RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DYRK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000127334

Ensembl transcript IDs: ENST00000319833.6, ENST00000344096.4, ENST00000393555.3, ENST00000542503.1, ENST00000543747.1

Found 328 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TACAGTCACGTGTCTAAGTTGTTGCTCGATAAAAACCCAAGCCACTaGCTAGACAGAACTGTAGCAGTTGAGCTGAGTATAATTACAATT +
Preference number: 1 (lower is better)
Translates to: YSHVSKLLLDKNPSH*LDRTVAVELSIITI
Trigger: AATTGTAATTATACTCAGCTCAACTGCTACAGTTCTGTCTAGGCAGTGGCTTGGGTTTTTATCGAGCAACAACTTAGACACGTGACTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR GCA 90 bp GGCAGTCATGAAGTAATCAGTGGCCTGCCACTGATGTTATTATTCTaGCACACTAAATACAGTAAGGCTCATTGTACTTTTAGAACACAA +
Preference number: 1 (lower is better)
Translates to: GSHEVISGLPLMLLF*HTKYSKAHCTFRTQ
Trigger: TTGTGTTCTAAAAGTACAATGAGCCTTACTGTATTTAGTGTGGCAGAATAATAACATCAGTGGCAGGCCACTGATTACTTCATGACTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR GCA 90 bp AATGAGAAGTCACTCTCTTACAAATTAACTGAGGGTGTGTGCACATaGATTAAGTTATTAGGTGCACTTAGACACTACGATGCTCTAGTC +
Preference number: 1 (lower is better)
Translates to: NEKSLSYKLTEGVCT*IKLLGALRHYDALV
Trigger: GACTAGAGCATCGTAGTGTCTAAGTGCACCTAATAACTTAATGCATGTGCACACACCCTCAGTTAATTTGTAAGAGAGTGACTTCTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR GCA 90 bp AATAACAATGAGAAGTCACTCTCTTACAAATTAACTGAGGGTGTGTaGACATGCATTAAGTTATTAGGTGCACTTAGACACTACGATGCT +
Preference number: 1 (lower is better)
Translates to: NNNEKSLSYKLTEGV*TCIKLLGALRHYDA
Trigger: AGCATCGTAGTGTCTAAGTGCACCTAATAACTTAATGCATGTGCACACACCCTCAGTTAATTTGTAAGAGAGTGACTTCTCATTGTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR CCA 90 bp GATTACAACCTAAGCCTCAAACTGCAATGTTTTTGTAGTCAACTTTaGAGCAAGTCACTTCAGTTTCCTCAAGTATCAAATGAGGATAAT +
Preference number: 1 (lower is better)
Translates to: DYNLSLKLQCFCSQL*SKSLQFPQVSNEDN
Trigger: ATTATCCTCATTTGATACTTGAGGAAACTGAAGTGACTTGCTCCAAAGTTGACTACAAAAACATTGCAGTTTGAGGCTTAGGTTGTAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR CAA 90 bp GGCCCAGGCTATGACGAGGCAATTGGGAACTCTTATGGCATTCCCTaGTTTAAGCATATCCCAGTATTGATGCAGGGAGCCACACTAAGT +
Preference number: 2 (lower is better)
Translates to: GPGYDEAIGNSYGIP*FKHIPVLMQGATLS
Trigger: ACTTAGTGTGGCTCCCTGCATCAATACTGGGATATGCTTAAACAAGGGAATGCCATAAGAGTTCCCAATTGCCTCGTCATAGCCTGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CCA 90 bp AGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCATGCTACACCTGTGCATaGACCTGGAGCATGGAGGGA +
Preference number: 2 (lower is better)
Translates to: RQDNTVLFLDLKTAQTSPCYTCA*TWSMEG
Trigger: TCCCTCCATGCTCCAGGTCCATGCACAGGTGTAGCA...TGGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR GCA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCGACATGCTACACCTGTaGATGGACCTGGAGCATGGA +
Preference number: 2 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPDMLHL*MDLEHG
Trigger: TCCATGCTCCAGGTCCATGCACAGGTGTAGCATGTC...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR GCA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCAACGGAAGCAGGACATaGTACACCTGTGCATGGACC +
Preference number: 2 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPNGSRT*YTCAWT
Trigger: GGTCCATGCACAGGTGTAGCATGTCCTGCTTCCGTT...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CCA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGGAGAGAACCTTACAGTaGCACCTGAAAAGTGTGAAC +
Preference number: 2 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLERTLQ*HLKSVN
Trigger: GTTCACACTTTTCAGGTGCCACTGTAAGGTTCTCTC...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CCA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGGAGGAATGCTATCTCTaGGGTTCTTCTAATGATACG +
Preference number: 2 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLEECYL*GSSNDT
Trigger: CGTATCATTAGAAGAACCCCAGAGATAGCATTCCTC...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CCA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCCCATCATTAAGAGGCTaGTGGTCTTACAAAGCCACC +
Preference number: 2 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPPSLRG*WSYKAT
Trigger: GGTGGCTTTGTAAGACCACCAGCCTCTTAATGATGG...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR CAA 90 bp TCAGTACACACAGTTGCAGCATATTACAGTCACGTGTCTAAGTTGTaGCTCGATAAAAACCCAAGCCACTGCCTAGACAGAACTGTAGCA +
Preference number: 2 (lower is better)
Translates to: SVHTVAAYYSHVSKL*LDKNPSHCLDRTVA
Trigger: TGCTACAGTTCTGTCTAGGCAGTGGCTTGGGTTTTTATCGAGCAACAACTTAGACACGTGACTGTAATATGCTGCAACTGTGTGTACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCAACCGGAAACTTTCTTaGCCTCACTGGGGACCACGC +
Preference number: 2 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFNRKLS*PHWGPR
Trigger: GCGTGGTCCCCAGTGAGGCCAAGAAAGTTTCCGGTT...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR CAA 90 bp ATTGGGAACTCTTATGGCATTCCCTTGTTTAAGCATATCCCAGTATaGATGCAGGGAGCCACACTAAGTAATTCCTTGGCTGTTGGTAAC +
Preference number: 2 (lower is better)
Translates to: IGNSYGIPLFKHIPV*MQGATLSNSLAVGN
Trigger: GTTACCAACAGCCAAGGAATTACTTAGTGTGGCTCCCTGCATCAATACTGGGATATGCTTAAACAAGGGAATGCCATAAGAGTTCCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR TCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATAATGCGTGGCAGTCATaGAGTAATCAGTGGCCTGCC +
Preference number: 2 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHNAWQS*SNQWPA
Trigger: GGCAGGCCACTGATTACTTCATGACTGCCACGCATT...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CCA 90 bp ACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAACAATCAACCTGTGCATGGACCTaGAGCATGGAGGGAAAAGGA +
Preference number: 2 (lower is better)
Translates to: TKLSVTLPDKVSFPQKQSTCAWT*SMEGKG
Trigger: TCCTTTTCCCTCCATGCTCCAGGTCCATGCACAGGT...TGATTGTTTTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR CAA 90 bp TTTTCAGTACACACAGTTGCAGCATATTACAGTCACGTGTCTAAGTaGTTGCTCGATAAAAACCCAAGCCACTGCCTAGACAGAACTGTA +
Preference number: 2 (lower is better)
Translates to: FSVHTVAAYYSHVSK*LLDKNPSHCLDRTV
Trigger: TACAGTTCTGTCTAGGCAGTGGCTTGGGTTTTTATCGAGCAACAACTTAGACACGTGACTGTAATATGCTGCAACTGTGTGTACTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR TCA 90 bp ACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAACAATCATCAGTGGCCTGCCACTaGTGTTATTATTCTGCCACA +
Preference number: 2 (lower is better)
Translates to: TKLSVTLPDKVSFPQKQSSVACH*CYYSAT
Trigger: TGTGGCAGAATAATAACATCAGTGGCAGGCCACTGA...TGATTGTTTTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR GCA 90 bp AGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCAAACTCTCAGTTACTTTaGCAGATAAAGTGTCATTCC +
Preference number: 2 (lower is better)
Translates to: RQDNTVLFLDLKTAQTSPNSQLL*QIKCHS
Trigger: GGAATGACACTTTATCTGGCAAAGTAACTGAGAGTT...TGGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR GCA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCAATAAAATAGAGGAATaGTATCTCTGGGGTTCTTCT +
Preference number: 2 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPNKIEE*YLWGSS
Trigger: AGAAGAACCCCAGAGATAGCATTCCTCTATTTTATT...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR TCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATATGGCCCAATGCTACTaGTGCCTAAAGTGTTTTCTA +
Preference number: 2 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHMAQCY*CLKCFL
Trigger: TAGAAAACACTTTAGGCATCAGTAGCATTGGGCCAT...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCTCATTAAGAGGCTGGTaGTCTTACAAAGCCACCAAA +
Preference number: 2 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFSLRGW*SYKATK
Trigger: TTTGGTGGCTTTGTAAGACCACCAGCCTCTTAATGA...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR TCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCAACAATGGTAACCTGTaGGACCAAAAACTGTTTCCA +
Preference number: 2 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFNNGNL*DQKLFP
Trigger: TGGAAACAGTTTTTGGTCTCACAGGTTACCATTGTT...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CCA 90 bp ACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAACAATCATCTGTATTAACAGTCTaGGATACACAGCTGAAGGAA +
Preference number: 2 (lower is better)
Translates to: TKLSVTLPDKVSFPQKQSSVLTV*DTQLKE
Trigger: TTCCTTCAGCTGTGTATCCCAGACTGTTAATACAGA...TGATTGTTTTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATCTGCTAAATCTTCTTTaGAACTATGGAAATCCCCAC +
Preference number: 2 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHLLNLL*NYGNPH
Trigger: GTGGGGATTTCCATAGTTCCAAAGAAGATTTAGCAG...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCGAAAAGAATGAAGACTaGTGGGGAATAATTGACAGG +
Preference number: 2 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFEKNED*WGIIDR
Trigger: CCTGTCAATTATTCCCCACCAGTCTTCATTCTTTTC...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR TCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATAGCAACTCTGTAATATaGGGCTTCTTTACAAAACAG +
Preference number: 2 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHSNSVI*GFFTKQ
Trigger: CTGTTTTGTAAAGAAGCCTCATATTACAGAGTTGCT...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR GCA 90 bp ATTCTTTTACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAGAAGACAAACTAAATaGAAGCAACAGACGTGTGGT +
Preference number: 2 (lower is better)
Translates to: ILLPNSQLLCQIKCHSHKRRQTK*KQQTCG
Trigger: ACCACACGTCTGTTGCTTGCATTTAGTTTGTCTTCT...TTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGTAAAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATATATTTAATGTTAAGTaGCGACAGCAGCATCTCACA +
Preference number: 2 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHIFNVK*RQQHLT
Trigger: TGTGAGATGCTGCTGTCGCCACTTAACATTAAATAT...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR GCA 72 bp ATTTATGAAAAACGGAAGCAGGACATGCTACACCTGTaGATGGACCTGGAGCATGGAGGGAAAAGGAGGGCC +
Preference number: 3 (lower is better)
Translates to: IYEKRKQDMLHL*MDLEHGGKRRA
Trigger: GGCCCTCCTTTTCCCTCCATGCTCCAGGTCCATGCACAGGTGTAGCATGTCCTGCTTCCGTTTTTCATAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR CCA 72 bp TACCAGAACTTGTGCAGAGAAAAGAATGAAGACTGGTaGGGAATAATTGACAGGTTCTGCTCCCCCAGCTTA +
Preference number: 3 (lower is better)
Translates to: YQNLCREKNEDW*GIIDRFCSPSL
Trigger: TAAGCTGGGGGAGCAGAACCTGTCAATTATTCCCCACCAGTCTTCATTCTTTTCTCTGCACAAGTTCTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CAA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGGTCAAACCATTTAACTaGAGGTTGAACTTTTCCTCC +
Preference number: 3 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLVKPFN*RLNFSS
Trigger: GGAGGAAAAGTTCAACCTCAAGTTAAATGGTTTGAC...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR TCA 72 bp AAGATTAGCAGTAACAAAAATCTATGGCCCAGGCTATaGCGAGGCAATTGGGAACTCTTATGGCATTCCCTT +
Preference number: 3 (lower is better)
Translates to: KISSNKNLWPRL*RGNWELLWHSL
Trigger: AAGGGAATGCCATAAGAGTTCCCAATTGCCTCGTCATAGCCTGGGCCATAGATTTTTGTTACTGCTAATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR GCA 72 bp AAGAATGAAGACTGGTGGGGAATAATTGACAGGTTCTaGTCCCCCAGCTTAACTATCATTGTGAAGGTTAAA +
Preference number: 3 (lower is better)
Translates to: KNEDWWGIIDRF*SPSLTIIVKVK
Trigger: TTTAACCTTCACAATGATAGTTAAGCTGGGGGAGCAGAACCTGTCAATTATTCCCCACCAGTCTTCATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CAA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCTCTTGCACCACTCTGTaGTTCCACTGCTGTAGCAAT +
Preference number: 3 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFSCTTL*FHCCSN
Trigger: ATTGCTACAGCAGTGGAACAACAGAGTGGTGCAAGA...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CAA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCCACGTGTCTAAGTTGTaGCTCGATAAAAACCCAAGC +
Preference number: 3 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFHVSKL*LDKNPS
Trigger: GCTTGGGTTTTTATCGAGCAACAACTTAGACACGTG...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR GCA 72 bp GAGAAGTCACTCTCTTACAAATTAACTGAGGGTGTGTaGACATGCATTAAGTTATTAGGTGCACTTAGACAC +
Preference number: 3 (lower is better)
Translates to: EKSLSYKLTEGV*TCIKLLGALRH
Trigger: GTGTCTAAGTGCACCTAATAACTTAATGCATGTGCACACACCCTCAGTTAATTTGTAAGAGAGTGACTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CAA 90 bp ATTCTTTTACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAACCACTAAAAGCTGCTTaGCCGGCTTTTAGAATGTCA +
Preference number: 3 (lower is better)
Translates to: ILLPNSQLLCQIKCHSHKPLKAA*PAFRMS
Trigger: TGACATTCTAAAAGCCGGCAAAGCAGCTTTTAGTGG...TTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGTAAAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CAA 90 bp ACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAACAATCAAACGTGTTGTTAACATaGGCCTTACTGAACAGCCAA +
Preference number: 3 (lower is better)
Translates to: TKLSVTLPDKVSFPQKQSNVLLT*ALLNSQ
Trigger: TTGGCTGTTCAGTAAGGCCAATGTTAACAACACGTT...TGATTGTTTTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CAA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATACTACCCAAAACCTATaGTCCAAACAGGCAGAAATC +
Preference number: 3 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHTTQNL*SKQAEI
Trigger: GATTTCTGCCTGTTTGGACAATAGGTTTTGGGTAGT...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR GCA 72 bp TCACTCTCTTACAAATTAACTGAGGGTGTGTGCACATaGATTAAGTTATTAGGTGCACTTAGACACTACGAT +
Preference number: 3 (lower is better)
Translates to: SLSYKLTEGVCT*IKLLGALRHYD
Trigger: ATCGTAGTGTCTAAGTGCACCTAATAACTTAATGCATGTGCACACACCCTCAGTTAATTTGTAAGAGAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CAA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCATAGAGCTATCCATTTaGCATTCTAAACCCTCTCCA +
Preference number: 3 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFIELSI*HSKPSP
Trigger: TGGAGAGGGTTTAGAATGCAAAATGGATAGCTCTAT...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR-3UTR CAA 90 bp AACTGTAGGATTATTATTAAAGAACTTAACCGGAAACTTTCTTGGCCTCACTGGATCATACTAGAAAATTaGGAGGAACACACACGTTTC +
Preference number: 3 (lower is better)
Translates to: NCRIIIKELNRKLSWPHWIILEN*EEHTRF
Trigger: GAAACGTGTGTGTTCCTCCAAATTTTCTAGTATGAT...CCAGTGAGGCCAAGAAAGTTTCCGGTTAAGTTCTTTAATAATAATCCTACAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR GCA 72 bp TCTTCTGGAACATGTGATACAATCATAATATATTCTTaGTGCTCCTTAACGACAGATGACTTAATACTCCTA +
Preference number: 3 (lower is better)
Translates to: SSGTCDTIIIYS*CSLTTDDLILL
Trigger: TAGGAGTATTAAGTCATCTGTCGTTAAGGAGCAGCAAGAATATATTATGATTGTATCACATGTTCCAGAAGA
35% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGCGCCGCCGGTCCTGCTaGTACTTCTGGCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLRRRSC*YFWRPP
Trigger: CGGCGGCCGCCAGAAGTAGCAGCAGGACCGGCGGCG...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCTCCGGCCCGTGCACATaGCTCGCCCTCCCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPSGPCT*LALPCA
Trigger: CGCGCAGGGGAGGGCGAGGCATGTGCACGGGCCGGA...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTATCCGGCCCGTGCACATaGCTCGCCCTCCCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLSGPCT*LALPCA
Trigger: CGCGCAGGGGAGGGCGAGGCATGTGCACGGGCCGGA...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAGCACCCTCCGGCCCGTaGACATGCCTCGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLAPSGP*TCLALP
Trigger: GGGGAGGGCGAGGCATGTGCACGGGCCGGAGGGTGC...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTATCTTCCTCGGGCGGCTaGAGCACCCTCCGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLSSSGG*STLRPV
Trigger: CACGGGCCGGAGGGTGCTGCAGCCGCCCGAGGAAGA...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATCGCCGCCGGTCCTGCTaGTACTTCTGGCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNRRRSC*YFWRPP
Trigger: CGGCGGCCGCCAGAAGTAGCAGCAGGACCGGCGGCG...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCGCCAATCGTGTGGGCTaGGGCGGCAGCGTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPANRVG*GGSVAG
Trigger: GCCAGCAACGCTGCCGCCGCAGCCCACACGATTGGC...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTACTCCTCAGCCAGGGGTaGCGCAAAGCCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLLLSQG*RKAWPG
Trigger: CCCAGGCCAGGCTTTGCGGCACCCCTGGCTGAGGAG...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATAGGGGCGCGGGGAGCTaGAAGCGCTGCGAGGACCGA +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNRGAGS*KRCEDR
Trigger: TCGGTCCTCGCAGCGCTTCCAGCTCCCCGCGCCCCT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGTCGCCGCCTCGCGTCTaGTACAGCCAGACACACACA +
Preference number: 4 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLSPPRV*YSQTHT
Trigger: TGTGTGTGTCTGGCTGTAGCAGACGCGAGGCGGCGA...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCGGGTGCCGCAAAGCCTaGCCTGGGGTCATGCGCACT +
Preference number: 4 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPGCRKA*PGVMRT
Trigger: AGTGCGCATGACCCCAGGCCAGGCTTTGCGGCACCC...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTACCCGGTGGGAGGCTTTaGCAACCGCCTCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLPGGRL*QPPPQP
Trigger: TGGCTGAGGAGGCGGTTGCCAAAGCCTCCCACCGGG...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR TCA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCACCTGGATCTGTCCGTaGGCGTGGCTGCCGACATGC +
Preference number: 4 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPTWICP*AWLPTC
Trigger: GCATGTCGGCAGCCACGCTCACGGACAGATCCAGGT...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAACCTGGATCTGTCCGTaGGCGTGGCTGCCGACATGC +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLTWICP*AWLPTC
Trigger: GCATGTCGGCAGCCACGCTCACGGACAGATCCAGGT...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATCTGCGGCGGCAGCGTTaGTGGCCCGGAGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHLRRQR*WPGEAA
Trigger: TGCCGCCTCTCCGGGCCAGCAACGCTGCCGCCGCAG...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGCCTGCCGTCTATGAATaGTGTCCAGCTGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLPAVYE*CPAAAL
Trigger: CAGAGCGGCAGCTGGACAGCATTCATAGACGGCAGG...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCGCACCCTCCGGCCCGTaGACATGCCTCGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFAPSGP*TCLALP
Trigger: GGGGAGGGCGAGGCATGTGCACGGGCCGGAGGGTGC...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATACACACACAGTCCACTaGATCCCCTCGGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNTHTVH*IPSAGA
Trigger: GGCCCCGGCCGAGGGGATGCAGTGGACTGTGTGTGT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATAATGCATTTCAGGGCTaGCGTCGCCGCCGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNNAFQG*RRRRRS
Trigger: GGACCGGCGGCGGCGACGGCAGCCCTGAAATGCATT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATCGTTCCCCCACTCTCTaGTCTCCGGTGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNRSPTL*SPVGPS
Trigger: TGAGGGGCCCACCGGAGAGCAGAGAGTGGGGGAACG...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCCAGCTGCCGCTCTaGCACCACTGGCAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNVQLPL*HHWQAR
Trigger: ACGGGCTTGCCAGTGGTGCCAGAGCGGCAGCTGGAC...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTACTCTCTGCTCTCCGGTaGGCCCCTCAGTTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLLSALR*APQFPP
Trigger: AGGGGGAAACTGAGGGGCCCACCGGAGAGCAGAGAG...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGGGTGCCGCAAAGCCTaGCCTGGGGTCATGCGCACT +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNGCRKA*PGVMRT
Trigger: AGTGCGCATGACCCCAGGCCAGGCTTTGCGGCACCC...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR TCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATCTCCCCTGCCGTCTATaGATGCTGTCCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNLPCRL*MLSSCR
Trigger: GCGGCAGCTGGACAGCATTCATAGACGGCAGGGGAG...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTATCGCCGCCTCGCGTCTaGTACAGCCAGACACACACA +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLSPPRV*YSQTHT
Trigger: TGTGTGTGTCTGGCTGTAGCAGACGCGAGGCGGCGA...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATGGACCGAAGACCGCCTaGCTCGGGAGCCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHGPKTA*LGSLSR
Trigger: CCGGGAGAGGCTCCCGAGCCAGGCGGTCTTCGGTCC...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp ACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAACAATCAAGGGGCGCGGGGAGCTaGAAGCGCTGCGAGGACCGA +
Preference number: 4 (lower is better)
Translates to: TKLSVTLPDKVSFPQKQSRGAGS*KRCEDR
Trigger: TCGGTCCTCGCAGCGCTTCCAGCTCCCCGCGCCCCT...TGATTGTTTTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAACGTTTTCTCCCCGGTaGGAGGCTTTGGCAACCGCC +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLTFSPR*EALATA
Trigger: GGCGGTTGCCAAAGCCTCCCACCGGGGAGAAAACGT...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp AGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCAGTCCGTGAGCGTGGCTaGCGACATGCAGGTGATCAT +
Preference number: 4 (lower is better)
Translates to: RQDNTVLFLDLKTAQTSPVRERG*RHAGDH
Trigger: ATGATCACCTGCATGTCGGCAGCCACGCTCACGGAC...TGGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTACCTGCCGTCTATGAATaGTGTCCAGCTGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLPAVYE*CPAAAL
Trigger: CAGAGCGGCAGCTGGACAGCATTCATAGACGGCAGG...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp TGTGCATATATAAGCTTACTTATCCTAATCTGTACTACCCAAAACCTATTGTCCTCTTCCTCGGGCGGCTaGAGCACCCTCCGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: CAYISLLILICTTQNLLSSSSGG*STLRPV
Trigger: CACGGGCCGGAGGGTGCTGCAGCCGCCCGAGGAAGA...GGACAATAGGTTTTGGGTAGTACAGATTAGGATAAGTAAGCTTATATATGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATCTCCTCAGCCAGGGGTaGCGCAAAGCCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHLLSQG*RKAWPG
Trigger: CCCAGGCCAGGCTTTGCGGCACCCCTGGCTGAGGAG...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AACTGTAGGATTATTATTAAAGAACTTAACCGGAAACTTTCTTGGCCTCACTGGCTGCCGCCAATCGTGTaGGCTGCGGCGGCAGCGTTG +
Preference number: 4 (lower is better)
Translates to: NCRIIIKELNRKLSWPHWLPPIV*AAAAAL
Trigger: CAACGCTGCCGCCGCAGCCCACACGATTGGCGGCAG...CCAGTGAGGCCAAGAAAGTTTCCGGTTAAGTTCTTTAATAATAATCCTACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTACGGCCGAAGGTTTCCTaGTTAACATGGCCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLRPKVS*LTWPLE
Trigger: CTCCAGCGGCCATGTTAACCAGGAAACCTTCGGCCG...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR TCA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGCATTTGGTTGTGTCGTaGGCACTGTCCGCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLHLVVS*ALSACY
Trigger: GTAACAAGCGGACAGTGCTCACGACACAACCAAATG...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAGACCACAGAGCCATCTaGGAGAGTCGTGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLDHRAI*ESRDSA
Trigger: TGCACTGTCACGACTCTCTCAGATGGCTCTGTGGTC...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCCGTGAGCGTGGCTaGCGACATGCAGGTGATCAT +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNVRERG*RHAGDH
Trigger: ATGATCACCTGCATGTCGGCAGCCACGCTCACGGAC...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp AACTGTAGGATTATTATTAAAGAACTTAACCGGAAACTTTCTTGGCCTCACTGGACACACACAGTCCACTaGATCCCCTCGGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: NCRIIIKELNRKLSWPHWTHTVH*IPSAGA
Trigger: GGCCCCGGCCGAGGGGATGCAGTGGACTGTGTGTGT...CCAGTGAGGCCAAGAAAGTTTCCGGTTAAGTTCTTTAATAATAATCCTACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp AGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCACGCTGGAGAGGAAAATaGATTTCAGGGCTGCCGTCG +
Preference number: 4 (lower is better)
Translates to: RQDNTVLFLDLKTAQTSPRWRGK*ISGLPS
Trigger: CGACGGCAGCCCTGAAATGCATTTTCCTCTCCAGCG...TGGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCGTCCAGCTGCCGCTCTaGCACCACTGGCAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFVQLPL*HHWQAR
Trigger: ACGGGCTTGCCAGTGGTGCCAGAGCGGCAGCTGGAC...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTATGGGCATGCCATACCTaGCCCCAAGGATCACTTCTG +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLWACHT*PQGSLL
Trigger: CAGAAGTGATCCTTGGGGCCAGGTATGGCATGCCCA...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAGGCTCCACATATCAATaGGCATGCCATACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLGSTYQ*ACHTWP
Trigger: GGGCCAGGTATGGCATGCCCATTGATATGTGGAGCC...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR TCA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGCTGCCGACATGCAGGTaGTCATTCATTGTGTGCTTA +
Preference number: 4 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLLPTCR*SFIVCL
Trigger: TAAGCACACAATGAATGATCACCTGCATGTCGGCAG...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp AACTGTAGGATTATTATTAAAGAACTTAACCGGAAACTTTCTTGGCCTCACTGGCTCCCCTGCCGTCTATaGATGCTGTCCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: NCRIIIKELNRKLSWPHWLPCRL*MLSSCR
Trigger: GCGGCAGCTGGACAGCATTCATAGACGGCAGGGGAG...CCAGTGAGGCCAAGAAAGTTTCCGGTTAAGTTCTTTAATAATAATCCTACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTACATCTGAGAGAGTCGTaGCAGTGCAGTAACGGGGAT +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLHLRES*QCSNGD
Trigger: ATCCCCGTTACTGCACTGTCACGACTCTCTCAGATG...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR TCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATCTATGGCCCAGGCTATaGCGAGGCAATTGGGAACTC +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNLWPRL*RGNWEL
Trigger: GAGTTCCCAATTGCCTCGTCATAGCCTGGGCCATAG...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp ATTCTTTTACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAATGCATTTCAGGGCTaGCGTCGCCGCCGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: ILLPNSQLLCQIKCHSHKNAFQG*RRRRRS
Trigger: GGACCGGCGGCGGCGACGGCAGCCCTGAAATGCATT...TTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGTAAAAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATCGCTGGAGAGGAAAATaGATTTCAGGGCTGCCGTCG +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNRWRGK*ISGLPS
Trigger: CGACGGCAGCCCTGAAATGCATTTTCCTCTCCAGCG...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAGCAGCTCAAACGTCATaGAGATGTGGTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLAAQTS*RCGCGR
Trigger: CCTTCCGCAACCACATCTGCATGACGTTTGAGCTGC...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp TGTGCATATATAAGCTTACTTATCCTAATCTGTACTACCCAAAACCTATTGTCCCGTTCCCCCACTCTCTaGTCTCCGGTGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: CAYISLLILICTTQNLLSRSPTL*SPVGPS
Trigger: TGAGGGGCCCACCGGAGAGCAGAGAGTGGGGGAACG...GGACAATAGGTTTTGGGTAGTACAGATTAGGATAAGTAAGCTTATATATGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTATGGACTTTAGAGAGGTaGAGCTCCCCTGCCGTCTAT +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLWTLER*SSPAVY
Trigger: ATAGACGGCAGGGGAGCTCCACCTCTCTAAAGTCCA...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTACTTGTTCAGGTGTCATaGGGGTGGCTTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLLVQVS*GWLSPS
Trigger: GGAAGGTGAAAGCCACCCCCATGACACCTGAACAAG...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATCATAGCCACCATTGTTaGGCCCACCTGTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNHSHHC*AHLSCP
Trigger: AGGGCATGACAGGTGGGCCCAACAATGGTGGCTATG...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp AGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCACCCAAGGATCACTTCTaGAGCCCGGTAAAAACGCGA +
Preference number: 4 (lower is better)
Translates to: RQDNTVLFLDLKTAQTSPPKDHF*SPVKTR
Trigger: TCGCGTTTTTACCGGGCTCCAGAAGTGATCCTTGGG...TGGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTACCCAAGGATCACTTCTaGAGCCCGGTAAAAACGCGA +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLPKDHF*SPVKTR
Trigger: TCGCGTTTTTACCGGGCTCCAGAAGTGATCCTTGGG...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAATCATACAGGCCAGCTaGTCCCCTTCATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLIIQAS*SPSSSP
Trigger: TGGGGAAGATGAAGGGGACCAGCTGGCCTGTATGAT...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR TCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATATCCAGCAGTTTCTGTaGGGGCATGCCCAACAGTTC +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNIQQFL*GHAQQF
Trigger: GAACTGTTGGGCATGCCCTCACAGAAACTGCTGGAT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR TCA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCCAGCATCAGGGGACGTaGGCTCAGCTAACAAGTTTT +
Preference number: 4 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPQHQGT*AQLTSF
Trigger: AAAACTTGTTAGCTGAGCTCACGTCCCCTGATGCTG...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTACAGCATCAGGGGACGTaGGCTCAGCTAACAAGTTTT +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLQHQGT*AQLTSF
Trigger: AAAACTTGTTAGCTGAGCTCACGTCCCCTGATGCTG...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTGTTATCCTTGTCCTaGTTCCGCAGGTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNVLSLS*FRRCSR
Trigger: CCTGGAACACCTGCGGAAGCAGGACAAGGATAACAC...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp AGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCAACATATCAATGGGCATaGCATACCTGGCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: RQDNTVLFLDLKTAQTSPTYQWA*HTWPQG
Trigger: TCCTTGGGGCCAGGTATGGCATGCCCATTGATATGT...TGGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAACATATCAATGGGCATaGCATACCTGGCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLTYQWA*HTWPQG
Trigger: TCCTTGGGGCCAGGTATGGCATGCCCATTGATATGT...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGGTTTCTGTGAGGGCATaGCCAACAGTTCAATCATAC +
Preference number: 4 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLVSVRA*PTVQSY
Trigger: GTATGATTGAACTGTTGGGCATGCCCTCACAGAAAC...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATATCATACAGGCCAGCTaGTCCCCTTCATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNIIQAS*SPSSSP
Trigger: TGGGGAAGATGAAGGGGACCAGCTGGCCTGTATGAT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp TGTGCATATATAAGCTTACTTATCCTAATCTGTACTACCCAAAACCTATTGTCCCTCTCTGCTCTCCGGTaGGCCCCTCAGTTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: CAYISLLILICTTQNLLSLSALR*APQFPP
Trigger: AGGGGGAAACTGAGGGGCCCACCGGAGAGCAGAGAG...GGACAATAGGTTTTGGGTAGTACAGATTAGGATAAGTAAGCTTATATATGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AACTGTAGGATTATTATTAAAGAACTTAACCGGAAACTTTCTTGGCCTCACTGGACGTTTTCTCCCCGGTaGGAGGCTTTGGCAACCGCC +
Preference number: 4 (lower is better)
Translates to: NCRIIIKELNRKLSWPHWTFSPR*EALATA
Trigger: GGCGGTTGCCAAAGCCTCCCACCGGGGAGAAAACGT...CCAGTGAGGCCAAGAAAGTTTCCGGTTAAGTTCTTTAATAATAATCCTACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTACTGCCGACATGCAGGTaGTCATTCATTGTGTGCTTA +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLLPTCR*SFIVCL
Trigger: TAAGCACACAATGAATGATCACCTGCATGTCGGCAG...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR TCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGGGCACCTGCACATATaGTCCCTGGTCATCATCATA +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNGHLHI*SLVIII
Trigger: TATGATGATGACCAGGGATCATATGTGCAGGTGCCC...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR TCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTATGTGGTTGCGGAAGGTaGAATTCTCCAGCATATGGA +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLCGCGR*NSPAYG
Trigger: TCCATATGCTGGAGAATTTCACCTTCCGCAACCACA...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR TCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTATCAGTGGCCTGCCACTaGTGTTATTATTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLSVACH*CYYSAT
Trigger: TGTGGCAGAATAATAACATCAGTGGCAGGCCACTGA...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGCTCTTACAAATTAACTaGGGGTGTGTGCACATGCAT +
Preference number: 4 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLLLQIN*GCVHMH
Trigger: ATGCATGTGCACACACCCTCAGTTAATTTGTAAGAG...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCAAAGCATCCAAGCACTaGAGAATCGAGTGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPKASKH*RIEWAN
Trigger: GTTTGCCCACTCGATTCTGCAGTGCTTGGATGCTTT...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAGTTTCCTGGTTAACATaGCCGCTGGAGAGGAAAATG +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLVSWLT*PLERKM
Trigger: CATTTTCCTCTCCAGCGGCCATGTTAACCAGGAAAC...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATCCACCTGTCATGCCCTaGCGCTTCTTAGCATTTAGA +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNPPVMP*RFLAFR
Trigger: TCTAAATGCTAAGAAGCGCCAGGGCATGACAGGTGG...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTACACTGCAGAATCGAGTaGGCAAACTTGCGAACCAAA +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLHCRIE*ANLRTK
Trigger: TTTGGTTCGCAAGTTTGCCCACTCGATTCTGCAGTG...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAGCTGAATATTCCCATTaGCATCTGTCATCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLAEYSH*HLSSAP
Trigger: TGGCGCAGATGACAGATGCCAATGGGAATATTCAGC...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
3UTR CAA 72 bp CACACAGTTGCAGCATATTACAGTCACGTGTCTAAGTaGTTGCTCGATAAAAACCCAAGCCACTGCCTAGAC +
Preference number: 4 (lower is better)
Translates to: HTVAAYYSHVSK*LLDKNPSHCLD
Trigger: GTCTAGGCAGTGGCTTGGGTTTTTATCGAGCAACAACTTAGACACGTGACTGTAATATGCTGCAACTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR CAA 72 bp TATGACGAGGCAATTGGGAACTCTTATGGCATTCCCTaGTTTAAGCATATCCCAGTATTGATGCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: YDEAIGNSYGIP*FKHIPVLMQGA
Trigger: GGCTCCCTGCATCAATACTGGGATATGCTTAAACAAGGGAATGCCATAAGAGTTCCCAATTGCCTCGTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAGGTGTTCGAAGGCTGTaGGTTTTTGCATGTATTGCT +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLGVRRL*VFACIA
Trigger: AGCAATACATGCAAAAACTCACAGCCTTCGAACACC...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR TCA 90 bp ACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAACAATCAGACCACAGAGCCATCTaGGAGAGTCGTGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: TKLSVTLPDKVSFPQKQSDHRAI*ESRDSA
Trigger: TGCACTGTCACGACTCTCTCAGATGGCTCTGTGGTC...TGATTGTTTTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAAACACTGTCCTCTGCTaGATATTCCCATTGGCATCT +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLNTVLC*IFPLAS
Trigger: AGATGCCAATGGGAATATTCAGCAGAGGACAGTGTT...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGCTCATAGAGGTTCATaGTCAGCAGCTCAAACGTCA +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNAHRGS*SAAQTS
Trigger: TGACGTTTGAGCTGCTGAGCATGAACCTCTATGAGC...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATAAAGCATCCAAGCACTaGAGAATCGAGTGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNKASKH*RIEWAN
Trigger: GTTTGCCCACTCGATTCTGCAGTGCTTGGATGCTTT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAGTTTCTGTGAGGGCATaGCCAACAGTTCAATCATAC +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLVSVRA*PTVQSY
Trigger: GTATGATTGAACTGTTGGGCATGCCCTCACAGAAAC...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGAGACAGATGTATCTTTaGAGAGATGGGTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLRQMYL*RDGFHS
Trigger: AGAATGGAACCCATCTCTGCAAAGATACATCTGTCT...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTATGTTGTAAGCCCATTTaGTTGTGTCGTGAGCACTGT +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLCCKPI*LCREHC
Trigger: ACAGTGCTCACGACACAACCAAATGGGCTTACAACA...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp ATTCTTTTACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAACGGCCGAAGGTTTCCTaGTTAACATGGCCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ILLPNSQLLCQIKCHSHKRPKVS*LTWPLE
Trigger: CTCCAGCGGCCATGTTAACCAGGAAACCTTCGGCCG...TTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGTAAAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATCATAGCCACCATTGTTaGGCCCACCTGTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHHSHHC*AHLSCP
Trigger: AGGGCATGACAGGTGGGCCCAACAATGGTGGCTATG...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCAACGTCATGCAGATGTaGTTGCGGAAGGTGAAATTC +
Preference number: 4 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPNVMQM*LRKVKF
Trigger: GAATTTCACCTTCCGCAACCACATCTGCATGACGTT...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAAACGTCATGCAGATGTaGTTGCGGAAGGTGAAATTC +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLNVMQM*LRKVKF
Trigger: GAATTTCACCTTCCGCAACCACATCTGCATGACGTT...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATCACTGCAGAATCGAGTaGGCAAACTTGCGAACCAAA +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNHCRIE*ANLRTK
Trigger: TTTGGTTCGCAAGTTTGCCCACTCGATTCTGCAGTG...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATTGGGCATGCCATACCTaGCCCCAAGGATCACTTCTG +
Preference number: 4 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHWACHT*PQGSLL
Trigger: CAGAAGTGATCCTTGGGGCCAGGTATGGCATGCCCA...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp ACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAACAATCAGGCTCCACATATCAATaGGCATGCCATACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TKLSVTLPDKVSFPQKQSGSTYQ*ACHTWP
Trigger: GGGCCAGGTATGGCATGCCCATTGATATGTGGAGCC...TGATTGTTTTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp ACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAACAATCAAACCGGAAACTTTCTTaGCCTCACTGGGGACCACGC +
Preference number: 4 (lower is better)
Translates to: TKLSVTLPDKVSFPQKQSNRKLS*PHWGPR
Trigger: GCGTGGTCCCCAGTGAGGCCAAGAAAGTTTCCGGTT...TGATTGTTTTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATACCAGTTTTGTGCGGTaGGGGAAAGACAAGCAGTAT +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNTSFVR*GKDKQY
Trigger: ATACTGCTTGTCTTTCCCCCACCGCACAAAACTGGT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR CAA 72 bp ACAGTTGCAGCATATTACAGTCACGTGTCTAAGTTGTaGCTCGATAAAAACCCAAGCCACTGCCTAGACAGA +
Preference number: 4 (lower is better)
Translates to: TVAAYYSHVSKL*LDKNPSHCLDR
Trigger: TCTGTCTAGGCAGTGGCTTGGGTTTTTATCGAGCAACAACTTAGACACGTGACTGTAATATGCTGCAACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCAATGCGTGGCAGTCATaGAGTAATCAGTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFNAWQS*SNQWPA
Trigger: GGCAGGCCACTGATTACTTCATGACTGCCACGCATT...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATAGAAACAGAGCCAAATaGGACTGCCAAAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNRNRAK*DCQRQD
Trigger: GTCTTGTCTTTGGCAGTCTCATTTGGCTCTGTTTCT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp AGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCACCTCTCCAGGCTAATTaGCAAAGGATAATACCAGAA +
Preference number: 4 (lower is better)
Translates to: RQDNTVLFLDLKTAQTSPPLQAN*QRIIPE
Trigger: TTCTGGTATTATCCTTTGTCAATTAGCCTGGAGAGG...TGGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp ATTCTTTTACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAACTGGTGGGGAATAATTaGCAGGTTCTGCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: ILLPNSQLLCQIKCHSHKLVGNN*QVLLPQ
Trigger: CTGGGGGAGCAGAACCTGTCAATTATTCCCCACCAG...TTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGTAAAAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTATATCCCTGCAATGTCTaGCGAATTACTAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLYPCNV*RITRAS
Trigger: AGATGCTCTAGTAATTCGTCAGACATTGCAGGGATA...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGCTCCTTAACGACAGATaGCTTAATACTCCTAAAATG +
Preference number: 4 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLLLNDR*LNTPKM
Trigger: CATTTTAGGAGTATTAAGTCATCTGTCGTTAAGGAG...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp ACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAACAATCATCATTGTGTGCTTACTaGCGCCAATCGTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TKLSVTLPDKVSFPQKQSSLCAY*RQSCGL
Trigger: CAGCCCACACGATTGGCGGCAGTAAGCACACAATGA...TGATTGTTTTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTACATGTATTGCTTCATTaGTTGTTCAGGTGTCATGGG +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLHVLLH*LFRCHG
Trigger: CCCATGACACCTGAACAAGCAATGAAGCAATACATG...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCGTGTTATCCTTGTCCTaGTTCCGCAGGTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFVLSLS*FRRCSR
Trigger: CCTGGAACACCTGCGGAAGCAGGACAAGGATAACAC...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCGCAGCTCAAACGTCATaGAGATGTGGTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFAAQTS*RCGCGR
Trigger: CCTTCCGCAACCACATCTGCATGACGTTTGAGCTGC...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCGACATGCTACACCTGTaGATGGACCTGGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFDMLHL*MDLEHG
Trigger: TCCATGCTCCAGGTCCATGCACAGGTGTAGCATGTC...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGAACTCTCAGTTACTTTaGCAGATAAAGTGTCATTCC +
Preference number: 4 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLNSQLL*QIKCHS
Trigger: GGAATGACACTTTATCTGGCAAAGTAACTGAGAGTT...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGCCTGAAGATGAGTCATaGCTTATGGTTTCTATTAAG +
Preference number: 4 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLPEDES*LMVSIK
Trigger: CTTAATAGAAACCATAAGGCATGACTCATCTTCAGG...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp AGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCAGAGGGTGTGTGCACATaGATTAAGTTATTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: RQDNTVLFLDLKTAQTSPEGVCT*IKLLGA
Trigger: TGCACCTAATAACTTAATGCATGTGCACACACCCTC...TGGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATTGGACTTTAGAGAGGTaGAGCTCCCCTGCCGTCTAT +
Preference number: 4 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHWTLER*SSPAVY
Trigger: ATAGACGGCAGGGGAGCTCCACCTCTCTAAAGTCCA...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAGGCAGACTGAAGCCCTaGAATTTATTCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLGRLKP*NLFFLM
Trigger: CATCAAGAAGAATAAATTCCAGGGCTTCAGTCTGCC...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp ATTCTTTTACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAATGCTACACCTGTGCATaGACCTGGAGCATGGAGGGA +
Preference number: 4 (lower is better)
Translates to: ILLPNSQLLCQIKCHSHKCYTCA*TWSMEG
Trigger: TCCCTCCATGCTCCAGGTCCATGCACAGGTGTAGCA...TTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGTAAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTATCATTAAGAGGCTGGTaGTCTTACAAAGCCACCAAA +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLSLRGW*SYKATK
Trigger: TTTGGTGGCTTTGTAAGACCACCAGCCTCTTAATGA...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR CAA 72 bp TCTTATGGCATTCCCTTGTTTAAGCATATCCCAGTATaGATGCAGGGAGCCACACTAAGTAATTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SYGIPLFKHIPV*MQGATLSNSLA
Trigger: AGCCAAGGAATTACTTAGTGTGGCTCCCTGCATCAATACTGGGATATGCTTAAACAAGGGAATGCCATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp TGTGCATATATAAGCTTACTTATCCTAATCTGTACTACCCAAAACCTATTGTCCATCCAGCAGTTTCTGTaGGGGCATGCCCAACAGTTC +
Preference number: 4 (lower is better)
Translates to: CAYISLLILICTTQNLLSIQQFL*GHAQQF
Trigger: GAACTGTTGGGCATGCCCTCACAGAAACTGCTGGAT...GGACAATAGGTTTTGGGTAGTACAGATTAGGATAAGTAAGCTTATATATGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCCATAGTGAATGTCTTTaGCACCAATCTGTAAATGCG +
Preference number: 4 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPHSECL*HQSVNA
Trigger: CGCATTTACAGATTGGTGTCAAAGACATTCACTATG...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp TGTGCATATATAAGCTTACTTATCCTAATCTGTACTACCCAAAACCTATTGTCCCTAGGCCTTATTTTCTaGGCCAACCGAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: CAYISLLILICTTQNLLSLGLIF*ANRGRR
Trigger: TCTCCTGCCTCGGTTGGCTCAGAAAATAAGGCCTAG...GGACAATAGGTTTTGGGTAGTACAGATTAGGATAAGTAAGCTTATATATGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATACGTGTCTAAGTTGTTaGTCGATAAAAACCCAAGCC +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNTCLSC*SIKTQA
Trigger: GGCTTGGGTTTTTATCGAGCAACAACTTAGACACGT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp TGTGCATATATAAGCTTACTTATCCTAATCTGTACTACCCAAAACCTATTGTCCCTTGTTCAGGTGTCATaGGGGTGGCTTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: CAYISLLILICTTQNLLSLVQVS*GWLSPS
Trigger: GGAAGGTGAAAGCCACCCCCATGACACCTGAACAAG...GGACAATAGGTTTTGGGTAGTACAGATTAGGATAAGTAAGCTTATATATGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AACTGTAGGATTATTATTAAAGAACTTAACCGGAAACTTTCTTGGCCTCACTGGCCACCTGTCATGCCCTaGCGCTTCTTAGCATTTAGA +
Preference number: 4 (lower is better)
Translates to: NCRIIIKELNRKLSWPHWPPVMP*RFLAFR
Trigger: TCTAAATGCTAAGAAGCGCCAGGGCATGACAGGTGG...CCAGTGAGGCCAAGAAAGTTTCCGGTTAAGTTCTTTAATAATAATCCTACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAAATTTTTGGCTCGTTTaGATGCATCCAGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLNFWLV*MHPAVS
Trigger: AGAAACTGCTGGATGCATCCAAACGAGCCAAAAATT...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAAGCTCACAAAATTTTTaGCTCGTTTGGATGCATCCA +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLSSQNF*LVWMHP
Trigger: TGGATGCATCCAAACGAGCCAAAAATTTTGTGAGCT...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGGGGCAGTTTAAACCTTaGGGATCTTATTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLGQFKP*GSYFVF
Trigger: AAATACAAAATAAGATCCCCAAGGTTTAAACTGCCC...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTATCTGTATTAACAGTCTaGGATACACAGCTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLSVLTV*DTQLKE
Trigger: TTCCTTCAGCTGTGTATCCCAGACTGTTAATACAGA...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCACTGCTAAATCTTCTTTaGAACTATGGAAATCCCCAC +
Preference number: 4 (lower is better)
Translates to: RQDNTVLFLDLKTAQTSPLLNLL*NYGNPH
Trigger: GTGGGGATTTCCATAGTTCCAAAGAAGATTTAGCAG...TGGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGAGGAATGCTATCTCTaGGGTTCTTCTAATGATACG +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNEECYL*GSSNDT
Trigger: CGTATCATTAGAAGAACCCCAGAGATAGCATTCCTC...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAGTATCTTTGCAGAGATaGGTTCCATTCTTACTGACT +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLVSLQR*VPFLLT
Trigger: AGTCAGTAAGAATGGAACCCATCTCTGCAAAGATAC...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCAATTGTAAAAATCCCTaGCCATCCTTACTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPNCKNP*PSLLEP
Trigger: TGGCTCTAGTAAGGATGGCCAGGGATTTTTACAATT...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCAAGAATGAAGACTGGTaGGGAATAATTGACAGGTTC +
Preference number: 4 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPKNEDW*GIIDRF
Trigger: GAACCTGTCAATTATTCCCCACCAGTCTTCATTCTT...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCGAAAAGAATGAAGACTaGTGGGGAATAATTGACAGG +
Preference number: 4 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPEKNED*WGIIDR
Trigger: CCTGTCAATTATTCCCCACCAGTCTTCATTCTTTTC...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp TGTGCATATATAAGCTTACTTATCCTAATCTGTACTACCCAAAACCTATTGTCCGGGCACCTGCACATATaGTCCCTGGTCATCATCATA +
Preference number: 4 (lower is better)
Translates to: CAYISLLILICTTQNLLSGHLHI*SLVIII
Trigger: TATGATGATGACCAGGGATCATATGTGCAGGTGCCC...GGACAATAGGTTTTGGGTAGTACAGATTAGGATAAGTAAGCTTATATATGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATTCTCCAGCATATGGATaGCATTCATTGTGTTATCCT +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNSPAYG*HSLCYP
Trigger: AGGATAACACAATGAATGTCATCCATATGCTGGAGA...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR TCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATTGTGGTTGCGGAAGGTaGAATTCTCCAGCATATGGA +
Preference number: 4 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHCGCGR*NSPAYG
Trigger: TCCATATGCTGGAGAATTTCACCTTCCGCAACCACA...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp TGTGCATATATAAGCTTACTTATCCTAATCTGTACTACCCAAAACCTATTGTCCGATAGTTTCCCAGGCTaGGAGAACCTTACAGTGGCA +
Preference number: 4 (lower is better)
Translates to: CAYISLLILICTTQNLLSDSFPG*ENLTVA
Trigger: TGCCACTGTAAGGTTCTCTCAGCCTGGGAAACTATC...GGACAATAGGTTTTGGGTAGTACAGATTAGGATAAGTAAGCTTATATATGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp ATTCTTTTACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAACTGAACAGCCAAAGTaGCTTCTGTTCGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ILLPNSQLLCQIKCHSHKTEQPK*LLFVQR
Trigger: CCTCTGGACGAACAGAAGTCACTTTGGCTGTTCAGT...TTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGTAAAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATTTTCTAGAGCTAGTTTaGAGACAACTTCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNFLELV*RQLRSS
Trigger: GGAACTTCGAAGTTGTCTTCAAACTAGCTCTAGAAA...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAAAGGCTGTGAGTTTTTaGATGTATTGCTTCATTGCT +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLKAVSF*MYCFIA
Trigger: AGCAATGAAGCAATACATGCAAAAACTCACAGCCTT...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCGCTCATAGAGGTTCATaGTCAGCAGCTCAAACGTCA +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFAHRGS*SAAQTS
Trigger: TGACGTTTGAGCTGCTGAGCATGAACCTCTATGAGC...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAATTATTCTGTTTTTGTaGAAAGCATCCAAGCACTGC +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLIILFL*KASKHC
Trigger: GCAGTGCTTGGATGCTTTGCACAAAAACAGAATAAT...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATATACCGCTTCTACCCTaGTGCTTTAACAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNIPLLP*CFNKMF
Trigger: GAACATTTTGTTAAAGCAGCAGGGTAGAAGCGGTAT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR GCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATAGAAGACAAACTAAATaGAAGCAACAGACGTGTGGT +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNRRQTK*KQQTCG
Trigger: ACCACACGTCTGTTGCTTGCATTTAGTTTGTCTTCT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp ACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAACAATCAGTTTCCTGGTTAACATaGCCGCTGGAGAGGAAAATG +
Preference number: 4 (lower is better)
Translates to: TKLSVTLPDKVSFPQKQSVSWLT*PLERKM
Trigger: CATTTTCCTCTCCAGCGGCCATGTTAACCAGGAAAC...TGATTGTTTTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAGATGCTCGTAACAACTaGAGCCAAAATCAATTACTT +
Preference number: 4 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLDARNN*SQNQLL
Trigger: AAGTAATTGATTTTGGCTCCAGTTGTTACGAGCATC...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATAATTTTTGGCTCGTTTaGATGCATCCAGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNNFWLV*MHPAVS
Trigger: AGAAACTGCTGGATGCATCCAAACGAGCCAAAAATT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR TCA 90 bp ACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAACAATCAGGTGTTCGAAGGCTGTaGGTTTTTGCATGTATTGCT +
Preference number: 4 (lower is better)
Translates to: TKLSVTLPDKVSFPQKQSGVRRL*VFACIA
Trigger: AGCAATACATGCAAAAACTCACAGCCTTCGAACACC...TGATTGTTTTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATCAGAACTGTAGCAGTTaGGCTGAGTATAATTACAAT +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNQNCSS*AEYNYN
Trigger: ATTGTAATTATACTCAGCTCAACTGCTACAGTTCTG...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp ACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAACAATCAGGAACTATAATCTCCTaGGTCAGTCAGTCAGATCTG +
Preference number: 4 (lower is better)
Translates to: TKLSVTLPDKVSFPQKQSGTIIS*VSQSDL
Trigger: CAGATCTGACTGACTGACTCAGGAGATTATAGTTCC...TGATTGTTTTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp ACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAACAATCACTCATTAAGCTTCCTTaGGACACATGGGAATGGCAA +
Preference number: 4 (lower is better)
Translates to: TKLSVTLPDKVSFPQKQSLIKLP*DTWEWQ
Trigger: TTGCCATTCCCATGTGTCTCAAGGAAGCTTAATGAG...TGATTGTTTTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATTGTTGTAAGCCCATTTaGTTGTGTCGTGAGCACTGT +
Preference number: 4 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHCCKPI*LCREHC
Trigger: ACAGTGCTCACGACACAACCAAATGGGCTTACAACA...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp TGTGCATATATAAGCTTACTTATCCTAATCTGTACTACCCAAAACCTATTGTCCGCTGAATATTCCCATTaGCATCTGTCATCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: CAYISLLILICTTQNLLSAEYSH*HLSSAP
Trigger: TGGCGCAGATGACAGATGCCAATGGGAATATTCAGC...GGACAATAGGTTTTGGGTAGTACAGATTAGGATAAGTAAGCTTATATATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp TGTGCATATATAAGCTTACTTATCCTAATCTGTACTACCCAAAACCTATTGTCCCCATCATTAAGAGGCTaGTGGTCTTACAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: CAYISLLILICTTQNLLSPSLRG*WSYKAT
Trigger: GGTGGCTTTGTAAGACCACCAGCCTCTTAATGATGG...GGACAATAGGTTTTGGGTAGTACAGATTAGGATAAGTAAGCTTATATATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR CAA 72 bp AAACCACCCATTAAGTTTAAAAGTGGCTTAAGTGCCTaGCACCCAAATTGTAAAAATCCCTGGCCATCCTTA +
Preference number: 4 (lower is better)
Translates to: KPPIKFKSGLSA*HPNCKNPWPSL
Trigger: TAAGGATGGCCAGGGATTTTTACAATTTGGGTGCAAGGCACTTAAGCCACTTTTAAACTTAATGGGTGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR CAA 72 bp CCAGTATTGATGCAGGGAGCCACACTAAGTAATTCCTaGGCTGTTGGTAACAGAAGGGAAATAAATAATGAT +
Preference number: 4 (lower is better)
Translates to: PVLMQGATLSNS*AVGNRREINND
Trigger: ATCATTATTTATTTCCCTTCTGTTACCAACAGCCAAGGAATTACTTAGTGTGGCTCCCTGCATCAATACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATTCTATTACTAAATGCTaGGATGTGGCAGCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHSITKC*DVAALV
Trigger: CACAAGAGCTGCCACATCTCAGCATTTAGTAATAGA...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp AACTGTAGGATTATTATTAAAGAACTTAACCGGAAACTTTCTTGGCCTCACTGGATGGCCCAATGCTACTaGTGCCTAAAGTGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: NCRIIIKELNRKLSWPHWMAQCY*CLKCFL
Trigger: TAGAAAACACTTTAGGCATCAGTAGCATTGGGCCAT...CCAGTGAGGCCAAGAAAGTTTCCGGTTAAGTTCTTTAATAATAATCCTACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCCAAGAGGGTAATATCTaGCTACACAATATCCCTGCA +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFQEGNI*LHNIPA
Trigger: TGCAGGGATATTGTGTAGTCAGATATTACCCTCTTG...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATCATGTATTGCTTCATTaGTTGTTCAGGTGTCATGGG +
Preference number: 4 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHHVLLH*LFRCHG
Trigger: CCCATGACACCTGAACAAGCAATGAAGCAATACATG...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp AACTGTAGGATTATTATTAAAGAACTTAACCGGAAACTTTCTTGGCCTCACTGGATAATTGACAGGTTCTaGTCCCCCAGCTTAACTATC +
Preference number: 4 (lower is better)
Translates to: NCRIIIKELNRKLSWPHWIIDRF*SPSLTI
Trigger: GATAGTTAAGCTGGGGGAGCAGAACCTGTCAATTAT...CCAGTGAGGCCAAGAAAGTTTCCGGTTAAGTTCTTTAATAATAATCCTACAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATATTTACCAGAACTTGTaGAGAGAAAAGAATGAAGAC +
Preference number: 4 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNIYQNL*REKNED
Trigger: GTCTTCATTCTTTTCTCTGCACAAGTTCTGGTAAAT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCGGCAGACTGAAGCCCTaGAATTTATTCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFGRLKP*NLFFLM
Trigger: CATCAAGAAGAATAAATTCCAGGGCTTCAGTCTGCC...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp ATTCTTTTACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAGAGAGAACCTTACAGTaGCACCTGAAAAGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: ILLPNSQLLCQIKCHSHKERTLQ*HLKSVN
Trigger: GTTCACACTTTTCAGGTGCCACTGTAAGGTTCTCTC...TTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGTAAAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCTTTAGGATTCCAATATaGCCCAATGCTACTGATGCC +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFFRIPI*PNATDA
Trigger: GGCATCAGTAGCATTGGGCCATATTGGAATCCTAAA...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
3UTR CAA 72 bp TCTTTACAAAACAGCTCACCGATCATACTAGAAAATTaGGAGGAACACACACGTTTCCATTCCCATTTATCC +
Preference number: 4 (lower is better)
Translates to: SLQNSSPIILEN*EEHTRFHSHLS
Trigger: GGATAAATGGGAATGGAAACGTGTGTGTTCCTCCAAATTTTCTAGTATGATCGGTGAGCTGTTTTGTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCTCTCCAGCATATGGATaGCATTCATTGTGTTATCCT +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFSPAYG*HSLCYP
Trigger: AGGATAACACAATGAATGTCATCCATATGCTGGAGA...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCGGGTTCCATTCTTACTaGCTAGAATTCGAAGAGTTA +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFGFHSY*LEFEEL
Trigger: TAACTCTTCGAATTCTAGTCAGTAAGAATGGAACCC...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATATACCGCTTCTACCCTaGTGCTTTAACAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHIPLLP*CFNKMF
Trigger: GAACATTTTGTTAAAGCAGCAGGGTAGAAGCGGTAT...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCTTCAGTACACACAGTTaGAGCATATTACAGTCACGT +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFFSTHS*SILQSR
Trigger: ACGTGACTGTAATATGCTGCAACTGTGTGTACTGAA...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCAAAAGGAATGCACTTTaGTTCATACCAAATGCCCTG +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFKRNAL*FIPNAL
Trigger: CAGGGCATTTGGTATGAACCAAAGTGCATTCCTTTT...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCAGCAACTCTGTAATATaGGGCTTCTTTACAAAACAG +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFSNSVI*GFFTKQ
Trigger: CTGTTTTGTAAAGAAGCCTCATATTACAGAGTTGCT...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATAACTTCTCAAGACCCTaGTATAGAGCTATCCATTTT +
Preference number: 4 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHNFSRP*YRAIHF
Trigger: AAAATGGATAGCTCTATATCAGGGTCTTGAGAAGTT...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR TCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCAAGACCAAAATTACCTaGTTACAACCTAAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFKTKIT*LQPKPQ
Trigger: TTGAGGCTTAGGTTGTAATCAGGTAATTTTGGTCTT...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp AACTGTAGGATTATTATTAAAGAACTTAACCGGAAACTTTCTTGGCCTCACTGGATTATTCTGTTTTTGTaGAAAGCATCCAAGCACTGC +
Preference number: 4 (lower is better)
Translates to: NCRIIIKELNRKLSWPHWIILFL*KASKHC
Trigger: GCAGTGCTTGGATGCTTTGCACAAAAACAGAATAAT...CCAGTGAGGCCAAGAAAGTTTCCGGTTAAGTTCTTTAATAATAATCCTACAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp ATTCTTTTACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAATGGGAATGGCAATTATaGTCCCACCCCATATATATA +
Preference number: 4 (lower is better)
Translates to: ILLPNSQLLCQIKCHSHKWEWQL*SHPIYI
Trigger: TATATATATGGGGTGGGAGCATAATTGCCATTCCCA...TTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGTAAAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATGATGCTCGTAACAACTaGAGCCAAAATCAATTACTT +
Preference number: 4 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHDARNN*SQNQLL
Trigger: AAGTAATTGATTTTGGCTCCAGTTGTTACGAGCATC...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp ATTCTTTTACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAGCTCACAAAATTTTTaGCTCGTTTGGATGCATCCA +
Preference number: 4 (lower is better)
Translates to: ILLPNSQLLCQIKCHSHKSSQNF*LVWMHP
Trigger: TGGATGCATCCAAACGAGCCAAAAATTTTGTGAGCT...TTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGTAAAAGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCATATTTAATGTTAAGTaGCGACAGCAGCATCTCACA +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFIFNVK*RQQHLT
Trigger: TGTGAGATGCTGCTGTCGCCACTTAACATTAAATAT...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp TGTGCATATATAAGCTTACTTATCCTAATCTGTACTACCCAAAACCTATTGTCCAAGGCTGTGAGTTTTTaGATGTATTGCTTCATTGCT +
Preference number: 4 (lower is better)
Translates to: CAYISLLILICTTQNLLSKAVSF*MYCFIA
Trigger: AGCAATGAAGCAATACATGCAAAAACTCACAGCCTT...GGACAATAGGTTTTGGGTAGTACAGATTAGGATAAGTAAGCTTATATATGCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCAATAAAATAGAGGAATaGTATCTCTGGGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFNKIEE*YLWGSS
Trigger: AGAAGAACCCCAGAGATAGCATTCCTCTATTTTATT...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATATTTTCTTATGTATGTaGAACACACTGGCAGTCATT +
Preference number: 4 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHIFLCM*NTLAVI
Trigger: AATGACTGCCAGTGTGTTGCACATACATAAGAAAAT...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp ACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAACAATCAATAATATATTCTTGCTaGTCCTTAACGACAGATGAC +
Preference number: 4 (lower is better)
Translates to: TKLSVTLPDKVSFPQKQSIIYSC*SLTTDD
Trigger: GTCATCTGTCGTTAAGGAGCAGCAAGAATATATTAT...TGATTGTTTTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp TGTGCATATATAAGCTTACTTATCCTAATCTGTACTACCCAAAACCTATTGTCCATGAGTCATGCCTTATaGTTTCTATTAAGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: CAYISLLILICTTQNLLSMSHAL*FLLRPV
Trigger: TACAGGCCTTAATAGAAACCATAAGGCATGACTCAT...GGACAATAGGTTTTGGGTAGTACAGATTAGGATAAGTAAGCTTATATATGCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp ATTCTTTTACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAACATTGGGTGGAACTaGTTAGAGCACATTAGAATA +
Preference number: 4 (lower is better)
Translates to: ILLPNSQLLCQIKCHSHKNIGWN*LEHIRI
Trigger: TATTCTAATGTGCTCTAACCAGTTCCACCCAATGTT...TTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGTAAAAGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp ATTCTTTTACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAATTAACTGAGGGTGTGTaGACATGCATTAAGTTATTA +
Preference number: 4 (lower is better)
Translates to: ILLPNSQLLCQIKCHSHKLTEGV*TCIKLL
Trigger: TAATAACTTAATGCATGTGCACACACCCTCAGTTAA...TTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGTAAAAGAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR GCA 90 bp ATTCTTTTACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAACTTTTCATGGGCTTTTaGTTTGCAAATAGCATACTT +
Preference number: 4 (lower is better)
Translates to: ILLPNSQLLCQIKCHSHKLFMGF*FANSIL
Trigger: AAGTATGCTATTTGCAAAGCAAAAGCCCATGAAAAG...TTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGTAAAAGAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CCA 90 bp ATTCTTTTACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAATTTTGTAGTCAACTTTaGAGCAAGTCACTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: ILLPNSQLLCQIKCHSHKFCSQL*SKSLQF
Trigger: AAACTGAAGTGACTTGCTCCAAAGTTGACTACAAAA...TTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGTAAAAGAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS CCA 90 bp GCATTTCAGGGCTGCCGTCGCCGCCGCCGGTCCTGCTGCTACTTCTaGCGGCCGCCGCCGCCGCCTCCCGGCCGCCCCTCGCGCGGGTCC +
Preference number: 5 (lower is better)
Translates to: AFQGCRRRRRSCCYF*RPPPPPPGRPSRGS
Trigger: GGACCCGCGCGAGGGGCGGCCGGGAGGCGGCGGCGGCGGCCGCCAGAAGTAGCAGCAGGACCGGCGGCGGCGACGGCAGCCCTGAAATGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS GCA 90 bp GAGGAAAATGCATTTCAGGGCTGCCGTCGCCGCCGCCGGTCCTGCTaGTACTTCTGGCGGCCGCCGCCGCCGCCTCCCGGCCGCCCCTCG +
Preference number: 5 (lower is better)
Translates to: EENAFQGCRRRRRSC*YFWRPPPPPPGRPS
Trigger: CGAGGGGCGGCCGGGAGGCGGCGGCGGCGGCCGCCAGAAGTAGCAGCAGGACCGGCGGCGGCGACGGCAGCCCTGAAATGCATTTTCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS GCA 90 bp GGAGAGGAAAATGCATTTCAGGGCTGCCGTCGCCGCCGCCGGTCCTaGTGCTACTTCTGGCGGCCGCCGCCGCCGCCTCCCGGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: GEENAFQGCRRRRRS*CYFWRPPPPPPGRP
Trigger: GGGGCGGCCGGGAGGCGGCGGCGGCGGCCGCCAGAAGTAGCAGCAGGACCGGCGGCGGCGACGGCAGCCCTGAAATGCATTTTCCTCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS CCA 90 bp TCGGGTAGGCGGCGGGAGCGGCGGCCGAAGGTTTCCTGGTTAACATaGCCGCTGGAGAGGAAAATGCATTTCAGGGCTGCCGTCGCCGCC +
Preference number: 5 (lower is better)
Translates to: SGRRRERRPKVSWLT*PLERKMHFRAAVAA
Trigger: GGCGGCGACGGCAGCCCTGAAATGCATTTTCCTCTCCAGCGGCCATGTTAACCAGGAAACCTTCGGCCGCCGCTCCCGCCGCCTACCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS CCA 90 bp CTCGGCCGGTCGGGTAGGCGGCGGGAGCGGCGGCCGAAGGTTTCCTaGTTAACATGGCCGCTGGAGAGGAAAATGCATTTCAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LGRSGRRRERRPKVS*LTWPLERKMHFRAA
Trigger: GGCAGCCCTGAAATGCATTTTCCTCTCCAGCGGCCATGTTAACCAGGAAACCTTCGGCCGCCGCTCCCGCCGCCTACCCGACCGGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS CCA 90 bp GGTGGAGCTCCCCTGCCGTCTATGAATGCTGTCCAGCTGCCGCTCTaGCACCACTGGCAAGCCCGTTTTGCCCACTGTTGTAAGCCCATT +
Preference number: 5 (lower is better)
Translates to: GGAPLPSMNAVQLPL*HHWQARFAHCCKPI
Trigger: AATGGGCTTACAACAGTGGGCAAAACGGGCTTGCCAGTGGTGCCAGAGCGGCAGCTGGACAGCATTCATAGACGGCAGGGGAGCTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS TCA 90 bp ATGCCTTCCATGGACTTTAGAGAGGTGGAGCTCCCCTGCCGTCTATaGATGCTGTCCAGCTGCCGCTCTGGCACCACTGGCAAGCCCGTT +
Preference number: 5 (lower is better)
Translates to: MPSMDFREVELPCRL*MLSSCRSGTTGKPV
Trigger: AACGGGCTTGCCAGTGGTGCCAGAGCGGCAGCTGGACAGCATTCATAGACGGCAGGGGAGCTCCACCTCTCTAAAGTCCATGGAAGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS GCA 90 bp CTTCCATGGACTTTAGAGAGGTGGAGCTCCCCTGCCGTCTATGAATaGTGTCCAGCTGCCGCTCTGGCACCACTGGCAAGCCCGTTTTGC +
Preference number: 5 (lower is better)
Translates to: LPWTLERWSSPAVYE*CPAAALAPLASPFC
Trigger: GCAAAACGGGCTTGCCAGTGGTGCCAGAGCGGCAGCTGGACAGCATTCATAGACGGCAGGGGAGCTCCACCTCTCTAAAGTCCATGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS CCA 90 bp GGGTGGCTTTCACCTTCCCCATGCCTTCCATGGACTTTAGAGAGGTaGAGCTCCCCTGCCGTCTATGAATGCTGTCCAGCTGCCGCTCTG +
Preference number: 5 (lower is better)
Translates to: GWLSPSPCLPWTLER*SSPAVYECCPAAAL
Trigger: CAGAGCGGCAGCTGGACAGCATTCATAGACGGCAGGGGAGCTCCACCTCTCTAAAGTCCATGGAAGGCATGGGGAAGGTGAAAGCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS CCA 90 bp CCCCTGCCGTCTATGAATGCTGTCCAGCTGCCGCTCTGGCACCACTaGCAAGCCCGTTTTGCCCACTGTTGTAAGCCCATTTGGTTGTGT +
Preference number: 5 (lower is better)
Translates to: PLPSMNAVQLPLWHH*QARFAHCCKPIWLC
Trigger: ACACAACCAAATGGGCTTACAACAGTGGGCAAAACGGGCTTGCCAGTGGTGCCAGAGCGGCAGCTGGACAGCATTCATAGACGGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS-3UTR CAA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGCCCCGGTGGGAGGCTTaGGCAACCGCCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLPRWEA*ATASSA
Trigger: GGCTGAGGAGGCGGTTGCCAAAGCCTCCCACCGGGG...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATCCCCGGTGGGAGGCTTaGGCAACCGCCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNPRWEA*ATASSA
Trigger: GGCTGAGGAGGCGGTTGCCAAAGCCTCCCACCGGGG...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS TCA 90 bp GGGAACGGCCTCCGTTTAGGACCACAGAGCCATCTGAGAGAGTCGTaGCAGTGCAGTAACGGGGATAACCCTTGGAGCTCACAAAATTTT +
Preference number: 5 (lower is better)
Translates to: GNGLRLGPQSHLRES*QCSNGDNPWSSQNF
Trigger: AAAATTTTGTGAGCTCCAAGGGTTATCCCCGTTACTGCACTGTCACGACTCTCTCAGATGGCTCTGTGGTCCTAAACGGAGGCCGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS GCA 90 bp TATCCTCAAACAACTGTTGAACCTGGATCTGTCCGTGAGCGTGGCTaGCGACATGCAGGTGATCATTCATTGTGTGCTTACTGCCGCCAA +
Preference number: 5 (lower is better)
Translates to: YPQTTVEPGSVRERG*RHAGDHSLCAYCRQ
Trigger: TTGGCGGCAGTAAGCACACAATGAATGATCACCTGCATGTCGGCAGCCACGCTCACGGACAGATCCAGGTTCAACAGTTGTTTGAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS TCA 90 bp TGGCATATGCCACAGCAAAATACAGGCCTCCATTATGAGGAGTACTaGGAAGCACATTCGCATCCTTCCTTTTCTGGTGCACCACAGGCT +
Preference number: 5 (lower is better)
Translates to: WHMPQQNTGLHYEEY*EAHSHPSFSGAPQA
Trigger: AGCCTGTGGTGCACCAGAAAAGGAAGGATGCGAATGTGCTTCTCAGTACTCCTCATAATGGAGGCCTGTATTTTGCTGTGGCATATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542503.1
CDS-3UTR CAA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAACTGGCAAGCCCGTTTaGCCCACTGTTGTAAGCCCA +
Preference number: 5 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLTGKPV*PTVVSP
Trigger: TGGGCTTACAACAGTGGGCAAAACGGGCTTGCCAGT...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CAA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGGTGAGCACTGTCCGCTaGTTACTGTTATCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLVSTVR*LLLSSN
Trigger: GTTTGAGGATAACAGTAACAAGCGGACAGTGCTCAC...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCTGTAAGCCCATTTGGTaGTGTCGTGAGCACTGTCCG +
Preference number: 5 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPCKPIW*CREHCP
Trigger: CGGACAGTGCTCACGACACAACCAAATGGGCTTACA...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATACTGGCAAGCCCGTTTaGCCCACTGTTGTAAGCCCA +
Preference number: 5 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNTGKPV*PTVVSP
Trigger: TGGGCTTACAACAGTGGGCAAAACGGGCTTGCCAGT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CAA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGGTATTGCTTCATTGCTaGTTCAGGTGTCATGGGGGT +
Preference number: 5 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLVLLHC*FRCHGG
Trigger: ACCCCCATGACACCTGAACAAGCAATGAAGCAATAC...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAATCGAGTGGGCAAACTaGCGAACCAAAGGCAGACTG +
Preference number: 5 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLIEWAN*RTKGRL
Trigger: CAGTCTGCCTTTGGTTCGCAAGTTTGCCCACTCGAT...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CAA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGGCTATGACGAGGCAATaGGGAACTCTTATGGCATTC +
Preference number: 5 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLAMTRQ*GTLMAF
Trigger: GAATGCCATAAGAGTTCCCAATTGCCTCGTCATAGC...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS CCA 90 bp AACGTCATGCAGATGTGGTTGCGGAAGGTGAAATTCTCCAGCATATaGATGACATTCATTGTGTTATCCTTGTCCTGCTTCCGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: NVMQMWLRKVKFSSI*MTFIVLSLSCFRRC
Trigger: ACACCTGCGGAAGCAGGACAAGGATAACACAATGAATGTCATCCATATGCTGGAGAATTTCACCTTCCGCAACCACATCTGCATGACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CAA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATTGTAAGCCCATTTGGTaGTGTCGTGAGCACTGTCCG +
Preference number: 5 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNCKPIW*CREHCP
Trigger: CGGACAGTGCTCACGACACAACCAAATGGGCTTACA...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS TCA 90 bp CAAGTAAATCTGGCATATGCCACAGCAAAATACAGGCCTCCATTATaGGGAGTACTGAGAAGCACATTCGCATCCTTCCTTTTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: QVNLAYATAKYRPPL*GVLRSTFASFLFWC
Trigger: GCACCAGAAAAGGAAGGATGCGAATGTGCTTCTCAGTACTCCTCATAATGGAGGCCTGTATTTTGCTGTGGCATATGCCAGATTTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542503.1
CDS-3UTR CAA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTATTCATTGTGTTATCCTaGTCCTGCTTCCGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLFIVLS*SCFRRC
Trigger: ACACCTGCGGAAGCAGGACAAGGATAACACAATGAA...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CAA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCATGCAGATGTGGTaGCGGAAGGTGAAATTCTCC +
Preference number: 5 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNVMQMW*RKVKFS
Trigger: GGAGAATTTCACCTTCCGCAACCACATCTGCATGAC...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CAA 90 bp AGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCATCTTGCACCACTCTGTaGTTCCACTGCTGTAGCAAT +
Preference number: 5 (lower is better)
Translates to: RQDNTVLFLDLKTAQTSPSCTTL*FHCCSN
Trigger: ATTGCTACAGCAGTGGAACAACAGAGTGGTGCAAGA...TGGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp TCTCCTCTACCGTTAATCTACAGTGTCTTGCACCACTCTGTTGTTCCACTGCTGTTAATCTACAGTGTCTaGCACCACTCTGTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: SPLPLIYSVLHHSVVPLLLIYSV*HHSVVP
Trigger: TGGAACAACAGAGTGGTGCAAGACACTGTAGATTAA...CAGCAGTGGAACAACAGAGTGGTGCAAGACACTGTAGATTAACGGTAGAGGAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATATCCTCAAACAACTGTaGAACCTGGATCTGTCCGTG +
Preference number: 5 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNILKQL*NLDLSV
Trigger: CACGGACAGATCCAGGTTCAACAGTTGTTTGAGGAT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CAA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTGAGCACTGTCCGCTaGTTACTGTTATCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNVSTVR*LLLSSN
Trigger: GTTTGAGGATAACAGTAACAAGCGGACAGTGCTCAC...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CAA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTATTGCTTCATTGCTaGTTCAGGTGTCATGGGGGT +
Preference number: 5 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNVLLHC*FRCHGG
Trigger: ACCCCCATGACACCTGAACAAGCAATGAAGCAATAC...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CAA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAGCATGTATTGCTTCATaGCTTGTTCAGGTGTCATGG +
Preference number: 5 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLACIAS*LVQVSW
Trigger: CCATGACACCTGAACAAGCAATGAAGCAATACATGC...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CAA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCCCACTAAAAGCTGCTTaGCCGGCTTTTAGAATGTCA +
Preference number: 5 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPPLKAA*PAFRMS
Trigger: TGACATTCTAAAAGCCGGCAAAGCAGCTTTTAGTGG...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTACCTCCTCTAAACGTGTaGTTAACATTGGCCTTACTG +
Preference number: 5 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLPPLNV*LTLALL
Trigger: CAGTAAGGCCAATGTTAACAACACGTTTAGAGGAGG...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGAGCTCACAAAATTTTaGGCTCGTTTGGATGCATCC +
Preference number: 5 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNELTKF*ARLDAS
Trigger: GGATGCATCCAAACGAGCCAAAAATTTTGTGAGCTC...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CAA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAGAAGGTGGAGGTAACTaGGATATAGATGTGATAGCA +
Preference number: 5 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLEGGGN*DIDVIA
Trigger: TGCTATCACATCTATATCCAAGTTACCTCCACCTTC...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CAA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTATTTCAGTACACACAGTaGCAGCATATTACAGTCACG +
Preference number: 5 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLFQYTQ*QHITVT
Trigger: CGTGACTGTAATATGCTGCAACTGTGTGTACTGAAA...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp AAGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCACACTAAGTAATTCCTaGGCTGTTGGTAACAGAAGG +
Preference number: 5 (lower is better)
Translates to: KTRQHCAIPRSENSSDIPTLSNS*AVGNRR
Trigger: CCTTCTGTTACCAACAGCCAAGGAATTACTTAGTGT...GGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAGAGTTTTTGCATGTATaGCTTCATTGCTTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLEFLHV*LHCLFR
Trigger: CCTGAACAAGCAATGAAGCAATACATGCAAAAACTC...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CAA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATAAATTTTTGGCTCGTTaGGATGCATCCAGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNKFLAR*DASSSF
Trigger: GAAACTGCTGGATGCATCCAAACGAGCCAAAAATTT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS-3UTR CAA 90 bp GAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATGTCGTATCTTTCAGGTTAAGAACAAAAGGCACATaGTTAACACTAAGGGCACAA +
Preference number: 5 (lower is better)
Translates to: ELLLFNPVRLSNVVSFRLRTKGT*LTLRAQ
Trigger: TTGTGCCCTTAGTGTTAACAATGTGCCTTTTGTTCT...TAACCTGAAAGATACGACATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp AGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCATCTTATGGCATTCCCTaGTTTAAGCATATCCCAGTA +
Preference number: 5 (lower is better)
Translates to: RQDNTVLFLDLKTAQTSPSYGIP*FKHIPV
Trigger: TACTGGGATATGCTTAAACAAGGGAATGCCATAAGA...TGGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATTTCATTGTGTTATCCTaGTCCTGCTTCCGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHFIVLS*SCFRRC
Trigger: ACACCTGCGGAAGCAGGACAAGGATAACACAATGAA...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp AGACAAGACAACACTGTGCTATTCCTAGATCTGAAAACAGCTCAGACATCCCCATTTTCTAGAGCTAGTTaGAAGACAACTTCGAAGTTC +
Preference number: 5 (lower is better)
Translates to: RQDNTVLFLDLKTAQTSPFSRAS*KTTSKF
Trigger: GAACTTCGAAGTTGTCTTCAAACTAGCTCTAGAAAA...TGGGGATGTCTGAGCTGTTTTCAGATCTAGGAATAGCACAGTGTTGTCTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS GCA 90 bp ATACCGAAGTTTACACACACGTTAAAAACAAGTAAATCTGGCATATaGCACAGCAAAATACAGGCCTCCATTATGAGGAGTACTGAGAAG +
Preference number: 5 (lower is better)
Translates to: IPKFTHTLKTSKSGI*HSKIQASIMRSTEK
Trigger: CTTCTCAGTACTCCTCATAATGGAGGCCTGTATTTTGCTGTGGCATATGCCAGATTTACTTGTTTTTAACGTGTGTGTAAACTTCGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542503.1
CDS-3UTR CAA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCGAGCTCACAAAATTTTaGGCTCGTTTGGATGCATCC +
Preference number: 5 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFELTKF*ARLDAS
Trigger: GGATGCATCCAAACGAGCCAAAAATTTTGTGAGCTC...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATATCATACTAGAAAATTaGGAGGAACACACACGTTTC +
Preference number: 5 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNIILEN*EEHTRF
Trigger: GAAACGTGTGTGTTCCTCCAAATTTTCTAGTATGAT...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp ATTCTTTTACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAAAGCATATCCCAGTATaGATGCAGGGAGCCACACTA +
Preference number: 5 (lower is better)
Translates to: ILLPNSQLLCQIKCHSHKKHIPV*MQGATL
Trigger: TAGTGTGGCTCCCTGCATCAATACTGGGATATGCTT...TTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGTAAAAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp GCAAATAAAAACAGGTCTGAGCTACTCCTTTTCAACCCAGTAAGGCTCAGCAATCTTTACTTAAATGATTaGGGGCTTTTCATGGGCTTT +
Preference number: 5 (lower is better)
Translates to: ANKNRSELLLFNPVRLSNLYLND*GLFMGF
Trigger: AAAGCCCATGAAAAGCCCCAAATCATTTAAGTAAAG...ATTGCTGAGCCTTACTGGGTTGAAAAGGAGTAGCTCAGACCTGTTTTTATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp AACTGTAGGATTATTATTAAAGAACTTAACCGGAAACTTTCTTGGCCTCACTGGAAATTTTTGGCTCGTTaGGATGCATCCAGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: NCRIIIKELNRKLSWPHWKFLAR*DASSSF
Trigger: GAAACTGCTGGATGCATCCAAACGAGCCAAAAATTT...CCAGTGAGGCCAAGAAAGTTTCCGGTTAAGTTCTTTAATAATAATCCTACAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATAAGACAGATGTATCTTaGCAGAGATGGGTTCCATTC +
Preference number: 5 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHKTDVS*QRWVPF
Trigger: GAATGGAACCCATCTCTGCAAAGATACATCTGTCTT...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCAGTCACGTGTCTAAGTaGTTGCTCGATAAAAACCCA +
Preference number: 5 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFSHVSK*LLDKNP
Trigger: TGGGTTTTTATCGAGCAACAACTTAGACACGTGACT...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp AACTGTAGGATTATTATTAAAGAACTTAACCGGAAACTTTCTTGGCCTCACTGGGAGTTTTTGCATGTATaGCTTCATTGCTTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: NCRIIIKELNRKLSWPHWEFLHV*LHCLFR
Trigger: CCTGAACAAGCAATGAAGCAATACATGCAAAAACTC...CCAGTGAGGCCAAGAAAGTTTCCGGTTAAGTTCTTTAATAATAATCCTACAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCGTCAAACCATTTAACTaGAGGTTGAACTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFVKPFN*RLNFSS
Trigger: GGAGGAAAAGTTCAACCTCAAGTTAAATGGTTTGAC...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp ATTCTTTTACCAAACTCTCAGTTACTTTGCCAGATAAAGTGTCATTCCCACAAAACTACCCAAAACCTATaGTCCAAACAGGCAGAAATC +
Preference number: 5 (lower is better)
Translates to: ILLPNSQLLCQIKCHSHKTTQNL*SKQAEI
Trigger: GATTTCTGCCTGTTTGGACAATAGGTTTTGGGTAGT...TTTGTGGGAATGACACTTTATCTGGCAAAGTAACTGAGAGTTTGGTAAAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATAGTGGCTTAAGTGCCTaGCACCCAAATTGTAAAAAT +
Preference number: 5 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHSGLSA*HPNCKN
Trigger: ATTTTTACAATTTGGGTGCAAGGCACTTAAGCCACT...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp AAATCAATTTCCCCTTCTAACAGACCAACACTAATGTCAACTAGGGACATTTTCAAACTCTCAGTTACTTaGCCAGATAAAGTGTCATTC +
Preference number: 5 (lower is better)
Translates to: KSISPSNRPTLMSTRDIFKLSVT*PDKVSF
Trigger: GAATGACACTTTATCTGGCAAAGTAACTGAGAGTTT...GAAAATGTCCCTAGTTGACATTAGTGTTGGTCTGTTAGAAGGGGAAATTGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp TGTGCATATATAAGCTTACTTATCCTAATCTGTACTACCCAAAACCTATTGTCCATAGAGCTATCCATTTaGCATTCTAAACCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: CAYISLLILICTTQNLLSIELSI*HSKPSP
Trigger: TGGAGAGGGTTTAGAATGCAAAATGGATAGCTCTAT...GGACAATAGGTTTTGGGTAGTACAGATTAGGATAAGTAAGCTTATATATGCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS-3UTR CAA 90 bp AAAAATGTGAACCACAGAGACCACCAAGTACAAAAACTGCAAACTCATAAGCATTCATGGGCTTTTGCTTaGCAAATAGCATACTTCATT +
Preference number: 5 (lower is better)
Translates to: KNVNHRDHQVQKLQTHKHSWAFA*QIAYFI
Trigger: AATGAAGTATGCTATTTGCAAAGCAAAAGCCCATGA...ATGCTTATGAGTTTGCAGTTTTTGTACTTGGTGGTCTCTGTGGTTCACATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344096.4
CDS CCA 72 bp TGCCGCCAATCGTGTGGGCTGCGGCGGCAGCGTTGCTaGCCCGGAGAGGCGGCAGGGCGATGGGGGAGGGCG +
Preference number: 6 (lower is better)
Translates to: CRQSCGLRRQRC*PGEAAGRWGRA
Trigger: CGCCCTCCCCCATCGCCCTGCCGCCTCTCCGGGCCAGCAACGCTGCCGCCGCAGCCCACACGATTGGCGGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319833.6
ENST00000344096.4
CDS GCA 72 bp TACTGCCGCCAATCGTGTGGGCTGCGGCGGCAGCGTTaGTGGCCCGGAGAGGCGGCAGGGCGATGGGGGAGG +
Preference number: 6 (lower is better)
Translates to: YCRQSCGLRRQR*WPGEAAGRWGR
Trigger: CCTCCCCCATCGCCCTGCCGCCTCTCCGGGCCAGCAACGCTGCCGCCGCAGCCCACACGATTGGCGGCAGTA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319833.6
ENST00000344096.4
CDS GCA 72 bp GCGCGGGTCCCCGGCGCCTCGTCGCCGCCTCGCGTCTaGTACAGCCAGACACACACAGTCCACTGCATCCCC +
Preference number: 6 (lower is better)
Translates to: ARVPGASSPPRV*YSQTHTVHCIP
Trigger: GGGGATGCAGTGGACTGTGTGTGTCTGGCTGTAGCAGACGCGAGGCGGCGACGAGGCGCCGGGGACCCGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS CAA 72 bp TTACTGCCGCCAATCGTGTGGGCTGCGGCGGCAGCGTaGCTGGCCCGGAGAGGCGGCAGGGCGATGGGGGAG +
Preference number: 6 (lower is better)
Translates to: LLPPIVWAAAAA*LARRGGRAMGE
Trigger: CTCCCCCATCGCCCTGCCGCCTCTCCGGGCCAGCAACGCTGCCGCCGCAGCCCACACGATTGGCGGCAGTAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319833.6
ENST00000344096.4
CDS CCA 72 bp CTGAAGCTGACGAACGGCGCTGTCCCCACCTCGGCCTaGAAGCCACGTGCGGGAGGAGACAAAAGAGGGTCA +
Preference number: 6 (lower is better)
Translates to: LKLTNGAVPTSA*KPRAGGDKRGS
Trigger: TGACCCTCTTTTGTCTCCTCCCGCACGTGGCTTCCAGGCCGAGGTGGGGACAGCGCCGTTCGTCAGCTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319833.6
CDS CCA 72 bp CGGCGGGAGCGGCGGCCGAAGGTTTCCTGGTTAACATaGCCGCTGGAGAGGAAAATGCATTTCAGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: RRERRPKVSWLT*PLERKMHFRAA
Trigger: GGCAGCCCTGAAATGCATTTTCCTCTCCAGCGGCCATGTTAACCAGGAAACCTTCGGCCGCCGCTCCCGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS CAA 90 bp GGATCTGTCCGTGAGCGTGGCTGCCGACATGCAGGTGATCATTCATaGTGTGCTTACTGCCGCCAATCGTGTGGGCTGCGGCGGCAGCGT +
Preference number: 6 (lower is better)
Translates to: GSVRERGCRHAGDHS*CAYCRQSCGLRRQR
Trigger: ACGCTGCCGCCGCAGCCCACACGATTGGCGGCAGTAAGCACACAATGAATGATCACCTGCATGTCGGCAGCCACGCTCACGGACAGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319833.6
ENST00000344096.4
CDS CCA 72 bp CCCCTGCCGTCTATGAATGCTGTCCAGCTGCCGCTCTaGCACCACTGGCAAGCCCGTTTTGCCCACTGTTGT +
Preference number: 6 (lower is better)
Translates to: PLPSMNAVQLPL*HHWQARFAHCC
Trigger: ACAACAGTGGGCAAAACGGGCTTGCCAGTGGTGCCAGAGCGGCAGCTGGACAGCATTCATAGACGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS CCA 72 bp TCGGGTAGGCGGCGGGAGCGGCGGCCGAAGGTTTCCTaGTTAACATGGCCGCTGGAGAGGAAAATGCATTTC +
Preference number: 6 (lower is better)
Translates to: SGRRRERRPKVS*LTWPLERKMHF
Trigger: GAAATGCATTTTCCTCTCCAGCGGCCATGTTAACCAGGAAACCTTCGGCCGCCGCTCCCGCCGCCTACCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS CAA 90 bp GGATCTGTCCGTGAGCGTGGCTGCCGACATGCAGGTGATCATTCATaGTGTGCTTACTGCCGCCAATCGCTGCTGCCCTCCGGCCGAAAG +
Preference number: 6 (lower is better)
Translates to: GSVRERGCRHAGDHS*CAYCRQSLLPSGRK
Trigger: CTTTCGGCCGGAGGGCAGCAGCGATTGGCGGCAGTAAGCACACAATGAATGATCACCTGCATGTCGGCAGCCACGCTCACGGACAGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543747.1
CDS TCA 72 bp ATGGACTTTAGAGAGGTGGAGCTCCCCTGCCGTCTATaGATGCTGTCCAGCTGCCGCTCTGGCACCACTGGC +
Preference number: 6 (lower is better)
Translates to: MDFREVELPCRL*MLSSCRSGTTG
Trigger: GCCAGTGGTGCCAGAGCGGCAGCTGGACAGCATTCATAGACGGCAGGGGAGCTCCACCTCTCTAAAGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS GCA 72 bp ACTTTAGAGAGGTGGAGCTCCCCTGCCGTCTATGAATaGTGTCCAGCTGCCGCTCTGGCACCACTGGCAAGC +
Preference number: 6 (lower is better)
Translates to: TLERWSSPAVYE*CPAAALAPLAS
Trigger: GCTTGCCAGTGGTGCCAGAGCGGCAGCTGGACAGCATTCATAGACGGCAGGGGAGCTCCACCTCTCTAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS CAA 72 bp TCCAGCTGCCGCTCTGGCACCACTGGCAAGCCCGTTTaGCCCACTGTTGTAAGCCCATTTGGTTGTGTCGTG +
Preference number: 6 (lower is better)
Translates to: SSCRSGTTGKPV*PTVVSPFGCVV
Trigger: CACGACACAACCAAATGGGCTTACAACAGTGGGCAAAACGGGCTTGCCAGTGGTGCCAGAGCGGCAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS CCA 72 bp TCACCTTCCCCATGCCTTCCATGGACTTTAGAGAGGTaGAGCTCCCCTGCCGTCTATGAATGCTGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: SPSPCLPWTLER*SSPAVYECCPA
Trigger: AGCTGGACAGCATTCATAGACGGCAGGGGAGCTCCACCTCTCTAAAGTCCATGGAAGGCATGGGGAAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS TCA 72 bp CCTGTAAGCCACGTGATCGTGGGGCACCTGCACATATaGTCCCTGGTCATCATCATAGCCACCATTGTTGGG +
Preference number: 6 (lower is better)
Translates to: PVSHVIVGHLHI*SLVIIIATIVG
Trigger: CCCAACAATGGTGGCTATGATGATGACCAGGGATCATATGTGCAGGTGCCCCACGATCACGTGGCTTACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344096.4
ENST00000393555.3
ENST00000543747.1
CDS TCA 72 bp CTCCGTTTAGGACCACAGAGCCATCTGAGAGAGTCGTaGCAGTGCAGTAACGGGGATAACCCTTGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: LRLGPQSHLRES*QCSNGDNPWSS
Trigger: TGAGCTCCAAGGGTTATCCCCGTTACTGCACTGTCACGACTCTCTCAGATGGCTCTGTGGTCCTAAACGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS CAA 90 bp TGTCGTGAGCACTGTCCGCTTGTTACTGTTATCCTCAAACAACTGTaGAACCTGGATCTGTCCGTGAGCGTGGCTGCCGACATGCAGGTG +
Preference number: 6 (lower is better)
Translates to: CREHCPLVTVILKQL*NLDLSVSVAADMQV
Trigger: CACCTGCATGTCGGCAGCCACGCTCACGGACAGATCCAGGTTCAACAGTTGTTTGAGGATAACAGTAACAAGCGGACAGTGCTCACGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS CAA 72 bp CACTGTCCGCTTGTTACTGTTATCCTCAAACAACTGTaGAACCTGGATCTGTCCGTGAGCGTGGCTGCCGAC +
Preference number: 6 (lower is better)
Translates to: HCPLVTVILKQL*NLDLSVSVAAD
Trigger: GTCGGCAGCCACGCTCACGGACAGATCCAGGTTCAACAGTTGTTTGAGGATAACAGTAACAAGCGGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS GCA 72 bp ACAACTGTTGAACCTGGATCTGTCCGTGAGCGTGGCTaGCGACATGCAGGTGATCATTCATTGTGTGCTTAC +
Preference number: 6 (lower is better)
Translates to: TTVEPGSVRERG*RHAGDHSLCAY
Trigger: GTAAGCACACAATGAATGATCACCTGCATGTCGGCAGCCACGCTCACGGACAGATCCAGGTTCAACAGTTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS CAA 90 bp CACCACTGGCAAGCCCGTTTTGCCCACTGTTGTAAGCCCATTTGGTaGTGTCGTGAGCACTGTCCGCTTGTTACTGTTATCCTCAAACAA +
Preference number: 6 (lower is better)
Translates to: HHWQARFAHCCKPIW*CREHCPLVTVILKQ
Trigger: TTGTTTGAGGATAACAGTAACAAGCGGACAGTGCTCACGACACAACCAAATGGGCTTACAACAGTGGGCAAAACGGGCTTGCCAGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS CCA 72 bp TTTGCATGTATTGCTTCATTGCTTGTTCAGGTGTCATaGGGGTGGCTTTCACCTTCCCCATGCCTTCCATGG +
Preference number: 6 (lower is better)
Translates to: FACIASLLVQVS*GWLSPSPCLPW
Trigger: CCATGGAAGGCATGGGGAAGGTGAAAGCCACCCCCATGACACCTGAACAAGCAATGAAGCAATACATGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS CAA 72 bp CAAGCCCGTTTTGCCCACTGTTGTAAGCCCATTTGGTaGTGTCGTGAGCACTGTCCGCTTGTTACTGTTATC +
Preference number: 6 (lower is better)
Translates to: QARFAHCCKPIW*CREHCPLVTVI
Trigger: GATAACAGTAACAAGCGGACAGTGCTCACGACACAACCAAATGGGCTTACAACAGTGGGCAAAACGGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319833.6
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS TCA 72 bp ATTTTTGGCTCGTTTGGATGCATCCAGCAGTTTCTGTaGGGGCATGCCCAACAGTTCAATCATACAGGCCAG +
Preference number: 6 (lower is better)
Translates to: IFGSFGCIQQFL*GHAQQFNHTGQ
Trigger: CTGGCCTGTATGATTGAACTGTTGGGCATGCCCTCACAGAAACTGCTGGATGCATCCAAACGAGCCAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS TCA 72 bp ATGTCGTATCTTTCAGGTTACCAGCATCAGGGGACGTaGGCTCAGCTAACAAGTTTTGGCAACACTGTCCTC +
Preference number: 6 (lower is better)
Translates to: MSYLSGYQHQGT*AQLTSFGNTVL
Trigger: GAGGACAGTGTTGCCAAAACTTGTTAGCTGAGCTCACGTCCCCTGATGCTGGTAACCTGAAAGATACGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS GCA 72 bp AGCATATGGATGACATTCATTGTGTTATCCTTGTCCTaGTTCCGCAGGTGTTCCAGGATTCGGATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SIWMTFIVLSLS*FRRCSRIRISS
Trigger: GGAGGAGATCCGAATCCTGGAACACCTGCGGAAGCAGGACAAGGATAACACAATGAATGTCATCCATATGCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS CCA 72 bp AGGTTCATGCTCAGCAGCTCAAACGTCATGCAGATGTaGTTGCGGAAGGTGAAATTCTCCAGCATATGGATG +
Preference number: 6 (lower is better)
Translates to: RFMLSSSNVMQM*LRKVKFSSIWM
Trigger: CATCCATATGCTGGAGAATTTCACCTTCCGCAACCACATCTGCATGACGTTTGAGCTGCTGAGCATGAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS CCA 72 bp GATAACCCTTGGAGCTCACAAAATTTTTGGCTCGTTTaGATGCATCCAGCAGTTTCTGTGAGGGCATGCCCA +
Preference number: 6 (lower is better)
Translates to: DNPWSSQNFWLV*MHPAVSVRACP
Trigger: TGGGCATGCCCTCACAGAAACTGCTGGATGCATCCAAACGAGCCAAAAATTTTGTGAGCTCCAAGGGTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS CAA 72 bp CTCATGGTGTTCGAAGGCTGTGAGTTTTTGCATGTATaGCTTCATTGCTTGTTCAGGTGTCATGGGGGTGGC +
Preference number: 6 (lower is better)
Translates to: LMVFEGCEFLHV*LHCLFRCHGGG
Trigger: GCCACCCCCATGACACCTGAACAAGCAATGAAGCAATACATGCAAAAACTCACAGCCTTCGAACACCATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS CAA 72 bp AAAGCATCCAAGCACTGCAGAATCGAGTGGGCAAACTaGCGAACCAAAGGCAGACTGAAGCCCTGGAATTTA +
Preference number: 6 (lower is better)
Translates to: KASKHCRIEWAN*RTKGRLKPWNL
Trigger: TAAATTCCAGGGCTTCAGTCTGCCTTTGGTTCGCAAGTTTGCCCACTCGATTCTGCAGTGCTTGGATGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS TCA 72 bp CCACAGCAAAATACAGGCCTCCATTATGAGGAGTACTaGGAAGCACATTCGCATCCTTCCTTTTCTGGTGCA +
Preference number: 6 (lower is better)
Translates to: PQQNTGLHYEEY*EAHSHPSFSGA
Trigger: TGCACCAGAAAAGGAAGGATGCGAATGTGCTTCTCAGTACTCCTCATAATGGAGGCCTGTATTTTGCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542503.1
CDS TCA 72 bp CTGGCATATGCCACAGCAAAATACAGGCCTCCATTATaGGGAGTACTGAGAAGCACATTCGCATCCTTCCTT +
Preference number: 6 (lower is better)
Translates to: LAYATAKYRPPL*GVLRSTFASFL
Trigger: AAGGAAGGATGCGAATGTGCTTCTCAGTACTCCTCATAATGGAGGCCTGTATTTTGCTGTGGCATATGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542503.1
CDS GCA 72 bp TCATGGTGTTCGAAGGCTGTGAGTTTTTGCATGTATTaGTTCATTGCTTGTTCAGGTGTCATGGGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: SWCSKAVSFCMY*FIACSGVMGVA
Trigger: AGCCACCCCCATGACACCTGAACAAGCAATGAAGCAATACATGCAAAAACTCACAGCCTTCGAACACCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344096.4
ENST00000393555.3
ENST00000542503.1
ENST00000543747.1
CDS CAA 72 bp TTCTCCAGCATATGGATGACATTCATTGTGTTATCCTaGTCCTGCTTCCGCAGGTGTTCCAGGATTCGGATC +
Preference number: 6 (lower is better)
Translates to: FSSIWMTFIVLS*SCFRRCSRIRI
Trigger: GATCCGAATCCTGGAACACCTGCGGAAGCAGGACAAGGATAACACAATGAATGTCATCCATATGCTGGAGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS CAA 72 bp TTCATGCTCAGCAGCTCAAACGTCATGCAGATGTGGTaGCGGAAGGTGAAATTCTCCAGCATATGGATGACA +
Preference number: 6 (lower is better)
Translates to: FMLSSSNVMQMW*RKVKFSSIWMT
Trigger: TGTCATCCATATGCTGGAGAATTTCACCTTCCGCAACCACATCTGCATGACGTTTGAGCTGCTGAGCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS CAA 72 bp CTCAGTTTGGAAGCTGAGCTAGAAGGTGGAGGTAACTaGGATATAGATGTGATAGCACCGGTGCTCTCAGTT +
Preference number: 6 (lower is better)
Translates to: LSLEAELEGGGN*DIDVIAPVLSV
Trigger: AACTGAGAGCACCGGTGCTATCACATCTATATCCAAGTTACCTCCACCTTCTAGCTCAGCTTCCAAACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS CAA 90 bp AAATTAGTCCTCAGTTTGGAAGCTGAGCTAGAAGGTGGAGGTAACTaGGATATAGATGTGATAGCACCGGTGCTCTCAGTTATCCTTTTC +
Preference number: 6 (lower is better)
Translates to: KLVLSLEAELEGGGN*DIDVIAPVLSVILF
Trigger: GAAAAGGATAACTGAGAGCACCGGTGCTATCACATCTATATCCAAGTTACCTCCACCTTCTAGCTCAGCTTCCAAACTGAGGACTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344096.4
ENST00000393555.3
CDS GCA 72 bp TTTACACACACGTTAAAAACAAGTAAATCTGGCATATaGCACAGCAAAATACAGGCCTCCATTATGAGGAGT +
Preference number: 6 (lower is better)
Translates to: FTHTLKTSKSGI*HSKIQASIMRS
Trigger: ACTCCTCATAATGGAGGCCTGTATTTTGCTGTGGCATATGCCAGATTTACTTGTTTTTAACGTGTGTGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542503.1