGTGGAGCCATGCTCGGCATTCCTG...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp GCCACGGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCCAGGAATGCCGAGCATaGCTCCACACCAGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: ATVMTGRLSSSQQLGSAPQECRA*LHTSRR
Trigger: TCTGCGGCTGGTGTGGAGCCATGCTCGGCATTCCTG...GGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp ATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACCTCTTCCTTCCCCCGTaGGTCCGACTTCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ISERPPLLVDVCSSLHENLFLPP*VRLPSA
Trigger: TGCTGAAGGAAGTCGGACCCACGGGGGAAGGAAGAG...GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp CAAGCCCATCTGAGCTCCTTCTGGGGGTGGGAGACGACAGCCAAATATGGGTGGGCGATGGCGCGATCTTaGCTCACTGTAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QAHLSSFWGWETTAKYGWAMARS*LTVTSA
Trigger: GGCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGC...CCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCTCAGATGGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR CCA 90 bp TCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTTGTCTTGCCTGGGACTaGCGGGTGGGTGGTCTAGAA +
Preference number: 4 (lower is better)
Translates to: SSCLLQYPLPGLMAVRRGCLAWD*RVGGLE
Trigger: TTCTAGACCACCCACCCGCCAGTCCCAGGCAAGACA...ACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR TCA 90 bp GGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCGCACACAAGCCCATCTaGGCTCCTTCTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GYDGSIVFITAVGVCSLIAHKPI*APSGGG
Trigger: CCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGTGC...GATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp CTCACAGGTGACACAGTATCTCAGGTGAGCAGGATTTCCTGTACCACAGGCCCGGGGCCCCCTCACAGGTaGCACAGTATCTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LTGDTVSQVSRISCTTGPGPPHR*HSISGE
Trigger: CTCACCTGAGATACTGTGTCACCTGTGAGGGGGCCC...CGGGCCTGTGGTACAGGAAATCCTGCTCACCTGAGATACTGTGTCACCTGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR GCA 90 bp AAGTGGCGGTGCTCTCTCTTCCTGCAAGGCCAAGCAGAGTTGCTTCATGAAGAGCTGAGCGGCCCCCACTaGTGGTCGATGTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: KWRCSLFLQGQAELLHEELSGPH*WSMSAP
Trigger: AGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAG...CTCTTCATGAAGCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GTATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGACCAGTAAAGTGGCGGTaGTCTCTCTTCCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: VFLSGPHCWSMSAPLCTRPVKWR*SLFLQG
Trigger: GCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGG...TCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp CTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGTTGCCCAGGCTGGAGTaGGATGGCGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LLVDVCSSLHENWNRFMVLPRLE*DGAILA
Trigger: AGCCAAGATCGCGCCATCGCACTCCAGCCTGGGCAA...CACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGCTCTTCCTTCCCCCGTaGGTCCGACTTCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWLFLPP*VRLPSA
Trigger: TGCTGAAGGAAGTCGGACCCACGGGGGAAGGAAGAG...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp CAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTAGCGGCCCCCACTGCTaGTCGATGTCTGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QQLGSAPSSSSCSITETLSGPHC*SMSAPL
Trigger: GAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCT...AAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAACTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGGCGATGGCGCGATCTTaGCTCACTGTAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: DGSIVFITAVGVCSLIQQAMARS*LTVTSA
Trigger: GGCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGC...CTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GGCGGAGGAGGGGCTTTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGTGTAATCCAGCACTTTaGGAGGCTGAGGTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: GGGGALSPLHIDSCDEGRCNPAL*EAEVGA
Trigger: TGCGCCCACCTCAGCCTCCCAAAGTGCTGGATTACA...CCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCCCTCCTCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR TCA 90 bp GCCTGTGGCTGCAGCTGTAGAGCAAGAGGGGCCTCACACACCACACAGATGGGACTGAGGGACACACACTaGACCAGCAGTCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: ACGCSCRARGASHTTQMGLRDTH*TSSHFL
Trigger: GAGAAAATGACTGCTGGTTCAGTGTGTGTCCCTCAG...TCCCATCTGTGTGGTGTGTGAGGCCCCTCTTGCTCTACAGCTGCAGCCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR TCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGGGGTGGTCTAGAACCTaGTCCTCCACCATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWGWSRT*SSTISW
Trigger: CCAGCTTATGGTGGAGGATCAGGTTCTAGACCACCC...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000608192.5
CDS-3UTR TCA 90 bp GGCGGAGGAGGGGCTTTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGGGCAGTGGGCACACTTaGGAAAGTCTGTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GGGGALSPLHIDSCDEGRGSGHT*ESLSPF
Trigger: AAAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCC...CCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCCCTCCTCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR TCA 90 bp TCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTAATCGGGCAGACAGGTaGTTGCTGGCCCCACATTTA +
Preference number: 4 (lower is better)
Translates to: SSCLLQYPLPGLMAVRRGNRADR*LLAPHL
Trigger: TAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATT...ACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR TCA 90 bp GTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTCCTTCACCCTCTTCCTGGGCTaGTGGCTGTCAGGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: VGVCSLIQQLFNHRDSSFTLFLG*WLSGGV
Trigger: AACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGT...GAAGGAAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp CAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTACCCTCTTCCTGGGCTaGTGGCTGTCAGGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: QQLGSAPSSSSCSITETLTLFLG*WLSGGV
Trigger: AACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGT...AAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAACTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp CGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTCTGAGGCTCCTAGTTTaGGCGAGTTGGTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: RVDCLHHSSWGLLPHPAALRLLV*ASWSSS
Trigger: GCTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAG...AGCTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp TCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTTCCCATCCTGGGTTCTaGAATCAAGGCCCGGAATTC +
Preference number: 4 (lower is better)
Translates to: SSCLLQYPLPGLMAVRRGSHPGF*NQGPEF
Trigger: GAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGA...ACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR GCA 90 bp CAAGCCCATCTGAGCTCCTTCTGGGGGTGGGAGACGACAGCCAAATATGGGTGGTCCCATCCTGGGTTCTaGAATCAAGGCCCGGAATTC +
Preference number: 4 (lower is better)
Translates to: QAHLSSFWGWETTAKYGWSHPGF*NQGPEF
Trigger: GAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGA...CCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCTCAGATGGGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR GCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGCTGCTGGTCGATGTCTaGTCCTCTCTGCACGAGAAC +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWLLVDV*SSLHEN
Trigger: GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp CGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTCTGCTGGTCGATGTCTaGTCCTCTCTGCACGAGAAC +
Preference number: 4 (lower is better)
Translates to: RVDCLHHSSWGLLPHPAALLVDV*SSLHEN
Trigger: GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG...AGCTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp TTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGGCCCCCTCACAGGTGGGTGCTCTCTCTTCCTaGAAGGCCAAGCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: LSPLHIDSCDEGRAPSQVGALSS*KAKQSC
Trigger: GCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACC...CACCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGCCAGTAAAGTGGCGGTaGTCTCTCTTCCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWPVKWR*SLFLQG
Trigger: GCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGG...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGCAGAGCCAGGTCGTATaGTGTCTGGCCTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWQSQVV*CLASCI
Trigger: AATGCAGGAGGCCAGACAGCATACGACCTGGCTCTG...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GAGGCTCCTAGTTTGAGCGAGTTGGTCCTCAAGCCCTTGGCCAAACTTGGCAGCCAGAGCCAGGTCGTATaGTGTCTGGCCTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: EAPSLSELVLKPLAKLGSQSQVV*CLASCI
Trigger: AATGCAGGAGGCCAGACAGCATACGACCTGGCTCTG...GCTGCCAAGTTTGGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGGAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GAGGCCAACAGTCTGTGTTCCTATGTCCCTCTTAGTCCCAACATCAGATCTGGGCCCCTAATGCATCTCTaGCGCGCCCAACCCAGTCGC +
Preference number: 4 (lower is better)
Translates to: EANSLCSYVPLSPNIRSGPLMHL*RAQPSR
Trigger: GCGACTGGGTTGGGCGCGGCAGAGATGCATTAGGGG...CCCAGATCTGATGTTGGGACTAAGAGGGACATAGGAACACAGACTGTTGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460891.5
ENST00000608192.5
CDS-3UTR CCA 90 bp ATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACAGCTCCTTCTGGGGGTaGGAGACGACAGCCAAATAT +
Preference number: 4 (lower is better)
Translates to: ISERPPLLVDVCSSLHENSSFWG*ETTAKY
Trigger: ATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCT...GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGACCTTCTCCTTCAAGTaGAGGCTTGCCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWTFSFK*RLACGC
Trigger: GCAGCCACAGGCAAGCCTCCACTTGAAGGAGAAGGT...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp AGACAGGTGATTGCTGGCCCCACATTTAGGGCAAACAGAACAGCCAGCAGGAATAGTCACTCACCCAGCTaGACCTGCTGCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: RQVIAGPTFRANRTASRNSHSPS*TCCRTA
Trigger: GGCTGTGCGGCAGCAGGTCCAGCTGGGTGAGTGACT...ATTCCTGCTGGCTGTTCTGTTTGCCCTAAATGTGGGGCCAGCAATCACCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp TCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTCTTCATCACAGCAGTTaGGGTCTGCTCCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: SSCLLQYPLPGLMAVRRGLHHSS*GLLPHP
Trigger: TGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAG...ACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp GAGGCCAACAGTCTGTGTTCCTATGTCCCTCTTAGTCCCAACATCAGATCTGGGAGCGGCCCCCACTGCTaGTCGATGTCTGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: EANSLCSYVPLSPNIRSGSGPHC*SMSAPL
Trigger: GAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCT...CCCAGATCTGATGTTGGGACTAAGAGGGACATAGGAACACAGACTGTTGGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ACCACAGGAGCCACAGAATCGGGCAGACAGGTGATTGCTGGCCCCACATTTAGGGGCTGTGGGACAGAATaGGAGGGACGTATCCCTACA +
Preference number: 4 (lower is better)
Translates to: TTGATESGRQVIAGPTFRGCGTE*EGRIPT
Trigger: TGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCC...CCTAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATTCTGTGGCTCCTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGCCAAGACCTCTGGGTTaGCCGCCTTACTGTAGGCTA +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWPRPLG*PPYCRL
Trigger: TAGCCTACAGTAAGGCGGCCAACCCAGAGGTCTTGG...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR TCA 90 bp GGCGGAGGAGGGGCTTTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGCTGAGGGACACACACTaGACCAGCAGTCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: GGGGALSPLHIDSCDEGRLRDTH*TSSHFL
Trigger: GAGAAAATGACTGCTGGTTCAGTGTGTGTCCCTCAG...CCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCCCTCCTCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR TCA 90 bp ACCAGCCGCAGAAGGACGCCTCCCAGAGATTCCAGCGACCACATCTGTAGCAGGCGTAATGGTATGATCTaGGGGACACACACTGAACCA +
Preference number: 4 (lower is better)
Translates to: TSRRRTPPRDSSDHICSRRNGMI*GTHTEP
Trigger: TGGTTCAGTGTGTGTCCCTCAGATCATACCATTACG...CCTGCTACAGATGTGGTCGCTGGAATCTCTGGGAGGCGTCCTTCTGCGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR TCA 90 bp GGCGGAGGAGGGGCTTTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGGCACTCGTAATGGTATaGTCTGAGGGACACACACTG +
Preference number: 4 (lower is better)
Translates to: GGGGALSPLHIDSCDEGRALVMV*SEGHTL
Trigger: CAGTGTGTGTCCCTCAGATCATACCATTACGAGTGC...CCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCCCTCCTCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR TCA 90 bp AGCAGGATTTCCTGTACCACAGGCCCGGCAAATTACCTTCTCCACTATTCTCTCGCACACAAGCCCATCTaGGCTCCTTCTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SRISCTTGPANYLLHYSLAHKPI*APSGGG
Trigger: CCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGTGC...GAGAGAATAGTGGAGAAGGTAATTTGCCGGGCCTGTGGTACAGGAAATCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR TCA 90 bp ACCAGCCGCAGAAGGACGCCTCCCAGAGATTCCAGCGACCACATCTGTAGCAGGACACAGTATCTCAGGTaGGCAGGATTTCCTGTACCA +
Preference number: 4 (lower is better)
Translates to: TSRRRTPPRDSSDHICSRTQYLR*AGFPVP
Trigger: TGGTACAGGAAATCCTGCTCACCTGAGATACTGTGT...CCTGCTACAGATGTGGTCGCTGGAATCTCTGGGAGGCGTCCTTCTGCGGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGGCCCCGCCCACTGGGTaGTGGGCAGATGATTGGTGG +
Preference number: 4 (lower is better)
Translates to: ENWNRFMVLIHNSHGYDGAPPTG*WADDWW
Trigger: CCACCAATCATCTGCCCAGCACCCAGTGGGCGGGGC...CCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR GCA 90 bp GTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTCCTTCCTGACCGCTTACGTGTaGAAAACCGGGGGACTGGGA +
Preference number: 4 (lower is better)
Translates to: VGVCSLIQQLFNHRDSSFLTAYV*KTGGLG
Trigger: TCCCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAG...GAAGGAAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR GCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGTCCCATCCTGGGTTCTaGAATCAAGGCCCGGAATTC +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWSHPGF*NQGPEF
Trigger: GAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGA...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp CGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTAAGGAACCAGGCTTGTaGGTCCGATGGGCATTGACA +
Preference number: 4 (lower is better)
Translates to: RVDCLHHSSWGLLPHPAAKEPGL*VRWALT
Trigger: TGTCAATGCCCATCGGACGCACAAGCCTGGTTCCTT...AGCTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR CCA 90 bp CAAGCCCATCTGAGCTCCTTCTGGGGGTGGGAGACGACAGCCAAATATGGGTGGACAGCCAAATATGGGTaGGACAGGAGAGCCACATTC +
Preference number: 4 (lower is better)
Translates to: QAHLSSFWGWETTAKYGWTAKYG*DRRATF
Trigger: GAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGT...CCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCTCAGATGGGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR CCA 90 bp GGCTCAGAAAAAGGGCGAGGTTCCTCAGCAGCTAGAGCCAGGCTTCTGTCCAAGAGCTCCTTCTGGGGGTaGGAGACGACAGCCAAATAT +
Preference number: 4 (lower is better)
Translates to: GSEKGRGSSAARARLLSKSSFWG*ETTAKY
Trigger: ATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCT...CTTGGACAGAAGCCTGGCTCTAGCTGCTGAGGAACCTCGCCCTTTTTCTGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000460891.5
CDS-3UTR CCA 90 bp GCCACGGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCAGCTCCTTCTGGGGGTaGGAGACGACAGCCAAATAT +
Preference number: 4 (lower is better)
Translates to: ATVMTGRLSSSQQLGSAPSSFWG*ETTAKY
Trigger: ATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCT...GGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACCGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp CTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGACCTTCTCCTTCAAGTaGAGGCTTGCCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLVDVCSSLHENWNRFMVTFSFK*RLACGC
Trigger: GCAGCCACAGGCAAGCCTCCACTTGAAGGAGAAGGT...CACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp CCTTGGCCAAACTTGGCAGCAAAGAGTGAGGTGACAAGGTCATCTCCAGTGTTCCAGGAATGCCGAGCATaGCTCCACACCAGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: PWPNLAAKSEVTRSSPVFQECRA*LHTSRR
Trigger: TCTGCGGCTGGTGTGGAGCCATGCTCGGCATTCCTG...GAACACTGGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAGTTTGGCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp ACCAGCCGCAGAAGGACGCCTCCCAGAGATTCCAGCGACCACATCTGTAGCAGGGTCAGGAGGGGTTTATaGTCACTCATTTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TSRRRTPPRDSSDHICSRVRRGL*SLIFSC
Trigger: GCAGGAGAAAATGAGTGACCATAAACCCCTCCTGAC...CCTGCTACAGATGTGGTCGCTGGAATCTCTGGGAGGCGTCCTTCTGCGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR CCA 90 bp CAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTCTCTTCCTTCCCCCGTaGGTCCGACTTCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: QQLGSAPSSSSCSITETLLFLPP*VRLPSA
Trigger: TGCTGAAGGAAGTCGGACCCACGGGGGAAGGAAGAG...AAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAACTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGCTTCATCACAGCAGTTaGGGTCTGCTCCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWLHHSS*GLLPHP
Trigger: TGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAG...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GAGGCTCCTAGTTTGAGCGAGTTGGTCCTCAAGCCCTTGGCCAAACTTGGCAGCCTTCATCACAGCAGTTaGGGTCTGCTCCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: EAPSLSELVLKPLAKLGSLHHSS*GLLPHP
Trigger: TGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAG...GCTGCCAAGTTTGGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGGAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp CTTTCCCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGCGCGATGGCGCGATCTTaGCTCACTGTAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LSHPGFCNQGPEFRVVLSAMARS*LTVTSA
Trigger: GGCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGC...GCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GGCGGAGGAGGGGCTTTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGCGTAATGGTATGATCTaGGGGACACACACTGAACCA +
Preference number: 4 (lower is better)
Translates to: GGGGALSPLHIDSCDEGRRNGMI*GTHTEP
Trigger: TGGTTCAGTGTGTGTCCCTCAGATCATACCATTACG...CCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCCCTCCTCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR TCA 90 bp ATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACCGTAATGGTATGATCTaGGGGACACACACTGAACCA +
Preference number: 4 (lower is better)
Translates to: ISERPPLLVDVCSSLHENRNGMI*GTHTEP
Trigger: TGGTTCAGTGTGTGTCCCTCAGATCATACCATTACG...GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp GAGGCTCCTAGTTTGAGCGAGTTGGTCCTCAAGCCCTTGGCCAAACTTGGCAGCGCACTCGTAATGGTATaGTCTGAGGGACACACACTG +
Preference number: 4 (lower is better)
Translates to: EAPSLSELVLKPLAKLGSALVMV*SEGHTL
Trigger: CAGTGTGTGTCCCTCAGATCATACCATTACGAGTGC...GCTGCCAAGTTTGGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGGAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp ATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTTAGCTTTTCCAGGCTaGGGCACTCGTAATGGTATG +
Preference number: 4 (lower is better)
Translates to: ISERPPLLVDVCSSLHENLAFPG*GTRNGM
Trigger: CATACCATTACGAGTGCCTCAGCCTGGAAAAGCTAA...GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp GCATTCTTCTTTTGGATGCTTGCATTGCATCCCAGTAAAGTGGCGGTGCTCTCTGCACACAAGCCCATCTaGGCTCCTTCTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AFFFWMLALHPSKVAVLSAHKPI*APSGGG
Trigger: CCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGTGC...AGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp ATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACACACAGTATCTCAGGTaGGCAGGATTTCCTGTACCA +
Preference number: 4 (lower is better)
Translates to: ISERPPLLVDVCSSLHENTQYLR*AGFPVP
Trigger: TGGTACAGGAAATCCTGCTCACCTGAGATACTGTGT...GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGCAGCAAAGAGTGAGGTaGCAAGGTCATCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWQQRVR*QGHLQC
Trigger: ACACTGGAGATGACCTTGTCACCTCACTCTTTGCTG...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp CAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTCTGAGGCTCCTAGTTTaGGCGAGTTGGTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: QQLGSAPSSSSCSITETLLRLLV*ASWSSS
Trigger: GCTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAG...AAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAACTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp GACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGGCACGTATTCTTAAATaGAGTCCCGTGGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: DGSIVFITAVGVCSLIQQARILK*SPVEAS
Trigger: TGAGGCCTCCACGGGACTTCATTTAAGAATACGTGC...CTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp CCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGCATAACAGGCGGAGGTTGCAGTaGGCTGAGATTGCGCTACTG +
Preference number: 4 (lower is better)
Translates to: PSWVLQSRPGIQGCSEHNRRRLQ*AEIALL
Trigger: CAGTAGCGCAATCTCAGCTCACTGCAACCTCCGCCT...GTTATGCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR TCA 90 bp AGCAGGATTTCCTGTACCACAGGCCCGGCAAATTACCTTCTCCACTATTCTCTCGGTGGGCGCATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: SRISCTTGPANYLLHYSLGGRIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATGCGCCCACC...GAGAGAATAGTGGAGAAGGTAATTTGCCGGGCCTGTGGTACAGGAAATCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR TCA 90 bp CGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTTTTCCCAACTCAGAATaGAGGAACCAGGCTTGTGCG +
Preference number: 4 (lower is better)
Translates to: RVDCLHHSSWGLLPHPAAFPNSE*RNQACA
Trigger: CGCACAAGCCTGGTTCCTTCATTCTGAGTTGGGAAA...AGCTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR TCA 90 bp CCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGGAATTAGGGTGTCATaGTGGGAAGGTCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PLLVDVCSSLHENWNRFMGIRVS*WEGLRL
Trigger: CAGCCTGAGACCTTCCCATCATGACACCCTAATTCC...CATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR GCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGCAAGCTTCTGCATTCTaGACACAAGCCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWQASAF*TQAHLS
Trigger: GCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTG...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp TTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGGCCCCCTCACAGGTGCAAGCTTCTGCATTCTaGACACAAGCCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: LSPLHIDSCDEGRAPSQVQASAF*TQAHLS
Trigger: GCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTG...CACCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR GCA 90 bp CCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGGTACCAAGCTTCTaGATTCTGCACACAAGCCCA +
Preference number: 4 (lower is better)
Translates to: PHCWSMSAPLCTRTGIASWVPSF*ILHTSP
Trigger: TGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCA...TGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp ACCACAGGAGCCACAGAATCGGGCAGACAGGTGATTGCTGGCCCCACATTTAGGGGGCTTTATCCCCACTaGACATCGACTCTTGTGATG +
Preference number: 4 (lower is better)
Translates to: TTGATESGRQVIAGPTFRGLYPH*TSTLVM
Trigger: CATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCC...CCTAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATTCTGTGGCTCCTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GTATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGATTTTTGCTAGCAGCTTaGCAGATGGGTAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VFLSGPHCWSMSAPLCTRFLLAA*QMGRRG
Trigger: GCCTCTTCTACCCATCTGGCAAGCTGCTAGCAAAAA...TCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp AAGGCCAAGCAGAGTTGCTTCATGAAGAGCTGTATTTCTGAGCGGCCCCCACTGCTGCTGGTCGATGTCTaGTCCTCTCTGCACGAGAAC +
Preference number: 4 (lower is better)
Translates to: KAKQSCFMKSCISERPPLLLVDV*SSLHEN
Trigger: GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG...CAGTGGGGGCCGCTCAGAAATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTCTGAGCGGCCCCCACTaGTGGTCGATGTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLLSGPH*WSMSAP
Trigger: AGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAG...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GCATTCTTCTTTTGGATGCTTGCATTGCATCCCAGTAAAGTGGCGGTGCTCTCTCTGAGCGGCCCCCACTaGTGGTCGATGTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AFFFWMLALHPSKVAVLSLSGPH*WSMSAP
Trigger: AGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAG...AGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp ATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGCTGTCTGGCCTCCTaGATTCTTCTTTTGGATGCT +
Preference number: 4 (lower is better)
Translates to: ISERPPLLVDVCSSLHENCCLAS*ILLLDA
Trigger: AGCATCCAAAAGAAGAATGCAGGAGGCCAGACAGCA...GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp AACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGCAGCAAAACGCCTCTTaGCTCCTCCTTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: NWNRFMVLIHNSHGYDGSQQNAS*LLLRRR
Trigger: GCGGCGGCGAAGGAGGAGGCAAGAGGCGTTTTGCTG...CGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR CCA 90 bp ATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAGCTCCGCAGGGAGCCTaGTACCCGCCTGGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: MSAPLCTRTGIASWCLFIAPQGA*YPPGVP
Trigger: AGGAACTCCAGGCGGGTACCAGGCTCCCTGCGGAGC...TATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR CCA 90 bp TCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTTCCTCCACCATAAGCTaGGATTTCCAATGGACTCTC +
Preference number: 4 (lower is better)
Translates to: SSCLLQYPLPGLMAVRRGSSTIS*DFQWTL
Trigger: GAGAGTCCATTGGAAATCCCAGCTTATGGTGGAGGA...ACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR CCA 90 bp TGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTCCGGGGGACTGGGACTaGCGGGTGGGTGGTCTAGAA +
Preference number: 4 (lower is better)
Translates to: WNRFMVLIHNSHGYDGSIPGDWD*RVGGLE
Trigger: TTCTAGACCACCCACCCGCCAGTCCCAGTCCCCCGG...AATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR CCA 90 bp GAGGCTCCTAGTTTGAGCGAGTTGGTCCTCAAGCCCTTGGCCAAACTTGGCAGCACAGCCAAATATGGGTaGGACAGGAGAGCCACATTC +
Preference number: 4 (lower is better)
Translates to: EAPSLSELVLKPLAKLGSTAKYG*DRRATF
Trigger: GAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGT...GCTGCCAAGTTTGGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGGAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGCACACACCACACAGATaGGAGTGTTCATGGGTACCA +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWHTPHR*ECSWVP
Trigger: TGGTACCCATGAACACTCCCATCTGTGTGGTGTGTG...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp CTTTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGGCCCCCTCACAGGCACACACCACACAGATaGGAGTGTTCATGGGTACCA +
Preference number: 4 (lower is better)
Translates to: LYPHCTSTLVMKAGPPHRHTPHR*ECSWVP
Trigger: TGGTACCCATGAACACTCCCATCTGTGTGGTGTGTG...CCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTAGTCACTCACCCAGCTaGACCTGCTGCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLSHSPS*TCCRTA
Trigger: GGCTGTGCGGCAGCAGGTCCAGCTGGGTGAGTGACT...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GCATTCTTCTTTTGGATGCTTGCATTGCATCCCAGTAAAGTGGCGGTGCTCTCTAGTCACTCACCCAGCTaGACCTGCTGCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: AFFFWMLALHPSKVAVLSSHSPS*TCCRTA
Trigger: GGCTGTGCGGCAGCAGGTCCAGCTGGGTGAGTGACT...AGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGAGCGGCCCCCACTGCTaGTCGATGTCTGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: ENWNRFMVLIHNSHGYDGSGPHC*SMSAPL
Trigger: GAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCT...CCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GGCTCAGAAAAAGGGCGAGGTTCCTCAGCAGCTAGAGCCAGGCTTCTGTCCAAGAGCCTCTCGAGTAACTaGGATTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: GSEKGRGSSAARARLLSKSLSSN*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGTTACTCGAGAGGCT...CTTGGACAGAAGCCTGGCTCTAGCTGCTGAGGAACCTCGCCCTTTTTCTGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377630.9
CDS-3UTR CCA 90 bp GAGGCTCCTAGTTTGAGCGAGTTGGTCCTCAAGCCCTTGGCCAAACTTGGCAGCAGCCTCTCGAGTAACTaGGATTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: EAPSLSELVLKPLAKLGSSLSSN*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGTTACTCGAGAGGCT...GCTGCCAAGTTTGGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGGAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGTCTGGACTTTCTCCATaGACTTGGTCCCTCACACCT +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWSGLSP*TWSLTP
Trigger: AGGTGTGAGGGACCAAGTCCATGGAGAAAGTCCAGA...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CCA 90 bp GGAAAGGAGCCAGGCAAGATGCAGTTTCAGGCAAAGTCCATGGAGGGTTCCTTCCCACCTTTCCCATCCTaGGTTCTGCAATCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: GKEPGKMQFQAKSMEGSFPPFPS*VLQSRP
Trigger: GGGCCTTGATTGCAGAACCCAGGATGGGAAAGGTGG...GAAGGAACCCTCCATGGACTTTGCCTGAAACTGCATCTTGCCTGGCTCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR CAA 72 bp TCAGGGCTAACAGTCATCCAGGCTGAGGCTCCTAGTTaGAGCGAGTTGGTCCTCAAGCCCTTGGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: SGLTVIQAEAPS*SELVLKPLAKL
Trigger: AAGTTTGGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAGCCTGGATGACTGTTAGCCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp CAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTGGCAGTGGGCACACTTaGGAAAGTCTGTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: QQLGSAPSSSSCSITETLGSGHT*ESLSPF
Trigger: AAAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCC...AAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAACTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp AGCAGAGCAGGAAAGGGAAAGGAGCCAGGCAAGATGCAGTTTCAGGCAAAGTCCGGCAGTGGGCACACTTaGGAAAGTCTGTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SRAGKGKEPGKMQFQAKSGSGHT*ESLSPF
Trigger: AAAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCC...GGACTTTGCCTGAAACTGCATCTTGCCTGGCTCCTTTCCCTTTCCTGCTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR TCA 90 bp CAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTGGAGAGCCACATTCTTaGCAGAAGCGAGCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: QQLGSAPSSSSCSITETLGEPHS*QKRAKG
Trigger: TCCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCC...AAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAACTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp GGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCGGAGAGCCACATTCTTaGCAGAAGCGAGCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GYDGSIVFITAVGVCSLIGEPHS*QKRAKG
Trigger: TCCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCC...GATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGACACAGTATCTCAGGTaGGCAGGATTTCCTGTACCA +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWTQYLR*AGFPVP
Trigger: TGGTACAGGAAATCCTGCTCACCTGAGATACTGTGT...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp ACCACAGGAGCCACAGAATCGGGCAGACAGGTGATTGCTGGCCCCACATTTAGGTCTGAGCATAACACCTaGGGTGAGCAGAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: TTGATESGRQVIAGPTFRSEHNT*GEQRCD
Trigger: ATCACATCTCTGCTCACCTCAGGTGTTATGCTCAGA...CCTAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATTCTGTGGCTCCTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR TCA 90 bp AAGTGGCGGTGCTCTCTCTTCCTGCAAGGCCAAGCAGAGTTGCTTCATGAAGAGGCACTGCTCAGAAGGTaGTCGCTGAAATTCACTGCC +
Preference number: 4 (lower is better)
Translates to: KWRCSLFLQGQAELLHEEALLRR*SLKFTA
Trigger: GGCAGTGAATTTCAGCGATCACCTTCTGAGCAGTGC...CTCTTCATGAAGCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp GTATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAAGCAGAGTTGCTTCATaGAGAGCTGTATTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: VFLSGPHCWSMSAPLCTRSRVAS*RAVFLS
Trigger: GCTCAGAAATACAGCTCTTCATGAAGCAACTCTGCT...TCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp CCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGCAGCAAAGAGTGAGGTaGCAAGGTCATCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PLLVDVCSSLHENWNRFMQQRVR*QGHLQC
Trigger: ACACTGGAGATGACCTTGTCACCTCACTCTTTGCTG...CATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp TCCTGTACCACAGGCCCGGCAAATTACCTTCTCCTTCAAGTGGAGGCTTGCCTGGCACGTATTCTTAAATaGAGTCCCGTGGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SCTTGPANYLLLQVEACLARILK*SPVEAS
Trigger: TGAGGCCTCCACGGGACTTCATTTAAGAATACGTGC...CAGGCAAGCCTCCACTTGAAGGAGAAGGTAATTTGCCGGGCCTGTGGTACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp TGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTTTATGGGCACTCCAGCCTGTGTaGCAGAACAAGATTCTGTCT +
Preference number: 4 (lower is better)
Translates to: CLLQYPLPGLMAVRRGLWALQPV*QNKILS
Trigger: AGACAGAATCTTGTTCTGTCACACAGGCTGGAGTGC...CCATAAACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR GCA 90 bp GGCGGAGGAGGGGCTTTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGACACCTTTGTCACAATaGCACTCTGTCTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: GGGGALSPLHIDSCDEGRTPLSQ*HSVCSL
Trigger: AAGACTGCAGACAGAGTGGCATTGTGACAAAGGTGT...CCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCCCTCCTCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR GCA 90 bp CTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGGGGCTTTATCCCCACTaGACATCGACTCTTGTGATG +
Preference number: 4 (lower is better)
Translates to: LLVDVCSSLHENWNRFMVGLYPH*TSTLVM
Trigger: CATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCC...CACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGTTTTTGCTAGCAGCTTaGCAGATGGGTAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: DGSIVFITAVGVCSLIQQFLLAA*QMGRRG
Trigger: GCCTCTTCTACCCATCTGGCAAGCTGCTAGCAAAAA...CTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGTGCTGTCTGGCCTCCTaGATTCTTCTTTTGGATGCT +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWCCLAS*ILLLDA
Trigger: AGCATCCAAAAGAAGAATGCAGGAGGCCAGACAGCA...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GCCACGGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTGCTGTCTGGCCTCCTaGATTCTTCTTTTGGATGCT +
Preference number: 4 (lower is better)
Translates to: ATVMTGRLSSSQQLGSAPCCLAS*ILLLDA
Trigger: AGCATCCAAAAGAAGAATGCAGGAGGCCAGACAGCA...GGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACCGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTCCTTCAGGCGTAAGCCACTGTaGCAGCCATGCACGTATTCT +
Preference number: 4 (lower is better)
Translates to: VGVCSLIQQLFNHRDSSFRRKPL*QPCTYS
Trigger: AGAATACGTGCATGGCTGGCACAGTGGCTTACGCCT...GAAGGAAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp AGACAGGTGATTGCTGGCCCCACATTTAGGGCAAACAGAACAGCCAGCAGGAATGGAATATTCAGGGACTaGCAGGCACATCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RQVIAGPTFRANRTASRNGIFRD*QAHRGS
Trigger: TGAGCCCCGATGTGCCTGGCAGTCCCTGAATATTCC...ATTCCTGCTGGCTGTTCTGTTTGCCCTAAATGTGGGGCCAGCAATCACCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000460891.5
CDS-3UTR CCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGTCCTCCACCATAAGCTaGGATTTCCAATGGACTCTC +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWSSTIS*DFQWTL
Trigger: GAGAGTCCATTGGAAATCCCAGCTTATGGTGGAGGA...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000608192.5
CDS-3UTR CCA 90 bp CCTTGGCCAAACTTGGCAGCAAAGAGTGAGGTGACAAGGTCATCTCCAGTGTTCGACGACAGCCAAATATaGGTGGGACAGGAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PWPNLAAKSEVTRSSPVFDDSQI*VGQESH
Trigger: GTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTC...GAACACTGGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAGTTTGGCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCAGCTCCTTCTGGGGGTaGGAGACGACAGCCAAATAT +
Preference number: 4 (lower is better)
Translates to: GYDGSIVFITAVGVCSLISSFWG*ETTAKY
Trigger: ATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCT...GATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp TCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACCAGGAATGCCGAGCATaGCTCCACACCAGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: SSLHENWNRFMVLIHNSHQECRA*LHTSRR
Trigger: TCTGCGGCTGGTGTGGAGCCATGCTCGGCATTCCTG...GTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGGTCAGGAGGGGTTTATaGTCACTCATTTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWVRRGL*SLIFSC
Trigger: GCAGGAGAAAATGAGTGACCATAAACCCCTCCTGAC...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp GAGGCTCCTAGTTTGAGCGAGTTGGTCCTCAAGCCCTTGGCCAAACTTGGCAGCGTCAGGAGGGGTTTATaGTCACTCATTTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EAPSLSELVLKPLAKLGSVRRGL*SLIFSC
Trigger: GCAGGAGAAAATGAGTGACCATAAACCCCTCCTGAC...GCTGCCAAGTTTGGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp CTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATAGTCACTCACCCAGCTaGACCTGCTGCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: LHENWNRFMVLIHNSHGYSHSPS*TCCRTA
Trigger: GGCTGTGCGGCAGCAGGTCCAGCTGGGTGAGTGACT...ATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp TTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGGCCCCCTCACAGGTGTCTCTGCACGAGAACTaGAATCGCTTCATGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LSPLHIDSCDEGRAPSQVSLHEN*NRFMVL
Trigger: AAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGA...CACCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp GAGGCTCCTAGTTTGAGCGAGTTGGTCCTCAAGCCCTTGGCCAAACTTGGCAGCTCTCTGCACGAGAACTaGAATCGCTTCATGGTGCTT +
Preference number: 4 (lower is better)
Translates to: EAPSLSELVLKPLAKLGSSLHEN*NRFMVL
Trigger: AAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGA...GCTGCCAAGTTTGGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGGAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCTGCATCCCAGTAAAGTaGCGGTGCTCTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GYDGSIVFITAVGVCSLICIPVK*RCSLFL
Trigger: CAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCA...GATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp ATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACCCTGCATTCTTCTTTTaGATGCTTGCATTGCATCCC +
Preference number: 4 (lower is better)
Translates to: ISERPPLLVDVCSSLHENPAFFF*MLALHP
Trigger: GGGATGCAATGCAAGCATCCAAAAGAAGAATGCAGG...GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGAGGTCGTATGCTGTCTaGCCTCCTGCATTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWRSYAV*PPAFFF
Trigger: AAAGAAGAATGCAGGAGGCCAGACAGCATACGACCT...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp CCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGCATAACGGCTGTGGGACAGAATaGGAGGGACGTATCCCTACA +
Preference number: 4 (lower is better)
Translates to: PSWVLQSRPGIQGCSEHNGCGTE*EGRIPT
Trigger: TGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCC...GTTATGCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp GCCACGGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCGCCAAGTGTGAATCCTaGGTCTGCCACTTACTAACT +
Preference number: 4 (lower is better)
Translates to: ATVMTGRLSSSQQLGSAPAKCES*VCHLLT
Trigger: AGTTAGTAAGTGGCAGACCCAGGATTCACACTTGGC...GGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACCGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR CCA 90 bp ATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAGGACTGTGTCTTGCCTaGGACTGGCGGGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: MSAPLCTRTGIASWCLFIGLCLA*DWRVGG
Trigger: ACCACCCACCCGCCAGTCCCAGGCAAGACACAGTCC...TATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR TCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGCTTGTCAAACACTTCTaGCCGCTTACGTGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWLVKHF*PLTCAK
Trigger: TTTTGCACACGTAAGCGGTCAGAAGTGTTTGACAAG...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp CTTTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGGCCCCCTCACAGGCTTGTCAAACACTTCTaGCCGCTTACGTGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: LYPHCTSTLVMKAGPPHRLVKHF*PLTCAK
Trigger: TTTTGCACACGTAAGCGGTCAGAAGTGTTTGACAAG...CCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR TCA 90 bp TCCTGTACCACAGGCCCGGCAAATTACCTTCTCCTTCAAGTGGAGGCTTGCCTGACACAGTATCTCAGGTaGGCAGGATTTCCTGTACCA +
Preference number: 4 (lower is better)
Translates to: SCTTGPANYLLLQVEACLTQYLR*AGFPVP
Trigger: TGGTACAGGAAATCCTGCTCACCTGAGATACTGTGT...CAGGCAAGCCTCCACTTGAAGGAGAAGGTAATTTGCCGGGCCTGTGGTACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp ATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAGGGCCCCCTCACAGGTaGCACAGTATCTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: MSAPLCTRTGIASWCLFIGPPHR*HSISGE
Trigger: CTCACCTGAGATACTGTGTCACCTGTGAGGGGGCCC...TATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp AGACAGGTGATTGCTGGCCCCACATTTAGGGCAAACAGAACAGCCAGCAGGAATAATCGGGCAGACAGGTaGTTGCTGGCCCCACATTTA +
Preference number: 4 (lower is better)
Translates to: RQVIAGPTFRANRTASRNNRADR*LLAPHL
Trigger: TAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATT...ATTCCTGCTGGCTGTTCTGTTTGCCCTAAATGTGGGGCCAGCAATCACCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR TCA 90 bp CTCACAGGTGACACAGTATCTCAGGTGAGCAGGATTTCCTGTACCACAGGCCCGTCTGAGCATAACACCTaGGGTGAGCAGAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: LTGDTVSQVSRISCTTGPSEHNT*GEQRCD
Trigger: ATCACATCTCTGCTCACCTCAGGTGTTATGCTCAGA...CGGGCCTGTGGTACAGGAAATCCTGCTCACCTGAGATACTGTGTCACCTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR TCA 90 bp GGCTCAGAAAAAGGGCGAGGTTCCTCAGCAGCTAGAGCCAGGCTTCTGTCCAAGTCAGAAGGTGATCGCTaGAATTCACTGCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GSEKGRGSSAARARLLSKSEGDR*NSLPCS
Trigger: TGAACAAGGCAGTGAATTTCAGCGATCACCTTCTGA...CTTGGACAGAAGCCTGGCTCTAGCTGCTGAGGAACCTCGCCCTTTTTCTGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377630.9
CDS-3UTR TCA 90 bp CGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTTCAGAAGGTGATCGCTaGAATTCACTGCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: RVDCLHHSSWGLLPHPAASEGDR*NSLPCS
Trigger: TGAACAAGGCAGTGAATTTCAGCGATCACCTTCTGA...AGCTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp CCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGCATAACGCACTGCTCAGAAGGTaGTCGCTGAAATTCACTGCC +
Preference number: 4 (lower is better)
Translates to: PSWVLQSRPGIQGCSEHNALLRR*SLKFTA
Trigger: GGCAGTGAATTTCAGCGATCACCTTCTGAGCAGTGC...GTTATGCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp AGACAGGTGATTGCTGGCCCCACATTTAGGGCAAACAGAACAGCCAGCAGGAATGCACTGCTCAGAAGGTaGTCGCTGAAATTCACTGCC +
Preference number: 4 (lower is better)
Translates to: RQVIAGPTFRANRTASRNALLRR*SLKFTA
Trigger: GGCAGTGAATTTCAGCGATCACCTTCTGAGCAGTGC...ATTCCTGCTGGCTGTTCTGTTTGCCCTAAATGTGGGGCCAGCAATCACCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGAGCAGAGTTGCTTCATaGAGAGCTGTATTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWSRVAS*RAVFLS
Trigger: GCTCAGAAATACAGCTCTTCATGAAGCAACTCTGCT...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp ACCACAGGAGCCACAGAATCGGGCAGACAGGTGATTGCTGGCCCCACATTTAGGAGCCTTGTACACTTGTaGACTCTTCATGCTAAAGGG +
Preference number: 4 (lower is better)
Translates to: TTGATESGRQVIAGPTFRSLVHL*TLHAKG
Trigger: CCCTTTAGCATGAAGAGTTCACAAGTGTACAAGGCT...CCTAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATTCTGTGGCTCCTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR GCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGACACCTTTGTCACAATaGCACTCTGTCTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWTPLSQ*HSVCSL
Trigger: AAGACTGCAGACAGAGTGGCATTGTGACAAAGGTGT...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp CCTTGGCCAAACTTGGCAGCAAAGAGTGAGGTGACAAGGTCATCTCCAGTGTTCAGGCGTAAGCCACTGTaGCAGCCATGCACGTATTCT +
Preference number: 4 (lower is better)
Translates to: PWPNLAAKSEVTRSSPVFRRKPL*QPCTYS
Trigger: AGAATACGTGCATGGCTGGCACAGTGGCTTACGCCT...GAACACTGGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAGTTTGGCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp CTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATTTGCCCAGGCTGGAGTaGGATGGCGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LHENWNRFMVLIHNSHGYLPRLE*DGAILA
Trigger: AGCCAAGATCGCGCCATCGCACTCCAGCCTGGGCAA...ATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp AGCAGGATTTCCTGTACCACAGGCCCGGCAAATTACCTTCTCCACTATTCTCTCGACGACAGCCAAATATaGGTGGGACAGGAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SRISCTTGPANYLLHYSLDDSQI*VGQESH
Trigger: GTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTC...GAGAGAATAGTGGAGAAGGTAATTTGCCGGGCCTGTGGTACAGGAAATCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR CCA 90 bp AAGTGGCGGTGCTCTCTCTTCCTGCAAGGCCAAGCAGAGTTGCTTCATGAAGAGCACACACCACACAGATaGGAGTGTTCATGGGTACCA +
Preference number: 4 (lower is better)
Translates to: KWRCSLFLQGQAELLHEEHTPHR*ECSWVP
Trigger: TGGTACCCATGAACACTCCCATCTGTGTGGTGTGTG...CTCTTCATGAAGCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCACACACCACACAGATaGGAGTGTTCATGGGTACCA +
Preference number: 4 (lower is better)
Translates to: GYDGSIVFITAVGVCSLIHTPHR*ECSWVP
Trigger: TGGTACCCATGAACACTCCCATCTGTGTGGTGTGTG...GATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp TGTATATTAGCTTATCAATTGTTACCCCATCCTGGCGGGCATGGTGGCTTATGCCAGGAATGCCGAGCATaGCTCCACACCAGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: CILAYQLLPHPGGHGGLCQECRA*LHTSRR
Trigger: TCTGCGGCTGGTGTGGAGCCATGCTCGGCATTCCTG...GCATAAGCCACCATGCCCGCCAGGATGGGGTAACAATTGATAAGCTAATATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR CCA 90 bp CGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTTCCCAACATCAGATCTaGGCAAAGGAATATTCAGGG +
Preference number: 4 (lower is better)
Translates to: RVDCLHHSSWGLLPHPAASQHQI*AKEYSG
Trigger: CCCTGAATATTCCTTTGCCCAGATCTGATGTTGGGA...AGCTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp CGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTTCACAACCATCTTCGTaGACAGTAGCAGAGATAAGC +
Preference number: 4 (lower is better)
Translates to: RVDCLHHSSWGLLPHPAASQPSS*TVAEIS
Trigger: GCTTATCTCTGCTACTGTCCACGAAGATGGTTGTGA...AGCTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTCTCTTCCTTCCCCCGTaGGTCCGACTTCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLLFLPP*VRLPSA
Trigger: TGCTGAAGGAAGTCGGACCCACGGGGGAAGGAAGAG...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GTGAGCAGGATTTCCTGTACCACAGGCCCGGCAAATTACCTTCTCCTTCAAGTGTGCATCCCAGTAAAGTaGCGGTGCTCTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VSRISCTTGPANYLLLQVCIPVK*RCSLFL
Trigger: CAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCA...CACTTGAAGGAGAAGGTAATTTGCCGGGCCTGTGGTACAGGAAATCCTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGCCTGCATTCTTCTTTTaGATGCTTGCATTGCATCCC +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWPAFFF*MLALHP
Trigger: GGGATGCAATGCAAGCATCCAAAAGAAGAATGCAGG...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp CCTTGGCCAAACTTGGCAGCAAAGAGTGAGGTGACAAGGTCATCTCCAGTGTTCCTGAGGGACACACACTaGACCAGCAGTCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: PWPNLAAKSEVTRSSPVFLRDTH*TSSHFL
Trigger: GAGAAAATGACTGCTGGTTCAGTGTGTGTCCCTCAG...GAACACTGGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAGTTTGGCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp GCATTCTTCTTTTGGATGCTTGCATTGCATCCCAGTAAAGTGGCGGTGCTCTCTGGGTGGTCTAGAACCTaGTCCTCCACCATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: AFFFWMLALHPSKVAVLSGWSRT*SSTISW
Trigger: CCAGCTTATGGTGGAGGATCAGGTTCTAGACCACCC...AGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp CCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGCTTGTCAAACACTTCTaGCCGCTTACGTGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: PLLVDVCSSLHENWNRFMLVKHF*PLTCAK
Trigger: TTTTGCACACGTAAGCGGTCAGAAGTGTTTGACAAG...CATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp GTATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGATTTTTCAATAGTATCTaGGGTACTCTGGCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: VFLSGPHCWSMSAPLCTRFFNSI*GTLAVV
Trigger: GACTACAGCCAGAGTACCTCAGATACTATTGAAAAA...TCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp TCCTGTACCACAGGCCCGGCAAATTACCTTCTCCTTCAAGTGGAGGCTTGCCTGAGCAGAGTTGCTTCATaGAGAGCTGTATTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SCTTGPANYLLLQVEACLSRVAS*RAVFLS
Trigger: GCTCAGAAATACAGCTCTTCATGAAGCAACTCTGCT...CAGGCAAGCCTCCACTTGAAGGAGAAGGTAATTTGCCGGGCCTGTGGTACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp CTTGCATTGCATCCCAGTAAAGTGGCGGTGCTCTCTCTTCCTGCAAGGCCAAGCAGCAGAGTTGCTTCATaGAGAGCTGTATTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LALHPSKVAVLSLPARPSSRVAS*RAVFLS
Trigger: GCTCAGAAATACAGCTCTTCATGAAGCAACTCTGCT...GCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCAATGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp CCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGCATAACCAGCAAAGAGTGAGGTaGCAAGGTCATCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PSWVLQSRPGIQGCSEHNQQRVR*QGHLQC
Trigger: ACACTGGAGATGACCTTGTCACCTCACTCTTTGCTG...GTTATGCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTCTGAGGCTCCTAGTTTaGGCGAGTTGGTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLLRLLV*ASWSSS
Trigger: GCTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAG...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTCTCACACCCAGTGCCTaGAGCGTCACACATCCTTCT +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLLTPSA*SVTHPS
Trigger: AGAAGGATGTGTGACGCTTCAGGCACTGGGTGTGAG...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR TCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGTCTGGCCTAACTCCTTaGATCTTTCTTATCGATGCT +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWSGLTP*IFLIDA
Trigger: AGCATCGATAAGAAAGATTCAAGGAGTTAGGCCAGA...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR TCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTCCAACAACATCCCTGTaGCCAAGACCTCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLPTTSL*PRPLGW
Trigger: CCAACCCAGAGGTCTTGGTCACAGGGATGTTGTTGG...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR TCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTGCCTTGATCACACTTaGGTCCCACCCATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLCLDHT*VPPMPA
Trigger: TGCAGGCATGGGTGGGACTCAAGTGTGATCAAGGCA...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGCTCTCTCTCGCCTCTTaGCTCCTCCTTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMLSLAS*LLLRRR
Trigger: GCGGCGGCGAAGGAGGAGGCAAGAGGCGAGAGAGAG...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262547.9
ENST00000377630.9
CDS-3UTR GCA 90 bp TCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTTTCTCATTATCTCCGTaGTTGTCAAACACTTCTGAC +
Preference number: 4 (lower is better)
Translates to: SSCLLQYPLPGLMAVRRGFSLSP*LSNTSD
Trigger: GTCAGAAGTGTTTGACAAGCACGGAGATAATGAGAA...ACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GCAGAGCAGGAAAGGGAAAGGAGCCAGGCAAGATGCAGTTTCAGGCAAAGTCCATTTTTGCTAGCAGCTTaGCAGATGGGTAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: AEQERERSQARCSFRQSPFLLAA*QMGRRG
Trigger: GCCTCTTCTACCCATCTGGCAAGCTGCTAGCAAAAA...TGGACTTTGCCTGAAACTGCATCTTGCCTGGCTCCTTTCCCTTTCCTGCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR GCA 90 bp TGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTTTATGGGGAATCGCTTCATGGTaGTTATTCATAACAGCCACG +
Preference number: 4 (lower is better)
Translates to: CLLQYPLPGLMAVRRGLWGIASW*LFITAT
Trigger: CGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC...CCATAAACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp CCTTGGCCAAACTTGGCAGCAAAGAGTGAGGTGACAAGGTCATCTCCAGTGTTCATGTCTGCTCCTCTCTaGACGAGAACTGGAATCGCT +
Preference number: 4 (lower is better)
Translates to: PWPNLAAKSEVTRSSPVFMSAPL*TRTGIA
Trigger: AGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT...GAACACTGGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAGTTTGGCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTGGTGCTCTCTCTTCCTaGAAGGCCAAGCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLGALSS*KAKQSC
Trigger: GCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACC...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTGGGTGCTCTCTCTTCCTaGAAGGCCAAGCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: GIASWCLFITATVMTGRLGALSS*KAKQSC
Trigger: GCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACC...CAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GCATTCTTCTTTTGGATGCTTGCATTGCATCCCAGTAAAGTGGCGGTGCTCTCTGGTGCTCTCTCTTCCTaGAAGGCCAAGCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: AFFFWMLALHPSKVAVLSGALSS*KAKQSC
Trigger: GCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACC...AGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTGCCAGTAAAGTGGCGGTaGTCTCTCTTCCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: GIASWCLFITATVMTGRLPVKWR*SLFLQG
Trigger: GCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGG...CAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGCCAGTAAAGTGGCGGTaGTCTCTCTTCCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: ENWNRFMVLIHNSHGYDGPVKWR*SLFLQG
Trigger: GCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGG...CCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp CTTTCCCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGCTTCAAGCGATTTTCCTaGCTCAGCCTCTCGAGTAAC +
Preference number: 4 (lower is better)
Translates to: LSHPGFCNQGPEFRVVLSFKRFS*LSLSSN
Trigger: GTTACTCGAGAGGCTGAGGCAGGAAAATCGCTTGAA...GCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp GTGAGCAGAGATGTGATCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATTTCAAGCGATTTTCCTaGCTCAGCCTCTCGAGTAAC +
Preference number: 4 (lower is better)
Translates to: VSRDVIQLSSPVPSSWADFKRFS*LSLSSN
Trigger: GTTACTCGAGAGGCTGAGGCAGGAAAATCGCTTGAA...ATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGATCACATCTCTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp AAGGCAGTGGGCACACTTGAGAAAGTCTGTCTCCCTTTGAATTCTCATTATCTCTTGCCCAGGCTGGAGTaGGATGGCGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KAVGTLEKVCLPLNSHYLLPRLE*DGAILA
Trigger: AGCCAAGATCGCGCCATCGCACTCCAGCCTGGGCAA...GAGATAATGAGAATTCAAAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR GCA 90 bp GGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTGGGAATATTCAGGGACTaGCAGGCACATCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GIASWCLFITATVMTGRLGIFRD*QAHRGS
Trigger: TGAGCCCCGATGTGCCTGGCAGTCCCTGAATATTCC...CAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377630.9
CDS-3UTR GCA 90 bp GAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGCTGACCGCTTACGTGTaGAAAACCGGGGGACTGGAA +
Preference number: 4 (lower is better)
Translates to: ENWNRFMVLIHNSHGYDGLTAYV*KTGGLE
Trigger: TTCCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAG...CCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp CCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGTTGGAAGAAGCAGGTTaGTTAACTTCTCTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: PLLVDVCSSLHENWNRFMLEEAG*LTSLSL
Trigger: GAGGCTCAGAGAAGTTAAGCAACCTGCTTCTTCCAA...CATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR CCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGCCGGGGGACTGGGACTaGCGGGTGGGTGGTCTAGAA +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMPGDWD*RVGGLE
Trigger: TTCTAGACCACCCACCCGCCAGTCCCAGTCCCCCGG...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
CDS-3UTR CCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACCCGGGGGACTGGGACTaGCGGGTGGGTGGTCTAGAA +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNPGDWD*RVGGLE
Trigger: TTCTAGACCACCCACCCGCCAGTCCCAGTCCCCCGG...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
CDS-3UTR CCA 90 bp GTGAGCAGGATTTCCTGTACCACAGGCCCGGCAAATTACCTTCTCCTTCAAGTGACAGCCAAATATGGGTaGGACAGGAGAGCCACATTC +
Preference number: 4 (lower is better)
Translates to: VSRISCTTGPANYLLLQVTAKYG*DRRATF
Trigger: GAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGT...CACTTGAAGGAGAAGGTAATTTGCCGGGCCTGTGGTACAGGAAATCCTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTGACGACAGCCAAATATaGGTGGGACAGGAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLDDSQI*VGQESH
Trigger: GTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTC...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp GGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTGACCTTCTCCTTCAAGTaGAGGCTTGCCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GIASWCLFITATVMTGRLTFSFK*RLACGC
Trigger: GCAGCCACAGGCAAGCCTCCACTTGAAGGAGAAGGT...CAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAGTCACTCACCCAGCTaGACCTGCTGCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALSHSPS*TCCRTA
Trigger: GGCTGTGCGGCAGCAGGTCCAGCTGGGTGAGTGACT...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp TCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACACTCTTCCTTCCCCCGTaGGTCCGACTTCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SAPLCTRTGIASWCLFITLFLPP*VRLPSA
Trigger: TGCTGAAGGAAGTCGGACCCACGGGGGAAGGAAGAG...TGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAGCGGCCCCCACTGCTaGTCGATGTCTGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALSGPHC*SMSAPL
Trigger: GAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCT...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp TTGGCAGCAAAGAGTGAGGTGACAAGGTCATCTCCAGTGTTCAGAGCCAGGTCGAGGTCGTATGCTGTCTaGCCTCCTGCATTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LAAKSEVTRSSPVFRARSRSYAV*PPAFFF
Trigger: AAAGAAGAATGCAGGAGGCCAGACAGCATACGACCT...CGACCTGGCTCTGAACACTGGAGATGACCTTGTCACCTCACTCTTTGCTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTGGCTGTGGGACAGAATaGGAGGGACGTATCCCTACA +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLGCGTE*EGRIPT
Trigger: TGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCC...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp CTCACAGGTGACACAGTATCTCAGGTGAGCAGGATTTCCTGTACCACAGGCCCGGCAAAACCGGGGGACTaGAAACTTTCTAAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: LTGDTVSQVSRISCTTGPAKPGD*KLSKVN
Trigger: GTTAACCTTAGAAAGTTTCCAGTCCCCCGGTTTTGC...CGGGCCTGTGGTACAGGAAATCCTGCTCACCTGAGATACTGTGTCACCTGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000460891.5
CDS-3UTR TCA 90 bp CCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGCATAACTTAGCTTTTCCAGGCTaGGGCACTCGTAATGGTATG +
Preference number: 4 (lower is better)
Translates to: PSWVLQSRPGIQGCSEHNLAFPG*GTRNGM
Trigger: CATACCATTACGAGTGCCTCAGCCTGGAAAAGCTAA...GTTATGCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR TCA 90 bp CTTGCATTGCATCCCAGTAAAGTGGCGGTGCTCTCTCTTCCTGCAAGGCCAAGCGACATCTGGAGTGTCTaGTTTCATTTCCAAAAGCGT +
Preference number: 4 (lower is better)
Translates to: LALHPSKVAVLSLPARPSDIWSV*FHFQKR
Trigger: ACGCTTTTGGAAATGAAATCAGACACTCCAGATGTC...GCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCAATGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp GGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTGGGAGAGCCACATTCTTaGCAGAAGCGAGCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GIASWCLFITATVMTGRLGEPHS*QKRAKG
Trigger: TCCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCC...CAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp CCTTGGCCAAACTTGGCAGCAAAGAGTGAGGTGACAAGGTCATCTCCAGTGTTCACACAGTATCTCAGGTaGGCAGGATTTCCTGTACCA +
Preference number: 4 (lower is better)
Translates to: PWPNLAAKSEVTRSSPVFTQYLR*AGFPVP
Trigger: TGGTACAGGAAATCCTGCTCACCTGAGATACTGTGT...GAACACTGGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAGTTTGGCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp ACATTTTGCCCATATACAACCCACAAGGCCATTTTAGGAGTGTTATGGCCTGTAGGGCCCCCTCACAGGTaGCACAGTATCTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: TFCPYTTHKAILGVLWPVGPPHR*HSISGE
Trigger: CTCACCTGAGATACTGTGTCACCTGTGAGGGGGCCC...TACAGGCCATAACACTCCTAAAATGGCCTTGTGGGTTGTATATGGGCAAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR TCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGACCCTCTTCCTGGGCTaGTGGCTGTCAGGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALTLFLG*WLSGGV
Trigger: AACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGT...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCTCAGAAGGTGATCGCTaGAATTCACTGCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GYDGSIVFITAVGVCSLISEGDR*NSLPCS
Trigger: TGAACAAGGCAGTGAATTTCAGCGATCACCTTCTGA...GATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGTTTTTCAATAGTATCTaGGGTACTCTGGCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWFFNSI*GTLAVV
Trigger: GACTACAGCCAGAGTACCTCAGATACTATTGAAAAA...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp GATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATCTTGGCAGCAAAGAGTaGGGTGACAAGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: DVCSSLHENWNRFMVLIHLGSKE*GDKVIS
Trigger: GGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAG...ATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGATGGTCAAGCTTAAGTaGAACCCCTATAAACTTCCT +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWMVKLK*NPYKLP
Trigger: AGGAAGTTTATAGGGGTTTCACTTAAGCTTGACCAT...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR GCA 90 bp CTTTCCCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGCACACCTTTGTCACAATaGCACTCTGTCTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LSHPGFCNQGPEFRVVLSTPLSQ*HSVCSL
Trigger: AAGACTGCAGACAGAGTGGCATTGTGACAAAGGTGT...GCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTCCTTCACACCTTTGTCACAATaGCACTCTGTCTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: VGVCSLIQQLFNHRDSSFTPLSQ*HSVCSL
Trigger: AAGACTGCAGACAGAGTGGCATTGTGACAAAGGTGT...GAAGGAAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGTTCTCATTATCTCCGTaGTTGTCAAACACTTCTGAC +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWFSLSP*LSNTSD
Trigger: GTCAGAAGTGTTTGACAAGCACGGAGATAATGAGAA...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp GTAGCAGAGATAAGCTTTCCCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCATGGGTACCAAGCTTCTaGATTCTGCACACAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VAEISFPILGSAIKARNSWVPSF*ILHTSP
Trigger: TGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCA...TGAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGAAAGCTTATCTCTGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp GTGAGCAGGATTTCCTGTACCACAGGCCCGGCAAATTACCTTCTCCACTATTCTTGGGTACCAAGCTTCTaGATTCTGCACACAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSRISCTTGPANYLLHYSWVPSF*ILHTSP
Trigger: TGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCA...AGAATAGTGGAGAAGGTAATTTGCCGGGCCTGTGGTACAGGAAATCCTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR GCA 90 bp GCCACGGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCATCGCTGAAATTCACTaGCTTGTTCAGGTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: ATVMTGRLSSSQQLGSAPIAEIH*LVQVKV
Trigger: AACCTTTACCTGAACAAGGCAGTGAATTTCAGCGAT...GGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACCGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GTAGCAGAGATAAGCTTTCCCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCAATGTCTGCTCCTCTCTaGACGAGAACTGGAATCGCT +
Preference number: 4 (lower is better)
Translates to: VAEISFPILGSAIKARNSMSAPL*TRTGIA
Trigger: AGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT...TGAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGAAAGCTTATCTCTGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp TGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTCTGCTGGTCGATGTCTaGTCCTCTCTGCACGAGAAC +
Preference number: 4 (lower is better)
Translates to: WNRFMVLIHNSHGYDGSILLVDV*SSLHEN
Trigger: GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG...AATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGCATTCTTCTTTTGGATaGTTGCATTGCATCCCAGTA +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWHSSFG*LHCIPV
Trigger: TACTGGGATGCAATGCAAGCATCCAAAAGAAGAATG...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GCCACGGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCCATTCTTCTTTTGGATaGTTGCATTGCATCCCAGTA +
Preference number: 4 (lower is better)
Translates to: ATVMTGRLSSSQQLGSAPHSSFG*LHCIPV
Trigger: TACTGGGATGCAATGCAAGCATCCAAAAGAAGAATG...GGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACCGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTAGGCGTAAGCCACTGTaGCAGCCATGCACGTATTCT +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLRRKPL*QPCTYS
Trigger: AGAATACGTGCATGGCTGGCACAGTGGCTTACGCCT...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp AACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGAGGCGTAAGCCACTGTaGCAGCCATGCACGTATTCT +
Preference number: 4 (lower is better)
Translates to: NWNRFMVLIHNSHGYDGSRRKPL*QPCTYS
Trigger: AGAATACGTGCATGGCTGGCACAGTGGCTTACGCCT...CGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp TGTATATTAGCTTATCAATTGTTACCCCATCCTGGCGGGCATGGTGGCTTATGCCTGACCGCTTACGTGTaGAAAACCGGGGGACTGGAA +
Preference number: 4 (lower is better)
Translates to: CILAYQLLPHPGGHGGLCLTAYV*KTGGLE
Trigger: TTCCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAG...GCATAAGCCACCATGCCCGCCAGGATGGGGTAACAATTGATAAGCTAATATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR GCA 90 bp CTCACAGGTGACACAGTATCTCAGGTGAGCAGGATTTCCTGTACCACAGGCCCGAGCTGTAGTGCAATTTaGCCTCCAAATCCATGTTCA +
Preference number: 4 (lower is better)
Translates to: LTGDTVSQVSRISCTTGPSCSAI*PPNPCS
Trigger: TGAACATGGATTTGGAGGGCAAATTGCACTACAGCT...CGGGCCTGTGGTACAGGAAATCCTGCTCACCTGAGATACTGTGTCACCTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGCTCCGCAGGGAGCCTaGTACCCGCCTGGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTAPQGA*YPPGVP
Trigger: AGGAACTCCAGGCGGGTACCAGGCTCCCTGCGGAGC...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262547.9
CDS-3UTR CCA 90 bp CGGGGCTCAGAAAAAGGGCGAGGTTCCTCAGCAGCTAGAGCCAGGCTTCTGTCCAGAGACTATATTTGGTaGTTCATAGTCTACGTGAAA +
Preference number: 4 (lower is better)
Translates to: RGSEKGRGSSAARARLLSRDYIW*FIVYVK
Trigger: TTTCACGTAGACTATGAACCACCAAATATAGTCTCT...GGACAGAAGCCTGGCTCTAGCTGCTGAGGAACCTCGCCCTTTTTCTGAGCCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000460891.5
CDS-3UTR CCA 90 bp TTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGGCCCCCTCACAGGTGAGGAGAGACTATATTTaGTGGTTCATAGTCTACGTG +
Preference number: 4 (lower is better)
Translates to: LSPLHIDSCDEGRAPSQVRRDYI*WFIVYV
Trigger: CACGTAGACTATGAACCACCAAATATAGTCTCTCCT...CACCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGAGGAGAGACTATATTTaGTGGTTCATAGTCTACGTG +
Preference number: 4 (lower is better)
Translates to: DGSIVFITAVGVCSLIQQRRDYI*WFIVYV
Trigger: CACGTAGACTATGAACCACCAAATATAGTCTCTCCT...CTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGCAAAACCGGGGGACTaGGACTGGCGGGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTAKPGD*DWRVGG
Trigger: ACCACCCACCCGCCAGTCCCAGTCCCCCGGTTTTGC...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
CDS-3UTR CCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTAGCTCCTTCTGGGGGTaGGAGACGACAGCCAAATAT +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLSSFWG*ETTAKY
Trigger: ATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCT...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp AAGTGGCGGTGCTCTCTCTTCCTGCAAGGCCAAGCAGAGTTGCTTCATGAAGAGAGATGGGAGTGTTCATaGGTACCAAGCTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: KWRCSLFLQGQAELLHEERWECS*VPSFCI
Trigger: AATGCAGAAGCTTGGTACCCATGAACACTCCCATCT...CTCTTCATGAAGCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp TTGGCAGCAAAGAGTGAGGTGACAAGGTCATCTCCAGTGTTCAGAGCCAGGTCGAGATGGGAGTGTTCATaGGTACCAAGCTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: LAAKSEVTRSSPVFRARSRWECS*VPSFCI
Trigger: AATGCAGAAGCTTGGTACCCATGAACACTCCCATCT...CGACCTGGCTCTGAACACTGGAGATGACCTTGTCACCTCACTCTTTGCTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp ATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACCTTCTCCTTCAAGTaGAGGCTTGCCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: MSAPLCTRTGIASWCLFITFSFK*RLACGC
Trigger: GCAGCCACAGGCAAGCCTCCACTTGAAGGAGAAGGT...TATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp CAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTTCCCAACATCAGATCTaGGCAAAGGAATATTCAGGG +
Preference number: 4 (lower is better)
Translates to: QQLGSAPSSSSCSITETLSQHQI*AKEYSG
Trigger: CCCTGAATATTCCTTTGCCCAGATCTGATGTTGGGA...AAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCTCACAACCATCTTCGTaGACAGTAGCAGAGATAAGC +
Preference number: 4 (lower is better)
Translates to: GYDGSIVFITAVGVCSLISQPSS*TVAEIS
Trigger: GCTTATCTCTGCTACTGTCCACGAAGATGGTTGTGA...GATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTCTTCATCACAGCAGTTaGGGTCTGCTCCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLLHHSS*GLLPHP
Trigger: TGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAG...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp TCCTGTACCACAGGCCCGGCAAATTACCTTCTCCTTCAAGTGGAGGCTTGCCTGACTGGAATCGCTTCATaGTGCTTATTCATAACAGCC +
Preference number: 4 (lower is better)
Translates to: SCTTGPANYLLLQVEACLTGIAS*CLFITA
Trigger: GGCTGTTATGAATAAGCACCATGAAGCGATTCCAGT...CAGGCAAGCCTCCACTTGAAGGAGAAGGTAATTTGCCGGGCCTGTGGTACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGAGCGGCCCCCACTGCTaGTCGATGTCTGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMSGPHC*SMSAPL
Trigger: GAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCT...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACAGCGGCCCCCACTGCTaGTCGATGTCTGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNSGPHC*SMSAPL
Trigger: GAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCT...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTGCATCCCAGTAAAGTaGCGGTGCTCTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLCIPVK*RCSLFL
Trigger: CAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCA...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GCAGAGCAGGAAAGGGAAAGGAGCCAGGCAAGATGCAGTTTCAGGCAAAGTCCAGCAAAACCGGGGGACTaGAAACTTTCTAAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: AEQERERSQARCSFRQSPAKPGD*KLSKVN
Trigger: GTTAACCTTAGAAAGTTTCCAGTCCCCCGGTTTTGC...TGGACTTTGCCTGAAACTGCATCTTGCCTGGCTCCTTTCCCTTTCCTGCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460891.5
3UTR CAA 72 bp TGCTTATTCATAACAGCCACGGTTATGACGGGTCGATaGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: CLFITATVMTGR*SSSQQLGSAPS
Trigger: TGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGACATTCCAGCTGCGTTaGTTTTCAGAGTTCTTATAT +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWTFQLR*FSEFLY
Trigger: ATATAAGAACTCTGAAAATCAACGCAGCTGGAATGT...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp CTTTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGGCCCCCTCACAGGACATTCCAGCTGCGTTaGTTTTCAGAGTTCTTATAT +
Preference number: 4 (lower is better)
Translates to: LYPHCTSTLVMKAGPPHRTFQLR*FSEFLY
Trigger: ATATAAGAACTCTGAAAATCAACGCAGCTGGAATGT...CCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR TCA 90 bp AAGGCAGTGGGCACACTTGAGAAAGTCTGTCTCCCTTTGAATTCTCATTATCTCGGGTGGTCTAGAACCTaGTCCTCCACCATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: KAVGTLEKVCLPLNSHYLGWSRT*SSTISW
Trigger: CCAGCTTATGGTGGAGGATCAGGTTCTAGACCACCC...GAGATAATGAGAATTCAAAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR TCA 90 bp GAGGCCAACAGTCTGTGTTCCTATGTCCCTCTTAGTCCCAACATCAGATCTGGGCTTGTCAAACACTTCTaGCCGCTTACGTGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: EANSLCSYVPLSPNIRSGLVKHF*PLTCAK
Trigger: TTTTGCACACGTAAGCGGTCAGAAGTGTTTGACAAG...CCCAGATCTGATGTTGGGACTAAGAGGGACATAGGAACACAGACTGTTGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR TCA 90 bp TCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGGCAGTGGGCACACTTaGGAAAGTCTGTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SAPLCTRTGIASWCLFITGSGHT*ESLSPF
Trigger: AAAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCC...TGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGCACACAAGCCCATCTaGGCTCCTTCTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTAHKPI*APSGGG
Trigger: CCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGTGC...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGGGGCCCCCTCACAGGTaGCACAGTATCTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMGPPHR*HSISGE
Trigger: CTCACCTGAGATACTGTGTCACCTGTGAGGGGGCCC...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp TCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAAATCGGGCAGACAGGTaGTTGCTGGCCCCACATTTA +
Preference number: 4 (lower is better)
Translates to: SAPLCTRTGIASWCLFITNRADR*LLAPHL
Trigger: TAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATT...TGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp CTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATAATCGGGCAGACAGGTaGTTGCTGGCCCCACATTTA +
Preference number: 4 (lower is better)
Translates to: LHENWNRFMVLIHNSHGYNRADR*LLAPHL
Trigger: TAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATT...ATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp GTAGCAGAGATAAGCTTTCCCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCATCTGAGCATAACACCTaGGGTGAGCAGAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: VAEISFPILGSAIKARNSSEHNT*GEQRCD
Trigger: ATCACATCTCTGCTCACCTCAGGTGTTATGCTCAGA...TGAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGAAAGCTTATCTCTGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTGCAGCAAAGAGTGAGGTaGCAAGGTCATCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: GIASWCLFITATVMTGRLQQRVR*QGHLQC
Trigger: ACACTGGAGATGACCTTGTCACCTCACTCTTTGCTG...CAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGTAGCCCTCACCAGGTaGAGTGGCCAAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTVALTR*SGQGRR
Trigger: CCTCCTGCCTTGGCCACTTCACCTGGTGAGGGCTAC...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR TCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGTTGGTTATTCCCATGTaGGAATTAAAGCTGCATGAT +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWLVIPM*ELKLHD
Trigger: ATCATGCAGCTTTAATTCTCACATGGGAATAACCAA...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR GCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGCTGACCGCTTACGTGTaGAAAACCGGGGGACTGGGA +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALLTAYV*KTGGLG
Trigger: TCCCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAG...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
CDS-3UTR GCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTGGGCTTTATCCCCACTaGACATCGACTCTTGTGATG +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLGLYPH*TSTLVM
Trigger: CATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCC...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp GATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATGGGCTTTATCCCCACTaGACATCGACTCTTGTGATG +
Preference number: 4 (lower is better)
Translates to: DVCSSLHENWNRFMVLIHGLYPH*TSTLVM
Trigger: CATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCC...ATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp TCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACATCCCATCCTGGGTTCTaGAATCAAGGCCCGGAATTC +
Preference number: 4 (lower is better)
Translates to: SAPLCTRTGIASWCLFITSHPGF*NQGPEF
Trigger: GAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGA...TGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp CCTTGGCCAAACTTGGCAGCAAAGAGTGAGGTGACAAGGTCATCTCCAGTGTTCGGAATCGCTTCATGGTaGTTATTCATAACAGCCACG +
Preference number: 4 (lower is better)
Translates to: PWPNLAAKSEVTRSSPVFGIASW*LFITAT
Trigger: CGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC...GAACACTGGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAGTTTGGCCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTATGTCTGCTCCTCTCTaGACGAGAACTGGAATCGCT +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLMSAPL*TRTGIA
Trigger: AGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTGATGTCTGCTCCTCTCTaGACGAGAACTGGAATCGCT +
Preference number: 4 (lower is better)
Translates to: GIASWCLFITATVMTGRLMSAPL*TRTGIA
Trigger: AGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT...CAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTCTTCTGCACACCACCTaGCCACACACAGTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLLLHTT*PHTVLK
Trigger: TTTAAGGACTGTGTGTGGGCAGGTGGTGTGCAGAAG...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR GCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGTTTATTCTGGAAACATaGAGCTTTGTATCTGGACTG +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWFILET*SFVSGL
Trigger: CAGTCCAGATACAAAGCTGCATGTTTCCAGAATAAA...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR GCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTCCCCTAATGCATCTCTaGCGCGCCCAACCCAGTCGC +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTPLMHL*RAQPSR
Trigger: GCGACTGGGTTGGGCGCGGCAGAGATGCATTAGGGG...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR GCA 90 bp CTTGCATTGCATCCCAGTAAAGTGGCGGTGCTCTCTCTTCCTGCAAGGCCAAGCATTCCTTCACAGAGTTaGCAAGTGCTAAAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: LALHPSKVAVLSLPARPSIPSQS*QVLKVG
Trigger: ACCAACTTTTAGCACTTGGCAACTCTGTGAAGGAAT...GCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCAATGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR CCA 90 bp GGCGGAGGAGGGGCTTTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGAGAGACTATATTTGGTaGTTCATAGTCTACGTGAAA +
Preference number: 4 (lower is better)
Translates to: GGGGALSPLHIDSCDEGRRDYIW*FIVYVK
Trigger: TTTCACGTAGACTATGAACCACCAAATATAGTCTCT...CCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCCCTCCTCCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR CCA 90 bp TGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTTTATGGAGGAGAGACTATATTTaGTGGTTCATAGTCTACGTG +
Preference number: 4 (lower is better)
Translates to: CLLQYPLPGLMAVRRGLWRRDYI*WFIVYV
Trigger: CACGTAGACTATGAACCACCAAATATAGTCTCTCCT...CCATAAACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR CCA 90 bp ACAGTCTGTGTTCCTATGTCCCTCTTAGTCCCAACATCAGATCTGGGCAAAGGACACACACCACACAGATaGGAGTGTTCATGGGTACCA +
Preference number: 4 (lower is better)
Translates to: TVCVPMSLLVPTSDLGKGHTPHR*ECSWVP
Trigger: TGGTACCCATGAACACTCCCATCTGTGTGGTGTGTG...TCCTTTGCCCAGATCTGATGTTGGGACTAAGAGGGACATAGGAACACAGACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR CCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACCAGGAATGCCGAGCATaGCTCCACACCAGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNQECRA*LHTSRR
Trigger: TCTGCGGCTGGTGTGGAGCCATGCTCGGCATTCCTG...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTAGTCACTCACCCAGCTaGACCTGCTGCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTSHSPS*TCCRTA
Trigger: GGCTGTGCGGCAGCAGGTCCAGCTGGGTGAGTGACT...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp AAGGCCAAGCAGAGTTGCTTCATGAAGAGCTGTATTTCTGAGCGGCCCCCACTGACTGGAATCGCTTCATaGTGCTTATTCATAACAGCC +
Preference number: 4 (lower is better)
Translates to: KAKQSCFMKSCISERPPLTGIAS*CLFITA
Trigger: GGCTGTTATGAATAAGCACCATGAAGCGATTCCAGT...CAGTGGGGGCCGCTCAGAAATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp ATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATATGCATCCCAGTAAAGTaGCGGTGCTCTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: MSAPLCTRTGIASWCLFICIPVK*RCSLFL
Trigger: CAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCA...TATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTAGCCTCTCGAGTAACTaGGATTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLSLSSN*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGTTACTCGAGAGGCT...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTACAACTGTGGGAGTCTaGGTAACAACAGAGGGACCA +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLTTVGV*VTTEGP
Trigger: TGGTCCCTCTGTTGTTACCCAGACTCCCACAGTTGT...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CCA 90 bp CTCACAGGTGACACAGTATCTCAGGTGAGCAGGATTTCCTGTACCACAGGCCCGATTGATAATGACCAGTaGTGCTCAAGTGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LTGDTVSQVSRISCTTGPIDNDQ*CSSVPF
Trigger: GAAAGGAACACTTGAGCACCACTGGTCATTATCAAT...CGGGCCTGTGGTACAGGAAATCCTGCTCACCTGAGATACTGTGTCACCTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR CCA 90 bp ATGACCAGTGGTGCTCAAGTGTTCCTTTCTAGTCCAGCACTGCGGTCCCTAGATTCCCGTGGACACTTGTaGAGTGGAAATTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: MTSGAQVFLSSPALRSLDSRGHL*SGNFIS
Trigger: TGAGATGAAATTTCCACTCCACAAGTGTCCACGGGA...ATCTAGGGACCGCAGTGCTGGACTAGAAAGGAACACTTGAGCACCACTGGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR CCA 90 bp CCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGCATAACCCCTTTCCTCTTCCATaGTCTAATCTCCATACTGTG +
Preference number: 4 (lower is better)
Translates to: PSWVLQSRPGIQGCSEHNPFPLP*SNLHTV
Trigger: CACAGTATGGAGATTAGACCATGGAAGAGGAAAGGG...GTTATGCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR TCA 90 bp ATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATACTGAGGGACACACACTaGACCAGCAGTCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: MSAPLCTRTGIASWCLFILRDTH*TSSHFL
Trigger: GAGAAAATGACTGCTGGTTCAGTGTGTGTCCCTCAG...TATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTCGTAATGGTATGATCTaGGGGACACACACTGAACCA +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLRNGMI*GTHTEP
Trigger: TGGTTCAGTGTGTGTCCCTCAGATCATACCATTACG...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTTCCAGGCTaGGGCACTCGTAATGGTATG +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLLAFPG*GTRNGM
Trigger: CATACCATTACGAGTGCCTCAGCCTGGAAAAGCTAA...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTTAGCTTTTCCAGGCTaGGGCACTCGTAATGGTATG +
Preference number: 4 (lower is better)
Translates to: ENWNRFMVLIHNSHGYDGLAFPG*GTRNGM
Trigger: CATACCATTACGAGTGCCTCAGCCTGGAAAAGCTAA...CCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp GAGGCCAACAGTCTGTGTTCCTATGTCCCTCTTAGTCCCAACATCAGATCTGGGGACATCTGGAGTGTCTaGTTTCATTTCCAAAAGCGT +
Preference number: 4 (lower is better)
Translates to: EANSLCSYVPLSPNIRSGDIWSV*FHFQKR
Trigger: ACGCTTTTGGAAATGAAATCAGACACTCCAGATGTC...CCCAGATCTGATGTTGGGACTAAGAGGGACATAGGAACACAGACTGTTGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR TCA 90 bp CAGGCCCGGCAAATTACCTTCTCCACTATTCTCTCAGGATACAATCTTTTTCCAGGAGAGCCACATTCTTaGCAGAAGCGAGCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: QARQITFSTILSGYNLFPGEPHS*QKRAKG
Trigger: TCCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCC...TGGAAAAAGATTGTATCCTGAGAGAATAGTGGAGAAGGTAATTTGCCGGGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR TCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGGGCCCCCTCACAGGTaGCACAGTATCTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTGPPHR*HSISGE
Trigger: CTCACCTGAGATACTGTGTCACCTGTGAGGGGGCCC...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTCTGAGCATAACACCTaGGGTGAGCAGAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLSEHNT*GEQRCD
Trigger: ATCACATCTCTGCTCACCTCAGGTGTTATGCTCAGA...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GCATTCTTCTTTTGGATGCTTGCATTGCATCCCAGTAAAGTGGCGGTGCTCTCTTCTGAGCATAACACCTaGGGTGAGCAGAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: AFFFWMLALHPSKVAVLSSEHNT*GEQRCD
Trigger: ATCACATCTCTGCTCACCTCAGGTGTTATGCTCAGA...AGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp GTGAGCAGAGATGTGATCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATTTTTTCAATAGTATCTaGGGTACTCTGGCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: VSRDVIQLSSPVPSSWADFFNSI*GTLAVV
Trigger: GACTACAGCCAGAGTACCTCAGATACTATTGAAAAA...ATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGATCACATCTCTGCTCAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCTTTTTCAATAGTATCTaGGGTACTCTGGCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: GYDGSIVFITAVGVCSLIFFNSI*GTLAVV
Trigger: GACTACAGCCAGAGTACCTCAGATACTATTGAAAAA...GATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGCTGAGGCTCCTAGTTTaGGCGAGTTGGTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALLRLLV*ASWSSS
Trigger: GCTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAG...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAGCCCCGCCCACTGGGTaGTGGGCAGATGATTGGTGG +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIAPPTG*WADDWW
Trigger: CCACCAATCATCTGCCCAGCACCCAGTGGGCGGGGC...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262547.9
CDS-3UTR GCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACCTGACCGCTTACGTGTaGAAAACCGGGGGACTGGGA +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNLTAYV*KTGGLG
Trigger: TCCCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAG...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
CDS-3UTR GCA 90 bp ATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATACAAGCTTCTGCATTCTaGACACAAGCCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: MSAPLCTRTGIASWCLFIQASAF*TQAHLS
Trigger: GCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTG...TATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp ACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGTGGGTACCAAGCTTCTaGATTCTGCACACAAGCCCA +
Preference number: 4 (lower is better)
Translates to: TRTGIASWCLFITATVMTWVPSF*ILHTSP
Trigger: TGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCA...CGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTGCTGTCTGGCCTCCTaGATTCTTCTTTTGGATGCT +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLCCLAS*ILLLDA
Trigger: AGCATCCAAAAGAAGAATGCAGGAGGCCAGACAGCA...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp AACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGTGCTGTCTGGCCTCCTaGATTCTTCTTTTGGATGCT +
Preference number: 4 (lower is better)
Translates to: NWNRFMVLIHNSHGYDGSCCLAS*ILLLDA
Trigger: AGCATCCAAAAGAAGAATGCAGGAGGCCAGACAGCA...CGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGCAGAGCCAGGTCGTATaGTGTCTGGCCTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALQSQVV*CLASCI
Trigger: AATGCAGGAGGCCAGACAGCATACGACCTGGCTCTG...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GCATTCTTCTTTTGGATGCTTGCATTGCATCCCAGTAAAGTGGCGGTGCTCTCTTTCAAGCGATTTTCCTaGCTCAGCCTCTCGAGTAAC +
Preference number: 4 (lower is better)
Translates to: AFFFWMLALHPSKVAVLSFKRFS*LSLSSN
Trigger: GTTACTCGAGAGGCTGAGGCAGGAAAATCGCTTGAA...AGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTTTGCCCAGGCTGGAGTaGGATGGCGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTLPRLE*DGAILA
Trigger: AGCCAAGATCGCGCCATCGCACTCCAGCCTGGGCAA...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGTATACCACATGTATGTaGATATCTAACTCTGCACAA +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWYTTCM*ISNSAQ
Trigger: TTGTGCAGAGTTAGATATGCACATACATGTGGTATA...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GGCTCAGAAAAAGGGCGAGGTTCCTCAGCAGCTAGAGCCAGGCTTCTGTCCAAGTATACCACATGTATGTaGATATCTAACTCTGCACAA +
Preference number: 4 (lower is better)
Translates to: GSEKGRGSSAARARLLSKYTTCM*ISNSAQ
Trigger: TTGTGCAGAGTTAGATATGCACATACATGTGGTATA...CTTGGACAGAAGCCTGGCTCTAGCTGCTGAGGAACCTCGCCCTTTTTCTGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377630.9
CDS-3UTR GCA 90 bp GAGGCTCCTAGTTTGAGCGAGTTGGTCCTCAAGCCCTTGGCCAAACTTGGCAGCTATACCACATGTATGTaGATATCTAACTCTGCACAA +
Preference number: 4 (lower is better)
Translates to: EAPSLSELVLKPLAKLGSYTTCM*ISNSAQ
Trigger: TTGTGCAGAGTTAGATATGCACATACATGTGGTATA...GCTGCCAAGTTTGGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGGAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp ACCACAGGAGCCACAGAATCGGGCAGACAGGTGATTGCTGGCCCCACATTTAGGACAGACATGTTTATATaGTATGTGTACTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: TTGATESGRQVIAGPTFRTDMFI*YVYSSV
Trigger: TACAGAGGAGTACACATAGCATATAAACATGTCTGT...CCTAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATTCTGTGGCTCCTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGAGAGACTATATTTGGTaGTTCATAGTCTACGTGAAA +
Preference number: 4 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWRDYIW*FIVYVK
Trigger: TTTCACGTAGACTATGAACCACCAAATATAGTCTCT...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp GGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTGTCCTCCACCATAAGCTaGGATTTCCAATGGACTCTC +
Preference number: 4 (lower is better)
Translates to: GIASWCLFITATVMTGRLSSTIS*DFQWTL
Trigger: GAGAGTCCATTGGAAATCCCAGCTTATGGTGGAGGA...CAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATACCGGGGGACTGGGACTaGCGGGTGGGTGGTCTAGAA +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIPGDWD*RVGGLE
Trigger: TTCTAGACCACCCACCCGCCAGTCCCAGTCCCCCGG...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
CDS-3UTR CCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGGACGACAGCCAAATATaGGTGGGACAGGAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALDDSQI*VGQESH
Trigger: GTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTC...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTCAGGAATGCCGAGCATaGCTCCACACCAGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTQECRA*LHTSRR
Trigger: TCTGCGGCTGGTGTGGAGCCATGCTCGGCATTCCTG...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTGTCAGGAGGGGTTTATaGTCACTCATTTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLVRRGL*SLIFSC
Trigger: GCAGGAGAAAATGAGTGACCATAAACCCCTCCTGAC...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGCTCTTCCTTCCCCCGTaGGTCCGACTTCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMLFLPP*VRLPSA
Trigger: TGCTGAAGGAAGTCGGACCCACGGGGGAAGGAAGAG...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp AACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGTCTCTGCACGAGAACTaGAATCGCTTCATGGTGCTT +
Preference number: 4 (lower is better)
Translates to: NWNRFMVLIHNSHGYDGSSLHEN*NRFMVL
Trigger: AAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGA...CGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp AAGGCCAAGCAGAGTTGCTTCATGAAGAGCTGTATTTCTGAGCGGCCCCCACTGATACAGAACAGTGTGTaGTTGGTTTGCTACCATTTG +
Preference number: 4 (lower is better)
Translates to: KAKQSCFMKSCISERPPLIQNSV*LVCYHL
Trigger: CAAATGGTAGCAAACCAACCACACACTGTTCTGTAT...CAGTGGGGGCCGCTCAGAAATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp GTTTTTACAGAATCACATTTCATTACCTTCAAGTGGAGGCTTGCCTGTGGCTGCCTGCATCCTTTCGGCTaGAGTAAGGGAAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VFTESHFITFKWRLACGCLHPFG*SKGSSS
Trigger: GGAAGAGCTTCCCTTACTCCAGCCGAAAGGATGCAG...GCAGCCACAGGCAAGCCTCCACTTGAAGGTAATGAAATGTGATTCTGTAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR CCA 90 bp CAGGCCCGGCAAATTACCTTCTCCACTATTCTCTCAGGATACAATCTTTTTCCAATTGTTACCCCATCCTaGCGGGCATGGTGGCTTATG +
Preference number: 4 (lower is better)
Translates to: QARQITFSTILSGYNLFPIVTPS*RAWWLM
Trigger: CATAAGCCACCATGCCCGCCAGGATGGGGTAACAAT...TGGAAAAAGATTGTATCCTGAGAGAATAGTGGAGAAGGTAATTTGCCGGGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR TCA 90 bp TGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTCGTAATGGTATGATCTaGGGGACACACACTGAACCA +
Preference number: 4 (lower is better)
Translates to: WNRFMVLIHNSHGYDGSIRNGMI*GTHTEP
Trigger: TGGTTCAGTGTGTGTCCCTCAGATCATACCATTACG...AATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp GTTTTTACAGAATCACATTTCATTACCTTCAAGTGGAGGCTTGCCTGTGGCTGCGCACTCGTAATGGTATaGTCTGAGGGACACACACTG +
Preference number: 4 (lower is better)
Translates to: VFTESHFITFKWRLACGCALVMV*SEGHTL
Trigger: CAGTGTGTGTCCCTCAGATCATACCATTACGAGTGC...GCAGCCACAGGCAAGCCTCCACTTGAAGGTAATGAAATGTGATTCTGTAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR TCA 90 bp TTGGCAGCAAAGAGTGAGGTGACAAGGTCATCTCCAGTGTTCAGAGCCAGGTCGACATTCCAGCTGCGTTaGTTTTCAGAGTTCTTATAT +
Preference number: 4 (lower is better)
Translates to: LAAKSEVTRSSPVFRARSTFQLR*FSEFLY
Trigger: ATATAAGAACTCTGAAAATCAACGCAGCTGGAATGT...CGACCTGGCTCTGAACACTGGAGATGACCTTGTCACCTCACTCTTTGCTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGGGGTGGTCTAGAACCTaGTCCTCCACCATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMGWSRT*SSTISW
Trigger: CCAGCTTATGGTGGAGGATCAGGTTCTAGACCACCC...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000608192.5
CDS-3UTR TCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTCTTGTCAAACACTTCTaGCCGCTTACGTGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLLVKHF*PLTCAK
Trigger: TTTTGCACACGTAAGCGGTCAGAAGTGTTTGACAAG...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGCTTGTCAAACACTTCTaGCCGCTTACGTGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: ENWNRFMVLIHNSHGYDGLVKHF*PLTCAK
Trigger: TTTTGCACACGTAAGCGGTCAGAAGTGTTTGACAAG...CCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGGGCAGTGGGCACACTTaGGAAAGTCTGTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALGSGHT*ESLSPF
Trigger: AAAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCC...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGGGAGAGCCACATTCTTaGCAGAAGCGAGCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALGEPHS*QKRAKG
Trigger: TCCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCC...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAGCACACAAGCCCATCTaGGCTCCTTCTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIAHKPI*APSGGG
Trigger: CCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGTGC...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAATCGGGCAGACAGGTaGTTGCTGGCCCCACATTTA +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALNRADR*LLAPHL
Trigger: TAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATT...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGGCACTGCTCAGAAGGTaGTCGCTGAAATTCACTGCC +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALALLRR*SLKFTA
Trigger: GGCAGTGAATTTCAGCGATCACCTTCTGAGCAGTGC...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGCTTGGCAGCAAAGAGTaGGGTGACAAGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALLGSKE*GDKVIS
Trigger: GGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAG...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGCTGAGGCTCCTAGTTTaGGCGAGTTGGTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMLRLLV*ASWSSS
Trigger: GCTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAG...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp GCAGAGCAGGAAAGGGAAAGGAGCCAGGCAAGATGCAGTTTCAGGCAAAGTCCAAGGCAAACAAAAGTATaGGCCACTTTAAGGACAAAA +
Preference number: 4 (lower is better)
Translates to: AEQERERSQARCSFRQSPRQTKV*ATLRTK
Trigger: TTTTGTCCTTAAAGTGGCTCATACTTTTGTTTGCCT...TGGACTTTGCCTGAAACTGCATCTTGCCTGGCTCCTTTCCCTTTCCTGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR GCA 90 bp GAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGACACCTTTGTCACAATaGCACTCTGTCTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: ENWNRFMVLIHNSHGYDGTPLSQ*HSVCSL
Trigger: AAGACTGCAGACAGAGTGGCATTGTGACAAAGGTGT...CCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTCTGACCGCTTACGTGTaGAAAACCGGGGGACTGGGA +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTLTAYV*KTGGLG
Trigger: TCCCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAG...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
CDS-3UTR GCA 90 bp CAGGCCCGGCAAATTACCTTCTCCACTATTCTCTCAGGATACAATCTTTTTCCACAAGCTTCTGCATTCTaGACACAAGCCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: QARQITFSTILSGYNLFPQASAF*TQAHLS
Trigger: GCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTG...TGGAAAAAGATTGTATCCTGAGAGAATAGTGGAGAAGGTAATTTGCCGGGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR GCA 90 bp AAGGCAGTGGGCACACTTGAGAAAGTCTGTCTCCCTTTGAATTCTCATTATCTCCAAGCTTCTGCATTCTaGACACAAGCCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: KAVGTLEKVCLPLNSHYLQASAF*TQAHLS
Trigger: GCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTG...GAGATAATGAGAATTCAAAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR GCA 90 bp CCTTGGCCAAACTTGGCAGCAAAGAGTGAGGTGACAAGGTCATCTCCAGTGTTCATCGCTGAAATTCACTaGCTTGTTCAGGTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: PWPNLAAKSEVTRSSPVFIAEIH*LVQVKV
Trigger: AACCTTTACCTGAACAAGGCAGTGAATTTCAGCGAT...GAACACTGGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAGTTTGGCCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTGGAATCGCTTCATGGTaGTTATTCATAACAGCCACG +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLGIASW*LFITAT
Trigger: CGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACCTGCTGGTCGATGTCTaGTCCTCTCTGCACGAGAAC +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNLLVDV*SSLHEN
Trigger: GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATACTGAGCGGCCCCCACTaGTGGTCGATGTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGILSGPH*WSMSAP
Trigger: AGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAG...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GCAGCTAGAGCCAGGCTTCTGTCCAAGCTAAGTTTCACTAGGGACTTCACACAAAAGGCCAAGCAGAGTTaGTTCATGAAGAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: AARARLLSKLSFTRDFTQKAKQS*FMKSCI
Trigger: AATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTT...TTGTGTGAAGTCCCTAGTGAAACTTAGCTTGGACAGAAGCCTGGCTCTAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGCCAGTAAAGTGGCGGTaGTCTCTCTTCCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMPVKWR*SLFLQG
Trigger: GCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGG...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACGATGCTCACACCCAGTaGCTGAAGCGTCACACATCC +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNDAHTQ*LKRHTS
Trigger: GGATGTGTGACGCTTCAGGCACTGGGTGTGAGCATC...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGGTATCTGGACTGGGCTaGTCAGCTGGCAGCACATCT +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMVSGLG*SAGSTS
Trigger: AGATGTGCTGCCAGCTGAGCAGCCCAGTCCAGATAC...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGGGAATATTCAGGGACTaGCAGGCACATCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMGIFRD*QAHRGS
Trigger: TGAGCCCCGATGTGCCTGGCAGTCCCTGAATATTCC...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357236.8
ENST00000377630.9
CDS-3UTR CCA 90 bp TCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACATGGGCAGATGATTGGTaGAGACTCAGCTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: SAPLCTRTGIASWCLFITWADDW*RLSFLA
Trigger: TGCTAAGAAGCTGAGTCTCCACCAATCATCTGCCCA...TGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR CCA 90 bp CAGGCCCGGCAAATTACCTTCTCCACTATTCTCTCAGGATACAATCTTTTTCCAACAGCCAAATATGGGTaGGACAGGAGAGCCACATTC +
Preference number: 4 (lower is better)
Translates to: QARQITFSTILSGYNLFPTAKYG*DRRATF
Trigger: GAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGT...TGGAAAAAGATTGTATCCTGAGAGAATAGTGGAGAAGGTAATTTGCCGGGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR CCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTAGATGGGAGTGTTCATaGGTACCAAGCTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLRWECS*VPSFCI
Trigger: AATGCAGAAGCTTGGTACCCATGAACACTCCCATCT...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ACAGTCTGTGTTCCTATGTCCCTCTTAGTCCCAACATCAGATCTGGGCAAAGGAAGATGGGAGTGTTCATaGGTACCAAGCTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: TVCVPMSLLVPTSDLGKGRWECS*VPSFCI
Trigger: AATGCAGAAGCTTGGTACCCATGAACACTCCCATCT...TCCTTTGCCCAGATCTGATGTTGGGACTAAGAGGGACATAGGAACACAGACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAGATGGGAGTGTTCATaGGTACCAAGCTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: DVCSSLHENWNRFMVLIHRWECS*VPSFCI
Trigger: AATGCAGAAGCTTGGTACCCATGAACACTCCCATCT...ATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGACCTTCTCCTTCAAGTaGAGGCTTGCCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMTFSFK*RLACGC
Trigger: GCAGCCACAGGCAAGCCTCCACTTGAAGGAGAAGGT...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTCCCAACATCAGATCTaGGCAAAGGAATATTCAGGG +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLSQHQI*AKEYSG
Trigger: CCCTGAATATTCCTTTGCCCAGATCTGATGTTGGGA...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp GAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCCCAACATCAGATCTaGGCAAAGGAATATTCAGGG +
Preference number: 4 (lower is better)
Translates to: ENWNRFMVLIHNSHGYDGSQHQI*AKEYSG
Trigger: CCCTGAATATTCCTTTGCCCAGATCTGATGTTGGGA...CCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp TCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACTCACAACCATCTTCGTaGACAGTAGCAGAGATAAGC +
Preference number: 4 (lower is better)
Translates to: SSLHENWNRFMVLIHNSHSQPSS*TVAEIS
Trigger: GCTTATCTCTGCTACTGTCCACGAAGATGGTTGTGA...GTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAAGTCACTCACCCAGCTaGACCTGCTGCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGISHSPS*TCCRTA
Trigger: GGCTGTGCGGCAGCAGGTCCAGCTGGGTGAGTGACT...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTCTCTTCCTTCCCCCGTaGGTCCGACTTCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTLFLPP*VRLPSA
Trigger: TGCTGAAGGAAGTCGGACCCACGGGGGAAGGAAGAG...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAAGCGGCCCCCACTGCTaGTCGATGTCTGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGISGPHC*SMSAPL
Trigger: GAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCT...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTGCCTGCATTCTTCTTTTaGATGCTTGCATTGCATCCC +
Preference number: 4 (lower is better)
Translates to: GIASWCLFITATVMTGRLPAFFF*MLALHP
Trigger: GGGATGCAATGCAAGCATCCAAAAGAAGAATGCAGG...CAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp CTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATAGGTCGTATGCTGTCTaGCCTCCTGCATTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LHENWNRFMVLIHNSHGYRSYAV*PPAFFF
Trigger: AAAGAAGAATGCAGGAGGCCAGACAGCATACGACCT...ATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACGGCTGTGGGACAGAATaGGAGGGACGTATCCCTACA +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNGCGTE*EGRIPT
Trigger: TGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCC...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GTTTTTACAGAATCACATTTCATTACCTTCAAGTGGAGGCTTGCCTGTGGCTGCTTCATTACCTTCAAGTaGAGGCTTGCCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VFTESHFITFKWRLACGCFITFK*RLACGC
Trigger: GCAGCCACAGGCAAGCCTCCACTTGAAGGTAATGAA...GCAGCCACAGGCAAGCCTCCACTTGAAGGTAATGAAATGTGATTCTGTAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR CCA 90 bp GCAGAGCAGGAAAGGGAAAGGAGCCAGGCAAGATGCAGTTTCAGGCAAAGTCCAATTTTAGGAGTGTTATaGCCTGTACATAATGCCATG +
Preference number: 4 (lower is better)
Translates to: AEQERERSQARCSFRQSPILGVL*PVHNAM
Trigger: CATGGCATTATGTACAGGCCATAACACTCCTAAAAT...TGGACTTTGCCTGAAACTGCATCTTGCCTGGCTCCTTTCCCTTTCCTGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR TCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGGCACTCGTAATGGTATaGTCTGAGGGACACACACTG +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALALVMV*SEGHTL
Trigger: CAGTGTGTGTCCCTCAGATCATACCATTACGAGTGC...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTGACATCTGGAGTGTCTaGTTTCATTTCCAAAAGCGT +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLDIWSV*FHFQKR
Trigger: ACGCTTTTGGAAATGAAATCAGACACTCCAGATGTC...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGGGTGGTCTAGAACCTaGTCCTCCACCATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTGWSRT*SSTISW
Trigger: CCAGCTTATGGTGGAGGATCAGGTTCTAGACCACCC...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000608192.5
CDS-3UTR TCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGGGCAGTGGGCACACTTaGGAAAGTCTGTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMGSGHT*ESLSPF
Trigger: AAAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCC...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACGGAGAGCCACATTCTTaGCAGAAGCGAGCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNGEPHS*QKRAKG
Trigger: TCCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCC...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAGGGCCCCCTCACAGGTaGCACAGTATCTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIGPPHR*HSISGE
Trigger: CTCACCTGAGATACTGTGTCACCTGTGAGGGGGCCC...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGCTTGGCAGCAAAGAGTaGGGTGACAAGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMLGSKE*GDKVIS
Trigger: GGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAG...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACCTTGGCAGCAAAGAGTaGGGTGACAAGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNLGSKE*GDKVIS
Trigger: GGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAG...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp CAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTTTAGAAATTCAGGTTTaGTGCCATCCAGAGTATAAT +
Preference number: 4 (lower is better)
Translates to: QQLGSAPSSSSCSITETLLEIQV*CHPEYN
Trigger: ATTATACTCTGGATGGCAGCAAACCTGAATTTCTAA...AAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAACTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GTAGCAGAGATAAGCTTTCCCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCATTCTCATTATCTCCGTaGTTGTCAAACACTTCTGAC +
Preference number: 4 (lower is better)
Translates to: VAEISFPILGSAIKARNSFSLSP*LSNTSD
Trigger: GTCAGAAGTGTTTGACAAGCACGGAGATAATGAGAA...TGAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGAAAGCTTATCTCTGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGTCCCATCCTGGGTTCTaGAATCAAGGCCCGGAATTC +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMSHPGF*NQGPEF
Trigger: GAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGA...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp ATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAGGAATCGCTTCATGGTaGTTATTCATAACAGCCACG +
Preference number: 4 (lower is better)
Translates to: MSAPLCTRTGIASWCLFIGIASW*LFITAT
Trigger: CGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC...TATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTCTGCTGGTCGATGTCTaGTCCTCTCTGCACGAGAAC +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTLLVDV*SSLHEN
Trigger: GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTCCAGTAAAGTGGCGGTaGTCTCTCTTCCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTPVKWR*SLFLQG
Trigger: GCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGG...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTCAGAGCCAGGTCGTATaGTGTCTGGCCTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTQSQVV*CLASCI
Trigger: AATGCAGGAGGCCAGACAGCATACGACCTGGCTCTG...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTCTTGAGTCCCACCCATaGCTGCATCTACCAACCTCC +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTLESHP*LHLPTS
Trigger: GGAGGTTGGTAGATGCAGGCATGGGTGGGACTCAAG...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATACCGCCCACTGGGTGCTaGGCAGATGATTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIPPTGC*ADDWWR
Trigger: TCTCCACCAATCATCTGCCCAGCACCCAGTGGGCGG...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262547.9
CDS-3UTR CCA 90 bp GTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTCCTTCAGAGACTATATTTGGTaGTTCATAGTCTACGTGAAA +
Preference number: 4 (lower is better)
Translates to: VGVCSLIQQLFNHRDSSFRDYIW*FIVYVK
Trigger: TTTCACGTAGACTATGAACCACCAAATATAGTCTCT...GAAGGAAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp AGGATTTCCTGTACCACAGGCCCGGCAAATTACCTTCTCCTTCAAGTGGAGGCTTTCCAATGGACTCTCTaGAAACTTTCTAAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: RISCTTGPANYLLLQVEAFQWTL*KLSKVN
Trigger: GTTAACCTTAGAAAGTTTCCAGAGAGTCCATTGGAA...AGCCTCCACTTGAAGGAGAAGGTAATTTGCCGGGCCTGTGGTACAGGAAATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR CCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGACAGCCAAATATGGGTaGGACAGGAGAGCCACATTC +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALTAKYG*DRRATF
Trigger: GAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGT...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGACGACAGCCAAATATaGGTGGGACAGGAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTDDSQI*VGQESH
Trigger: GTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTC...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTACCTTCTCCTTCAAGTaGAGGCTTGCCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTTFSFK*RLACGC
Trigger: GCAGCCACAGGCAAGCCTCCACTTGAAGGAGAAGGT...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGCTTCATCACAGCAGTTaGGGTCTGCTCCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMLHHSS*GLLPHP
Trigger: TGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAG...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACCTTCATCACAGCAGTTaGGGTCTGCTCCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNLHHSS*GLLPHP
Trigger: TGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAG...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGGCTGTGGGACAGAATaGGAGGGACGTATCCCTACA +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTGCGTE*EGRIPT
Trigger: TGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCC...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTCTTGCTGACATATGTTaGCTTAGCCCCCGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTLADIC*LSPRRR
Trigger: CCGCCTTCGGGGGCTAAGCCAACATATGTCAGCAAG...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACCTGCATCCTTTCGGCTaGAGTAAGGGAAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNLHPFG*SKGSSS
Trigger: GGAAGAGCTTCCCTTACTCCAGCCGAAAGGATGCAG...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR TCA 90 bp TGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTGACATCTGGAGTGTCTaGTTTCATTTCCAAAAGCGT +
Preference number: 4 (lower is better)
Translates to: WNRFMVLIHNSHGYDGSIDIWSV*FHFQKR
Trigger: ACGCTTTTGGAAATGAAATCAGACACTCCAGATGTC...AATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGCACTGCTCAGAAGGTaGTCGCTGAAATTCACTGCC +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTALLRR*SLKFTA
Trigger: GGCAGTGAATTTCAGCGATCACCTTCTGAGCAGTGC...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTTTTCAATAGTATCTaGGGTACTCTGGCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLFFNSI*GTLAVV
Trigger: GACTACAGCCAGAGTACCTCAGATACTATTGAAAAA...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACCAGCAAAGAGTGAGGTaGCAAGGTCATCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNQQRVR*QGHLQC
Trigger: ACACTGGAGATGACCTTGTCACCTCACTCTTTGCTG...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACGCACGTATTCTTAAATaGAGTCCCGTGGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNARILK*SPVEAS
Trigger: TGAGGCCTCCACGGGACTTCATTTAAGAATACGTGC...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGTTGGTCCCTCACACCTaGTTCAAGCCTAAGCACTTG +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMLVPHT*FKPKHL
Trigger: CAAGTGCTTAGGCTTGAATCAGGTGTGAGGGACCAA...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR GCA 90 bp GCATTCTTCTTTTGGATGCTTGCATTGCATCCCAGTAAAGTGGCGGTGCTCTCTTTCTCATTATCTCCGTaGTTGTCAAACACTTCTGAC +
Preference number: 4 (lower is better)
Translates to: AFFFWMLALHPSKVAVLSFSLSP*LSNTSD
Trigger: GTCAGAAGTGTTTGACAAGCACGGAGATAATGAGAA...AGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACCAAGCTTCTGCATTCTaGACACAAGCCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNQASAF*TQAHLS
Trigger: GCTCAGATGGGCTTGTGTGCAGAATGCAGAAGCTTG...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGTGGGTACCAAGCTTCTaGATTCTGCACACAAGCCCA +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMWVPSF*ILHTSP
Trigger: TGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCA...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGGGGCTTTATCCCCACTaGACATCGACTCTTGTGATG +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMGLYPH*TSTLVM
Trigger: CATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCC...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTATCGCTGAAATTCACTaGCTTGTTCAGGTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLIAEIH*LVQVKV
Trigger: AACCTTTACCTGAACAAGGCAGTGAATTTCAGCGAT...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp CTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATAAGGCCAAGCAGAGTTaGTTCATGAAGAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: LHENWNRFMVLIHNSHGYKAKQS*FMKSCI
Trigger: AATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTT...ATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp TCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAAAGGCCAAGCAGAGTTaGTTCATGAAGAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: SAPLCTRTGIASWCLFITKAKQS*FMKSCI
Trigger: AATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTT...TGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGCATTCTTCTTTTGGATaGTTGCATTGCATCCCAGTA +
Preference number: 4 (lower is better)
Translates to: ENWNRFMVLIHNSHGYDGHSSFG*LHCIPV
Trigger: TACTGGGATGCAATGCAAGCATCCAAAAGAAGAATG...CCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTAGGCGTAAGCCACTGTaGCAGCCATGCACGTATTCT +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTRRKPL*QPCTYS
Trigger: AGAATACGTGCATGGCTGGCACAGTGGCTTACGCCT...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGCCAAAATCAGACTTCTaGACACCACCTGCCCACACA +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMPKSDF*TPPAHT
Trigger: TGTGTGGGCAGGTGGTGTGCAGAAGTCTGATTTTGG...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGTGGGCAGATGATTGGTaGAGACTCAGCTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALWADDW*RLSFLA
Trigger: TGCTAAGAAGCTGAGTCTCCACCAATCATCTGCCCA...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262547.9
CDS-3UTR CCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGTGCTGGGCAGATGATTaGTGGAGACTCAGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALCWADD*WRLSFL
Trigger: TAAGAAGCTGAGTCTCCACCAATCATCTGCCCAGCA...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262547.9
CDS-3UTR CCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGTCCTCCACCATAAGCTaGGATTTCCAATGGACTCTC +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALSSTIS*DFQWTL
Trigger: GAGAGTCCATTGGAAATCCCAGCTTATGGTGGAGGA...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000608192.5
CDS-3UTR CCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGACAGCCAAATATGGGTaGGACAGGAGAGCCACATTC +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMTAKYG*DRRATF
Trigger: GAATGTGGCTCTCCTGTCCCACCCATATTTGGCTGT...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTAGCTCCTTCTGGGGGTaGGAGACGACAGCCAAATAT +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTSSFWG*ETTAKY
Trigger: ATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCT...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACCACACACCACACAGATaGGAGTGTTCATGGGTACCA +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNHTPHR*ECSWVP
Trigger: TGGTACCCATGAACACTCCCATCTGTGTGGTGTGTG...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp TCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAACTGGAATCGCTTCATaGTGCTTATTCATAACAGCC +
Preference number: 4 (lower is better)
Translates to: SAPLCTRTGIASWCLFITTGIAS*CLFITA
Trigger: GGCTGTTATGAATAAGCACCATGAAGCGATTCCAGT...TGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGTCTCTGCACGAGAACTaGAATCGCTTCATGGTGCTT +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALSLHEN*NRFMVL
Trigger: AAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGA...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTTGCATCCCAGTAAAGTaGCGGTGCTCTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTCIPVK*RCSLFL
Trigger: CAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCA...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACAGCCTCTCGAGTAACTaGGATTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNSLSSN*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGTTACTCGAGAGGCT...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAGCGATGGCGCGATCTTaGCTCACTGTAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIAMARS*LTVTSA
Trigger: GGCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGC...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR CAA 72 bp AGTCTGTCTCCCTTTGAATTCTCATTATCTCCGTGCTaGTCAAACACTTCTGACCGCTTACGTGTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: SLSPFEFSLSPC*SNTSDRLRVQN
Trigger: GTTTTGCACACGTAAGCGGTCAGAAGTGTTTGACAAGCACGGAGATAATGAGAATTCAAAGGGAGACAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR TCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACCGTAATGGTATGATCTaGGGGACACACACTGAACCA +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNRNGMI*GTHTEP
Trigger: TGGTTCAGTGTGTGTCCCTCAGATCATACCATTACG...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGACACAGTATCTCAGGTaGGCAGGATTTCCTGTACCA +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMTQYLR*AGFPVP
Trigger: TGGTACAGGAAATCCTGCTCACCTGAGATACTGTGT...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACTCTGAGCATAACACCTaGGGTGAGCAGAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNSEHNT*GEQRCD
Trigger: ATCACATCTCTGCTCACCTCAGGTGTTATGCTCAGA...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGTCAGAAGGTGATCGCTaGAATTCACTGCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALSEGDR*NSLPCS
Trigger: TGAACAAGGCAGTGAATTTCAGCGATCACCTTCTGA...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAGCAGAGTTGCTTCATaGAGAGCTGTATTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALSRVAS*RAVFLS
Trigger: GCTCAGAAATACAGCTCTTCATGAAGCAACTCTGCT...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTCAGCAAAGAGTGAGGTaGCAAGGTCATCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTQQRVR*QGHLQC
Trigger: ACACTGGAGATGACCTTGTCACCTCACTCTTTGCTG...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATACTGAGGCTCCTAGTTTaGGCGAGTTGGTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGILRLLV*ASWSSS
Trigger: GCTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAG...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGCACGTATTCTTAAATaGAGTCCCGTGGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTARILK*SPVEAS
Trigger: TGAGGCCTCCACGGGACTTCATTTAAGAATACGTGC...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTTGGGTACCAAGCTTCTaGATTCTGCACACAAGCCCA +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTWVPSF*ILHTSP
Trigger: TGGGCTTGTGTGCAGAATGCAGAAGCTTGGTACCCA...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGTTTTTGCTAGCAGCTTaGCAGATGGGTAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMFLLAA*QMGRRG
Trigger: GCCTCTTCTACCCATCTGGCAAGCTGCTAGCAAAAA...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACTTTTTGCTAGCAGCTTaGCAGATGGGTAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNFLLAA*QMGRRG
Trigger: GCCTCTTCTACCCATCTGGCAAGCTGCTAGCAAAAA...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGGGAATCGCTTCATGGTaGTTATTCATAACAGCCACG +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALGIASW*LFITAT
Trigger: CGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTATGTCTGCTCCTCTCTaGACGAGAACTGGAATCGCT +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTMSAPL*TRTGIA
Trigger: AGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATACTGCTGGTCGATGTCTaGTCCTCTCTGCACGAGAAC +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGILLVDV*SSLHEN
Trigger: GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAGGTGCTCTCTCTTCCTaGAAGGCCAAGCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIGALSS*KAKQSC
Trigger: GCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACC...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp TCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACACATTCTTCTTTTGGATaGTTGCATTGCATCCCAGTA +
Preference number: 4 (lower is better)
Translates to: SAPLCTRTGIASWCLFITHSSFG*LHCIPV
Trigger: TACTGGGATGCAATGCAAGCATCCAAAAGAAGAATG...TGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATACAGAGCCAGGTCGTATaGTGTCTGGCCTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIQSQVV*CLASCI
Trigger: AATGCAGGAGGCCAGACAGCATACGACCTGGCTCTG...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATACTGACCGCTTACGTGTaGAAAACCGGGGGACTGGAA +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGILTAYV*KTGGLE
Trigger: TTCCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAG...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAAGGAGAGACTATATTTaGTGGTTCATAGTCTACGTG +
Preference number: 4 (lower is better)
Translates to: MSAPLCTRTGIASWCLFIRRDYI*WFIVYV
Trigger: CACGTAGACTATGAACCACCAAATATAGTCTCTCCT...TATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTCCAATGGACTCTCTaGAAACTTTCTAAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLFQWTL*KLSKVN
Trigger: GTTAACCTTAGAAAGTTTCCAGAGAGTCCATTGGAA...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTCACACACCACACAGATaGGAGTGTTCATGGGTACCA +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTHTPHR*ECSWVP
Trigger: TGGTACCCATGAACACTCCCATCTGTGTGGTGTGTG...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGGTCAGGAGGGGTTTATaGTCACTCATTTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMVRRGL*SLIFSC
Trigger: GCAGGAGAAAATGAGTGACCATAAACCCCTCCTGAC...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGTCACAACCATCTTCGTaGACAGTAGCAGAGATAAGC +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALSQPSS*TVAEIS
Trigger: GCTTATCTCTGCTACTGTCCACGAAGATGGTTGTGA...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACTCTCTGCACGAGAACTaGAATCGCTTCATGGTGCTT +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNSLHEN*NRFMVL
Trigger: AAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGA...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGCCTGCATTCTTCTTTTaGATGCTTGCATTGCATCCC +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALPAFFF*MLALHP
Trigger: GGGATGCAATGCAAGCATCCAAAAGAAGAATGCAGG...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACAGGTCGTATGCTGTCTaGCCTCCTGCATTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNRSYAV*PPAFFF
Trigger: AAAGAAGAATGCAGGAGGCCAGACAGCATACGACCT...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTAGCCTCTCGAGTAACTaGGATTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTSLSSN*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGTTACTCGAGAGGCT...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAGGCTGTGGGACAGAATaGGAGGGACGTATCCCTACA +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIGCGTE*EGRIPT
Trigger: TGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCC...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp ACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGATACAGAACAGTGTGTaGTTGGTTTGCTACCATTTG +
Preference number: 4 (lower is better)
Translates to: TRTGIASWCLFITATVMTIQNSV*LVCYHL
Trigger: CAAATGGTAGCAAACCAACCACACACTGTTCTGTAT...CGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp GCAGCTAGAGCCAGGCTTCTGTCCAAGCTAAGTTTCACTAGGGACTTCACACAAGGCAAATTAAACTCTTaGACAGCATACCTTACTAAA +
Preference number: 4 (lower is better)
Translates to: AARARLLSKLSFTRDFTQGKLNS*TAYLTK
Trigger: TTTAGTAAGGTATGCTGTCCAAGAGTTTAATTTGCC...TTGTGTGAAGTCCCTAGTGAAACTTAGCTTGGACAGAAGCCTGGCTCTAGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR TCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTTTAGCTTTTCCAGGCTaGGGCACTCGTAATGGTATG +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTLAFPG*GTRNGM
Trigger: CATACCATTACGAGTGCCTCAGCCTGGAAAAGCTAA...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp AAAAGCCTCCTAAATAATGTTCTCCCTTTCCTCTTCCATGGTCTAATCTCCATATTAGCTTTTCCAGGCTaGGGCACTCGTAATGGTATG +
Preference number: 4 (lower is better)
Translates to: KSLLNNVLPFLFHGLISILAFPG*GTRNGM
Trigger: CATACCATTACGAGTGCCTCAGCCTGGAAAAGCTAA...TATGGAGATTAGACCATGGAAGAGGAAAGGGAGAACATTATTTAGGAGGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR TCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGGACATCTGGAGTGTCTaGTTTCATTTCCAAAAGCGT +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALDIWSV*FHFQKR
Trigger: ACGCTTTTGGAAATGAAATCAGACACTCCAGATGTC...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp ACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGACATTCCAGCTGCGTTaGTTTTCAGAGTTCTTATAT +
Preference number: 4 (lower is better)
Translates to: TRTGIASWCLFITATVMTTFQLR*FSEFLY
Trigger: ATATAAGAACTCTGAAAATCAACGCAGCTGGAATGT...CGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp TCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAACATTCCAGCTGCGTTaGTTTTCAGAGTTCTTATAT +
Preference number: 4 (lower is better)
Translates to: SAPLCTRTGIASWCLFITTFQLR*FSEFLY
Trigger: ATATAAGAACTCTGAAAATCAACGCAGCTGGAATGT...TGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR TCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTACACAGTATCTCAGGTaGGCAGGATTTCCTGTACCA +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTTQYLR*AGFPVP
Trigger: TGGTACAGGAAATCCTGCTCACCTGAGATACTGTGT...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAAATCGGGCAGACAGGTaGTTGCTGGCCCCACATTTA +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGINRADR*LLAPHL
Trigger: TAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATT...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAGCACTGCTCAGAAGGTaGTCGCTGAAATTCACTGCC +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIALLRR*SLKFTA
Trigger: GGCAGTGAATTTCAGCGATCACCTTCTGAGCAGTGC...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACAGCAGAGTTGCTTCATaGAGAGCTGTATTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNSRVAS*RAVFLS
Trigger: GCTCAGAAATACAGCTCTTCATGAAGCAACTCTGCT...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATACTTGGCAGCAAAGAGTaGGGTGACAAGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGILGSKE*GDKVIS
Trigger: GGAGATGACCTTGTCACCTCACTCTTTGCTGCCAAG...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp ATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATATTTCCTCACCTTGTTTaGGACTTGACTATAATTCAG +
Preference number: 4 (lower is better)
Translates to: MSAPLCTRTGIASWCLFIFPHLV*DLTIIQ
Trigger: CTGAATTATAGTCAAGTCTCAAACAAGGTGAGGAAA...TATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR GCA 90 bp AACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGTTAGAAATTCAGGTTTaGTGCCATCCAGAGTATAAT +
Preference number: 4 (lower is better)
Translates to: NWNRFMVLIHNSHGYDGSLEIQV*CHPEYN
Trigger: ATTATACTCTGGATGGCAGCAAACCTGAATTTCTAA...CGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATTTAGAAATTCAGGTTTaGTGCCATCCAGAGTATAAT +
Preference number: 4 (lower is better)
Translates to: DVCSSLHENWNRFMVLIHLEIQV*CHPEYN
Trigger: ATTATACTCTGGATGGCAGCAAACCTGAATTTCTAA...ATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR GCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATATCCCATCCTGGGTTCTaGAATCAAGGCCCGGAATTC +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGISHPGF*NQGPEF
Trigger: GAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGA...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGGGAATCGCTTCATGGTaGTTATTCATAACAGCCACG +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMGIASW*LFITAT
Trigger: CGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAAGGCCAAGCAGAGTTaGTTCATGAAGAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALKAKQS*FMKSCI
Trigger: AATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTT...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTTGCTGTCTGGCCTCCTaGATTCTTCTTTTGGATGCT +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTCCLAS*ILLLDA
Trigger: AGCATCCAAAAGAAGAATGCAGGAGGCCAGACAGCA...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTTTCAAGCGATTTTCCTaGCTCAGCCTCTCGAGTAAC +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTFKRFS*LSLSSN
Trigger: GTTACTCGAGAGGCTGAGGCAGGAAAATCGCTTGAA...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp ACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGTTCCAATGGACTCTCTaGAAACTTTCTAAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: TRTGIASWCLFITATVMTFQWTL*KLSKVN
Trigger: GTTAACCTTAGAAAGTTTCCAGAGAGTCCATTGGAA...CGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAAGCTCCTTCTGGGGGTaGGAGACGACAGCCAAATAT +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGISSFWG*ETTAKY
Trigger: ATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCT...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACAGATGGGAGTGTTCATaGGTACCAAGCTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNRWECS*VPSFCI
Trigger: AATGCAGAAGCTTGGTACCCATGAACACTCCCATCT...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACTCCCAACATCAGATCTaGGCAAAGGAATATTCAGGG +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNSQHQI*AKEYSG
Trigger: CCCTGAATATTCCTTTGCCCAGATCTGATGTTGGGA...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATACTTCATCACAGCAGTTaGGGTCTGCTCCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGILHHSS*GLLPHP
Trigger: TGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAG...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGACTGGAATCGCTTCATaGTGCTTATTCATAACAGCC +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALTGIAS*CLFITA
Trigger: GGCTGTTATGAATAAGCACCATGAAGCGATTCCAGT...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTTCTCTGCACGAGAACTaGAATCGCTTCATGGTGCTT +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTSLHEN*NRFMVL
Trigger: AAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGA...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATATGCATCCCAGTAAAGTaGCGGTGCTCTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGICIPVK*RCSLFL
Trigger: CAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCA...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGCCTGCATTCTTCTTTTaGATGCTTGCATTGCATCCC +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMPAFFF*MLALHP
Trigger: GGGATGCAATGCAAGCATCCAAAAGAAGAATGCAGG...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACCCTGCATTCTTCTTTTaGATGCTTGCATTGCATCCC +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNPAFFF*MLALHP
Trigger: GGGATGCAATGCAAGCATCCAAAAGAAGAATGCAGG...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTAGGTCGTATGCTGTCTaGCCTCCTGCATTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTRSYAV*PPAFFF
Trigger: AAAGAAGAATGCAGGAGGCCAGACAGCATACGACCT...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATATGTGACCAAGACCTCTaGGTTGGCCGCCTTACTGTA +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGICDQDL*VGRLTV
Trigger: TACAGTAAGGCGGCCAACCCAGAGGTCTTGGTCACA...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CCA 90 bp GTTTTTACAGAATCACATTTCATTACCTTCAAGTGGAGGCTTGCCTGTGGCTGCAAACTGACTTTGGCCTaGCCAGTTATTCAAAATCTC +
Preference number: 4 (lower is better)
Translates to: VFTESHFITFKWRLACGCKLTLA*PVIQNL
Trigger: GAGATTTTGAATAACTGGCCAGGCCAAAGTCAGTTT...GCAGCCACAGGCAAGCCTCCACTTGAAGGTAATGAAATGTGATTCTGTAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR TCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATACTGAGGGACACACACTaGACCAGCAGTCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGILRDTH*TSSHFL
Trigger: GAGAAAATGACTGCTGGTTCAGTGTGTGTCCCTCAG...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAGCACTCGTAATGGTATaGTCTGAGGGACACACACTG +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIALVMV*SEGHTL
Trigger: CAGTGTGTGTCCCTCAGATCATACCATTACGAGTGC...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTTCAGAAGGTGATCGCTaGAATTCACTGCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTSEGDR*NSLPCS
Trigger: TGAACAAGGCAGTGAATTTCAGCGATCACCTTCTGA...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGTTTTTCAATAGTATCTaGGGTACTCTGGCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALFFNSI*GTLAVV
Trigger: GACTACAGCCAGAGTACCTCAGATACTATTGAAAAA...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTAGCAGAGTTGCTTCATaGAGAGCTGTATTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTSRVAS*RAVFLS
Trigger: GCTCAGAAATACAGCTCTTCATGAAGCAACTCTGCT...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR TCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATATGTAGATCCTTGCCTTaGTCACACTTGAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGICRSLP*SHLSPT
Trigger: GGTGGGACTCAAGTGTGATCAAGGCAAGGATCTACA...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR GCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGATCGCTGAAATTCACTaGCTTGTTCAGGTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALIAEIH*LVQVKV
Trigger: AACCTTTACCTGAACAAGGCAGTGAATTTCAGCGAT...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGGAATCGCTTCATGGTaGTTATTCATAACAGCCACG +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTGIASW*LFITAT
Trigger: CGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAATGTCTGCTCCTCTCTaGACGAGAACTGGAATCGCT +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIMSAPL*TRTGIA
Trigger: AGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACAAGGCCAAGCAGAGTTaGTTCATGAAGAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNKAKQS*FMKSCI
Trigger: AATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTT...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGAAGGCCAAGCAGAGTTaGTTCATGAAGAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMKAKQS*FMKSCI
Trigger: AATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTT...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp ATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAAGAGACTATATTTGGTaGTTCATAGTCTACGTGAAA +
Preference number: 4 (lower is better)
Translates to: MSAPLCTRTGIASWCLFIRDYIW*FIVYVK
Trigger: TTTCACGTAGACTATGAACCACCAAATATAGTCTCT...TATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAGGAGAGACTATATTTaGTGGTTCATAGTCTACGTG +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALRRDYI*WFIVYV
Trigger: CACGTAGACTATGAACCACCAAATATAGTCTCTCCT...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTTCCCAACATCAGATCTaGGCAAAGGAATATTCAGGG +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTSQHQI*AKEYSG
Trigger: CCCTGAATATTCCTTTGCCCAGATCTGATGTTGGGA...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTTCACAACCATCTTCGTaGACAGTAGCAGAGATAAGC +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTSQPSS*TVAEIS
Trigger: GCTTATCTCTGCTACTGTCCACGAAGATGGTTGTGA...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACACTGGAATCGCTTCATaGTGCTTATTCATAACAGCC +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNTGIAS*CLFITA
Trigger: GGCTGTTATGAATAAGCACCATGAAGCGATTCCAGT...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGATACAGAACAGTGTGTaGTTGGTTTGCTACCATTTG +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALIQNSV*LVCYHL
Trigger: CAAATGGTAGCAAACCAACCACACACTGTTCTGTAT...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGCTAGCATCAGGTTCATaGTCAAGCTTAAGTGAAACC +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMLASGS*SSLSET
Trigger: GGTTTCACTTAAGCTTGACCATGAACCTGATGCTAG...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR TCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATATCAGATGGATCTAATTaGCTCTTCACAGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGISDGSN*LFTVGR
Trigger: CCTCCCCACTGTGAAGAGTCAATTAGATCCATCTGA...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR TCA 90 bp TCTGAATACATTTTGCCCATATACAACCCACAAGGCCATTTTAGGAGTGTTATGTCAAAATCTCATTTCTaGAGGCTCACACAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SEYILPIYNPQGHFRSVMSKSHF*RLTQPC
Trigger: ACAAGGCTGTGTGAGCCTTCAGAAATGAGATTTTGA...CATAACACTCCTAAAATGGCCTTGTGGGTTGTATATGGGCAAAATGTATTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGTTCTCATTATCTCCGTaGTTGTCAAACACTTCTGAC +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMFSLSP*LSNTSD
Trigger: GTCAGAAGTGTTTGACAAGCACGGAGATAATGAGAA...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACTTCTCATTATCTCCGTaGTTGTCAAACACTTCTGAC +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNFSLSP*LSNTSD
Trigger: GTCAGAAGTGTTTGACAAGCACGGAGATAATGAGAA...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGCATTCTTCTTTTGGATaGTTGCATTGCATCCCAGTA +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMHSSFG*LHCIPV
Trigger: TACTGGGATGCAATGCAAGCATCCAAAAGAAGAATG...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACCATTCTTCTTTTGGATaGTTGCATTGCATCCCAGTA +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNHSSFG*LHCIPV
Trigger: TACTGGGATGCAATGCAAGCATCCAAAAGAAGAATG...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTAATCTTTCTTATCGATaGTCACACCCAGTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTNLSYR*SHPVPE
Trigger: TTCAGGCACTGGGTGTGAGCATCGATAAGAAAGATT...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATATCCTCCACCATAAGCTaGGATTTCCAATGGACTCTC +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGISSTIS*DFQWTL
Trigger: GAGAGTCCATTGGAAATCCCAGCTTATGGTGGAGGA...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTACTGGAATCGCTTCATaGTGCTTATTCATAACAGCC +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTTGIAS*CLFITA
Trigger: GGCTGTTATGAATAAGCACCATGAAGCGATTCCAGT...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATACTTTCTCCATGGACTTaGTCCCTCACACCTGATTCA +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGILSPWT*SLTPDS
Trigger: TGAATCAGGTGTGAGGGACCAAGTCCATGGAGAAAG...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
3UTR CAA 72 bp TTATTCAAAATCTCATTTCTGAAGGCTCACACAGCCTaGTACACTTGTGAACTCTTCATGCTAAAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LFKISFLKAHTA*YTCELFMLKGA
Trigger: AGCTCCCTTTAGCATGAAGAGTTCACAAGTGTACAAGGCTGTGTGAGCCTTCAGAAATGAGATTTTGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR TCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATACTTGTCAAACACTTCTaGCCGCTTACGTGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGILVKHF*PLTCAK
Trigger: TTTTGCACACGTAAGCGGTCAGAAGTGTTTGACAAG...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGTTAGAAATTCAGGTTTaGTGCCATCCAGAGTATAAT +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALLEIQV*CHPEYN
Trigger: ATTATACTCTGGATGGCAGCAAACCTGAATTTCTAA...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTATCGCTGAAATTCACTaGCTTGTTCAGGTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTIAEIH*LVQVKV
Trigger: AACCTTTACCTGAACAAGGCAGTGAATTTCAGCGAT...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGACAGACATGTTTATATaGTATGTGTACTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALTDMFI*YVYSSV
Trigger: TACAGAGGAGTACACATAGCATATAAACATGTCTGT...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATACCTGCATTCTTCTTTTaGATGCTTGCATTGCATCCC +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIPAFFF*MLALHP
Trigger: GGGATGCAATGCAAGCATCCAAAAGAAGAATGCAGG...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
3UTR CAA 72 bp TTCTCCACTATTCTCTCAGGATACAATCTTTTTCCATaGATAATGACCAGTGGTGCTCAAGTGTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: FSTILSGYNLFP*IMTSGAQVFLS
Trigger: AGAAAGGAACACTTGAGCACCACTGGTCATTATCAATGGAAAAAGATTGTATCCTGAGAGAATAGTGGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR TCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTACATTCCAGCTGCGTTaGTTTTCAGAGTTCTTATAT +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTTFQLR*FSEFLY
Trigger: ATATAAGAACTCTGAAAATCAACGCAGCTGGAATGT...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGTCATTTGTACAAAGTaGCCCCTGTTTCACTTTATT +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTVICTK*PLFHFI
Trigger: AATAAAGTGAAACAGGGGTCACTTTGTACAAATGAC...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGTTAGAAATTCAGGTTTaGTGCCATCCAGAGTATAAT +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMLEIQV*CHPEYN
Trigger: ATTATACTCTGGATGGCAGCAAACCTGAATTTCTAA...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR GCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAAAGGCCAAGCAGAGTTaGTTCATGAAGAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIKAKQS*FMKSCI
Trigger: AATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTT...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACTATACCACATGTATGTaGATATCTAACTCTGCACAA +
Preference number: 4 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNYTTCM*ISNSAQ
Trigger: TTGTGCAGAGTTAGATATGCACATACATGTGGTATA...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGACAGACATGTTTATATaGTATGTGTACTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMTDMFI*YVYSSV
Trigger: TACAGAGGAGTACACATAGCATATAAACATGTCTGT...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGGAAAGTGTCATGGTGTaGATTTCTTATTTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMESVMV*ISYLKE
Trigger: CTCTTTCAAATAAGAAATGCACACCATGACACTTTC...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CCA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGAGAGACTATATTTGGTaGTTCATAGTCTACGTGAAA +
Preference number: 4 (lower is better)
Translates to: IQFITVHSILGAVHLVLMRDYIW*FIVYVK
Trigger: TTTCACGTAGACTATGAACCACCAAATATAGTCTCT...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTTTCCAATGGACTCTCTaGAAACTTTCTAAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTFQWTL*KLSKVN
Trigger: GTTAACCTTAGAAAGTTTCCAGAGAGTCCATTGGAA...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000608192.5
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAACTGGAATCGCTTCATaGTGCTTATTCATAACAGCC +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGITGIAS*CLFITA
Trigger: GGCTGTTATGAATAAGCACCATGAAGCGATTCCAGT...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAATTGACTCTTCACAGTaGGGAGGCTTTGCAGATATT +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIIDSSQ*GGFADI
Trigger: AATATCTGCAAAGCCTCCCCACTGTGAAGAGTCAAT...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR TCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATATTTTTCAATAGTATCTaGGGTACTCTGGCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIFFNSI*GTLAVV
Trigger: GACTACAGCCAGAGTACCTCAGATACTATTGAAAAA...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp TCTGAATACATTTTGCCCATATACAACCCACAAGGCCATTTTAGGAGTGTTATGTTAGAAATTCAGGTTTaGTGCCATCCAGAGTATAAT +
Preference number: 4 (lower is better)
Translates to: SEYILPIYNPQGHFRSVMLEIQV*CHPEYN
Trigger: ATTATACTCTGGATGGCAGCAAACCTGAATTTCTAA...CATAACACTCCTAAAATGGCCTTGTGGGTTGTATATGGGCAAAATGTATTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR GCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAATCGCTGAAATTCACTaGCTTGTTCAGGTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIIAEIH*LVQVKV
Trigger: AACCTTTACCTGAACAAGGCAGTGAATTTCAGCGAT...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR GCA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTACAGACATGTTTATATaGTATGTGTACTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTTDMFI*YVYSSV
Trigger: TACAGAGGAGTACACATAGCATATAAACATGTCTGT...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAAGGAGAGACTATATTTaGTGGTTCATAGTCTACGTG +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIRRDYI*WFIVYV
Trigger: CACGTAGACTATGAACCACCAAATATAGTCTCTCCT...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR TCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAACATTCCAGCTGCGTTaGTTTTCAGAGTTCTTATAT +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGITFQLR*FSEFLY
Trigger: ATATAAGAACTCTGAAAATCAACGCAGCTGGAATGT...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATATTCCAATGGACTCTCTaGAAACTTTCTAAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIFQWTL*KLSKVN
Trigger: GTTAACCTTAGAAAGTTTCCAGAGAGTCCATTGGAA...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000608192.5
CDS-3UTR GCA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAGAAATTCAGGTTTGCTaGCATCCAGAGTATAATATA +
Preference number: 4 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIEIQVC*HPEYNI
Trigger: TATATTATACTCTGGATGGCAGCAAACCTGAATTTC...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS CCA 90 bp GACGCGGCGAGCCGCGCCCCGCCCACTGGGTGCTGGGCAGATGATTaGTGGAGACTCAGCTTCTTAGCAACTAGACCGGCCCCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: DAASRAPPTGCWADD*WRLSFLATRPAPAA
Trigger: AGCGGCAGGGGCCGGTCTAGTTGCTAAGAAGCTGAGTCTCCACCAATCATCTGCCCAGCACCCAGTGGGCGGGGCGCGGCTCGCCGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262547.9
ENST00000609267.5
CDS GCA 90 bp GCCCGGGTTACCACAGACGCGGCGAGCCGCGCCCCGCCCACTGGGTaGTGGGCAGATGATTGGTGGAGACTCAGCTTCTTAGCAACTAGA +
Preference number: 5 (lower is better)
Translates to: ARVTTDAASRAPPTG*WADDWWRLSFLATR
Trigger: TCTAGTTGCTAAGAAGCTGAGTCTCCACCAATCATCTGCCCAGCACCCAGTGGGCGGGGCGCGGCTCGCCGCGTCTGTGGTAACCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262547.9
ENST00000609267.5
CDS CCA 90 bp CGGGTTACCACAGACGCGGCGAGCCGCGCCCCGCCCACTGGGTGCTaGGCAGATGATTGGTGGAGACTCAGCTTCTTAGCAACTAGACCG +
Preference number: 5 (lower is better)
Translates to: RVTTDAASRAPPTGC*ADDWWRLSFLATRP
Trigger: CGGTCTAGTTGCTAAGAAGCTGAGTCTCCACCAATCATCTGCCCAGCACCCAGTGGGCGGGGCGCGGCTCGCCGCGTCTGTGGTAACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262547.9
ENST00000609267.5
CDS-3UTR CAA 90 bp GGCTCAGAAAAAGGGCGAGGTTCCTCAGCAGCTAGAGCCAGGCTTCTGTCCAAGTCTCTCTCTCGCCTCTaGCCTCCTCCTTCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: GSEKGRGSSAARARLLSKSLSRL*PPPSPP
Trigger: CGGCGGCGAAGGAGGAGGCAAGAGGCGAGAGAGAGA...CTTGGACAGAAGCCTGGCTCTAGCTGCTGAGGAACCTCGCCCTTTTTCTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377630.9
CDS-3UTR CAA 90 bp CGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTGCAGCAAAACGCCTCTaGCCTCCTCCTTCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: RVDCLHHSSWGLLPHPAAAAKRL*PPPSPP
Trigger: CGGCGGCGAAGGAGGAGGCAAGAGGCGTTTTGCTGC...AGCTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS TCA 90 bp AGGCACATCGGGGCTCTTGTGATGAAGGCAGGGCCCCCTCACAGGTaGCACAGTATCTCAGGTGAGCAGGATTTCCTGTACCACAGGCCC +
Preference number: 5 (lower is better)
Translates to: RHIGALVMKAGPPHR*HSISGEQDFLYHRP
Trigger: GGGCCTGTGGTACAGGAAATCCTGCTCACCTGAGATACTGTGTCACCTGTGAGGGGGCCCTGCCTTCATCACAAGAGCCCCGATGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470526.1
CDS-3UTR CAA 90 bp ACCAGCCGCAGAAGGACGCCTCCCAGAGATTCCAGCGACCACATCTGTAGCAGGGCTGAGGCTCCTAGTTaGAGCGAGTTGGTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: TSRRRTPPRDSSDHICSRAEAPS*SELVLK
Trigger: CTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAGC...CCTGCTACAGATGTGGTCGCTGGAATCTCTGGGAGGCGTCCTTCTGCGGCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS TCA 90 bp CAGGAATGCCGAGCTCTTGTGATGAAGGCAGGGCCCCCTCACAGGTaGCACAGTATCTCAGGTGAGCAGGATTTCCTGTACCACAGGCCC +
Preference number: 5 (lower is better)
Translates to: QECRALVMKAGPPHR*HSISGEQDFLYHRP
Trigger: GGGCCTGTGGTACAGGAAATCCTGCTCACCTGAGATACTGTGTCACCTGTGAGGGGGCCCTGCCTTCATCACAAGAGCTCGGCATTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329494.9
CDS TCA 90 bp CGAAGGCGGCCCCTGCCCAGTGTAGATCCTTGCCTTGATCACACTTaGGTCCCACCCATGCCTGCATCTACCAACCTCCTCTCTAGCATC +
Preference number: 5 (lower is better)
Translates to: RRRPLPSVDPCLDHT*VPPMPASTNLLSSI
Trigger: GATGCTAGAGAGGAGGTTGGTAGATGCAGGCATGGGTGGGACTCAAGTGTGATCAAGGCAAGGATCTACACTGGGCAGGGGCCGCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS CCA 90 bp GCAGGGAGCAGCACATGCAGGCAGGATGTTACAACTGTGGGAGTCTaGGTAACAACAGAGGGACCACCAAGTCCAGAGGGCAAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: AGSSTCRQDVTTVGV*VTTEGPPSPEGKGR
Trigger: CCTGCCTTTGCCCTCTGGACTTGGTGGTCCCTCTGTTGTTACCCAGACTCCCACAGTTGTAACATCCTGCCTGCATGTGCTGCTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CAA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGCCTTCAAGTGGAGGCTaGCCTGTGGCTGCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWPSSGG*PVAAAV
Trigger: TACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGG...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp ATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACAGCCCTTGGCCAAACTaGGCAGCAAAGAGTGAGGTG +
Preference number: 5 (lower is better)
Translates to: ISERPPLLVDVCSSLHENSPWPN*AAKSEV
Trigger: CACCTCACTCTTTGCTGCCAAGTTTGGCCAAGGGCT...GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp GCCACGGTTATGACGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTGCGATGGCGCGATCTaGGCTCACTGTAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: ATVMTGRLSSSQQLGSAPCDGAI*AHCNLC
Trigger: GCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGCA...GGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGAGCCCTTGGCCAAACTaGGCAGCAAAGAGTGAGGTG +
Preference number: 5 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWSPWPN*AAKSEV
Trigger: CACCTCACTCTTTGCTGCCAAGTTTGGCCAAGGGCT...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp TGTCTTCTCCAGTACCCTCTTCCTGGGCTGATGGCTGTCAGGAGGGGTTTATGGCCTAGTTTGAGCGAGTaGGTCCTCAAGCCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: CLLQYPLPGLMAVRRGLWPSLSE*VLKPLA
Trigger: GGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGG...CCATAAACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGGCTGAGGCTCCTAGTTaGAGCGAGTTGGTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWAEAPS*SELVLK
Trigger: CTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAGC...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp CTTTATCCCCACTGCACATCGACTCTTGTGATGAAGGCAGGGCCCCCTCACAGGGCTGAGGCTCCTAGTTaGAGCGAGTTGGTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: LYPHCTSTLVMKAGPPHRAEAPS*SELVLK
Trigger: CTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAGC...CCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp GAGGCTCCTAGTTTGAGCGAGTTGGTCCTCAAGCCCTTGGCCAAACTTGGCAGCATGAAGGAACCAGGCTaGTGCGTCCGATGGGCATTG +
Preference number: 5 (lower is better)
Translates to: EAPSLSELVLKPLAKLGSMKEPG*CVRWAL
Trigger: CAATGCCCATCGGACGCACAAGCCTGGTTCCTTCAT...GCTGCCAAGTTTGGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGGAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS TCA 90 bp TGCAAAACCGGGGGACTGGGACTGGCGGGTGGGTGGTCTAGAACCTaGTCCTCCACCATAAGCTGGGATTTCCAATGGACTCTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: CKTGGLGLAGGWSRT*SSTISWDFQWTLWK
Trigger: TTTCCAGAGAGTCCATTGGAAATCCCAGCTTATGGTGGAGGATCAGGTTCTAGACCACCCACCCGCCAGTCCCAGTCCCCCGGTTTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000609267.5
CDS TCA 90 bp GGGACTGTGTCTTGCCTGGGACTGGCGGGTGGGTGGTCTAGAACCTaGTCCTCCACCATAAGCTGGGATTTCCAATGGACTCTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: GTVSCLGLAGGWSRT*SSTISWDFQWTLWK
Trigger: TTTCCAGAGAGTCCATTGGAAATCCCAGCTTATGGTGGAGGATCAGGTTCTAGACCACCCACCCGCCAGTCCCAGGCAAGACACAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS CCA 90 bp CCAGCAGTCATTTTCTCTCTCTCTCTCTCTCTGCATCCTTTCGGCTaGAGTAAGGGAAGCTCTTCCCCTCCTCTAGCCGCCCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: PAVIFSLSLSLHPFG*SKGSSSPPLAALLF
Trigger: GAAGAGGAGGGCGGCTAGAGGAGGGGAAGAGCTTCCCTTACTCCAGCCGAAAGGATGCAGAGAGAGAGAGAGAGAGAAAATGACTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR CAA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGAGGAGAGCCACATTCTaGACAGAAGCGAGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWRRATF*TEASKG
Trigger: CCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCT...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp GTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTCCTTCCCTTCAAGTGGAGGCTaGCCTGTGGCTGCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: VGVCSLIQQLFNHRDSSFPSSGG*PVAAAV
Trigger: TACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGG...GAAGGAAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp CTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGGCTGAGGCTCCTAGTTaGAGCGAGTTGGTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: LLVDVCSSLHENWNRFMVAEAPS*SELVLK
Trigger: CTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAGC...CACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp GTGAGCAGAGATGTGATCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATTGCGATGGCGCGATCTaGGCTCACTGTAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: VSRDVIQLSSPVPSSWADCDGAI*AHCNLC
Trigger: GCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGCA...ATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGATCACATCTCTGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp ATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTCATTATCTCCGTGCTaGTCAAACACTTCTGACCGC +
Preference number: 5 (lower is better)
Translates to: ISERPPLLVDVCSSLHENSLSPC*SNTSDR
Trigger: GCGGTCAGAAGTGTTTGACAAGCACGGAGATAATGA...GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp CAAGCCCATCTGAGCTCCTTCTGGGGGTGGGAGACGACAGCCAAATATGGGTGGGTTCCTGTTCCTTTTTaGCTAGCAGCTTGCCAGATG +
Preference number: 5 (lower is better)
Translates to: QAHLSSFWGWETTAKYGWVPVPF*LAACQM
Trigger: CATCTGGCAAGCTGCTAGCAAAAAAGGAACAGGAAC...CCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCTCAGATGGGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR CAA 90 bp GTATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGACAAGGCCAAGCAGAGTaGCTTCATGAAGAGCTGTAT +
Preference number: 5 (lower is better)
Translates to: VFLSGPHCWSMSAPLCTRQGQAE*LHEELY
Trigger: ATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTTG...TCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp CAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTAGCCCTTGGCCAAACTaGGCAGCAAAGAGTGAGGTG +
Preference number: 5 (lower is better)
Translates to: QQLGSAPSSSSCSITETLSPWPN*AAKSEV
Trigger: CACCTCACTCTTTGCTGCCAAGTTTGGCCAAGGGCT...AAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAACTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp CCATCCTGGGTTCTGCAATCAAGGCCCGGAATTCAGGGTTGTTCTGAGCATAACCCTAGTTTGAGCGAGTaGGTCCTCAAGCCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: PSWVLQSRPGIQGCSEHNPSLSE*VLKPLA
Trigger: GGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGG...GTTATGCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp CCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCACTACGTGAAACACCTTaGTCACAATGCCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: PHCWSMSAPLCTRTGIASLRETP*SQCHSV
Trigger: GACAGAGTGGCATTGTGACAAAGGTGTTTCACGTAG...TGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp GGCTCAGAAAAAGGGCGAGGTTCCTCAGCAGCTAGAGCCAGGCTTCTGTCCAAGCTACGTGAAACACCTTaGTCACAATGCCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: GSEKGRGSSAARARLLSKLRETP*SQCHSV
Trigger: GACAGAGTGGCATTGTGACAAAGGTGTTTCACGTAG...CTTGGACAGAAGCCTGGCTCTAGCTGCTGAGGAACCTCGCCCTTTTTCTGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000460891.5
CDS-3UTR CAA 90 bp CGGGTCGATTGTCTTCATCACAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTCTACGTGAAACACCTTaGTCACAATGCCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: RVDCLHHSSWGLLPHPAALRETP*SQCHSV
Trigger: GACAGAGTGGCATTGTGACAAAGGTGTTTCACGTAG...AGCTGCTGGATGAGGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp AGCAGAGCAGGAAAGGGAAAGGAGCCAGGCAAGATGCAGTTTCAGGCAAAGTCCAGGCAGTGGGCACACTaGAGAAAGTCTGTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: SRAGKGKEPGKMQFQAKSRQWAH*RKSVSL
Trigger: AAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCT...GGACTTTGCCTGAAACTGCATCTTGCCTGGCTCCTTTCCCTTTCCTGCTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR CAA 90 bp GGCTCAGAAAAAGGGCGAGGTTCCTCAGCAGCTAGAGCCAGGCTTCTGTCCAAGGTTCCTGTTCCTTTTTaGCTAGCAGCTTGCCAGATG +
Preference number: 5 (lower is better)
Translates to: GSEKGRGSSAARARLLSKVPVPF*LAACQM
Trigger: CATCTGGCAAGCTGCTAGCAAAAAAGGAACAGGAAC...CTTGGACAGAAGCCTGGCTCTAGCTGCTGAGGAACCTCGCCCTTTTTCTGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000460891.5
CDS-3UTR CAA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGGTTATGACGGGTCGATaGTCTTCATCACAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWVMTGR*SSSQQL
Trigger: CAACTGCTGTGATGAAGACAATCGACCCGTCATAAC...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGTTTTGGATGCTTGCATaGCATCCCAGTAAAGTGGCG +
Preference number: 5 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWFWMLA*HPSKVA
Trigger: CGCCACTTTACTGGGATGCAATGCAAGCATCCAAAA...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp AGACAGGTGATTGCTGGCCCCACATTTAGGGCAAACAGAACAGCCAGCAGGAATAGCCCTTGGCCAAACTaGGCAGCAAAGAGTGAGGTG +
Preference number: 5 (lower is better)
Translates to: RQVIAGPTFRANRTASRNSPWPN*AAKSEV
Trigger: CACCTCACTCTTTGCTGCCAAGTTTGGCCAAGGGCT...ATTCCTGCTGGCTGTTCTGTTTGCCCTAAATGTGGGGCCAGCAATCACCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS GCA 90 bp ACAGAATCACATTTCATTACCTTCAAGTGGAGGCTTGCCTGTGGCTaGAGCTGTAGAGCAAGAGGGGCCTCACACACCACACAGATGGGA +
Preference number: 5 (lower is better)
Translates to: TESHFITFKWRLACG*SCRARGASHTTQMG
Trigger: TCCCATCTGTGTGGTGTGTGAGGCCCCTCTTGCTCTACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGGTAATGAAATGTGATTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS CCA 90 bp CCCTGTTTCACTTTATTCTGGAAACATGCAGCTTTGTATCTGGACTaGGCTGCTCAGCTGGCAGCACATCTGGATGTAGCCCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: PCFTLFWKHAALYLD*AAQLAAHLDVALTR
Trigger: CCTGGTGAGGGCTACATCCAGATGTGCTGCCAGCTGAGCAGCCCAGTCCAGATACAAAGCTGCATGTTTCCAGAATAAAGTGAAACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CAA 90 bp CTTGCATTGCATCCCAGTAAAGTGGCGGTGCTCTCTCTTCCTGCAAGGCCAAGCCTACGTGAAACACCTTaGTCACAATGCCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: LALHPSKVAVLSLPARPSLRETP*SQCHSV
Trigger: GACAGAGTGGCATTGTGACAAAGGTGTTTCACGTAG...GCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCAATGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp AGACAGGTGATTGCTGGCCCCACATTTAGGGCAAACAGAACAGCCAGCAGGAATAGGAGAGCCACATTCTaGACAGAAGCGAGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: RQVIAGPTFRANRTASRNRRATF*TEASKG
Trigger: CCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCT...ATTCCTGCTGGCTGTTCTGTTTGCCCTAAATGTGGGGCCAGCAATCACCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR CAA 90 bp CTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGTTTTGGATGCTTGCATaGCATCCCAGTAAAGTGGCG +
Preference number: 5 (lower is better)
Translates to: LLVDVCSSLHENWNRFMVFWMLA*HPSKVA
Trigger: CGCCACTTTACTGGGATGCAATGCAAGCATCCAAAA...CACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTCCTAGTTTGAGCGAGTaGGTCCTCAAGCCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLPSLSE*VLKPLA
Trigger: GGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGG...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp AACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGCCTAGTTTGAGCGAGTaGGTCCTCAAGCCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: NWNRFMVLIHNSHGYDGSPSLSE*VLKPLA
Trigger: GGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGG...CGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp AACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGTGCGATGGCGCGATCTaGGCTCACTGTAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: NWNRFMVLIHNSHGYDGSCDGAI*AHCNLC
Trigger: GCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGCA...CGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS TCA 90 bp CACTCTTCTCTCTGGACTTTCTCCATGGACTTGGTCCCTCACACCTaGTTCAAGCCTAAGCACTTGCTGACATATGTTGGCTTAGCCCCC +
Preference number: 5 (lower is better)
Translates to: HSSLWTFSMDLVPHT*FKPKHLLTYVGLAP
Trigger: GGGGGCTAAGCCAACATATGTCAGCAAGTGCTTAGGCTTGAATCAGGTGTGAGGGACCAAGTCCATGGAGAAAGTCCAGAGAGAAGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CAA 90 bp ACCACAGGAGCCACAGAATCGGGCAGACAGGTGATTGCTGGCCCCACATTTAGGCAGGAGAGACTATATTaGGTGGTTCATAGTCTACGT +
Preference number: 5 (lower is better)
Translates to: TTGATESGRQVIAGPTFRQERLY*VVHSLR
Trigger: ACGTAGACTATGAACCACCAAATATAGTCTCTCCTG...CCTAAATGTGGGGCCAGCAATCACCTGTCTGCCCGATTCTGTGGCTCCTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR CAA 90 bp CCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCACAGGAGAGACTATATTaGGTGGTTCATAGTCTACGT +
Preference number: 5 (lower is better)
Translates to: PHCWSMSAPLCTRTGIASQERLY*VVHSLR
Trigger: ACGTAGACTATGAACCACCAAATATAGTCTCTCCTG...TGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp GTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTCCTTCTCATTATCTCCGTGCTaGTCAAACACTTCTGACCGC +
Preference number: 5 (lower is better)
Translates to: VGVCSLIQQLFNHRDSSFSLSPC*SNTSDR
Trigger: GCGGTCAGAAGTGTTTGACAAGCACGGAGATAATGA...GAAGGAAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp GCAGCTAGAGCCAGGCTTCTGTCCAAGCTAAGTTTCACTAGGGACTTCACACAAAGGAGAGCCACATTCTaGACAGAAGCGAGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: AARARLLSKLSFTRDFTQRRATF*TEASKG
Trigger: CCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCT...TTGTGTGAAGTCCCTAGTGAAACTTAGCTTGGACAGAAGCCTGGCTCTAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR CAA 90 bp ACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGCCTTCAAGTGGAGGCTaGCCTGTGGCTGCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: TRTGIASWCLFITATVMTPSSGG*PVAAAV
Trigger: TACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGG...CGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp CAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTGTTATGACGGGTCGATaGTCTTCATCACAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: QQLGSAPSSSSCSITETLVMTGR*SSSQQL
Trigger: CAACTGCTGTGATGAAGACAATCGACCCGTCATAAC...AAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAACTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp AAGTGGCGGTGCTCTCTCTTCCTGCAAGGCCAAGCAGAGTTGCTTCATGAAGAGGTTATGACGGGTCGATaGTCTTCATCACAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: KWRCSLFLQGQAELLHEEVMTGR*SSSQQL
Trigger: CAACTGCTGTGATGAAGACAATCGACCCGTCATAAC...CTCTTCATGAAGCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTAGCCCTTGGCCAAACTaGGCAGCAAAGAGTGAGGTG +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLSPWPN*AAKSEV
Trigger: CACCTCACTCTTTGCTGCCAAGTTTGGCCAAGGGCT...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTGCTGAGGCTCCTAGTTaGAGCGAGTTGGTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLAEAPS*SELVLK
Trigger: CTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAGC...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp CCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGACTAACTTAGTGCCCTaGGAAGAAGCAGGTTGCTTA +
Preference number: 5 (lower is better)
Translates to: PLLVDVCSSLHENWNRFMTNLVP*EEAGCL
Trigger: TAAGCAACCTGCTTCTTCCAAGGGCACTAAGTTAGT...CATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS GCA 90 bp TTTCACTTTATTCTGGAAACATGCAGCTTTGTATCTGGACTGGGCTaGTCAGCTGGCAGCACATCTGGATGTAGCCCTCACCAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: FHFILETCSFVSGLG*SAGSTSGCSPHQVK
Trigger: CTTCACCTGGTGAGGGCTACATCCAGATGTGCTGCCAGCTGAGCAGCCCAGTCCAGATACAAAGCTGCATGTTTCCAGAATAAAGTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CAA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTTCTCTCTCTCGCCTCTaGCCTCCTCCTTCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTSLSRL*PPPSPP
Trigger: CGGCGGCGAAGGAGGAGGCAAGAGGCGAGAGAGAGA...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262547.9
ENST00000377630.9
CDS-3UTR CAA 90 bp CTCACAGGTGACACAGTATCTCAGGTGAGCAGGATTTCCTGTACCACAGGCCCGCAGGAGAGACTATATTaGGTGGTTCATAGTCTACGT +
Preference number: 5 (lower is better)
Translates to: LTGDTVSQVSRISCTTGPQERLY*VVHSLR
Trigger: ACGTAGACTATGAACCACCAAATATAGTCTCTCCTG...CGGGCCTGTGGTACAGGAAATCCTGCTCACCTGAGATACTGTGTCACCTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR CAA 90 bp ATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACAACATTCCAGCTGCGTaGATTTTCAGAGTTCTTATA +
Preference number: 5 (lower is better)
Translates to: ISERPPLLVDVCSSLHENNIPAA*IFRVLI
Trigger: TATAAGAACTCTGAAAATCAACGCAGCTGGAATGTT...GTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTAGGCAGTGGGCACACTaGAGAAAGTCTGTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLRQWAH*RKSVSL
Trigger: AAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCT...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp GCATTCTTCTTTTGGATGCTTGCATTGCATCCCAGTAAAGTGGCGGTGCTCTCTAGGCAGTGGGCACACTaGAGAAAGTCTGTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: AFFFWMLALHPSKVAVLSRQWAH*RKSVSL
Trigger: AAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCT...AGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTAGGAGAGCCACATTCTaGACAGAAGCGAGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLRRATF*TEASKG
Trigger: CCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCT...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp GAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGAGGAGAGCCACATTCTaGACAGAAGCGAGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: ENWNRFMVLIHNSHGYDGRRATF*TEASKG
Trigger: CCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCT...CCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp CAGGCCCGGCAAATTACCTTCTCCACTATTCTCTCAGGATACAATCTTTTTCCACCTTCAAGTGGAGGCTaGCCTGTGGCTGCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: QARQITFSTILSGYNLFPPSSGG*PVAAAV
Trigger: TACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGG...TGGAAAAAGATTGTATCCTGAGAGAATAGTGGAGAAGGTAATTTGCCGGGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR CAA 90 bp AGACAGGTGATTGCTGGCCCCACATTTAGGGCAAACAGAACAGCCAGCAGGAATGTTCCTGTTCCTTTTTaGCTAGCAGCTTGCCAGATG +
Preference number: 5 (lower is better)
Translates to: RQVIAGPTFRANRTASRNVPVPF*LAACQM
Trigger: CATCTGGCAAGCTGCTAGCAAAAAAGGAACAGGAAC...ATTCCTGCTGGCTGTTCTGTTTGCCCTAAATGTGGGGCCAGCAATCACCTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR CAA 90 bp CAGCAGTTGGGGTCTGCTCCCTCATCCAGCAGCTGTTCAATCACAGAGACTCTTTCCTGCATTCTTCTTTaGGATGCTTGCATTGCATCC +
Preference number: 5 (lower is better)
Translates to: QQLGSAPSSSSCSITETLSCILL*DACIAS
Trigger: GGATGCAATGCAAGCATCCAAAAGAAGAATGCAGGA...AAGAGTCTCTGTGATTGAACAGCTGCTGGATGAGGGAGCAGACCCCAACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp AAGGCCAAGCAGAGTTGCTTCATGAAGAGCTGTATTTCTGAGCGGCCCCCACTGTCCTGCATTCTTCTTTaGGATGCTTGCATTGCATCC +
Preference number: 5 (lower is better)
Translates to: KAKQSCFMKSCISERPPLSCILL*DACIAS
Trigger: GGATGCAATGCAAGCATCCAAAAGAAGAATGCAGGA...CAGTGGGGGCCGCTCAGAAATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp AGACAGGTGATTGCTGGCCCCACATTTAGGGCAAACAGAACAGCCAGCAGGAATAAGGCTCACACAGCCTaGTACACTTGTGAACTCTTC +
Preference number: 5 (lower is better)
Translates to: RQVIAGPTFRANRTASRNKAHTA*YTCELF
Trigger: GAAGAGTTCACAAGTGTACAAGGCTGTGTGAGCCTT...ATTCCTGCTGGCTGTTCTGTTTGCCCTAAATGTGGGGCCAGCAATCACCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR CAA 90 bp AGACAGGTGATTGCTGGCCCCACATTTAGGGCAAACAGAACAGCCAGCAGGAATGTCCTGAAACTGACTTaGGCCTGGCCAGTTATTCAA +
Preference number: 5 (lower is better)
Translates to: RQVIAGPTFRANRTASRNVLKLT*AWPVIQ
Trigger: TTGAATAACTGGCCAGGCCAAAGTCAGTTTCAGGAC...ATTCCTGCTGGCTGTTCTGTTTGCCCTAAATGTGGGGCCAGCAATCACCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR CAA 90 bp GTATTTCTGAGCGGCCCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAGTTTCCTCACCTTGTTaGAGACTTGACTATAATTCA +
Preference number: 5 (lower is better)
Translates to: VFLSGPHCWSMSAPLCTRVSSPC*RLDYNS
Trigger: TGAATTATAGTCAAGTCTCAAACAAGGTGAGGAAAC...TCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR CAA 90 bp CCCCACTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCAAAGTCCTTCAATGTCTaGGAATTAGGGTGTCATGAT +
Preference number: 5 (lower is better)
Translates to: PHCWSMSAPLCTRTGIASKSFNV*ELGCHD
Trigger: ATCATGACACCCTAATTCCAAGACATTGAAGGACTT...TGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR CAA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGAGCAATAGCTTTAACTaGTATTTTTCCATCAGGCAG +
Preference number: 5 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWSNSFN*YFSIRQ
Trigger: CTGCCTGATGGAAAAATACAAGTTAAAGCTATTGCT...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp TCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAAGGCAGTGGGCACACTaGAGAAAGTCTGTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: SAPLCTRTGIASWCLFITRQWAH*RKSVSL
Trigger: AAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCT...TGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp GCAGCTAGAGCCAGGCTTCTGTCCAAGCTAAGTTTCACTAGGGACTTCACACAATTTTGGATGCTTGCATaGCATCCCAGTAAAGTGGCG +
Preference number: 5 (lower is better)
Translates to: AARARLLSKLSFTRDFTQFWMLA*HPSKVA
Trigger: CGCCACTTTACTGGGATGCAATGCAAGCATCCAAAA...TTGTGTGAAGTCCCTAGTGAAACTTAGCTTGGACAGAAGCCTGGCTCTAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGCCTAGTTTGAGCGAGTaGGTCCTCAAGCCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALPSLSE*VLKPLA
Trigger: GGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGG...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGTGCGATGGCGCGATCTaGGCTCACTGTAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALCDGAI*AHCNLC
Trigger: GCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGCA...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp ACGCTGATGTCATTGCTGGCTGAGGAGAGAGGTGGTGGCTGTGGGACAGAATGGTTATTGAGAGCTGATTaGTCAATCAAAGAACACACC +
Preference number: 5 (lower is better)
Translates to: TLMSLLAEERGGGCGTEWLLRAD*SIKEHT
Trigger: GGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAA...CCATTCTGTCCCACAGCCACCACCTCTCTCCTCAGCCAGCAATGACATCAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS TCA 90 bp ATTTCTCTGCTTAAAGTCCTTCAATGTCTTGGAATTAGGGTGTCATaGTGGGAAGGTCTCAGGCTGCCAAGTGTGAATCCTGGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: ISLLKVLQCLGIRVS*WEGLRLPSVNPGSA
Trigger: GGCAGACCCAGGATTCACACTTGGCAGCCTGAGACCTTCCCATCATGACACCCTAATTCCAAGACATTGAAGGACTTTAAGCAGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS CCA 90 bp CACCCATGCCTGCATCTACCAACCTCCTCTCTAGCATCAGGTTCATaGTCAAGCTTAAGTGAAACCCCTATAAACTTCCTCTGTCAATCC +
Preference number: 5 (lower is better)
Translates to: HPCLHLPTSSLASGS*SSLSETPINFLCQS
Trigger: GGATTGACAGAGGAAGTTTATAGGGGTTTCACTTAAGCTTGACCATGAACCTGATGCTAGAGAGGAGGTTGGTAGATGCAGGCATGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CAA 90 bp CTGCTGGTCGATGTCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGAGCAATAGCTTTAACTaGTATTTTTCCATCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LLVDVCSSLHENWNRFMVSNSFN*YFSIRQ
Trigger: CTGCCTGATGGAAAAATACAAGTTAAAGCTATTGCT...CACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTCTACGTGAAACACCTTaGTCACAATGCCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLLRETP*SQCHSV
Trigger: GACAGAGTGGCATTGTGACAAAGGTGTTTCACGTAG...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp CTCACAGGTGACACAGTATCTCAGGTGAGCAGGATTTCCTGTACCACAGGCCCGAACATTCCAGCTGCGTaGATTTTCAGAGTTCTTATA +
Preference number: 5 (lower is better)
Translates to: LTGDTVSQVSRISCTTGPNIPAA*IFRVLI
Trigger: TATAAGAACTCTGAAAATCAACGCAGCTGGAATGTT...CGGGCCTGTGGTACAGGAAATCCTGCTCACCTGAGATACTGTGTCACCTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTCATTATCTCCGTGCTaGTCAAACACTTCTGACCGC +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLSLSPC*SNTSDR
Trigger: GCGGTCAGAAGTGTTTGACAAGCACGGAGATAATGA...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp ACAGTCTGTGTTCCTATGTCCCTCTTAGTCCCAACATCAGATCTGGGCAAAGGATCATTATCTCCGTGCTaGTCAAACACTTCTGACCGC +
Preference number: 5 (lower is better)
Translates to: TVCVPMSLLVPTSDLGKGSLSPC*SNTSDR
Trigger: GCGGTCAGAAGTGTTTGACAAGCACGGAGATAATGA...TCCTTTGCCCAGATCTGATGTTGGGACTAAGAGGGACATAGGAACACAGACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR CAA 90 bp CAGGCCCGGCAAATTACCTTCTCCACTATTCTCTCAGGATACAATCTTTTTCCAAGGAGAGCCACATTCTaGACAGAAGCGAGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: QARQITFSTILSGYNLFPRRATF*TEASKG
Trigger: CCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCT...TGGAAAAAGATTGTATCCTGAGAGAATAGTGGAGAAGGTAATTTGCCGGGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTGTTCCTGTTCCTTTTTaGCTAGCAGCTTGCCAGATG +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLVPVPF*LAACQM
Trigger: CATCTGGCAAGCTGCTAGCAAAAAAGGAACAGGAAC...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp GGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTGGTTCCTGTTCCTTTTTaGCTAGCAGCTTGCCAGATG +
Preference number: 5 (lower is better)
Translates to: GIASWCLFITATVMTGRLVPVPF*LAACQM
Trigger: CATCTGGCAAGCTGCTAGCAAAAAAGGAACAGGAAC...CAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTCAAGGCCAAGCAGAGTaGCTTCATGAAGAGCTGTAT +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLQGQAE*LHEELY
Trigger: ATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTTG...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTTTGGATGCTTGCATaGCATCCCAGTAAAGTGGCG +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLFWMLA*HPSKVA
Trigger: CGCCACTTTACTGGGATGCAATGCAAGCATCCAAAA...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp GGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTGTTTTGGATGCTTGCATaGCATCCCAGTAAAGTGGCG +
Preference number: 5 (lower is better)
Translates to: GIASWCLFITATVMTGRLFWMLA*HPSKVA
Trigger: CGCCACTTTACTGGGATGCAATGCAAGCATCCAAAA...CAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGCCTAGTTTGAGCGAGTaGGTCCTCAAGCCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: IQFITVHSILGAVHLVLMPSLSE*VLKPLA
Trigger: GGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGG...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACTGCGATGGCGCGATCTaGGCTCACTGTAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNCDGAI*AHCNLC
Trigger: GCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGCA...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp TCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACCTTGGAAGAAGCAGGTaGCTTAACTTCTCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: SSLHENWNRFMVLIHNSHLGRSR*LNFSEP
Trigger: AGGCTCAGAGAAGTTAAGCAACCTGCTTCTTCCAAG...GTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS TCA 90 bp ACCCAGTGCCTGAAGCGTCACACATCCTTCTCAGATGGATCTAATTaGCTCTTCACAGTGGGGAGGCTTTGCAGATATTTGGGAATAAAG +
Preference number: 5 (lower is better)
Translates to: TQCLKRHTSFSDGSN*LFTVGRLCRYLGIK
Trigger: CTTTATTCCCAAATATCTGCAAAGCCTCCCCACTGTGAAGAGTCAATTAGATCCATCTGAGAAGGATGTGTGACGCTTCAGGCACTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CAA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAGGAGAGCCACATTCTaGACAGAAGCGAGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALRRATF*TEASKG
Trigger: CCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCT...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTCCTTCAAGTGGAGGCTaGCCTGTGGCTGCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTPSSGG*PVAAAV
Trigger: TACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGG...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp TGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTGTTATGACGGGTCGATaGTCTTCATCACAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: WNRFMVLIHNSHGYDGSIVMTGR*SSSQQL
Trigger: CAACTGCTGTGATGAAGACAATCGACCCGTCATAAC...AATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTCCTGCATTCTTCTTTaGGATGCTTGCATTGCATCC +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLSCILL*DACIAS
Trigger: GGATGCAATGCAAGCATCCAAAAGAAGAATGCAGGA...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACAGCCCTTGGCCAAACTaGGCAGCAAAGAGTGAGGTG +
Preference number: 5 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNSPWPN*AAKSEV
Trigger: CACCTCACTCTTTGCTGCCAAGTTTGGCCAAGGGCT...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp GTGAGCAGAGATGTGATCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATTTATTGAGAGCTGATTaGTCAATCAAAGAACACACC +
Preference number: 5 (lower is better)
Translates to: VSRDVIQLSSPVPSSWADLLRAD*SIKEHT
Trigger: GGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAA...ATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGATCACATCTCTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp GTGAGCAGAGATGTGATCCAGCTGTCTTCTCCAGTACCCTCTTCCTGGGCTGATTTCTCTGAATACATTTaGCCCATATACAACCCACAA +
Preference number: 5 (lower is better)
Translates to: VSRDVIQLSSPVPSSWADFSEYI*PIYNPQ
Trigger: TTGTGGGTTGTATATGGGCAAAATGTATTCAGAGAA...ATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGATCACATCTCTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS TCA 90 bp TCTACCAACCTCCTCTCTAGCATCAGGTTCATGGTCAAGCTTAAGTaGAACCCCTATAAACTTCCTCTGTCAATCCCAACAACATCCCTG +
Preference number: 5 (lower is better)
Translates to: STNLLSSIRFMVKLK*NPYKLPLSIPTTSL
Trigger: CAGGGATGTTGTTGGGATTGACAGAGGAAGTTTATAGGGGTTTCACTTAAGCTTGACCATGAACCTGATGCTAGAGAGGAGGTTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTCAGGAGAGACTATATTaGGTGGTTCATAGTCTACGT +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLQERLY*VVHSLR
Trigger: ACGTAGACTATGAACCACCAAATATAGTCTCTCCTG...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp AGACAGGTGATTGCTGGCCCCACATTTAGGGCAAACAGAACAGCCAGCAGGAATAACATTCCAGCTGCGTaGATTTTCAGAGTTCTTATA +
Preference number: 5 (lower is better)
Translates to: RQVIAGPTFRANRTASRNNIPAA*IFRVLI
Trigger: TATAAGAACTCTGAAAATCAACGCAGCTGGAATGTT...ATTCCTGCTGGCTGTTCTGTTTGCCCTAAATGTGGGGCCAGCAATCACCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
CDS-3UTR CAA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGAGGCAGTGGGCACACTaGAGAAAGTCTGTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: IQFITVHSILGAVHLVLMRQWAH*RKSVSL
Trigger: AAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCT...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTCTTCTTTTGGATGCTaGCATTGCATCCCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLSSFGC*HCIPVK
Trigger: CTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGA...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp TCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACATCCTGCATTCTTCTTTaGGATGCTTGCATTGCATCC +
Preference number: 5 (lower is better)
Translates to: SAPLCTRTGIASWCLFITSCILL*DACIAS
Trigger: GGATGCAATGCAAGCATCCAAAAGAAGAATGCAGGA...TGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGCTGAGGCTCCTAGTTaGAGCGAGTTGGTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTAEAPS*SELVLK
Trigger: CTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAGC...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp GAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGCAGAACAGTGTGTGGTaGGTTTGCTACCATTTGTTT +
Preference number: 5 (lower is better)
Translates to: ENWNRFMVLIHNSHGYDGQNSVW*VCYHLF
Trigger: AAACAAATGGTAGCAAACCAACCACACACTGTTCTG...CCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTCAGAACAGTGTGTGGTaGGTTTGCTACCATTTGTTT +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLQNSVW*VCYHLF
Trigger: AAACAAATGGTAGCAAACCAACCACACACTGTTCTG...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS CCA 90 bp AGTTTATGGTCATTTGTACAAAGTGACCCCTGTTTCACTTTATTCTaGAAACATGCAGCTTTGTATCTGGACTGGGCTGCTCAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SLWSFVQSDPCFTLF*KHAALYLDWAAQLA
Trigger: TGCCAGCTGAGCAGCCCAGTCCAGATACAAAGCTGCATGTTTCCAGAATAAAGTGAAACAGGGGTCACTTTGTACAAATGACCATAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS CCA 90 bp TATTTCATTCATGTTTTTACAGAATCACATTTCATTACCTTCAAGTaGAGGCTTGCCTGTGGCTGCAGCTGTAGAGCAAGAGGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: YFIHVFTESHFITFK*RLACGCSCRARGAS
Trigger: TGAGGCCCCTCTTGCTCTACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGGTAATGAAATGTGATTCTGTAAAAACATGAATGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR CAA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGCTACGTGAAACACCTTaGTCACAATGCCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALLRETP*SQCHSV
Trigger: GACAGAGTGGCATTGTGACAAAGGTGTTTCACGTAG...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTAGGCAGTGGGCACACTaGAGAAAGTCTGTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTRQWAH*RKSVSL
Trigger: AAGGGAGACAGACTTTCTCAAGTGTGCCCACTGCCT...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGGTTATGACGGGTCGATaGTCTTCATCACAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALVMTGR*SSSQQL
Trigger: CAACTGCTGTGATGAAGACAATCGACCCGTCATAAC...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGTTTTGGATGCTTGCATaGCATCCCAGTAAAGTGGCG +
Preference number: 5 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALFWMLA*HPSKVA
Trigger: CGCCACTTTACTGGGATGCAATGCAAGCATCCAAAA...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp TGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTTCTTCTTTTGGATGCTaGCATTGCATCCCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: WNRFMVLIHNSHGYDGSISSFGC*HCIPVK
Trigger: CTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGA...AATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp CTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATTCTTCTTTTGGATGCTaGCATTGCATCCCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: LHENWNRFMVLIHNSHGYSSFGC*HCIPVK
Trigger: CTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGA...ATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp GCAGCTAGAGCCAGGCTTCTGTCCAAGCTAAGTTTCACTAGGGACTTCACACAATACAATCTTTTTCCATaGATAATGACCAGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: AARARLLSKLSFTRDFTQYNLFP*IMTSGA
Trigger: AGCACCACTGGTCATTATCAATGGAAAAAGATTGTA...TTGTGTGAAGTCCCTAGTGAAACTTAGCTTGGACAGAAGCCTGGCTCTAGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS-3UTR CAA 90 bp TCTGCTCCTCTCTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACATATTCCTTCACAGAGTaGCCAAGTGCTAAAAGTTGG +
Preference number: 5 (lower is better)
Translates to: SAPLCTRTGIASWCLFITYSFTE*PSAKSW
Trigger: CCAACTTTTAGCACTTGGCAACTCTGTGAAGGAATA...TGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTAACATTCCAGCTGCGTaGATTTTCAGAGTTCTTATA +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLNIPAA*IFRVLI
Trigger: TATAAGAACTCTGAAAATCAACGCAGCTGGAATGTT...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACGTTATGACGGGTCGATaGTCTTCATCACAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNVMTGR*SSSQQL
Trigger: CAACTGCTGTGATGAAGACAATCGACCCGTCATAAC...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGGTTATGACGGGTCGATaGTCTTCATCACAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: IQFITVHSILGAVHLVLMVMTGR*SSSQQL
Trigger: CAACTGCTGTGATGAAGACAATCGACCCGTCATAAC...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGCAAGGCCAAGCAGAGTaGCTTCATGAAGAGCTGTAT +
Preference number: 5 (lower is better)
Translates to: IQFITVHSILGAVHLVLMQGQAE*LHEELY
Trigger: ATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTTG...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTCAGTGTGTGGTTGGTTaGCTACCATTTGTTTTAAAA +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLQCVVG*LPFVLK
Trigger: TTTTAAAACAAATGGTAGCAAACCAACCACACACTG...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp GTGGCTGTGGGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTATTGAGAGCTGATTaGTCAATCAAAGAACACACC +
Preference number: 5 (lower is better)
Translates to: VAVGQNGRDVSLHNTSYLLLRAD*SIKEHT
Trigger: GGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAA...AAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGCACAGTGGGGAGGCTTaGCAGATATTTGGGAATAAA +
Preference number: 5 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALHSGEA*QIFGNK
Trigger: TTTATTCCCAAATATCTGCAAAGCCTCCCCACTGTG...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CAA 90 bp CTGCACGAGAACTGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATAACATTCCAGCTGCGTaGATTTTCAGAGTTCTTATA +
Preference number: 5 (lower is better)
Translates to: LHENWNRFMVLIHNSHGYNIPAA*IFRVLI
Trigger: TATAAGAACTCTGAAAATCAACGCAGCTGGAATGTT...ATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCAGTTCTCGTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377630.9
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTTCATTATCTCCGTGCTaGTCAAACACTTCTGACCGC +
Preference number: 5 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTSLSPC*SNTSDR
Trigger: GCGGTCAGAAGTGTTTGACAAGCACGGAGATAATGA...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGTTCCTGTTCCTTTTTaGCTAGCAGCTTGCCAGATG +
Preference number: 5 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTVPVPF*LAACQM
Trigger: CATCTGGCAAGCTGCTAGCAAAAAAGGAACAGGAAC...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTTTTTGGATGCTTGCATaGCATCCCAGTAAAGTGGCG +
Preference number: 5 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTFWMLA*HPSKVA
Trigger: CGCCACTTTACTGGGATGCAATGCAAGCATCCAAAA...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp GGACAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGTCTTCTTTTGGATGCTaGCATTGCATCCCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: GQNGRDVSLHNTSYLLALSSFGC*HCIPVK
Trigger: CTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGA...CAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACTCCTGCATTCTTCTTTaGGATGCTTGCATTGCATCC +
Preference number: 5 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNSCILL*DACIAS
Trigger: GGATGCAATGCAAGCATCCAAAAGAAGAATGCAGGA...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp TGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTCAGTGTGTGGTTGGTTaGCTACCATTTGTTTTAAAA +
Preference number: 5 (lower is better)
Translates to: WNRFMVLIHNSHGYDGSIQCVVG*LPFVLK
Trigger: TTTTAAAACAAATGGTAGCAAACCAACCACACACTG...AATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp TGGAATCGCTTCATGGTGCTTATTCATAACAGCCACGGTTATGACGGGTCGATTTTATTGAGAGCTGATTaGTCAATCAAAGAACACACC +
Preference number: 5 (lower is better)
Translates to: WNRFMVLIHNSHGYDGSILLRAD*SIKEHT
Trigger: GGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAA...AATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATGAAGCGATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACCAGGAGAGACTATATTaGGTGGTTCATAGTCTACGT +
Preference number: 5 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNQERLY*VVHSLR
Trigger: ACGTAGACTATGAACCACCAAATATAGTCTCTCCTG...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGTCTTCTTTTGGATGCTaGCATTGCATCCCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: IQFITVHSILGAVHLVLMSSFGC*HCIPVK
Trigger: CTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGA...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTTCCTGCATTCTTCTTTaGGATGCTTGCATTGCATCC +
Preference number: 5 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTSCILL*DACIAS
Trigger: GGATGCAATGCAAGCATCCAAAAGAAGAATGCAGGA...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGCAGAACAGTGTGTGGTaGGTTTGCTACCATTTGTTT +
Preference number: 5 (lower is better)
Translates to: IQFITVHSILGAVHLVLMQNSVW*VCYHLF
Trigger: AAACAAATGGTAGCAAACCAACCACACACTGTTCTG...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATATGGAAACATGCAGCTTaGTATCTGGACTGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIWKHAA*YLDWAA
Trigger: AGCAGCCCAGTCCAGATACAAAGCTGCATGTTTCCA...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CAA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATAGTTCCTGTTCCTTTTTaGCTAGCAGCTTGCCAGATG +
Preference number: 5 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIVPVPF*LAACQM
Trigger: CATCTGGCAAGCTGCTAGCAAAAAAGGAACAGGAAC...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATACAAGGCCAAGCAGAGTaGCTTCATGAAGAGCTGTAT +
Preference number: 5 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIQGQAE*LHEELY
Trigger: ATACAGCTCTTCATGAAGCAACTCTGCTTGGCCTTG...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp ATACATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTCAGAACAGTGTGTGGTaGGTTTGCTACCATTTGTTT +
Preference number: 5 (lower is better)
Translates to: IHSVYHSPQYTGSCPFSTQNSVW*VCYHLF
Trigger: AAACAAATGGTAGCAAACCAACCACACACTGTTCTG...AGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGAGAGTTTATGGTCATTaGTACAAAGTGACCCCTGTT +
Preference number: 5 (lower is better)
Translates to: IQFITVHSILGAVHLVLMRVYGH*YKVTPV
Trigger: AACAGGGGTCACTTTGTACAAATGACCATAAACTCT...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS CCA 90 bp TTTGAGAACATTTTCAACATTGTCTTCAGGAGAGACTATATTTGGTaGTTCATAGTCTACGTGAAACACCTTTGTCACAATGCCACTCTG +
Preference number: 5 (lower is better)
Translates to: FENIFNIVFRRDYIW*FIVYVKHLCHNATL
Trigger: CAGAGTGGCATTGTGACAAAGGTGTTTCACGTAGACTATGAACCACCAAATATAGTCTCTCCTGAAGACAATGTTGAAAATGTTCTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
ENST00000609267.5
CDS-3UTR CAA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACAGCAATAGCTTTAACTaGTATTTTTCCATCAGGCAG +
Preference number: 5 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNSNSFN*YFSIRQ
Trigger: CTGCCTGATGGAAAAATACAAGTTAAAGCTATTGCT...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGAACATTCCAGCTGCGTaGATTTTCAGAGTTCTTATA +
Preference number: 5 (lower is better)
Translates to: IQFITVHSILGAVHLVLMNIPAA*IFRVLI
Trigger: TATAAGAACTCTGAAAATCAACGCAGCTGGAATGTT...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000608192.5
CDS-3UTR CAA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGCAGTGTGTGGTTGGTTaGCTACCATTTGTTTTAAAA +
Preference number: 5 (lower is better)
Translates to: IQFITVHSILGAVHLVLMQCVVG*LPFVLK
Trigger: TTTTAAAACAAATGGTAGCAAACCAACCACACACTG...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp CAGAATGGGAGGGACGTATCCCTACATAATACTTCATACCTTTTAGCTTTGAACTTATTGAGAGCTGATTaGTCAATCAAAGAACACACC +
Preference number: 5 (lower is better)
Translates to: QNGRDVSLHNTSYLLALNLLRAD*SIKEHT
Trigger: GGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAA...GTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGTTATTGAGAGCTGATTaGTCAATCAAAGAACACACC +
Preference number: 5 (lower is better)
Translates to: IQFITVHSILGAVHLVLMLLRAD*SIKEHT
Trigger: GGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAA...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp ATTCAGTTTATCACAGTCCACAGTATACTGGGAGCTGTCCATTTAGTACTGATGCTAGGAATGAAGAGATaGCATATCAATCACTTGGTT +
Preference number: 5 (lower is better)
Translates to: IQFITVHSILGAVHLVLMLGMKR*HINHLV
Trigger: AACCAAGTGATTGATATGCAATCTCTTCATTCCTAG...CATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS TCA 90 bp CTAGGAATGAAGAGATTGCATATCAATCACTTGGTTATTCCCATGTaGGAATTAAAGCTGCATGATAGAGAAAGTGTCATGGTGTGCATT +
Preference number: 5 (lower is better)
Translates to: LGMKRLHINHLVIPM*ELKLHDRESVMVCI
Trigger: AATGCACACCATGACACTTTCTCTATCATGCAGCTTTAATTCTCACATGGGAATAACCAAGTGATTGATATGCAATCTCTTCATTCCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS-3UTR CAA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATATCTTCTTTTGGATGCTaGCATTGCATCCCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: GLLRADLSIKEHTIMMGISSFGC*HCIPVK
Trigger: CTTTACTGGGATGCAATGCAAGCATCCAAAAGAAGA...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000377630.9
ENST00000476058.5
ENST00000608192.5
CDS-3UTR CAA 90 bp AAAAGCCTCCTAAATAATGTTCTCCCTTTCCTCTTCCATGGTCTAATCTCCATACAGTGTGTGGTTGGTTaGCTACCATTTGTTTTAAAA +
Preference number: 5 (lower is better)
Translates to: KSLLNNVLPFLFHGLISIQCVVG*LPFVLK
Trigger: TTTTAAAACAAATGGTAGCAAACCAACCACACACTG...TATGGAGATTAGACCATGGAAGAGGAAAGGGAGAACATTATTTAGGAGGCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS-3UTR CAA 90 bp GGTTTATTGAGAGCTGATTTGTCAATCAAAGAACACACCATAATGATGGGAATATTCAAGCCTAAGCACTaGCTGACATATGTTGGCTTA +
Preference number: 5 (lower is better)
Translates to: GLLRADLSIKEHTIMMGIFKPKH*LTYVGL
Trigger: TAAGCCAACATATGTCAGCAAGTGCTTAGGCTTGAA...TATTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS TCA 90 bp GTGTGCATTTCTTATTTGAAAGAGTTTATGGTCATTTGTACAAAGTaGCCCCTGTTTCACTTTATTCTGGAAACATGCAGCTTTGTATCT +
Preference number: 5 (lower is better)
Translates to: VCISYLKEFMVICTK*PLFHFILETCSFVS
Trigger: AGATACAAAGCTGCATGTTTCCAGAATAAAGTGAAACAGGGGTCACTTTGTACAAATGACCATAAACTCTTTCAAATAAGAAATGCACAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS GCA 72 bp CCGCGGGGCCCGGGATCGGGACCCCTAATGCATCTCTaGCGCGCCCAACCCAGTCGCCAGCCTCTCACCGCC +
Preference number: 6 (lower is better)
Translates to: PRGPGSGPLMHL*RAQPSRQPLTA
Trigger: GGCGGTGAGAGGCTGGCGACTGGGTTGGGCGCGGCAGAGATGCATTAGGGGTCCCGATCCCGGGCCCCGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS CCA 72 bp GCAACTAGACCGGCCCCTGCCGCTCCGCAGGGAGCCTaGTACCCGCCTGGAGTTCCTTTCCCAGTGCTTTCC +
Preference number: 6 (lower is better)
Translates to: ATRPAPAAPQGA*YPPGVPFPVLS
Trigger: GGAAAGCACTGGGAAAGGAACTCCAGGCGGGTACCAGGCTCCCTGCGGAGCGGCAGGGGCCGGTCTAGTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262547.9
ENST00000609267.5
CDS GCA 72 bp ACCACAGACGCGGCGAGCCGCGCCCCGCCCACTGGGTaGTGGGCAGATGATTGGTGGAGACTCAGCTTCTTA +
Preference number: 6 (lower is better)
Translates to: TTDAASRAPPTG*WADDWWRLSFL
Trigger: TAAGAAGCTGAGTCTCCACCAATCATCTGCCCAGCACCCAGTGGGCGGGGCGCGGCTCGCCGCGTCTGTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262547.9
ENST00000609267.5
CDS CCA 72 bp ACAGACGCGGCGAGCCGCGCCCCGCCCACTGGGTGCTaGGCAGATGATTGGTGGAGACTCAGCTTCTTAGCA +
Preference number: 6 (lower is better)
Translates to: TDAASRAPPTGC*ADDWWRLSFLA
Trigger: TGCTAAGAAGCTGAGTCTCCACCAATCATCTGCCCAGCACCCAGTGGGCGGGGCGCGGCTCGCCGCGTCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262547.9
ENST00000609267.5
CDS CCA 72 bp AGCCGCGCCCCGCCCACTGGGTGCTGGGCAGATGATTaGTGGAGACTCAGCTTCTTAGCAACTAGACCGGCC +
Preference number: 6 (lower is better)
Translates to: SRAPPTGCWADD*WRLSFLATRPA
Trigger: GGCCGGTCTAGTTGCTAAGAAGCTGAGTCTCCACCAATCATCTGCCCAGCACCCAGTGGGCGGGGCGCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262547.9
ENST00000609267.5
CDS GCA 72 bp CTCCGTGCTTGTCAAACACTTCTGACCGCTTACGTGTaGAAAACCGGGGGACTGGGACTGGCGGGTGGGTGG +
Preference number: 6 (lower is better)
Translates to: LRACQTLLTAYV*KTGGLGLAGGW
Trigger: CCACCCACCCGCCAGTCCCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAGAAGTGTTTGACAAGCACGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000609267.5
CDS TCA 72 bp GGGGGACTGGGACTGGCGGGTGGGTGGTCTAGAACCTaGTCCTCCACCATAAGCTGGGATTTCCAATGGACT +
Preference number: 6 (lower is better)
Translates to: GGLGLAGGWSRT*SSTISWDFQWT
Trigger: AGTCCATTGGAAATCCCAGCTTATGGTGGAGGATCAGGTTCTAGACCACCCACCCGCCAGTCCCAGTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262547.9
ENST00000357236.8
ENST00000358866.10
ENST00000609267.5
CDS TCA 72 bp CCCCTGCCCAGTGTAGATCCTTGCCTTGATCACACTTaGGTCCCACCCATGCCTGCATCTACCAACCTCCTC +
Preference number: 6 (lower is better)
Translates to: PLPSVDPCLDHT*VPPMPASTNLL
Trigger: GAGGAGGTTGGTAGATGCAGGCATGGGTGGGACTCAAGTGTGATCAAGGCAAGGATCTACACTGGGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS TCA 72 bp TCTTGCCTGGGACTGGCGGGTGGGTGGTCTAGAACCTaGTCCTCCACCATAAGCTGGGATTTCCAATGGACT +
Preference number: 6 (lower is better)
Translates to: SCLGLAGGWSRT*SSTISWDFQWT
Trigger: AGTCCATTGGAAATCCCAGCTTATGGTGGAGGATCAGGTTCTAGACCACCCACCCGCCAGTCCCAGGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS TCA 72 bp GGGTGTCATGATGGGAAGGTCTCAGGCTGCCAAGTGTaGATCCTGGGTCTGCCACTTACTAACTTAGTGCCC +
Preference number: 6 (lower is better)
Translates to: GCHDGKVSGCQV*ILGLPLTNLVP
Trigger: GGGCACTAAGTTAGTAAGTGGCAGACCCAGGATTCACACTTGGCAGCCTGAGACCTTCCCATCATGACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS GCA 72 bp CATTTCATTACCTTCAAGTGGAGGCTTGCCTGTGGCTaGAGCTGTAGAGCAAGAGGGGCCTCACACACCACA +
Preference number: 6 (lower is better)
Translates to: HFITFKWRLACG*SCRARGASHTT
Trigger: TGTGGTGTGTGAGGCCCCTCTTGCTCTACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGGTAATGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS CCA 72 bp ATTTTCTCTCTCTCTCTCTCTCTGCATCCTTTCGGCTaGAGTAAGGGAAGCTCTTCCCCTCCTCTAGCCGCC +
Preference number: 6 (lower is better)
Translates to: IFSLSLSLHPFG*SKGSSSPPLAA
Trigger: GGCGGCTAGAGGAGGGGAAGAGCTTCCCTTACTCCAGCCGAAAGGATGCAGAGAGAGAGAGAGAGAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS GCA 72 bp ATTCTGGAAACATGCAGCTTTGTATCTGGACTGGGCTaGTCAGCTGGCAGCACATCTGGATGTAGCCCTCAC +
Preference number: 6 (lower is better)
Translates to: ILETCSFVSGLG*SAGSTSGCSPH
Trigger: GTGAGGGCTACATCCAGATGTGCTGCCAGCTGAGCAGCCCAGTCCAGATACAAAGCTGCATGTTTCCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS GCA 72 bp CTGAACCAGCAGTCATTTTCTCTCTCTCTCTCTCTCTaGATCCTTTCGGCTGGAGTAAGGGAAGCTCTTCCC +
Preference number: 6 (lower is better)
Translates to: LNQQSFSLSLSL*ILSAGVREALP
Trigger: GGGAAGAGCTTCCCTTACTCCAGCCGAAAGGATGCAGAGAGAGAGAGAGAGAGAAAATGACTGCTGGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608192.5
CDS TCA 72 bp TATAAACTTCCTCTGTCAATCCCAACAACATCCCTGTaGCCAAGACCTCTGGGTTGGCCGCCTTACTGTAGG +
Preference number: 6 (lower is better)
Translates to: YKLPLSIPTTSL*PRPLGWPPYCR
Trigger: CCTACAGTAAGGCGGCCAACCCAGAGGTCTTGGTCACAGGGATGTTGTTGGGATTGACAGAGGAAGTTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS TCA 72 bp CTCTGGACTTTCTCCATGGACTTGGTCCCTCACACCTaGTTCAAGCCTAAGCACTTGCTGACATATGTTGGC +
Preference number: 6 (lower is better)
Translates to: LWTFSMDLVPHT*FKPKHLLTYVG
Trigger: GCCAACATATGTCAGCAAGTGCTTAGGCTTGAATCAGGTGTGAGGGACCAAGTCCATGGAGAAAGTCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS CCA 72 bp CTTAATTTAAATGCAGCAAAACTGCATCCTTTCGGCTaGAGTAAGGGAAGCTCTTCCCCTCCTCTAGCCGCC +
Preference number: 6 (lower is better)
Translates to: LNLNAAKLHPFG*SKGSSSPPLAA
Trigger: GGCGGCTAGAGGAGGGGAAGAGCTTCCCTTACTCCAGCCGAAAGGATGCAGTTTTGCTGCATTTAAATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS CAA 72 bp GACCCCTGTTTCACTTTATTCTGGAAACATGCAGCTTaGTATCTGGACTGGGCTGCTCAGCTGGCAGCACAT +
Preference number: 6 (lower is better)
Translates to: DPCFTLFWKHAA*YLDWAAQLAAH
Trigger: ATGTGCTGCCAGCTGAGCAGCCCAGTCCAGATACAAAGCTGCATGTTTCCAGAATAAAGTGAAACAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS CAA 72 bp TTACAGAATCACATTTCATTACCTTCAAGTGGAGGCTaGCCTGTGGCTGCAGCTGTAGAGCAAGAGGGGCCT +
Preference number: 6 (lower is better)
Translates to: LQNHISLPSSGG*PVAAAVEQEGP
Trigger: AGGCCCCTCTTGCTCTACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGGTAATGAAATGTGATTCTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS GCA 72 bp ATCCTCTGGCCTAACTCCTTGAATCTTTCTTATCGATaGTCACACCCAGTGCCTGAAGCGTCACACATCCTT +
Preference number: 6 (lower is better)
Translates to: ILWPNSLNLSYR*SHPVPEASHIL
Trigger: AAGGATGTGTGACGCTTCAGGCACTGGGTGTGAGCATCGATAAGAAAGATTCAAGGAGTTAGGCCAGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS CCA 72 bp GTTTCACTTTATTCTGGAAACATGCAGCTTTGTATCTaGACTGGGCTGCTCAGCTGGCAGCACATCTGGATG +
Preference number: 6 (lower is better)
Translates to: VSLYSGNMQLCI*TGLLSWQHIWM
Trigger: CATCCAGATGTGCTGCCAGCTGAGCAGCCCAGTCCAGATACAAAGCTGCATGTTTCCAGAATAAAGTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS CAA 90 bp GTACAAAGTGACCCCTGTTTCACTTTATTCTGGAAACATGCAGCTTaGTATCTGGACTGGGCTGCTCAGCTGGCAGCACATCTGGATGTA +
Preference number: 6 (lower is better)
Translates to: VQSDPCFTLFWKHAA*YLDWAAQLAAHLDV
Trigger: TACATCCAGATGTGCTGCCAGCTGAGCAGCCCAGTCCAGATACAAAGCTGCATGTTTCCAGAATAAAGTGAAACAGGGGTCACTTTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS CAA 90 bp TTCATGTTTTTACAGAATCACATTTCATTACCTTCAAGTGGAGGCTaGCCTGTGGCTGCAGCTGTAGAGCAAGAGGGGCCTCACACACCA +
Preference number: 6 (lower is better)
Translates to: FMFLQNHISLPSSGG*PVAAAVEQEGPHTP
Trigger: TGGTGTGTGAGGCCCCTCTTGCTCTACAGCTGCAGCCACAGGCAAGCCTCCACTTGAAGGTAATGAAATGTGATTCTGTAAAAACATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460891.5
CDS TCA 72 bp AAAGTCAGCAAATCAAGGGGTGTTTGCCGGCCTGCTTaGTGCCTGGAAGATATCTATCCTTTTCAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: KVSKSRGVCRPA*CLEDIYPFQLC
Trigger: ACAGAGCTGAAAAGGATAGATATCTTCCAGGCATCAAGCAGGCCGGCAAACACCCCTTGATTTGCTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480488.2
CDS CCA 72 bp GCAAATCAAGGGGTGTTTGCCGGCCTGCTTGATGCCTaGAAGATATCTATCCTTTTCAGCTCTGTAATCCAA +
Preference number: 6 (lower is better)
Translates to: ANQGVFAGLLDA*KISILFSSVIQ
Trigger: TTGGATTACAGAGCTGAAAAGGATAGATATCTTCCAGGCATCAAGCAGGCCGGCAAACACCCCTTGATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480488.2
CDS TCA 72 bp CTTAAAGTCCTTCAATGTCTTGGAATTAGGGTGTCATaGTGGGAAGGTCTCAGGCTGCCAAGTGTGAATCCT +
Preference number: 6 (lower is better)
Translates to: LKVLQCLGIRVS*WEGLRLPSVNP
Trigger: AGGATTCACACTTGGCAGCCTGAGACCTTCCCATCATGACACCCTAATTCCAAGACATTGAAGGACTTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609267.5
CDS TCA 72 bp CTTGAATCTTTCTTATCGATGCTCACACCCAGTGCCTaGAGCGTCACACATCCTTCTCAGATGGATCTAATT +
Preference number: 6 (lower is better)
Translates to: LESFLSMLTPSA*SVTHPSQMDLI
Trigger: AATTAGATCCATCTGAGAAGGATGTGTGACGCTTCAGGCACTGGGTGTGAGCATCGATAAGAAAGATTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS TCA 72 bp CTCCTCTCTAGCATCAGGTTCATGGTCAAGCTTAAGTaGAACCCCTATAAACTTCCTCTGTCAATCCCAACA +
Preference number: 6 (lower is better)
Translates to: LLSSIRFMVKLK*NPYKLPLSIPT
Trigger: TGTTGGGATTGACAGAGGAAGTTTATAGGGGTTTCACTTAAGCTTGACCATGAACCTGATGCTAGAGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS CCA 72 bp TCATTTGTACAAAGTGACCCCTGTTTCACTTTATTCTaGAAACATGCAGCTTTGTATCTGGACTGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: SFVQSDPCFTLF*KHAALYLDWAA
Trigger: AGCAGCCCAGTCCAGATACAAAGCTGCATGTTTCCAGAATAAAGTGAAACAGGGGTCACTTTGTACAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS CAA 72 bp CATTTATTATCTAAAAGTCAGCAAATCAAGGGGTGTTaGCCGGCCTGCTTGATGCCTGGAAGATATCTATCC +
Preference number: 6 (lower is better)
Translates to: HLLSKSQQIKGC*PACLMPGRYLS
Trigger: GGATAGATATCTTCCAGGCATCAAGCAGGCCGGCAAACACCCCTTGATTTGCTGACTTTTAGATAATAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480488.2
CDS TCA 72 bp ATTCAGGTTTGCTGCCATCCAGAGTATAATATATGTTaGCATCTGGAGTGTCTGATTTCATTTCCAAAAGCG +
Preference number: 6 (lower is better)
Translates to: IQVCCHPEYNIC*HLECLISFPKA
Trigger: CGCTTTTGGAAATGAAATCAGACACTCCAGATGTCAACATATATTATACTCTGGATGGCAGCAAACCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
ENST00000609267.5
CDS CAA 72 bp GAACATTTTCAACATTGTCTTCAGGAGAGACTATATTaGGTGGTTCATAGTCTACGTGAAACACCTTTGTCA +
Preference number: 6 (lower is better)
Translates to: EHFQHCLQERLY*VVHSLRETPLS
Trigger: TGACAAAGGTGTTTCACGTAGACTATGAACCACCAAATATAGTCTCTCCTGAAGACAATGTTGAAAATGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
ENST00000609267.5
CDS CAA 90 bp AAGTGTCATGGTGTGCATTTCTTATTTGAAAGAGTTTATGGTCATTaGTACAAAGTGACCCCTGTTTCACTTTATTCTGGAAACATGCAG +
Preference number: 6 (lower is better)
Translates to: KCHGVHFLFERVYGH*YKVTPVSLYSGNMQ
Trigger: CTGCATGTTTCCAGAATAAAGTGAAACAGGGGTCACTTTGTACAAATGACCATAAACTCTTTCAAATAAGAAATGCACACCATGACACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS TCA 72 bp ATGATAGAGAAAGTGTCATGGTGTGCATTTCTTATTTaGAAGAGTTTATGGTCATTTGTACAAAGTGACCCC +
Preference number: 6 (lower is better)
Translates to: MIEKVSWCAFLI*KSLWSFVQSDP
Trigger: GGGGTCACTTTGTACAAATGACCATAAACTCTTTCAAATAAGAAATGCACACCATGACACTTTCTCTATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS TCA 72 bp AAGAGATTGCATATCAATCACTTGGTTATTCCCATGTaGGAATTAAAGCTGCATGATAGAGAAAGTGTCATG +
Preference number: 6 (lower is better)
Translates to: KRLHINHLVIPM*ELKLHDRESVM
Trigger: CATGACACTTTCTCTATCATGCAGCTTTAATTCTCACATGGGAATAACCAAGTGATTGATATGCAATCTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357236.8
CDS CCA 72 bp ATTTTCAACATTGTCTTCAGGAGAGACTATATTTGGTaGTTCATAGTCTACGTGAAACACCTTTGTCACAAT +
Preference number: 6 (lower is better)
Translates to: IFNIVFRRDYIW*FIVYVKHLCHN
Trigger: ATTGTGACAAAGGTGTTTCACGTAGACTATGAACCACCAAATATAGTCTCTCCTGAAGACAATGTTGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262547.9
ENST00000358866.10
ENST00000377630.9
ENST00000460891.5
ENST00000608192.5
ENST00000609267.5
CDS CAA 72 bp GGTGTGCATTTCTTATTTGAAAGAGTTTATGGTCATTaGTACAAAGTGACCCCTGTTTCACTTTATTCTGGA +
Preference number: 6 (lower is better)
Translates to: GVHFLFERVYGH*YKVTPVSLYSG
Trigger: TCCAGAATAAAGTGAAACAGGGGTCACTTTGTACAAATGACCATAAACTCTTTCAAATAAGAAATGCACACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357236.8