RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DYTN (Homo sapiens)

Ensembl gene IDs: ENSG00000232125

Ensembl transcript IDs: ENST00000452335.2, ENST00000477734.2, ENST00000674258.1

Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTCCCGTGATTGGGAAAGTCCTGCAGAGAGTGCACCGAGCAGGGTaGGTGACCCTTTCAGCAGCTGATAACCGGTGGCAGGTCGGGAGC +
Preference number: 1 (lower is better)
Translates to: SPVIGKVLQRVHRAG*VTLSAADNRWQVGS
Trigger: GCTCCCGACCTGCCACCGGTTATCAGCTGCTGAAAGGGTCACTCACCCTGCTCGGTGCACTCTCTGCAGGACTTTCCCAATCACGGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR CCA 90 bp GTGCCTTGTTTGCAGTTGTCTGCACAGGGAGGCAGCGGAGCATCATaGCTGCAAAGCAGGGACTCCGGATTTAGGATGCCAGCCTCTGCG +
Preference number: 1 (lower is better)
Translates to: VPCLQLSAQGGSGAS*LQSRDSGFRMPASA
Trigger: CGCAGAGGCTGGCATCCTAAATCCGGAGTCCCTGCTTTGCAGCCATGATGCTCCGCTGCCTCCCTGTGCAGACAACTGCAAACAAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR GCA 90 bp CTTGTTTGCAGTTGTCTGCACAGGGAGGCAGCGGAGCATCATGGCTaGAAAGCAGGGACTCCGGATTTAGGATGCCAGCCTCTGCGGCTT +
Preference number: 1 (lower is better)
Translates to: LVCSCLHREAAEHHG*KAGTPDLGCQPLRL
Trigger: AAGCCGCAGAGGCTGGCATCCTAAATCCGGAGTCCCTGCTTTGCAGCCATGATGCTCCGCTGCCTCCCTGTGCAGACAACTGCAAACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR TCA 90 bp CTTTTTGCTCCAGGTGGAGAGAAGATCAAGCCTGAGTTGTTCTCATaGATGCTGATGATCTCTGTGAGTCTGTGCCTTGTTTGCAGTTGT +
Preference number: 1 (lower is better)
Translates to: LFAPGGEKIKPELFS*MLMISVSLCLVCSC
Trigger: ACAACTGCAAACAAGGCACAGACTCACAGAGATCATCAGCATTCATGAGAACAACTCAGGCTTGATCTTCTCTCCACCTGGAGCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR-3UTR CCA 90 bp CATGGCTGCAAAGCAGGGACTCCGGATTTAGGATGCCAGCCTCTGCGGCTTGCTGCAGCTGATAACCGGTaGCAGGTCGGGAGCCACAGG +
Preference number: 2 (lower is better)
Translates to: HGCKAGTPDLGCQPLRLAAADNR*QVGSHR
Trigger: CCTGTGGCTCCCGACCTGCCACCGGTTATCAGCTGC...AGCAAGCCGCAGAGGCTGGCATCCTAAATCCGGAGTCCCTGCTTTGCAGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR-3UTR CCA 90 bp CTGGGCTCAACACCCCTTGGAAACAGCTGCGGGTGGCACTTTCCACAGGGCACACCTTCGAGTCATGCGTaGCCCAGAATCATAGCCTCC +
Preference number: 2 (lower is better)
Translates to: LGSTPLGNSCGWHFPQGTPSSHA*PRIIAS
Trigger: GGAGGCTATGATTCTGGGCCACGCATGACTCGAAGG...TGTGCCCTGTGGAAAGTGCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR-3UTR CCA 90 bp GAGCATCATGGCTGCAAAGCAGGGACTCCGGATTTAGGATGCCAGCCTCTGCGGGGAAACAGCTGCGGGTaGCACTTTCCACAGGGCACA +
Preference number: 2 (lower is better)
Translates to: EHHGCKAGTPDLGCQPLRGNSCG*HFPQGT
Trigger: TGTGCCCTGTGGAAAGTGCCACCCGCAGCTGTTTCC...CCGCAGAGGCTGGCATCCTAAATCCGGAGTCCCTGCTTTGCAGCCATGATGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR-3UTR GCA 90 bp ACTTCTCTGAGTCCCGTGATTGGGAAAGTCCTGCAGAGAGTGCACCGAGCAGGGCCCCTTGGAAACAGCTaGGGGTGGCACTTTCCACAG +
Preference number: 2 (lower is better)
Translates to: TSLSPVIGKVLQRVHRAGPLGNS*GWHFPQ
Trigger: CTGTGGAAAGTGCCACCCGCAGCTGTTTCCAAGGGG...CCCTGCTCGGTGCACTCTCTGCAGGACTTTCCCAATCACGGGACTCAGAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR-3UTR GCA 90 bp GAGCATCATGGCTGCAAAGCAGGGACTCCGGATTTAGGATGCCAGCCTCTGCGGAAACCCTTCGAGTCATaGGTGGCCCAGAATCATAGC +
Preference number: 2 (lower is better)
Translates to: EHHGCKAGTPDLGCQPLRKPFES*VAQNHS
Trigger: GCTATGATTCTGGGCCACGCATGACTCGAAGGGTTT...CCGCAGAGGCTGGCATCCTAAATCCGGAGTCCCTGCTTTGCAGCCATGATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR-3UTR CCA 90 bp GAGCATCATGGCTGCAAAGCAGGGACTCCGGATTTAGGATGCCAGCCTCTGCGGATGGGAGGCTCAGATTaGACCCAAGACAGGAATTTT +
Preference number: 2 (lower is better)
Translates to: EHHGCKAGTPDLGCQPLRMGGSD*TQDRNF
Trigger: AAAATTCCTGTCTTGGGTCCAATCTGAGCCTCCCAT...CCGCAGAGGCTGGCATCCTAAATCCGGAGTCCCTGCTTTGCAGCCATGATGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR-3UTR TCA 90 bp ACTTCTCTGAGTCCCGTGATTGGGAAAGTCCTGCAGAGAGTGCACCGAGCAGGGGGAATTTTTCTTCTTTaGTTGCTGGGCTCAACACCC +
Preference number: 2 (lower is better)
Translates to: TSLSPVIGKVLQRVHRAGGIFLL*LLGSTP
Trigger: GGGTGTTGAGCCCAGCAATCAAAGAAGAAAAATTCC...CCCTGCTCGGTGCACTCTCTGCAGGACTTTCCCAATCACGGGACTCAGAGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR-3UTR GCA 90 bp ATTGCTGGGCTCAACACCCCTTGGAAACAGCTGCGGGTGGCACTTTCCACAGGGACGAAAGTTGGGATCTaGTGTAGATCTGTTAGTAGT +
Preference number: 2 (lower is better)
Translates to: IAGLNTPWKQLRVALSTGTKVGI*CRSVSS
Trigger: ACTACTAACAGATCTACAGCAGATCCCAACTTTCGT...CCCTGTGGAAAGTGCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCCAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR-3UTR GCA 90 bp ACTTCTCTGAGTCCCGTGATTGGGAAAGTCCTGCAGAGAGTGCACCGAGCAGGGTTTTTCTTCTTTGATTaGTGGGCTCAACACCCCTTG +
Preference number: 2 (lower is better)
Translates to: TSLSPVIGKVLQRVHRAGFFFFD*WAQHPL
Trigger: CAAGGGGTGTTGAGCCCAGCAATCAAAGAAGAAAAA...CCCTGCTCGGTGCACTCTCTGCAGGACTTTCCCAATCACGGGACTCAGAGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR-3UTR GCA 90 bp GCAGATGTCAAAGTTGAGACACTTCAGACAGCGGTATCTCCAAATCTAGCTCTCACTCCGGATTTAGGATaGCAGCCTCTGCGGCTTGCT +
Preference number: 2 (lower is better)
Translates to: ADVKVETLQTAVSPNLALTPDLG*QPLRLA
Trigger: AGCAAGCCGCAGAGGCTGGCATCCTAAATCCGGAGT...GAGAGCTAGATTTGGAGATACCGCTGTCTGAAGTGTCTCAACTTTGACATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR-3UTR GCA 90 bp GCAGATGTCAAAGTTGAGACACTTCAGACAGCGGTATCTCCAAATCTAGCTCTCAGTCTGTGCCTTGTTTaGAGTTGTCTGCACAGGGAG +
Preference number: 2 (lower is better)
Translates to: ADVKVETLQTAVSPNLALSLCLV*SCLHRE
Trigger: CTCCCTGTGCAGACAACTGCAAACAAGGCACAGACT...GAGAGCTAGATTTGGAGATACCGCTGTCTGAAGTGTCTCAACTTTGACATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR CAA 90 bp ACTTCAGACAGCGGTATCTCCAAATCTAGCTCTCAAATCTGCTTTTaGCTCCAGGTGGAGAGAAGATCAAGCCTGAGTTGTTCTCATGAA +
Preference number: 2 (lower is better)
Translates to: TSDSGISKSSSQICF*LQVERRSSLSCSHE
Trigger: TTCATGAGAACAACTCAGGCTTGATCTTCTCTCCACCTGGAGCAAAAAGCAGATTTGAGAGCTAGATTTGGAGATACCGCTGTCTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR TCA 72 bp GGAAAGTCCTGCAGAGAGTGCACCGAGCAGGGTGAGTaGCCCTTTCAGCAGCTGATAACCGGTGGCAGGTCG +
Preference number: 3 (lower is better)
Translates to: GKSCRECTEQGE*PFQQLITGGRS
Trigger: CGACCTGCCACCGGTTATCAGCTGCTGAAAGGGTCACTCACCCTGCTCGGTGCACTCTCTGCAGGACTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR CCA 72 bp TTGCTGGGCTCAACACCCCTTGGAAACAGCTGCGGGTaGCACTTTCCACAGGGCACAGAGCACGACTCTCTC +
Preference number: 3 (lower is better)
Translates to: LLGSTPLGNSCG*HFPQGTEHDSL
Trigger: GAGAGAGTCGTGCTCTGTGCCCTGTGGAAAGTGCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCCAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR TCA 72 bp ATTGGGAAAGTCCTGCAGAGAGTGCACCGAGCAGGGTaGGTGACCCTTTCAGCAGCTGATAACCGGTGGCAG +
Preference number: 3 (lower is better)
Translates to: IGKVLQRVHRAG*VTLSAADNRWQ
Trigger: CTGCCACCGGTTATCAGCTGCTGAAAGGGTCACTCACCCTGCTCGGTGCACTCTCTGCAGGACTTTCCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR CCA 72 bp TTGCAGTTGTCTGCACAGGGAGGCAGCGGAGCATCATaGCTGCAAAGCAGGGACTCCGGATTTAGGATGCCA +
Preference number: 3 (lower is better)
Translates to: LQLSAQGGSGAS*LQSRDSGFRMP
Trigger: TGGCATCCTAAATCCGGAGTCCCTGCTTTGCAGCCATGATGCTCCGCTGCCTCCCTGTGCAGACAACTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR GCA 72 bp CATCATGGCTGCAAAGCAGGGACTCCGGATTTAGGATaGCAGCCTCTGCGGCTTGCTAATCATGTAGGTTAT +
Preference number: 3 (lower is better)
Translates to: HHGCKAGTPDLG*QPLRLANHVGY
Trigger: ATAACCTACATGATTAGCAAGCCGCAGAGGCTGGCATCCTAAATCCGGAGTCCCTGCTTTGCAGCCATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
3UTR TCA 72 bp CCAGGTGGAGAGAAGATCAAGCCTGAGTTGTTCTCATaGATGCTGATGATCTCTGTGAGTCTGTGCCTTGTT +
Preference number: 3 (lower is better)
Translates to: PGGEKIKPELFS*MLMISVSLCLV
Trigger: AACAAGGCACAGACTCACAGAGATCATCAGCATTCATGAGAACAACTCAGGCTTGATCTTCTCTCCACCTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR CCA 90 bp GCGGGTGGCACTTTCCACAGGGCACAGAGCACGACTCTCTCCCACGAAAGTTGGGCAGCTGATAACCGGTaGCAGGTCGGGAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: AGGTFHRAQSTTLSHESWAADNR*QVGSHR
Trigger: CCTGTGGCTCCCGACCTGCCACCGGTTATCAGCTGC...CCAACTTTCGTGGGAGAGAGTCGTGCTCTGTGCCCTGTGGAAAGTGCCACCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR TCA 90 bp CCCTTTCAGCAGCTGATAACCGGTGGCAGGTCGGGAGCCACAGGAGGATGGGAGACCGAGCAGGGTGAGTaGCCCTTTCAGCAGCTGATA +
Preference number: 4 (lower is better)
Translates to: PFQQLITGGRSGATGGWETEQGE*PFQQLI
Trigger: TATCAGCTGCTGAAAGGGTCACTCACCCTGCTCGGT...CTCCCATCCTCCTGTGGCTCCCGACCTGCCACCGGTTATCAGCTGCTGAAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR TCA 90 bp CTGCGGGTGGCACTTTCCACAGGGCACAGAGCACGACTCTCTCCCACGAAAGTTGTGCACCGAGCAGGGTaGGTGACCCTTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LRVALSTGHRARLSPTKVVHRAG*VTLSAA
Trigger: AGCTGCTGAAAGGGTCACTCACCCTGCTCGGTGCAC...AACTTTCGTGGGAGAGAGTCGTGCTCTGTGCCCTGTGGAAAGTGCCACCCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR GCA 90 bp GCGGGTGGCACTTTCCACAGGGCACAGAGCACGACTCTCTCCCACGAAAGTTGGCCCCTTGGAAACAGCTaGGGGTGGCACTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: AGGTFHRAQSTTLSHESWPLGNS*GWHFPQ
Trigger: CTGTGGAAAGTGCCACCCGCAGCTGTTTCCAAGGGG...CCAACTTTCGTGGGAGAGAGTCGTGCTCTGTGCCCTGTGGAAAGTGCCACCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR CCA 90 bp GATTGCTGGGCTCAACACCCCTTGGAAACAGCTGCGGGTGGCACTTTCCACAGGGGGCTCAACACCCCTTaGAAACAGCTGCGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: DCWAQHPLETAAGGTFHRGLNTP*KQLRVA
Trigger: TGCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCC...CCTGTGGAAAGTGCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCCAGCAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR TCA 90 bp ATTGCTGGGCTCAACACCCCTTGGAAACAGCTGCGGGTGGCACTTTCCACAGGGCGCAGTAGGACCTGCTaGATCAGGGAGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: IAGLNTPWKQLRVALSTGRSRTC*IRELSI
Trigger: GATTGACAGCTCCCTGATTCAGCAGGTCCTACTGCG...CCCTGTGGAAAGTGCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCCAGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR CCA 90 bp GAGCATCATGGCTGCAAAGCAGGGACTCCGGATTTAGGATGCCAGCCTCTGCGGCCTTCGAGTCATGCGTaGCCCAGAATCATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: EHHGCKAGTPDLGCQPLRPSSHA*PRIIAS
Trigger: GGAGGCTATGATTCTGGGCCACGCATGACTCGAAGG...CCGCAGAGGCTGGCATCCTAAATCCGGAGTCCCTGCTTTGCAGCCATGATGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR GCA 90 bp GGAAACAGCTGCGGGTGGCACTTTCCACAGGGCACAGAGCACGACTCTCTCCCACAGAAAGGGAGTGCTTaGGAGCTTCCCAGAAACTTG +
Preference number: 4 (lower is better)
Translates to: GNSCGWHFPQGTEHDSLPQKGSA*ELPRNL
Trigger: CAAGTTTCTGGGAAGCTCGCAAGCACTCCCTTTCTG...TGGGAGAGAGTCGTGCTCTGTGCCCTGTGGAAAGTGCCACCCGCAGCTGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR GCA 90 bp CATGGCTGCAAAGCAGGGACTCCGGATTTAGGATGCCAGCCTCTGCGGCTTGCTTGCACAGAAAGGGAGTaGTTGCGAGCTTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: HGCKAGTPDLGCQPLRLACTERE*LRASQK
Trigger: TTTCTGGGAAGCTCGCAAGCACTCCCTTTCTGTGCA...AGCAAGCCGCAGAGGCTGGCATCCTAAATCCGGAGTCCCTGCTTTGCAGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR GCA 90 bp GCATCATGGCTGCAAAGCAGGGACTCCGGATTTAGGATGCCAGCCTCTGCGGCTAGTCTGTGCCTTGTTTaGAGTTGTCTGCACAGGGAG +
Preference number: 4 (lower is better)
Translates to: ASWLQSRDSGFRMPASAASLCLV*SCLHRE
Trigger: CTCCCTGTGCAGACAACTGCAAACAAGGCACAGACT...AGCCGCAGAGGCTGGCATCCTAAATCCGGAGTCCCTGCTTTGCAGCCATGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR CCA 90 bp GATTGCTGGGCTCAACACCCCTTGGAAACAGCTGCGGGTGGCACTTTCCACAGGGCCGCAGGCATAAGCTaGAGAAAACCTGTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: DCWAQHPLETAAGGTFHRAAGIS*RKPVPL
Trigger: CAAAGGAACAGGTTTTCTCCAGCTTATGCCTGCGGC...CCTGTGGAAAGTGCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCCAGCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR CCA 90 bp TGCAAAGCAGGGACTCCGGATTTAGGATGCCAGCCTCTGCGGCTTGCTAATCATGGAAACAGCTGCGGGTaGCACTTTCCACAGGGCACA +
Preference number: 4 (lower is better)
Translates to: CKAGTPDLGCQPLRLANHGNSCG*HFPQGT
Trigger: TGTGCCCTGTGGAAAGTGCCACCCGCAGCTGTTTCC...ATGATTAGCAAGCCGCAGAGGCTGGCATCCTAAATCCGGAGTCCCTGCTTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR CCA 90 bp CCCTTTCAGCAGCTGATAACCGGTGGCAGGTCGGGAGCCACAGGAGGATGGGAGTTCTTCTTTGATTGCTaGGCTCAACACCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PFQQLITGGRSGATGGWEFFFDC*AQHPLE
Trigger: TTCCAAGGGGTGTTGAGCCCAGCAATCAAAGAAGAA...CTCCCATCCTCCTGTGGCTCCCGACCTGCCACCGGTTATCAGCTGCTGAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR TCA 90 bp AGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCCTGGCCTGCGCATGGTaGGGCACACCCTTTGGATTC +
Preference number: 4 (lower is better)
Translates to: SCATAFCHHTKRPLSLDSLACAW*GTPFGF
Trigger: GAATCCAAAGGGTGTGCCTCACCATGCGCAGGCCAG...GGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp TGCAAAGCAGGGACTCCGGATTTAGGATGCCAGCCTCTGCGGCTTGCTAATCATTCCGGAGCTCTGGGATaGACTTGTCCTGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: CKAGTPDLGCQPLRLANHSGALG*TCPGFS
Trigger: GGAAAACCCAGGACAAGTGCATCCCAGAGCTCCGGA...ATGATTAGCAAGCCGCAGAGGCTGGCATCCTAAATCCGGAGTCCCTGCTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR GCA 90 bp GCACTTTCCACAGGGCACAGAGCACGACTCTCTCCCACGAAAGTTGGGATCTGCAAACCCTTCGAGTCATaGGTGGCCCAGAATCATAGC +
Preference number: 4 (lower is better)
Translates to: ALSTGHRARLSPTKVGICKPFES*VAQNHS
Trigger: GCTATGATTCTGGGCCACGCATGACTCGAAGGGTTT...GCAGATCCCAACTTTCGTGGGAGAGAGTCGTGCTCTGTGCCCTGTGGAAAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR TCA 90 bp GATTGCTGGGCTCAACACCCCTTGGAAACAGCTGCGGGTGGCACTTTCCACAGGCCTGAGTTGTTCTCATaGATGCTGATGATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: DCWAQHPLETAAGGTFHRPELFS*MLMISV
Trigger: CACAGAGATCATCAGCATTCATGAGAACAACTCAGG...CCTGTGGAAAGTGCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCCAGCAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR TCA 90 bp AGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCCGCAGTAGGACCTGCTaGATCAGGGAGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: SCATAFCHHTKRPLSLDSRSRTC*IRELSI
Trigger: GATTGACAGCTCCCTGATTCAGCAGGTCCTACTGCG...GGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp AGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCACCGAGCAGGGTGAGTaGCCCTTTCAGCAGCTGATA +
Preference number: 4 (lower is better)
Translates to: SCATAFCHHTKRPLSLDSTEQGE*PFQQLI
Trigger: TATCAGCTGCTGAAAGGGTCACTCACCCTGCTCGGT...GGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp CTGCGGGTGGCACTTTCCACAGGGCACAGAGCACGACTCTCTCCCACGAAAGTTCTCAAATCTGCTTTTTaGTCCAGGTGGAGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LRVALSTGHRARLSPTKVLKSAF*SRWRED
Trigger: ATCTTCTCTCCACCTGGAGCAAAAAGCAGATTTGAG...AACTTTCGTGGGAGAGAGTCGTGCTCTGTGCCCTGTGGAAAGTGCCACCCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR TCA 90 bp TCTTTGATTGCTGGGCTCAACACCCCTTGGAAACAGCTGCGGGTGGCACTTTCCGGAATTTTTCTTCTTTaGTTGCTGGGCTCAACACCC +
Preference number: 4 (lower is better)
Translates to: SLIAGLNTPWKQLRVALSGIFLL*LLGSTP
Trigger: GGGTGTTGAGCCCAGCAATCAAAGAAGAAAAATTCC...GGAAAGTGCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCCAGCAATCAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR TCA 90 bp GATTGCTGGGCTCAACACCCCTTGGAAACAGCTGCGGGTGGCACTTTCCACAGGGAAGAGTACTTGCTTTaGAGTAACAGTCTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: DCWAQHPLETAAGGTFHREEYLL*SNSLFV
Trigger: CACAAAGAGACTGTTACTTCAAAGCAAGTACTCTTC...CCTGTGGAAAGTGCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCCAGCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR GCA 90 bp GAGCACGACTCTCTCCCACGAAAGTTGGGATCTGCTGTAGATCTGTTAGTAGTTACTCCGGATTTAGGATaGCAGCCTCTGCGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: EHDSLPRKLGSAVDLLVVTPDLG*QPLRLA
Trigger: AGCAAGCCGCAGAGGCTGGCATCCTAAATCCGGAGT...AACTACTAACAGATCTACAGCAGATCCCAACTTTCGTGGGAGAGAGTCGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR GCA 90 bp TCTTTGATTGCTGGGCTCAACACCCCTTGGAAACAGCTGCGGGTGGCACTTTCCTCTAGCTCTCAAATCTaGTTTTTGCTCCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SLIAGLNTPWKQLRVALSSSSQI*FLLQVE
Trigger: CTCCACCTGGAGCAAAAAGCAGATTTGAGAGCTAGA...GGAAAGTGCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCCAGCAATCAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR CCA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGAGGAAACAGCTGCGGGTaGCACTTTCCACAGGGCACA +
Preference number: 4 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGGNSCG*HFPQGT
Trigger: TGTGCCCTGTGGAAAGTGCCACCCGCAGCTGTTTCC...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp TTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCATGTGAGGCACACCCTTTaGATTCACCTGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LCNCILSSHQEAFEPGLHVRHTL*IHLVQQ
Trigger: CTGCTGGACCAGGTGAATCCAAAGGGTGTGCCTCAC...ATGGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
3UTR CAA 72 bp ATGAATGCTGATGATCTCTGTGAGTCTGTGCCTTGTTaGCAGTTGTCTGCACAGGGAGGCAGCGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: MNADDLCESVPC*QLSAQGGSGAS
Trigger: TGATGCTCCGCTGCCTCCCTGTGCAGACAACTGCAAACAAGGCACAGACTCACAGAGATCATCAGCATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR TCA 90 bp TCTTTGATTGCTGGGCTCAACACCCCTTGGAAACAGCTGCGGGTGGCACTTTCCAGAGAAGATCAAGCCTaGGTTGTTCTCATGAATGCT +
Preference number: 4 (lower is better)
Translates to: SLIAGLNTPWKQLRVALSREDQA*VVLMNA
Trigger: AGCATTCATGAGAACAACTCAGGCTTGATCTTCTCT...GGAAAGTGCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCCAGCAATCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR GCA 90 bp AGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCCAGAAAGGGAGTGCTTaGGAGCTTCCCAGAAACTTG +
Preference number: 4 (lower is better)
Translates to: SCATAFCHHTKRPLSLDSQKGSA*ELPRNL
Trigger: CAAGTTTCTGGGAAGCTCGCAAGCACTCCCTTTCTG...GGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGATCCGGAGCTCTGGGATaGACTTGTCCTGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGSGALG*TCPGFS
Trigger: GGAAAACCCAGGACAAGTGCATCCCAGAGCTCCGGA...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGAGGCTTTGTGCCCTGGTaGTGTGCAAAGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGGFVPW*CAKWSL
Trigger: CAGAGACCACTTTGCACAGCACCAGGGCACAAAGCC...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp CTGGGCTCAACACCCCTTGGAAACAGCTGCGGGTGGCACTTTCCACAGGGCACATCTTTGAAGAGTACTTaGTTTGAAGTAACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LGSTPLGNSCGWHFPQGTSLKST*FEVTVS
Trigger: AGAGACTGTTACTTCAAAGCAAGTACTCTTCAAAGA...TGTGCCCTGTGGAAAGTGCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR CCA 90 bp AGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCTCCTGGAATGACAGATaGCAAGTGGGTCCCTGTAAC +
Preference number: 4 (lower is better)
Translates to: SCATAFCHHTKRPLSLDSSWNDR*QVGPCN
Trigger: GTTACAGGGACCCACTTGCCATCTGTCATTCCAGGA...GGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACCCTTTGGATTCACCTaGTCCAGCAGCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGPFGFT*SSSCCL
Trigger: AAGGCAGCAGCTGCTGGACCAGGTGAATCCAAAGGG...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp CTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGGAAGGACCGGGTGGCTaGAACCTTGCCTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: LLIQLCNCILSSHQEAFEEGPGG*NLACRS
Trigger: GGACCTACAGGCAAGGTTGCAGCCACCCGGTCCTTC...CTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGATGTGCCCTGGTGCTGTaGAAAGTGGTCTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGCALVL*KVVSGD
Trigger: ATCACCAGAGACCACTTTGCACAGCACCAGGGCACA...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp ACAGAGCACGACTCTCTCCCACGAAAGTTGGGATCTGCTGTAGATCTGTTAGTATCTGAGTCCCGTGATTaGGAAAGTCCTGCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: TEHDSLPRKLGSAVDLLVSESRD*ESPAES
Trigger: ACTCTCTGCAGGACTTTCCCAATCACGGGACTCAGA...TACTAACAGATCTACAGCAGATCCCAACTTTCGTGGGAGAGAGTCGTGCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR CCA 90 bp TTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCATCAGCAGGAACCATTTTaGGGATGTCCTGCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: LCNCILSSHQEAFEPGLHQQEPF*GCPASV
Trigger: GACTGAAGCAGGACATCCCCAAAATGGTTCCTGCTG...ATGGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGAGGCAGATGTCAAAGTTaGGACACTTCAGACAGCGGT +
Preference number: 4 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGGRCQS*DTSDSG
Trigger: ACCGCTGTCTGAAGTGTCTCAACTTTGACATCTGCC...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp CTGCGGCTTGCTAATCATGTAGGTTATTTAACTTCTCTGAGTCCCGTGATTGGGGGCAGATGTCAAAGTTaGGACACTTCAGACAGCGGT +
Preference number: 4 (lower is better)
Translates to: LRLANHVGYLTSLSPVIGGRCQS*DTSDSG
Trigger: ACCGCTGTCTGAAGTGTCTCAACTTTGACATCTGCC...CCCAATCACGGGACTCAGAGAAGTTAAATAACCTACATGATTAGCAAGCCGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR TCA 90 bp AGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCCTTCAGTGGCATTCTTaGTCTGCAAATAATCCCCTC +
Preference number: 4 (lower is better)
Translates to: SCATAFCHHTKRPLSLDSLQWHS*SANNPL
Trigger: GAGGGGATTATTTGCAGATCAAGAATGCCACTGAAG...GGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp AATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTGCCCTGCACACTCGCTaGGCTCCACTGTACAGGTCC +
Preference number: 4 (lower is better)
Translates to: NSFNTVVQLHFVITPRGLALHTR*APLYRS
Trigger: GGACCTGTACAGTGGAGCTCAGCGAGTGTGCAGGGC...AAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp TTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCATCCCCAACCTTCACTCTaGACTGCAGAACTAAGATAC +
Preference number: 4 (lower is better)
Translates to: LCNCILSSHQEAFEPGLHPQPSL*TAELRY
Trigger: GTATCTTAGTTCTGCAGTTCAGAGTGAAGGTTGGGG...ATGGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp TGCAAAGCAGGGACTCCGGATTTAGGATGCCAGCCTCTGCGGCTTGCTAATCATACGAAAGTTGGGATCTaGTGTAGATCTGTTAGTAGT +
Preference number: 4 (lower is better)
Translates to: CKAGTPDLGCQPLRLANHTKVGI*CRSVSS
Trigger: ACTACTAACAGATCTACAGCAGATCCCAACTTTCGT...ATGATTAGCAAGCCGCAGAGGCTGGCATCCTAAATCCGGAGTCCCTGCTTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR GCA 90 bp CTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCCCTTGGAAACAGCTaGGGGTGGCACTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: LLIQLCNCILSSHQEAFEPLGNS*GWHFPQ
Trigger: CTGTGGAAAGTGCCACCCGCAGCTGTTTCCAAGGGG...CTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp TTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCATTTGTGTTTGGCTTTGTaGCCTGGTGCTGTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: LCNCILSSHQEAFEPGLHLCLAL*PGAVQS
Trigger: ACTTTGCACAGCACCAGGGCACAAAGCCAAACACAA...ATGGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp CTTAATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCGGGCAGAGAAGGCCCTaGACACTCGCTGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LNSFNTVVQLHFVITPRGGQRRP*TLAELH
Trigger: GTGGAGCTCAGCGAGTGTGCAGGGCCTTCTCTGCCC...GCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp CACAGAGCACGACTCTCTCCCACGAAAGTTGGGATCTGCTGTAGATCTGTTAGTATGGGAGGCTCAGATTaGACCCAAGACAGGAATTTT +
Preference number: 4 (lower is better)
Translates to: HRARLSPTKVGICCRSVSMGGSD*TQDRNF
Trigger: AAAATTCCTGTCTTGGGTCCAATCTGAGCCTCCCAT...ACTAACAGATCTACAGCAGATCCCAACTTTCGTGGGAGAGAGTCGTGCTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR CCA 90 bp AATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTGCAGCTGATAACCGGTaGCAGGTCGGGAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: NSFNTVVQLHFVITPRGLAADNR*QVGSHR
Trigger: CCTGTGGCTCCCGACCTGCCACCGGTTATCAGCTGC...AAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp AATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTGTGCACCGAGCAGGGTaGGTGACCCTTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: NSFNTVVQLHFVITPRGLVHRAG*VTLSAA
Trigger: AGCTGCTGAAAGGGTCACTCACCCTGCTCGGTGCAC...AAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp TTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCATGAATGCAGTGCTCAATaGCAGGATGAGACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: LCNCILSSHQEAFEPGLHECSAQ*QDETSD
Trigger: ATCAGAAGTCTCATCCTGTCATTGAGCACTGCATTC...ATGGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGATTGGGCAAGGCAATTTaGTCAACAAGGGCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGLGKAI*STRAEK
Trigger: CTTCTCTGCCCTTGTTGATCAAATTGCCTTGCCCAA...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp CACAGAGCACGACTCTCTCCCACGAAAGTTGGGATCTGCTGTAGATCTGTTAGTTTTTTCTTCTTTGATTaGTGGGCTCAACACCCCTTG +
Preference number: 4 (lower is better)
Translates to: HRARLSPTKVGICCRSVSFFFFD*WAQHPL
Trigger: CAAGGGGTGTTGAGCCCAGCAATCAAAGAAGAAAAA...ACTAACAGATCTACAGCAGATCCCAACTTTCGTGGGAGAGAGTCGTGCTCTGTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR GCA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCTTGATGTTACCTaGCTCTTTCTTTTCCACGGC +
Preference number: 4 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGLLDVT*LFLFHG
Trigger: GCCGTGGAAAAGAAAGAGGCAGGTAACATCAAGGAG...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp CTTGCTAATCATGTAGGTTATTTAACTTCTCTGAGTCCCGTGATTGGGAAAGTCTTGTTTGCAGTTGTCTaGACAGGGAGGCAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: LANHVGYLTSLSPVIGKVLFAVV*TGRQRS
Trigger: GCTCCGCTGCCTCCCTGTGCAGACAACTGCAAACAA...GACTTTCCCAATCACGGGACTCAGAGAAGTTAAATAACCTACATGATTAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR GCA 90 bp ACAGAGCACGACTCTCTCCCACGAAAGTTGGGATCTGCTGTAGATCTGTTAGTAATCTCTGTGAGTCTGTaGCTTGTTTGCAGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: TEHDSLPRKLGSAVDLLVISVSL*LVCSCL
Trigger: CAGACAACTGCAAACAAGGCACAGACTCACAGAGAT...TACTAACAGATCTACAGCAGATCCCAACTTTCGTGGGAGAGAGTCGTGCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR CCA 90 bp AATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTGGGCTCAACACCCCTTaGAAACAGCTGCGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: NSFNTVVQLHFVITPRGLGLNTP*KQLRVA
Trigger: TGCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCC...AAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGATGTATTCTGCATTGCTaGCATCTGAATGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGCILHC*HLNAVL
Trigger: GAGCACTGCATTCAGATGTCAGCAATGCAGAATACA...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp AGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCTTGTTCCCCACATTTTaGAAGGAAGAAGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: SCATAFCHHTKRPLSLDSLFPTF*KEEDEG
Trigger: TCCTTCATCTTCTTCCTTTCAAAATGTGGGGAACAA...GGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp AATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTACCTGGTCCAGCAGCTaGTGCCTTCTCGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: NSFNTVVQLHFVITPRGLTWSSS*CLLAAS
Trigger: AGAAGCAGCGAGAAGGCAGCAGCTGCTGGACCAGGT...AAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGATTCTTCTTTGATTGCTaGGCTCAACACCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGFFFDC*AQHPLE
Trigger: TTCCAAGGGGTGTTGAGCCCAGCAATCAAAGAAGAA...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp CTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGAGCTCTTGGAGTGCCTaGGAAAGTTGCTGCACAGAA +
Preference number: 4 (lower is better)
Translates to: LLIQLCNCILSSHQEAFESSWSA*ESCCTE
Trigger: TTCTGTGCAGCAACTTTCTCAGGCACTCCAAGAGCT...CTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp AGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCTATCCTGGTTGGTTTTaGGTTTGTGAATCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SCATAFCHHTKRPLSLDSYPGWF*VCESLF
Trigger: AAACAAGGATTCACAAACTCAAAACCAACCAGGATA...GGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp CTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGTTGAAAGGAAGAAGATaGAGGACCGGGTGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LLIQLCNCILSSHQEAFELKGRR*RTGWLQ
Trigger: TTGCAGCCACCCGGTCCTTCATCTTCTTCCTTTCAA...CTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGAACTTCTGATGGGACTTaGTGTGAAGACCAGATAAGA +
Preference number: 4 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGTSDGT*CEDQIR
Trigger: TCTTATCTGGTCTTCACAGCAAGTCCCATCAGAAGT...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGATTTGACAATAGTTCTTaGAGTTCCTCTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGFDNSS*SSSSSS
Trigger: GCTGGAGGAAGAGGAACTGCAAGAACTATTGTCAAA...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp AGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCATACAGTTGTGCAACTaGATTTTGTCATCACACCAA +
Preference number: 4 (lower is better)
Translates to: SCATAFCHHTKRPLSLDSIQLCN*ILSSHQ
Trigger: TTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT...GGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp CTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGGCCGCAGGCATAAGCTaGAGAAAACCTGTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLIQLCNCILSSHQEAFEAAGIS*RKPVPL
Trigger: CAAAGGAACAGGTTTTCTCCAGCTTATGCCTGCGGC...CTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp CTTAATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCCTTCGAGTCATGCGTaGCCCAGAATCATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LNSFNTVVQLHFVITPRGPSSHA*PRIIAS
Trigger: GGAGGCTATGATTCTGGGCCACGCATGACTCGAAGG...GCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp TTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCATCAAATTCTTTCTTCCTaGGAGGTGTATATAGCTTGC +
Preference number: 4 (lower is better)
Translates to: LCNCILSSHQEAFEPGLHQILSS*EVYIAC
Trigger: GCAAGCTATATACACCTCCCAGGAAGAAAGAATTTG...ATGGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp TTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCATTTTTCAGTTGAAGAATaGTCAACCTTGTTCCCCACA +
Preference number: 4 (lower is better)
Translates to: LCNCILSSHQEAFEPGLHFSVEE*STLFPT
Trigger: TGTGGGGAACAAGGTTGACCATTCTTCAACTGAAAA...ATGGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp CTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGTTTGCAGCAGAGGAATaGGGACAGGGGAACAAAAAG +
Preference number: 4 (lower is better)
Translates to: LLIQLCNCILSSHQEAFEFAAEE*GQGNKK
Trigger: CTTTTTGTTCCCCTGTCCTCATTCCTCTGCTGCAAA...CTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp CTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGACAAATTTCCTGGAATaGCAGATGGCAAGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLIQLCNCILSSHQEAFETNFLE*QMASGS
Trigger: GGACCCACTTGCCATCTGTCATTCCAGGAAATTTGT...CTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp CTTAATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCTTCCTACAGCGCCCCTaGAGAAGGTTGTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LNSFNTVVQLHFVITPRGFLQRP*RRLFLR
Trigger: CCTCAGAAACAACCTTCTTCAGGGGCGCTGTAGGAA...GCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGATGGAACCTTTTCAGTTaGAGAATGGTCAACCTTGTT +
Preference number: 4 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGWNLFS*RMVNLV
Trigger: AACAAGGTTGACCATTCTTCAACTGAAAAGGTTCCA...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp CTTAATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCACACCAAGAGGCCTTTaGGCCTGGACTCCATTTCAC +
Preference number: 4 (lower is better)
Translates to: LNSFNTVVQLHFVITPRGTPRGL*AWTPFH
Trigger: GTGAAATGGAGTCCAGGCTCAAAGGCCTCTTGGTGT...GCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGATTATCTGTTGTAGCTTaGTCCATAGACTATCCTGGT +
Preference number: 4 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGLSVVA*SIDYPG
Trigger: ACCAGGATAGTCTATGGACCAAGCTACAACAGATAA...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp CTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGTGCATTGCTGACATCTaGATGCAGTGCTCAATGACA +
Preference number: 4 (lower is better)
Translates to: LLIQLCNCILSSHQEAFECIADI*MQCSMT
Trigger: TGTCATTGAGCACTGCATTCAGATGTCAGCAATGCA...CTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp CTTAATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCAAAGTGGTCTCTGGTaGTTCTGGATTTCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LNSFNTVVQLHFVITPRGQSGLW*FWISQS
Trigger: GCTCTGCGAAATCCAGAATCACCAGAGACCACTTTG...GCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp CTTAATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCTGCACAGAAAGGGAGTaGTTGCGAGCTTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LNSFNTVVQLHFVITPRGCTERE*LRASQK
Trigger: TTTCTGGGAAGCTCGCAAGCACTCCCTTTCTGTGCA...GCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp AATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTAAACCCTTCGAGTCATaGGTGGCCCAGAATCATAGC +
Preference number: 4 (lower is better)
Translates to: NSFNTVVQLHFVITPRGLKPFES*VAQNHS
Trigger: GCTATGATTCTGGGCCACGCATGACTCGAAGGGTTT...AAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGAGAGGTGTATATAGCTTaGAACTTGTCTTTGTATTGG +
Preference number: 4 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGEVYIA*NLSLYW
Trigger: CCAATACAAAGACAAGTTGCAAGCTATATACACCTC...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp CTTAATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTGGGTTTTCCTCCCTaGCCTTCTGAAACAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LNSFNTVVQLHFVITPRGLGFPP*PSETAL
Trigger: AAGAGCTGTTTCAGAAGGCCAGGGAGGAAAACCCAG...GCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp CTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGATGGGAGGCTCAGATTaGACCCAAGACAGGAATTTT +
Preference number: 4 (lower is better)
Translates to: LLIQLCNCILSSHQEAFEMGGSD*TQDRNF
Trigger: AAAATTCCTGTCTTGGGTCCAATCTGAGCCTCCCAT...CTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp CTTAATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCTCTGAGTCCCGTGATTaGGAAAGTCCTGCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: LNSFNTVVQLHFVITPRGSESRD*ESPAES
Trigger: ACTCTCTGCAGGACTTTCCCAATCACGGGACTCAGA...GCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGAACTAATGACTTTCTGTaGCATCTTTTGTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGTNDFL*HLLCLA
Trigger: AGCCAAACACAAAAGATGCCACAGAAAGTCATTAGT...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp CTTAATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCAAGAGGTTCCCCTGTTaGAGCATCTTCAGTGGCATT +
Preference number: 4 (lower is better)
Translates to: LNSFNTVVQLHFVITPRGKRFPC*SIFSGI
Trigger: AATGCCACTGAAGATGCTTCAACAGGGGAACCTCTT...GCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp CTTAATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCTCGCAGAGCATGCTCTaGATTTGTGTGACTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LNSFNTVVQLHFVITPRGSQSML*ICVTSV
Trigger: CACAGAAGTCACACAAATGCAGAGCATGCTCTGCGA...GCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp CTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGTCAATCAAGTCCAACTaGCACAGAGTTTGCACTGAT +
Preference number: 4 (lower is better)
Translates to: LLIQLCNCILSSHQEAFESIKSN*HRVCTD
Trigger: ATCAGTGCAAACTCTGTGCCAGTTGGACTTGATTGA...CTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR TCA 90 bp CTTAATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCGGAATTTTTCTTCTTTaGTTGCTGGGCTCAACACCC +
Preference number: 4 (lower is better)
Translates to: LNSFNTVVQLHFVITPRGGIFLL*LLGSTP
Trigger: GGGTGTTGAGCCCAGCAATCAAAGAAGAAAAATTCC...GCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp CTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGAACTGGCACAGAGTTTaGACTGATTGTAATTTGAAG +
Preference number: 4 (lower is better)
Translates to: LLIQLCNCILSSHQEAFENWHRV*TDCNLK
Trigger: CTTCAAATTACAATCAGTGCAAACTCTGTGCCAGTT...CTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp AATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTTTTTCTTCTTTGATTaGTGGGCTCAACACCCCTTG +
Preference number: 4 (lower is better)
Translates to: NSFNTVVQLHFVITPRGLFFFFD*WAQHPL
Trigger: CAAGGGGTGTTGAGCCCAGCAATCAAAGAAGAAAAA...AAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp CTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGACCTTCACTCTGAACTaGAGAACTAAGATACATAAG +
Preference number: 4 (lower is better)
Translates to: LLIQLCNCILSSHQEAFETFTLN*RTKIHK
Trigger: CTTATGTATCTTAGTTCTGCAGTTCAGAGTGAAGGT...CTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp CTTAATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCATGACAGATGGCAAGTaGGTCCCTGTAACTAGAAAT +
Preference number: 4 (lower is better)
Translates to: LNSFNTVVQLHFVITPRGMTDGK*VPVTRN
Trigger: ATTTCTAGTTACAGGGACCCACTTGCCATCTGTCAT...GCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR GCA 90 bp AATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTACGAAAGTTGGGATCTaGTGTAGATCTGTTAGTAGT +
Preference number: 4 (lower is better)
Translates to: NSFNTVVQLHFVITPRGLTKVGI*CRSVSS
Trigger: ACTACTAACAGATCTACAGCAGATCCCAACTTTCGT...AAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CCA 90 bp AATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTATTTCACAAATTTCCTaGAATGACAGATGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: NSFNTVVQLHFVITPRGLISQIS*NDRWQV
Trigger: CACTTGCCATCTGTCATTCCAGGAAATTTGTGAAAT...AAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp GAGCATCATGGCTGCAAAGCAGGGACTCCGGATTTAGGATGCCAGCCTCTGCGGTGGGCTCAACACCCCTaGGAAACAGCTGCGGGTGGC +
Preference number: 5 (lower is better)
Translates to: EHHGCKAGTPDLGCQPLRWAQHP*ETAAGG
Trigger: GCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCCA...CCGCAGAGGCTGGCATCCTAAATCCGGAGTCCCTGCTTTGCAGCCATGATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS CCA 90 bp GTACTGAATGGAGACGCTGGCCTGCGCATGGTGAGGCACACCCTTTaGATTCACCTGGTCCAGCAGCTGCTGCCTTCTCGCTGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: VLNGDAGLRMVRHTL*IHLVQQLLPSRCFF
Trigger: AAAGAAGCAGCGAGAAGGCAGCAGCTGCTGGACCAGGTGAATCCAAAGGGTGTGCCTCACCATGCGCAGGCCAGCGTCTCCATTCAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674258.1
CDS CCA 90 bp GAGAAGGCTCAGAGTGAGTTCCGGAGCTCTGGGATGCACTTGTCCTaGGTTTTCCTCCCTGGCCTTCTGAAACAGCTCTTGGAGTGCCTG +
Preference number: 5 (lower is better)
Translates to: EKAQSEFRSSGMHLS*VFLPGLLKQLLECL
Trigger: CAGGCACTCCAAGAGCTGTTTCAGAAGGCCAGGGAGGAAAACCCAGGACAAGTGCATCCCAGAGCTCCGGAACTCACTCTGAGCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452335.2
ENST00000477734.2
ENST00000674258.1
CDS CCA 90 bp CCACGGCTGCCAGAGCAGGACTGCTCATTTCAGCAGGAACCATTTTaGGGATGTCCTGCTTCAGTCCCTCCTGATAACTGGGTAGGGCAC +
Preference number: 5 (lower is better)
Translates to: PRLPEQDCSFQQEPF*GCPASVPPDNWVGH
Trigger: GTGCCCTACCCAGTTATCAGGAGGGACTGAAGCAGGACATCCCCAAAATGGTTCCTGCTGAAATGAGCAGTCCTGCTCTGGCAGCCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS-3UTR CAA 90 bp GGAAACAGCTGCGGGTGGCACTTTCCACAGGGCACAGAGCACGACTCTCTCCCATCTCTCCCACGAAAGTaGGGATCTGCTGTAGATCTG +
Preference number: 5 (lower is better)
Translates to: GNSCGWHFPQGTEHDSLPSLPRK*GSAVDL
Trigger: CAGATCTACAGCAGATCCCAACTTTCGTGGGAGAGA...TGGGAGAGAGTCGTGCTCTGTGCCCTGTGGAAAGTGCCACCCGCAGCTGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR CAA 90 bp GCACTTTCCACAGGGCACAGAGCACGACTCTCTCCCACGAAAGTTGGGATCTGCGAGTGCCTGAGAAAGTaGCTGCACAGAAAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: ALSTGHRARLSPTKVGICECLRK*LHRKGV
Trigger: CACTCCCTTTCTGTGCAGCAACTTTCTCAGGCACTC...GCAGATCCCAACTTTCGTGGGAGAGAGTCGTGCTCTGTGCCCTGTGGAAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR CAA 90 bp AGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCTGGGCTCAACACCCCTaGGAAACAGCTGCGGGTGGC +
Preference number: 5 (lower is better)
Translates to: SCATAFCHHTKRPLSLDSWAQHP*ETAAGG
Trigger: GCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCCA...GGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp GAGCATCATGGCTGCAAAGCAGGGACTCCGGATTTAGGATGCCAGCCTCTGCGGTGGCAGATGTCAAAGTaGAGACACTTCAGACAGCGG +
Preference number: 5 (lower is better)
Translates to: EHHGCKAGTPDLGCQPLRWQMSK*RHFRQR
Trigger: CCGCTGTCTGAAGTGTCTCAACTTTGACATCTGCCA...CCGCAGAGGCTGGCATCCTAAATCCGGAGTCCCTGCTTTGCAGCCATGATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR CAA 90 bp CTGCGGGTGGCACTTTCCACAGGGCACAGAGCACGACTCTCTCCCACGAAAGTTTTGTGGCTCGGTATTTaGAAAGAGGGCTGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: LRVALSTGHRARLSPTKVLWLGI*KEGCLL
Trigger: CAGGAGACAGCCCTCTTTCAAAATACCGAGCCACAA...AACTTTCGTGGGAGAGAGTCGTGCTCTGTGCCCTGTGGAAAGTGCCACCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS GCA 90 bp CACACCCTTTGGATTCACCTGGTCCAGCAGCTGCTGCCTTCTCGCTaGTTCTTTCTTCCTACAGCGCCCCTGAAGAAGGTTGTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: HTLWIHLVQQLLPSR*FFLPTAPLKKVVSE
Trigger: CTCAGAAACAACCTTCTTCAGGGGCGCTGTAGGAAGAAAGAAGCAGCGAGAAGGCAGCAGCTGCTGGACCAGGTGAATCCAAAGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS-3UTR CAA 90 bp GCACTTTCCACAGGGCACAGAGCACGACTCTCTCCCACGAAAGTTGGGATCTGCACAGAAAGGGAGTGCTaGCGAGCTTCCCAGAAACTT +
Preference number: 5 (lower is better)
Translates to: ALSTGHRARLSPTKVGICTEREC*RASQKL
Trigger: AAGTTTCTGGGAAGCTCGCAAGCACTCCCTTTCTGT...GCAGATCCCAACTTTCGTGGGAGAGAGTCGTGCTCTGTGCCCTGTGGAAAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS GCA 90 bp GCTCTTGGAGTGCCTGAGAAAGTTGCTGCACAGAAAGGGAGTGCTTaGGAGCTTCCCAGAAACTTGGACGCAGTAGGACCTGCTGAATCA +
Preference number: 5 (lower is better)
Translates to: ALGVPEKVAAQKGSA*ELPRNLDAVGPAES
Trigger: TGATTCAGCAGGTCCTACTGCGTCCAAGTTTCTGGGAAGCTCGCAAGCACTCCCTTTCTGTGCAGCAACTTTCTCAGGCACTCCAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452335.2
ENST00000477734.2
ENST00000674258.1
CDS-3UTR CAA 90 bp CTGGGCTCAACACCCCTTGGAAACAGCTGCGGGTGGCACTTTCCACAGGGCACAAGGAATTTTTCTTCTTaGATTGCTGGGCTCAACACC +
Preference number: 5 (lower is better)
Translates to: LGSTPLGNSCGWHFPQGTRNFSS*IAGLNT
Trigger: GGTGTTGAGCCCAGCAATCAAAGAAGAAAAATTCCT...TGTGCCCTGTGGAAAGTGCCACCCGCAGCTGTTTCCAAGGGGTGTTGAGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS GCA 90 bp GGCACCTGTGGCTGCTGTTTCCATTGGTCCAGTTGGCCTTACATCTaGTGTTCCTTTAGAACTCTTGTACTGAATGGAGACGCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: GTCGCCFHWSSWPYI*CSFRTLVLNGDAGL
Trigger: CAGGCCAGCGTCTCCATTCAGTACAAGAGTTCTAAAGGAACAGCAGATGTAAGGCCAACTGGACCAATGGAAACAGCAGCCACAGGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674258.1
CDS CCA 90 bp CTGTCTCCTGAGAGGGTTATTAGGGCAGCGGCCGCAGGCATAAGCTaGAGAAAACCTGTTCCTTTGCTGTTGTACATTGTCGTGAGAAGG +
Preference number: 5 (lower is better)
Translates to: LSPERVIRAAAAGIS*RKPVPLLLYIVVRR
Trigger: CCTTCTCACGACAATGTACAACAGCAAAGGAACAGGTTTTCTCCAGCTTATGCCTGCGGCCGCTGCCCTAATAACCCTCTCAGGAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452335.2
ENST00000477734.2
ENST00000674258.1
CDS-3UTR CAA 90 bp CATGGCTGCAAAGCAGGGACTCCGGATTTAGGATGCCAGCCTCTGCGGCTTGCTAGAAAACCTGTTCCTTaGCTGTTGTACATTGTCGTG +
Preference number: 5 (lower is better)
Translates to: HGCKAGTPDLGCQPLRLARKPVP*LLYIVV
Trigger: CACGACAATGTACAACAGCAAAGGAACAGGTTTTCT...AGCAAGCCGCAGAGGCTGGCATCCTAAATCCGGAGTCCCTGCTTTGCAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS GCA 90 bp TCAAATTGGGCAAGGCAATTTGATCAACAAGGGCAGAGAAGGCCCTaGACACTCGCTGAGCTCCACTGTACAGGTCCATGTTTACTGAAG +
Preference number: 5 (lower is better)
Translates to: SNWARQFDQQGQRRP*TLAELHCTGPCLLK
Trigger: CTTCAGTAAACATGGACCTGTACAGTGGAGCTCAGCGAGTGTGCAGGGCCTTCTCTGCCCTTGTTGATCAAATTGCCTTGCCCAATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS-3UTR CAA 90 bp AGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCTCTCTCCCACGAAAGTaGGGATCTGCTGTAGATCTG +
Preference number: 5 (lower is better)
Translates to: SCATAFCHHTKRPLSLDSSLPRK*GSAVDL
Trigger: CAGATCTACAGCAGATCCCAACTTTCGTGGGAGAGA...GGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp AGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCTGGCAGATGTCAAAGTaGAGACACTTCAGACAGCGG +
Preference number: 5 (lower is better)
Translates to: SCATAFCHHTKRPLSLDSWQMSK*RHFRQR
Trigger: CCGCTGTCTGAAGTGTCTCAACTTTGACATCTGCCA...GGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp AGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCGAAGAGGTTCCCCTGTaGAAGCATCTTCAGTGGCAT +
Preference number: 5 (lower is better)
Translates to: SCATAFCHHTKRPLSLDSEEVPL*KHLQWH
Trigger: ATGCCACTGAAGATGCTTCAACAGGGGAACCTCTTC...GGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp ACTTCTCTGAGTCCCGTGATTGGGAAAGTCCTGCAGAGAGTGCACCGAGCAGGGGAAGTAACAGTCTCTTaGTGGCTCGGTATTTTGAAA +
Preference number: 5 (lower is better)
Translates to: TSLSPVIGKVLQRVHRAGEVTVS*WLGILK
Trigger: TTTCAAAATACCGAGCCACAAAGAGACTGTTACTTC...CCCTGCTCGGTGCACTCTCTGCAGGACTTTCCCAATCACGGGACTCAGAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS GCA 90 bp ACTTTCTGTGGCATCTTTTGTGTTTGGCTTTGTGCCCTGGTGCTGTaGAAAGTGGTCTCTGGTGATTCTGGATTTCGCAGAGCATGCTCT +
Preference number: 5 (lower is better)
Translates to: TFCGIFCVWLCALVL*KVVSGDSGFRRACS
Trigger: AGAGCATGCTCTGCGAAATCCAGAATCACCAGAGACCACTTTGCACAGCACCAGGGCACAAAGCCAAACACAAAAGATGCCACAGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS GCA 90 bp AGACATTCTTTCAGGTACAGGTATAGGCTTGGAGGCACCTGTGGCTaGTGTTTCCATTGGTCCAGTTGGCCTTACATCTGCTGTTCCTTT +
Preference number: 5 (lower is better)
Translates to: RHSFRYRYRLGGTCG*CFHWSSWPYICCSF
Trigger: AAAGGAACAGCAGATGTAAGGCCAACTGGACCAATGGAAACAGCAGCCACAGGTGCCTCCAAGCCTATACCTGTACCTGAAAGAATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674258.1
CDS CCA 90 bp AGGTACAGGTATAGGCTTGGAGGCACCTGTGGCTGCTGTTTCCATTaGTCCAGTTGGCCTTACATCTGCTGTTCCTTTAGAACTCTTGTA +
Preference number: 5 (lower is better)
Translates to: RYRYRLGGTCGCCFH*SSWPYICCSFRTLV
Trigger: TACAAGAGTTCTAAAGGAACAGCAGATGTAAGGCCAACTGGACCAATGGAAACAGCAGCCACAGGTGCCTCCAAGCCTATACCTGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674258.1
CDS-3UTR CAA 90 bp CTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCGGGTGGCTGCAACCTaGCCTGTAGGTCCCGTCTTA +
Preference number: 5 (lower is better)
Translates to: LLIQLCNCILSSHQEAFERVAAT*PVGPVL
Trigger: TAAGACGGGACCTACAGGCAAGGTTGCAGCCACCCG...CTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp GCAGATGTCAAAGTTGAGACACTTCAGACAGCGGTATCTCCAAATCTAGCTCTCGAGTCTGTGCCTTGTTaGCAGTTGTCTGCACAGGGA +
Preference number: 5 (lower is better)
Translates to: ADVKVETLQTAVSPNLALESVPC*QLSAQG
Trigger: TCCCTGTGCAGACAACTGCAAACAAGGCACAGACTC...GAGAGCTAGATTTGGAGATACCGCTGTCTGAAGTGTCTCAACTTTGACATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS CCA 90 bp TATAGGCTTGGAGGCACCTGTGGCTGCTGTTTCCATTGGTCCAGTTaGCCTTACATCTGCTGTTCCTTTAGAACTCTTGTACTGAATGGA +
Preference number: 5 (lower is better)
Translates to: YRLGGTCGCCFHWSS*PYICCSFRTLVLNG
Trigger: TCCATTCAGTACAAGAGTTCTAAAGGAACAGCAGATGTAAGGCCAACTGGACCAATGGAAACAGCAGCCACAGGTGCCTCCAAGCCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674258.1
CDS-3UTR CAA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGAACAGAAAGGGAGTGCTaGCGAGCTTCCCAGAAACTT +
Preference number: 5 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGTEREC*RASQKL
Trigger: AAGTTTCTGGGAAGCTCGCAAGCACTCCCTTTCTGT...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS TCA 90 bp GTGACTTCTGTCAACCTCATCAAGCTTAGGAAGAGGTTCCCCTGTTaGAGCATCTTCAGTGGCATTCTTGATCTGCAAATAATCCCCTCC +
Preference number: 5 (lower is better)
Translates to: VTSVNLIKLRKRFPC*SIFSGILDLQIIPS
Trigger: GGAGGGGATTATTTGCAGATCAAGAATGCCACTGAAGATGCTTCAACAGGGGAACCTCTTCCTAAGCTTGATGAGGTTGACAGAAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS-3UTR CAA 90 bp AGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCAGAAAACCTGTTCCTTaGCTGTTGTACATTGTCGTG +
Preference number: 5 (lower is better)
Translates to: SCATAFCHHTKRPLSLDSRKPVP*LLYIVV
Trigger: CACGACAATGTACAACAGCAAAGGAACAGGTTTTCT...GGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp TTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCATTTTCTGTGGCATCTTTaGTGTTTGGCTTTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: LCNCILSSHQEAFEPGLHFLWHL*CLALCP
Trigger: AGGGCACAAAGCCAAACACAAAAGATGCCACAGAAA...ATGGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGATTGTGCAACTGCATTTaGTCATCACACCAAGAGGCC +
Preference number: 5 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGLCNCI*SSHQEA
Trigger: GGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAA...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp TTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCATAGGAATTTTTCTTCTTaGATTGCTGGGCTCAACACC +
Preference number: 5 (lower is better)
Translates to: LCNCILSSHQEAFEPGLHRNFSS*IAGLNT
Trigger: GGTGTTGAGCCCAGCAATCAAAGAAGAAAAATTCCT...ATGGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp AGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCTTGGAACCTTTTCAGTaGAAGAATGGTCAACCTTGT +
Preference number: 5 (lower is better)
Translates to: SCATAFCHHTKRPLSLDSLEPFQ*KNGQPC
Trigger: ACAAGGTTGACCATTCTTCAACTGAAAAGGTTCCAA...GGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp CTGCGGCTTGCTAATCATGTAGGTTATTTAACTTCTCTGAGTCCCGTGATTGGGTCTCAAATCTGCTTTTaGCTCCAGGTGGAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: LRLANHVGYLTSLSPVIGSQICF*LQVERR
Trigger: TCTTCTCTCCACCTGGAGCAAAAAGCAGATTTGAGA...CCCAATCACGGGACTCAGAGAAGTTAAATAACCTACATGATTAGCAAGCCGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS-3UTR CAA 90 bp AATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTGAGTGCCTGAGAAAGTaGCTGCACAGAAAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: NSFNTVVQLHFVITPRGLECLRK*LHRKGV
Trigger: CACTCCCTTTCTGTGCAGCAACTTTCTCAGGCACTC...AAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp CTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGTTCCTTTGCTGTaGTACATTGTCGTGAGAAGG +
Preference number: 5 (lower is better)
Translates to: LLIQLCNCILSSHQEAFEPVPLL*YIVVRR
Trigger: CCTTCTCACGACAATGTACAACAGCAAAGGAACAGG...CTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp ATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGCCTGGAGGAGGTGTATATAGCTaGCAACTTGTCTTTGTATTG +
Preference number: 5 (lower is better)
Translates to: IQLCNCILSSHQEAFEPGGGVYS*QLVFVL
Trigger: CAATACAAAGACAAGTTGCAAGCTATATACACCTCC...TCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp AATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTCTTTTGTGTTTGGCTTaGTGCCCTGGTGCTGTGCAA +
Preference number: 5 (lower is better)
Translates to: NSFNTVVQLHFVITPRGLLLCLA*CPGAVQ
Trigger: TTGCACAGCACCAGGGCACAAAGCCAAACACAAAAG...AAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp AATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGGCATCTTTTGTGTTaGGCTTTGTGCCCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: NSFNTVVQLHFVITPRGLWHLLC*ALCPGA
Trigger: AGCACCAGGGCACAAAGCCAAACACAAAAGATGCCA...AAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp CTTAATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCTCAGCAGGAACCATTTaGGGGATGTCCTGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: LNSFNTVVQLHFVITPRGSAGTI*GMSCFS
Trigger: ACTGAAGCAGGACATCCCCAAAATGGTTCCTGCTGA...GCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp CTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGTCATCCTTTCTCTCCTaGATGTTACCTGCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LLIQLCNCILSSHQEAFESSFLS*MLPASF
Trigger: GAAAGAGGCAGGTAACATCAAGGAGAGAAAGGATGA...CTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS TCA 90 bp TGTTGTAGCTTGGTCCATAGACTATCCTGGTTGGTTTTGAGTTTGTaGATCCTTGTTTCAAATCGACAAATTCTTTCTTCCTGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: CCSLVHRLSWLVLSL*ILVSNRQILSSWEV
Trigger: CACCTCCCAGGAAGAAAGAATTTGTCGATTTGAAACAAGGATTCACAAACTCAAAACCAACCAGGATAGTCTATGGACCAAGCTACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS-3UTR CAA 90 bp AATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTAAAGAGCTCGGTATTTaGAAAGAGGGCTGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: NSFNTVVQLHFVITPRGLKELGI*KEGCLL
Trigger: CAGGAGACAGCCCTCTTTCAAAATACCGAGCTCTTT...AAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp CTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTTGAGAATAATCCCCTCCCTTaGGAACCTTTTCAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: LLIQLCNCILSSHQEAFENNPLP*EPFQLK
Trigger: CTTCAACTGAAAAGGTTCCAAAGGGAGGGGATTATT...CTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp CTTAATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTATCTGTTGTAGCTaGGTCCATAGACTATCCTGG +
Preference number: 5 (lower is better)
Translates to: LNSFNTVVQLHFVITPRGLICCS*VHRLSW
Trigger: CCAGGATAGTCTATGGACCAAGCTACAACAGATAAG...GCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp CTTAATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCATTGGGCAAGGCAATTaGATCAACAAGGGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: LNSFNTVVQLHFVITPRGIGQGN*INKGRE
Trigger: TTCTCTGCCCTTGTTGATCAAATTGCCTTGCCCAAT...GCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp CTTAATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCGTTTTGTATTCTGCATaGCTGACATCTGAATGCAGT +
Preference number: 5 (lower is better)
Translates to: LNSFNTVVQLHFVITPRGVLYSA*LTSECS
Trigger: ACTGCATTCAGATGTCAGCAATGCAGAATACAAAAC...GCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS-3UTR CAA 90 bp AATTCTTTTAATACAGTTGTGCAACTGCATTTTGTCATCACACCAAGAGGCCTTGATGGCGTTTCTAGATaGAAGGCATCCATAAGTTTT +
Preference number: 5 (lower is better)
Translates to: NSFNTVVQLHFVITPRGLDGVSR*KASISF
Trigger: AAAACTTATGGATGCCTTCAATCTAGAAACGCCATC...AAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS CCA 72 bp GGAGACGCTGGCCTGCGCATGGTGAGGCACACCCTTTaGATTCACCTGGTCCAGCAGCTGCTGCCTTCTCGC +
Preference number: 6 (lower is better)
Translates to: GDAGLRMVRHTL*IHLVQQLLPSR
Trigger: GCGAGAAGGCAGCAGCTGCTGGACCAGGTGAATCCAAAGGGTGTGCCTCACCATGCGCAGGCCAGCGTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674258.1
CDS CCA 72 bp AAGGAGCCTGGCCTGCGCATGGTGAGGCACACCCTTTaGATTCACCTGGTCCAGCAGCTGCTGCCTTCTCGC +
Preference number: 6 (lower is better)
Translates to: KEPGLRMVRHTL*IHLVQQLLPSR
Trigger: GCGAGAAGGCAGCAGCTGCTGGACCAGGTGAATCCAAAGGGTGTGCCTCACCATGCGCAGGCCAGGCTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452335.2
CDS CAA 90 bp TGTACTGAATGGAGACGCTGGCCTGCGCATGGTGAGGCACACCCTTaGGATTCACCTGGTCCAGCAGCTGCTGCCTTCTCGCTGCTTCTT +
Preference number: 6 (lower is better)
Translates to: CTEWRRWPAHGEAHP*DSPGPAAAAFSLLL
Trigger: AAGAAGCAGCGAGAAGGCAGCAGCTGCTGGACCAGGTGAATCCAAAGGGTGTGCCTCACCATGCGCAGGCCAGCGTCTCCATTCAGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674258.1
CDS GCA 72 bp GTGCCTGAGAAAGTTGCTGCACAGAAAGGGAGTGCTTaGGAGCTTCCCAGAAACTTGGACGCAGTAGGACCT +
Preference number: 6 (lower is better)
Translates to: VPEKVAAQKGSA*ELPRNLDAVGP
Trigger: AGGTCCTACTGCGTCCAAGTTTCTGGGAAGCTCGCAAGCACTCCCTTTCTGTGCAGCAACTTTCTCAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452335.2
ENST00000477734.2
ENST00000674258.1
CDS CAA 90 bp ATGCACTTGTCCTGGGTTTTCCTCCCTGGCCTTCTGAAACAGCTCTaGGAGTGCCTGAGAAAGTTGCTGCACAGAAAGGGAGTGCTTGCG +
Preference number: 6 (lower is better)
Translates to: MHLSWVFLPGLLKQL*ECLRKLLHRKGVLA
Trigger: CGCAAGCACTCCCTTTCTGTGCAGCAACTTTCTCAGGCACTCCAAGAGCTGTTTCAGAAGGCCAGGGAGGAAAACCCAGGACAAGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452335.2
ENST00000477734.2
ENST00000674258.1
CDS CCA 72 bp CCAGAGCAGGACTGCTCATTTCAGCAGGAACCATTTTaGGGATGTCCTGCTTCAGTCCCTCCTGATAACTGG +
Preference number: 6 (lower is better)
Translates to: PEQDCSFQQEPF*GCPASVPPDNW
Trigger: CCAGTTATCAGGAGGGACTGAAGCAGGACATCCCCAAAATGGTTCCTGCTGAAATGAGCAGTCCTGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS CAA 90 bp CCTTTGAGCCTGGACTCCATTTCACTTCAAATTGGGCAAGGCAATTaGATCAACAAGGGCAGAGAAGGCCCTGCACACTCGCTGAGCTCC +
Preference number: 6 (lower is better)
Translates to: PLSLDSISLQIGQGN*INKGREGPAHSLSS
Trigger: GGAGCTCAGCGAGTGTGCAGGGCCTTCTCTGCCCTTGTTGATCAAATTGCCTTGCCCAATTTGAAGTGAAATGGAGTCCAGGCTCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS TCA 72 bp GCTTTGTGCCCTGGTGCTGTGCAAAGTGGTCTCTGGTaGTTCTGGATTTCGCAGAGCATGCTCTGCATTTGT +
Preference number: 6 (lower is better)
Translates to: ALCPGAVQSGLW*FWISQSMLCIC
Trigger: ACAAATGCAGAGCATGCTCTGCGAAATCCAGAATCACCAGAGACCACTTTGCACAGCACCAGGGCACAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS CCA 72 bp GAGAGGGTTATTAGGGCAGCGGCCGCAGGCATAAGCTaGAGAAAACCTGTTCCTTTGCTGTTGTACATTGTC +
Preference number: 6 (lower is better)
Translates to: ERVIRAAAAGIS*RKPVPLLLYIV
Trigger: GACAATGTACAACAGCAAAGGAACAGGTTTTCTCCAGCTTATGCCTGCGGCCGCTGCCCTAATAACCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452335.2
ENST00000477734.2
ENST00000674258.1
CDS TCA 72 bp TGGACTCCATTTCACTTCAAATTGGGCAAGGCAATTTaGTCAACAAGGGCAGAGAAGGCCCTGCACACTCGC +
Preference number: 6 (lower is better)
Translates to: WTPFHFKLGKAI*STRAEKALHTR
Trigger: GCGAGTGTGCAGGGCCTTCTCTGCCCTTGTTGATCAAATTGCCTTGCCCAATTTGAAGTGAAATGGAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS GCA 72 bp GGCATCTTTTGTGTTTGGCTTTGTGCCCTGGTGCTGTaGAAAGTGGTCTCTGGTGATTCTGGATTTCGCAGA +
Preference number: 6 (lower is better)
Translates to: GIFCVWLCALVL*KVVSGDSGFRR
Trigger: TCTGCGAAATCCAGAATCACCAGAGACCACTTTGCACAGCACCAGGGCACAAAGCCAAACACAAAAGATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS CCA 72 bp GGAGGCACCTGTGGCTGCTGTTTCCATTGGTCCAGTTaGCCTTACATCTGCTGTTCCTTTAGAACTCTTGTA +
Preference number: 6 (lower is better)
Translates to: GGTCGCCFHWSS*PYICCSFRTLV
Trigger: TACAAGAGTTCTAAAGGAACAGCAGATGTAAGGCCAACTGGACCAATGGAAACAGCAGCCACAGGTGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674258.1
CDS CCA 72 bp TATAGGCTTGGAGGCACCTGTGGCTGCTGTTTCCATTaGTCCAGTTGGCCTTACATCTGCTGTTCCTTTAGA +
Preference number: 6 (lower is better)
Translates to: YRLGGTCGCCFH*SSWPYICCSFR
Trigger: TCTAAAGGAACAGCAGATGTAAGGCCAACTGGACCAATGGAAACAGCAGCCACAGGTGCCTCCAAGCCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674258.1
CDS CAA 72 bp CTGGACTCCATTTCACTTCAAATTGGGCAAGGCAATTaGATCAACAAGGGCAGAGAAGGCCCTGCACACTCG +
Preference number: 6 (lower is better)
Translates to: LDSISLQIGQGN*INKGREGPAHS
Trigger: CGAGTGTGCAGGGCCTTCTCTGCCCTTGTTGATCAAATTGCCTTGCCCAATTTGAAGTGAAATGGAGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS TCA 72 bp TCAGTTGAAGAATGGTCAACCTTGTTCCCCACATTTTaGAAGGAAGAAGATGAAGGACCGGGTGGCTGCAAC +
Preference number: 6 (lower is better)
Translates to: SVEEWSTLFPTF*KEEDEGPGGCN
Trigger: GTTGCAGCCACCCGGTCCTTCATCTTCTTCCTTTCAAAATGTGGGGAACAAGGTTGACCATTCTTCAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS TCA 72 bp GAGGTTCCCCTGTTGAAGCATCTTCAGTGGCATTCTTaGTCTGCAAATAATCCCCTCCCTTTGGAACCTTTT +
Preference number: 6 (lower is better)
Translates to: EVPLLKHLQWHS*SANNPLPLEPF
Trigger: AAAAGGTTCCAAAGGGAGGGGATTATTTGCAGATCAAGAATGCCACTGAAGATGCTTCAACAGGGGAACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS CAA 72 bp AACCTTGCCTGTAGGTCCCGTCTTATCTGTTGTAGCTaGGTCCATAGACTATCCTGGTTGGTTTTGAGTTTG +
Preference number: 6 (lower is better)
Translates to: NLACRSRLICCS*VHRLSWLVLSL
Trigger: CAAACTCAAAACCAACCAGGATAGTCTATGGACCAAGCTACAACAGATAAGACGGGACCTACAGGCAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS TCA 72 bp TATTCTGCATTGCTGACATCTGAATGCAGTGCTCAATaGCAGGATGAGACTTCTGATGGGACTTGCTGTGAA +
Preference number: 6 (lower is better)
Translates to: YSALLTSECSAQ*QDETSDGTCCE
Trigger: TTCACAGCAAGTCCCATCAGAAGTCTCATCCTGTCATTGAGCACTGCATTCAGATGTCAGCAATGCAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS TCA 72 bp GTCAACCTCATCAAGCTTAGGAAGAGGTTCCCCTGTTaGAGCATCTTCAGTGGCATTCTTGATCTGCAAATA +
Preference number: 6 (lower is better)
Translates to: VNLIKLRKRFPC*SIFSGILDLQI
Trigger: TATTTGCAGATCAAGAATGCCACTGAAGATGCTTCAACAGGGGAACCTCTTCCTAAGCTTGATGAGGTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS TCA 72 bp TATCTTCTTTCTCTATGGAGAGCATTAATGGATTCATaGGTCCTCGGCAGTTCATTCCTAGTGCTGACCATG +
Preference number: 6 (lower is better)
Translates to: YLLSLWRALMDS*VLGSSFLVLTM
Trigger: CATGGTCAGCACTAGGAATGAACTGCCGAGGACTCATGAATCCATTAATGCTCTCCATAGAGAAAGAAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674258.1
CDS CAA 90 bp AAGGTAGAAGTCTTAATTCTTTTAATACAGTTGTGCAACTGCATTTaGTCATCACACCAAGAGGCCTTTGAGCCTGGACTCCATTTCACT +
Preference number: 6 (lower is better)
Translates to: KVEVLILLIQLCNCI*SSHQEAFEPGLHFT
Trigger: AGTGAAATGGAGTCCAGGCTCAAAGGCCTCTTGGTGTGATGACAAAATGCAGTTGCACAACTGTATTAAAAGAATTAAGACTTCTACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452335.2
ENST00000674258.1
CDS CAA 90 bp CATGTAGGAGGAACAATCTTTAAATTGAATACTTGCAATGTATCTTaGAAGAGTACTTGCTTTGAAGTAACAGTCTCTTTGTGGCTCGGT +
Preference number: 6 (lower is better)
Translates to: HVGGTIFKLNTCNVS*KSTCFEVTVSLWLG
Trigger: ACCGAGCCACAAAGAGACTGTTACTTCAAAGCAAGTACTCTTCAAAGATACATTGCAAGTATTCAATTTAAAGATTGTTCCTCCTACATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS TCA 72 bp GAATACTTGCAATGTATCTTTGAAGAGTACTTGCTTTaGAGTAACAGTCTCTTTGTGGCTCGGTATTTTGAA +
Preference number: 6 (lower is better)
Translates to: EYLQCIFEEYLL*SNSLFVARYFE
Trigger: TTCAAAATACCGAGCCACAAAGAGACTGTTACTTCAAAGCAAGTACTCTTCAAAGATACATTGCAAGTATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477734.2
CDS GCA 72 bp AAATTGAATACTTGCAATGTATCTTTGAAGAGTACTTaGTTTGAAGTAACAGTCTCTTTGTGGCTCGGTATT +
Preference number: 6 (lower is better)
Translates to: KLNTCNVSLKST*FEVTVSLWLGI
Trigger: AATACCGAGCCACAAAGAGACTGTTACTTCAAAGCAAGTACTCTTCAAAGATACATTGCAAGTATTCAATTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477734.2