RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DYRK1A (Homo sapiens)

Ensembl gene IDs: ENSG00000157540

Ensembl transcript IDs: ENST00000338785.8, ENST00000398956.2, ENST00000398960.7, ENST00000426672.6, ENST00000455097.6, ENST00000462274.2, ENST00000642309.1, ENST00000643355.1, ENST00000643551.1, ENST00000643624.1, ENST00000643808.1, ENST00000643854.1, ENST00000644367.1, ENST00000644942.1, ENST00000645424.1, ENST00000645774.1, ENST00000646224.1, ENST00000646351.1, ENST00000646523.1, ENST00000646548.1, ENST00000647188.2, ENST00000647425.1, ENST00000647504.1

Found 1714 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTGGAGCGTCACCCAGCAGTGTCCCAGCACCCTGGAGCTGCTGCTaGTGCAGACAGCCTGAACCAGCAGTGGGGAAAGCGGAAGCAGAG +
Preference number: 1 (lower is better)
Translates to: CGASPSSVPAPWSCC*CRQPEPAVGKAEAE
Trigger: CTCTGCTTCCGCTTTCCCCACTGCTGGTTCAGGCTGTCTGCAGCAGCAGCAGCTCCAGGGTGCTGGGACACTGCTGGGTGACGCTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 90 bp CACTGTGGAGCGTCACCCAGCAGTGTCCCAGCACCCTGGAGCTGCTaGTGCTGCAGACAGCCTGAACCAGCAGTGGGGAAAGCGGAAGCA +
Preference number: 1 (lower is better)
Translates to: HCGASPSSVPAPWSC*CCRQPEPAVGKAEA
Trigger: TGCTTCCGCTTTCCCCACTGCTGGTTCAGGCTGTCTGCAGCAGCAGCAGCTCCAGGGTGCTGGGACACTGCTGGGTGACGCTCCACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 90 bp ACACACTGTGGAGCGTCACCCAGCAGTGTCCCAGCACCCTGGAGCTaGTGCTGCTGCAGACAGCCTGAACCAGCAGTGGGGAAAGCGGAA +
Preference number: 1 (lower is better)
Translates to: THCGASPSSVPAPWS*CCCRQPEPAVGKAE
Trigger: TTCCGCTTTCCCCACTGCTGGTTCAGGCTGTCTGCAGCAGCAGCAGCTCCAGGGTGCTGGGACACTGCTGGGTGACGCTCCACAGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 90 bp AGAACTCGGCCAACCACACCCATGCCAGCATCGCCCGGCCTCCCATaGGAACAGAGCTGGGCTCCACTTGTCTTGTCCACTTGTTTCCTC +
Preference number: 1 (lower is better)
Translates to: RTRPTTPMPASPGLP*EQSWAPLVLSTCFL
Trigger: GAGGAAACAAGTGGACAAGACAAGTGGAGCCCAGCTCTGTTCGCATGGGAGGCCGGGCGATGCTGGCATGGGTGTGGTTGGCCGAGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp ACACTTTCTGCTGGCCACACTCAGGCTCAGGCCCGTCCTCTTGCCTaGGTGTTCATTAACAACTCCCTGCCCGGCACACCTGCTTGGCTG +
Preference number: 1 (lower is better)
Translates to: TLSAGHTQAQARPLA*VFINNSLPGTPAWL
Trigger: CAGCCAAGCAGGTGTGCCGGGCAGGGAGTTGTTAATGAACACCCAGGCAAGAGGACGGGCCTGAGCCTGAGTGTGGCCAGCAGAAAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp AGACCACCACTCAGACCTCCCCAGGACTGGCCACGACCGACCCGTTaGTTGCTTCTCAGTGCACCTTGGTTAGGAGACCAGTCACGTTCC +
Preference number: 1 (lower is better)
Translates to: RPPLRPPQDWPRPTR*LLLSAPWLGDQSRS
Trigger: GGAACGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGGCCAGTCCTGGGGAGGTCTGAGTGGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR GCA 90 bp CCTGGGTGTTCATTAACAACTCCCTGCCCGGCACACCTGCTTGGCTaGTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTG +
Preference number: 1 (lower is better)
Translates to: PGCSLTTPCPAHLLG*FLATLVQNYHTHPV
Trigger: CACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAGCAGCCAAGCAGGTGTGCCGGGCAGGGAGTTGTTAATGAACACCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp CTTGCCTGGGTGTTCATTAACAACTCCCTGCCCGGCACACCTGCTTaGCTGCTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCC +
Preference number: 1 (lower is better)
Translates to: LAWVFINNSLPGTPA*LLPGHPSAELPHTP
Trigger: GGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAGCAGCCAAGCAGGTGTGCCGGGCAGGGAGTTGTTAATGAACACCCAGGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp CTTTCCTGGATTTGCGGGCAATGGAAGTGGGAGTGGTGCCTGAAGTaGGCTCCTCCCCACCTCGTGGCATCACCTCTTCAGCAGAACAAG +
Preference number: 1 (lower is better)
Translates to: LSWICGQWKWEWCLK*APPHLVASPLQQNK
Trigger: CTTGTTCTGCTGAAGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTCCATTGCCCGCAAATCCAGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 90 bp ACCTCCCCAGGACTGGCCACGACCGACCCGTTGATTGCTTCTCAGTaGACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTG +
Preference number: 1 (lower is better)
Translates to: TSPGLATTDPLIASQ*TLVRRPVTFHPIFL
Trigger: CAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGGCCAGTCCTGGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR TCA 90 bp CATTTCTTTCCTGGATTTGCGGGCAATGGAAGTGGGAGTGGTGCCTaGAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTTCAGCAGA +
Preference number: 1 (lower is better)
Translates to: HFFPGFAGNGSGSGA*SELLPTSWHHLFSR
Trigger: TCTGCTGAAGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTCCATTGCCCGCAAATCCAGGAAAGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp GCTGAGGCACGAGAATCGCTTGAATCTGGGAAATGGAGGTTGCAGTaGGCCGAGATCACACCCCTGCACACCAACCTGGGAGACAAAGCA +
Preference number: 1 (lower is better)
Translates to: AEARESLESGKWRLQ*AEITPLHTNLGDKA
Trigger: TGCTTTGTCTCCCAGGTTGGTGTGCAGGGGTGTGATCTCGGCTCACTGCAACCTCCATTTCCCAGATTCAAGCGATTCTCGTGCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp AAAGAGGTAGCCCGTCTCTCCAGCACCCACATTCCTGGGCGAGGGTaGCACTCCAGTCAGAAGGTAAGAATCCCATGTAAGCGCTCTGTG +
Preference number: 1 (lower is better)
Translates to: KEVARLSSTHIPGRG*HSSQKVRIPCKRSV
Trigger: CACAGAGCGCTTACATGGGATTCTTACCTTCTGACTGGAGTGTCACCCTCGCCCAGGAATGTGGGTGCTGGAGAGACGGGCTACCTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp GCATTGCTAGCAAGCACCCAGGTGATGCTAATGTCGTCAGCCCACTaGCTACACTGGGCAGCAAGGGGCTGGACAATCTTCTATCCCTTG +
Preference number: 1 (lower is better)
Translates to: ALLASTQVMLMSSAH*LHWAARGWTIFYPL
Trigger: CAAGGGATAGAAGATTGTCCAGCCCCTTGCTGCCCAGTGTAGTCAGTGGGCTGACGACATTAGCATCACCTGGGTGCTTGCTAGCAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp TGCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTaGCCTCTGCAACGGGAGAGCCACAGGATCCCATGTAATTGCTGC +
Preference number: 1 (lower is better)
Translates to: CTLVRRPVTFHPIFL*PLQRESHRIPCNCC
Trigger: GCAGCAATTACATGGGATCCTGTGGCTCTCCCGTTGCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR GCA 90 bp CAAATTCATCCTCCCAGGGTCTCTTTTAAGCAACTCAACACTTTCTaGTGGCCACACTCAGGCTCAGGCCCGTCCTCTTGCCTGGGTGTT +
Preference number: 1 (lower is better)
Translates to: QIHPPRVSFKQLNTF*WPHSGSGPSSCLGV
Trigger: AACACCCAGGCAAGAGGACGGGCCTGAGCCTGAGTGTGGCCAGCAGAAAGTGTTGAGTTGCTTAAAAGAGACCCTGGGAGGATGAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp ATTCATCCTCCCAGGGTCTCTTTTAAGCAACTCAACACTTTCTGCTaGCCACACTCAGGCTCAGGCCCGTCCTCTTGCCTGGGTGTTCAT +
Preference number: 1 (lower is better)
Translates to: IHPPRVSFKQLNTFC*PHSGSGPSSCLGVH
Trigger: ATGAACACCCAGGCAAGAGGACGGGCCTGAGCCTGAGTGTGGCCAGCAGAAAGTGTTGAGTTGCTTAAAAGAGACCCTGGGAGGATGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp AGCGCAGAGCTGCCCAGACTGGCCAGGGACAAGACCTGGAGCTGCTaGGAAGCACAAAAGCTCATCCAATTTACTTCTCCCAGAAATATC +
Preference number: 1 (lower is better)
Translates to: SAELPRLARDKTWSC*EAQKLIQFTSPRNI
Trigger: GATATTTCTGGGAGAAGTAAATTGGATGAGCTTTTGTGCTTCCCAGCAGCTCCAGGTCTTGTCCCTGGCCAGTCTGGGCAGCTCTGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp CACGAGGCACCTGTTAAATACCAGCCTGTCTGCTCAGGTCACGCATaGGAGTTCTGCTTTGCTTGCACTCATACTCTGGACCTGTTGGTG +
Preference number: 1 (lower is better)
Translates to: HEAPVKYQPVCSGHA*EFCFACTHTLDLLV
Trigger: CACCAACAGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCATGCGTGACCTGAGCAGACAGGCTGGTATTTAACAGGTGCCTCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR GCA 90 bp CAGACTTCCGTCATATTAGCCACACGCCTCTTCTTGCCAGAGTCCTaGCTGGCTGCAGGTTCAGAATGGCCCGCAAAGTTTCAGAAAACA +
Preference number: 1 (lower is better)
Translates to: QTSVILATRLFLPES*LAAGSEWPAKFQKT
Trigger: TGTTTTCTGAAACTTTGCGGGCCATTCTGAACCTGCAGCCAGGCAGGACTCTGGCAAGAAGAGGCGTGTGGCTAATATGACGGAAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp AGAATCTTGGGTAGAGGAGCTATTCGTTGGAGAATTGTAGACCCTTaGCCTGGTCCGGTTACCCAAGGCTTGTTGTCCATGGTGGTGGTG +
Preference number: 1 (lower is better)
Translates to: RILGRGAIRWRIVDP*PGPVTQGLLSMVVV
Trigger: CACCACCACCATGGACAACAAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTACAATTCTCCAACGAATAGCTCCTCTACCCAAGATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR CCA 90 bp ACTGTGGCCAACCTCCATAGAATCTTGGGTAGAGGAGCTATTCGTTaGAGAATTGTAGACCCTTGGCCTGGTCCGGTTACCCAAGGCTTG +
Preference number: 1 (lower is better)
Translates to: TVANLHRILGRGAIR*RIVDPWPGPVTQGL
Trigger: CAAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTACAATTCTCCAACGAATAGCTCCTCTACCCAAGATTCTATGGAGGTTGGCCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR CCA 90 bp AACAGACTTTCCTTGGAGTGGGAGCAAAGGGTGGGGACTGGCCCCTaGATGCGTGATCACAAGGGTCTAATGACCATGCCTGTTCAAAAA +
Preference number: 1 (lower is better)
Translates to: NRLSLEWEQRVGTGP*MRDHKGLMTMPVQK
Trigger: TTTTTGAACAGGCATGGTCATTAGACCCTTGTGATCACGCATCCAGGGGCCAGTCCCCACCCTTTGCTCCCACTCCAAGGAAAGTCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp CAGTGCCTTCAACACAGGCATACGTCAAAAATTCCTGGTCCAGGGTaGAAGCCCAGTAGGCATCCACAGGCTGGTTCTCAGTGGATTCAT +
Preference number: 1 (lower is better)
Translates to: QCLQHRHTSKIPGPG*KPSRHPQAGSQWIH
Trigger: ATGAATCCACTGAGAACCAGCCTGTGGATGCCTACTGGGCTTTCACCCTGGACCAGGAATTTTTGACGTATGCCTGTGTTGAAGGCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp CCTTGTTCAAATGCAGATTCTCATCCAGTGGTCTGGGCTGGGGCCTaGGATTTTGCATTGCTAGCAAGCACCCAGGTGATGCTAATGTCG +
Preference number: 1 (lower is better)
Translates to: PCSNADSHPVVWAGA*DFALLASTQVMLMS
Trigger: CGACATTAGCATCACCTGGGTGCTTGCTAGCAATGCAAAATCTCAGGCCCCAGCCCAGACCACTGGATGAGAATCTGCATTTGAACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp GTGATCTCGAAAGTCAAGGTCAGCGTGGAGAACTGGAAAGAGGCCTaGCTAGAAGACAGACTGTCGCTGGTCAGTTGTGTCATCTTCTGC +
Preference number: 1 (lower is better)
Translates to: VISKVKVSVENWKEA*LEDRLSLVSCVIFC
Trigger: GCAGAAGATGACACAACTGACCAGCGACAGTCTGTCTTCTAGTCAGGCCTCTTTCCAGTTCTCCACGCTGACCTTGACTTTCGAGATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp GTCCATAGCTCCATTCTGTCCAAAGTCCAAGGTATTAGCAGCCACTaGGCGATTCTGGTAGGCCTGATTGCCTTGGTTACCAGTAGAGGA +
Preference number: 1 (lower is better)
Translates to: VHSSILSKVQGISSH*AILVGLIALVTSRG
Trigger: TCCTCTACTGGTAACCAAGGCAATCAGGCCTACCAGAATCGCCCAGTGGCTGCTAATACCTTGGACTTTGGACAGAATGGAGCTATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR CCA 90 bp CACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAAGCTaGAGGTCCCTCTTCCTTACAGTACTGCATTTCCGTGCCCAAGTG +
Preference number: 1 (lower is better)
Translates to: HNRPFHTAEDGVCGS*RSLFLTVLHFRAQV
Trigger: CACTTGGGCACGGAAATGCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR CCA 90 bp GAGAGGGAAACTGTAACTACTATACAGAGCTGGTGGCTGGTGCCCTaGGAAACCCTTCACCGGCTTACAAGACCAGATGAGACTGAGATA +
Preference number: 1 (lower is better)
Translates to: ERETVTTIQSWWLVP*ETLHRLTRPDETEI
Trigger: TATCTCAGTCTCATCTGGTCTTGTAAGCCGGTGAAGGGTTTCCCAGGGCACCAGCCACCAGCTCTGTATAGTAGTTACAGTTTCCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp CTCTTTGGGATTCTAGAGAGGGAAACTGTAACTACTATACAGAGCTaGTGGCTGGTGCCCTGGGAAACCCTTCACCGGCTTACAAGACCA +
Preference number: 1 (lower is better)
Translates to: LFGILERETVTTIQS*WLVPWETLHRLTRP
Trigger: TGGTCTTGTAAGCCGGTGAAGGGTTTCCCAGGGCACCAGCCACCAGCTCTGTATAGTAGTTACAGTTTCCCTCTCTAGAATCCCAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp TCATCCCCTTCGCCATCAGTTGCCTATATGAGAATGACCAGAAATTaGCCATTCCCAGGCCCGACTTTCCCCTCCTCCATCCATTCTTTC +
Preference number: 1 (lower is better)
Translates to: SSPSPSVAYMRMTRN*PFPGPTFPSSIHSF
Trigger: GAAAGAATGGATGGAGGAGGGGAAAGTCGGGCCTGGGAATGGCCAATTTCTGGTCATTCTCATATAGGCAACTGATGGCGAAGGGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp TACCACACACACCCAGTGCCTGCCACTTTATTTTGCCCTTGGCTCTaGATCTCCCGTGACTGCAGTTTCAGATATGGAATTCAGGGGCAA +
Preference number: 1 (lower is better)
Translates to: YHTHPVPATLFCPWL*ISRDCSFRYGIQGQ
Trigger: TTGCCCCTGAATTCCATATCTGAAACTGCAGTCACGGGAGATTCAGAGCCAAGGGCAAAATAAAGTGGCAGGCACTGGGTGTGTGTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 90 bp GGCTACCTGGTAAAAGCGAAGGGAAGCCGGTTTAAGACTTGTCTCTaGCTCCTCTATGCTTTGAAGAAGGATTCACAGGTTTTGCTGGGG +
Preference number: 1 (lower is better)
Translates to: GYLVKAKGSRFKTCL*LLYALKKDSQVLLG
Trigger: CCCCAGCAAAACCTGTGAATCCTTCTTCAAAGCATAGAGGAGGCAGAGACAAGTCTTAAACCGGCTTCCCTTCGCTTTTACCAGGTAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp TTTGGGATTCTAGAGAGGGAAACTGTAACTACTATACAGAGCTGGTaGCTGGTGCCCTGGGAAACCCTTCACCGGCTTACAAGACCAGAT +
Preference number: 1 (lower is better)
Translates to: FGILERETVTTIQSW*LVPWETLHRLTRPD
Trigger: ATCTGGTCTTGTAAGCCGGTGAAGGGTTTCCCAGGGCACCAGCCACCAGCTCTGTATAGTAGTTACAGTTTCCCTCTCTAGAATCCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp AGAATCCCATGTAAGCGCTCTGTGAAGAGCAAACCACCACTCAATTaGAATACAGTAGCAGTCCTGGAGGAATCCAGGACTCCAAGCGCA +
Preference number: 1 (lower is better)
Translates to: RIPCKRSVKSKPPLN*NTVAVLEESRTPSA
Trigger: TGCGCTTGGAGTCCTGGATTCCTCCAGGACTGCTACTGTATTCCAATTGAGTGGTGGTTTGCTCTTCACAGAGCGCTTACATGGGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp CCTGCATTCTGCGACTATCAAAATAAAGGCAGGCCCAAAGGAAACTaGGAAACTGGCCTAGAACTGAGTGCCTGCTATCTCGTCTTCGTG +
Preference number: 1 (lower is better)
Translates to: PAFCDYQNKGRPKGN*ETGLELSACYLVFV
Trigger: CACGAAGACGAGATAGCAGGCACTCAGTTCTAGGCCAGTTTCTCAGTTTCCTTTGGGCCTGCCTTTATTTTGATAGTCGCAGAATGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp AGGGTCACGAAGCCAATGAGAGGAGCAGTGGGATCTGAACCTCTTTaGGATTCTAGAGAGGGAAACTGTAACTACTATACAGAGCTGGTG +
Preference number: 1 (lower is better)
Translates to: RVTKPMRGAVGSEPL*DSREGNCNYYTELV
Trigger: CACCAGCTCTGTATAGTAGTTACAGTTTCCCTCTCTAGAATCCCAAAGAGGTTCAGATCCCACTGCTCCTCTCATTGGCTTCGTGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp AACAGGATGAGTTTCAACAGTGACCTGTGTAGGAGCTTCAGTGCCTaGCCAACCAAGAGGAGCAGGAAATTGCTGACGCACATTTCCTTA +
Preference number: 1 (lower is better)
Translates to: NRMSFNSDLCRSFSA*PTKRSRKLLTHISL
Trigger: TAAGGAAATGTGCGTCAGCAATTTCCTGCTCCTCTTGGTTGGTCAGGCACTGAAGCTCCTACACAGGTCACTGTTGAAACTCATCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR TCA 90 bp GCCAAAGAGAGCCAAACACACCAAGCGATGAGCCACTTACCTCAATaGACATGTCTTCCACAAAACAAGCATCCAGTGCCTTCAACACAG +
Preference number: 1 (lower is better)
Translates to: AKESQTHQAMSHLPQ*TCLPQNKHPVPSTQ
Trigger: CTGTGTTGAAGGCACTGGATGCTTGTTTTGTGGAAGACATGTTCATTGAGGTAAGTGGCTCATCGCTTGGTGTGTTTGGCTCTCTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 90 bp AAACTCAAGTTTCAATGTAGTCACGAGCTAGCTACAGGACTCTGTTaGACACAAACTCCTGTCATGGGGGACTCTTCTCTATCAGCCCCT +
Preference number: 1 (lower is better)
Translates to: KLKFQCSHELATGLC*TQTPVMGDSSLSAP
Trigger: AGGGGCTGATAGAGAAGAGTCCCCCATGACAGGAGTTTGTGTGCAACAGAGTCCTGTAGCTAGCTCGTGACTACATTGAAACTTGAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR GCA 90 bp TTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCATTTCCGTaGCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCC +
Preference number: 1 (lower is better)
Translates to: LWKLEVPLPYSTAFP*PSVFRGLKNPNFPP
Trigger: GGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR GCA 90 bp AACTTGGTACTGGCTCCTCAAATAAAGAGCAATAGCGGAGCAGTGTaGATAACATATGGTGACCCCTGTCATGAGAGTCAGGGGAAACCA +
Preference number: 1 (lower is better)
Translates to: NLVLAPQIKSNSGAV*ITYGDPCHESQGKP
Trigger: TGGTTTCCCCTGACTCTCATGACAGGGGTCACCATATGTTATGCACACTGCTCCGCTATTGCTCTTTATTTGAGGAGCCAGTACCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp GGGAGAAAGACCACAATTAGTGAATACGCACGTGGGAGCCCTCCCTaGACAAGCTCCTCATCTGAATTCTTCAAGACTACAGAAGATGTT +
Preference number: 1 (lower is better)
Translates to: GRKTTISEYARGSPP*TSSSSEFFKTTEDV
Trigger: AACATCTTCTGTAGTCTTGAAGAATTCAGATGAGGAGCTTGTCCAGGGAGGGCTCCCACGTGCGTATTCACTAATTGTGGTCTTTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp TCTAGTGAAGATGGTCAGAACTCTAATACGCAAACAAAACCGAGCTaGGGAGAAAGACCACAATTAGTGAATACGCACGTGGGAGCCCTC +
Preference number: 1 (lower is better)
Translates to: SSEDGQNSNTQTKPS*GERPQLVNTHVGAL
Trigger: GAGGGCTCCCACGTGCGTATTCACTAATTGTGGTCTTTCTCCCCAGCTCGGTTTTGTTTGCGTATTAGAGTTCTGACCATCTTCACTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp TGGGCTCCACTTGTCTTGTCCACTTGTTTCCTCTGTCCTGCATCATaGACTTTTGCCACCACTTTGCCTGACCCAAACTTAATGCACTTT +
Preference number: 1 (lower is better)
Translates to: WAPLVLSTCFLCPAS*TFATTLPDPNLMHF
Trigger: AAAGTGCATTAAGTTTGGGTCAGGCAAAGTGGTGGCAAAAGTTCATGATGCAGGACAGAGGAAACAAGTGGACAAGACAAGTGGAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp TCTAAAGTGAGGTGTTGGGGCAGTGTCTCTGACTTTGAATGTGCATaGATGACCTGGGGACCTTGTTCAAATGCAGATTCTCATCCAGTG +
Preference number: 1 (lower is better)
Translates to: SKVRCWGSVSDFECA*MTWGPCSNADSHPV
Trigger: CACTGGATGAGAATCTGCATTTGAACAAGGTCCCCAGGTCATTCATGCACATTCAAAGTCAGAGACACTGCCCCAACACCTCACTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 90 bp AGCCCTCCACGGAGAACACTGTCCACCTCATTTCCCTGCATTGTTTaGTGTATTTACGTAGAAAAAGAAGTTCCATTCAGGCTGTGGACT +
Preference number: 1 (lower is better)
Translates to: SPPRRTLSTSFPCIV*CIYVEKEVPFRLWT
Trigger: AGTCCACAGCCTGAATGGAACTTCTTTTTCTACGTAAATACAGCAAACAATGCAGGGAAATGAGGTGGACAGTGTTCTCCGTGGAGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp AGTCATGTAATGTGCAGGACCTGTATTAGCAGAAAATTGGTATGTTaGATGTCCAGCTATGCCAGTCTCTTGGCGGGGATTGGAGTAGAC +
Preference number: 1 (lower is better)
Translates to: SHVMCRTCISRKLVC*MSSYASLLAGIGVD
Trigger: GTCTACTCCAATCCCCGCCAAGAGACTGGCATAGCTGGACATCCAACATACCAATTTTCTGCTAATACAGGTCCTGCACATTACATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR CCA 90 bp GCTCAGGTCACGCATGAGAGTTCTGCTTTGCTTGCACTCATACTCTaGACCTGTTGGTGCAATCAAGGTCTTGCTTTCAAGTTTACAAGT +
Preference number: 1 (lower is better)
Translates to: AQVTHESSALLALIL*TCWCNQGLAFKFTS
Trigger: ACTTGTAAACTTGAAAGCAAGACCTTGATTGCACCAACAGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCATGCGTGACCTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR TCA 90 bp CCTTGGCTATGCATAATGCCAAAGAGAGCCAAACACACCAAGCGATaGGCCACTTACCTCAATGAACATGTCTTCCACAAAACAAGCATC +
Preference number: 1 (lower is better)
Translates to: PWLCIMPKRAKHTKR*ATYLNEHVFHKTSI
Trigger: GATGCTTGTTTTGTGGAAGACATGTTCATTGAGGTAAGTGGCTCATCGCTTGGTGTGTTTGGCTCTCTTTGGCATTATGCATAGCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 90 bp ATCAGCCCCTTGCCTCATTGTCAGATGTCCTTCAGTCATGTAATGTaGAGGACCTGTATTAGCAGAAAATTGGTATGTTGGATGTCCAGC +
Preference number: 1 (lower is better)
Translates to: ISPLPHCQMSFSHVM*RTCISRKLVCWMSS
Trigger: GCTGGACATCCAACATACCAATTTTCTGCTAATACAGGTCCTGCACATTACATGACTGAAGGACATCTGACAATGAGGCAAGGGGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR GCA 90 bp CTACAGAAGATGTTAAGTAGCTGTCATTACATAATCAGTGGGAGATaGCTTCAGAAACATCCGCCTACAGAAAGAGGTAGCCCGTCTCTC +
Preference number: 1 (lower is better)
Translates to: LQKMLSSCHYIISGR*LQKHPPTERGSPSL
Trigger: GAGAGACGGGCTACCTCTTTCTGTAGGCGGATGTTTCTGAAGGCATCTCCCACTGATTATGTAATGACAGCTACTTAACATCTTCTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 90 bp ATGAGTCTTGAACTTGTATTCTGTCTATGGGGATACCACCCAGAATaGACCGGATCGCATCTGAACCTGCATTCTGCGACTATCAAAATA +
Preference number: 1 (lower is better)
Translates to: MSLELVFCLWGYHPE*TGSHLNLHSATIKI
Trigger: TATTTTGATAGTCGCAGAATGCAGGTTCAGATGCGATCCGGTGCATTCTGGGTGGTATCCCCATAGACAGAATACAAGTTCAAGACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 90 bp ATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATTTCCCTaGATTGTTTGCTGTATTTACGTAGAAAAAGAAGTTCCATTCAGG +
Preference number: 1 (lower is better)
Translates to: MLFSPPRRTLSTSFP*IVCCIYVEKEVPFR
Trigger: CCTGAATGGAACTTCTTTTTCTACGTAAATACAGCAAACAATGCAGGGAAATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 90 bp CATGAGAGTTCTGCTTTGCTTGCACTCATACTCTGGACCTGTTGGTaGAATCAAGGTCTTGCTTTCAAGTTTACAAGTAGGTTAATCAGG +
Preference number: 1 (lower is better)
Translates to: HESSALLALILWTCW*NQGLAFKFTSRLIR
Trigger: CCTGATTAACCTACTTGTAAACTTGAAAGCAAGACCTTGATTGCACCAACAGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR GCA 90 bp ATTATATTTATCGGACACTTTCTACATACTAGGCATTGTGCTTTCTaGGGACATTACCTCACTGAGGCATGCACAGCATCTCCTAAGTGG +
Preference number: 1 (lower is better)
Translates to: IIFIGHFLHTRHCAF*GHYLTEACTASPKW
Trigger: CCACTTAGGAGATGCTGTGCATGCCTCAGTGAGGTAATGTCCGCAGAAAGCACAATGCCTAGTATGTAGAAAGTGTCCGATAAATATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp AGGTTAATCAGGAATACAAGAATCAACTGCTGGTTCCATAGCTTCTaGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGA +
Preference number: 1 (lower is better)
Translates to: RLIRNTRINCWFHSF*IQCPFTFRSLNTLR
Trigger: TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCAGCAGTTGATTCTTGTATTCCTGATTAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR CCA 90 bp ACGCATGAGAGTTCTGCTTTGCTTGCACTCATACTCTGGACCTGTTaGTGCAATCAAGGTCTTGCTTTCAAGTTTACAAGTAGGTTAATC +
Preference number: 1 (lower is better)
Translates to: THESSALLALILWTC*CNQGLAFKFTSRLI
Trigger: GATTAACCTACTTGTAAACTTGAAAGCAAGACCTTGATTGCACCAACAGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCATGCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR TCA 90 bp GGACACAGCTGTAGCTATTTCCATCAAAGCAAACCACTACTTCTGTaGCCTTCAACCAATAAGGAAGTCAACTTTATGACACACGCAAAG +
Preference number: 1 (lower is better)
Translates to: GHSCSYFHQSKPLLL*PSTNKEVNFMTHAK
Trigger: CTTTGCGTGTGTCATAAAGTTGACTTCCTTATTGGTTGAAGGTCACAGAAGTAGTGGTTTGCTTTGATGGAAATAGCTACAGCTGTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR GCA 90 bp CTGCACCTGGTTGTATTGTGTTCCTTAGGACAGCTACCATGTCATTaGACTTTGCTGCCTAATTCAGTAACAATTCATACTCCATTGTAC +
Preference number: 1 (lower is better)
Translates to: LHLVVLCSLGQLPCH*TLLPNSVTIHTPLY
Trigger: GTACAATGGAGTATGAATTGTTACTGAATTAGGCAGCAAAGTGCAATGACATGGTAGCTGTCCTAAGGAACACAATACAACCAGGTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp ATTCCACACCTGATAACAGGGACATACCCTAAAGATGGGAAATTATaGGGAAAAATTTTCAGGTACAGCAGCTGCATACTGGAAGAGAGA +
Preference number: 1 (lower is better)
Translates to: IPHLITGTYPKDGKL*GKIFRYSSCILEER
Trigger: TCTCTCTTCCAGTATGCAGCTGCTGTACCTGAAAATTTTTCCCCATAATTTCCCATCTTTAGGGTATGTCCCTGTTATCAGGTGTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp GAAGAAGGATTCACAGGTTTTGCTGGGGATGACAGGAAATTCAACTaGAATGGAAATTTACCCACATTAATTCCACACCTGATAACAGGG +
Preference number: 1 (lower is better)
Translates to: EEGFTGFAGDDRKFN*NGNLPTLIPHLITG
Trigger: CCCTGTTATCAGGTGTGGAATTAATGTGGGTAAATTTCCATTTCAGTTGAATTTCCTGTCATCCCCAGCAAAACCTGTGAATCCTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp TTCAAGTTTACAAGTAGGTTAATCAGGAATACAAGAATCAACTGCTaGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGC +
Preference number: 1 (lower is better)
Translates to: FKFTSRLIRNTRINC*FHSFWIQCPFTFRS
Trigger: GCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCAGCAGTTGATTCTTGTATTCCTGATTAACCTACTTGTAAACTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR TCA 90 bp GGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTaGACACACTTAGAATGTAACAGATGTTGTAATCTTGAATTAGAT +
Preference number: 1 (lower is better)
Translates to: GSIASGSSVPLPSEA*THLECNRCCNLELD
Trigger: ATCTAATTCAAGATTACAACATCTGTTACATTCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR TCA 90 bp AATTCTGCCACAGTAGCACCAAAGTGGCCGTGGACAACTTGCAAATaGATGTGGTTATGTTCCAATAAAACTTCATTTATGGACACTGAA +
Preference number: 1 (lower is better)
Translates to: NSATVAPKWPWTTCK*MWLCSNKTSFMDTE
Trigger: TTCAGTGTCCATAAATGAAGTTTTATTGGAACATAACCACATTCATTTGCAAGTTGTCCACGGCCACTTTGGTGCTACTGTGGCAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp CAGGCCATGTCGGGATATTCAGCTAATATTTCTGACAAAAATTCATaGGAGCTGTTGATAGTGAAGTCCACAAGAGCTAAAGGAAGTTCA +
Preference number: 1 (lower is better)
Translates to: QAMSGYSANISDKNS*ELLIVKSTRAKGSS
Trigger: TGAACTTCCTTTAGCTCTTGTGGACTTCACTATCAACAGCTCTCATGAATTTTTGTCAGAAATATTAGCTGAATATCCCGACATGGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp TGCCTTTTTAGTCGACTACTGATGTCATTCCTAATGTCAACTCTTTaGGCAACTGTTGTCGTGGAAAGGCCAATAAACAAGTTTACTTTC +
Preference number: 1 (lower is better)
Translates to: CLFSRLLMSFLMSTL*ATVVVERPINKFTF
Trigger: GAAAGTAAACTTGTTTATTGGCCTTTCCACGACAACAGTTGCTCAAAGAGTTGACATTAGGAATGACATCAGTAGTCGACTAAAAAGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp ATTGTTTGCTGTATTTACGTAGAAAAAGAAGTTCCATTCAGGCTGTaGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACACTTTC +
Preference number: 1 (lower is better)
Translates to: IVCCIYVEKEVPFRL*TPLFSRILYLSDTF
Trigger: GAAAGTGTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAACTTCTTTTTCTACGTAAATACAGCAAACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp TCCCGTGACTGCAGTTTCAGATATGGAATTCAGGGGCAAGTACACTaGCTAATGAATGAGTATATAATGGAAGCAAAACTTTACAAGAAT +
Preference number: 1 (lower is better)
Translates to: SRDCSFRYGIQGQVH*LMNEYIMEAKLYKN
Trigger: ATTCTTGTAAAGTTTTGCTTCCATTATATACTCATTCATTAGTCAGTGTACTTGCCCCTGAATTCCATATCTGAAACTGCAGTCACGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp CAAAAGCTCATCCAATTTACTTCTCCCAGAAATATCTTATCTACCTaGAGTGAACAGTTAAATCCCATGATTAGGTCCCTTGTTTCAGCT +
Preference number: 1 (lower is better)
Translates to: QKLIQFTSPRNILST*SEQLNPMIRSLVSA
Trigger: AGCTGAAACAAGGGACCTAATCATGGGATTTAACTGTTCACTTCAGGTAGATAAGATATTTCTGGGAGAAGTAAATTGGATGAGCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 90 bp AAATTTAATCGGGAAGATTATCAAATAGCTGGTCTTTCAGACAGATaGAACATTAAGCACTTATACCTACACGGCCTTTCTCTAGCTATG +
Preference number: 1 (lower is better)
Translates to: KFNREDYQIAGLSDR*NIKHLYLHGLSLAM
Trigger: CATAGCTAGAGAAAGGCCGTGTAGGTATAAGTGCTTAATGTTTCATCTGTCTGAAAGACCAGCTATTTGATAATCTTCCCGATTAAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 90 bp AATATAAAAATTTCTTTTGGGTTTGCATTGAGGTCCCTAACACACTaGTCAAACTGTAGTTTGGGCTCAGATAATGTATCTGTGGCAAAT +
Preference number: 1 (lower is better)
Translates to: NIKISFGFALRSLTH*SNCSLGSDNVSVAN
Trigger: ATTTGCCACAGATACATTATCTGAGCCCAAACTACAGTTTGAGCAGTGTGTTAGGGACCTCAATGCAAACCCAAAAGAAATTTTTATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 90 bp TGGTCTAGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTaGTTACAGACATCTATGTGCTATAAAAACAGCTTTGGTACAATA +
Preference number: 1 (lower is better)
Translates to: WSSYTLCQSAELLHY*LQTSMCYKNSFGTI
Trigger: TATTGTACCAAAGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACTAGACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR CCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTCCATGCGAACAGAGCTaGGCTCCACTTGTCTTGTCC +
Preference number: 2 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSPCEQS*APLVLS
Trigger: GGACAAGACAAGTGGAGCCCAGCTCTGTTCGCATGG...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 90 bp AAGACCACCACTCAGACCTCCCCAGGACTGGCCACGACCGACCCGTaGATTGCTTCTCAGTGCACCTTGGTTAGGAGACCAGTCACGTTC +
Preference number: 2 (lower is better)
Translates to: KTTTQTSPGLATTDP*IASQCTLVRRPVTF
Trigger: GAACGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGGCCAGTCCTGGGGAGGTCTGAGTGGTGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR CAA 90 bp ACTCAACACTTTCTGCTGGCCACACTCAGGCTCAGGCCCGTCCTCTaGCCTGGGTGTTCATTAACAACTCCCTGCCCGGCACACCTGCTT +
Preference number: 2 (lower is better)
Translates to: TQHFLLATLRLRPVL*PGCSLTTPCPAHLL
Trigger: AAGCAGGTGTGCCGGGCAGGGAGTTGTTAATGAACACCCAGGCAAGAGGACGGGCCTGAGCCTGAGTGTGGCCAGCAGAAAGTGTTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTTGCTCAGGTCACGCATaGGAGTTCTGCTTTGCTTGC +
Preference number: 2 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSCSGHA*EFCFAC
Trigger: GCAAGCAAAGCAGAACTCTCATGCGTGACCTGAGCA...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTCACCAAACTCCAGCTTaGGTGACAAAGCCAGACACC +
Preference number: 2 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSHQTPA*VTKPDT
Trigger: GGTGTCTGGCTTTGTCACGCAAGCTGGAGTTTGGTG...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTGCCCGTCCTCTTGCCTaGGTGTTCATTAACAACTCC +
Preference number: 2 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSARPLA*VFINNS
Trigger: GGAGTTGTTAATGAACACCCAGGCAAGAGGACGGGC...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 90 bp CGTTGGAGAATTGTAGACCCTTGGCCTGGTCCGGTTACCCAAGGCTaGTTGTCCATGGTGGTGGTGATGGTGGTGGTGGTGGTGATGGTG +
Preference number: 2 (lower is better)
Translates to: RWRIVDPWPGPVTQG*LSMVVVMVVVVVMV
Trigger: CACCATCACCACCACCACCACCATCACCACCACCATGGACAACAAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTACAATTCTCCAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR CAA 90 bp CCAGGACTGGCCACGACCGACCCGTTGATTGCTTCTCAGTGCACCTaGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCT +
Preference number: 2 (lower is better)
Translates to: PGLATTDPLIASQCT*VRRPVTFHPIFLWP
Trigger: AGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGGCCAGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR TCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTCTCCTCTACTCTCCCTaGCACCAAAGGTTTTCCAAC +
Preference number: 2 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSLLYSP*HQRFSN
Trigger: GTTGGAAAACCTTTGGTGTCAGGGAGAGTAGAGGAG...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 90 bp TGGAGAATTGTAGACCCTTGGCCTGGTCCGGTTACCCAAGGCTTGTaGTCCATGGTGGTGGTGATGGTGGTGGTGGTGGTGATGGTGATG +
Preference number: 2 (lower is better)
Translates to: WRIVDPWPGPVTQGL*SMVVVMVVVVVMVM
Trigger: CATCACCATCACCACCACCACCACCATCACCACCACCATGGACAACAAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTACAATTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR GCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTAGGCCAACCACACCCATaGCAGCATCGCCCGGCCTCC +
Preference number: 2 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLGQPHP*QHRPAS
Trigger: GGAGGCCGGGCGATGCTGGCATGGGTGTGGTTGGCC...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCGGTATTAGCAGCCACTaGGCGATTCTGGTAGGCCTG +
Preference number: 2 (lower is better)
Translates to: APWLGDQSRSILSSCGLCGISSH*AILVGL
Trigger: CAGGCCTACCAGAATCGCCCAGTGGCTGCTAATACC...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR CAA 90 bp CGGCCTCCCATGCGAACAGAGCTGGGCTCCACTTGTCTTGTCCACTaGTTTCCTCTGTCCTGCATCATGAACTTTTGCCACCACTTTGCC +
Preference number: 2 (lower is better)
Translates to: RPPMRTELGSTCLVH*FPLSCIMNFCHHFA
Trigger: GGCAAAGTGGTGGCAAAAGTTCATGATGCAGGACAGAGGAAACAAGTGGACAAGACAAGTGGAGCCCAGCTCTGTTCGCATGGGAGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 90 bp AGTCCTTGGATTCAGACTTCCGTCATATTAGCCACACGCCTCTTCTaGCCAGAGTCCTGCCTGGCTGCAGGTTCAGAATGGCCCGCAAAG +
Preference number: 2 (lower is better)
Translates to: SPWIQTSVILATRLF*PESCLAAGSEWPAK
Trigger: CTTTGCGGGCCATTCTGAACCTGCAGCCAGGCAGGACTCTGGCAAGAAGAGGCGTGTGGCTAATATGACGGAAGTCTGAATCCAAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTCTTCTCAGTGCACCTTaGTTAGGAGACCAGTCACGT +
Preference number: 2 (lower is better)
Translates to: LPGHPSAELPHTPSACHFLLSAP*LGDQSR
Trigger: ACGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAG...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTCTTGCACTCATACTCTaGACCTGTTGGTGCAATCAA +
Preference number: 2 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSLALIL*TCWCNQ
Trigger: TTGATTGCACCAACAGGTCCAGAGTATGAGTGCAAG...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTCTCTGTCCTGCATCATaGACTTTTGCCACCACTTTG +
Preference number: 2 (lower is better)
Translates to: LPGHPSAELPHTPSACHFLCPAS*TFATTL
Trigger: CAAAGTGGTGGCAAAAGTTCATGATGCAGGACAGAG...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCTGCCAGAGTCCTGCCTaGCTGCAGGTTCAGAATGGC +
Preference number: 2 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFCQSPA*LQVQNG
Trigger: GCCATTCTGAACCTGCAGCCAGGCAGGACTCTGGCA...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTGCCAGGGACAAGACCTaGAGCTGCTGGGAAGCACAA +
Preference number: 2 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSARDKT*SCWEAQ
Trigger: TTGTGCTTCCCAGCAGCTCCAGGTCTTGTCCCTGGC...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCCGTGGGAGCCCTCCCTaGACAAGCTCCTCATCTGAA +
Preference number: 2 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFRGSPP*TSSSSE
Trigger: TTCAGATGAGGAGCTTGTCCAGGGAGGGCTCCCACG...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATCAGCCTATTTATGTTTaGGAGGCCCAGGCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHQPIYV*EAQAGG
Trigger: TCCTCCAGCCTGGGCCTCTCAAACATAAATAGGCTG...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCTGGCCCCTGGATGCGTaGTCACAAGGGTCTAATGAC +
Preference number: 2 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFWPLDA*SQGSND
Trigger: GTCATTAGACCCTTGTGATCACGCATCCAGGGGCCA...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTCCCCGCCACTCAGCATaGTTACTGTGCCTGACAAAC +
Preference number: 2 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSPRHSA*LLCLTN
Trigger: GTTTGTCAGGCACAGTAAGCATGCTGAGTGGCGGGG...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTGGTGGAGATACCACGTaGCGAGAAAAAGCAAAAGAA +
Preference number: 2 (lower is better)
Translates to: LPGHPSAELPHTPSACHFGGDTT*REKAKE
Trigger: TTCTTTTGCTTTTTCTCGGCACGTGGTATCTCCACC...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTTGGATTTGCGGGCAATaGAAGTGGGAGTGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSWICGQ*KWEWCL
Trigger: CAGGCACCACTCCCACTTCCATTGCCCGCAAATCCA...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTGGAGGCCAAGGCAGATaGATCACAAGGTCAGGAGAC +
Preference number: 2 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSGGQGR*ITRSGD
Trigger: GTCTCCTGACCTTGTGATCCATCTGCCTTGGCCTCC...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 90 bp CAGGGATGTCATGGAGTGGTGACTGTGGCCAACCTCCATAGAATCTaGGGTAGAGGAGCTATTCGTTGGAGAATTGTAGACCCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: QGCHGVVTVANLHRI*GRGAIRWRIVDPWP
Trigger: AGGCCAAGGGTCTACAATTCTCCAACGAATAGCTCCTCTACCCAAGATTCTATGGAGGTTGGCCACAGTCACCACTCCATGACATCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR CAA 90 bp GTCATCCCCTTCGCCATCAGTTGCCTATATGAGAATGACCAGAAATaGGCCATTCCCAGGCCCGACTTTCCCCTCCTCCATCCATTCTTT +
Preference number: 2 (lower is better)
Translates to: VIPFAISCLYENDQK*AIPRPDFPLLHPFF
Trigger: AAAGAATGGATGGAGGAGGGGAAAGTCGGGCCTGGGAATGGCCAATTTCTGGTCATTCTCATATAGGCAACTGATGGCGAAGGGGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAAGGAGCTTCAGTGCCTaGCCAACCAAGAGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAERSFSA*PTKRSR
Trigger: CCTGCTCCTCTTGGTTGGTCAGGCACTGAAGCTCCT...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR TCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATGGCACGAGAATCGCTTaGATCTGGGAAATGGAGGTT +
Preference number: 2 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHGTRIA*IWEMEV
Trigger: AACCTCCATTTCCCAGATTCAAGCGATTCTCGTGCC...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTGGATACCACCCAGAATaGACCGGATCGCATCTGAAC +
Preference number: 2 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSGYHPE*TGSHLN
Trigger: GTTCAGATGCGATCCGGTGCATTCTGGGTGGTATCC...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTGACAAGACCTGGAGCTaGTGGGAAGCACAAAAGCTC +
Preference number: 2 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSDKTWS*WEAQKL
Trigger: GAGCTTTTGTGCTTCCCAGCAGCTCCAGGTCTTGTC...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 90 bp TTGCACACAAACTCCTGTCATGGGGGACTCTTCTCTATCAGCCCCTaGCCTCATTGTCAGATGTCCTTCAGTCATGTAATGTGCAGGACC +
Preference number: 2 (lower is better)
Translates to: LHTNSCHGGLFSISP*PHCQMSFSHVMCRT
Trigger: GGTCCTGCACATTACATGACTGAAGGACATCTGACAATGAGGCAAGGGGCTGATAGAGAAGAGTCCCCCATGACAGGAGTTTGTGTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR CAA 90 bp ATACCAGCCTGTCTGCTCAGGTCACGCATGAGAGTTCTGCTTTGCTaGCACTCATACTCTGGACCTGTTGGTGCAATCAAGGTCTTGCTT +
Preference number: 2 (lower is better)
Translates to: IPACLLRSRMRVLLC*HSYSGPVGAIKVLL
Trigger: AAGCAAGACCTTGATTGCACCAACAGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCATGCGTGACCTGAGCAGACAGGCTGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR TCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACGCACCGGATCGCATCTaGACCTGCATTCTGCGACTA +
Preference number: 2 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDAPDRI*TCILRL
Trigger: TAGTCGCAGAATGCAGGTTCAGATGCGATCCGGTGC...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCGCTCTGAATCTCCCGTaGCTGCAGTTTCAGATATGG +
Preference number: 2 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFALNLP*LQFQIW
Trigger: CCATATCTGAAACTGCAGTCACGGGAGATTCAGAGC...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGACCCCGCCACTCAGCATaGTTACTGTGCCTGACAAAC +
Preference number: 2 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRPRHSA*LLCLTN
Trigger: GTTTGTCAGGCACAGTAAGCATGCTGAGTGGCGGGG...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR CCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATTGGTTCCATAGCTTCTaGATCCAGTGTCCCTTTACC +
Preference number: 2 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHWFHSF*IQCPFT
Trigger: GGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGCCACGACCGACCCGTTaGTTGCTTCTCAGTGCACCT +
Preference number: 2 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKPRPTR*LLLSAP
Trigger: AGGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGG...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR TCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTTTTCTAGGCTTCTTTTaGTCCTGGACAGGTAAATTA +
Preference number: 2 (lower is better)
Translates to: LPGHPSAELPHTPSACHFFLGFF*SWTGKL
Trigger: TAATTTACCTGTCCAGGATCAAAAGAAGCCTAGAAA...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGTCTTCCTGTGGCCTCTaGAACGGGAGAGCCACAGGA +
Preference number: 2 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKSSCGL*NGRATG
Trigger: TCCTGTGGCTCTCCCGTTGCAGAGGCCACAGGAAGA...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR GCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTACACCAAACTCCAGCTTaGGTGACAAAGCCAGACACC +
Preference number: 2 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLHQTPA*VTKPDT
Trigger: GGTGTCTGGCTTTGTCACGCAAGCTGGAGTTTGGTG...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTACATCTGGCAATTTCTaGCTTTCCCGGAGGCTTGTT +
Preference number: 2 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSTSGNF*LSRRLV
Trigger: AACAAGCCTCCGGGAAAGGCAGAAATTGCCAGATGT...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCAAAGACAGGGATGTCATaGAGTGGTGACTGTGGCCAA +
Preference number: 2 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPKTGMS*SGDCGQ
Trigger: TTGGCCACAGTCACCACTCCATGACATCCCTGTCTT...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR CCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTACTGTGACTGGGATGTaGCAAGTTAAAATGGGGGAG +
Preference number: 2 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSTVTGM*QVKMGE
Trigger: CTCCCCCATTTTAACTTGCCACATCCCAGTCACAGT...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp CACTGCAATTTACATTGCACAGAGCGGCAGGGCAAAATGATGAGAATGCCACATCCCTGCACACCAACCTaGGAGACAAAGCAAGACTGT +
Preference number: 2 (lower is better)
Translates to: HCNLHCTERQGKMMRMPHPCTPT*ETKQDC
Trigger: ACAGTCTTGCTTTGTCTCCCAGGTTGGTGTGCAGGG...ATGTGGCATTCTCATCATTTTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACACTACTATACAGAGCTaGTGGCTGGTGCCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDTTIQS*WLVPWE
Trigger: TTCCCAGGGCACCAGCCACCAGCTCTGTATAGTAGT...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp CACTGCAATTTACATTGCACAGAGCGGCAGGGCAAAATGATGAGAATGCCACATTCCAGTGGTCTGGGCTaGGGCCTGAGATTTTGCATT +
Preference number: 2 (lower is better)
Translates to: HCNLHCTERQGKMMRMPHSSGLG*GLRFCI
Trigger: AATGCAAAATCTCAGGCCCCAGCCCAGACCACTGGA...ATGTGGCATTCTCATCATTTTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 90 bp TTAAATACCAGCCTGTCTGCTCAGGTCACGCATGAGAGTTCTGCTTaGCTTGCACTCATACTCTGGACCTGTTGGTGCAATCAAGGTCTT +
Preference number: 2 (lower is better)
Translates to: LNTSLSAQVTHESSA*LALILWTCWCNQGL
Trigger: AAGACCTTGATTGCACCAACAGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCATGCGTGACCTGAGCAGACAGGCTGGTATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR CAA 90 bp GCGAAGGGAAGCCGGTTTAAGACTTGTCTCTGCCTCCTCTATGCTTaGAAGAAGGATTCACAGGTTTTGCTGGGGATGACAGGAAATTCA +
Preference number: 2 (lower is better)
Translates to: AKGSRFKTCLCLLYA*KKDSQVLLGMTGNS
Trigger: TGAATTTCCTGTCATCCCCAGCAAAACCTGTGAATCCTTCTTCAAAGCATAGAGGAGGCAGAGACAAGTCTTAAACCGGCTTCCCTTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 90 bp AGCTCCTCCCCACCTCGTGGCATCACCTCTTCAGCAGAACAAGGCTaGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAC +
Preference number: 2 (lower is better)
Translates to: SSSPPRGITSSAEQG*SVMYIKTLFLMLFH
Trigger: GTGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCTGCTGAAGAGGTGATGCCACGAGGTGGGGAGGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTGTGTTAATCTCCTCCTaGTTCAAGCAGCTTTGCACT +
Preference number: 2 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSVLISS*FKQLCT
Trigger: AGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACAC...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACCCTCTGAGCTATCCATaGAGATGGGTTTGGACATGG +
Preference number: 2 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDPLSYP*RWVWTW
Trigger: CCATGTCCAAACCCATCTTCATGGATAGCTCAGAGG...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCAAAAGAGGATACCTCTaGGCTATCCATGAAGATGGG +
Preference number: 2 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFKRGYL*AIHEDG
Trigger: CCCATCTTCATGGATAGCTCAGAGGTATCCTCTTTT...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTAATAGGATGTTACACTaGCCCATCTCCACAAGGGAA +
Preference number: 2 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSNRMLH*PISTRE
Trigger: TTCCCTTGTGGAGATGGGTCAGTGTAACATCCTATT...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp CACTGCAATTTACATTGCACAGAGCGGCAGGGCAAAATGATGAGAATGCCACATTCCAGGCAGTCTCCCTaGGGTTGTACAGAGAAATTC +
Preference number: 2 (lower is better)
Translates to: HCNLHCTERQGKMMRMPHSRQSP*GCTEKF
Trigger: GAATTTCTCTGTACAACCTCAGGGAGACTGCCTGGA...ATGTGGCATTCTCATCATTTTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCTCTTCCTTACAGTACTaGATTTCCGTGCCCAAGTGT +
Preference number: 2 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFSSLQY*ISVPKC
Trigger: ACACTTGGGCACGGAAATGCAGTACTGTAAGGAAGA...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCTCAGCATGCTTACTGTaGCTGACAAACTTCACCACA +
Preference number: 2 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFSACLL*LTNFTT
Trigger: TGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGA...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATATGAGAGTTCTGCTTTaGTTGCACTCATACTCTGGA +
Preference number: 2 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHMRVLL*LHSYSG
Trigger: TCCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCAT...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTAACCACACACACCCAGTaGCTGCCACTTTATTTTGCC +
Preference number: 2 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLTTHTQ*LPLYFA
Trigger: GGCAAAATAAAGTGGCAGGCACTGGGTGTGTGTGGT...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCAGAATTGTAGACCCTTaGCCTGGTCCGGTTACCCAA +
Preference number: 2 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSRIVDP*PGPVTQ
Trigger: TTGGGTAACCGGACCAGGCCAAGGGTCTACAATTCT...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR CCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCACCTCCATAGAATCTTaGGTAGAGGAGCTATTCGTT +
Preference number: 2 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCTSIES*VEELFV
Trigger: AACGAATAGCTCCTCTACCCAAGATTCTATGGAGGT...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR CCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCCTTGTATTCTGTCTATaGGGATACCACCCAGAATGC +
Preference number: 2 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFLVFCL*GYHPEC
Trigger: GCATTCTGGGTGGTATCCCCATAGACAGAATACAAG...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATAAATCAGCGTCCAGTTaGAGAAACACTTTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHKSASS*RNTLSP
Trigger: AGGAGACAAAGTGTTTCTCCAACTGGACGCTGATTT...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp CACTGCAATTTACATTGCACAGAGCGGCAGGGCAAAATGATGAGAATGCCACATAAGACCTGGAGCTGCTaGGAAGCACAAAAGCTCATC +
Preference number: 2 (lower is better)
Translates to: HCNLHCTERQGKMMRMPHKTWSC*EAQKLI
Trigger: GATGAGCTTTTGTGCTTCCCAGCAGCTCCAGGTCTT...ATGTGGCATTCTCATCATTTTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 90 bp ATTAGCAGAAAATTGGTATGTTGGATGTCCAGCTATGCCAGTCTCTaGGCGGGGATTGGAGTAGACGGTCAAATTAACGTCCATAGCTCC +
Preference number: 2 (lower is better)
Translates to: ISRKLVCWMSSYASL*AGIGVDGQINVHSS
Trigger: GGAGCTATGGACGTTAATTTGACCGTCTACTCCAATCCCCGCCAAGAGACTGGCATAGCTGGACATCCAACATACCAATTTTCTGCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR TCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAAAAAGAGGATACCTCTaGGCTATCCATGAAGATGGG +
Preference number: 2 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTKRGYL*AIHEDG
Trigger: CCCATCTTCATGGATAGCTCAGAGGTATCCTCTTTT...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR GCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGATCTTCCTGTGGCCTCTaGAACGGGAGAGCCACAGGA +
Preference number: 2 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRSSCGL*NGRATG
Trigger: TCCTGTGGCTCTCCCGTTGCAGAGGCCACAGGAAGA...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCGACCGACCCGTTGATTaGTTCTCAGTGCACCTTGGT +
Preference number: 2 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFDRPVD*FSVHLG
Trigger: ACCAAGGTGCACTGAGAAGCAATCAACGGGTCGGTC...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR GCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTACTCTGGACCTGTTGGTaGAATCAAGGTCTTGCTTTC +
Preference number: 2 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLLWTCW*NQGLAF
Trigger: GAAAGCAAGACCTTGATTGCACCAACAGGTCCAGAG...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATTTTAAGACTTGTCTCTaGCTCCTCTATGCTTTGAAG +
Preference number: 2 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHFKTCL*LLYALK
Trigger: CTTCAAAGCATAGAGGAGGCAGAGACAAGTCTTAAA...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTAAGGTTTTCCAACGTCTaGTCAACAGACATCCCTAGC +
Preference number: 2 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLRFSNV*STDIPS
Trigger: GCTAGGGATGTCTGTTGACCAGACGTTGGAAAACCT...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCCTGCAGTTTCAGATATaGAATTCAGGGGCAAGTACA +
Preference number: 2 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFLQFQI*NSGAST
Trigger: TGTACTTGCCCCTGAATTCCATATCTGAAACTGCAG...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 90 bp ATGTCCTTCAGTCATGTAATGTGCAGGACCTGTATTAGCAGAAAATaGGTATGTTGGATGTCCAGCTATGCCAGTCTCTTGGCGGGGATT +
Preference number: 2 (lower is better)
Translates to: MSFSHVMCRTCISRK*VCWMSSYASLLAGI
Trigger: AATCCCCGCCAAGAGACTGGCATAGCTGGACATCCAACATACCAATTTTCTGCTAATACAGGTCCTGCACATTACATGACTGAAGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR TCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAGTGTTAATCTCCTCCTaGTTCAAGCAGCTTTGCACT +
Preference number: 2 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGVLISS*FKQLCT
Trigger: AGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACAC...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR TCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGACAGATAGGAGAGTTCTaGTCCCCGCCACTCAGCATG +
Preference number: 2 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRQIGEF*SPPLSM
Trigger: CATGCTGAGTGGCGGGGATCAGAACTCTCCTATCTG...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTAAAACACACCAAGCGATaGGCCACTTACCTCAATGAA +
Preference number: 2 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLKHTKR*ATYLNE
Trigger: TTCATTGAGGTAAGTGGCTCATCGCTTGGTGTGTTT...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGAAGTACTGCATTTCCGTaGCCAAGTGTGTTTAGAGGA +
Preference number: 2 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRSTAFP*PSVFRG
Trigger: TCCTCTAAACACACTTGGGCACGGAAATGCAGTACT...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR GCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAAGTACTGCATTTCCGTaGCCAAGTGTGTTTAGAGGA +
Preference number: 2 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGSTAFP*PSVFRG
Trigger: TCCTCTAAACACACTTGGGCACGGAAATGCAGTACT...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR GCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTCACCTTGTGTCAAAGTaGAGAACTGCTACATTATTG +
Preference number: 2 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSHLVSK*RTATLL
Trigger: CAATAATGTAGCAGTTCTGCACTTTGACACAAGGTG...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTTCTGAACCTGCATTCTaGGACTATCAAAATAAAGGC +
Preference number: 2 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSSEPAF*DYQNKG
Trigger: GCCTTTATTTTGATAGTCGCAGAATGCAGGTTCAGA...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACAAAACAAGCATCCAGTaGCTTCAACACAGGCATACG +
Preference number: 2 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDKTSIQ*LQHRHT
Trigger: CGTATGCCTGTGTTGAAGGCACTGGATGCTTGTTTT...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTTCATTAACAACTCCCTaGCCGGCACACCTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: EVILVSQLNETIVGEKPVSLTTP*PAHLLG
Trigger: GCCAAGCAGGTGTGCCGGGCAGGGAGTTGTTAATGA...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTTTGGGAAATAACATGTaGCATTCTCATGGGACATCT +
Preference number: 2 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSLGNNM*HSHGTS
Trigger: AGATGTCCCATGAGAATGGCACATGTTATTTCCCAA...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTCATCCTATCTTCCTGTaGCCTCTGCAACGGGAGAGC +
Preference number: 2 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSHPIFL*PLQRES
Trigger: GCTCTCCCGTTGCAGAGGCCACAGGAAGATAGGATG...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR CCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGCTTCTCAGTGCACCTTaGTTAGGAGACCAGTCACGT +
Preference number: 2 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKLLSAP*LGDQSR
Trigger: ACGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAG...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR CCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATACCAAGTCATGTATTTaGAATGAACCATCTGGTCTA +
Preference number: 2 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHTKSCI*NEPSGL
Trigger: TAGACCAGATGGTTCATTCCAAATACATGACTTGGT...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTAAATTAGTTGGCAAATaGCCAAGACCAACATCTGAA +
Preference number: 2 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSKLVGK*PRPTSE
Trigger: TTCAGATGTTGGTCTTGGTCATTTGCCAACTAATTT...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACAAAATCCTGCTAGTGTaGTGGTCATCCGTGGTTTTA +
Preference number: 2 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDKILLV*WSSVVL
Trigger: TAAAACCACGGATGACCATCACACTAGCAGGATTTT...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGGACCGACCCGTTGATTaGTTCTCAGTGCACCTTGGT +
Preference number: 2 (lower is better)
Translates to: KACPKVIASEMVGSSNFEDRPVD*FSVHLG
Trigger: ACCAAGGTGCACTGAGAAGCAATCAACGGGTCGGTC...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR GCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTGACCGACCCGTTGATTaGTTCTCAGTGCACCTTGGT +
Preference number: 2 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSDRPVD*FSVHLG
Trigger: ACCAAGGTGCACTGAGAAGCAATCAACGGGTCGGTC...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR CCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTTGTAGACCCTTGGCCTaGTCCGGTTACCCAAGGCTT +
Preference number: 2 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTACRPLA*SGYPRL
Trigger: AAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTACA...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR CCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACAGAGGAGCTATTCGTTaGAGAATTGTAGACCCTTGG +
Preference number: 2 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHRGAIR*RIVDPW
Trigger: CCAAGGGTCTACAATTCTCCAACGAATAGCTCCTCT...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR CCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAAGAAAATTGGTATGTTaGATGTCCAGCTATGCCAGT +
Preference number: 2 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTRKLVC*MSSYAS
Trigger: ACTGGCATAGCTGGACATCCAACATACCAATTTTCT...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR CCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCACCAAGTCATGTATTTaGAATGAACCATCTGGTCTA +
Preference number: 2 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFTKSCI*NEPSGL
Trigger: TAGACCAGATGGTTCATTCCAAATACATGACTTGGT...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACAAATCAGCGTCCAGTTaGAGAAACACTTTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDKSASS*RNTLSP
Trigger: AGGAGACAAAGTGTTTCTCCAACTGGACGCTGATTT...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCGTGTTAATCTCCTCCTaGTTCAAGCAGCTTTGCACT +
Preference number: 2 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFVLISS*FKQLCT
Trigger: AGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACAC...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR TCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACTTAGGGAAGGAAGAATaGGTATTCGTATTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDLGKEE*VFVFLP
Trigger: AGGAAGGAATACGAATACTCATTCTTCCTTCCCTAA...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCTTCAGTCATGTAATGTaGAGGACCTGTATTAGCAGA +
Preference number: 2 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSFSHVM*RTCISR
Trigger: TCTGCTAATACAGGTCCTGCACATTACATGACTGAA...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR GCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGTCTTCCTTACAGTACTaGATTTCCGTGCCCAAGTGT +
Preference number: 2 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKSSLQY*ISVPKC
Trigger: ACACTTGGGCACGGAAATGCAGTACTGTAAGGAAGA...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR GCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCGGTGGAGATACCACGTaGCGAGAAAAAGCAAAAGAA +
Preference number: 2 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFGGDTT*REKAKE
Trigger: TTCTTTTGCTTTTTCTCGGCACGTGGTATCTCCACC...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR GCA 90 bp CACTGCAATTTACATTGCACAGAGCGGCAGGGCAAAATGATGAGAATGCCACATAGCCCAATATCCATGTaGCTAGGTAAAATTCTCACA +
Preference number: 2 (lower is better)
Translates to: HCNLHCTERQGKMMRMPHSPISM*LGKILT
Trigger: TGTGAGAATTTTACCTAGGCACATGGATATTGGGCT...ATGTGGCATTCTCATCATTTTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTAAGGCTGCAGTGAGCTaGAATCACACCACCAAACTC +
Preference number: 2 (lower is better)
Translates to: EVILVSQLNETIVGEKPVKAAVS*NHTTKL
Trigger: GAGTTTGGTGGTGTGATTGCAGCTCACTGCAGCCTT...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp CACTGCAATTTACATTGCACAGAGCGGCAGGGCAAAATGATGAGAATGCCACATTTGGGAAATAACATGTaGCATTCTCATGGGACATCT +
Preference number: 2 (lower is better)
Translates to: HCNLHCTERQGKMMRMPHLGNNM*HSHGTS
Trigger: AGATGTCCCATGAGAATGGCACATGTTATTTCCCAA...ATGTGGCATTCTCATCATTTTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTTACCTCACTGAGGCATaGACAGCATCTCCTAAGTGG +
Preference number: 2 (lower is better)
Translates to: EVILVSQLNETIVGEKPVYLTEA*TASPKW
Trigger: CCACTTAGGAGATGCTGTGCATGCCTCAGTGAGGTA...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGGGTGTTTGTGGAAGCTaGAGGTCCCTCTTCCTTACA +
Preference number: 2 (lower is better)
Translates to: KACPKVIASEMVGSSNFEGVCGS*RSLFLT
Trigger: TGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACC...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR CCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATCATCCTATCTTCCTGTaGCCTCTGCAACGGGAGAGC +
Preference number: 2 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNHPIFL*PLQRES
Trigger: GCTCTCCCGTTGCAGAGGCCACAGGAAGATAGGATG...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCCTTGCACTCATACTCTaGACCTGTTGGTGCAATCAA +
Preference number: 2 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFLALIL*TCWCNQ
Trigger: TTGATTGCACCAACAGGTCCAGAGTATGAGTGCAAG...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR CCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGACAACACCACAAAAGCTaGGAAGCAGTACAGGGGCAA +
Preference number: 2 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRQHHKS*EAVQGQ
Trigger: TTGCCCCTGTACTGCTTCCCAGCTTTTGTGGTGTTG...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTAAGACCTGGAGCTGCTaGGAAGCACAAAAGCTCATC +
Preference number: 2 (lower is better)
Translates to: EVILVSQLNETIVGEKPVKTWSC*EAQKLI
Trigger: GATGAGCTTTTGTGCTTCCCAGCAGCTCCAGGTCTT...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 90 bp ACTGGCCTAGAACTGAGTGCCTGCTATCTCGTCTTCGTGTGTATTTaGATTATGTATCTCCCTATTGGAAGAACAGAAAAGTTCAACACC +
Preference number: 2 (lower is better)
Translates to: TGLELSACYLVFVCI*IMYLPIGRTEKFNT
Trigger: GGTGTTGAACTTTTCTGTTCTTCCAATAGGGAGATACATAATCAAAATACACACGAAGACGAGATAGCAGGCACTCAGTTCTAGGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACTTTAAGAAATCTGAATaGAGTCTGGGTATACCGAAG +
Preference number: 2 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDFKKSE*SLGIPK
Trigger: CTTCGGTATACCCAGACTTCATTCAGATTTCTTAAA...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCATGTTTAAGGCTGCAGTaGGCTGCAATCACACCACCA +
Preference number: 2 (lower is better)
Translates to: RTRLVCDVHKNALSHAISCLRLQ*AAITPP
Trigger: TGGTGGTGTGATTGCAGCTCACTGCAGCCTTAAACA...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTTGTCCACTTATAAACTaGTGCTGGCAAGCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: EVILVSQLNETIVGEKPVCPLIN*CWQASS
Trigger: TGAGGAGGCTTGCCAGCATCAGTTTATAAGTGGACA...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp CACTGCAATTTACATTGCACAGAGCGGCAGGGCAAAATGATGAGAATGCCACATCACATCCAGTCGAAATaGTACCAACTAAAATATGAG +
Preference number: 2 (lower is better)
Translates to: HCNLHCTERQGKMMRMPHHIQSK*YQLKYE
Trigger: CTCATATTTTAGTTGGTAGCATTTCGACTGGATGTG...ATGTGGCATTCTCATCATTTTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCATGGCCTAGAACTGAGTaGCTGCTATCTCGTCTTCGT +
Preference number: 2 (lower is better)
Translates to: RTRLVCDVHKNALSHAISWPRTE*LLSRLR
Trigger: ACGAAGACGAGATAGCAGGCACTCAGTTCTAGGCCA...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAGTGCAGAAGAAATGGTaGAGATACCACGTGCCGAGA +
Preference number: 2 (lower is better)
Translates to: RTRLVCDVHKNALSHAISVQKKW*RYHVPR
Trigger: TCTCGGCACGTGGTATCTCCACCATTTCTTCTGCAC...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 90 bp AACAGACCCTTACCACAGTTATTCCTCCAGGCAGTCTCCCTGAGGTaGTACAGAGAAATTCTACTGAAAACCCATCCTTATAAAACATTT +
Preference number: 2 (lower is better)
Translates to: NRPLPQLFLQAVSLR*YREILLKTHPYKTF
Trigger: AAATGTTTTATAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGGAGGAATAACTGTGGTAAGGGTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTGAAGGTCTTGGTATGTaGTCTCGAAAGTCAAGGTCA +
Preference number: 2 (lower is better)
Translates to: EVILVSQLNETIVGEKPVEGLGM*SRKSRS
Trigger: TGACCTTGACTTTCGAGATCACATACCAAGACCTTC...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCATGGGGCCCTTTATaGAAATTATGTGCAGTGCCT +
Preference number: 2 (lower is better)
Translates to: KACPKVIASEMVGSSNFESWGPL*KLCAVP
Trigger: AGGCACTGCACATAATTTGCATAAAGGGCCCCATGA...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR GCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTTCAGCATGCTTACTGTaGCTGACAAACTTCACCACA +
Preference number: 2 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSSACLL*LTNFTT
Trigger: TGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGA...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR GCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTTGATTGCTTCTCAGTaGACCTTGGTTAGGAGACCA +
Preference number: 2 (lower is better)
Translates to: KACPKVIASEMVGSSNFELIASQ*TLVRRP
Trigger: TGGTCTCCTAACCAAGGTGCACTGAGAAGCAATCAA...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR GCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGATTGATTGCTTCTCAGTaGACCTTGGTTAGGAGACCA +
Preference number: 2 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRLIASQ*TLVRRP
Trigger: TGGTCTCCTAACCAAGGTGCACTGAGAAGCAATCAA...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCGCATTAAGGACTGTCTaGAAAAGCATGTCCAAAAGT +
Preference number: 2 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFALRTV*KSMSKS
Trigger: ACTTTTGGACATGCTTTTGCAGACAGTCCTTAATGC...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR CAA 90 bp AGAAATCTGAATGAAGTCTGGGTATACCGAAGTCACGCACGGCTTTaGTCCCCATTACATTTTCAAACTTCCTTCATATATAGCAGTAAG +
Preference number: 2 (lower is better)
Translates to: RNLNEVWVYRSHARL*SPLHFQTSFIYSSK
Trigger: CTTACTGCTATATATGAAGGAAGTTTGAAAATGTAATGGGGACAAAAGCCGTGCGTGACTTCGGTATACCCAGACTTCATTCAGATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTAAAAGAGGATACCTCTaGGCTATCCATGAAGATGGG +
Preference number: 2 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAKRGYL*AIHEDG
Trigger: CCCATCTTCATGGATAGCTCAGAGGTATCCTCTTTT...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR GCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCATCATGGGGCCCTTTATaGAAATTATGTGCAGTGCCT +
Preference number: 2 (lower is better)
Translates to: RTRLVCDVHKNALSHAISSWGPL*KLCAVP
Trigger: AGGCACTGCACATAATTTGCATAAAGGGCCCCATGA...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTTCAGCATGCTTACTGTaGCTGACAAACTTCACCACA +
Preference number: 2 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTASACLL*LTNFTT
Trigger: TGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGA...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR GCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATCTCTGGACCTGTTGGTaGAATCAAGGTCTTGCTTTC +
Preference number: 2 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNLWTCW*NQGLAF
Trigger: GAAAGCAAGACCTTGATTGCACCAACAGGTCCAGAG...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCACTTGTATTCTGTCTATaGGGATACCACCCAGAATGC +
Preference number: 2 (lower is better)
Translates to: RTRLVCDVHKNALSHAISLVFCL*GYHPEC
Trigger: GCATTCTGGGTGGTATCCCCATAGACAGAATACAAG...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATATACTCTGGACCTGTTaGTGCAATCAAGGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNILWTC*CNQGLA
Trigger: AGCAAGACCTTGATTGCACCAACAGGTCCAGAGTAT...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTAAATTAGTTGGCAAATaGCCAAGACCAACATCTGAA +
Preference number: 2 (lower is better)
Translates to: EVILVSQLNETIVGEKPVKLVGK*PRPTSE
Trigger: TTCAGATGTTGGTCTTGGTCATTTGCCAACTAATTT...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTCATTTAACTCAACTTTaGTACTATACCTACCAGACC +
Preference number: 2 (lower is better)
Translates to: EVILVSQLNETIVGEKPVHLTQL*YYTYQT
Trigger: GGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATG...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTTTTAAGAAATCTGAATaGAGTCTGGGTATACCGAAG +
Preference number: 2 (lower is better)
Translates to: EVILVSQLNETIVGEKPVFKKSE*SLGIPK
Trigger: CTTCGGTATACCCAGACTTCATTCAGATTTCTTAAA...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAAAGAAACCAGGGTTATaGAAATCAGAACTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: RTRLVCDVHKNALSHAISKKPGL*KSELLL
Trigger: GAGGAGAAGTTCTGATTTTCATAACCCTGGTTTCTT...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATATGAGAGTTCTGCTTTaGTTGCACTCATACTCTGGA +
Preference number: 2 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNMRVLL*LHSYSG
Trigger: TCCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCAT...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAAGCCCAATATCCATGTaGCTAGGTAAAATTCTCACA +
Preference number: 2 (lower is better)
Translates to: RTRLVCDVHKNALSHAISSPISM*LGKILT
Trigger: TGTGAGAATTTTACCTAGGCACATGGATATTGGGCT...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAGAACTGCTACATTATTaGTTACAGACATCTATGTGC +
Preference number: 2 (lower is better)
Translates to: RTRLVCDVHKNALSHAISELLHY*LQTSMC
Trigger: GCACATAGATGTCTGTAACCAATAATGTAGCAGTTC...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTTTCCTTTCTTACATGTaGTTAACTTCAACTTTACGC +
Preference number: 2 (lower is better)
Translates to: EVILVSQLNETIVGEKPVFLSYM*LTSTLR
Trigger: GCGTAAAGTTGAAGTTAACCACATGTAAGAAAGGAA...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR TCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATTTTCTAGGCTTCTTTTaGTCCTGGACAGGTAAATTA +
Preference number: 2 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNFLGFF*SWTGKL
Trigger: TAATTTACCTGTCCAGGATCAAAAGAAGCCTAGAAA...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR GCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATGTCAAAGTGCAGAACTaGTACATTATTGGTTACAGA +
Preference number: 2 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNVKVQN*YIIGYR
Trigger: TCTGTAACCAATAATGTAGCAGTTCTGCACTTTGAC...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp GCCCCTGCTGGGAGGACCCATCGTGCCAAAGGCCTCTaGGCGCAGAGCTGCCCAGACTGGCCAGGGACAAGA +
Preference number: 3 (lower is better)
Translates to: APAGRTHRAKGL*AQSCPDWPGTR
Trigger: TCTTGTCCCTGGCCAGTCTGGGCAGCTCTGCGCTCAGAGGCCTTTGGCACGATGGGTCCTCCCAGCAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp GGAGCGTCACCCAGCAGTGTCCCAGCACCCTGGAGCTaGTGCTGCTGCAGACAGCCTGAACCAGCAGTGGGG +
Preference number: 3 (lower is better)
Translates to: GASPSSVPAPWS*CCCRQPEPAVG
Trigger: CCCCACTGCTGGTTCAGGCTGTCTGCAGCAGCAGCAGCTCCAGGGTGCTGGGACACTGCTGGGTGACGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 72 bp GCTGGCCACACTCAGGCTCAGGCCCGTCCTCTTGCCTaGGTGTTCATTAACAACTCCCTGCCCGGCACACCT +
Preference number: 3 (lower is better)
Translates to: AGHTQAQARPLA*VFINNSLPGTP
Trigger: AGGTGTGCCGGGCAGGGAGTTGTTAATGAACACCCAGGCAAGAGGACGGGCCTGAGCCTGAGTGTGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp CCTGGATTTGCGGGCAATGGAAGTGGGAGTGGTGCCTaGAGTGAGCTCCTCCCCACCTCGTGGCATCACCTC +
Preference number: 3 (lower is better)
Translates to: PGFAGNGSGSGA*SELLPTSWHHL
Trigger: GAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTCCATTGCCCGCAAATCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp CTCAGACCTCCCCAGGACTGGCCACGACCGACCCGTTaGTTGCTTCTCAGTGCACCTTGGTTAGGAGACCAG +
Preference number: 3 (lower is better)
Translates to: LRPPQDWPRPTR*LLLSAPWLGDQ
Trigger: CTGGTCTCCTAACCAAGGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGGCCAGTCCTGGGGAGGTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR CAA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTCTCAGGCCCGTCCTCTaGCCTGGGTGTTCATTAACA +
Preference number: 3 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSLRPVL*PGCSLT
Trigger: TGTTAATGAACACCCAGGCAAGAGGACGGGCCTGAG...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp ATTTGCGGGCAATGGAAGTGGGAGTGGTGCCTGAAGTaGGCTCCTCCCCACCTCGTGGCATCACCTCTTCAG +
Preference number: 3 (lower is better)
Translates to: ICGQWKWEWCLK*APPHLVASPLQ
Trigger: CTGAAGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTCCATTGCCCGCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 72 bp ATGCCAGCATCGCCCGGCCTCCCATGCGAACAGAGCTaGGCTCCACTTGTCTTGTCCACTTGTTTCCTCTGT +
Preference number: 3 (lower is better)
Translates to: MPASPGLPCEQS*APLVLSTCFLC
Trigger: ACAGAGGAAACAAGTGGACAAGACAAGTGGAGCCCAGCTCTGTTCGCATGGGAGGCCGGGCGATGCTGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp GCAAGCACCCAGGTGATGCTAATGTCGTCAGCCCACTaGCTACACTGGGCAGCAAGGGGCTGGACAATCTTC +
Preference number: 3 (lower is better)
Translates to: ASTQVMLMSSAH*LHWAARGWTIF
Trigger: GAAGATTGTCCAGCCCCTTGCTGCCCAGTGTAGTCAGTGGGCTGACGACATTAGCATCACCTGGGTGCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp GGACTGGCCACGACCGACCCGTTGATTGCTTCTCAGTaGACCTTGGTTAGGAGACCAGTCACGTTCCATCCT +
Preference number: 3 (lower is better)
Translates to: GLATTDPLIASQ*TLVRRPVTFHP
Trigger: AGGATGGAACGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGGCCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR GCA 72 bp TCATTAACAACTCCCTGCCCGGCACACCTGCTTGGCTaGTTCCTGGCCACCCTAGTGCAGAACTACCACACA +
Preference number: 3 (lower is better)
Translates to: SLTTPCPAHLLG*FLATLVQNYHT
Trigger: TGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAGCAGCCAAGCAGGTGTGCCGGGCAGGGAGTTGTTAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp CCTCCCAGGGTCTCTTTTAAGCAACTCAACACTTTCTaGTGGCCACACTCAGGCTCAGGCCCGTCCTCTTGC +
Preference number: 3 (lower is better)
Translates to: PPRVSFKQLNTF*WPHSGSGPSSC
Trigger: GCAAGAGGACGGGCCTGAGCCTGAGTGTGGCCAGCAGAAAGTGTTGAGTTGCTTAAAAGAGACCCTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 72 bp CCCAGGGTCTCTTTTAAGCAACTCAACACTTTCTGCTaGCCACACTCAGGCTCAGGCCCGTCCTCTTGCCTG +
Preference number: 3 (lower is better)
Translates to: PRVSFKQLNTFC*PHSGSGPSSCL
Trigger: CAGGCAAGAGGACGGGCCTGAGCCTGAGTGTGGCCAGCAGAAAGTGTTGAGTTGCTTAAAAGAGACCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp CGAGAATCGCTTGAATCTGGGAAATGGAGGTTGCAGTaGGCCGAGATCACACCCCTGCACACCAACCTGGGA +
Preference number: 3 (lower is better)
Translates to: RESLESGKWRLQ*AEITPLHTNLG
Trigger: TCCCAGGTTGGTGTGCAGGGGTGTGATCTCGGCTCACTGCAACCTCCATTTCCCAGATTCAAGCGATTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp GTGGGAGCAAAGGGTGGGGACTGGCCCCTGGATGCGTaGTCACAAGGGTCTAATGACCATGCCTGTTCAAAA +
Preference number: 3 (lower is better)
Translates to: VGAKGGDWPLDA*SQGSNDHACSK
Trigger: TTTTGAACAGGCATGGTCATTAGACCCTTGTGATCACGCATCCAGGGGCCAGTCCCCACCCTTTGCTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp AGGCACGAGAATCGCTTGAATCTGGGAAATGGAGGTTaGAGTGAGCCGAGATCACACCCCTGCACACCAACC +
Preference number: 3 (lower is better)
Translates to: RHENRLNLGNGG*SEPRSHPCTPT
Trigger: GGTTGGTGTGCAGGGGTGTGATCTCGGCTCACTGCAACCTCCATTTCCCAGATTCAAGCGATTCTCGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp CTGCAATGGGCAGGAAACAGAAGCCAAAGTCGTCCCTaGTCTTCCAGAGCTCTCCTGTTCCTGAACAGCCGA +
Preference number: 3 (lower is better)
Translates to: LQWAGNRSQSRP*SSRALLFLNSR
Trigger: TCGGCTGTTCAGGAACAGGAGAGCTCTGGAAGAGCAGGGACGACTTTGGCTTCTGTTTCCTGCCCATTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 72 bp GTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTaGCCTCTGCAACGGGAGAGCCACAGGATCCCATGT +
Preference number: 3 (lower is better)
Translates to: VRRPVTFHPIFL*PLQRESHRIPC
Trigger: ACATGGGATCCTGTGGCTCTCCCGTTGCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR CCA 72 bp TTCTTGCCAGAGTCCTGCCTGGCTGCAGGTTCAGAATaGCCCGCAAAGTTTCAGAAAACAGAGCTCCAGGCC +
Preference number: 3 (lower is better)
Translates to: FLPESCLAAGSE*PAKFQKTELQA
Trigger: GGCCTGGAGCTCTGTTTTCTGAAACTTTGCGGGCCATTCTGAACCTGCAGCCAGGCAGGACTCTGGCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 72 bp GAAAGAGGTAGCCCGTCTCTCCAGCACCCACATTCCTaGGCGAGGGTGACACTCCAGTCAGAAGGTAAGAAT +
Preference number: 3 (lower is better)
Translates to: ERGSPSLQHPHS*ARVTLQSEGKN
Trigger: ATTCTTACCTTCTGACTGGAGTGTCACCCTCGCCCAGGAATGTGGGTGCTGGAGAGACGGGCTACCTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp GTCATATTAGCCACACGCCTCTTCTTGCCAGAGTCCTaGCTGGCTGCAGGTTCAGAATGGCCCGCAAAGTTT +
Preference number: 3 (lower is better)
Translates to: VILATRLFLPES*LAAGSEWPAKF
Trigger: AAACTTTGCGGGCCATTCTGAACCTGCAGCCAGGCAGGACTCTGGCAAGAAGAGGCGTGTGGCTAATATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTTCCATGAAGATGGGTTaGGACATGGCTCTTTTAAAC +
Preference number: 3 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSSMKMG*DMALLN
Trigger: GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGA...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp GTTCTGATCCCCGCCACTCAGCATGCTTACTGTGCCTaGCAAACTTCACCACAACCGTCCCTTTCATACAGC +
Preference number: 3 (lower is better)
Translates to: VLIPATQHAYCA*QTSPQPSLSYS
Trigger: GCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTGGCGGGGATCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR TCA 72 bp CAACACAGGCATACGTCAAAAATTCCTGGTCCAGGGTaGAAGCCCAGTAGGCATCCACAGGCTGGTTCTCAG +
Preference number: 3 (lower is better)
Translates to: QHRHTSKIPGPG*KPSRHPQAGSQ
Trigger: CTGAGAACCAGCCTGTGGATGCCTACTGGGCTTTCACCCTGGACCAGGAATTTTTGACGTATGCCTGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp GCCTGTCTGCTCAGGTCACGCATGAGAGTTCTGCTTTaGTTGCACTCATACTCTGGACCTGTTGGTGCAATC +
Preference number: 3 (lower is better)
Translates to: ACLLRSRMRVLL*LHSYSGPVGAI
Trigger: GATTGCACCAACAGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCATGCGTGACCTGAGCAGACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR CCA 72 bp AGGAGCTATTCGTTGGAGAATTGTAGACCCTTGGCCTaGTCCGGTTACCCAAGGCTTGTTGTCCATGGTGGT +
Preference number: 3 (lower is better)
Translates to: RSYSLENCRPLA*SGYPRLVVHGG
Trigger: ACCACCATGGACAACAAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTACAATTCTCCAACGAATAGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR CCA 72 bp GGTAGAGGAGCTATTCGTTGGAGAATTGTAGACCCTTaGCCTGGTCCGGTTACCCAAGGCTTGTTGTCCATG +
Preference number: 3 (lower is better)
Translates to: GRGAIRWRIVDP*PGPVTQGLLSM
Trigger: CATGGACAACAAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTACAATTCTCCAACGAATAGCTCCTCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR CCA 72 bp ACTGTAACTACTATACAGAGCTGGTGGCTGGTGCCCTaGGAAACCCTTCACCGGCTTACAAGACCAGATGAG +
Preference number: 3 (lower is better)
Translates to: TVTTIQSWWLVP*ETLHRLTRPDE
Trigger: CTCATCTGGTCTTGTAAGCCGGTGAAGGGTTTCCCAGGGCACCAGCCACCAGCTCTGTATAGTAGTTACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 72 bp CTAGAGAGGGAAACTGTAACTACTATACAGAGCTGGTaGCTGGTGCCCTGGGAAACCCTTCACCGGCTTACA +
Preference number: 3 (lower is better)
Translates to: LERETVTTIQSW*LVPWETLHRLT
Trigger: TGTAAGCCGGTGAAGGGTTTCCCAGGGCACCAGCCACCAGCTCTGTATAGTAGTTACAGTTTCCCTCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 72 bp TCGCCATCAGTTGCCTATATGAGAATGACCAGAAATTaGCCATTCCCAGGCCCGACTTTCCCCTCCTCCATC +
Preference number: 3 (lower is better)
Translates to: SPSVAYMRMTRN*PFPGPTFPSSI
Trigger: GATGGAGGAGGGGAAAGTCGGGCCTGGGAATGGCCAATTTCTGGTCATTCTCATATAGGCAACTGATGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp CACTGCAATTTACATTGCACAGAGCGGCAGGGCAAAATGATGAGAATGCCACATGCCACGACCGACCCGTaGATTGCTTCTCAGTGCACC +
Preference number: 3 (lower is better)
Translates to: HCNLHCTERQGKMMRMPHATTDP*IASQCT
Trigger: GGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGGC...ATGTGGCATTCTCATCATTTTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGACCGGTTACCCAAGGCTaGTTGTCCATGGTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRPVTQG*LSMVVV
Trigger: CACCACCACCATGGACAACAAGCCTTGGGTAACCGG...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR CAA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATAAGCTATGCCAGTCTCTaGGCGGGGATTGGAGTAGAC +
Preference number: 3 (lower is better)
Translates to: HSACLLCLTNFTTTVPFISYASL*AGIGVD
Trigger: GTCTACTCCAATCCCCGCCAAGAGACTGGCATAGCT...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR CAA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTAGAACTGCTACATTATaGGTTACAGACATCTATGTG +
Preference number: 3 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSRTATL*VTDIYV
Trigger: CACATAGATGTCTGTAACCAATAATGTAGCAGTTCT...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATCATACTCTGGACCTGTaGGTGCAATCAAGGTCTTGC +
Preference number: 3 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHHTLDL*VQSRSC
Trigger: GCAAGACCTTGATTGCACCAACAGGTCCAGAGTATG...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp AGTTTCAACAGTGACCTGTGTAGGAGCTTCAGTGCCTaGCCAACCAAGAGGAGCAGGAAATTGCTGACGCAC +
Preference number: 3 (lower is better)
Translates to: SFNSDLCRSFSA*PTKRSRKLLTH
Trigger: GTGCGTCAGCAATTTCCTGCTCCTCTTGGTTGGTCAGGCACTGAAGCTCCTACACAGGTCACTGTTGAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR TCA 72 bp AAAGTCAAGGTCAGCGTGGAGAACTGGAAAGAGGCCTaGCTAGAAGACAGACTGTCGCTGGTCAGTTGTGTC +
Preference number: 3 (lower is better)
Translates to: KVKVSVENWKEA*LEDRLSLVSCV
Trigger: GACACAACTGACCAGCGACAGTCTGTCTTCTAGTCAGGCCTCTTTCCAGTTCTCCACGCTGACCTTGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp AGCTACAGGGACCATCCAGCTGAAGGTCTTGGTATGTaGTCTCGAAAGTCAAGGTCAGCGTGGAGAACTGGA +
Preference number: 3 (lower is better)
Translates to: SYRDHPAEGLGM*SRKSRSAWRTG
Trigger: TCCAGTTCTCCACGCTGACCTTGACTTTCGAGATCACATACCAAGACCTTCAGCTGGATGGTCCCTGTAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp CTGCACACACTCTCTTGCTTGCCGCCACCTAAGACTTaGCTTGGCTTCTCCTTTACCTTCCACAACGATTGT +
Preference number: 3 (lower is better)
Translates to: LHTLSCLPPPKT*LGFSFTFHNDC
Trigger: ACAATCGTTGTGGAAGGTAAAGGAGAAGCCAAGGCAAGTCTTAGGTGGCGGCAAGCAAGAGAGTGTGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp TATAAAGGGCAGTTCCCCTGCACACACTCTCTTGCTTaGCGCCACCTAAGACTTGCCTTGGCTTCTCCTTTA +
Preference number: 3 (lower is better)
Translates to: YKGQFPCTHSLA*RHLRLALASPL
Trigger: TAAAGGAGAAGCCAAGGCAAGTCTTAGGTGGCGGCAAGCAAGAGAGTGTGTGCAGGGGAACTGCCCTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 72 bp TCCATTCTGTCCAAAGTCCAAGGTATTAGCAGCCACTaGGCGATTCTGGTAGGCCTGATTGCCTTGGTTACC +
Preference number: 3 (lower is better)
Translates to: SILSKVQGISSH*AILVGLIALVT
Trigger: GGTAACCAAGGCAATCAGGCCTACCAGAATCGCCCAGTGGCTGCTAATACCTTGGACTTTGGACAGAATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR CCA 72 bp ATTCTAGAGAGGGAAACTGTAACTACTATACAGAGCTaGTGGCTGGTGCCCTGGGAAACCCTTCACCGGCTT +
Preference number: 3 (lower is better)
Translates to: ILERETVTTIQS*WLVPWETLHRL
Trigger: AAGCCGGTGAAGGGTTTCCCAGGGCACCAGCCACCAGCTCTGTATAGTAGTTACAGTTTCCCTCTCTAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 72 bp CATTTACAACCCTACTTCCACCTTTGTTCAGGGTCCTaGAGAGCCTCCCAGCTTCTTTTAATCCCGGGGCAT +
Preference number: 3 (lower is better)
Translates to: HLQPYFHLCSGS*RASQLLLIPGH
Trigger: ATGCCCCGGGATTAAAAGAAGCTGGGAGGCTCTCCAGGACCCTGAACAAAGGTGGAAGTAGGGTTGTAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAGAGAATTGTAGACCCTaGGCCTGGTCCGGTTACCCA +
Preference number: 3 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGENCRP*AWSGYP
Trigger: TGGGTAACCGGACCAGGCCAAGGGTCTACAATTCTC...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR CAA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCGCCACGACCGACCCGTaGATTGCTTCTCAGTGCACC +
Preference number: 3 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFATTDP*IASQCT
Trigger: GGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGGC...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR CAA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTGGTGCAATCAAGGTCTaGCTTTCAAGTTTACAAGTA +
Preference number: 3 (lower is better)
Translates to: LPGHPSAELPHTPSACHFGAIKV*LSSLQV
Trigger: TACTTGTAAACTTGAAAGCAAGACCTTGATTGCACC...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp CACTGCAATTTACATTGCACAGAGCGGCAGGGCAAAATGATGAGAATGCCACATCTCAGGCCCGTCCTCTaGCCTGGGTGTTCATTAACA +
Preference number: 3 (lower is better)
Translates to: HCNLHCTERQGKMMRMPHLRPVL*PGCSLT
Trigger: TGTTAATGAACACCCAGGCAAGAGGACGGGCCTGAG...ATGTGGCATTCTCATCATTTTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp CCCAGAATGCACCGGATCGCATCTGAACCTGCATTCTaGGACTATCAAAATAAAGGCAGGCCCAAAGGAAAC +
Preference number: 3 (lower is better)
Translates to: PRMHRIASEPAF*DYQNKGRPKGN
Trigger: GTTTCCTTTGGGCCTGCCTTTATTTTGATAGTCGCAGAATGCAGGTTCAGATGCGATCCGGTGCATTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp TCTCATCATACGGTCTCTGCAGCAACTACTCAATTCTaGCACAGTAGCACCAAAGTGGCCGTGGACAACTTG +
Preference number: 3 (lower is better)
Translates to: SHHTVSAATTQF*HSSTKVAVDNL
Trigger: CAAGTTGTCCACGGCCACTTTGGTGCTACTGTGGCAGAATTGAGTAGTTGCTGCAGAGACCGTATGATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 72 bp AACCTCCATAGAATCTTGGGTAGAGGAGCTATTCGTTaGAGAATTGTAGACCCTTGGCCTGGTCCGGTTACC +
Preference number: 3 (lower is better)
Translates to: NLHRILGRGAIR*RIVDPWPGPVT
Trigger: GGTAACCGGACCAGGCCAAGGGTCTACAATTCTCCAACGAATAGCTCCTCTACCCAAGATTCTATGGAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR CCA 72 bp TTGTTCAAATGCAGATTCTCATCCAGTGGTCTGGGCTaGGGCCTGAGATTTTGCATTGCTAGCAAGCACCCA +
Preference number: 3 (lower is better)
Translates to: LFKCRFSSSGLG*GLRFCIASKHP
Trigger: TGGGTGCTTGCTAGCAATGCAAAATCTCAGGCCCCAGCCCAGACCACTGGATGAGAATCTGCATTTGAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCAGCCCCTTGCCTCATaGTCAGATGTCCTTCAGTCA +
Preference number: 3 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSQPLAS*SDVLQS
Trigger: TGACTGAAGGACATCTGACAATGAGGCAAGGGGCTG...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR CAA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATAGTCACGCACGGCTTTaGTCCCCATTACATTTTCAA +
Preference number: 3 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHSHARL*SPLHFQ
Trigger: TTGAAAATGTAATGGGGACAAAAGCCGTGCGTGACT...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCCATTTCAAGATGTTCTaGGGGCTGGGTGAAGTAGCT +
Preference number: 3 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFHFKMF*GLGEVA
Trigger: AGCTACTTCACCCAGCCCCAAGAACATCTTGAAATG...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp GATATGGCCCCGTACGAGGAGTTAGGGAAGGAAGAATaGGTATTCGTATTCCTTCCTTCATCCAAGCACGTC +
Preference number: 3 (lower is better)
Translates to: DMAPYEELGKEE*VFVFLPSSKHV
Trigger: GACGTGCTTGGATGAAGGAAGGAATACGAATACTCATTCTTCCTTCCCTAACTCCTCGTACGGGGCCATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp TTCCTAAATAGCTCTCGACTCTGTCCACTTATAAACTaGTGCTGGCAAGCCTCCTCACCTTCGAATGGCCTG +
Preference number: 3 (lower is better)
Translates to: FLNSSRLCPLIN*CWQASSPSNGL
Trigger: CAGGCCATTCGAAGGTGAGGAGGCTTGCCAGCATCAGTTTATAAGTGGACAGAGTCGAGAGCTATTTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp TTTGGTGAGCCATACAAAAACAGGAGGGTACCTTGCTaGTGCCTAATCTGCAATGGGCAGGAAACAGAAGCC +
Preference number: 3 (lower is better)
Translates to: FGEPYKNRRVPC*CLICNGQETEA
Trigger: GGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTCCTGTTTTTGTATGGCTCACCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp CTGGCTCCTCAAATAAAGAGCAATAGCGGAGCAGTGTaGATAACATATGGTGACCCCTGTCATGAGAGTCAG +
Preference number: 3 (lower is better)
Translates to: LAPQIKSNSGAV*ITYGDPCHESQ
Trigger: CTGACTCTCATGACAGGGGTCACCATATGTTATGCACACTGCTCCGCTATTGCTCTTTATTTGAGGAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 72 bp CCCTTTCATACAGCTGAAGATGGTGTTTGTGGAAGCTaGAGGTCCCTCTTCCTTACAGTACTGCATTTCCGT +
Preference number: 3 (lower is better)
Translates to: PFHTAEDGVCGS*RSLFLTVLHFR
Trigger: ACGGAAATGCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTGTATGAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR CCA 72 bp TGTAAGCGCTCTGTGAAGAGCAAACCACCACTCAATTaGAATACAGTAGCAGTCCTGGAGGAATCCAGGACT +
Preference number: 3 (lower is better)
Translates to: CKRSVKSKPPLN*NTVAVLEESRT
Trigger: AGTCCTGGATTCCTCCAGGACTGCTACTGTATTCCAATTGAGTGGTGGTTTGCTCTTCACAGAGCGCTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 72 bp ACCACAATTAGTGAATACGCACGTGGGAGCCCTCCCTaGACAAGCTCCTCATCTGAATTCTTCAAGACTACA +
Preference number: 3 (lower is better)
Translates to: TTISEYARGSPP*TSSSSEFFKTT
Trigger: TGTAGTCTTGAAGAATTCAGATGAGGAGCTTGTCCAGGGAGGGCTCCCACGTGCGTATTCACTAATTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGGCTTCTCAGTGCACCTaGGTTAGGAGACCAGTCACG +
Preference number: 3 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKASQCT*VRRPVT
Trigger: CGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAGC...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR CAA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACATGTAATTGCTGCTTaGCTCCTCAGTAGGTTCAGA +
Preference number: 3 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTHVIAA*LLSRFR
Trigger: TCTGAACCTACTGAGGAGCAAAGCAGCAATTACATG...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR CAA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACAGAGTTCTGCTTTGCTaGCACTCATACTCTGGACCT +
Preference number: 3 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDRVLLC*HSYSGP
Trigger: AGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTCT...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATTCAGCAGAACAAGGCTaGTCTGTGATGTACATAAAA +
Preference number: 3 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHSAEQG*SVMYIK
Trigger: TTTTATGTACATCACAGACAAGCCTTGTTCTGCTGA...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp AGCCAAACACACCAAGCGATGAGCCACTTACCTCAATaGACATGTCTTCCACAAAACAAGCATCCAGTGCCT +
Preference number: 3 (lower is better)
Translates to: SQTHQAMSHLPQ*TCLPQNKHPVP
Trigger: AGGCACTGGATGCTTGTTTTGTGGAAGACATGTTCATTGAGGTAAGTGGCTCATCGCTTGGTGTGTTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp GTGAGCTGCAATCACACCACCAAACTCCAGCTTGCGTaGCAAAGCCAGACACCGTCTCTAAAATTAAAGAAG +
Preference number: 3 (lower is better)
Translates to: VSCNHTTKLQLA*QSQTPSLKLKK
Trigger: CTTCTTTAATTTTAGAGACGGTGTCTGGCTTTGTCACGCAAGCTGGAGTTTGGTGGTGTGATTGCAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp GTTGGGGCAGTGTCTCTGACTTTGAATGTGCATGAATaGCCTGGGGACCTTGTTCAAATGCAGATTCTCATC +
Preference number: 3 (lower is better)
Translates to: VGAVSLTLNVHE*PGDLVQMQILI
Trigger: GATGAGAATCTGCATTTGAACAAGGTCCCCAGGTCATTCATGCACATTCAAAGTCAGAGACACTGCCCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp AGGTGTTGGGGCAGTGTCTCTGACTTTGAATGTGCATaGATGACCTGGGGACCTTGTTCAAATGCAGATTCT +
Preference number: 3 (lower is better)
Translates to: RCWGSVSDFECA*MTWGPCSNADS
Trigger: AGAATCTGCATTTGAACAAGGTCCCCAGGTCATTCATGCACATTCAAAGTCAGAGACACTGCCCCAACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp ATCGGACACTTTCTACATACTAGGCATTGTGCTTTCTaGGGACATTACCTCACTGAGGCATGCACAGCATCT +
Preference number: 3 (lower is better)
Translates to: IGHFLHTRHCAF*GHYLTEACTAS
Trigger: AGATGCTGTGCATGCCTCAGTGAGGTAATGTCCGCAGAAAGCACAATGCCTAGTATGTAGAAAGTGTCCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTATGCCTCCTCTATGCTTaGAAGAAGGATTCACAGGTT +
Preference number: 3 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLCLLYA*KKDSQV
Trigger: AACCTGTGAATCCTTCTTCAAAGCATAGAGGAGGCA...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp CTTGTCTTGTCCACTTGTTTCCTCTGTCCTGCATCATaGACTTTTGCCACCACTTTGCCTGACCCAAACTTA +
Preference number: 3 (lower is better)
Translates to: LVLSTCFLCPAS*TFATTLPDPNL
Trigger: TAAGTTTGGGTCAGGCAAAGTGGTGGCAAAAGTTCATGATGCAGGACAGAGGAAACAAGTGGACAAGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp CTGGAGGTCCCTCTTCCTTACAGTACTGCATTTCCGTaGCCAAGTGTGTTTAGAGGACTTAAAAACCCAAAT +
Preference number: 3 (lower is better)
Translates to: LEVPLPYSTAFP*PSVFRGLKNPN
Trigger: ATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAGTACTGTAAGGAAGAGGGACCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR CCA 72 bp AGGAATACAAGAATCAACTGCTGGTTCCATAGCTTCTaGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAAC +
Preference number: 3 (lower is better)
Translates to: RNTRINCWFHSF*IQCPFTFRSLN
Trigger: GTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCAGCAGTTGATTCTTGTATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR CCA 72 bp GATGGTCAGAACTCTAATACGCAAACAAAACCGAGCTaGGGAGAAAGACCACAATTAGTGAATACGCACGTG +
Preference number: 3 (lower is better)
Translates to: DGQNSNTQTKPS*GERPQLVNTHV
Trigger: CACGTGCGTATTCACTAATTGTGGTCTTTCTCCCCAGCTCGGTTTTGTTTGCGTATTAGAGTTCTGACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGGTTACCCAAGGCTTGTaGTCCATGGTGGTGGTGATG +
Preference number: 3 (lower is better)
Translates to: KACPKVIASEMVGSSNFEVTQGL*SMVVVM
Trigger: CATCACCACCACCATGGACAACAAGCCTTGGGTAAC...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR TCA 72 bp TGCATAATGCCAAAGAGAGCCAAACACACCAAGCGATaGGCCACTTACCTCAATGAACATGTCTTCCACAAA +
Preference number: 3 (lower is better)
Translates to: CIMPKRAKHTKR*ATYLNEHVFHK
Trigger: TTTGTGGAAGACATGTTCATTGAGGTAAGTGGCTCATCGCTTGGTGTGTTTGGCTCTCTTTGGCATTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp ATGGTGATGGGAACTGTTACCATGGTGATGATGCAATaGATTCTGTTGAGGGGCTACATGAAAGGTTGTTTC +
Preference number: 3 (lower is better)
Translates to: MVMGTVTMVMMQ*ILLRGYMKGCF
Trigger: GAAACAACCTTTCATGTAGCCCCTCAACAGAATGCATTGCATCATCACCATGGTAACAGTTCCCATCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR CCA 72 bp AAGCCAATGAGAGGAGCAGTGGGATCTGAACCTCTTTaGGATTCTAGAGAGGGAAACTGTAACTACTATACA +
Preference number: 3 (lower is better)
Translates to: KPMRGAVGSEPL*DSREGNCNYYT
Trigger: TGTATAGTAGTTACAGTTTCCCTCTCTAGAATCCCAAAGAGGTTCAGATCCCACTGCTCCTCTCATTGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGAAGAGGAGCAGGAAATaGCTGACGCACATTTCCTTA +
Preference number: 3 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKKRSRK*LTHISL
Trigger: TAAGGAAATGTGCGTCAGCAATTTCCTGCTCCTCTT...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR TCA 72 bp GCTGTTCTCATAATAGTGAGTAAGTCTCATGAGATCTaGTGGTTTTATAAAGGGCAGTTCCCCTGCACACAC +
Preference number: 3 (lower is better)
Translates to: AVLIIVSKSHEI*WFYKGQFPCTH
Trigger: GTGTGTGCAGGGGAACTGCCCTTTATAAAACCATCAGATCTCATGAGACTTACTCACTATTATGAGAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp GTAAGTTGTCCAACTGAGCCATTTTCTATTCCACACTaGTATGAGTTAGCTGTGTCCCCACCCAAATCTCAT +
Preference number: 3 (lower is better)
Translates to: VSCPTEPFSIPH*YELAVSPPKSH
Trigger: ATGAGATTTGGGTGGGGACACAGCTAACTCATATCAGTGTGGAATAGAAAATGGCTCAGTTGGACAACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp CGGAGAACACTGTCCACCTCATTTCCCTGCATTGTTTaGTGTATTTACGTAGAAAAAGAAGTTCCATTCAGG +
Preference number: 3 (lower is better)
Translates to: RRTLSTSFPCIV*CIYVEKEVPFR
Trigger: CCTGAATGGAACTTCTTTTTCTACGTAAATACAGCAAACAATGCAGGGAAATGAGGTGGACAGTGTTCTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp ATGTTAAGTAGCTGTCATTACATAATCAGTGGGAGATaGCTTCAGAAACATCCGCCTACAGAAAGAGGTAGC +
Preference number: 3 (lower is better)
Translates to: MLSSCHYIISGR*LQKHPPTERGS
Trigger: GCTACCTCTTTCTGTAGGCGGATGTTTCTGAAGGCATCTCCCACTGATTATGTAATGACAGCTACTTAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp GAAGACAGACTGTCGCTGGTCAGTTGTGTCATCTTCTaGAAGTTGCTTAAACCTGTTAAGTTTTCTCACTCT +
Preference number: 3 (lower is better)
Translates to: EDRLSLVSCVIF*KLLKPVKFSHS
Trigger: AGAGTGAGAAAACTTAACAGGTTTAAGCAACTTGCAGAAGATGACACAACTGACCAGCGACAGTCTGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAATGAAAGGTTGTTTCTaGAACAGGATGAGTTTCAAC +
Preference number: 3 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGMKGCF*NRMSFN
Trigger: GTTGAAACTCATCCTGTTCAAGAAACAACCTTTCAT...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR CAA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGTCCATGAAGATGGGTTaGGACATGGCTCTTTTAAAC +
Preference number: 3 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKSMKMG*DMALLN
Trigger: GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGA...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR CAA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGAAGAGTTCTGCTTTGCTaGCACTCATACTCTGGACCT +
Preference number: 3 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRRVLLC*HSYSGP
Trigger: AGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTCT...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTATTTCTTTCCTGGATTaGCGGGCAATGGAAGTGGGA +
Preference number: 3 (lower is better)
Translates to: EVILVSQLNETIVGEKPVISFLD*RAMEVG
Trigger: TCCCACTTCCATTGCCCGCAAATCCAGGAAAGAAAT...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTCTGTCCCAAGACCGTTaGCTGGTAAGACATTCTTCT +
Preference number: 3 (lower is better)
Translates to: EVILVSQLNETIVGEKPVLSQDR*LVRHSS
Trigger: AGAAGAATGTCTTACCAGCAAACGGTCTTGGGACAG...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp AGTTGCTTAAACCTGTTAAGTTTTCTCACTCTAAAGTaGGGTGTTGGGGCAGTGTCTCTGACTTTGAATGTG +
Preference number: 3 (lower is better)
Translates to: SCLNLLSFLTLK*GVGAVSLTLNV
Trigger: CACATTCAAAGTCAGAGACACTGCCCCAACACCTCACTTTAGAGTGAGAAAACTTAACAGGTTTAAGCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp AGTCGACTACTGATGTCATTCCTAATGTCAACTCTTTaGGCAACTGTTGTCGTGGAAAGGCCAATAAACAAG +
Preference number: 3 (lower is better)
Translates to: SRLLMSFLMSTL*ATVVVERPINK
Trigger: CTTGTTTATTGGCCTTTCCACGACAACAGTTGCTCAAAGAGTTGACATTAGGAATGACATCAGTAGTCGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp TTGCCTCATTGTCAGATGTCCTTCAGTCATGTAATGTaGAGGACCTGTATTAGCAGAAAATTGGTATGTTGG +
Preference number: 3 (lower is better)
Translates to: LPHCQMSFSHVM*RTCISRKLVCW
Trigger: CCAACATACCAATTTTCTGCTAATACAGGTCCTGCACATTACATGACTGAAGGACATCTGACAATGAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR-3UTR CAA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCATCCATGAAGATGGGTTaGGACATGGCTCTTTTAAAC +
Preference number: 3 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSSMKMG*DMALLN
Trigger: GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGA...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR CAA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGACATGTAATTGCTGCTTaGCTCCTCAGTAGGTTCAGA +
Preference number: 3 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRHVIAA*LLSRFR
Trigger: TCTGAACCTACTGAGGAGCAAAGCAGCAATTACATG...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTCATGTAATTGCTGCTTaGCTCCTCAGTAGGTTCAGA +
Preference number: 3 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSHVIAA*LLSRFR
Trigger: TCTGAACCTACTGAGGAGCAAAGCAGCAATTACATG...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR CAA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTCCAAAATCTGGGACCTaGGCTATGCATAATGCCAAA +
Preference number: 3 (lower is better)
Translates to: EVILVSQLNETIVGEKPVPKSGT*AMHNAK
Trigger: TTTGGCATTATGCATAGCCAAGGTCCCAGATTTTGG...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTATCCAGCTGAAGGTCTaGGTATGTGATCTCGAAAGT +
Preference number: 3 (lower is better)
Translates to: EVILVSQLNETIVGEKPVIQLKV*VCDLES
Trigger: ACTTTCGAGATCACATACCAAGACCTTCAGCTGGAT...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCAGAACTGCTACATTATaGGTTACAGACATCTATGTG +
Preference number: 3 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFRTATL*VTDIYV
Trigger: CACATAGATGTCTGTAACCAATAATGTAGCAGTTCT...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR CAA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATAGAGTTCTGCTTTGCTaGCACTCATACTCTGGACCT +
Preference number: 3 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNRVLLC*HSYSGP
Trigger: AGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTCT...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
3UTR-3UTR CAA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTTACCGATTGAGCAGTTaGCGATCACTAGAGTTCATT +
Preference number: 3 (lower is better)
Translates to: EVILVSQLNETIVGEKPVYRLSS*RSLEFI
Trigger: AATGAACTCTAGTGATCGCAAACTGCTCAATCGGTA...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp CGGGAAGATTATCAAATAGCTGGTCTTTCAGACAGATaGAACATTAAGCACTTATACCTACACGGCCTTTCT +
Preference number: 3 (lower is better)
Translates to: REDYQIAGLSDR*NIKHLYLHGLS
Trigger: AGAAAGGCCGTGTAGGTATAAGTGCTTAATGTTTCATCTGTCTGAAAGACCAGCTATTTGATAATCTTCCCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp GTAGCATGGGAATACAAGTGGCATTCAAAATGCTGCTaGGTTATAACTGTGTCACTGCAATTTACATTGCAC +
Preference number: 3 (lower is better)
Translates to: VAWEYKWHSKCC*VITVSLQFTLH
Trigger: GTGCAATGTAAATTGCAGTGACACAGTTATAACTCAGCAGCATTTTGAATGCCACTTGTATTCCCATGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp TTTACAAGTAGGTTAATCAGGAATACAAGAATCAACTaGTGGTTCCATAGCTTCTGGATCCAGTGTCCCTTT +
Preference number: 3 (lower is better)
Translates to: FTSRLIRNTRIN*WFHSFWIQCPF
Trigger: AAAGGGACACTGGATCCAGAAGCTATGGAACCAGCAGTTGATTCTTGTATTCCTGATTAACCTACTTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR-3UTR CAA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCATCCATGAAGATGGGTTaGGACATGGCTCTTTTAAAC +
Preference number: 3 (lower is better)
Translates to: RTRLVCDVHKNALSHAISSMKMG*DMALLN
Trigger: GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGA...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp ACCAATAAGGAAGTCAACTTTATGACACACGCAAAGTaGCCTTGCAATACCTTACAATTAGTGGGTCACAAA +
Preference number: 3 (lower is better)
Translates to: TNKEVNFMTHAK*PCNTLQLVGHK
Trigger: TTTGTGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTGACTTCCTTATTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR TCA 72 bp ACAGTAGCACCAAAGTGGCCGTGGACAACTTGCAAATaGATGTGGTTATGTTCCAATAAAACTTCATTTATG +
Preference number: 3 (lower is better)
Translates to: TVAPKWPWTTCK*MWLCSNKTSFM
Trigger: CATAAATGAAGTTTTATTGGAACATAACCACATTCATTTGCAAGTTGTCCACGGCCACTTTGGTGCTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR GCA 72 bp GTTGTATTGTGTTCCTTAGGACAGCTACCATGTCATTaGACTTTGCTGCCTAATTCAGTAACAATTCATACT +
Preference number: 3 (lower is better)
Translates to: VVLCSLGQLPCH*TLLPNSVTIHT
Trigger: AGTATGAATTGTTACTGAATTAGGCAGCAAAGTGCAATGACATGGTAGCTGTCCTAAGGAACACAATACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 72 bp TGTATTTACGTAGAAAAAGAAGTTCCATTCAGGCTGTaGACTCCGCTGTTTAGCCGCATATTATATTTATCG +
Preference number: 3 (lower is better)
Translates to: CIYVEKEVPFRL*TPLFSRILYLS
Trigger: CGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAACTTCTTTTTCTACGTAAATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp TGTAGCTATTTCCATCAAAGCAAACCACTACTTCTGTaGCCTTCAACCAATAAGGAAGTCAACTTTATGACA +
Preference number: 3 (lower is better)
Translates to: CSYFHQSKPLLL*PSTNKEVNFMT
Trigger: TGTCATAAAGTTGACTTCCTTATTGGTTGAAGGTCACAGAAGTAGTGGTTTGCTTTGATGGAAATAGCTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR GCA 72 bp AATGGTCTAGTTACACCTTGTGTCAAAGTGCAGAACTaGTACATTATTGGTTACAGACATCTATGTGCTATA +
Preference number: 3 (lower is better)
Translates to: NGLVTPCVKVQN*YIIGYRHLCAI
Trigger: TATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACTAGACCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR GCA 72 bp ATGTACATAAAAACGCTCTTTCTCATGCTATTTCACTaGATTCCGCTTTTCCGCTTTAAATCTTTACAGACG +
Preference number: 3 (lower is better)
Translates to: MYIKTLFLMLFH*IPLFRFKSLQT
Trigger: CGTCTGTAAAGATTTAAAGCGGAAAAGCGGAATGCAGTGAAATAGCATGAGAAAGAGCGTTTTTATGTACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp TGCAGTTTCAGATATGGAATTCAGGGGCAAGTACACTaGCTAATGAATGAGTATATAATGGAAGCAAAACTT +
Preference number: 3 (lower is better)
Translates to: CSFRYGIQGQVH*LMNEYIMEAKL
Trigger: AAGTTTTGCTTCCATTATATACTCATTCATTAGTCAGTGTACTTGCCCCTGAATTCCATATCTGAAACTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp ATCCAATTTACTTCTCCCAGAAATATCTTATCTACCTaGAGTGAACAGTTAAATCCCATGATTAGGTCCCTT +
Preference number: 3 (lower is better)
Translates to: IQFTSPRNILST*SEQLNPMIRSL
Trigger: AAGGGACCTAATCATGGGATTTAACTGTTCACTTCAGGTAGATAAGATATTTCTGGGAGAAGTAAATTGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR TCA 72 bp CAAAACTTAAATGAAACTTTACCACTACTAAACCATTaGACTGCTGTATTACAGGCCATGTCGGGATATTCA +
Preference number: 3 (lower is better)
Translates to: QNLNETLPLLNH*TAVLQAMSGYS
Trigger: TGAATATCCCGACATGGCCTGTAATACAGCAGTTCAATGGTTTAGTAGTGGTAAAGTTTCATTTAAGTTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CCA 72 bp TACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTaGTTACAGACATCTATGTGCTATAAAAACAGCTTT +
Preference number: 3 (lower is better)
Translates to: YTLCQSAELLHY*LQTSMCYKNSF
Trigger: AAAGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR CCA 72 bp TCCTTCATATATAGCAGTAAGACCAAGTCATGTATTTaGAATGAACCATCTGGTCTATTACATACAGTCTAC +
Preference number: 3 (lower is better)
Translates to: SFIYSSKTKSCI*NEPSGLLHTVY
Trigger: GTAGACTGTATGTAATAGACCAGATGGTTCATTCCAAATACATGACTTGGTCTTACTGCTATATATGAAGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GGTTACCCAAGGCTTGTTGTCCATGGTGGTGGTGATGGTGGTGGTGGTGGTGATCTTCAGCCGGGACGATaGCGGGGCGCTCGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: GYPRLVVHGGGDGGGGGDLQPGR*RGARAA
Trigger: AGCGGCGCGAGCGCCCCGCCATCGTCCCGGCTGAAG...ATCACCACCACCACCACCATCACCACCACCATGGACAACAAGCCTTGGGTAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR TCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTAGCGACCGTATGACCTaGCTCCCCAGCACGTCGCCC +
Preference number: 4 (lower is better)
Translates to: LPGHPSAELPHTPSACHFSDRMT*LPSTSP
Trigger: GGGCGACGTGCTGGGGAGTCAGGTCATACGGTCGCT...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTGGCAGGAGGATCGCCTaGGTCCCAGAGGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LPGHPSAELPHTPSACHFGRRIA*VPEVEA
Trigger: AGCCTCCACCTCTGGGACTCAGGCGATCCTCCTGCC...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCGAGCGCTGGAGCCCCTaGTGGGAGGACCCATCGTGC +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCERWSP*WEDPSC
Trigger: GCACGATGGGTCCTCCCAGCAGGGGCTCCAGCGCTC...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTCAGGGGAGCAGTTGCTaGGTCACGGAAGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSQGSSC*VTEGLG
Trigger: CCCCAAACCTTCCGTGACCCAGCAACTGCTCCCCTG...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTTCTCTGAGGCCGACCTaGGCCGCGATCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LPGHPSAELPHTPSACHFSLRPT*AAISSS
Trigger: GCTGCTGCTGATCGCGGCCCAGGTCGGCCTCAGAGA...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647188.2
CDS-3UTR TCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCCCTGCACGGCAGCTGTaGAGTGCCCACCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCPARQL*SAHHCA
Trigger: GGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGG...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCCCGAGCGGCGGCTGCTaGCGGCGGCTTCTTCCCGAG +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFPSGGC*RRLLPE
Trigger: CTCGGGAAGAAGCCGCCGGCAGCAGCCGCCGCTCGG...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647188.2
CDS-3UTR CCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTGCCAGGGACAAGACCTaGAGCTGCTGGGAAGCACAA +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSARDKT*SCWEAQ
Trigger: TTGTGCTTCCCAGCAGCTCCAGGTCTTGTCCCTGGC...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 72 bp GTAGACCCTTGGCCTGGTCCGGTTACCCAAGGCTTGTaGTCCATGGTGGTGGTGATGGTGGTGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VDPWPGPVTQGL*SMVVVMVVVVV
Trigger: CACCACCACCACCACCATCACCACCACCATGGACAACAAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR TCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAGGGGTGTCCGCTCTCTaGGGCCGACCTGGGCCGCGA +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTGVSAL*GRPGPR
Trigger: TCGCGGCCCAGGTCGGCCTCAGAGAGCGGACACCCC...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647188.2
CDS-3UTR GCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTGGCCGCGCCGCAGCCTaGTCAGTCTCTCCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSGRAAA*SVSPRL
Trigger: GAGCCGAGGAGAGACTGAGCAGGCTGCGGCGCGGCC...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647188.2
CDS-3UTR GCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCCCAGCACCCTGGAGCTaGTGCTGCTGCAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCPAPWS*CCCRQP
Trigger: AGGCTGTCTGCAGCAGCAGCAGCTCCAGGGTGCTGG...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTGGTATTAGCAGCCACTaGGCGATTCTGGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSGISSH*AILVGL
Trigger: CAGGCCTACCAGAATCGCCCAGTGGCTGCTAATACC...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTGTTCCATTCAGGCTGTaGACTCCGCTGTTTAGCCGC +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSVPFRL*TPLFSR
Trigger: GCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCGCCGCTTCCTCCGGTaGGTCTCAGCCTCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALRRFLR*VSASGS
Trigger: GGAGCCCGAGGCTGAGACTCACCGGAGGAAGCGGCG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000644942.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTGTCACTGTACTGATGTaGATGGGGCATCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSVTVLM*MGHLSS
Trigger: GCTGGACAGATGCCCCATTCACATCAGTACAGTGAC...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGGGCCGCGCCGCAGCCTaGTCAGTCTCTCCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALGRAAA*SVSPRL
Trigger: GAGCCGAGGAGAGACTGAGCAGGCTGCGGCGCGGCC...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000644942.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTCAGAGATCATACCACTaGACTGCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSQRSYH*TAAWAT
Trigger: TGTTGCCCAGGCTGCAGTGCAGTGGTATGATCTCTG...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTCTTTGTTCAGGGTCCTaGAGAGCCTCCCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSLCSGS*RASQLL
Trigger: AAGAAGCTGGGAGGCTCTCCAGGACCCTGAACAAAG...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 72 bp ACTCAGACCTCCCCAGGACTGGCCACGACCGACCCGTaGATTGCTTCTCAGTGCACCTTGGTTAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: TQTSPGLATTDP*IASQCTLVRRP
Trigger: TGGTCTCCTAACCAAGGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGGCCAGTCCTGGGGAGGTCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCCCACGACCGACCCGTTaGTTGCTTCTCAGTGCACCT +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCPRPTR*LLLSAP
Trigger: AGGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGG...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTGCCTGGGCAACAGGGTaGGATCCGGGACGATGGCGG +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAAWATG*DPGRWR
Trigger: CCGCCATCGTCCCGGATCTCACCCTGTTGCCCAGGC...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643624.1
CDS-3UTR GCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTTCGCCCGGCCTCCCATaGGAACAGAGCTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSSPGLP*EQSWAP
Trigger: TGGAGCCCAGCTCTGTTCGCATGGGAGGCCGGGCGA...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGGAGCGCTGGAGCCCCTaGTGGGAGGACCCATCGTGC +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALERWSP*WEDPSC
Trigger: GCACGATGGGTCCTCCCAGCAGGGGCTCCAGCGCTC...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTAGCCAAAGTCGTCCCTaGTCTTCCAGAGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LPGHPSAELPHTPSACHFSQSRP*SSRALL
Trigger: CAGGAGAGCTCTGGAAGAGCAGGGACGACTTTGGCT...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCTACAGAGCTGGTGGCTaGTGCCCTGGGAAACCCTTC +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCYRAGG*CPGKPF
Trigger: GAAGGGTTTCCCAGGGCACCAGCCACCAGCTCTGTA...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 72 bp ATTGTAGACCCTTGGCCTGGTCCGGTTACCCAAGGCTaGTTGTCCATGGTGGTGGTGATGGTGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: IVDPWPGPVTQG*LSMVVVMVVVV
Trigger: CACCACCACCACCATCACCACCACCATGGACAACAAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR TCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGAGCGACCGTATGACCTaGCTCCCCAGCACGTCGCCC +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALSDRMT*LPSTSP
Trigger: GGGCGACGTGCTGGGGAGTCAGGTCATACGGTCGCT...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTAGCGACCGTATGACCTaGCTCCCCAGCACGTCGCCC +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAASDRMT*LPSTSP
Trigger: GGGCGACGTGCTGGGGAGTCAGGTCATACGGTCGCT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTCCTGCACGGCAGCTGTaGAGTGCCCACCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAPARQL*SAHHCA
Trigger: GGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGG...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACCTGCACGGCAGCTGTaGAGTGCCCACCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIPARQL*SAHHCA
Trigger: GGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGG...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAGATCTCACCCAGCGGTaGGCGCTGGAGCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGDLTQR*ALEPLL
Trigger: CAGCAGGGGCTCCAGCGCTCACCGCTGGGTGAGATC...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTCTGTGCCGATGCTGGTaGGTCGGATCCGACCGGGCT +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAALCRCW*VGSDRA
Trigger: AGCCCGGTCGGATCCGACGCACCAGCATCGGCACAG...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTGTGCCGATGCTGGTaGGTCGGATCCGACCGGGCT +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTLCRCW*VGSDRA
Trigger: AGCCCGGTCGGATCCGACGCACCAGCATCGGCACAG...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATAGAGTCCTGCCTGGCTaGAGGTTCAGAATGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHRVLPG*RFRMAR
Trigger: GCGGGCCATTCTGAACCTGCAGCCAGGCAGGACTCT...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATAGAGCTGGTGGCTGGTaGCCTGGGAAACCCTTCACC +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHRAGGW*PGKPFT
Trigger: GGTGAAGGGTTTCCCAGGGCACCAGCCACCAGCTCT...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTCCCAGAGGTGGAGGCTaGAGTAAGCAGAGATCATAC +
Preference number: 4 (lower is better)
Translates to: LPGHPSAELPHTPSACHFPRGGG*SKQRSY
Trigger: GTATGATCTCTGCTTACTGCAGCCTCCACCTCTGGG...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTAATAGCGGAGCAGTGTaGATAACATATGGTGACCCC +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSNSGAV*ITYGDP
Trigger: GGGGTCACCATATGTTATGCACACTGCTCCGCTATT...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCCTAGAATCGTCTCCCTaGCCCTGTTGGTGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCLESSP*PCWCLR
Trigger: GCGAAGACACCAACAGGGCCAGGGAGACGATTCTAG...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATCAGAGCTGCCCAGACTaGCCAGGGACAAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHQSCPD*PGTRPG
Trigger: TCCAGGTCTTGTCCCTGGCCAGTCTGGGCAGCTCTG...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTTCCAGTGGTCTGGGCTaGGGCCTGAGATTTTGCATT +
Preference number: 4 (lower is better)
Translates to: LPGHPSAELPHTPSACHFSSGLG*GLRFCI
Trigger: AATGCAAAATCTCAGGCCCCAGCCCAGACCACTGGA...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTCTGGTCTCCAAATCCTaGGTTCAAGTGATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSLVSKS*VQVILP
Trigger: TGGGAGAATCACTTGAACCCAGGATTTGGAGACCAG...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACAGCGACCGTATGACCTaGCTCCCCAGCACGTCGCCC +
Preference number: 4 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDSDRMT*LPSTSP
Trigger: GGGCGACGTGCTGGGGAGTCAGGTCATACGGTCGCT...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTAACGCGGTGTTCTGCTaGGTCATCTTAAACAGGTTA +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSNAVFC*VILNRL
Trigger: TAACCTGTTTAAGATGACTCAGCAGAACACCGCGTT...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCCTCTGGGAGGAAGCCTaGCTCCTCTCTTTTCACCCC +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCLWEEA*LLSFHP
Trigger: GGGGTGAAAAGAGAGGAGTCAGGCTTCCTCCCAGAG...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATGAGCTCTCCTGTTCCTaGACAGCCGATAGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHELSCS*TADSPG
Trigger: TCCAGGGCTATCGGCTGTTCAGGAACAGGAGAGCTC...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTCCACCCAAATCTCATTaGATTGTAGCCCCCATAATC +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSPPKSH*IVAPII
Trigger: GATTATGGGGGCTACAATTCAATGAGATTTGGGTGG...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GGTTACCCAAGGCTTGTTGTCCATGGTGGTGGTGATGGTGGTGGTGGTGGTGATATGTACTGGAGGTGGTaGCCGAAGACTGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: GYPRLVVHGGGDGGGGGDMYWRW*PKTETA
Trigger: AGCAGTCTCAGTCTTCGGGCACCACCTCCAGTACAT...ATCACCACCACCACCACCATCACCACCACCATGGACAACAAGCCTTGGGTAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR GCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCTGTGCCGATGCTGGTaGGTCGGATCCGACCGGGCT +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSLCRCW*VGSDRA
Trigger: AGCCCGGTCGGATCCGACGCACCAGCATCGGCACAG...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAACTGTGCCGATGCTGGTaGGTCGGATCCGACCGGGCT +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAELCRCW*VGSDRA
Trigger: AGCCCGGTCGGATCCGACGCACCAGCATCGGCACAG...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCCACCACTGTGCCGATaGTGGTGCGTCGGATCCGAC +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALPPLCR*WCVGSD
Trigger: GTCGGATCCGACGCACCAGCATCGGCACAGTGGTGG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTCCACCACTGTGCCGATaGTGGTGCGTCGGATCCGAC +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAPPLCR*WCVGSD
Trigger: GTCGGATCCGACGCACCAGCATCGGCACAGTGGTGG...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTTCTTCCTTACAGTACTaGATTTCCGTGCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSSSLQY*ISVPKC
Trigger: ACACTTGGGCACGGAAATGCAGTACTGTAAGGAAGA...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCGCGCGCTCCGAACCTaGGCAGCGAGAAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLRALRT*AARSAG
Trigger: CCCGGCGCTTCTCGCTGCGCAGGTTCGGAGCGCGCG...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000644942.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCGCGCGCTCCGAACCTaGGCAGCGAGAAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRRALRT*AARSAG
Trigger: CCCGGCGCTTCTCGCTGCGCAGGTTCGGAGCGCGCG...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTCCGAGCGGCGGCTGCTaGCGGCGGCTTCTTCCCGAG +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSPSGGC*RRLLPE
Trigger: CTCGGGAAGAAGCCGCCGGCAGCAGCCGCCGCTCGG...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000644942.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGGGCCGCGCCGCAGCCTaGTCAGTCTCTCCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKGRAAA*SVSPRL
Trigger: GAGCCGAGGAGAGACTGAGCAGGCTGCGGCGCGGCC...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCTCGCCCGGCCTCCCATaGGAACAGAGCTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSSPGLP*EQSWAP
Trigger: TGGAGCCCAGCTCTGTTCGCATGGGAGGCCGGGCGA...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTCACACACCCAGTGCCTaGCACTTTATTTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LPGHPSAELPHTPSACHFHTPSA*HFILPL
Trigger: CAAGGGCAAAATAAAGTGGCAGGCACTGGGTGTGTG...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATTGGAGCTGCTGCTGCTaGAGACAGCCTGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHWSCCC*RQPEPA
Trigger: TGCTGGTTCAGGCTGTCTGCAGCAGCAGCAGCTCCA...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTCAGTGCATGCCATCATaGCCGGCTAATTTTTGTACT +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSQCMPS*PANFCT
Trigger: AGTACAAAAATTAGCCGGGCATGATGGCATGCACTG...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GGTTACCCAAGGCTTGTTGTCCATGGTGGTGGTGATGGTGGTGGTGGTGGTGATAGCTTGACGATGTACTaGAGGTGGTGCCCGAAGACT +
Preference number: 4 (lower is better)
Translates to: GYPRLVVHGGGDGGGGGDSLTMY*RWCPKT
Trigger: AGTCTTCGGGCACCACCTCCAGTACATCGTCAAGCT...ATCACCACCACCACCACCATCACCACCACCATGGACAACAAGCCTTGGGTAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGACCACTGTGCCGATGCTaGTGCGTCGGATCCGACCGG +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGPLCRC*CVGSDR
Trigger: CCGGTCGGATCCGACGCACCAGCATCGGCACAGTGG...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATGGGTCACGGAAGGTTTaGGGCATCCGCCTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHGSRKV*GIRLWL
Trigger: TAACCAGAGGCGGATGCCCCAAACCTTCCGTGACCC...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTCTTGTATTCTGTCTATaGGGATACCACCCAGAATGC +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSLVFCL*GYHPEC
Trigger: GCATTCTGGGTGGTATCCCCATAGACAGAATACAAG...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCACTACTATACAGAGCTaGTGGCTGGTGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCTTIQS*WLVPWE
Trigger: TTCCCAGGGCACCAGCCACCAGCTCTGTATAGTAGT...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTACGCTGGAGCCCCTGCTaGGAGGACCCATCGTGCCAA +
Preference number: 4 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLRWSPC*EDPSCQ
Trigger: TTGGCACGATGGGTCCTCCCAGCAGGGGCTCCAGCG...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTAAGTCAAGGTCAGCGTaGAGAACTGGAAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LPGHPSAELPHTPSACHFKSRSA*RTGKRP
Trigger: AGGCCTCTTTCCAGTTCTCCACGCTGACCTTGACTT...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGTCTCCTCCGGGACGATaGCGGGGCGCTCGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLSPPGR*RGARAA
Trigger: AGCGGCGCGAGCGCCCCGCCATCGTCCCGGAGGAGA...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647504.1
3UTR CAA 72 bp AGCAGCCACTGGGCGATTCTGGTAGGCCTGATTGCCTaGGTTACCAGTAGAGGAGGAAGATGTCGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSHWAILVGLIA*VTSRGGRCRGR
Trigger: TCTTCCTCGACATCTTCCTCCTCTACTGGTAACCAAGGCAATCAGGCCTACCAGAATCGCCCAGTGGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR CAA 72 bp GCCACGACCGACCCGTTGATTGCTTCTCAGTGCACCTaGGTTAGGAGACCAGTCACGTTCCATCCTATCTTC +
Preference number: 4 (lower is better)
Translates to: ATTDPLIASQCT*VRRPVTFHPIF
Trigger: GAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTCGCCGCTTCCTCCGGTaGGTCTCAGCCTCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSRRFLR*VSASGS
Trigger: GGAGCCCGAGGCTGAGACTCACCGGAGGAAGCGGCG...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000644942.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTGCTTGGTCAAGAATATaGGCAGGTGGAATACCCAGA +
Preference number: 4 (lower is better)
Translates to: LPGHPSAELPHTPSACHFAWSRI*AGGIPR
Trigger: TCTGGGTATTCCACCTGCTCATATTCTTGACCAAGC...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCCCTGAGAATGGCAGGTaGCACAAGCAAATGAACCAC +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCPENGR*HKQMNH
Trigger: GTGGTTCATTTGCTTGTGTCACCTGCCATTCTCAGG...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR TCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCCTTCCACAACGATTGTaGGGCCTCCCCAACCATGCG +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFLPQRL*GLPNHA
Trigger: CGCATGGTTGGGGAGGCCTCACAATCGTTGTGGAAG...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATAGGGCTCTCCCACTGTTaGTTGTCCCCGATGAGCCAC +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIGLSHC*LSPMSH
Trigger: GTGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCC...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTAAGTGCCCACCACTGTaGCGATGCTGGTGCGTCGGA +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAKCPPL*RCWCVG
Trigger: TCCGACGCACCAGCATCGGCACAGTGGTGGGCACTT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTCGCAGTCCATGGCCTaGACGGCAGCTGTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAASQSMA*TAAVKC
Trigger: GCACTTCACAGCTGCCGTGCAGGCCATGGACTGCGA...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGTCGCAGTCCATGGCCTaGACGGCAGCTGTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALSQSMA*TAAVKC
Trigger: GCACTTCACAGCTGCCGTGCAGGCCATGGACTGCGA...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTTCTTCCTGTGGCCTCTaGAACGGGAGAGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSSSCGL*NGRATG
Trigger: TCCTGTGGCTCTCCCGTTGCAGAGGCCACAGGAAGA...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGCCGAGCGGCGGCTGCTaGCGGCGGCTTCTTCCCGAG +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFEPSGGC*RRLLPE
Trigger: CTCGGGAAGAAGCCGCCGGCAGCAGCCGCCGCTCGG...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACCACACGCCTCTTCTTaGCAGAGTCCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTPHASS*QSPAWL
Trigger: CAGCCAGGCAGGACTCTGGCAAGAAGAGGCGTGTGG...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCGTCCACAAGCCCTCTTaGTCTCCAAGTGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCVHKPS*SPSGFS
Trigger: AGAGAAACCACTTGGAGAGCAAGAGGGCTTGTGGAC...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS-3UTR CCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACAGGGGAGCAGTTGCTaGGTCACGGAAGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTQGSSC*VTEGLG
Trigger: CCCCAAACCTTCCGTGACCCAGCAACTGCTCCCCTG...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCAGGGGAGCAGTTGCTaGGTCACGGAAGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALQGSSC*VTEGLG
Trigger: CCCCAAACCTTCCGTGACCCAGCAACTGCTCCCCTG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCACTGTGCCGATGCTaGTGCGTCGGATCCGACCGG +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHPLCRC*CVGSDR
Trigger: CCGGTCGGATCCGACGCACCAGCATCGGCACAGTGG...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GGTTACCCAAGGCTTGTTGTCCATGGTGGTGGTGATGGTGGTGGTGGTGGTGATAGAATTGTAGACCCTTaGCCTGGTCCGGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: GYPRLVVHGGGDGGGGGDRIVDP*PGPVTQ
Trigger: TTGGGTAACCGGACCAGGCCAAGGGTCTACAATTCT...ATCACCACCACCACCACCATCACCACCACCATGGACAACAAGCCTTGGGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CCA 90 bp GGTTACCCAAGGCTTGTTGTCCATGGTGGTGGTGATGGTGGTGGTGGTGGTGATGGTGTTTGTGGAAGCTaGAGGTCCCTCTTCCTTACA +
Preference number: 4 (lower is better)
Translates to: GYPRLVVHGGGDGGGGGDGVCGS*RSLFLT
Trigger: TGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACC...ATCACCACCACCACCACCATCACCACCACCATGGACAACAAGCCTTGGGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCGGGTCACGGAAGGTTTaGGGCATCCGCCTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFGSRKV*GIRLWL
Trigger: TAACCAGAGGCGGATGCCCCAAACCTTCCGTGACCC...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACTATAACACGGGACGATaGCGGGGCGCTCGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNYNTGR*RGARAA
Trigger: AGCGGCGCGAGCGCCCCGCCATCGTCCCGTGTTATA...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644942.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTAAAAATACTATTAGCTaGGTGTGGTGGTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSKNTIS*VWWCAP
Trigger: AGGTGCACACCACCACACCCAGCTAATAGTATTTTT...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCATGGTGGCTGGTGCCCTaGGAAACCCTTCACCGGCTT +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPWWLVP*ETLHRL
Trigger: AAGCCGGTGAAGGGTTTCCCAGGGCACCAGCCACCA...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAGTGGGGACTGGCCCCTaGATGCGTGATCACAAGGGT +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTVGTGP*MRDHKG
Trigger: ACCCTTGTGATCACGCATCCAGGGGCCAGTCCCCAC...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTGTGACTTTCCTTGCTTaGCTAACAAATGAGCCATCT +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSVTFLA*LTNEPS
Trigger: AGATGGCTCATTTGTTAGCCAAGCAAGGAAAGTCAC...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTCGCCGCTTCCTCCGGTaGGTCTCAGCCTCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: EVILVSQLNETIVGEKPVRRFLR*VSASGS
Trigger: GGAGCCCGAGGCTGAGACTCACCGGAGGAAGCGGCG...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647188.2
CDS-3UTR TCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTCGCCGCTTCCTCCGGTaGGTCTCAGCCTCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSRRFLR*VSASGS
Trigger: GGAGCCCGAGGCTGAGACTCACCGGAGGAAGCGGCG...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTAGCGACCGTATGACCTaGCTCCCCAGCACGTCGCCC +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFSDRMT*LPSTSP
Trigger: GGGCGACGTGCTGGGGAGTCAGGTCATACGGTCGCT...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTCCTGCACGGCAGCTGTaGAGTGCCCACCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTPARQL*SAHHCA
Trigger: GGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGG...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTCCTGCACGGCAGCTGTaGAGTGCCCACCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFPARQL*SAHHCA
Trigger: GGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGG...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTCCTGCACGGCAGCTGTaGAGTGCCCACCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPPARQL*SAHHCA
Trigger: GGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGG...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTAGGAGCTTCAGTGCCTaGCCAACCAAGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAARSFSA*PTKRSR
Trigger: CCTGCTCCTCTTGGTTGGTCAGGCACTGAAGCTCCT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATAAGGAGCTTCAGTGCCTaGCCAACCAAGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIRSFSA*PTKRSR
Trigger: CCTGCTCCTCTTGGTTGGTCAGGCACTGAAGCTCCT...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCCAGATAGGAGAGTTCTaGTCCCCGCCACTCAGCATG +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFQIGEF*SPPLSM
Trigger: CATGCTGAGTGGCGGGGATCAGAACTCTCCTATCTG...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTCCACGACCGACCCGTTaGTTGCTTCTCAGTGCACCT +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAPRPTR*LLLSAP
Trigger: AGGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGG...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGGGAGCAGGAAATTGCTaGCGCACCTGGGGACTGTGT +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALGAGNC*RTWGLC
Trigger: ACACAGTCCCCAGGTGCGTCAGCAATTTCCTGCTCC...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTGCACCGGATCGCATCTaGACCTGCATTCTGCGACTA +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSAPDRI*TCILRL
Trigger: TAGTCGCAGAATGCAGGTTCAGATGCGATCCGGTGC...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCAGGACCCAGCTGGGACTaGACCAGGCTACCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPGPSWD*TRLPGK
Trigger: TTTACCAGGTAGCCTGGTTCAGTCCCAGCTGGGTCC...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACGAGTGGTGCCTGAAGTaGGCTCCTCCCCACCTCGTG +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHEWCLK*APPHLV
Trigger: CACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTC...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTCGTGCCAAAGGCCTCTaGGCGCAGAGCTGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPRAKGL*AQSCPD
Trigger: GTCTGGGCAGCTCTGCGCTCAGAGGCCTTTGGCACG...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGCAGGAGGATCGCCTaGGTCCCAGAGGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFGRRIA*VPEVEA
Trigger: AGCCTCCACCTCTGGGACTCAGGCGATCCTCCTGCC...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTCAGGTCTCAAACTCCTaGCCTCAGGTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSQVSNS*PQVICP
Trigger: TGGGCAGATCACCTGAGGTCAGGAGTTTGAGACCTG...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCGCAGTGCACATCTGTTaGGCAAACTTTCGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCAVHIC*ANFRVR
Trigger: CCTAACACGAAAGTTTGCGCAACAGATGTGCACTGC...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCCGCAAGGAAAAGCAGTaGAGTGCACATCTGTTGCGC +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCRKEKQ*SAHLLR
Trigger: GCGCAACAGATGTGCACTGCACTGCTTTTCCTTGCG...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGAGGGCTCTCCCACTGTTaGTTGTCCCCGATGAGCCAC +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRGLSHC*LSPMSH
Trigger: GTGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCC...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACCCACCACTGTGCCGATaGTGGTGCGTCGGATCCGAC +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNPPLCR*WCVGSD
Trigger: GTCGGATCCGACGCACCAGCATCGGCACAGTGGTGG...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCTTGGATGTCCAGCTATaGCAGTCTCTTGGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCLDVQL*QSLGGD
Trigger: ATCCCCGCCAAGAGACTGGCATAGCTGGACATCCAA...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCATCTTCCTGTGGCCTCTaGAACGGGAGAGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPSSCGL*NGRATG
Trigger: TCCTGTGGCTCTCCCGTTGCAGAGGCCACAGGAAGA...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGGGCCAACCACACCCATaGCAGCATCGCCCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLGQPHP*QHRPAS
Trigger: GGAGGCCGGGCGATGCTGGCATGGGTGTGGTTGGCC...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCGACAAGACCTGGAGCTaGTGGGAAGCACAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCDKTWS*WEAQKL
Trigger: GAGCTTTTGTGCTTCCCAGCAGCTCCAGGTCTTGTC...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACATGGAGCTGCTGCTGCTaGAGACAGCCTGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTWSCCC*RQPEPA
Trigger: TGCTGGTTCAGGCTGTCTGCAGCAGCAGCAGCTCCA...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTCCACTCAAAACCATTTaGCTTTTTAGTCGACTACTG +
Preference number: 4 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSPLKTI*LFSRLL
Trigger: CAGTAGTCGACTAAAAAGGCAAATGGTTTTGAGTGG...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GGTTACCCAAGGCTTGTTGTCCATGGTGGTGGTGATGGTGGTGGTGGTGGTGATTTGGTCACTTATGTTTaGCTGGCGACGGTCACTGTA +
Preference number: 4 (lower is better)
Translates to: GYPRLVVHGGGDGGGGGDLVTYV*LATVTV
Trigger: TACAGTGACCGTCGCCAGCCAAACATAAGTGACCAA...ATCACCACCACCACCACCATCACCACCACCATGGACAACAAGCCTTGGGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTGGGTCACGGAAGGTTTaGGGCATCCGCCTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAGSRKV*GIRLCN
Trigger: GTTACAGAGGCGGATGCCCCAAACCTTCCGTGACCC...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000644942.1
CDS-3UTR CCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCCTAGAATCGTCTCCCTaGCCCTGTTGGTGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFLESSP*PCWCLR
Trigger: GCGAAGACACCAACAGGGCCAGGGAGACGATTCTAG...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTCCACTGTGCCGATGCTaGTGCGTCGGATCCGACCGG +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFPLCRC*CVGSDR
Trigger: CCGGTCGGATCCGACGCACCAGCATCGGCACAGTGG...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTAGAGGAGCTATTCGTTaGAGAATTGTAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: LPGHPSAELPHTPSACHFRGAIR*RIVDPW
Trigger: CCAAGGGTCTACAATTCTCCAACGAATAGCTCCTCT...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATCCCTGCACACCAACCTaGGAGACAAAGCAAGACTGT +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHPCTPT*ETKQDC
Trigger: ACAGTCTTGCTTTGTCTCCCAGGTTGGTGTGCAGGG...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAACAGAGCTGCCCAGACTaGCCAGGGACAAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAEQSCPD*PGTRPG
Trigger: TCCAGGTCTTGTCCCTGGCCAGTCTGGGCAGCTCTG...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACCAGCACCCACATTCCTaGGCGAGGGTGACACTCCAG +
Preference number: 4 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDQHPHS*ARVTLQ
Trigger: CTGGAGTGTCACCCTCGCCCAGGAATGTGGGTGCTG...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAAGTGTCCCAGCACCCTaGAGCTGCTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGSVPAP*SCCCCR
Trigger: TCTGCAGCAGCAGCAGCTCCAGGGTGCTGGGACACT...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCAAGTCTCATATCATCCTaGTGGGGTGGGGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPSLISS*WGGGRE
Trigger: CTCCCTTCCCCCACCCCATCAGGATGATATGAGACT...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCAAGCGACCGTATGACCTaGCTCCCCAGCACGTCGCCC +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSSDRMT*LPSTSP
Trigger: GGGCGACGTGCTGGGGAGTCAGGTCATACGGTCGCT...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCACCTGCACGGCAGCTGTaGAGTGCCCACCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSPARQL*SAHHCA
Trigger: GGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGG...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAAGGAGCTTCAGTGCCTaGCCAACCAAGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGRSFSA*PTKRSR
Trigger: CCTGCTCCTCTTGGTTGGTCAGGCACTGAAGCTCCT...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACAGATAGGAGAGTTCTaGTCCCCGCCACTCAGCATG +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTQIGEF*SPPLSM
Trigger: CATGCTGAGTGGCGGGGATCAGAACTCTCCTATCTG...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTCAGATAGGAGAGTTCTaGTCCCCGCCACTCAGCATG +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAQIGEF*SPPLSM
Trigger: CATGCTGAGTGGCGGGGATCAGAACTCTCCTATCTG...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGACCACGACCGACCCGTTaGTTGCTTCTCAGTGCACCT +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRPRPTR*LLLSAP
Trigger: AGGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGG...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTAGGAAGTCAACTTTATaGCACACGCAAAGTGACCTT +
Preference number: 4 (lower is better)
Translates to: LPGHPSAELPHTPSACHFRKSTL*HTQSDL
Trigger: AAGGTCACTTTGCGTGTGTCATAAAGTTGACTTCCT...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTCAGCCTATTTATGTTTaGGAGGCCCAGGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSQPIYV*EAQAGG
Trigger: TCCTCCAGCCTGGGCCTCTCAAACATAAATAGGCTG...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTGAGTGGTGCCTGAAGTaGGCTCCTCCCCACCTCGTG +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPEWCLK*APPHLV
Trigger: CACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTC...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGGATCTCACCCAGCGGTaGGCGCTGGAGCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFEDLTQR*ALEPLL
Trigger: CAGCAGGGGCTCCAGCGCTCACCGCTGGGTGAGATC...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGTCTCAGGGGAGCAGTTaGTGGGTCACGGAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALSQGSS*WVTEGL
Trigger: CAAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGA...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCATGTACTGGAGGTGGTaGCCGAAGACTGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFMYWRW*PKTETA
Trigger: AGCAGTCTCAGTCTTCGGGCACCACCTCCAGTACAT...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACGGGCTCTCCCACTGTTaGTTGTCCCCGATGAGCCAC +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNGLSHC*LSPMSH
Trigger: GTGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCC...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCTGTGCCGATGCTGGTaGGTCGGATCCGACCGGGCT +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLLCRCW*VGSDRA
Trigger: AGCCCGGTCGGATCCGACGCACCAGCATCGGCACAG...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTCCACCACTGTGCCGATaGTGGTGCGTCGGATCCGAC +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPPPLCR*WCVGSD
Trigger: GTCGGATCCGACGCACCAGCATCGGCACAGTGGTGG...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCCCCGCCACTCAGCATaGTTACTGTGCCTGACAAAC +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALPRHSA*LLCLTN
Trigger: GTTTGTCAGGCACAGTAAGCATGCTGAGTGGCGGGG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCGGTGGAGATACCACGTaGCGAGAAAAAGCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCGGDTT*REKAKE
Trigger: TTCTTTTGCTTTTTCTCGGCACGTGGTATCTCCACC...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCAGGCTCTAGTACTGTaGTCCTTCAGGACCCAGCTG +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALQALVL*SFRTQL
Trigger: CAGCTGGGTCCTGAAGGAGCACAGTACTAGAGCCTG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACGCACACCTGCTTGGCTaGTTCCTGGCCACCCTAGTG +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNAHLLG*FLATLV
Trigger: CACTAGGGTGGCCAGGAAGCAGCCAAGCAGGTGTGC...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTTTCTTGCCAGAGTCCTaGCTGGCTGCAGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSFLPES*LAAGSE
Trigger: TTCTGAACCTGCAGCCAGGCAGGACTCTGGCAAGAA...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATTACCTCACTGAGGCATaGACAGCATCTCCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHYLTEA*TASPKW
Trigger: CCACTTAGGAGATGCTGTGCATGCCTCAGTGAGGTA...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCTCAGCTGGAAAGCAATaGTGTTTAGCCCTCCACGGA +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCSAGKQ*CLALHG
Trigger: TCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTCTAGAATCGTCTCCCTaGCCCTGTTGGTGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAALESSP*PCWCLR
Trigger: GCGAAGACACCAACAGGGCCAGGGAGACGATTCTAG...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCACGATGTACTGGAGGTaGTGCCCGAAGACTGAGACT +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFTMYWR*CPKTET
Trigger: AGTCTCAGTCTTCGGGCACCACCTCCAGTACATCGT...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCCACTGTGCCGATGCTaGTGCGTCGGATCCGACCGG +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLPLCRC*CVGSDR
Trigger: CCGGTCGGATCCGACGCACCAGCATCGGCACAGTGG...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTGTAGACCCTTGGCCTaGTCCGGTTACCCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAACRPLA*SGYPRL
Trigger: AAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTACA...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTGGTATTAGCAGCCACTaGGCGATTCTGGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAGISSH*AILVGL
Trigger: CAGGCCTACCAGAATCGCCCAGTGGCTGCTAATACC...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGGGTATTAGCAGCCACTaGGCGATTCTGGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALGISSH*AILVGL
Trigger: CAGGCCTACCAGAATCGCCCAGTGGCTGCTAATACC...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACATCCTATCTTCCTGTaGCCTCTGCAACGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIHPIFL*PLQRES
Trigger: GCTCTCCCGTTGCAGAGGCCACAGGAAGATAGGATG...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATGTGCAGAAGAAATGGTaGAGATACCACGTGCCGAGA +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHVQKKW*RYHVPR
Trigger: TCTCGGCACGTGGTATCTCCACCATTTCTTCTGCAC...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCATACTCTGGACCTGTTaGTGCAATCAAGGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCILWTC*CNQGLA
Trigger: AGCAAGACCTTGATTGCACCAACAGGTCCAGAGTAT...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGTATAACACGGGACGATaGCGGGGCGCTCGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLYNTGR*RGARAA
Trigger: AGCGGCGCGAGCGCCCCGCCATCGTCCCGTGTTATA...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644942.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATCAACACCACAAAAGCTaGGAAGCAGTACAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHQHHKS*EAVQGQ
Trigger: TTGCCCCTGTACTGCTTCCCAGCTTTTGTGGTGTTG...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTATGCCAGAGTCCTGCCTaGCTGCAGGTTCAGAATGGC +
Preference number: 4 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLCQSPA*LQVQNG
Trigger: GCCATTCTGAACCTGCAGCCAGGCAGGACTCTGGCA...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCAGGAGGCCAAGGCAGATaGATCACAAGGTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPGGQGR*ITRSGD
Trigger: GTCTCCTGACCTTGTGATCCATCTGCCTTGGCCTCC...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTAGTGGGAGCAAAGGGTaGGGACTGGCCCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTSGSKG*GLAPGC
Trigger: GCATCCAGGGGCCAGTCCCCACCCTTTGCTCCCACT...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCACGCTGGAGCCCCTGCTaGGAGGACCCATCGTGCCAA +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSRWSPC*EDPSCQ
Trigger: TTGGCACGATGGGTCCTCCCAGCAGGGGCTCCAGCG...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAAGCCTGAACCAGCAGTaGGGAAAGCGGAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGSLNQQ*GKRKQS
Trigger: GCTCTGCTTCCGCTTTCCCCACTGCTGGTTCAGGCT...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCAATCAGCTGTGTGCAGTaGCTCCTGCCCGTAATGGGA +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPISCVQ*LLPVMG
Trigger: TCCCATTACGGGCAGGAGCCACTGCACACAGCTGAT...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 72 bp AGCCTGTCTGCTCAGGTCACGCATGAGAGTTCTGCTTaGCTTGCACTCATACTCTGGACCTGTTGGTGCAAT +
Preference number: 4 (lower is better)
Translates to: SLSAQVTHESSA*LALILWTCWCN
Trigger: ATTGCACCAACAGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCATGCGTGACCTGAGCAGACAGGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTATCTGTCCAGCCATCTaGAGGCCAGCAGCATGGAAT +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAICPAI*RPAAWN
Trigger: ATTCCATGCTGCTGGCCTTCAGATGGCTGGACAGAT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATAATCTGTCCAGCCATCTaGAGGCCAGCAGCATGGAAT +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIICPAI*RPAAWN
Trigger: ATTCCATGCTGCTGGCCTTCAGATGGCTGGACAGAT...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTGTCACTGTACTGATGTaGATGGGGCATCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAVTVLM*MGHLSS
Trigger: GCTGGACAGATGCCCCATTCACATCAGTACAGTGAC...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCGACGGTCACTGTACTaGTGTGAATGGGGCATCTGT +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALRRSLY*CEWGIC
Trigger: ACAGATGCCCCATTCACATCAGTACAGTGACCGTCG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACGACGGTCACTGTACTaGTGTGAATGGGGCATCTGT +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIRRSLY*CEWGIC
Trigger: ACAGATGCCCCATTCACATCAGTACAGTGACCGTCG...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCACTCCAAGAATGTTATaGAGTTTACGGGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCTPRML*SLRVPG
Trigger: ACCAGGAACCCGTAAACTTCATAACATTCTTGGAGT...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACAGGAGCTTCAGTGCCTaGCCAACCAAGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNRSFSA*PTKRSR
Trigger: CCTGCTCCTCTTGGTTGGTCAGGCACTGAAGCTCCT...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTCTTGGCGGGGATTGGAGTAGACGGTCAAATTAACGTCCATAGCTCCATTCTGCATGCTTACTGTGCCTaGCAAACTTCACCACAACCG +
Preference number: 4 (lower is better)
Translates to: LLAGIGVDGQINVHSSILHAYCA*QTSPQP
Trigger: CGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATG...CAGAATGGAGCTATGGACGTTAATTTGACCGTCTACTCCAATCCCCGCCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR TCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCAGATAGGAGAGTTCTaGTCCCCGCCACTCAGCATG +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSQIGEF*SPPLSM
Trigger: CATGCTGAGTGGCGGGGATCAGAACTCTCCTATCTG...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGTGCTCAGGTCACGCATaGGAGTTCTGCTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALCSGHA*EFCFAC
Trigger: GCAAGCAAAGCAGAACTCTCATGCGTGACCTGAGCA...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGATGGCCCCTGGATGCGTaGTCACAAGGGTCTAATGAC +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGWPLDA*SQGSND
Trigger: GTCATTAGACCCTTGTGATCACGCATCCAGGGGCCA...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGCGTGCCAAAGGCCTCTaGGCGCAGAGCTGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFERAKGL*AQSCPD
Trigger: GTCTGGGCAGCTCTGCGCTCAGAGGCCTTTGGCACG...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACCTCTGGGAGGAAGCCTaGCTCCTCTCTTTTCACCCC +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNLWEEA*LLSFHP
Trigger: GGGGTGAAAAGAGAGGAGTCAGGCTTCCTCCCAGAG...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACGAGCTCTCCTGTTCCTaGACAGCCGATAGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNELSCS*TADSPG
Trigger: TCCAGGGCTATCGGCTGTTCAGGAACAGGAGAGCTC...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCCTCCACACGATCATATaGCTTTACAACCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCLHTII*LYNLSK
Trigger: TTTGGACAGGTTGTAAAGGCATATGATCGTGTGGAG...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTATGTACTGGAGGTGGTaGCCGAAGACTGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAMYWRW*PKTETA
Trigger: AGCAGTCTCAGTCTTCGGGCACCACCTCCAGTACAT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGATGTACTGGAGGTGGTaGCCGAAGACTGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALMYWRW*PKTETA
Trigger: AGCAGTCTCAGTCTTCGGGCACCACCTCCAGTACAT...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTGGGCTCTCCCACTGTTaGTTGTCCCCGATGAGCCAC +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTGLSHC*LSPMSH
Trigger: GTGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCC...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTGGGCTCTCCCACTGTTaGTTGTCCCCGATGAGCCAC +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPGLSHC*LSPMSH
Trigger: GTGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCC...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTAAGTGCCCACCACTGTaGCGATGCTGGTGCGTCGGA +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPKCPPL*RCWCVG
Trigger: TCCGACGCACCAGCATCGGCACAGTGGTGGGCACTT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTAAGTGCCCACCACTGTaGCGATGCTGGTGCGTCGGA +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTKCPPL*RCWCVG
Trigger: TCCGACGCACCAGCATCGGCACAGTGGTGGGCACTT...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGTCGCAGTCCATGGCCTaGACGGCAGCTGTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKSQSMA*TAAVKC
Trigger: GCACTTCACAGCTGCCGTGCAGGCCATGGACTGCGA...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCTCGCAGTCCATGGCCTaGACGGCAGCTGTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFSQSMA*TAAVKC
Trigger: GCACTTCACAGCTGCCGTGCAGGCCATGGACTGCGA...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGGATGTCCAGCTATaGCAGTCTCTTGGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAALDVQL*QSLGGD
Trigger: ATCCCCGCCAAGAGACTGGCATAGCTGGACATCCAA...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATATTGGATGTCCAGCTATaGCAGTCTCTTGGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFILDVQL*QSLGGD
Trigger: ATCCCCGCCAAGAGACTGGCATAGCTGGACATCCAA...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCCCCGCCACTCAGCATaGTTACTGTGCCTGACAAAC +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSPRHSA*LLCLTN
Trigger: GTTTGTCAGGCACAGTAAGCATGCTGAGTGGCGGGG...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACTCTTCCTGTGGCCTCTaGAACGGGAGAGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNSSCGL*NGRATG
Trigger: TCCTGTGGCTCTCCCGTTGCAGAGGCCACAGGAAGA...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTGACCGACCCGTTGATTaGTTCTCAGTGCACCTTGGT +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAADRPVD*FSVHLG
Trigger: ACCAAGGTGCACTGAGAAGCAATCAACGGGTCGGTC...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGGACCGACCCGTTGATTaGTTCTCAGTGCACCTTGGT +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALDRPVD*FSVHLG
Trigger: ACCAAGGTGCACTGAGAAGCAATCAACGGGTCGGTC...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTAGCCCAATATCCATGTaGCTAGGTAAAATTCTCACA +
Preference number: 4 (lower is better)
Translates to: LPGHPSAELPHTPSACHFSPISM*LGKILT
Trigger: TGTGAGAATTTTACCTAGGCACATGGATATTGGGCT...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAGGCCAACCACACCCATaGCAGCATCGCCCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISGQPHP*QHRPAS
Trigger: GGAGGCCGGGCGATGCTGGCATGGGTGTGGTTGGCC...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTGCACACCTGCTTGGCTaGTTCCTGGCCACCCTAGTG +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPAHLLG*FLATLV
Trigger: CACTAGGGTGGCCAGGAAGCAGCCAAGCAGGTGTGC...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCAAACGCTCTTTCTCATaGTATTTCACTGCATTCCGC +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCKRSFS*YFTAFR
Trigger: GCGGAATGCAGTGAAATAGCATGAGAAAGAGCGTTT...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTAGAGTCCTGCCTGGCTaGAGGTTCAGAATGGCCCGC +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFRVLPG*RFRMAR
Trigger: GCGGGCCATTCTGAACCTGCAGCCAGGCAGGACTCT...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCCCCTGGAGCTGCTGCTaGTGCAGACAGCCTGAACCA +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFPWSCC*CRQPEP
Trigger: TGGTTCAGGCTGTCTGCAGCAGCAGCAGCTCCAGGG...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCAGAGATCATACCACTaGACTGCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALQRSYH*TAAWAT
Trigger: TGTTGCCCAGGCTGCAGTGCAGTGGTATGATCTCTG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTCTGCACACACTCTCTTaGTTGCCGCCACCTAAGACT +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAALHTLS*LPPPKT
Trigger: AGTCTTAGGTGGCGGCAAGCAAGAGAGTGTGTGCAG...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTCAGGGGAGCAGTTGCTaGGTCACGGAAGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFQGSSC*VTEGLG
Trigger: CCCCAAACCTTCCGTGACCCAGCAACTGCTCCCCTG...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGACTAGAATCGTCTCCCTaGCCCTGTTGGTGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRLESSP*PCWCLR
Trigger: GCGAAGACACCAACAGGGCCAGGGAGACGATTCTAG...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTACGATGTACTGGAGGTaGTGCCCGAAGACTGAGACT +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAATMYWR*CPKTET
Trigger: AGTCTCAGTCTTCGGGCACCACCTCCAGTACATCGT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATAACGATGTACTGGAGGTaGTGCCCGAAGACTGAGACT +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFITMYWR*CPKTET
Trigger: AGTCTCAGTCTTCGGGCACCACCTCCAGTACATCGT...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCAACGATGTACTGGAGGTaGTGCCCGAAGACTGAGACT +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPTMYWR*CPKTET
Trigger: AGTCTCAGTCTTCGGGCACCACCTCCAGTACATCGT...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAACCACTGTGCCGATGCTaGTGCGTCGGATCCGACCGG +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKPLCRC*CVGSDR
Trigger: CCGGTCGGATCCGACGCACCAGCATCGGCACAGTGG...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTAGAAAATTGGTATGTTaGATGTCCAGCTATGCCAGT +
Preference number: 4 (lower is better)
Translates to: LPGHPSAELPHTPSACHFRKLVC*MSSYAS
Trigger: ACTGGCATAGCTGGACATCCAACATACCAATTTTCT...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATACTGTGACTGGGATGTaGCAAGTTAAAATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHTVTGM*QVKMGE
Trigger: CTCCCCCATTTTAACTTGCCACATCCCAGTCACAGT...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCTGGTTCCATAGCTTCTaGATCCAGTGTCCCTTTACC +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCWFHSF*IQCPFT
Trigger: GGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACGGGTCACGGAAGGTTTaGGGCATCCGCCTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNGSRKV*GIRLWL
Trigger: TAACCAGAGGCGGATGCCCCAAACCTTCCGTGACCC...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643624.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCAGGTTTTCCAACGTCTaGTCAACAGACATCCCTAGC +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCRFSNV*STDIPS
Trigger: GCTAGGGATGTCTGTTGACCAGACGTTGGAAAACCT...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTACCATGCGAACAGAGCTaGGCTCCACTTGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLPCEQS*APLVLS
Trigger: GGACAAGACAAGTGGAGCCCAGCTCTGTTCGCATGG...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCTCAACACTTTCTGCTaGCCACACTCAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSLNTFC*PHSGSG
Trigger: GCCTGAGCCTGAGTGTGGCCAGCAGAAAGTGTTGAG...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTCTGTCCAACAGTGAGTaGATGATGATTCCAAATTCA +
Preference number: 4 (lower is better)
Translates to: LPGHPSAELPHTPSACHFLSNSE*MMIPNS
Trigger: TGAATTTGGAATCATCATCCACTCACTGTTGGACAG...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACGTTCCATTCAGGCTGTaGACTCCGCTGTTTAGCCGC +
Preference number: 4 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDVPFRL*TPLFSR
Trigger: GCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACGGAGGCCAAGGCAGATaGATCACAAGGTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDGGQGR*ITRSGD
Trigger: GTCTCCTGACCTTGTGATCCATCTGCCTTGGCCTCC...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGCAGCACCCACATTCCTaGGCGAGGGTGACACTCCAG +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKQHPHS*ARVTLQ
Trigger: CTGGAGTGTCACCCTCGCCCAGGAATGTGGGTGCTG...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCGTGGGAGCCCTCCCTaGACAAGCTCCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHRGSPP*TSSSSE
Trigger: TTCAGATGAGGAGCTTGTCCAGGGAGGGCTCCCACG...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACAGCCTGAACCAGCAGTaGGGAAAGCGGAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNSLNQQ*GKRKQS
Trigger: GCTCTGCTTCCGCTTTCCCCACTGCTGGTTCAGGCT...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTAGTGTCCCAGCACCCTaGAGCTGCTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTSVPAP*SCCCCR
Trigger: TCTGCAGCAGCAGCAGCTCCAGGGTGCTGGGACACT...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTAAGCAAGAGGGGACTGTaGAAGCCACATGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLSKRGL*KPHGEA
Trigger: TGCTTCCCCATGTGGCTTCCACAGTCCCCTCTTGCT...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 72 bp TGTCTGCTCAGGTCACGCATGAGAGTTCTGCTTTGCTaGCACTCATACTCTGGACCTGTTGGTGCAATCAAG +
Preference number: 4 (lower is better)
Translates to: CLLRSRMRVLLC*HSYSGPVGAIK
Trigger: CTTGATTGCACCAACAGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCATGCGTGACCTGAGCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR CAA 72 bp ATGCGAACAGAGCTGGGCTCCACTTGTCTTGTCCACTaGTTTCCTCTGTCCTGCATCATGAACTTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: MRTELGSTCLVH*FPLSCIMNFCH
Trigger: GTGGCAAAAGTTCATGATGCAGGACAGAGGAAACAAGTGGACAAGACAAGTGGAGCCCAGCTCTGTTCGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 72 bp CACTGGGCAGCAAGGGGCTGGACAATCTTCTATCCCTaGATAGATCTAAAAACCATCCTAGGGCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: HWAARGWTIFYP*IDLKTILGLRK
Trigger: CTTCCTCAGCCCTAGGATGGTTTTTAGATCTATCAAGGGATAGAAGATTGTCCAGCCCCTTGCTGCCCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACAGTCTCATATCATCCTaGTGGGGTGGGGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNSLISS*WGGGRE
Trigger: CTCCCTTCCCCCACCCCATCAGGATGATATGAGACT...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGACGACGGTCACTGTACTaGTGTGAATGGGGCATCTGT +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRRRSLY*CEWGIC
Trigger: ACAGATGCCCCATTCACATCAGTACAGTGACCGTCG...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGAGGAGCTTCAGTGCCTaGCCAACCAAGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKRSFSA*PTKRSR
Trigger: CCTGCTCCTCTTGGTTGGTCAGGCACTGAAGCTCCT...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTAGGAGCTTCAGTGCCTaGCCAACCAAGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFRSFSA*PTKRSR
Trigger: CCTGCTCCTCTTGGTTGGTCAGGCACTGAAGCTCCT...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCAAAAGAGGATACCTCTaGGCTATCCATGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCKRGYL*AIHEDG
Trigger: CCCATCTTCATGGATAGCTCAGAGGTATCCTCTTTT...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTGGAGCAGGAAATTGCTaGCGCACCTGGGGACTGTGT +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTGAGNC*RTWGLC
Trigger: ACACAGTCCCCAGGTGCGTCAGCAATTTCCTGCTCC...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTGGAGCAGGAAATTGCTaGCGCACCTGGGGACTGTGT +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPGAGNC*RTWGLC
Trigger: ACACAGTCCCCAGGTGCGTCAGCAATTTCCTGCTCC...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACGCACCGGATCGCATCTaGACCTGCATTCTGCGACTA +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNAPDRI*TCILRL
Trigger: TAGTCGCAGAATGCAGGTTCAGATGCGATCCGGTGC...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAATGCAAGAACACCCACTaGGAGCAGCCAAAATCTGGG +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAECKNTH*EQPKSG
Trigger: CCCAGATTTTGGCTGCTCTCAGTGGGTGTTCTTGCA...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGGCTCTGAATCTCCCGTaGCTGCAGTTTCAGATATGG +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALALNLP*LQFQIW
Trigger: CCATATCTGAAACTGCAGTCACGGGAGATTCAGAGC...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAGCTCTGAATCTCCCGTaGCTGCAGTTTCAGATATGG +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTALNLP*LQFQIW
Trigger: CCATATCTGAAACTGCAGTCACGGGAGATTCAGAGC...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATATGTTTAAGGCTGCAGTaGGCTGCAATCACACCACCA +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFICLRLQ*AAITPP
Trigger: TGGTGGTGTGATTGCAGCTCACTGCAGCCTTAAACA...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACTGGCCCCTGGATGCGTaGTCACAAGGGTCTAATGAC +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNWPLDA*SQGSND
Trigger: GTCATTAGACCCTTGTGATCACGCATCCAGGGGCCA...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTCATGTAAGCGCTCTGTaGAGAGCAAACCACCACTCA +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAHVSAL*RANHHS
Trigger: TGAGTGGTGGTTTGCTCTTCACAGAGCGCTTACATG...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCATGTAAGCGCTCTGTaGAGAGCAAACCACCACTCA +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALHVSAL*RANHHS
Trigger: TGAGTGGTGGTTTGCTCTTCACAGAGCGCTTACATG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTGACTTTGAATGTGCATaGATGACCTGGGGACCTTGT +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSDFECA*MTWGPC
Trigger: ACAAGGTCCCCAGGTCATTCATGCACATTCAAAGTC...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCTTTCTCACTCTAAAGTaGGGTGTTGGGGCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFFLTLK*GVGAVS
Trigger: AGACACTGCCCCAACACCTCACTTTAGAGTGAGAAA...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAAACTGGAAAGAGGCCTaGCTAGAAGACAGACTGTCG +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTNWKEA*LEDRLS
Trigger: CGACAGTCTGTCTTCTAGTCAGGCCTCTTTCCAGTT...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACATGAGCCGCCACACCTaGCCAGTTTTCTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDMSRHT*PVFSAL
Trigger: CAAAGCTGAGAAAACTGGTCAGGTGTGGCGGCTCAT...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCAGGTCTCAAACTCCTaGCCTCAGGTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHQVSNS*PQVICP
Trigger: TGGGCAGATCACCTGAGGTCAGGAGTTTGAGACCTG...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCTATTCCACACTGATATaGGTTAGCTGTGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFYSTLI*VSCVPT
Trigger: GGTGGGGACACAGCTAACTCATATCAGTGTGGAATA...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCGTCCAAAGGAACCTTTaGCTATCAAGGAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCVQRNL*LSRSQF
Trigger: AAATTGACTCCTTGATAGGCAAAGGTTCCTTTGGAC...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCATGTACTGGAGGTGGTaGCCGAAGACTGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSMYWRW*PKTETA
Trigger: AGCAGTCTCAGTCTTCGGGCACCACCTCCAGTACAT...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCAGGGCTCTCCCACTGTTaGTTGTCCCCGATGAGCCAC +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSGLSHC*LSPMSH
Trigger: GTGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCC...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTGGGCTCTCCCACTGTTaGTTGTCCCCGATGAGCCAC +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSGLSHC*LSPMSH
Trigger: GTGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCC...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCACTGTGCCGATGCTGGTaGGTCGGATCCGACCGGGCT +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISLCRCW*VGSDRA
Trigger: AGCCCGGTCGGATCCGACGCACCAGCATCGGCACAG...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTCCACCACTGTGCCGATaGTGGTGCGTCGGATCCGAC +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSPPLCR*WCVGSD
Trigger: GTCGGATCCGACGCACCAGCATCGGCACAGTGGTGG...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGAAGTGCCCACCACTGTaGCGATGCTGGTGCGTCGGA +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLKCPPL*RCWCVG
Trigger: TCCGACGCACCAGCATCGGCACAGTGGTGGGCACTT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGAAGTGCCCACCACTGTaGCGATGCTGGTGCGTCGGA +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRKCPPL*RCWCVG
Trigger: TCCGACGCACCAGCATCGGCACAGTGGTGGGCACTT...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGTCGCAGTCCATGGCCTaGACGGCAGCTGTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRSQSMA*TAAVKC
Trigger: GCACTTCACAGCTGCCGTGCAGGCCATGGACTGCGA...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCGACCGACCCGTTGATTaGTTCTCAGTGCACCTTGGT +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSDRPVD*FSVHLG
Trigger: ACCAAGGTGCACTGAGAAGCAATCAACGGGTCGGTC...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCGCATTAAGGACTGTCTaGAAAAGCATGTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCALRTV*KSMSKS
Trigger: ACTTTTGGACATGCTTTTGCAGACAGTCCTTAATGC...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTCTAGAACTGAGTGCCTaGTATCTCGTCTTCGTGTGT +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSLELSA*YLVFVC
Trigger: ACACACGAAGACGAGATAGCAGGCACTCAGTTCTAG...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCATGGCCTAGAACTGAGTaGCTGCTATCTCGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPWPRTE*LLSRLR
Trigger: ACGAAGACGAGATAGCAGGCACTCAGTTCTAGGCCA...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCAAAACAAGCATCCAGTaGCTTCAACACAGGCATACG +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCKTSIQ*LQHRHT
Trigger: CGTATGCCTGTGTTGAAGGCACTGGATGCTTGTTTT...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAACACCAAACTCCAGCTTaGGTGACAAAGCCAGACACC +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAEHQTPA*VTKPDT
Trigger: GGTGTCTGGCTTTGTCACGCAAGCTGGAGTTTGGTG...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCAAACTCCAGCTTaGGTGACAAAGCCAGACACC +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSHQTPA*VTKPDT
Trigger: GGTGTCTGGCTTTGTCACGCAAGCTGGAGTTTGGTG...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCATGGGAGGACCCATCGTaGCAAAGGCCTCTGAGCGCA +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSWEDPS*QRPLSA
Trigger: TGCGCTCAGAGGCCTTTGGCACGATGGGTCCTCCCA...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGACCAGCACCCTGGAGCTaGTGCTGCTGCAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRPAPWS*CCCRQP
Trigger: AGGCTGTCTGCAGCAGCAGCAGCTCCAGGGTGCTGG...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGACCCAGAGGTGGAGGCTaGAGTAAGCAGAGATCATAC +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRPRGGG*SKQRSY
Trigger: GTATGATCTCTGCTTACTGCAGCCTCCACCTCTGGG...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTAATAGCGGAGCAGTGTaGATAACATATGGTGACCCC +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSNSGAV*ITYGDP
Trigger: GGGGTCACCATATGTTATGCACACTGCTCCGCTATT...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACAAAGGGCAGTTCCCCTaGACACACTCTCTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDKGQFP*THSLAC
Trigger: GCAAGCAAGAGAGTGTGTGCAGGGGAACTGCCCTTT...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCAAAGGGCAGTTCCCCTaGACACACTCTCTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSKGQFP*THSLAC
Trigger: GCAAGCAAGAGAGTGTGTGCAGGGGAACTGCCCTTT...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGGTCACGGAAGGTTTaGGGCATCCGCCTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFGSRKV*GIRLCN
Trigger: GTTACAGAGGCGGATGCCCCAAACCTTCCGTGACCC...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000644942.1
CDS-3UTR CCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTGGGTCACGGAAGGTTTaGGGCATCCGCCTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTGSRKV*GIRLCN
Trigger: GTTACAGAGGCGGATGCCCCAAACCTTCCGTGACCC...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000644942.1
CDS-3UTR CCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACCTAGAATCGTCTCCCTaGCCCTGTTGGTGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNLESSP*PCWCLR
Trigger: GCGAAGACACCAACAGGGCCAGGGAGACGATTCTAG...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGAAGCTTGACGATGTACTaGAGGTGGTGCCCGAAGACT +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRSLTMY*RWCPKT
Trigger: AGTCTTCGGGCACCACCTCCAGTACATCGTCAAGCT...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCAACGTGCGAGCTCACCTaGGGACTGTGTGTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSTCELT*GLCVSQ
Trigger: CTGCGAGACACACAGTCCCCAGGTGAGCTCGCACGT...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACTGTAGACCCTTGGCCTaGTCCGGTTACCCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNCRPLA*SGYPRL
Trigger: AAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTACA...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGAGAATTGTAGACCCTTaGCCTGGTCCGGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALRIVDP*PGPVTQ
Trigger: TTGGGTAACCGGACCAGGCCAAGGGTCTACAATTCT...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTAGAATTGTAGACCCTTaGCCTGGTCCGGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAARIVDP*PGPVTQ
Trigger: TTGGGTAACCGGACCAGGCCAAGGGTCTACAATTCT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAAGAATTGTAGACCCTTaGCCTGGTCCGGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTRIVDP*PGPVTQ
Trigger: TTGGGTAACCGGACCAGGCCAAGGGTCTACAATTCT...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTAAGACAGGGATGTCATaGAGTGGTGACTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAKTGMS*SGDCGQ
Trigger: TTGGCCACAGTCACCACTCCATGACATCCCTGTCTT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGAAGACAGGGATGTCATaGAGTGGTGACTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALKTGMS*SGDCGQ
Trigger: TTGGCCACAGTCACCACTCCATGACATCCCTGTCTT...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCAGGTGTTTGTGGAAGCTaGAGGTCCCTCTTCCTTACA +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPGVCGS*RSLFLT
Trigger: TGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACC...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAGTGCAGAAGAAATGGTaGAGATACCACGTGCCGAGA +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTVQKKW*RYHVPR
Trigger: TCTCGGCACGTGGTATCTCCACCATTTCTTCTGCAC...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTTGGTTCCATAGCTTCTaGATCCAGTGTCCCTTTACC +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSWFHSF*IQCPFT
Trigger: GGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATCTTGCACTCATACTCTaGACCTGTTGGTGCAATCAA +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHLALIL*TCWCNQ
Trigger: TTGATTGCACCAACAGGTCCAGAGTATGAGTGCAAG...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAGTAAATCTCACAAAATaGCGCGCGCTCCGAACCTGC +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGVNLTK*RALRTC
Trigger: GCAGGTTCGGAGCGCGCGCCATTTTGTGAGATTTAC...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCGTAAATCTCACAAAATaGCGCGCGCTCCGAACCTGC +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSVNLTK*RALRTC
Trigger: GCAGGTTCGGAGCGCGCGCCATTTTGTGAGATTTAC...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACAACCAACCAACAAAATaGCGACGGACCGACCCGGTC +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHNQPTK*RRTDPV
Trigger: GACCGGGTCGGTCCGTCGCCATTTTGTTGGTTGGTT...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647188.2
CDS-3UTR CCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCACAACACCACAAAAGCTaGGAAGCAGTACAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPQHHKS*EAVQGQ
Trigger: TTGCCCCTGTACTGCTTCCCAGCTTTTGTGGTGTTG...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGTGGTGGCTGGTGCCCTaGGAAACCCTTCACCGGCTT +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLWWLVP*ETLHRL
Trigger: AAGCCGGTGAAGGGTTTCCCAGGGCACCAGCCACCA...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGGTGGGGACTGGCCCCTaGATGCGTGATCACAAGGGT +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRVGTGP*MRDHKG
Trigger: ACCCTTGTGATCACGCATCCAGGGGCCAGTCCCCAC...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGAAGTGGGAGCAAAGGGTaGGGACTGGCCCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRSGSKG*GLAPGC
Trigger: GCATCCAGGGGCCAGTCCCCACCCTTTGCTCCCACT...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGGCCAGGGACAAGACCTaGAGCTGCTGGGAAGCACAA +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKARDKT*SCWEAQ
Trigger: TTGTGCTTCCCAGCAGCTCCAGGTCTTGTCCCTGGC...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTCAGATTCTCATCCAGTaGTCTGGGCTGGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPQILIQ*SGLGPE
Trigger: CTCAGGCCCCAGCCCAGACCACTGGATGAGAATCTG...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCTTGGGAACAGAGAAATaGGCAAAGAGCAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCLGTEK*AKSRLL
Trigger: CAAAAGCCTGCTCTTTGCCCATTTCTCTGTTCCCAA...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CACTGCAATTTACATTGCACAGAGCGGCAGGGCAAAATGATGAGAATGCCACATACTGTGGAAGCCACATaGGGAAGCACACACTGTGGA +
Preference number: 4 (lower is better)
Translates to: HCNLHCTERQGKMMRMPHTVEAT*GSTHCG
Trigger: TCCACAGTGTGTGCTTCCCCATGTGGCTTCCACAGT...ATGTGGCATTCTCATCATTTTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTATACCACCCAAGCTaGTCTCCAAATCCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTLYHPS*SPNPGF
Trigger: GAACCCAGGATTTGGAGACCAGCTTGGGTGGTATAG...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 72 bp AACTCCTGTCATGGGGGACTCTTCTCTATCAGCCCCTaGCCTCATTGTCAGATGTCCTTCAGTCATGTAATG +
Preference number: 4 (lower is better)
Translates to: NSCHGGLFSISP*PHCQMSFSHVM
Trigger: CATTACATGACTGAAGGACATCTGACAATGAGGCAAGGGGCTGATAGAGAAGAGTCCCCCATGACAGGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR TCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTAGTCTCATATCATCCTaGTGGGGTGGGGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPSLISS*WGGGRE
Trigger: CTCCCTTCCCCCACCCCATCAGGATGATATGAGACT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACCGACGGTCACTGTACTaGTGTGAATGGGGCATCTGT +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNRRSLY*CEWGIC
Trigger: ACAGATGCCCCATTCACATCAGTACAGTGACCGTCG...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACCCTCATTGGCACCACTaGACAGAGGTTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNPHWHH*TEVLQC
Trigger: ACACTGGAGAACCTCTGTTCAGTGGTGCCAATGAGG...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCGTGTTAATCTCCTCCTaGTTCAAGCAGCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFVLISS*FKQLCT
Trigger: AGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACAC...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CACTGCAATTTACATTGCACAGAGCGGCAGGGCAAAATGATGAGAATGCCACATCCTCTGAGCTATCCATaGAGATGGGTTTGGACATGG +
Preference number: 4 (lower is better)
Translates to: HCNLHCTERQGKMMRMPHPLSYP*RWVWTW
Trigger: CCATGTCCAAACCCATCTTCATGGATAGCTCAGAGG...ATGTGGCATTCTCATCATTTTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACTGCTCAGGTCACGCATaGGAGTTCTGCTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNCSGHA*EFCFAC
Trigger: GCAAGCAAAGCAGAACTCTCATGCGTGACCTGAGCA...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GGTTACCCAAGGCTTGTTGTCCATGGTGGTGGTGATGGTGGTGGTGGTGGTGATTTTCTAGGCTTCTTTTaGTCCTGGACAGGTAAATTA +
Preference number: 4 (lower is better)
Translates to: GYPRLVVHGGGDGGGGGDFLGFF*SWTGKL
Trigger: TAATTTACCTGTCCAGGATCAAAAGAAGCCTAGAAA...ATCACCACCACCACCACCATCACCACCACCATGGACAACAAGCCTTGGGTAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR TCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGGGAGCAGGAAATTGCTaGCGCACCTGGGGACTGTGT +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLGAGNC*RTWGLC
Trigger: ACACAGTCCCCAGGTGCGTCAGCAATTTCCTGCTCC...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCAGAATTCTAGAATTCTaGTATGGCCCCGTACGAGGA +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFRILEF*YGPVRG
Trigger: TCCTCGTACGGGGCCATATCAGAATTCTAGAATTCT...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGATTCCTGGTCCAGGGTaGAAGCCCAGTAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKIPGPG*KPSRHP
Trigger: TGGATGCCTACTGGGCTTTCACCCTGGACCAGGAAT...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTAAACACACCAAGCGATaGGCCACTTACCTCAATGAA +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSKHTKR*ATYLNE
Trigger: TTCATTGAGGTAAGTGGCTCATCGCTTGGTGTGTTT...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCAGGACCCAGCTGGGACTaGACCAGGCTACCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSGPSWD*TRLPGK
Trigger: TTTACCAGGTAGCCTGGTTCAGTCCCAGCTGGGTCC...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACCAGCCTATTTATGTTTaGGAGGCCCAGGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNQPIYV*EAQAGG
Trigger: TCCTCCAGCCTGGGCCTCTCAAACATAAATAGGCTG...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACTCCAGGCAGTCTCCCTaGGGTTGTACAGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDSRQSP*GCTEKF
Trigger: GAATTTCTCTGTACAACCTCAGGGAGACTGCCTGGA...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGATCCAGGCAGTCTCCCTaGGGTTGTACAGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGSRQSP*GCTEKF
Trigger: GAATTTCTCTGTACAACCTCAGGGAGACTGCCTGGA...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATATGTCCACTTATAAACTaGTGCTGGCAAGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFICPLIN*CWQASS
Trigger: TGAGGAGGCTTGCCAGCATCAGTTTATAAGTGGACA...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTAGCAGGAAAGCAGGTTaGTGCTTCAGGGAGACAAAA +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAASRKAG*CFRETK
Trigger: TTTTGTCTCCCTGAAGCATCAACCTGCTTTCCTGCT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTCTTCCACAACGATTGTaGGGCCTCCCCAACCATGCG +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSLPQRL*GLPNHA
Trigger: CGCATGGTTGGGGAGGCCTCACAATCGTTGTGGAAG...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCTCAGGGGAGCAGTTaGTGGGTCACGGAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTSQGSS*WVTEGL
Trigger: CAAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGA...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTTCTCAGGGGAGCAGTTaGTGGGTCACGGAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFSQGSS*WVTEGL
Trigger: CAAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGA...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTCTCAGGGGAGCAGTTaGTGGGTCACGGAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPSQGSS*WVTEGL
Trigger: CAAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGA...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACCGCAAGGAAAAGCAGTaGAGTGCACATCTGTTGCGC +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNRKEKQ*SAHLLR
Trigger: GCGCAACAGATGTGCACTGCACTGCTTTTCCTTGCG...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAAAGTGCCCACCACTGTaGCGATGCTGGTGCGTCGGA +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKKCPPL*RCWCVG
Trigger: TCCGACGCACCAGCATCGGCACAGTGGTGGGCACTT...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACTTGGATGTCCAGCTATaGCAGTCTCTTGGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNLDVQL*QSLGGD
Trigger: ATCCCCGCCAAGAGACTGGCATAGCTGGACATCCAA...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCATCTCTATCAGCCCCTTaGCTCATTGTCAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPSLSAP*LIVRCP
Trigger: AGGACATCTGACAATGAGGCAAGGGGCTGATAGAGA...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCCCCCGCCACTCAGCATaGTTACTGTGCCTGACAAAC +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFPRHSA*LLCLTN
Trigger: GTTTGTCAGGCACAGTAAGCATGCTGAGTGGCGGGG...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGGAGTTCTGCTTTGCTTaGACTCATACTCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALEFCFA*THTLDL
Trigger: CAGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTC...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCCACATCCAGTCGAAATaGTACCAACTAAAATATGAG +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCHIQSK*YQLKYE
Trigger: CTCATATTTTAGTTGGTAGCATTTCGACTGGATGTG...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACGGATACCACCCAGAATaGACCGGATCGCATCTGAAC +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHGYHPE*TGSHLN
Trigger: GTTCAGATGCGATCCGGTGCATTCTGGGTGGTATCC...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAACTGGGACCTTGGCTATaGATAATGCCAAAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAELGPWL*IMPKRA
Trigger: GGCTCTCTTTGGCATTATGCATAGCCAAGGTCCCAG...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACATTCAGGTACAGCAGCTaGATACTGGAAGAGAGACCT +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTFRYSS*ILEERP
Trigger: AGGTCTCTCTTCCAGTATGCAGCTGCTGTACCTGAA...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTCAGGTACAGCAGCTaGATACTGGAAGAGAGACCT +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAFRYSS*ILEERP
Trigger: AGGTCTCTCTTCCAGTATGCAGCTGCTGTACCTGAA...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCCAGGCTCTAGTACTGTaGTCCTTCAGGACCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFQALVL*SFRTQL
Trigger: CAGCTGGGTCCTGAAGGAGCACAGTACTAGAGCCTG...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTCCACACGCCTCTTCTTaGCAGAGTCCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSPHASS*QSPAWL
Trigger: CAGCCAGGCAGGACTCTGGCAAGAAGAGGCGTGTGG...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTAGAGCTGGTGGCTGGTaGCCTGGGAAACCCTTCACC +
Preference number: 4 (lower is better)
Translates to: EVILVSQLNETIVGEKPVRAGGW*PGKPFT
Trigger: GGTGAAGGGTTTCCCAGGGCACCAGCCACCAGCTCT...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAATCAGCTGGAAAGCAATaGTGTTTAGCCCTCCACGGA +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAESAGKQ*CLALHG
Trigger: TCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACGACAAGACCTGGAGCTaGTGGGAAGCACAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNDKTWS*WEAQKL
Trigger: GAGCTTTTGTGCTTCCCAGCAGCTCCAGGTCTTGTC...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTTGGGAGGACCCATCGTaGCAAAGGCCTCTGAGCGCA +
Preference number: 4 (lower is better)
Translates to: EVILVSQLNETIVGEKPVWEDPS*QRPLSA
Trigger: TGCGCTCAGAGGCCTTTGGCACGATGGGTCCTCCCA...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACCCTTCGCCATCAGTTaGCTATATGAGAATGACCAG +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIPFAIS*LYENDQ
Trigger: CTGGTCATTCTCATATAGGCAACTGATGGCGAAGGG...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAACCCTGGAGCTGCTGCTaGTGCAGACAGCCTGAACCA +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKPWSCC*CRQPEP
Trigger: TGGTTCAGGCTGTCTGCAGCAGCAGCAGCTCCAGGG...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCCAGCTACCATGTCATTaGACTTTGCTGCCTAATTCA +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCQLPCH*TLLPNS
Trigger: TGAATTAGGCAGCAAAGTGCAATGACATGGTAGCTG...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGTTGGTCACTTATGTTTaGCTGGCGACGGTCACTGTA +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALLVTYV*LATVTV
Trigger: TACAGTGACCGTCGCCAGCCAAACATAAGTGACCAA...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAACAGGGGAGCAGTTGCTaGGTCACGGAAGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKQGSSC*VTEGLG
Trigger: CCCCAAACCTTCCGTGACCCAGCAACTGCTCCCCTG...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATAAGAATATGAGCAGGTaGAATACCCAGAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHKNMSR*NTQNFH
Trigger: GTGGAAGTTCTGGGTATTCCACCTGCTCATATTCTT...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGTTTACGGGTTCCTGGTaGTTTGTACTCCCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALFTGSW*FVLPFS
Trigger: GGAAAACGGGAGTACAAACCACCAGGAACCCGTAAA...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CACACAAGAAACAAACTCAAGTTTCAATGTAGTCACGAGCTAGCTACAGGACTCTGTAGACCCTTGGCCTaGTCCGGTTACCCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: HTRNKLKFQCSHELATGLCRPLA*SGYPRL
Trigger: AAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTACA...GAGTCCTGTAGCTAGCTCGTGACTACATTGAAACTTGAGTTTGTTTCTTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTTGTAGACCCTTGGCCTaGTCCGGTTACCCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFCRPLA*SGYPRL
Trigger: AAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTACA...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCAAGACAGGGATGTCATaGAGTGGTGACTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSKTGMS*SGDCGQ
Trigger: TTGGCCACAGTCACCACTCCATGACATCCCTGTCTT...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGGGTATTAGCAGCCACTaGGCGATTCTGGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKGISSH*AILVGL
Trigger: CAGGCCTACCAGAATCGCCCAGTGGCTGCTAATACC...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTGGTATTAGCAGCCACTaGGCGATTCTGGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPGISSH*AILVGL
Trigger: CAGGCCTACCAGAATCGCCCAGTGGCTGCTAATACC...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGCATCCTATCTTCCTGTaGCCTCTGCAACGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKHPIFL*PLQRES
Trigger: GCTCTCCCGTTGCAGAGGCCACAGGAAGATAGGATG...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTCATCCTATCTTCCTGTaGCCTCTGCAACGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFHPIFL*PLQRES
Trigger: GCTCTCCCGTTGCAGAGGCCACAGGAAGATAGGATG...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCATGGTTCCATAGCTTCTaGATCCAGTGTCCCTTTACC +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPWFHSF*IQCPFT
Trigger: GGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCACTCCTCCCCACCTCGTaGCATCACCTCTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSLLPTS*HHLFSR
Trigger: TCTGCTGAAGAGGTGATGCCACGAGGTGGGGAGGAG...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTTGCCAGAGTCCTGCCTaGCTGCAGGTTCAGAATGGC +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSCQSPA*LQVQNG
Trigger: GCCATTCTGAACCTGCAGCCAGGCAGGACTCTGGCA...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACACTACTATACAGAGCTaGTGGCTGGTGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHTTIQS*WLVPWE
Trigger: TTCCCAGGGCACCAGCCACCAGCTCTGTATAGTAGT...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTGGATCTGAACCTCTTTaGGATTCTAGAGAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSGSEPL*DSREGN
Trigger: GTTTCCCTCTCTAGAATCCCAAAGAGGTTCAGATCC...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTAAGAATGACCAGAAATTaGCCATTCCCAGGCCCGACT +
Preference number: 4 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLRMTRN*PFPGPT
Trigger: AGTCGGGCCTGGGAATGGCCAATTTCTGGTCATTCT...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCTTGGGAACAGAGAAATaGGCAAAGAGCAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFLGTEK*AKSRLL
Trigger: CAAAAGCCTGCTCTTTGCCCATTTCTCTGTTCCCAA...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTATGAAGACTAACATGTaGGAGAAGCAAGAGGGGACT +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSMKTNM*EKQEGT
Trigger: AGTCCCCTCTTGCTTCTCCCACATGTTAGTCTTCAT...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTGGTCTCCAAATCCTaGGTTCAAGTGATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTLVSKS*VQVILP
Trigger: TGGGAGAATCACTTGAACCCAGGATTTGGAGACCAG...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGACTATACCACCCAAGCTaGTCTCCAAATCCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRLYHPS*SPNPGF
Trigger: GAACCCAGGATTTGGAGACCAGCTTGGGTGGTATAG...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTTACTTTTTGTGGAGATaGGGGGTCTCACTATACCAC +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSYFLWR*GVSLYH
Trigger: GTGGTATAGTGAGACCCCCCATCTCCACAAAAAGTA...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTAAGCCTCCTGAGTAGCTaGAATTACCAGTGCATGCCA +
Preference number: 4 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLSLLSS*NYQCMP
Trigger: TGGCATGCACTGGTAATTCCAGCTACTCAGGAGGCT...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTAGTCTCATATCATCCTaGTGGGGTGGGGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSSLISS*WGGGRE
Trigger: CTCCCTTCCCCCACCCCATCAGGATGATATGAGACT...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCTCCGCCTCTGTAACATaGCAATATCAGGCATCACCT +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSSASVT*QYQASP
Trigger: AGGTGATGCCTGATATTGTCATGTTACAGAGGCGGA...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR TCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACATCCTCTGCCCCAACTaGCAAGAACTGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNILCPN*QELPKS
Trigger: TGACTTTGGCAGTTCTTGTCAGTTGGGGCAGAGGAT...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTCCTCATTGGCACCACTaGACAGAGGTTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTPHWHH*TEVLQC
Trigger: ACACTGGAGAACCTCTGTTCAGTGGTGCCAATGAGG...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTCCTCATTGGCACCACTaGACAGAGGTTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFPHWHH*TEVLQC
Trigger: ACACTGGAGAACCTCTGTTCAGTGGTGCCAATGAGG...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAGCTTGGTCAAGAATATaGGCAGGTGGAATACCCAGA +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGAWSRI*AGGIPR
Trigger: TCTGGGTATTCCACCTGCTCATATTCTTGACCAAGC...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCATCAGCTGTTTTCTTaGAGAAACTGTGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALHQLFS*RNCAAE
Trigger: CTCTGCAGCACAGTTTCTTCAAGAAAACAGCTGATG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTCATCAGCTGTTTTCTTaGAGAAACTGTGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAHQLFS*RNCAAE
Trigger: CTCTGCAGCACAGTTTCTTCAAGAAAACAGCTGATG...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGGGTGACACAAGCAAATaGACCACGTGCGAGCTCACC +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLGDTSK*TTCELT
Trigger: GGTGAGCTCGCACGTGGTTCATTTGCTTGTGTCACC...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR TCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGAGGAGCTTCAGTGCCTaGCCAACCAAGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFERSFSA*PTKRSR
Trigger: CCTGCTCCTCTTGGTTGGTCAGGCACTGAAGCTCCT...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGGTGTTAATCTCCTCCTaGTTCAAGCAGCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALVLISS*FKQLCT
Trigger: AGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACAC...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCTGAGCTATCCATaGAGATGGGTTTGGACATGG +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHPLSYP*RWVWTW
Trigger: CCATGTCCAAACCCATCTTCATGGATAGCTCAGAGG...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGAAAAGAGGATACCTCTaGGCTATCCATGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALKRGYL*AIHEDG
Trigger: CCCATCTTCATGGATAGCTCAGAGGTATCCTCTTTT...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCAAACCACTACTTCTGTaGCCTTCAACCAATAAGGAA +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCKPLLL*PSTNKE
Trigger: TTCCTTATTGGTTGAAGGTCACAGAAGTAGTGGTTT...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAAACGCGGTGTTCTGCTaGGTCATCTTAAACAGGTTA +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTNAVFC*VILNRL
Trigger: TAACCTGTTTAAGATGACTCAGCAGAACACCGCGTT...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAAGAATTCTAGAATTCTaGTATGGCCCCGTACGAGGA +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTRILEF*YGPVRG
Trigger: TCCTCGTACGGGGCCATATCAGAATTCTAGAATTCT...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGATTCCTGGTCCAGGGTaGAAGCCCAGTAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLIPGPG*KPSRHP
Trigger: TGGATGCCTACTGGGCTTTCACCCTGGACCAGGAAT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCAGCCACTTACCTCAATaGACATGTCTTCCACAAAAC +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFSHLPQ*TCLPQN
Trigger: GTTTTGTGGAAGACATGTTCATTGAGGTAAGTGGCT...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGTGCAAGAACACCCACTaGGAGCAGCCAAAATCTGGG +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKCKNTH*EQPKSG
Trigger: CCCAGATTTTGGCTGCTCTCAGTGGGTGTTCTTGCA...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCTGCCACCACTTTGCCTaGCCCAAACTTAATGCACTT +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSCHHFA*PKLNAL
Trigger: AAGTGCATTAAGTTTGGGTCAGGCAAAGTGGTGGCA...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CACTGCAATTTACATTGCACAGAGCGGCAGGGCAAAATGATGAGAATGCCACATTGTCCACTTATAAACTaGTGCTGGCAAGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: HCNLHCTERQGKMMRMPHCPLIN*CWQASS
Trigger: TGAGGAGGCTTGCCAGCATCAGTTTATAAGTGGACA...ATGTGGCATTCTCATCATTTTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACAACTGGAAAGAGGCCTaGCTAGAAGACAGACTGTCG +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHNWKEA*LEDRLS
Trigger: CGACAGTCTGTCTTCTAGTCAGGCCTCTTTCCAGTT...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAATGCATCACTCAGACTTaGTTCTTCAGAGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAECITQT*FFRASW
Trigger: CCAGGAAGCTCTGAAGAATCAAGTCTGAGTGATGCA...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATCAGCCATGTAAAATGTaGAAATCACCCTTAGTTTGG +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHQPCKM*KSPLVW
Trigger: CCAAACTAAGGGTGATTTTCACATTTTACATGGCTG...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATCATTCAAAATGCTGCTaGGTTATAACTGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHHSKCC*VITVSL
Trigger: CAGTGACACAGTTATAACTCAGCAGCATTTTGAATG...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACCACCCAAATCTCATTaGATTGTAGCCCCCATAATC +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIPPKSH*IVAPII
Trigger: GATTATGGGGGCTACAATTCAATGAGATTTGGGTGG...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CACTGCAATTTACATTGCACAGAGCGGCAGGGCAAAATGATGAGAATGCCACATTATTCCACACTGATATaGGTTAGCTGTGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: HCNLHCTERQGKMMRMPHYSTLI*VSCVPT
Trigger: GGTGGGGACACAGCTAACTCATATCAGTGTGGAATA...ATGTGGCATTCTCATCATTTTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATTTTTCTATTCCACACTaGTATGAGTTAGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHFSIPH*YELAVS
Trigger: GGACACAGCTAACTCATATCAGTGTGGAATAGAAAA...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGACCTAGGTCAGCCTCATaGAAACTACTGACTCCAAGA +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRPRSAS*KLLTPR
Trigger: TCTTGGAGTCAGTAGTTTTCATGAGGCTGACCTAGG...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGGTCTCTCCTCCTGTATaGATCGTCTTCTTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALVSPPV*IVFFQV
Trigger: GACTTGAAAGAAGACGATGCATACAGGAGGAGAGAC...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAGTCTCTCCTCCTGTATaGATCGTCTTCTTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTVSPPV*IVFFQV
Trigger: GACTTGAAAGAAGACGATGCATACAGGAGGAGAGAC...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGTCTCAGGGGAGCAGTTaGTGGGTCACGGAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRSQGSS*WVTEGL
Trigger: CAAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGA...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCGCAGTGCACATCTGTTaGGCAAACTTTCGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSAVHIC*ANFRVR
Trigger: CCTAACACGAAAGTTTGCGCAACAGATGTGCACTGC...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGAGCAGTGCACATCTGTTaGGCAAACTTTCGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRAVHIC*ANFRVR
Trigger: CCTAACACGAAAGTTTGCGCAACAGATGTGCACTGC...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCCGCAAGGAAAAGCAGTaGAGTGCACATCTGTTGCGC +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFRKEKQ*SAHLLR
Trigger: GCGCAACAGATGTGCACTGCACTGCTTTTCCTTGCG...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTCGCAAGGAAAAGCAGTaGAGTGCACATCTGTTGCGC +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPRKEKQ*SAHLLR
Trigger: GCGCAACAGATGTGCACTGCACTGCTTTTCCTTGCG...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCTCTTTAAGTTCCAAGTaGCATCTGGCAACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCSLSSK*HLATSQ
Trigger: TTGAGAAGTTGCCAGATGGCACTTGGAACTTAAAGA...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCTTGGATGTCCAGCTATaGCAGTCTCTTGGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFLDVQL*QSLGGD
Trigger: ATCCCCGCCAAGAGACTGGCATAGCTGGACATCCAA...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTCATGGGGCCCTTTATaGAAATTATGTGCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAASWGPL*KLCAVP
Trigger: AGGCACTGCACATAATTTGCATAAAGGGCCCCATGA...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAAGTACTGCATTTCCGTaGCCAAGTGTGTTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTSTAFP*PSVFRG
Trigger: TCCTCTAAACACACTTGGGCACGGAAATGCAGTACT...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCATCTTCCTTACAGTACTaGATTTCCGTGCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPSSLQY*ISVPKC
Trigger: ACACTTGGGCACGGAAATGCAGTACTGTAAGGAAGA...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTCCCCGCCACTCAGCATaGTTACTGTGCCTGACAAAC +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSPRHSA*LLCLTN
Trigger: GTTTGTCAGGCACAGTAAGCATGCTGAGTGGCGGGG...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCATTGATTGCTTCTCAGTaGACCTTGGTTAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPLIASQ*TLVRRP
Trigger: TGGTCTCCTAACCAAGGTGCACTGAGAAGCAATCAA...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGTTGATTGCTTCTCAGTaGACCTTGGTTAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALLIASQ*TLVRRP
Trigger: TGGTCTCCTAACCAAGGTGCACTGAGAAGCAATCAA...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATGCATTAAGGACTGTCTaGAAAAGCATGTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHALRTV*KSMSKS
Trigger: ACTTTTGGACATGCTTTTGCAGACAGTCCTTAATGC...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGACTCTGGACCTGTTGGTaGAATCAAGGTCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGLWTCW*NQGLAF
Trigger: GAAAGCAAGACCTTGATTGCACCAACAGGTCCAGAG...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCGAGTTCTGCTTTGCTTaGACTCATACTCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSEFCFA*THTLDL
Trigger: CAGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTC...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAGAGTTCTGCTTTGCTTaGACTCATACTCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGEFCFA*THTLDL
Trigger: CAGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTC...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGAGTTCTGCTTTGCTTaGACTCATACTCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAEEFCFA*THTLDL
Trigger: CAGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTC...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCGCAGAGGTAGATTACTaGTTCTTTTCTAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCAEVDY*FFSRLL
Trigger: AAGAAGCCTAGAAAAGAAGCAGTAATCTACCTCTGC...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCTAGAACTGAGTGCCTaGTATCTCGTCTTCGTGTGT +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSLELSA*YLVFVC
Trigger: ACACACGAAGACGAGATAGCAGGCACTCAGTTCTAG...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACTGGCCTAGAACTGAGTaGCTGCTATCTCGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHWPRTE*LLSRLR
Trigger: ACGAAGACGAGATAGCAGGCACTCAGTTCTAGGCCA...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGATACCACCCAGAATaGACCGGATCGCATCTGAAC +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFGYHPE*TGSHLN
Trigger: GTTCAGATGCGATCCGGTGCATTCTGGGTGGTATCC...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCAAAAACAAGCATCCAGTaGCTTCAACACAGGCATACG +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPKTSIQ*LQHRHT
Trigger: CGTATGCCTGTGTTGAAGGCACTGGATGCTTGTTTT...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGTCATTAACAACTCCCTaGCCGGCACACCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLSLTTP*PAHLLG
Trigger: GCCAAGCAGGTGTGCCGGGCAGGGAGTTGTTAATGA...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCCTCATGCTATTTCACTaGATTCCGCTTTTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFLMLFH*IPLFRF
Trigger: AAAGCGGAAAAGCGGAATGCAGTGAAATAGCATGAG...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTAGCCAAAGTCGTCCCTaGTCTTCCAGAGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSSQSRP*SSRALL
Trigger: CAGGAGAGCTCTGGAAGAGCAGGGACGACTTTGGCT...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCAAACACTATCAAGTCTaGAGCAAAAGTGAATTTCCA +
Preference number: 4 (lower is better)
Translates to: APWLGDQSRSILSSCGLCKHYQV*SKSEFP
Trigger: TGGAAATTCACTTTTGCTGCAGACTTGATAGTGTTT...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGGGGCACTGGGGCCGCTaGAGAAGAAATACCAAAACT +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKGHWGR*RRNTKT
Trigger: AGTTTTGGTATTTCTTCTGCAGCGGCCCCAGTGCCC...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS-3UTR CCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTAAGGCAGAAACCTGTTaGTCACTTATGTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAKAETC*SLMFGW
Trigger: CCAGCCAAACATAAGTGACCAACAGGTTTCTGCCTT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGAAGGCAGAAACCTGTTaGTCACTTATGTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALKAETC*SLMFGW
Trigger: CCAGCCAAACATAAGTGACCAACAGGTTTCTGCCTT...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCAAAGGCAGAAACCTGTTaGTCACTTATGTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPKAETC*SLMFGW
Trigger: CCAGCCAAACATAAGTGACCAACAGGTTTCTGCCTT...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCTAGAATCGTCTCCCTaGCCCTGTTGGTGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLLESSP*PCWCLR
Trigger: GCGAAGACACCAACAGGGCCAGGGAGACGATTCTAG...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTGGGACCACATATCAATaGCAAGGTCATAAGGCATTC +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAGTTYQ*QGHKAF
Trigger: GAATGCCTTATGACCTTGCCATTGATATGTGGTCCC...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCAGGGACCACATATCAATaGCAAGGTCATAAGGCATTC +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPGTTYQ*QGHKAF
Trigger: GAATGCCTTATGACCTTGCCATTGATATGTGGTCCC...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAATTTACGGGTTCCTGGTaGTTTGTACTCCCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAEFTGSW*FVLPFS
Trigger: GGAAAACGGGAGTACAAACCACCAGGAACCCGTAAA...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTACGATGTACTGGAGGTaGTGCCCGAAGACTGAGACT +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPTMYWR*CPKTET
Trigger: AGTCTCAGTCTTCGGGCACCACCTCCAGTACATCGT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTAGCTTGACGATGTACTaGAGGTGGTGCCCGAAGACT +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTSLTMY*RWCPKT
Trigger: AGTCTTCGGGCACCACCTCCAGTACATCGTCAAGCT...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGAGCTTGACGATGTACTaGAGGTGGTGCCCGAAGACT +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKSLTMY*RWCPKT
Trigger: AGTCTTCGGGCACCACCTCCAGTACATCGTCAAGCT...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGAGAGGAGCTATTCGTTaGAGAATTGTAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALRGAIR*RIVDPW
Trigger: CCAAGGGTCTACAATTCTCCAACGAATAGCTCCTCT...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAAGAGGAGCTATTCGTTaGAGAATTGTAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTRGAIR*RIVDPW
Trigger: CCAAGGGTCTACAATTCTCCAACGAATAGCTCCTCT...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTGGTATTAGCAGCCACTaGGCGATTCTGGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSGISSH*AILVGL
Trigger: CAGGCCTACCAGAATCGCCCAGTGGCTGCTAATACC...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATAGAAAATTGGTATGTTaGATGTCCAGCTATGCCAGT +
Preference number: 4 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHRKLVC*MSSYAS
Trigger: ACTGGCATAGCTGGACATCCAACATACCAATTTTCT...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGACACAAACTCCTGTCATaGGGGACTCTTCTCTATCAG +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRHKLLS*GTLLYQ
Trigger: CTGATAGAGAAGAGTCCCCCATGACAGGAGTTTGTG...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACCACAAACTCCTGTCATaGGGGACTCTTCTCTATCAG +
Preference number: 4 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDHKLLS*GTLLYQ
Trigger: CTGATAGAGAAGAGTCCCCCATGACAGGAGTTTGTG...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAACACAAACTCCTGTCATaGGGGACTCTTCTCTATCAG +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAEHKLLS*GTLLYQ
Trigger: CTGATAGAGAAGAGTCCCCCATGACAGGAGTTTGTG...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAACTGTGACTGGGATGTaGCAAGTTAAAATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGTVTGM*QVKMGE
Trigger: CTCCCCCATTTTAACTTGCCACATCCCAGTCACAGT...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCACTGTGACTGGGATGTaGCAAGTTAAAATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSTVTGM*QVKMGE
Trigger: CTCCCCCATTTTAACTTGCCACATCCCAGTCACAGT...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACGTGCAGAAGAAATGGTaGAGATACCACGTGCCGAGA +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHVQKKW*RYHVPR
Trigger: TCTCGGCACGTGGTATCTCCACCATTTCTTCTGCAC...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAGGGTCACGGAAGGTTTaGGGCATCCGCCTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKGSRKV*GIRLWL
Trigger: TAACCAGAGGCGGATGCCCCAAACCTTCCGTGACCC...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000643624.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTGTAAATCTCACAAAATaGCGCGCGCTCCGAACCTGC +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPVNLTK*RALRTC
Trigger: GCAGGTTCGGAGCGCGCGCCATTTTGTGAGATTTAC...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000644942.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTAAATCAGCGTCCAGTTaGAGAAACACTTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSKSASS*RNTLSP
Trigger: AGGAGACAAAGTGTTTCTCCAACTGGACGCTGATTT...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGACTCCTCCCCACCTCGTaGCATCACCTCTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRLLPTS*HHLFSR
Trigger: TCTGCTGAAGAGGTGATGCCACGAGGTGGGGAGGAG...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCATGGATTTGCGGGCAATaGAAGTGGGAGTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSWICGQ*KWEWCL
Trigger: CAGGCACCACTCCCACTTCCATTGCCCGCAAATCCA...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACAAGACCTGGAGCTGCTaGGAAGCACAAAAGCTCATC +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHKTWSC*EAQKLI
Trigger: GATGAGCTTTTGTGCTTCCCAGCAGCTCCAGGTCTT...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTCGTGGGAGCCCTCCCTaGACAAGCTCCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSRGSPP*TSSSSE
Trigger: TTCAGATGAGGAGCTTGTCCAGGGAGGGCTCCCACG...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGACAGATTCTCATCCAGTaGTCTGGGCTGGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRQILIQ*SGLGPE
Trigger: CTCAGGCCCCAGCCCAGACCACTGGATGAGAATCTG...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGGGGAAGCACACACTGTaGAGCGTCACCCAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFEGKHTL*SVTQQC
Trigger: ACACTGCTGGGTGACGCTCCACAGTGTGTGCTTCCC...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTACTGTGGAAGCCACATaGGGAAGCACACACTGTGGA +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFTVEAT*GSTHCG
Trigger: TCCACAGTGTGTGCTTCCCCATGTGGCTTCCACAGT...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACACAGTAGCACCAAAGTaGCCGTGGACAACTTGCAAA +
Preference number: 4 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDTVAPK*PWTTCK
Trigger: TTTGCAAGTTGTCCACGGCCACTTTGGTGCTACTGT...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 72 bp AAATTGGTATGTTGGATGTCCAGCTATGCCAGTCTCTaGGCGGGGATTGGAGTAGACGGTCAAATTAACGTC +
Preference number: 4 (lower is better)
Translates to: KLVCWMSSYASL*AGIGVDGQINV
Trigger: GACGTTAATTTGACCGTCTACTCCAATCCCCGCCAAGAGACTGGCATAGCTGGACATCCAACATACCAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338785.8
3UTR CAA 72 bp CCACCTCGTGGCATCACCTCTTCAGCAGAACAAGGCTaGTCTGTGATGTACATAAAAACGCTCTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: PPRGITSSAEQG*SVMYIKTLFLM
Trigger: CATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCTGCTGAAGAGGTGATGCCACGAGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAAGTCTCATATCATCCTaGTGGGGTGGGGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKSLISS*WGGGRE
Trigger: CTCCCTTCCCCCACCCCATCAGGATGATATGAGACT...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTAGTCTCATATCATCCTaGTGGGGTGGGGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSSLISS*WGGGRE
Trigger: CTCCCTTCCCCCACCCCATCAGGATGATATGAGACT...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGATCTGTCCAGCCATCTaGAGGCCAGCAGCATGGAAT +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLICPAI*RPAAWN
Trigger: ATTCCATGCTGCTGGCCTTCAGATGGCTGGACAGAT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTATCTGTCCAGCCATCTaGAGGCCAGCAGCATGGAAT +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSICPAI*RPAAWN
Trigger: ATTCCATGCTGCTGGCCTTCAGATGGCTGGACAGAT...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCAGTCACTGTACTGATGTaGATGGGGCATCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSVTVLM*MGHLSS
Trigger: GCTGGACAGATGCCCCATTCACATCAGTACAGTGAC...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGGTCACTGTACTGATGTaGATGGGGCATCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLVTVLM*MGHLSS
Trigger: GCTGGACAGATGCCCCATTCACATCAGTACAGTGAC...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCTTAGTTAGAGGTTGCTaGATCTGGTCAGAATATGAT +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCLVRGC*IWSEYD
Trigger: ATCATATTCTGACCAGATTCAGCAACCTCTAACTAA...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGTGTCATGTTTGTTCATaGGCTCAAGAAGTCGCACTT +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALCHVCS*AQEVAL
Trigger: AAGTGCGACTTCTTGAGCTCATGAACAAACATGACA...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCGGTTTTAGATCACAGTaGATGATACTAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCGFRSQ*MILSSG
Trigger: TCCAGAACTTAGTATCATTCACTGTGATCTAAAACC...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTACAAAGTCAACTATCTTaGTTGCACTGCGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLQSQLS*LHCVWG
Trigger: ACCCCAAACGCAGTGCAATCAAGATAGTTGACTTTG...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCCTCATTGGCACCACTaGACAGAGGTTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLPHWHH*TEVLQC
Trigger: ACACTGGAGAACCTCTGTTCAGTGGTGCCAATGAGG...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAACTCCAAGAATGTTATaGAGTTTACGGGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTTPRML*SLRVPG
Trigger: ACCAGGAACCCGTAAACTTCATAACATTCTTGGAGT...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAACAGTGCTGCTCCACCTaGGAATGGCAGGTGACACAA +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKQCCST*EWQVTQ
Trigger: TTGTGTCACCTGCCATTCTCAGGTGGAGCAGCACTG...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR TCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTCCTCTGAGCTATCCATaGAGATGGGTTTGGACATGG +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTPLSYP*RWVWTW
Trigger: CCATGTCCAAACCCATCTTCATGGATAGCTCAGAGG...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTCCTCTGAGCTATCCATaGAGATGGGTTTGGACATGG +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPPLSYP*RWVWTW
Trigger: CCATGTCCAAACCCATCTTCATGGATAGCTCAGAGG...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGCCTCTGAGCTATCCATaGAGATGGGTTTGGACATGG +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKPLSYP*RWVWTW
Trigger: CCATGTCCAAACCCATCTTCATGGATAGCTCAGAGG...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTCATGCTTACTGTGCCTaGCAAACTTCACCACAACCG +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPHAYCA*QTSPQP
Trigger: CGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATG...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCATGCTCAGGTCACGCATaGGAGTTCTGCTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSCSGHA*EFCFAC
Trigger: GCAAGCAAAGCAGAACTCTCATGCGTGACCTGAGCA...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAAACGCGGTGTTCTGCTaGGTCATCTTAAACAGGTTA +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAENAVFC*VILNRL
Trigger: TAACCTGTTTAAGATGACTCAGCAGAACACCGCGTT...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTGGAGCAGGAAATTGCTaGCGCACCTGGGGACTGTGT +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAGAGNC*RTWGLC
Trigger: ACACAGTCCCCAGGTGCGTCAGCAATTTCCTGCTCC...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAGCCTCCTCTATGCTTTaGAGAAGGATTCACAGGTTT +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGASSML*RRIHRF
Trigger: AAACCTGTGAATCCTTCTTCAAAGCATAGAGGAGGC...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCCAGGGGCAAGTACACTaGCTAATGAATGAGTATATA +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFQGQVH*LMNEYI
Trigger: TATATACTCATTCATTAGTCAGTGTACTTGCCCCTG...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATAAAAATCCTGCTAGTGTaGTGGTCATCCGTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIKILLV*WSSVVL
Trigger: TAAAACCACGGATGACCATCACACTAGCAGGATTTT...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCAATAGGATGTTACACTaGCCCATCTCCACAAGGGAA +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSNRMLH*PISTRE
Trigger: TTCCCTTGTGGAGATGGGTCAGTGTAACATCCTATT...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCTATAAACTTAAGAGCTaGTTTCTGTCACCCTCATCT +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCYKLKS*FLSPSS
Trigger: AGATGAGGGTGACAGAAATCAGCTCTTAAGTTTATA...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGATTGAATGTGCATGAATaGCCTGGGGACCTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRLNVHE*PGDLVQ
Trigger: TTGAACAAGGTCCCCAGGTCATTCATGCACATTCAA...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACTTTCTCACTCTAAAGTaGGGTGTTGGGGCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHFLTLK*GVGAVS
Trigger: AGACACTGCCCCAACACCTCACTTTAGAGTGAGAAA...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGAGGAGGGTACCTTGCTaGTGCCTAATCTGCAATGGG +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRRRVPC*CLICNG
Trigger: CCCATTGCAGATTAGGCATCAGCAAGGTACCCTCCT...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCTCAGGGGAGCAGTTaGTGGGTCACGGAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFESQGSS*WVTEGL
Trigger: CAAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGA...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACGCAGTGCACATCTGTTaGGCAAACTTTCGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNAVHIC*ANFRVR
Trigger: CCTAACACGAAAGTTTGCGCAACAGATGTGCACTGC...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGGTCAACTATCTTGATTaGACTGCGTTTGGGGTTACA +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALVNYLD*TAFGVT
Trigger: TGTAACCCCAAACGCAGTGCAATCAAGATAGTTGAC...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAGTCAACTATCTTGATTaGACTGCGTTTGGGGTTACA +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTVNYLD*TAFGVT
Trigger: TGTAACCCCAAACGCAGTGCAATCAAGATAGTTGAC...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTATGTACTGGAGGTGGTaGCCGAAGACTGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSMYWRW*PKTETA
Trigger: AGCAGTCTCAGTCTTCGGGCACCACCTCCAGTACAT...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTTTGGATGTCCAGCTATaGCAGTCTCTTGGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSLDVQL*QSLGGD
Trigger: ATCCCCGCCAAGAGACTGGCATAGCTGGACATCCAA...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCATTGGATGTCCAGCTATaGCAGTCTCTTGGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSLDVQL*QSLGGD
Trigger: ATCCCCGCCAAGAGACTGGCATAGCTGGACATCCAA...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACTCTCTATCAGCCCCTTaGCTCATTGTCAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNSLSAP*LIVRCP
Trigger: AGGACATCTGACAATGAGGCAAGGGGCTGATAGAGA...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGATCATGGGGCCCTTTATaGAAATTATGTGCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRSWGPL*KLCAVP
Trigger: AGGCACTGCACATAATTTGCATAAAGGGCCCCATGA...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGATCTTCCTTACAGTACTaGATTTCCGTGCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRSSLQY*ISVPKC
Trigger: ACACTTGGGCACGGAAATGCAGTACTGTAAGGAAGA...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGATCAGCATGCTTACTGTaGCTGACAAACTTCACCACA +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGSACLL*LTNFTT
Trigger: TGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGA...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGGTGGAGATACCACGTaGCGAGAAAAAGCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAEGGDTT*REKAKE
Trigger: TTCTTTTGCTTTTTCTCGGCACGTGGTATCTCCACC...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAATGAGAGTTCTGCTTTaGTTGCACTCATACTCTGGA +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTMRVLL*LHSYSG
Trigger: TCCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCAT...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTATGAGAGTTCTGCTTTaGTTGCACTCATACTCTGGA +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAMRVLL*LHSYSG
Trigger: TCCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCAT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCCACACACCCAGTGCCTaGCACTTTATTTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFHTPSA*HFILPL
Trigger: CAAGGGCAAAATAAAGTGGCAGGCACTGGGTGTGTG...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTACCACACACACCCAGTaGCTGCCACTTTATTTTGCC +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPTTHTQ*LPLYFA
Trigger: GGCAAAATAAAGTGGCAGGCACTGGGTGTGTGTGGT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCCAACTCAACACTTTCTaGTGGCCACACTCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFQLNTF*WPHSGS
Trigger: TGAGCCTGAGTGTGGCCAGCAGAAAGTGTTGAGTTG...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAATCCATTCTTTCAGATaGCTACCGGACATCTCCACA +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAEIHSFR*LPDIST
Trigger: TGTGGAGATGTCCGGTAGGCATCTGAAAGAATGGAT...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCAGCTACCATGTCATTaGACTTTGCTGCCTAATTCA +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALQLPCH*TLLPNS
Trigger: TGAATTAGGCAGCAAAGTGCAATGACATGGTAGCTG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAACAGTGCATGCCATCATaGCCGGCTAATTTTTGTACT +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAEQCMPS*PANFCT
Trigger: AGTACAAAAATTAGCCGGGCATGATGGCATGCACTG...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTCCGCCACCTAAGACTTaGCTTGGCTTCTCCTTTACC +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSPPPKT*LGFSFT
Trigger: GGTAAAGGAGAAGCCAAGGCAAGTCTTAGGTGGCGG...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAACTAGAATCGTCTCCCTaGCCCTGTTGGTGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKLESSP*PCWCLR
Trigger: GCGAAGACACCAACAGGGCCAGGGAGACGATTCTAG...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGGTTCCAAGTGCCATCTaGCAACTTCTCAAAGAACTT +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALVPSAI*QLLKEL
Trigger: AAGTTCTTTGAGAAGTTGCCAGATGGCACTTGGAAC...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGACGATGTACTGGAGGTaGTGCCCGAAGACTGAGACT +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLTMYWR*CPKTET
Trigger: AGTCTCAGTCTTCGGGCACCACCTCCAGTACATCGT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTAGCTTGACGATGTACTaGAGGTGGTGCCCGAAGACT +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSSLTMY*RWCPKT
Trigger: AGTCTTCGGGCACCACCTCCAGTACATCGTCAAGCT...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAATGTAGACCCTTGGCCTaGTCCGGTTACCCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKCRPLA*SGYPRL
Trigger: AAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTACA...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGAGAATTGTAGACCCTTaGCCTGGTCCGGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKRIVDP*PGPVTQ
Trigger: TTGGGTAACCGGACCAGGCCAAGGGTCTACAATTCT...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTAGAATTGTAGACCCTTaGCCTGGTCCGGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTRIVDP*PGPVTQ
Trigger: TTGGGTAACCGGACCAGGCCAAGGGTCTACAATTCT...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAACCTCCATAGAATCTTaGGTAGAGGAGCTATTCGTT +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTTSIES*VEELFV
Trigger: AACGAATAGCTCCTCTACCCAAGATTCTATGGAGGT...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTAAGACAGGGATGTCATaGAGTGGTGACTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTKTGMS*SGDCGQ
Trigger: TTGGCCACAGTCACCACTCCATGACATCCCTGTCTT...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTAAGACAGGGATGTCATaGAGTGGTGACTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPKTGMS*SGDCGQ
Trigger: TTGGCCACAGTCACCACTCCATGACATCCCTGTCTT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACCACAAACTCCTGTCATaGGGGACTCTTCTCTATCAG +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNHKLLS*GTLLYQ
Trigger: CTGATAGAGAAGAGTCCCCCATGACAGGAGTTTGTG...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAACTTGCACTCATACTCTaGACCTGTTGGTGCAATCAA +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAELALIL*TCWCNQ
Trigger: TTGATTGCACCAACAGGTCCAGAGTATGAGTGCAAG...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCAGGGGCAAACTCAATaGTCACTTGTGAGCCTAACA +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHQGQTQ*SLVSLT
Trigger: TGTTAGGCTCACAAGTGACCATTGAGTTTGCCCCTG...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCCTGCACACCAACCTaGGAGACAAAGCAAGACTGT +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRPCTPT*ETKQDC
Trigger: ACAGTCTTGCTTTGTCTCCCAGGTTGGTGTGCAGGG...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCTTCCATTCCCACTGTTaGGAAATAACATGTGCCATT +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFFHSHC*EITCAI
Trigger: AATGGCACATGTTATTTCCCAACAGTGGGAATGGAA...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CACTGCAATTTACATTGCACAGAGCGGCAGGGCAAAATGATGAGAATGCCACATGGATCTGAACCTCTTTaGGATTCTAGAGAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: HCNLHCTERQGKMMRMPHGSEPL*DSREGN
Trigger: GTTTCCCTCTCTAGAATCCCAAAGAGGTTCAGATCC...ATGTGGCATTCTCATCATTTTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTGTAACAGACTTTCCTTaGAGTGGGAGCAAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPVTDFP*SGSKGW
Trigger: CCACCCTTTGCTCCCACTCCAAGGAAAGTCTGTTAC...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAAGGAACTGTGGATCCTaGAAACAAGAAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAERNCGS*KQEGEK
Trigger: TTTCTCCCCTTCTTGTTTCCAGGATCCACAGTTCCT...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGAGCAAGAGGGGACTGTaGAAGCCACATGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFESKRGL*KPHGEA
Trigger: TGCTTCCCCATGTGGCTTCCACAGTCCCCTCTTGCT...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGAATCAGCTGTGTGCAGTaGCTCCTGCCCGTAATGGGA +
Preference number: 4 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRISCVQ*LLPVMG
Trigger: TCCCATTACGGGCAGGAGCCACTGCACACAGCTGAT...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACACAGTAGCACCAAAGTaGCCGTGGACAACTTGCAAA +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHTVAPK*PWTTCK
Trigger: TTTGCAAGTTGTCCACGGCCACTTTGGTGCTACTGT...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAGTGACTTTCCTTGCTTaGCTAACAAATGAGCCATCT +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTVTFLA*LTNEPS
Trigger: AGATGGCTCATTTGTTAGCCAAGCAAGGAAAGTCAC...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATATGTGGCAAATGTGTGTaGGAATGGAGCTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFICGKCV*EWSSSF
Trigger: AAAAGAAGAGCTCCATTCCCACACACATTTGCCACA...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAATCTGTCCAGCCATCTaGAGGCCAGCAGCATGGAAT +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKICPAI*RPAAWN
Trigger: ATTCCATGCTGCTGGCCTTCAGATGGCTGGACAGAT...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAGTCACTGTACTGATGTaGATGGGGCATCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKVTVLM*MGHLSS
Trigger: GCTGGACAGATGCCCCATTCACATCAGTACAGTGAC...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTCCGCCTCTGTAACATaGCAATATCAGGCATCACCT +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPSASVT*QYQASP
Trigger: AGGTGATGCCTGATATTGTCATGTTACAGAGGCGGA...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000644942.1
CDS-3UTR TCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCCGCCTCTGTAACATaGCAATATCAGGCATCACCT +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTSASVT*QYQASP
Trigger: AGGTGATGCCTGATATTGTCATGTTACAGAGGCGGA...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000644942.1
CDS-3UTR TCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTACTTCTATCTGTGCTTaGTTCAGAAAAGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAATSICA*FRKAFL
Trigger: CAAGAAGGCTTTTCTGAATCAAGCACAGATAGAAGT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCTGTCATGTTTGTTCATaGGCTCAAGAAGTCGCACTT +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSCHVCS*AQEVAL
Trigger: AAGTGCGACTTCTTGAGCTCATGAACAAACATGACA...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAATGTCATGTTTGTTCATaGGCTCAAGAAGTCGCACTT +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAECHVCS*AQEVAL
Trigger: AAGTGCGACTTCTTGAGCTCATGAACAAACATGACA...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGATGTCATGTTTGTTCATaGGCTCAAGAAGTCGCACTT +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRCHVCS*AQEVAL
Trigger: AAGTGCGACTTCTTGAGCTCATGAACAAACATGACA...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTATCCTCTGCCCCAACTaGCAAGAACTGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSILCPN*QELPKS
Trigger: TGACTTTGGCAGTTCTTGTCAGTTGGGGCAGAGGAT...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGATCCTCTGCCCCAACTaGCAAGAACTGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLILCPN*QELPKS
Trigger: TGACTTTGGCAGTTCTTGTCAGTTGGGGCAGAGGAT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGATCCTCTGCCCCAACTaGCAAGAACTGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRILCPN*QELPKS
Trigger: TGACTTTGGCAGTTCTTGTCAGTTGGGGCAGAGGAT...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAACCTCATTGGCACCACTaGACAGAGGTTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKPHWHH*TEVLQC
Trigger: ACACTGGAGAACCTCTGTTCAGTGGTGCCAATGAGG...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCACTATTTTATTCATCTaGTCTACCTCATTGGCACCA +
Preference number: 4 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFTILFI*STSLAP
Trigger: TGGTGCCAATGAGGTAGATCAGATGAATAAAATAGT...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGCTTGGTCAAGAATATaGGCAGGTGGAATACCCAGA +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFAWSRI*AGGIPR
Trigger: TCTGGGTATTCCACCTGCTCATATTCTTGACCAAGC...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTGCTTGGTCAAGAATATaGGCAGGTGGAATACCCAGA +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTAWSRI*AGGIPR
Trigger: TCTGGGTATTCCACCTGCTCATATTCTTGACCAAGC...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTGCTTGGTCAAGAATATaGGCAGGTGGAATACCCAGA +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPAWSRI*AGGIPR
Trigger: TCTGGGTATTCCACCTGCTCATATTCTTGACCAAGC...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGGCTTGGTCAAGAATATaGGCAGGTGGAATACCCAGA +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKAWSRI*AGGIPR
Trigger: TCTGGGTATTCCACCTGCTCATATTCTTGACCAAGC...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAACTCCAAGAATGTTATaGAGTTTACGGGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGTPRML*SLRVPG
Trigger: ACCAGGAACCCGTAAACTTCATAACATTCTTGGAGT...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTCCTCTGAGCTATCCATaGAGATGGGTTTGGACATGG +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSPLSYP*RWVWTW
Trigger: CCATGTCCAAACCCATCTTCATGGATAGCTCAGAGG...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACAAAAGAGGATACCTCTaGGCTATCCATGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHKRGYL*AIHEDG
Trigger: CCCATCTTCATGGATAGCTCAGAGGTATCCTCTTTT...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCATGACACACGCAAAGTaGCCTTGCAATACCTTACAA +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSMTHAK*PCNTLQ
Trigger: TTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCAT...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAAGGAAGTCAACTTTATaGCACACGCAAAGTGACCTT +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAERKSTL*HTQSDL
Trigger: AAGGTCACTTTGCGTGTGTCATAAAGTTGACTTCCT...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACAGGAAGTCAACTTTATaGCACACGCAAAGTGACCTT +
Preference number: 4 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDRKSTL*HTQSDL
Trigger: AAGGTCACTTTGCGTGTGTCATAAAGTTGACTTCCT...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTAAACCACTACTTCTGTaGCCTTCAACCAATAAGGAA +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAKPLLL*PSTNKE
Trigger: TTCCTTATTGGTTGAAGGTCACAGAAGTAGTGGTTT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGTTACCTTCAGAAGCCTaGACACACTTAGAATGTAAC +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALLPSEA*THLECN
Trigger: GTTACATTCTAAGTGTGTTCAGGCTTCTGAAGGTAA...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTTGCTCAGGTCACGCATaGGAGTTCTGCTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSCSGHA*EFCFAC
Trigger: GCAAGCAAAGCAGAACTCTCATGCGTGACCTGAGCA...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTCTTGGCGGGGATTGGAGTAGACGGTCAAATTAACGTCCATAGCTCCATTCTGCATTTAACTCAACTTTaGTACTATACCTACCAGACC +
Preference number: 4 (lower is better)
Translates to: LLAGIGVDGQINVHSSILHLTQL*YYTYQT
Trigger: GGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATG...CAGAATGGAGCTATGGACGTTAATTTGACCGTCTACTCCAATCCCCGCCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR TCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATAACTTTCAGAGATTGCTaGTGCCTATGTCAATGTATC +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFITFRDC*CLCQCI
Trigger: GATACATTGACATAGGCATCAGCAATCTCTGAAAGT...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTAGGGAAGGAAGAATaGGTATTCGTATTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAALGKEE*VFVFLP
Trigger: AGGAAGGAATACGAATACTCATTCTTCCTTCCCTAA...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCAAAGAAACCAGGGTTATaGAAATCAGAACTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPKKPGL*KSELLL
Trigger: GAGGAGAAGTTCTGATTTTCATAACCCTGGTTTCTT...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGTGTTTAAGGCTGCAGTaGGCTGCAATCACACCACCA +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLCLRLQ*AAITPP
Trigger: TGGTGGTGTGATTGCAGCTCACTGCAGCCTTAAACA...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCAGGCACGAGAATCGCTTaGATCTGGGAAATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSGTRIA*IWEMEV
Trigger: AACCTCCATTTCCCAGATTCAAGCGATTCTCGTGCC...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTGGCACGAGAATCGCTTaGATCTGGGAAATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSGTRIA*IWEMEV
Trigger: AACCTCCATTTCCCAGATTCAAGCGATTCTCGTGCC...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCATTCTCATGGGACATCTaGGAGCTATTAATGAATAGG +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPFSWDI*ELLMNR
Trigger: CCTATTCATTAATAGCTCTCAGATGTCCCATGAGAA...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCACGGACATTACCTCACTaGGGCATGCACAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISRTLPH*GMHSIS
Trigger: GGAGATGCTGTGCATGCCTCAGTGAGGTAATGTCCG...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACTTGAATGTGCATGAATaGCCTGGGGACCTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHLNVHE*PGDLVQ
Trigger: TTGAACAAGGTCCCCAGGTCATTCATGCACATTCAA...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTGACTTTGAATGTGCATaGATGACCTGGGGACCTTGT +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTDFECA*MTWGPC
Trigger: ACAAGGTCCCCAGGTCATTCATGCACATTCAAAGTC...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTCAGGGACCATCCAGCTaGAGGTCTTGGTATGTGATC +
Preference number: 4 (lower is better)
Translates to: EVILVSQLNETIVGEKPVQGPSS*RSWYVI
Trigger: GATCACATACCAAGACCTTCAGCTGGATGGTCCCTG...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGACAGGGACCATCCAGCTaGAGGTCTTGGTATGTGATC +
Preference number: 4 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRQGPSS*RSWYVI
Trigger: GATCACATACCAAGACCTTCAGCTGGATGGTCCCTG...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGAGCAGGAAAGCAGGTTaGTGCTTCAGGGAGACAAAA +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKSRKAG*CFRETK
Trigger: TTTTGTCTCCCTGAAGCATCAACCTGCTTTCCTGCT...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTAGGAGGGTACCTTGCTaGTGCCTAATCTGCAATGGG +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSRRVPC*CLICNG
Trigger: CCCATTGCAGATTAGGCATCAGCAAGGTACCCTCCT...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACCAAGTTTACTTTCTCTaGGCATGTTTCTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDQVYFL*ACFFSC
Trigger: GCAGCTGAAGAAACATGCTCAGAGAAAGTAAACTTG...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTACTAATGTCAACTCTTTaGGCAACTGTTGTCGTGGAA +
Preference number: 4 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLLMSTL*ATVVVE
Trigger: TTCCACGACAACAGTTGCTCAAAGAGTTGACATTAG...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGATGAGCCGCCACACCTaGCCAGTTTTCTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFEMSRHT*PVFSAL
Trigger: CAAAGCTGAGAAAACTGGTCAGGTGTGGCGGCTCAT...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATATTTTCTATTCCACACTaGTATGAGTTAGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIFSIPH*YELAVS
Trigger: GGACACAGCTAACTCATATCAGTGTGGAATAGAAAA...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTTTCCTAAATTTCACATaGTGTCATCCCAATCATCCT +
Preference number: 4 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSFLNFT*CHPNHP
Trigger: AGGATGATTGGGATGACATCATGTGAAATTTAGGAA...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS-3UTR GCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACGAACAGATGAAGGTTTaGATGCTGAAGTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNEQMKV*MLKSLL
Trigger: GAGGAGAGACTTCAGCATGCAAACCTTCATCTGTTC...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGGTCCAAAGGAACCTTTaGCTATCAAGGAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALVQRNL*LSRSQF
Trigger: AAATTGACTCCTTGATAGGCAAAGGTTCCTTTGGAC...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGACTCCACACGATCATATaGCTTTACAACCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGLHTII*LYNLSK
Trigger: TTTGGACAGGTTGTAAAGGCATATGATCGTGTGGAG...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGTCGCACTTCTATCTGTaGTTGATTCAGAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALSHFYL*LIQKSL
Trigger: AAGGCTTTTCTGAATCAAGCACAGATAGAAGTGCGA...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAACGCAAGGAAAAGCAGTaGAGTGCACATCTGTTGCGC +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKRKEKQ*SAHLLR
Trigger: GCGCAACAGATGTGCACTGCACTGCTTTTCCTTGCG...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTCGCAAGGAAAAGCAGTaGAGTGCACATCTGTTGCGC +
Preference number: 4 (lower is better)
Translates to: EVILVSQLNETIVGEKPVRKEKQ*SAHLLR
Trigger: GCGCAACAGATGTGCACTGCACTGCTTTTCCTTGCG...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTCAAAGAACTTTCTTaGTTTTGGTGCTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTLKELS*FWCLVK
Trigger: CTTGACCAAGCACCAAAAGCAAGAAAGTTCTTTGAG...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTCTTTAAGTTCCAAGTaGCATCTGGCAACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAASLSSK*HLATSQ
Trigger: TTGAGAAGTTGCCAGATGGCACTTGGAACTTAAAGA...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGTCTTTAAGTTCCAAGTaGCATCTGGCAACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALSLSSK*HLATSQ
Trigger: TTGAGAAGTTGCCAGATGGCACTTGGAACTTAAAGA...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAATGTACTGGAGGTGGTaGCCGAAGACTGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKMYWRW*PKTETA
Trigger: AGCAGTCTCAGTCTTCGGGCACCACCTCCAGTACAT...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCATTCAGTCATGTAATGTaGAGGACCTGTATTAGCAGA +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPFSHVM*RTCISR
Trigger: TCTGCTAATACAGGTCCTGCACATTACATGACTGAA...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCTCTATCAGCCCCTTaGCTCATTGTCAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTSLSAP*LIVRCP
Trigger: AGGACATCTGACAATGAGGCAAGGGGCTGATAGAGA...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGTCTCTATCAGCCCCTTaGCTCATTGTCAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKSLSAP*LIVRCP
Trigger: AGGACATCTGACAATGAGGCAAGGGGCTGATAGAGA...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACTCATGGGGCCCTTTATaGAAATTATGTGCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNSWGPL*KLCAVP
Trigger: AGGCACTGCACATAATTTGCATAAAGGGCCCCATGA...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACAGTACTGCATTTCCGTaGCCAAGTGTGTTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHSTAFP*PSVFRG
Trigger: TCCTCTAAACACACTTGGGCACGGAAATGCAGTACT...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATAAGCCCAATATCCATGTaGCTAGGTAAAATTCTCACA +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFISPISM*LGKILT
Trigger: TGTGAGAATTTTACCTAGGCACATGGATATTGGGCT...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTCTGAACCTGCATTCTaGGACTATCAAAATAAAGGC +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAASEPAF*DYQNKG
Trigger: GCCTTTATTTTGATAGTCGCAGAATGCAGGTTCAGA...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCTGGGACCTTGGCTATaGATAATGCCAAAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLLGPWL*IMPKRA
Trigger: GGCTCTCTTTGGCATTATGCATAGCCAAGGTCCCAG...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGACCACACACACCCAGTaGCTGCCACTTTATTTTGCC +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLTTHTQ*LPLYFA
Trigger: GGCAAAATAAAGTGGCAGGCACTGGGTGTGTGTGGT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCAACTCAACACTTTCTaGTGGCCACACTCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRQLNTF*WPHSGS
Trigger: TGAGCCTGAGTGTGGCCAGCAGAAAGTGTTGAGTTG...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGTTTCTTTCCTGGATTTaGGGGCAATGGAAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKFLSWI*GQWKWE
Trigger: CTCCCACTTCCATTGCCCGCAAATCCAGGAAAGAAA...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTCCCTTCGCCATCAGTTaGCTATATGAGAATGACCAG +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFPFAIS*LYENDQ
Trigger: CTGGTCATTCTCATATAGGCAACTGATGGCGAAGGG...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGCCGCCACCTAAGACTTaGCTTGGCTTCTCCTTTACC +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFEPPPKT*LGFSFT
Trigger: GGTAAAGGAGAAGCCAAGGCAAGTCTTAGGTGGCGG...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTTTGGTCACTTATGTTTaGCTGGCGACGGTCACTGTA +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFLVTYV*LATVTV
Trigger: TACAGTGACCGTCGCCAGCCAAACATAAGTGACCAA...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATAAATGATACTAAGTTCTaGAGTCGCAAGGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFINDTKF*SRKEKQ
Trigger: CTGCTTTTCCTTGCGACTCCAGAACTTAGTATCATT...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACGGGACCACATATCAATaGCAAGGTCATAAGGCATTC +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHGTTYQ*QGHKAF
Trigger: GAATGCCTTATGACCTTGCCATTGATATGTGGTCCC...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGAAAGAATATGAGCAGGTaGAATACCCAGAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRKNMSR*NTQNFH
Trigger: GTGGAAGTTCTGGGTATTCCACCTGCTCATATTCTT...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTTTTACGGGTTCCTGGTaGTTTGTACTCCCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFFTGSW*FVLPFS
Trigger: GGAAAACGGGAGTACAAACCACCAGGAACCCGTAAA...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
44% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTTTACGGGTTCCTGGTaGTTTGTACTCCCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTFTGSW*FVLPFS
Trigger: GGAAAACGGGAGTACAAACCACCAGGAACCCGTAAA...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGTTTACGGGTTCCTGGTaGTTTGTACTCCCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKFTGSW*FVLPFS
Trigger: GGAAAACGGGAGTACAAACCACCAGGAACCCGTAAA...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAGTTGAATTCGAGTTTTaGGGTCATAATCAAGCATCC +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTVEFEF*GHNQAS
Trigger: GGATGCTTGATTATGACCCCAAAACTCGAATTCAAC...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCATGTAGACCCTTGGCCTaGTCCGGTTACCCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISCRPLA*SGYPRL
Trigger: AAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTACA...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACAGAGGAGCTATTCGTTaGAGAATTGTAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNRGAIR*RIVDPW
Trigger: CCAAGGGTCTACAATTCTCCAACGAATAGCTCCTCT...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCACTGTGACTGGGATGTaGCAAGTTAAAATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFTVTGM*QVKMGE
Trigger: CTCCCCCATTTTAACTTGCCACATCCCAGTCACAGT...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTACTGTGACTGGGATGTaGCAAGTTAAAATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTTVTGM*QVKMGE
Trigger: CTCCCCCATTTTAACTTGCCACATCCCAGTCACAGT...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGGGTGTTTGTGGAAGCTaGAGGTCCCTCTTCCTTACA +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRGVCGS*RSLFLT
Trigger: TGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACC...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCACTTCTCAGTGCACCTTaGTTAGGAGACCAGTCACGT +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSLLSAP*LGDQSR
Trigger: ACGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAG...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACCTTGCACTCATACTCTaGACCTGTTGGTGCAATCAA +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNLALIL*TCWCNQ
Trigger: TTGATTGCACCAACAGGTCCAGAGTATGAGTGCAAG...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAACTGCAGTTTCAGATATaGAATTCAGGGGCAAGTACA +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAELQFQI*NSGAST
Trigger: TGTACTTGCCCCTGAATTCCATATCTGAAACTGCAG...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGACTGCAGTTTCAGATATaGAATTCAGGGGCAAGTACA +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGLQFQI*NSGAST
Trigger: TGTACTTGCCCCTGAATTCCATATCTGAAACTGCAG...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAGCCCGTCCTCTTGCCTaGGTGTTCATTAACAACTCC +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKARPLA*VFINNS
Trigger: GGAGTTGTTAATGAACACCCAGGCAAGAGGACGGGC...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTCTCAACACTTTCTGCTaGCCACACTCAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTALNTFC*PHSGSG
Trigger: GCCTGAGCCTGAGTGTGGCCAGCAGAAAGTGTTGAG...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCATGGATTTGCGGGCAATaGAAGTGGGAGTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISWICGQ*KWEWCL
Trigger: CAGGCACCACTCCCACTTCCATTGCCCGCAAATCCA...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCAAAGACCTGGAGCTGCTaGGAAGCACAAAAGCTCATC +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSKTWSC*EAQKLI
Trigger: GATGAGCTTTTGTGCTTCCCAGCAGCTCCAGGTCTT...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAAAACCACCACTCAATTaGAATACAGTAGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAEKPPLN*NTVAVL
Trigger: CAGGACTGCTACTGTATTCCAATTGAGTGGTGGTTT...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAACTTCACAGCCTCTCTaGATTAGAATAAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAETSQPL*IRIRSL
Trigger: CAGAGACCTTATTCTAATCCAGAGAGGCTGTGAAGT...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCAAGAATGACCAGAAATTaGCCATTCCCAGGCCCGACT +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSRMTRN*PFPGPT
Trigger: AGTCGGGCCTGGGAATGGCCAATTTCTGGTCATTCT...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGATGGGCAGCAAGGGGCTaGACAATCTTCTATCCCTTG +
Preference number: 4 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRWAARG*TIFYPL
Trigger: CAAGGGATAGAAGATTGTCCAGCCCCTTGCTGCCCA...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACAGGAACTGTGGATCCTaGAAACAAGAAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNRNCGS*KQEGEK
Trigger: TTTCTCCCCTTCTTGTTTCCAGGATCCACAGTTCCT...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTCTTTGTTCAGGGTCCTaGAGAGCCTCCCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSLCSGS*RASQLL
Trigger: AAGAAGCTGGGAGGCTCTCCAGGACCCTGAACAAAG...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTGTAGTTTCACCATGTTaGCCAGGCAGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPVVSPC*PGRSQT
Trigger: AGTTTGAGACCTGCCTGGCCAACATGGTGAAACTAC...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGAGCCTCCTGAGTAGCTaGAATTACCAGTGCATGCCA +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRSLLSS*NYQCMP
Trigger: TGGCATGCACTGGTAATTCCAGCTACTCAGGAGGCT...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATTCCAAGAGATGTTCCTaGTCAAGGGCACTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNSKRCS*SRALGP
Trigger: CGGCCCCAGTGCCCTTGACCAGGAACATCTCTTGGA...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS-3UTR CCA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCTCCACTGATAACTCATaGTTGACCAGAAAAATTCAT +
Preference number: 4 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCSTDNS*LTRKIH
Trigger: ATGAATTTTTCTGGTCAACCATGAGTTATCAGTGGA...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS-3UTR TCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAGTCACTGTACTGATGTaGATGGGGCATCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISVTVLM*MGHLSS
Trigger: GCTGGACAGATGCCCCATTCACATCAGTACAGTGAC...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTCGACGGTCACTGTACTaGTGTGAATGGGGCATCTGT +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTARRSLY*CEWGIC
Trigger: ACAGATGCCCCATTCACATCAGTACAGTGACCGTCG...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGTTAGTTAGAGGTTGCTaGATCTGGTCAGAATATGAT +
Preference number: 4 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALLVRGC*IWSEYD
Trigger: ATCATATTCTGACCAGATTCAGCAACCTCTAACTAA...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTAACTTCTATCTGTGCTTaGTTCAGAAAAGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLTSICA*FRKAFL
Trigger: CAAGAAGGCTTTTCTGAATCAAGCACAGATAGAAGT...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTGGTTTTAGATCACAGTaGATGATACTAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAGFRSQ*MILSSG
Trigger: TCCAGAACTTAGTATCATTCACTGTGATCTAAAACC...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCAGGTTTTAGATCACAGTaGATGATACTAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPGFRSQ*MILSSG
Trigger: TCCAGAACTTAGTATCATTCACTGTGATCTAAAACC...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATAGGTTTTAGATCACAGTaGATGATACTAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIGFRSQ*MILSSG
Trigger: TCCAGAACTTAGTATCATTCACTGTGATCTAAAACC...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCCAAAGTCAACTATCTTaGTTGCACTGCGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFQSQLS*LHCVWG
Trigger: ACCCCAAACGCAGTGCAATCAAGATAGTTGACTTTG...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTCAAAGTCAACTATCTTaGTTGCACTGCGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTQSQLS*LHCVWG
Trigger: ACCCCAAACGCAGTGCAATCAAGATAGTTGACTTTG...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTCAAAGTCAACTATCTTaGTTGCACTGCGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFQSQLS*LHCVWG
Trigger: ACCCCAAACGCAGTGCAATCAAGATAGTTGACTTTG...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTCCAAGAATGTTATaGAGTTTACGGGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNTPRML*SLRVPG
Trigger: ACCAGGAACCCGTAAACTTCATAACATTCTTGGAGT...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTCATCAGCTGTTTTCTTaGAGAAACTGTGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFHQLFS*RNCAAE
Trigger: CTCTGCAGCACAGTTTCTTCAAGAAAACAGCTGATG...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTCATCAGCTGTTTTCTTaGAGAAACTGTGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTHQLFS*RNCAAE
Trigger: CTCTGCAGCACAGTTTCTTCAAGAAAACAGCTGATG...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTGTGTTAATCTCCTCCTaGTTCAAGCAGCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPVLISS*FKQLCT
Trigger: AGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACAC...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTGTGTTAATCTCCTCCTaGTTCAAGCAGCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTVLISS*FKQLCT
Trigger: AGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACAC...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGCCTCTGAGCTATCCATaGAGATGGGTTTGGACATGG +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFEPLSYP*RWVWTW
Trigger: CCATGTCCAAACCCATCTTCATGGATAGCTCAGAGG...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTAAAAGAGGATACCTCTaGGCTATCCATGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPKRGYL*AIHEDG
Trigger: CCCATCTTCATGGATAGCTCAGAGGTATCCTCTTTT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTAAATTAGTTGGCAAATaGCCAAGACCAACATCTGAA +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAKLVGK*PRPTSE
Trigger: TTCAGATGTTGGTCTTGGTCATTTGCCAACTAATTT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAAAATTAGTTGGCAAATaGCCAAGACCAACATCTGAA +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTKLVGK*PRPTSE
Trigger: TTCAGATGTTGGTCTTGGTCATTTGCCAACTAATTT...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTCATGCTTACTGTGCCTaGCAAACTTCACCACAACCG +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSHAYCA*QTSPQP
Trigger: CGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATG...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGCATGCTTACTGTGCCTaGCAAACTTCACCACAACCG +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFEHAYCA*QTSPQP
Trigger: CGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATG...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CACACAAGAAACAAACTCAAGTTTCAATGTAGTCACGAGCTAGCTACAGGACTCAACGCGGTGTTCTGCTaGGTCATCTTAAACAGGTTA +
Preference number: 4 (lower is better)
Translates to: HTRNKLKFQCSHELATGLNAVFC*VILNRL
Trigger: TAACCTGTTTAAGATGACTCAGCAGAACACCGCGTT...GAGTCCTGTAGCTAGCTCGTGACTACATTGAAACTTGAGTTTGTTTCTTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR TCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCTTAGGGAAGGAAGAATaGGTATTCGTATTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSLGKEE*VFVFLP
Trigger: AGGAAGGAATACGAATACTCATTCTTCCTTCCCTAA...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCAGTCATGTATTTGGAATaGACCATCTGGTCTATTACA +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPVMYLE*TIWSIT
Trigger: TGTAATAGACCAGATGGTTCATTCCAAATACATGAC...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGAAACACACCAAGCGATaGGCCACTTACCTCAATGAA +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKKHTKR*ATYLNE
Trigger: TTCATTGAGGTAAGTGGCTCATCGCTTGGTGTGTTT...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCACTCTGTCCTGCATCATaGACTTTTGCCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSLCPAS*TFATTL
Trigger: CAAAGTGGTGGCAAAAGTTCATGATGCAGGACAGAG...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAACAGGGGCAAGTACACTaGCTAATGAATGAGTATATA +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAEQGQVH*LMNEYI
Trigger: TATATACTCATTCATTAGTCAGTGTACTTGCCCCTG...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCAATAGGATGTTACACTaGCCCATCTCCACAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFNRMLH*PISTRE
Trigger: TTCCCTTGTGGAGATGGGTCAGTGTAACATCCTATT...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAATTCTCATGGGACATCTaGGAGCTATTAATGAATAGG +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAEFSWDI*ELLMNR
Trigger: CCTATTCATTAATAGCTCTCAGATGTCCCATGAGAA...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATCGGACATTACCTCACTaGGGCATGCACAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNRTLPH*GMHSIS
Trigger: GGAGATGCTGTGCATGCCTCAGTGAGGTAATGTCCG...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCACTTATCTACCTGAAGTaGACAGTTAAATCCCATGAT +
Preference number: 4 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPLIYLK*TVKSHD
Trigger: ATCATGGGATTTAACTGTTCACTTCAGGTAGATAAG...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCATGCATCACTCAGACTTaGTTCTTCAGAGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSCITQT*FFRASW
Trigger: CCAGGAAGCTCTGAAGAATCAAGTCTGAGTGATGCA...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTACATTCAAAATGCTGCTaGGTTATAACTGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLHSKCC*VITVSL
Trigger: CAGTGACACAGTTATAACTCAGCAGCATTTTGAATG...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGGTCTCTCCTCCTGTATaGATCGTCTTCTTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKVSPPV*IVFFQV
Trigger: GACTTGAAAGAAGACGATGCATACAGGAGGAGAGAC...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTGTCTCTCCTCCTGTATaGATCGTCTTCTTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTVSPPV*IVFFQV
Trigger: GACTTGAAAGAAGACGATGCATACAGGAGGAGAGAC...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGAACAGATGAAGGTTTaGATGCTGAAGTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFEQMKV*MLKSLL
Trigger: GAGGAGAGACTTCAGCATGCAAACCTTCATCTGTTC...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTGAACAGATGAAGGTTTaGATGCTGAAGTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPEQMKV*MLKSLL
Trigger: GAGGAGAGACTTCAGCATGCAAACCTTCATCTGTTC...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACGTCCAAAGGAACCTTTaGCTATCAAGGAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDVQRNL*LSRSQF
Trigger: AAATTGACTCCTTGATAGGCAAAGGTTCCTTTGGAC...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCTCGCACTTCTATCTGTaGTTGATTCAGAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSSHFYL*LIQKSL
Trigger: AAGGCTTTTCTGAATCAAGCACAGATAGAAGTGCGA...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACGTCAACTATCTTGATTaGACTGCGTTTGGGGTTACA +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNVNYLD*TAFGVT
Trigger: TGTAACCCCAAACGCAGTGCAATCAAGATAGTTGAC...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGACTCAAAGAACTTTCTTaGTTTTGGTGCTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGLKELS*FWCLVK
Trigger: CTTGACCAAGCACCAAAAGCAAGAAAGTTCTTTGAG...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGATCTTTAAGTTCCAAGTaGCATCTGGCAACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGSLSSK*HLATSQ
Trigger: TTGAGAAGTTGCCAGATGGCACTTGGAACTTAAAGA...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAATTCAGTCATGTAATGTaGAGGACCTGTATTAGCAGA +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAEFSHVM*RTCISR
Trigger: TCTGCTAATACAGGTCCTGCACATTACATGACTGAA...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTATTCAGTCATGTAATGTaGAGGACCTGTATTAGCAGA +
Preference number: 4 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLFSHVM*RTCISR
Trigger: TCTGCTAATACAGGTCCTGCACATTACATGACTGAA...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTTCTCTATCAGCCCCTTaGCTCATTGTCAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSSLSAP*LIVRCP
Trigger: AGGACATCTGACAATGAGGCAAGGGGCTGATAGAGA...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTTCATGGGGCCCTTTATaGAAATTATGTGCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFSWGPL*KLCAVP
Trigger: AGGCACTGCACATAATTTGCATAAAGGGCCCCATGA...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTAGTACTGCATTTCCGTaGCCAAGTGTGTTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTSTAFP*PSVFRG
Trigger: TCCTCTAAACACACTTGGGCACGGAAATGCAGTACT...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTCTTCCTTACAGTACTaGATTTCCGTGCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPSSLQY*ISVPKC
Trigger: ACACTTGGGCACGGAAATGCAGTACTGTAAGGAAGA...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CACACAAGAAACAAACTCAAGTTTCAATGTAGTCACGAGCTAGCTACAGGACTCTCAGCATGCTTACTGTaGCTGACAAACTTCACCACA +
Preference number: 4 (lower is better)
Translates to: HTRNKLKFQCSHELATGLSACLL*LTNFTT
Trigger: TGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGA...GAGTCCTGTAGCTAGCTCGTGACTACATTGAAACTTGAGTTTGTTTCTTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR GCA 90 bp CACACAAGAAACAAACTCAAGTTTCAATGTAGTCACGAGCTAGCTACAGGACTCTTGATTGCTTCTCAGTaGACCTTGGTTAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: HTRNKLKFQCSHELATGLLIASQ*TLVRRP
Trigger: TGGTCTCCTAACCAAGGTGCACTGAGAAGCAATCAA...GAGTCCTGTAGCTAGCTCGTGACTACATTGAAACTTGAGTTTGTTTCTTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR GCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTTTGATTGCTTCTCAGTaGACCTTGGTTAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFLIASQ*TLVRRP
Trigger: TGGTCTCCTAACCAAGGTGCACTGAGAAGCAATCAA...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGCATTAAGGACTGTCTaGAAAAGCATGTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAEALRTV*KSMSKS
Trigger: ACTTTTGGACATGCTTTTGCAGACAGTCCTTAATGC...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCACTCTGGACCTGTTGGTaGAATCAAGGTCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSLWTCW*NQGLAF
Trigger: GAAAGCAAGACCTTGATTGCACCAACAGGTCCAGAG...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACATGAGAGTTCTGCTTTaGTTGCACTCATACTCTGGA +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHMRVLL*LHSYSG
Trigger: TCCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCAT...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGAGCAGAGGTAGATTACTaGTTCTTTTCTAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRAEVDY*FFSRLL
Trigger: AAGAAGCCTAGAAAAGAAGCAGTAATCTACCTCTGC...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAAAGGCTGCAGTGAGCTaGAATCACACCACCAAACTC +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKKAAVS*NHTTKL
Trigger: GAGTTTGGTGGTGTGATTGCAGCTCACTGCAGCCTT...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTTTCTTGCCAGAGTCCTaGCTGGCTGCAGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAFLPES*LAAGSE
Trigger: TTCTGAACCTGCAGCCAGGCAGGACTCTGGCAAGAA...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGACATCTGGCAATTTCTaGCTTTCCCGGAGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLTSGNF*LSRRLV
Trigger: AACAAGCCTCCGGGAAAGGCAGAAATTGCCAGATGT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAATTGGGAAATAACATGTaGCATTCTCATGGGACATCT +
Preference number: 4 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAELGNNM*HSHGTS
Trigger: AGATGTCCCATGAGAATGGCACATGTTATTTCCCAA...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTCTGCACACACTCTCTTaGTTGCCGCCACCTAAGACT +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTALHTLS*LPPPKT
Trigger: AGTCTTAGGTGGCGGCAAGCAAGAGAGTGTGTGCAG...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CACACAAGAAACAAACTCAAGTTTCAATGTAGTCACGAGCTAGCTACAGGACTCAAGGCAGAAACCTGTTaGTCACTTATGTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HTRNKLKFQCSHELATGLKAETC*SLMFGW
Trigger: CCAGCCAAACATAAGTGACCAACAGGTTTCTGCCTT...GAGTCCTGTAGCTAGCTCGTGACTACATTGAAACTTGAGTTTGTTTCTTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAAATGATACTAAGTTCTaGAGTCGCAAGGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGNDTKF*SRKEKQ
Trigger: CTGCTTTTCCTTGCGACTCCAGAACTTAGTATCATT...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTGGGACCACATATCAATaGCAAGGTCATAAGGCATTC +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPGTTYQ*QGHKAF
Trigger: GAATGCCTTATGACCTTGCCATTGATATGTGGTCCC...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTTTTACGGGTTCCTGGTaGTTTGTACTCCCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSFTGSW*FVLPFS
Trigger: GGAAAACGGGAGTACAAACCACCAGGAACCCGTAAA...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTAAGTTTACGGGTTCCTaGTGGTTTGTACTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFKFTGS*WFVLPF
Trigger: AAACGGGAGTACAAACCACCAGGAACCCGTAAACTT...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGAAGTTTACGGGTTCCTaGTGGTTTGTACTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKKFTGS*WFVLPF
Trigger: AAACGGGAGTACAAACCACCAGGAACCCGTAAACTT...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAAGCTTGACGATGTACTaGAGGTGGTGCCCGAAGACT +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISSLTMY*RWCPKT
Trigger: AGTCTTCGGGCACCACCTCCAGTACATCGTCAAGCT...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAAGAATTGTAGACCCTTaGCCTGGTCCGGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKRIVDP*PGPVTQ
Trigger: TTGGGTAACCGGACCAGGCCAAGGGTCTACAATTCT...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTAGAGGAGCTATTCGTTaGAGAATTGTAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFRGAIR*RIVDPW
Trigger: CCAAGGGTCTACAATTCTCCAACGAATAGCTCCTCT...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGAGAGGAGCTATTCGTTaGAGAATTGTAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKRGAIR*RIVDPW
Trigger: CCAAGGGTCTACAATTCTCCAACGAATAGCTCCTCT...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTCACAAACTCCTGTCATaGGGGACTCTTCTCTATCAG +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSHKLLS*GTLLYQ
Trigger: CTGATAGAGAAGAGTCCCCCATGACAGGAGTTTGTG...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCACAAACTCCTGTCATaGGGGACTCTTCTCTATCAG +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLHKLLS*GTLLYQ
Trigger: CTGATAGAGAAGAGTCCCCCATGACAGGAGTTTGTG...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGACTGTGACTGGGATGTaGCAAGTTAAAATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLTVTGM*QVKMGE
Trigger: CTCCCCCATTTTAACTTGCCACATCCCAGTCACAGT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGAGGTGTTTGTGGAAGCTaGAGGTCCCTCTTCCTTACA +
Preference number: 4 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRGVCGS*RSLFLT
Trigger: TGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACC...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGCTTCTCAGTGCACCTTaGTTAGGAGACCAGTCACGT +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFELLSAP*LGDQSR
Trigger: ACGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAG...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTCTTCTCAGTGCACCTTaGTTAGGAGACCAGTCACGT +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSLLSAP*LGDQSR
Trigger: ACGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAG...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGGTGCAGAAGAAATGGTaGAGATACCACGTGCCGAGA +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFEVQKKW*RYHVPR
Trigger: TCTCGGCACGTGGTATCTCCACCATTTCTTCTGCAC...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATAGAACTGCTACATTATTaGTTACAGACATCTATGTGC +
Preference number: 4 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIELLHY*LQTSMC
Trigger: GCACATAGATGTCTGTAACCAATAATGTAGCAGTTC...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGTGGTTCCATAGCTTCTaGATCCAGTGTCCCTTTACC +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRWFHSF*IQCPFT
Trigger: GGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTATACTCTGGACCTGTTaGTGCAATCAAGGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTILWTC*CNQGLA
Trigger: AGCAAGACCTTGATTGCACCAACAGGTCCAGAGTAT...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTATACTCTGGACCTGTTaGTGCAATCAAGGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPILWTC*CNQGLA
Trigger: AGCAAGACCTTGATTGCACCAACAGGTCCAGAGTAT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGCTTGCACTCATACTCTaGACCTGTTGGTGCAATCAA +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKLALIL*TCWCNQ
Trigger: TTGATTGCACCAACAGGTCCAGAGTATGAGTGCAAG...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTACCAAGTCATGTATTTaGAATGAACCATCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAATKSCI*NEPSGL
Trigger: TAGACCAGATGGTTCATTCCAAATACATGACTTGGT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATCCATGCGAACAGAGCTaGGCTCCACTTGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNPCEQS*APLVLS
Trigger: GGACAAGACAAGTGGAGCCCAGCTCTGTTCGCATGG...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTGCCCGTCCTCTTGCCTaGGTGTTCATTAACAACTCC +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAARPLA*VFINNS
Trigger: GGAGTTGTTAATGAACACCCAGGCAAGAGGACGGGC...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CACTGCAATTTACATTGCACAGAGCGGCAGGGCAAAATGATGAGAATGCCACATCTGTCCAACAGTGAGTaGATGATGATTCCAAATTCA +
Preference number: 4 (lower is better)
Translates to: HCNLHCTERQGKMMRMPHLSNSE*MMIPNS
Trigger: TGAATTTGGAATCATCATCCACTCACTGTTGGACAG...ATGTGGCATTCTCATCATTTTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTATATACTTACATCTaGCAATTTCTGCCTTTCCCG +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAALYTYI*QFLPFP
Trigger: CGGGAAAGGCAGAAATTGCCAGATGTAAGTATATAA...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTTCCAGTGGTCTGGGCTaGGGCCTGAGATTTTGCATT +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTASSGLG*GLRFCI
Trigger: AATGCAAAATCTCAGGCCCCAGCCCAGACCACTGGA...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTGTAGTTTCACCATGTTaGCCAGGCAGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSVVSPC*PGRSQT
Trigger: AGTTTGAGACCTGCCTGGCCAACATGGTGAAACTAC...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 72 bp TGCCTCCTCTATGCTTTGAAGAAGGATTCACAGGTTTaGCTGGGGATGACAGGAAATTCAACTGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: CLLYALKKDSQV*LGMTGNSTEME
Trigger: TTCCATTTCAGTTGAATTTCCTGTCATCCCCAGCAAAACCTGTGAATCCTTCTTCAAAGCATAGAGGAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 72 bp TTACCACAGTTATTCCTCCAGGCAGTCTCCCTGAGGTaGTACAGAGAAATTCTACTGAAAACCCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: LPQLFLQAVSLR*YREILLKTHPY
Trigger: ATAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGGAGGAATAACTGTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAATTAAGCCCAGGAATCTaGGACTGTAGTGACCACCTA +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKLSPGI*DCSDHL
Trigger: TAGGTGGTCACTACAGTCTCAGATTCCTGGGCTTAA...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR TCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGATTAGTTAGAGGTTGCTaGATCTGGTCAGAATATGAT +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGLVRGC*IWSEYD
Trigger: ATCATATTCTGACCAGATTCAGCAACCTCTAACTAA...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTGTCATGTTTGTTCATaGGCTCAAGAAGTCGCACTT +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTCHVCS*AQEVAL
Trigger: AAGTGCGACTTCTTGAGCTCATGAACAAACATGACA...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTATCCTCTGCCCCAACTaGCAAGAACTGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAILCPN*QELPKS
Trigger: TGACTTTGGCAGTTCTTGTCAGTTGGGGCAGAGGAT...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGAACTATTTTATTCATCTaGTCTACCTCATTGGCACCA +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRTILFI*STSLAP
Trigger: TGGTGCCAATGAGGTAGATCAGATGAATAAAATAGT...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCACTATTTTATTCATCTaGTCTACCTCATTGGCACCA +
Preference number: 4 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSTILFI*STSLAP
Trigger: TGGTGCCAATGAGGTAGATCAGATGAATAAAATAGT...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCATCAGCTGTTTTCTTaGAGAAACTGTGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLHQLFS*RNCAAE
Trigger: CTCTGCAGCACAGTTTCTTCAAGAAAACAGCTGATG...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTATGACACACGCAAAGTaGCCTTGCAATACCTTACAA +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPMTHAK*PCNTLQ
Trigger: TTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCAT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTAGGAAGTCAACTTTATaGCACACGCAAAGTGACCTT +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPRKSTL*HTQSDL
Trigger: AAGGTCACTTTGCGTGTGTCATAAAGTTGACTTCCT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGACATTTAACTCAACTTTaGTACTATACCTACCAGACC +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGHLTQL*YYTYQT
Trigger: GGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATG...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACACTTTCAGAGATTGCTaGTGCCTATGTCAATGTATC +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHTFRDC*CLCQCI
Trigger: GATACATTGACATAGGCATCAGCAATCTCTGAAAGT...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACGTCATGTATTTGGAATaGACCATCTGGTCTATTACA +
Preference number: 4 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDVMYLE*TIWSIT
Trigger: TGTAATAGACCAGATGGTTCATTCCAAATACATGAC...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTCTCCTCTACTCTCCCTaGCACCAAAGGTTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTALLYSP*HQRFSN
Trigger: GTTGGAAAACCTTTGGTGTCAGGGAGAGTAGAGGAG...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCAGCCACTTACCTCAATaGACATGTCTTCCACAAAAC +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFSHLPQ*TCLPQN
Trigger: GTTTTGTGGAAGACATGTTCATTGAGGTAAGTGGCT...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTAATGAAGACTAATCTATaGAGACTAACATGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLMKTNL*RLTCGR
Trigger: TCTCCCACATGTTAGTCTTCATAGATTAGTCTTCAT...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACTGTAAGTTGTCCAACTaGGCCATTTTCTATTCCACA +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNCKLSN*AIFYST
Trigger: TGTGGAATAGAAAATGGCTCAGTTGGACAACTTACA...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGGTCTCTCCTCCTGTATaGATCGTCTTCTTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLVSPPV*IVFFQV
Trigger: GACTTGAAAGAAGACGATGCATACAGGAGGAGAGAC...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTGAACAGATGAAGGTTTaGATGCTGAAGTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSEQMKV*MLKSLL
Trigger: GAGGAGAGACTTCAGCATGCAAACCTTCATCTGTTC...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACGTCCAAAGGAACCTTTaGCTATCAAGGAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHVQRNL*LSRSQF
Trigger: AAATTGACTCCTTGATAGGCAAAGGTTCCTTTGGAC...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTCTCCACACGATCATATaGCTTTACAACCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTLHTII*LYNLSK
Trigger: TTTGGACAGGTTGTAAAGGCATATGATCGTGTGGAG...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTCTCCACACGATCATATaGCTTTACAACCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPLHTII*LYNLSK
Trigger: TTTGGACAGGTTGTAAAGGCATATGATCGTGTGGAG...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTCTCCACACGATCATATaGCTTTACAACCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFLHTII*LYNLSK
Trigger: TTTGGACAGGTTGTAAAGGCATATGATCGTGTGGAG...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACTCGCACTTCTATCTGTaGTTGATTCAGAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHSHFYL*LIQKSL
Trigger: AAGGCTTTTCTGAATCAAGCACAGATAGAAGTGCGA...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAGCAGTGCACATCTGTTaGGCAAACTTTCGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKAVHIC*ANFRVR
Trigger: CCTAACACGAAAGTTTGCGCAACAGATGTGCACTGC...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTGCAGTGCACATCTGTTaGGCAAACTTTCGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSAVHIC*ANFRVR
Trigger: CCTAACACGAAAGTTTGCGCAACAGATGTGCACTGC...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCGTCAACTATCTTGATTaGACTGCGTTTGGGGTTACA +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFVNYLD*TAFGVT
Trigger: TGTAACCCCAAACGCAGTGCAATCAAGATAGTTGAC...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACTCTTTAAGTTCCAAGTaGCATCTGGCAACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNSLSSK*HLATSQ
Trigger: TTGAGAAGTTGCCAGATGGCACTTGGAACTTAAAGA...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAATCTCTATCAGCCCCTTaGCTCATTGTCAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKSLSAP*LIVRCP
Trigger: AGGACATCTGACAATGAGGCAAGGGGCTGATAGAGA...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTTCTCTATCAGCCCCTTaGCTCATTGTCAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: EVILVSQLNETIVGEKPVSLSAP*LIVRCP
Trigger: AGGACATCTGACAATGAGGCAAGGGGCTGATAGAGA...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTTCATGGGGCCCTTTATaGAAATTATGTGCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSSWGPL*KLCAVP
Trigger: AGGCACTGCACATAATTTGCATAAAGGGCCCCATGA...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGAGTACTGCATTTCCGTaGCCAAGTGTGTTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRSTAFP*PSVFRG
Trigger: TCCTCTAAACACACTTGGGCACGGAAATGCAGTACT...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATGACCGACCCGTTGATTaGTTCTCAGTGCACCTTGGT +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNDRPVD*FSVHLG
Trigger: ACCAAGGTGCACTGAGAAGCAATCAACGGGTCGGTC...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGGGTGGAGATACCACGTaGCGAGAAAAAGCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRGGDTT*REKAKE
Trigger: TTCTTTTGCTTTTTCTCGGCACGTGGTATCTCCACC...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACCACCTTGTGTCAAAGTaGAGAACTGCTACATTATTG +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNHLVSK*RTATLL
Trigger: CAATAATGTAGCAGTTCTGCACTTTGACACAAGGTG...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCACCTTGTGTCAAAGTaGAGAACTGCTACATTATTG +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHHLVSK*RTATLL
Trigger: CAATAATGTAGCAGTTCTGCACTTTGACACAAGGTG...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGACTCTGGACCTGTTGGTaGAATCAAGGTCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRLWTCW*NQGLAF
Trigger: GAAAGCAAGACCTTGATTGCACCAACAGGTCCAGAG...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGCTCTGGACCTGTTGGTaGAATCAAGGTCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFELWTCW*NQGLAF
Trigger: GAAAGCAAGACCTTGATTGCACCAACAGGTCCAGAG...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACTCTGAACCTGCATTCTaGGACTATCAAAATAAAGGC +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNSEPAF*DYQNKG
Trigger: GCCTTTATTTTGATAGTCGCAGAATGCAGGTTCAGA...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACTTGGGAAATAACATGTaGCATTCTCATGGGACATCT +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHLGNNM*HSHGTS
Trigger: AGATGTCCCATGAGAATGGCACATGTTATTTCCCAA...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAATACAAAGCTCCTATTaGCTCAGTATAGTTCATTTC +
Preference number: 4 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTIQSSY*LSIVHF
Trigger: GAAATGAACTATACTGAGGCAATAGGAGCTTTGTAT...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS-3UTR CCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAATTGGTCACTTATGTTTaGCTGGCGACGGTCACTGTA +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKLVTYV*LATVTV
Trigger: TACAGTGACCGTCGCCAGCCAAACATAAGTGACCAA...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGAAGGCAGAAACCTGTTaGTCACTTATGTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLKAETC*SLMFGW
Trigger: CCAGCCAAACATAAGTGACCAACAGGTTTCTGCCTT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTTCGAAACATAAAGTaGCGTTTCAAATGCACTATG +
Preference number: 4 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAFRNIK*RFKCTM
Trigger: CATAGTGCATTTGAAACGCCACTTTATGTTTCGAAA...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACAATGATACTAAGTTCTaGAGTCGCAAGGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNNDTKF*SRKEKQ
Trigger: CTGCTTTTCCTTGCGACTCCAGAACTTAGTATCATT...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGGGGACCACATATCAATaGCAAGGTCATAAGGCATTC +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLGTTYQ*QGHKAF
Trigger: GAATGCCTTATGACCTTGCCATTGATATGTGGTCCC...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CACACAAGAAACAAACTCAAGTTTCAATGTAGTCACGAGCTAGCTACAGGACTCAAGAATATGAGCAGGTaGAATACCCAGAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: HTRNKLKFQCSHELATGLKNMSR*NTQNFH
Trigger: GTGGAAGTTCTGGGTATTCCACCTGCTCATATTCTT...GAGTCCTGTAGCTAGCTCGTGACTACATTGAAACTTGAGTTTGTTTCTTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGTTCCAAGTGCCATCTaGCAACTTCTCAAAGAACTT +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFVPSAI*QLLKEL
Trigger: AAGTTCTTTGAGAAGTTGCCAGATGGCACTTGGAAC...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTGTTCCAAGTGCCATCTaGCAACTTCTCAAAGAACTT +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTVPSAI*QLLKEL
Trigger: AAGTTCTTTGAGAAGTTGCCAGATGGCACTTGGAAC...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGGTTCCAAGTGCCATCTaGCAACTTCTCAAAGAACTT +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKVPSAI*QLLKEL
Trigger: AAGTTCTTTGAGAAGTTGCCAGATGGCACTTGGAAC...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTAAGTTTACGGGTTCCTaGTGGTTTGTACTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSKFTGS*WFVLPF
Trigger: AAACGGGAGTACAAACCACCAGGAACCCGTAAACTT...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACGTTGAATTCGAGTTTTaGGGTCATAATCAAGCATCC +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNVEFEF*GHNQAS
Trigger: GGATGCTTGATTATGACCCCAAAACTCGAATTCAAC...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATCATTCTAAAGGCACCTaGCATCCAGTGCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNHSKGT*HPVLLH
Trigger: GTGGAGCAGCACTGGATGCCAGGTGCCTTTAGAATG...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGAGAGGAGCTATTCGTTaGAGAATTGTAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLRGAIR*RIVDPW
Trigger: CCAAGGGTCTACAATTCTCCAACGAATAGCTCCTCT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTACCTCCATAGAATCTTaGGTAGAGGAGCTATTCGTT +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPTSIES*VEELFV
Trigger: AACGAATAGCTCCTCTACCCAAGATTCTATGGAGGT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTACCTCCATAGAATCTTaGGTAGAGGAGCTATTCGTT +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTTSIES*VEELFV
Trigger: AACGAATAGCTCCTCTACCCAAGATTCTATGGAGGT...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTAAGACAGGGATGTCATaGAGTGGTGACTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAKTGMS*SGDCGQ
Trigger: TTGGCCACAGTCACCACTCCATGACATCCCTGTCTT...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTCTTCTCAGTGCACCTTaGTTAGGAGACCAGTCACGT +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTALLSAP*LGDQSR
Trigger: ACGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAG...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGAGAACTGCTACATTATTaGTTACAGACATCTATGTGC +
Preference number: 4 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRELLHY*LQTSMC
Trigger: GCACATAGATGTCTGTAACCAATAATGTAGCAGTTC...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCAATACTCTGGACCTGTTaGTGCAATCAAGGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSILWTC*CNQGLA
Trigger: AGCAAGACCTTGATTGCACCAACAGGTCCAGAGTAT...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTCAGGGGCAAACTCAATaGTCACTTGTGAGCCTAACA +
Preference number: 4 (lower is better)
Translates to: EVILVSQLNETIVGEKPVQGQTQ*SLVSLT
Trigger: TGTTAGGCTCACAAGTGACCATTGAGTTTGCCCCTG...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTAGGTTTTCCAACGTCTaGTCAACAGACATCCCTAGC +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSRFSNV*STDIPS
Trigger: GCTAGGGATGTCTGTTGACCAGACGTTGGAAAACCT...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTCAAAATCTGGGACCTTaGCTATGCATAATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPQNLGP*LCIMPK
Trigger: CTTTGGCATTATGCATAGCCAAGGTCCCAGATTTTG...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTGTAACAGACTTTCCTTaGAGTGGGAGCAAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAVTDFP*SGSKGW
Trigger: CCACCCTTTGCTCCCACTCCAAGGAAAGTCTGTTAC...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGACTTCACAGCCTCTCTaGATTAGAATAAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKTSQPL*IRIRSL
Trigger: CAGAGACCTTATTCTAATCCAGAGAGGCTGTGAAGT...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATTGGGCAGCAAGGGGCTaGACAATCTTCTATCCCTTG +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNWAARG*TIFYPL
Trigger: CAAGGGATAGAAGATTGTCCAGCCCCTTGCTGCCCA...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCAGATAATGTATCTGTaGCAAATGTGTGTGGGAATG +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHQIMYL*QMCVGM
Trigger: CATTCCCACACACATTTGCCACAGATACATTATCTG...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 72 bp AAAGAGGATACCTCTGAGCTATCCATGAAGATGGGTTaGGACATGGCTCTTTTAAACACTTCAATGTCCCTT +
Preference number: 4 (lower is better)
Translates to: KEDTSELSMKMG*DMALLNTSMSL
Trigger: AAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
3UTR CAA 72 bp ACGGAGAACACTGTCCACCTCATTTCCCTGCATTGTTaGCTGTATTTACGTAGAAAAAGAAGTTCCATTCAG +
Preference number: 4 (lower is better)
Translates to: TENTVHLISLHC*LYLRRKRSSIQ
Trigger: CTGAATGGAACTTCTTTTTCTACGTAAATACAGCAAACAATGCAGGGAAATGAGGTGGACAGTGTTCTCCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 72 bp AGACTGTCGCTGGTCAGTTGTGTCATCTTCTGCAAGTaGCTTAAACCTGTTAAGTTTTCTCACTCTAAAGTG +
Preference number: 4 (lower is better)
Translates to: RLSLVSCVIFCK*LKPVKFSHSKV
Trigger: CACTTTAGAGTGAGAAAACTTAACAGGTTTAAGCAACTTGCAGAAGATGACACAACTGACCAGCGACAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCACTTCTATCTGTGCTTaGTTCAGAAAAGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFTSICA*FRKAFL
Trigger: CAAGAAGGCTTTTCTGAATCAAGCACAGATAGAAGT...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGTGTCATGTTTGTTCATaGGCTCAAGAAGTCGCACTT +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLCHVCS*AQEVAL
Trigger: AAGTGCGACTTCTTGAGCTCATGAACAAACATGACA...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGTGTCATGTTTGTTCATaGGCTCAAGAAGTCGCACTT +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRCHVCS*AQEVAL
Trigger: AAGTGCGACTTCTTGAGCTCATGAACAAACATGACA...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAACAAAGTCAACTATCTTaGTTGCACTGCGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKQSQLS*LHCVWG
Trigger: ACCCCAAACGCAGTGCAATCAAGATAGTTGACTTTG...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTCAAAGTCAACTATCTTaGTTGCACTGCGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSQSQLS*LHCVWG
Trigger: ACCCCAAACGCAGTGCAATCAAGATAGTTGACTTTG...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATATCCTCTGCCCCAACTaGCAAGAACTGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNILCPN*QELPKS
Trigger: TGACTTTGGCAGTTCTTGTCAGTTGGGGCAGAGGAT...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTATTTTATTCATCTaGTCTACCTCATTGGCACCA +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNTILFI*STSLAP
Trigger: TGGTGCCAATGAGGTAGATCAGATGAATAAAATAGT...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAGCTTGGTCAAGAATATaGGCAGGTGGAATACCCAGA +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISAWSRI*AGGIPR
Trigger: TCTGGGTATTCCACCTGCTCATATTCTTGACCAAGC...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTACTCCAAGAATGTTATaGAGTTTACGGGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSTPRML*SLRVPG
Trigger: ACCAGGAACCCGTAAACTTCATAACATTCTTGGAGT...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGACTCCAAGAATGTTATaGAGTTTACGGGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRTPRML*SLRVPG
Trigger: ACCAGGAACCCGTAAACTTCATAACATTCTTGGAGT...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAGTGTTAATCTCCTCCTaGTTCAAGCAGCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKVLISS*FKQLCT
Trigger: AGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACAC...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTAAAAGAGGATACCTCTaGGCTATCCATGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSKRGYL*AIHEDG
Trigger: CCCATCTTCATGGATAGCTCAGAGGTATCCTCTTTT...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAAAAAGAGGATACCTCTaGGCTATCCATGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKKRGYL*AIHEDG
Trigger: CCCATCTTCATGGATAGCTCAGAGGTATCCTCTTTT...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
41% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGAAAAAGAGGATACCTCTaGGCTATCCATGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRKRGYL*AIHEDG
Trigger: CCCATCTTCATGGATAGCTCAGAGGTATCCTCTTTT...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCAAAAGAAAGGCCTCTTaGATTACCCATTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFKRKAS*ITHSLC
Trigger: ACACAGAGAATGGGTAATTCAAGAGGCCTTTCTTTT...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGATGACACACGCAAAGTaGCCTTGCAATACCTTACAA +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLMTHAK*PCNTLQ
Trigger: TTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCAT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCAAACCACTACTTCTGTaGCCTTCAACCAATAAGGAA +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFKPLLL*PSTNKE
Trigger: TTCCTTATTGGTTGAAGGTCACAGAAGTAGTGGTTT...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTACCTTCAGAAGCCTaGACACACTTAGAATGTAAC +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPLPSEA*THLECN
Trigger: GTTACATTCTAAGTGTGTTCAGGCTTCTGAAGGTAA...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTGCCTCCTCTATGCTTTaGAGAAGGATTCACAGGTTT +
Preference number: 4 (lower is better)
Translates to: EVILVSQLNETIVGEKPVASSML*RRIHRF
Trigger: AAACCTGTGAATCCTTCTTCAAAGCATAGAGGAGGC...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCACTCTGTCCTGCATCATaGACTTTTGCCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISLCPAS*TFATTL
Trigger: CAAAGTGGTGGCAAAAGTTCATGATGCAGGACAGAG...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCAAAAATCCTGCTAGTGTaGTGGTCATCCGTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSKILLV*WSSVVL
Trigger: TAAAACCACGGATGACCATCACACTAGCAGGATTTT...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGAGAAGGTCTTGGTATGTaGTCTCGAAAGTCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPREGLGM*SRKSRS
Trigger: TGACCTTGACTTTCGAGATCACATACCAAGACCTTC...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTCAGCCATGTAAAATGTaGAAATCACCCTTAGTTTGG +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPQPCKM*KSPLVW
Trigger: CCAAACTAAGGGTGATTTTCACATTTTACATGGCTG...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAACCTCATGAAAACTACTaGCTCCAAGAGATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKPHENY*LQEMFL
Trigger: CAGGAACATCTCTTGGAGTCAGTAGTTTTCATGAGG...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS-3UTR GCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGGAACAGATGAAGGTTTaGATGCTGAAGTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFEEQMKV*MLKSLL
Trigger: GAGGAGAGACTTCAGCATGCAAACCTTCATCTGTTC...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAGAACAGATGAAGGTTTaGATGCTGAAGTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKEQMKV*MLKSLL
Trigger: GAGGAGAGACTTCAGCATGCAAACCTTCATCTGTTC...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTGTCCAAAGGAACCTTTaGCTATCAAGGAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPVQRNL*LSRSQF
Trigger: AAATTGACTCCTTGATAGGCAAAGGTTCCTTTGGAC...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTTCGCACTTCTATCTGTaGTTGATTCAGAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFSHFYL*LIQKSL
Trigger: AAGGCTTTTCTGAATCAAGCACAGATAGAAGTGCGA...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCTCGCACTTCTATCTGTaGTTGATTCAGAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFSHFYL*LIQKSL
Trigger: AAGGCTTTTCTGAATCAAGCACAGATAGAAGTGCGA...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTGTCAACTATCTTGATTaGACTGCGTTTGGGGTTACA +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSVNYLD*TAFGVT
Trigger: TGTAACCCCAAACGCAGTGCAATCAAGATAGTTGAC...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGGTCAACTATCTTGATTaGACTGCGTTTGGGGTTACA +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRVNYLD*TAFGVT
Trigger: TGTAACCCCAAACGCAGTGCAATCAAGATAGTTGAC...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTCTCAAAGAACTTTCTTaGTTTTGGTGCTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPLKELS*FWCLVK
Trigger: CTTGACCAAGCACCAAAAGCAAGAAAGTTCTTTGAG...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTTCAGTCATGTAATGTaGAGGACCTGTATTAGCAGA +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTFSHVM*RTCISR
Trigger: TCTGCTAATACAGGTCCTGCACATTACATGACTGAA...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAATCATGGGGCCCTTTATaGAAATTATGTGCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKSWGPL*KLCAVP
Trigger: AGGCACTGCACATAATTTGCATAAAGGGCCCCATGA...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTCACCTTGTGTCAAAGTaGAGAACTGCTACATTATTG +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTHLVSK*RTATLL
Trigger: CAATAATGTAGCAGTTCTGCACTTTGACACAAGGTG...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGCAGAGGTAGATTACTaGTTCTTTTCTAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFAEVDY*FFSRLL
Trigger: AAGAAGCCTAGAAAAGAAGCAGTAATCTACCTCTGC...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTTAAGACTTGTCTCTaGCTCCTCTATGCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPFKTCL*LLYALK
Trigger: CTTCAAAGCATAGAGGAGGCAGAGACAAGTCTTAAA...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCATTTCTTTCCTGGATTTaGGGGCAATGGAAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISFLSWI*GQWKWE
Trigger: CTCCCACTTCCATTGCCCGCAAATCCAGGAAAGAAA...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATTACCTCACTGAGGCATaGACAGCATCTCCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNYLTEA*TASPKW
Trigger: CCACTTAGGAGATGCTGTGCATGCCTCAGTGAGGTA...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGAAACTCTTAAATAGATaGAGGGACTGTGCGGTATGC +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLKLLNR*RDCAVC
Trigger: GCATACCGCACAGTCCCTGCATCTATTTAAGAGTTT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTAAACTCTTAAATAGATaGAGGGACTGTGCGGTATGC +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSKLLNR*RDCAVC
Trigger: GCATACCGCACAGTCCCTGCATCTATTTAAGAGTTT...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAATCCATTCTTTCAGATaGCTACCGGACATCTCCACA +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKIHSFR*LPDIST
Trigger: TGTGGAGATGTCCGGTAGGCATCTGAAAGAATGGAT...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGATTTCGAAACATAAAGTaGCGTTTCAAATGCACTATG +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGFRNIK*RFKCTM
Trigger: CATAGTGCATTTGAAACGCCACTTTATGTTTCGAAA...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTAATGATACTAAGTTCTaGAGTCGCAAGGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTNDTKF*SRKEKQ
Trigger: CTGCTTTTCCTTGCGACTCCAGAACTTAGTATCATT...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTAATGATACTAAGTTCTaGAGTCGCAAGGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFNDTKF*SRKEKQ
Trigger: CTGCTTTTCCTTGCGACTCCAGAACTTAGTATCATT...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAGGGACCACATATCAATaGCAAGGTCATAAGGCATTC +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKGTTYQ*QGHKAF
Trigger: GAATGCCTTATGACCTTGCCATTGATATGTGGTCCC...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGAAGAATATGAGCAGGTaGAATACCCAGAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLKNMSR*NTQNFH
Trigger: GTGGAAGTTCTGGGTATTCCACCTGCTCATATTCTT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCAGTTCCAAGTGCCATCTaGCAACTTCTCAAAGAACTT +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSVPSAI*QLLKEL
Trigger: AAGTTCTTTGAGAAGTTGCCAGATGGCACTTGGAAC...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCATTTACGGGTTCCTGGTaGTTTGTACTCCCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISFTGSW*FVLPFS
Trigger: GGAAAACGGGAGTACAAACCACCAGGAACCCGTAAA...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGAAGTTTACGGGTTCCTaGTGGTTTGTACTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFEKFTGS*WFVLPF
Trigger: AAACGGGAGTACAAACCACCAGGAACCCGTAAACTT...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAAAGTTTACGGGTTCCTaGTGGTTTGTACTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKKFTGS*WFVLPF
Trigger: AAACGGGAGTACAAACCACCAGGAACCCGTAAACTT...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CACACAAGAAACAAACTCAAGTTTCAATGTAGTCACGAGCTAGCTACAGGACTCGTTGAATTCGAGTTTTaGGGTCATAATCAAGCATCC +
Preference number: 4 (lower is better)
Translates to: HTRNKLKFQCSHELATGLVEFEF*GHNQAS
Trigger: GGATGCTTGATTATGACCCCAAAACTCGAATTCAAC...GAGTCCTGTAGCTAGCTCGTGACTACATTGAAACTTGAGTTTGTTTCTTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTGTTGAATTCGAGTTTTaGGGTCATAATCAAGCATCC +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTVEFEF*GHNQAS
Trigger: GGATGCTTGATTATGACCCCAAAACTCGAATTCAAC...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGTTGAATTCGAGTTTTaGGGTCATAATCAAGCATCC +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFVEFEF*GHNQAS
Trigger: GGATGCTTGATTATGACCCCAAAACTCGAATTCAAC...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCGTTGAATTCGAGTTTTaGGGTCATAATCAAGCATCC +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFVEFEF*GHNQAS
Trigger: GGATGCTTGATTATGACCCCAAAACTCGAATTCAAC...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTAGAAAATTGGTATGTTaGATGTCCAGCTATGCCAGT +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFRKLVC*MSSYAS
Trigger: ACTGGCATAGCTGGACATCCAACATACCAATTTTCT...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTAGAAAATTGGTATGTTaGATGTCCAGCTATGCCAGT +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPRKLVC*MSSYAS
Trigger: ACTGGCATAGCTGGACATCCAACATACCAATTTTCT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACGAACTGCTACATTATTaGTTACAGACATCTATGTGC +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNELLHY*LQTSMC
Trigger: GCACATAGATGTCTGTAACCAATAATGTAGCAGTTC...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACTTCCTTTCTTACATGTaGTTAACTTCAACTTTACGC +
Preference number: 4 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDFLSYM*LTSTLR
Trigger: GCGTAAAGTTGAAGTTAACCACATGTAAGAAAGGAA...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAACTTGTATTCTGTCTATaGGGATACCACCCAGAATGC +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKLVFCL*GYHPEC
Trigger: GCATTCTGGGTGGTATCCCCATAGACAGAATACAAG...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGAAACCACCACTCAATTaGAATACAGTAGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLKPPLN*NTVAVL
Trigger: CAGGACTGCTACTGTATTCCAATTGAGTGGTGGTTT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATAAGTCAAGGTCAGCGTaGAGAACTGGAAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNKSRSA*RTGKRP
Trigger: AGGCCTCTTTCCAGTTCTCCACGCTGACCTTGACTT...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTATGAAGACTAACATGTaGGAGAAGCAAGAGGGGACT +
Preference number: 4 (lower is better)
Translates to: EVILVSQLNETIVGEKPVMKTNM*EKQEGT
Trigger: AGTCCCCTCTTGCTTCTCCCACATGTTAGTCTTCAT...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGGCTCAAACTGTAGTTTaGGCTCAGATAATGTATCTG +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKAQTVV*AQIMYL
Trigger: CAGATACATTATCTGAGCCCAAACTACAGTTTGAGC...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGCTCAAACTGTAGTTTaGGCTCAGATAATGTATCTG +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFAQTVV*AQIMYL
Trigger: CAGATACATTATCTGAGCCCAAACTACAGTTTGAGC...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGACTCTTGCTCTCCAAGTaGTTTCTCTTATTTTATTGT +
Preference number: 4 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGLLLSK*FLLFYC
Trigger: ACAATAAAATAAGAGAAACCACTTGGAGAGCAAGAG...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS-3UTR TCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTTTAGTTAGAGGTTGCTaGATCTGGTCAGAATATGAT +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFLVRGC*IWSEYD
Trigger: ATCATATTCTGACCAGATTCAGCAACCTCTAACTAA...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTTAGTTAGAGGTTGCTaGATCTGGTCAGAATATGAT +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTLVRGC*IWSEYD
Trigger: ATCATATTCTGACCAGATTCAGCAACCTCTAACTAA...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGACTTCTATCTGTGCTTaGTTCAGAAAAGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLTSICA*FRKAFL
Trigger: CAAGAAGGCTTTTCTGAATCAAGCACAGATAGAAGT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTACTTCTATCTGTGCTTaGTTCAGAAAAGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSTSICA*FRKAFL
Trigger: CAAGAAGGCTTTTCTGAATCAAGCACAGATAGAAGT...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTACTATTTTATTCATCTaGTCTACCTCATTGGCACCA +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFTILFI*STSLAP
Trigger: TGGTGCCAATGAGGTAGATCAGATGAATAAAATAGT...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTGTGTTAATCTCCTCCTaGTTCAAGCAGCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAVLISS*FKQLCT
Trigger: AGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACAC...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTAAATTAGTTGGCAAATaGCCAAGACCAACATCTGAA +
Preference number: 4 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPKLVGK*PRPTSE
Trigger: TTCAGATGTTGGTCTTGGTCATTTGCCAACTAATTT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGAAAAGAAAGGCCTCTTaGATTACCCATTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLKRKAS*ITHSLC
Trigger: ACACAGAGAATGGGTAATTCAAGAGGCCTTTCTTTT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTTTAAGAAATCTGAATaGAGTCTGGGTATACCGAAG +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTFKKSE*SLGIPK
Trigger: CTTCGGTATACCCAGACTTCATTCAGATTTCTTAAA...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTCTACAAATTACTTGGTaGTGTATGTTTTCACGCAAG +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFLQITW*CMFSRK
Trigger: CTTGCGTGAAAACATACATCACCAAGTAATTTGTAG...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATTGCCACCACTTTGCCTaGCCCAAACTTAATGCACTT +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNCHHFA*PKLNAL
Trigger: AAGTGCATTAAGTTTGGGTCAGGCAAAGTGGTGGCA...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTTGGACAACTTGCAAATaGATGTGGTTATGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFWTTCK*MWLCSN
Trigger: ATTGGAACATAACCACATTCATTTGCAAGTTGTCCA...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAACTAATGTCAACTCTTTaGGCAACTGTTGTCGTGGAA +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKLMSTL*ATVVVE
Trigger: TTCCACGACAACAGTTGCTCAAAGAGTTGACATTAG...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGCTCAACTTTTTGTTTTaGGACAATGTTCTCACTCTG +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKLNFLF*DNVLTL
Trigger: CAGAGTGAGAACATTGTCTCAAAACAAAAAGTTGAG...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGGTCCAAAGGAACCTTTaGCTATCAAGGAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRVQRNL*LSRSQF
Trigger: AAATTGACTCCTTGATAGGCAAAGGTTCCTTTGGAC...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTGTCCAAAGGAACCTTTaGCTATCAAGGAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSVQRNL*LSRSQF
Trigger: AAATTGACTCCTTGATAGGCAAAGGTTCCTTTGGAC...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGCTCCACACGATCATATaGCTTTACAACCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFELHTII*LYNLSK
Trigger: TTTGGACAGGTTGTAAAGGCATATGATCGTGTGGAG...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTTCGCACTTCTATCTGTaGTTGATTCAGAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSSHFYL*LIQKSL
Trigger: AAGGCTTTTCTGAATCAAGCACAGATAGAAGTGCGA...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTCTCAAAGAACTTTCTTaGTTTTGGTGCTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSLKELS*FWCLVK
Trigger: CTTGACCAAGCACCAAAAGCAAGAAAGTTCTTTGAG...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTTCTTTAAGTTCCAAGTaGCATCTGGCAACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSSLSSK*HLATSQ
Trigger: TTGAGAAGTTGCCAGATGGCACTTGGAACTTAAAGA...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCATCTTTAAGTTCCAAGTaGCATCTGGCAACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSSLSSK*HLATSQ
Trigger: TTGAGAAGTTGCCAGATGGCACTTGGAACTTAAAGA...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGTTCAGTCATGTAATGTaGAGGACCTGTATTAGCAGA +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRFSHVM*RTCISR
Trigger: TCTGCTAATACAGGTCCTGCACATTACATGACTGAA...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGTTCAGTCATGTAATGTaGAGGACCTGTATTAGCAGA +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLFSHVM*RTCISR
Trigger: TCTGCTAATACAGGTCCTGCACATTACATGACTGAA...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCATCAGCATGCTTACTGTaGCTGACAAACTTCACCACA +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISSACLL*LTNFTT
Trigger: TGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGA...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGTCAAAGTGCAGAACTaGTACATTATTGGTTACAGA +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFVKVQN*YIIGYR
Trigger: TCTGTAACCAATAATGTAGCAGTTCTGCACTTTGAC...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCACACCTTGTGTCAAAGTaGAGAACTGCTACATTATTG +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSHLVSK*RTATLL
Trigger: CAATAATGTAGCAGTTCTGCACTTTGACACAAGGTG...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTCTCATGCTATTTCACTaGATTCCGCTTTTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSLMLFH*IPLFRF
Trigger: AAAGCGGAAAAGCGGAATGCAGTGAAATAGCATGAG...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGAAACGCTCTTTCTCATaGTATTTCACTGCATTCCGC +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFEKRSFS*YFTAFR
Trigger: GCGGAATGCAGTGAAATAGCATGAGAAAGAGCGTTT...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATACATCTGGCAATTTCTaGCTTTCCCGGAGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNTSGNF*LSRRLV
Trigger: AACAAGCCTCCGGGAAAGGCAGAAATTGCCAGATGT...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGAGTTGTGTCATCTTCTaGAAGTTGCTTAAACCTGTT +
Preference number: 4 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKSCVIF*KLLKPV
Trigger: AACAGGTTTAAGCAACTTGCAGAAGATGACACAACT...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACTTTCGAAACATAAAGTaGCGTTTCAAATGCACTATG +
Preference number: 4 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHFRNIK*RFKCTM
Trigger: CATAGTGCATTTGAAACGCCACTTTATGTTTCGAAA...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAAAGAATATGAGCAGGTaGAATACCCAGAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKKNMSR*NTQNFH
Trigger: GTGGAAGTTCTGGGTATTCCACCTGCTCATATTCTT...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAGTTCCAAGTGCCATCTaGCAACTTCTCAAAGAACTT +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKVPSAI*QLLKEL
Trigger: AAGTTCTTTGAGAAGTTGCCAGATGGCACTTGGAAC...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAACCTCCATAGAATCTTaGGTAGAGGAGCTATTCGTT +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKTSIES*VEELFV
Trigger: AACGAATAGCTCCTCTACCCAAGATTCTATGGAGGT...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGAGAAAATTGGTATGTTaGATGTCCAGCTATGCCAGT +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLRKLVC*MSSYAS
Trigger: ACTGGCATAGCTGGACATCCAACATACCAATTTTCT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGAACTGCTACATTATTaGTTACAGACATCTATGTGC +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFELLHY*LQTSMC
Trigger: GCACATAGATGTCTGTAACCAATAATGTAGCAGTTC...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACTTCCTTTCTTACATGTaGTTAACTTCAACTTTACGC +
Preference number: 4 (lower is better)
Translates to: EDTSELSMKMGLDMALLNFLSYM*LTSTLR
Trigger: GCGTAAAGTTGAAGTTAACCACATGTAAGAAAGGAA...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCACCAAGTCATGTATTTaGAATGAACCATCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFTKSCI*NEPSGL
Trigger: TAGACCAGATGGTTCATTCCAAATACATGACTTGGT...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAACAAAATCTGGGACCTTaGCTATGCATAATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKQNLGP*LCIMPK
Trigger: CTTTGGCATTATGCATAGCCAAGGTCCCAGATTTTG...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTAAAAATACTATTAGCTaGGTGTGGTGGTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: EVILVSQLNETIVGEKPVKNTIS*VWWCAP
Trigger: AGGTGCACACCACCACACCCAGCTAATAGTATTTTT...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCATACTTTTTGTGGAGATaGGGGGTCTCACTATACCAC +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISYFLWR*GVSLYH
Trigger: GTGGTATAGTGAGACCCCCCATCTCCACAAAAAGTA...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGGAGGTAACTGAATCATaGAGGCAGGATTTTACCATG +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFEEVTES*RQDFTM
Trigger: CATGGTAAAATCCTGCCTCCATGATTCAGTTACCTC...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTGTGGCAAATGTGTGTaGGAATGGAGCTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFECGKCV*EWSSSF
Trigger: AAAAGAAGAGCTCCATTCCCACACACATTTGCCACA...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCACAGATAATGTATCTGTaGCAAATGTGTGTGGGAATG +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSQIMYL*QMCVGM
Trigger: CATTCCCACACACATTTGCCACAGATACATTATCTG...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 72 bp GAACTGAGTGCCTGCTATCTCGTCTTCGTGTGTATTTaGATTATGTATCTCCCTATTGGAAGAACAGAAAAG +
Preference number: 4 (lower is better)
Translates to: ELSACYLVFVCI*IMYLPIGRTEK
Trigger: CTTTTCTGTTCTTCCAATAGGGAGATACATAATCAAAATACACACGAAGACGAGATAGCAGGCACTCAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
3UTR CAA 72 bp TTGTGTTCCTTAGGACAGCTACCATGTCATTGCACTTaGCTGCCTAATTCAGTAACAATTCATACTCCATTG +
Preference number: 4 (lower is better)
Translates to: LCSLGQLPCHCT*LPNSVTIHTPL
Trigger: CAATGGAGTATGAATTGTTACTGAATTAGGCAGCAAAGTGCAATGACATGGTAGCTGTCCTAAGGAACACAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGACTATTTTATTCATCTaGTCTACCTCATTGGCACCA +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLTILFI*STSLAP
Trigger: TGGTGCCAATGAGGTAGATCAGATGAATAAAATAGT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATCATCAGCTGTTTTCTTaGAGAAACTGTGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNHQLFS*RNCAAE
Trigger: CTCTGCAGCACAGTTTCTTCAAGAAAACAGCTGATG...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTAAAAGAAAGGCCTCTTaGATTACCCATTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSKRKAS*ITHSLC
Trigger: ACACAGAGAATGGGTAATTCAAGAGGCCTTTCTTTT...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGATTACCTTCAGAAGCCTaGACACACTTAGAATGTAAC +
Preference number: 4 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRLPSEA*THLECN
Trigger: GTTACATTCTAAGTGTGTTCAGGCTTCTGAAGGTAA...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTTTTCTAGGCTTCTTTTaGTCCTGGACAGGTAAATTA +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSFLGFF*SWTGKL
Trigger: TAATTTACCTGTCCAGGATCAAAAGAAGCCTAGAAA...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGTTTAAGAAATCTGAATaGAGTCTGGGTATACCGAAG +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLFKKSE*SLGIPK
Trigger: CTTCGGTATACCCAGACTTCATTCAGATTTCTTAAA...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTGGTCTTTCAGACAGATaGAACATTAAGCACTTATAC +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSGLSDR*NIKHLY
Trigger: GTATAAGTGCTTAATGTTTCATCTGTCTGAAAGACC...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGTATAAACTTAAGAGCTaGTTTCTGTCACCCTCATCT +
Preference number: 4 (lower is better)
Translates to: VIASEMVGSSNFESKSIRYKLKS*FLSPSS
Trigger: AGATGAGGGTGACAGAAATCAGCTCTTAAGTTTATA...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGAACTGATTGTTTTCTTTaGTTCAGAGTGTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRTDCFL*FRVSLQ
Trigger: CTGCAGAGACACTCTGAATCAAAGAAAACAATCAGT...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATGAAGGTCTTGGTATGTaGTCTCGAAAGTCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNEGLGM*SRKSRS
Trigger: TGACCTTGACTTTCGAGATCACATACCAAGACCTTC...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGTGGACAACTTGCAAATaGATGTGGTTATGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLWTTCK*MWLCSN
Trigger: ATTGGAACATAACCACATTCATTTGCAAGTTGTCCA...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCACAAGTTTACTTTCTCTaGGCATGTTTCTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISQVYFL*ACFFSC
Trigger: GCAGCTGAAGAAACATGCTCAGAGAAAGTAAACTTG...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTTGTAAGTTGTCCAACTaGGCCATTTTCTATTCCACA +
Preference number: 4 (lower is better)
Translates to: EVILVSQLNETIVGEKPVCKLSN*AIFYST
Trigger: TGTGGAATAGAAAATGGCTCAGTTGGACAACTTACA...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTCTCCACACGATCATATaGCTTTACAACCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTALHTII*LYNLSK
Trigger: TTTGGACAGGTTGTAAAGGCATATGATCGTGTGGAG...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAATCGCACTTCTATCTGTaGTTGATTCAGAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKSHFYL*LIQKSL
Trigger: AAGGCTTTTCTGAATCAAGCACAGATAGAAGTGCGA...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGCTCAAAGAACTTTCTTaGTTTTGGTGCTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFELKELS*FWCLVK
Trigger: CTTGACCAAGCACCAAAAGCAAGAAAGTTCTTTGAG...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTGTCAAAGTGCAGAACTaGTACATTATTGGTTACAGA +
Preference number: 4 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSVKVQN*YIIGYR
Trigger: TCTGTAACCAATAATGTAGCAGTTCTGCACTTTGAC...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCACATCCAGTCGAAATaGTACCAACTAAAATATGAG +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLHIQSK*YQLKYE
Trigger: CTCATATTTTAGTTGGTAGCATTTCGACTGGATGTG...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTTTTAAGACTTGTCTCTaGCTCCTCTATGCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSFKTCL*LLYALK
Trigger: CTTCAAAGCATAGAGGAGGCAGAGACAAGTCTTAAA...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAACCACTCAAAACCATTTaGCTTTTTAGTCGACTACTG +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKPLKTI*LFSRLL
Trigger: CAGTAGTCGACTAAAAAGGCAAATGGTTTTGAGTGG...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTAAACACTATCAAGTCTaGAGCAAAAGTGAATTTCCA +
Preference number: 4 (lower is better)
Translates to: DTSELSMKMGLDMALLNTKHYQV*SKSEFP
Trigger: TGGAAATTCACTTTTGCTGCAGACTTGATAGTGTTT...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCATCATCCCAATCATCCTaGTTAATAATCCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSSSQSS*LIILFP
Trigger: AGGGAAAAGGATTATTAAGCAGGATGATTGGGATGA...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS-3UTR GCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTCCTCTCAATTCCCAATaGCTCCAATTCCTAAATTTC +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSPLNSQ*LQFLNF
Trigger: GAAATTTAGGAATTGGAGGCATTGGGAATTGAGAGG...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS-3UTR CCA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTTTTCGAAACATAAAGTaGCGTTTCAAATGCACTATG +
Preference number: 4 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFFRNIK*RFKCTM
Trigger: CATAGTGCATTTGAAACGCCACTTTATGTTTCGAAA...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
39% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGAATGATACTAAGTTCTaGAGTCGCAAGGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFENDTKF*SRKEKQ
Trigger: CTGCTTTTCCTTGCGACTCCAGAACTTAGTATCATT...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATAAGTTTACGGGTTCCTaGTGGTTTGTACTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNKFTGS*WFVLPF
Trigger: AAACGGGAGTACAAACCACCAGGAACCCGTAAACTT...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAGTTGAATTCGAGTTTTaGGGTCATAATCAAGCATCC +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKVEFEF*GHNQAS
Trigger: GGATGCTTGATTATGACCCCAAAACTCGAATTCAAC...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAACCTCCATAGAATCTTaGGTAGAGGAGCTATTCGTT +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISTSIES*VEELFV
Trigger: AACGAATAGCTCCTCTACCCAAGATTCTATGGAGGT...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTAAATCAGCGTCCAGTTaGAGAAACACTTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAKSASS*RNTLSP
Trigger: AGGAGACAAAGTGTTTCTCCAACTGGACGCTGATTT...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTTCCATTCCCACTGTTaGGAAATAACATGTGCCATT +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFEFHSHC*EITCAI
Trigger: AATGGCACATGTTATTTCCCAACAGTGGGAATGGAA...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAGAGGTAACTGAATCATaGAGGCAGGATTTTACCATG +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISEVTES*RQDFTM
Trigger: CATGGTAAAATCCTGCCTCCATGATTCAGTTACCTC...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAGGTTTTAGATCACAGTaGATGATACTAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKGFRSQ*MILSSG
Trigger: TCCAGAACTTAGTATCATTCACTGTGATCTAAAACC...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTACTATTTTATTCATCTaGTCTACCTCATTGGCACCA +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSTILFI*STSLAP
Trigger: TGGTGCCAATGAGGTAGATCAGATGAATAAAATAGT...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTAAATTAGTTGGCAAATaGCCAAGACCAACATCTGAA +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSKLVGK*PRPTSE
Trigger: TTCAGATGTTGGTCTTGGTCATTTGCCAACTAATTT...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAACTTTCAGAGATTGCTaGTGCCTATGTCAATGTATC +
Preference number: 4 (lower is better)
Translates to: RTRLVCDVHKNALSHAISTFRDC*CLCQCI
Trigger: GATACATTGACATAGGCATCAGCAATCTCTGAAAGT...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTAAGAAACCAGGGTTATaGAAATCAGAACTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAKKPGL*KSELLL
Trigger: GAGGAGAAGTTCTGATTTTCATAACCCTGGTTTCTT...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTCTACAAATTACTTGGTaGTGTATGTTTTCACGCAAG +
Preference number: 4 (lower is better)
Translates to: EVILVSQLNETIVGEKPVLQITW*CMFSRK
Trigger: CTTGCGTGAAAACATACATCACCAAGTAATTTGTAG...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTCTTATCTACCTGAAGTaGACAGTTAAATCCCATGAT +
Preference number: 4 (lower is better)
Translates to: EVILVSQLNETIVGEKPVLIYLK*TVKSHD
Trigger: ATCATGGGATTTAACTGTTCACTTCAGGTAGATAAG...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGACTCAACTTTTTGTTTTaGGACAATGTTCTCACTCTG +
Preference number: 4 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRLNFLF*DNVLTL
Trigger: CAGAGTGAGAACATTGTCTCAAAACAAAAAGTTGAG...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTTCTGACAAAAATTCATaGGAGCTGTTGATAGTGAAG +
Preference number: 4 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSSDKNS*ELLIVK
Trigger: CTTCACTATCAACAGCTCTCATGAATTTTTGTCAGA...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAGACAATTACCCCAACTaGGGAATATCTAACATAACT +
Preference number: 4 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKDNYPN*GISNIT
Trigger: AGTTATGTTAGATATTCCTCAGTTGGGGTAATTGTC...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS-3UTR GCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTCTCAAAGAACTTTCTTaGTTTTGGTGCTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTALKELS*FWCLVK
Trigger: CTTGACCAAGCACCAAAAGCAAGAAAGTTCTTTGAG...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR GCA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGAGTCAAAGTGCAGAACTaGTACATTATTGGTTACAGA +
Preference number: 4 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRVKVQN*YIIGYR
Trigger: TCTGTAACCAATAATGTAGCAGTTCTGCACTTTGAC...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGAGTTGTGTCATCTTCTaGAAGTTGCTTAAACCTGTT +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFESCVIF*KLLKPV
Trigger: AACAGGTTTAAGCAACTTGCAGAAGATGACACAACT...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGTTTCGAAACATAAAGTaGCGTTTCAAATGCACTATG +
Preference number: 4 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLFRNIK*RFKCTM
Trigger: CATAGTGCATTTGAAACGCCACTTTATGTTTCGAAA...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTAGAAAATTGGTATGTTaGATGTCCAGCTATGCCAGT +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTARKLVC*MSSYAS
Trigger: ACTGGCATAGCTGGACATCCAACATACCAATTTTCT...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATACTTCTATCTGTGCTTaGTTCAGAAAAGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNTSICA*FRKAFL
Trigger: CAAGAAGGCTTTTCTGAATCAAGCACAGATAGAAGT...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTAAATTAGTTGGCAAATaGCCAAGACCAACATCTGAA +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAKLVGK*PRPTSE
Trigger: TTCAGATGTTGGTCTTGGTCATTTGCCAACTAATTT...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR TCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTGGTCTTTCAGACAGATaGAACATTAAGCACTTATAC +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAGLSDR*NIKHLY
Trigger: GTATAAGTGCTTAATGTTTCATCTGTCTGAAAGACC...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATACTGATTGTTTTCTTTaGTTCAGAGTGTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNTDCFL*FRVSLQ
Trigger: CTGCAGAGACACTCTGAATCAAAGAAAACAATCAGT...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTTCTGACAAAAATTCATaGGAGCTGTTGATAGTGAAG +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTASDKNS*ELLIVK
Trigger: CTTCACTATCAACAGCTCTCATGAATTTTTGTCAGA...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR GCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATGCATTAAGGACTGTCTaGAAAAGCATGTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNALRTV*KSMSKS
Trigger: ACTTTTGGACATGCTTTTGCAGACAGTCCTTAATGC...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CCA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTTTCGAAACATAAAGTaGCGTTTCAAATGCACTATG +
Preference number: 4 (lower is better)
Translates to: KACPKVIASEMVGSSNFEFRNIK*RFKCTM
Trigger: CATAGTGCATTTGAAACGCCACTTTATGTTTCGAAA...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CCA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTTTATATACTTACATCTaGCAATTTCTGCCTTTCCCG +
Preference number: 4 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTALYTYI*QFLPFP
Trigger: CGGGAAAGGCAGAAATTGCCAGATGTAAGTATATAA...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR TCA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATATGAAGACTAATCTATaGAGACTAACATGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNMKTNL*RLTCGR
Trigger: TCTCCCACATGTTAGTCTTCATAGATTAGTCTTCAT...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS GCA 90 bp GAGGAGCCACCGCCGCGCCCCAGACATCGCAGGAATTCCGGACGCTaGGCCGGGCCCGGCGGCCCTGAGGCTGGCACCTGGCTCCGGTCG +
Preference number: 5 (lower is better)
Translates to: EEPPPRPRHRRNSGR*AGPGGPEAGTWLRS
Trigger: CGACCGGAGCCAGGTGCCAGCCTCAGGGCCGCCGGGCCCGGCGCAGCGTCCGGAATTCCTGCGATGTCTGGGGCGCGGCGGTGGCTCCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647425.1
CDS CCA 90 bp TCGCCTCTCTCCCCGGGAAGCGCGGCGGCCGCGACCGTCCGCGCGTaGAGCCGGTTCTTCGAAGGGCTGGCGGGCCTCCTAGCCGGAAAA +
Preference number: 5 (lower is better)
Translates to: SPLSPGSAAAATVRA*SRFFEGLAGLLAGK
Trigger: TTTTCCGGCTAGGAGGCCCGCCAGCCCTTCGAAGAACCGGCTCCACGCGCGGACGGTCGCGGCCGCCGCGCTTCCCGGGGAGAGAGGCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647425.1
CDS GCA 90 bp CGGCGCAGAGGGCGGCGTCGGCGAGGCCGGGCGCCGAGCGGCGGCTaGTGCCGGCGGCTTCTTCCCGAGGAGGATTTTGTAAATCTCACA +
Preference number: 5 (lower is better)
Translates to: RRRGRRRRGRAPSGG*CRRLLPEEDFVNLT
Trigger: TGTGAGATTTACAAAATCCTCCTCGGGAAGAAGCCGCCGGCAGCAGCCGCCGCTCGGCGCCCGGCCTCGCCGACGCCGCCCTCTGCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000644942.1
ENST00000647188.2
ENST00000647504.1
CDS GCA 90 bp CGCAGAGGGCGGCGTCGGCGAGGCCGGGCGCCGAGCGGCGGCTGCTaGCGGCGGCTTCTTCCCGAGGAGGATTTTGTAAATCTCACAAAA +
Preference number: 5 (lower is better)
Translates to: RRGRRRRGRAPSGGC*RRLLPEEDFVNLTK
Trigger: TTTTGTGAGATTTACAAAATCCTCCTCGGGAAGAAGCCGCCGGCAGCAGCCGCCGCTCGGCGCCCGGCCTCGCCGACGCCGCCCTCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000644942.1
ENST00000647188.2
ENST00000647504.1
CDS TCA 90 bp CCTGGGGACTGTGTGTCTCGCAGTCCATGGCCTGCACGGCAGCTGTaGAGTGCCCACCACTGTGCCGATGCTGGTGCGTCGGATCCGACC +
Preference number: 5 (lower is better)
Translates to: PGDCVSRSPWPARQL*SAHHCADAGASDPT
Trigger: GGTCGGATCCGACGCACCAGCATCGGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGGCCATGGACTGCGAGACACACAGTCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS GCA 90 bp GCCTGCACGGCAGCTGTGAAGTGCCCACCACTGTGCCGATGCTGGTaGGTCGGATCCGACCGGGCTCTCCCACTGTTGCTTGTCCCCGAT +
Preference number: 5 (lower is better)
Translates to: ACTAAVKCPPLCRCW*VGSDRALPLLLVPD
Trigger: ATCGGGGACAAGCAACAGTGGGAGAGCCCGGTCGGATCCGACGCACCAGCATCGGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS GCA 90 bp TCGCAGTCCATGGCCTGCACGGCAGCTGTGAAGTGCCCACCACTGTaGCGATGCTGGTGCGTCGGATCCGACCGGGCTCTCCCACTGTTG +
Preference number: 5 (lower is better)
Translates to: SQSMACTAAVKCPPL*RCWCVGSDRALPLL
Trigger: CAACAGTGGGAGAGCCCGGTCGGATCCGACGCACCAGCATCGGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGGCCATGGACTGCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS CCA 90 bp ATGGCCTGCACGGCAGCTGTGAAGTGCCCACCACTGTGCCGATGCTaGTGCGTCGGATCCGACCGGGCTCTCCCACTGTTGCTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: MACTAAVKCPPLCRC*CVGSDRALPLLLVP
Trigger: GGGGACAAGCAACAGTGGGAGAGCCCGGTCGGATCCGACGCACCAGCATCGGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS GCA 90 bp TCCATGGCCTGCACGGCAGCTGTGAAGTGCCCACCACTGTGCCGATaGTGGTGCGTCGGATCCGACCGGGCTCTCCCACTGTTGCTTGTC +
Preference number: 5 (lower is better)
Translates to: SMACTAAVKCPPLCR*WCVGSDRALPLLLV
Trigger: GACAAGCAACAGTGGGAGAGCCCGGTCGGATCCGACGCACCAGCATCGGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGGCCATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS GCA 90 bp ACGTGCGAGCTCACCTGGGGACTGTGTGTCTCGCAGTCCATGGCCTaGACGGCAGCTGTGAAGTGCCCACCACTGTGCCGATGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: TCELTWGLCVSQSMA*TAAVKCPPLCRCWC
Trigger: GCACCAGCATCGGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGGCCATGGACTGCGAGACACACAGTCCCCAGGTGAGCTCGCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CAA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTGCCACACGCCTCTTCTaGCCAGAGTCCTGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSATRLF*PESCLA
Trigger: AGCCAGGCAGGACTCTGGCAAGAAGAGGCGTGTGGC...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCCGGGCTCTCCCACTGTaGCTTGTCCCCGATGAGCCA +
Preference number: 5 (lower is better)
Translates to: APWLGDQSRSILSSCGLCRALPL*LVPDEP
Trigger: TGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCCG...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTCCAGCCTATTTATGTTaGAGAGGCCCAGGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSPAYLC*RGPGWR
Trigger: CCTCCAGCCTGGGCCTCTCAAACATAAATAGGCTGG...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS TCA 90 bp CATCCAGTGCTGCTCCACCTGAGAATGGCAGGTGACACAAGCAAATaGACCACGTGCGAGCTCACCTGGGGACTGTGTGTCTCGCAGTCC +
Preference number: 5 (lower is better)
Translates to: HPVLLHLRMAGDTSK*TTCELTWGLCVSQS
Trigger: GGACTGCGAGACACACAGTCCCCAGGTGAGCTCGCACGTGGTTCATTTGCTTGTGTCACCTGCCATTCTCAGGTGGAGCAGCACTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS TCA 90 bp TGTGGCGCCCGAGACCAGCGTTGGGAAATTAGGCTGGAGCCATCATaGAAACTTTTTCAGGCAGTGCACGCTCGCCTGTGCCTGCCCATC +
Preference number: 5 (lower is better)
Translates to: CGARDQRWEIRLEPS*KLFQAVHARLCLPI
Trigger: GATGGGCAGGCACAGGCGAGCGTGCACTGCCTGAAAAAGTTTTCATGATGGCTCCAGCCTAATTTCCCAACGCTGGTCTCGGGCGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647425.1
CDS TCA 90 bp CCTGGAAGAGACCTGCAGTGGGAGAAGGCGCAAGTAAGCCACAGATaGGCGAGAAGACTCCAGCCCAAGTCTGAACCAACTTCTGACGGC +
Preference number: 5 (lower is better)
Translates to: PGRDLQWEKAQVSHR*ARRLQPKSEPTSDG
Trigger: GCCGTCAGAAGTTGGTTCAGACTTGGGCTGGAGTCTTCTCGCTCATCTGTGGCTTACTTGCGCCTTCTCCCACTGCAGGTCTCTTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646351.1
CDS CCA 90 bp AGAAGACTCCAGCCCAAGTCTGAACCAACTTCTGACGGCCAGGAGTaGACAGACAGAAGGATGGGGCAGTACAGCAGGAGGAAGGCGATC +
Preference number: 5 (lower is better)
Translates to: RRLQPKSEPTSDGQE*TDRRMGQYSRRKAI
Trigger: GATCGCCTTCCTCCTGCTGTACTGCCCCATCCTTCTGTCTGTCCACTCCTGGCCGTCAGAAGTTGGTTCAGACTTGGGCTGGAGTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646351.1
CDS-3UTR CAA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTTGTAACAGACTTTCCTaGGAGTGGGAGCAAAGGGTG +
Preference number: 5 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSCNRLS*EWEQRV
Trigger: CACCCTTTGCTCCCACTCCAAGGAAAGTCTGTTACA...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCCGGGCTCTCCCACTGTaGCTTGTCCCCGATGAGCCA +
Preference number: 5 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFRALPL*LVPDEP
Trigger: TGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCCG...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GGTTACCCAAGGCTTGTTGTCCATGGTGGTGGTGATGGTGGTGGTGGTGGTGATAGCTATGCCAGTCTCTaGGCGGGGATTGGAGTAGAC +
Preference number: 5 (lower is better)
Translates to: GYPRLVVHGGGDGGGGGDSYASL*AGIGVD
Trigger: GTCTACTCCAATCCCCGCCAAGAGACTGGCATAGCT...ATCACCACCACCACCACCATCACCACCACCATGGACAACAAGCCTTGGGTAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CAA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCGCTTCTCAGTGCACCTaGGTTAGGAGACCAGTCACG +
Preference number: 5 (lower is better)
Translates to: APWLGDQSRSILSSCGLCASQCT*VRRPVT
Trigger: CGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAGC...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTAGAGTTCTGCTTTGCTaGCACTCATACTCTGGACCT +
Preference number: 5 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSRVLLC*HSYSGP
Trigger: AGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTCT...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCAAGAGGAGCAGGAAATaGCTGACGCACCTGGGGACT +
Preference number: 5 (lower is better)
Translates to: APWLGDQSRSILSSCGLCKRSRK*LTHLGT
Trigger: AGTCCCCAGGTGCGTCAGCAATTTCCTGCTCCTCTT...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCCGGGTTCCTGGTGGTTaGTACTCCCGTTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: APWLGDQSRSILSSCGLCRVPGG*YSRFPS
Trigger: AGATGGAAAACGGGAGTACAAACCACCAGGAACCCG...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCGGGCTCTCCCACTGTaGCTTGTCCCCGATGAGCCA +
Preference number: 5 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALRALPL*LVPDEP
Trigger: TGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCCG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTCAGAAAATTGGTATGTaGGATGTCCAGCTATGCCAG +
Preference number: 5 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSQKIGM*DVQLCQ
Trigger: CTGGCATAGCTGGACATCCAACATACCAATTTTCTG...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTTTCTCTATCAGCCCCTaGCCTCATTGTCAGATGTCC +
Preference number: 5 (lower is better)
Translates to: LPGHPSAELPHTPSACHFFSISP*PHCQMS
Trigger: GGACATCTGACAATGAGGCAAGGGGCTGATAGAGAA...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTCTGCATCATGAACTTTaGCCACCACTTTGCCTGACC +
Preference number: 5 (lower is better)
Translates to: LPGHPSAELPHTPSACHFLHHEL*PPLCLT
Trigger: GGTCAGGCAAAGTGGTGGCAAAAGTTCATGATGCAG...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCGATCACCTAGCCCAGTaGTTTAAGGCTGCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: APWLGDQSRSILSSCGLCDHLAQ*FKAAVS
Trigger: GCTCACTGCAGCCTTAAACAACTGGGCTAGGTGATC...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS TCA 90 bp CTGTTGGTCACTTATGTTTGGCTGGCGACGGTCACTGTACTGATGTaGATGGGGCATCTGTCCAGCCATCTGAAGGCCAGCAGCATGGAA +
Preference number: 5 (lower is better)
Translates to: LLVTYVWLATVTVLM*MGHLSSHLKASSME
Trigger: TTCCATGCTGCTGGCCTTCAGATGGCTGGACAGATGCCCCATTCACATCAGTACAGTGACCGTCGCCAGCCAAACATAAGTGACCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000426672.6
ENST00000455097.6
ENST00000642309.1
ENST00000643551.1
ENST00000643624.1
ENST00000643854.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS TCA 90 bp GATACGGTCATTCTAAAGGCACCTGGCATCCAGTGCTGCTCCACCTaGGAATGGCAGGTGACACAAGCAAATGAACCACGTGCGAGCTCA +
Preference number: 5 (lower is better)
Translates to: DTVILKAPGIQCCST*EWQVTQANEPRASS
Trigger: TGAGCTCGCACGTGGTTCATTTGCTTGTGTCACCTGCCATTCTCAGGTGGAGCAGCACTGGATGCCAGGTGCCTTTAGAATGACCGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CAA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCGAGACCCCTCGGAAATaGGTGTTTCTCAGCAAGTCA +
Preference number: 5 (lower is better)
Translates to: APWLGDQSRSILSSCGLCETPRK*VFLSKS
Trigger: TGACTTGCTGAGAAACACCAATTTCCGAGGGGTCTC...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTCTCTCCCACTGTTGCTaGTCCCCGATGAGCCACCTG +
Preference number: 5 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAALSHCC*SPMSHL
Trigger: CAGGTGGCTCATCGGGGACAAGCAACAGTGGGAGAG...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GGTTACCCAAGGCTTGTTGTCCATGGTGGTGGTGATGGTGGTGGTGGTGGTGATTTCTCTATCAGCCCCTaGCCTCATTGTCAGATGTCC +
Preference number: 5 (lower is better)
Translates to: GYPRLVVHGGGDGGGGGDFSISP*PHCQMS
Trigger: GGACATCTGACAATGAGGCAAGGGGCTGATAGAGAA...ATCACCACCACCACCACCATCACCACCACCATGGACAACAAGCCTTGGGTAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CAA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGGCCACGACCGACCCGTaGATTGCTTCTCAGTGCACC +
Preference number: 5 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALATTDP*IASQCT
Trigger: GGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGGC...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTGCCACGACCGACCCGTaGATTGCTTCTCAGTGCACC +
Preference number: 5 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAATTDP*IASQCT
Trigger: GGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGGC...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATATGGGTCACGGAAGGTTaGGGGCATCCGCCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIWVTEG*GHPPLV
Trigger: AACCAGAGGCGGATGCCCCAAACCTTCCGTGACCCA...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCTGGGCTCCACTTGTCTaGTCCACTTGTTTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: APWLGDQSRSILSSCGLCWAPLV*STCFLC
Trigger: ACAGAGGAAACAAGTGGACAAGACAAGTGGAGCCCA...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GAAGTGGGAGTGGTGCCTGAAGTGAGCTCCTCCCCACCTCGTGGCATCACCTCTATTCCATTCCCACTGTaGGGAAATAACATGTGCCAT +
Preference number: 5 (lower is better)
Translates to: EVGVVPEVSSSPPRGITSIPFPL*GNNMCH
Trigger: ATGGCACATGTTATTTCCCAACAGTGGGAATGGAAT...AGAGGTGATGCCACGAGGTGGGGAGGAGCTCACTTCAGGCACCACTCCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS TCA 90 bp AACAGGATGAGTTTCAACAGTGACCTGTGTAGGAGCTTCAGTGCCTaGCCAACCAAGAGGAGCAGGAAATTGCTGACGCACCTGGGGACT +
Preference number: 5 (lower is better)
Translates to: NRMSFNSDLCRSFSA*PTKRSRKLLTHLGT
Trigger: AGTCCCCAGGTGCGTCAGCAATTTCCTGCTCCTCTTGGTTGGTCAGGCACTGAAGCTCCTACACAGGTCACTGTTGAAACTCATCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS TCA 90 bp TTGCATATGTTGGCCAAGTTCCTAGGTCAGCCTCATGAAAACTACTaGCTCCAAGAGATGTTCCTGGTCAAGGGCACTGGGGCCGCTGCA +
Preference number: 5 (lower is better)
Translates to: LHMLAKFLGQPHENY*LQEMFLVKGTGAAA
Trigger: TGCAGCGGCCCCAGTGCCCTTGACCAGGAACATCTCTTGGAGTCAGTAGTTTTCATGAGGCTGACCTAGGAACTTGGCCAACATATGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS CCA 90 bp ACAGAAAGTTTTCTCAGGGGAGCAGTTGCTGGGTCACGGAAGGTTTaGGGCATCCGCCTCTGTAACATGACAATATCAGGCATCACCTGG +
Preference number: 5 (lower is better)
Translates to: TESFLRGAVAGSRKV*GIRLCNMTISGITW
Trigger: CCAGGTGATGCCTGATATTGTCATGTTACAGAGGCGGATGCCCCAAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGAAAACTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000426672.6
ENST00000462274.2
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646523.1
CDS-3UTR CAA 90 bp CACTGCAATTTACATTGCACAGAGCGGCAGGGCAAAATGATGAGAATGCCACATCTCTCCCACTGTTGCTaGTCCCCGATGAGCCACCTG +
Preference number: 5 (lower is better)
Translates to: HCNLHCTERQGKMMRMPHLSHCC*SPMSHL
Trigger: CAGGTGGCTCATCGGGGACAAGCAACAGTGGGAGAG...ATGTGGCATTCTCATCATTTTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCCGGTTACCCAAGGCTaGTTGTCCATGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALPVTQG*LSMVVV
Trigger: CACCACCACCATGGACAACAAGCCTTGGGTAACCGG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACCGGTTACCCAAGGCTaGTTGTCCATGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIPVTQG*LSMVVV
Trigger: CACCACCACCATGGACAACAAGCCTTGGGTAACCGG...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTATGGGTCACGGAAGGTTaGGGGCATCCGCCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLWVTEG*GHPPLV
Trigger: AACCAGAGGCGGATGCCCCAAACCTTCCGTGACCCA...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCCAAATCAGCGTCCAGTaGGAGAAACACTTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: APWLGDQSRSILSSCGLCQISVQ*EKHFVS
Trigger: GGAGACAAAGTGTTTCTCCAACTGGACGCTGATTTG...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAGCCCGGCACACCTGCTaGGCTGCTTCCTGGCCACCC +
Preference number: 5 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKARHTC*AASWPP
Trigger: GGGTGGCCAGGAAGCAGCCAAGCAGGTGTGCCGGGC...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTAATGACCTGGGGACCTaGTTCAAATGCAGATTCTCA +
Preference number: 5 (lower is better)
Translates to: LPGHPSAELPHTPSACHFNDLGT*FKCRFS
Trigger: TGAGAATCTGCATTTGAACAAGGTCCCCAGGTCATT...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS TCA 90 bp GCACGTCGCCCACCAGGTCCTCCTGTTTCCACTCCAAGAATGTTATaGAGTTTACGGGTTCCTGGTGGTTTGTACTCCCGTTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: ARRPPGPPVSTPRML*SLRVPGGLYSRFPS
Trigger: AGATGGAAAACGGGAGTACAAACCACCAGGAACCCGTAAACTTCATAACATTCTTGGAGTGGAAACAGGAGGACCTGGTGGGCGACGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000643624.1
ENST00000644367.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646224.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS TCA 90 bp TGGGAGAAAAAGCCAGGGAACAACCCCCAGCTTTCCAAAGCCTCCTaGAAAGTGAGTGGACTCCCACTGCACCACCTGAACATGGTAATT +
Preference number: 5 (lower is better)
Translates to: WEKKPGNNPQLSKAS*KVSGLPLHHLNMVI
Trigger: AATTACCATGTTCAGGTGGTGCAGTGGGAGTCCACTCACTTTTCAGGAGGCTTTGGAAAGCTGGGGGTTGTTCCCTGGCTTTTTCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462274.2
CDS-3UTR CAA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTCTCAGGGGAGCAGTaGCTGGGTCACGGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAFSGEQ*LGHGRF
Trigger: AAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGAA...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGTTCTCAGGGGAGCAGTaGCTGGGTCACGGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALFSGEQ*LGHGRF
Trigger: AAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGAA...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCTCTCCCACTGTTGCTaGTCCCCGATGAGCCACCTG +
Preference number: 5 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHLSHCC*SPMSHL
Trigger: CAGGTGGCTCATCGGGGACAAGCAACAGTGGGAGAG...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTCGGGCTCTCCCACTGTaGCTTGTCCCCGATGAGCCA +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTRALPL*LVPDEP
Trigger: TGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCCG...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTCGGGCTCTCCCACTGTaGCTTGTCCCCGATGAGCCA +
Preference number: 5 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFRALPL*LVPDEP
Trigger: TGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCCG...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATAGAGAATTGTAGACCCTaGGCCTGGTCCGGTTACCCA +
Preference number: 5 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIENCRP*AWSGYP
Trigger: TGGGTAACCGGACCAGGCCAAGGGTCTACAATTCTC...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTGAGAATTGTAGACCCTaGGCCTGGTCCGGTTACCCA +
Preference number: 5 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAENCRP*AWSGYP
Trigger: TGGGTAACCGGACCAGGCCAAGGGTCTACAATTCTC...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTCAGCCCCTTGCCTCATaGTCAGATGTCCTTCAGTCA +
Preference number: 5 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSQPLAS*SDVLQS
Trigger: TGACTGAAGGACATCTGACAATGAGGCAAGGGGCTG...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATAGCTTCTCAGTGCACCTaGGTTAGGAGACCAGTCACG +
Preference number: 5 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIASQCT*VRRPVT
Trigger: CGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAGC...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACGCCACGACCGACCCGTaGATTGCTTCTCAGTGCACC +
Preference number: 5 (lower is better)
Translates to: EDTSELSMKMGLDMALLNATTDP*IASQCT
Trigger: GGTGCACTGAGAAGCAATCAACGGGTCGGTCGTGGC...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCACTTTTGCCACCACTTaGCCTGACCCAAACTTAATG +
Preference number: 5 (lower is better)
Translates to: APWLGDQSRSILSSCGLCTFATT*PDPNLM
Trigger: CATTAAGTTTGGGTCAGGCAAAGTGGTGGCAAAAGT...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAGCCCGGCACACCTGCTaGGCTGCTTCCTGGCCACCC +
Preference number: 5 (lower is better)
Translates to: RTRLVCDVHKNALSHAISARHTC*AASWPP
Trigger: GGGTGGCCAGGAAGCAGCCAAGCAGGTGTGCCGGGC...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTATTCCATTCCCACTGTaGGGAAATAACATGTGCCAT +
Preference number: 5 (lower is better)
Translates to: LPGHPSAELPHTPSACHFIPFPL*GNNMCH
Trigger: ATGGCACATGTTATTTCCCAACAGTGGGAATGGAAT...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS TCA 90 bp GCACGTCGCCCACCAGGTCCTCCTGTTTCCACTCCAAGAATGTTATaGAGTTTACGGGTTCCTGGTGGTTTGTACTCCTGTAAGAGAGAA +
Preference number: 5 (lower is better)
Translates to: ARRPPGPPVSTPRML*SLRVPGGLYSCKRE
Trigger: TTCTCTCTTACAGGAGTACAAACCACCAGGAACCCGTAAACTTCATAACATTCTTGGAGTGGAAACAGGAGGACCTGGTGGGCGACGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646351.1
CDS-3UTR CAA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTGTTGGTCACTTATGTTaGGCTGGCGACGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAVGHLC*AGDGHC
Trigger: ACAGTGACCGTCGCCAGCCAAACATAAGTGACCAAC...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATAGTTGGTCACTTATGTTaGGCTGGCGACGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIVGHLC*AGDGHC
Trigger: ACAGTGACCGTCGCCAGCCAAACATAAGTGACCAAC...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGATTCTCAGGGGAGCAGTaGCTGGGTCACGGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRFSGEQ*LGHGRF
Trigger: AAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGAA...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAGTCTCCCTGGCCCTGTaGGTGTCTTCGCTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTVSLAL*VSSLLF
Trigger: AAAAAGAAGCGAAGACACCAACAGGGCCAGGGAGAC...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGGTCTCCCTGGCCCTGTaGGTGTCTTCGCTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALVSLAL*VSSLLF
Trigger: AAAAAGAAGCGAAGACACCAACAGGGCCAGGGAGAC...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATAATGGCAACCCATTCTaGCTCCACACGATCATATGC +
Preference number: 5 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHNGNPF*LHTIIC
Trigger: GCATATGATCGTGTGGAGCAAGAATGGGTTGCCATT...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCGAGACCCCTCGGAAATaGGTGTTTCTCAGCAAGTCA +
Preference number: 5 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFETPRK*VFLSKS
Trigger: TGACTTGCTGAGAAACACCAATTTCCGAGGGGTCTC...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GCACCTTGGTTAGGAGACCAGTCACGTTCCATCCTATCTTCCTGTGGCCTCTGCTTGATTGCACTGCGTTaGGGGTTACAAAGAAGGATA +
Preference number: 5 (lower is better)
Translates to: APWLGDQSRSILSSCGLCLIALR*GLQRRI
Trigger: TATCCTTCTTTGTAACCCCAAACGCAGTGCAATCAA...GCAGAGGCCACAGGAAGATAGGATGGAACGTGACTGGTCTCCTAACCAAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCGGGTTCCTGGTGGTTaGTACTCCCGTTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALRVPGG*YSRFPS
Trigger: AGATGGAAAACGGGAGTACAAACCACCAGGAACCCG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCACGGGTTCCTGGTGGTTaGTACTCCCGTTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPRVPGG*YSRFPS
Trigger: AGATGGAAAACGGGAGTACAAACCACCAGGAACCCG...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GGTTACCCAAGGCTTGTTGTCCATGGTGGTGGTGATGGTGGTGGTGGTGGTGATCAGAGCATAATAAGGTaGAATTCGAGTTTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: GYPRLVVHGGGDGGGGGDQSIIR*NSSFGV
Trigger: GACCCCAAAACTCGAATTCAACCTTATTATGCTCTG...ATCACCACCACCACCACCATCACCACCACCATGGACAACAAGCCTTGGGTAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CAA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACATGAGCCACCTGAGCTaGACGATGTACTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDMSHLS*TMYWRW
Trigger: CCACCTCCAGTACATCGTCAAGCTCAGGTGGCTCAT...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTCTCTCCCACTGTTGCTaGTCCCCGATGAGCCACCTG +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPLSHCC*SPMSHL
Trigger: CAGGTGGCTCATCGGGGACAAGCAACAGTGGGAGAG...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTCTCTCCCACTGTTGCTaGTCCCCGATGAGCCACCTG +
Preference number: 5 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFLSHCC*SPMSHL
Trigger: CAGGTGGCTCATCGGGGACAAGCAACAGTGGGAGAG...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTCGGGCTCTCCCACTGTaGCTTGTCCCCGATGAGCCA +
Preference number: 5 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSRALPL*LVPDEP
Trigger: TGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCCG...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCGGGCTCTCCCACTGTaGCTTGTCCCCGATGAGCCA +
Preference number: 5 (lower is better)
Translates to: VIASEMVGSSNFESKSIRRALPL*LVPDEP
Trigger: TGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCCG...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACCCGGTTACCCAAGGCTaGTTGTCCATGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: EDTSELSMKMGLDMALLNPVTQG*LSMVVV
Trigger: CACCACCACCATGGACAACAAGCCTTGGGTAACCGG...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCGAGAATTGTAGACCCTaGGCCTGGTCCGGTTACCCA +
Preference number: 5 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSENCRP*AWSGYP
Trigger: TGGGTAACCGGACCAGGCCAAGGGTCTACAATTCTC...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGGTAGGCCTGATTGCCTaGGTTACCAGTAGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALVGLIA*VTSRGG
Trigger: TCCTCCTCTACTGGTAACCAAGGCAATCAGGCCTAC...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGAAGCTATGCCAGTCTCTaGGCGGGGATTGGAGTAGAC +
Preference number: 5 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRSYASL*AGIGVD
Trigger: GTCTACTCCAATCCCCGCCAAGAGACTGGCATAGCT...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTTGTATTAGCAGAAAATaGGTATGTTGGATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LPGHPSAELPHTPSACHFCISRK*VCWMSS
Trigger: GCTGGACATCCAACATACCAATTTTCTGCTAATACA...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTCAGCCCCTTGCCTCATaGTCAGATGTCCTTCAGTCA +
Preference number: 5 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAQPLAS*SDVLQS
Trigger: TGACTGAAGGACATCTGACAATGAGGCAAGGGGCTG...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCAGCCCCTTGCCTCATaGTCAGATGTCCTTCAGTCA +
Preference number: 5 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALQPLAS*SDVLQS
Trigger: TGACTGAAGGACATCTGACAATGAGGCAAGGGGCTG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAGCTTCTCAGTGCACCTaGGTTAGGAGACCAGTCACG +
Preference number: 5 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGASQCT*VRRPVT
Trigger: CGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAGC...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAAAGAGGAGCAGGAAATaGCTGACGCACCTGGGGACT +
Preference number: 5 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGKRSRK*LTHLGT
Trigger: AGTCCCCAGGTGCGTCAGCAATTTCCTGCTCCTCTT...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACAAGAGGAGCAGGAAATaGCTGACGCACCTGGGGACT +
Preference number: 5 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDKRSRK*LTHLGT
Trigger: AGTCCCCAGGTGCGTCAGCAATTTCCTGCTCCTCTT...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTGGGTCACGGAAGGTTaGGGGCATCCGCCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTWVTEG*GHPPLV
Trigger: AACCAGAGGCGGATGCCCCAAACCTTCCGTGACCCA...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643624.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCTGTAGTTTCACCATGTaGGCCAGGCAGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFCSFTM*ARQVSN
Trigger: GTTTGAGACCTGCCTGGCCAACATGGTGAAACTACA...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS GCA 90 bp CTACTGACTCCAAGAGATGTTCCTGGTCAAGGGCACTGGGGCCGCTaGAGAAGAAATACCAAAACTTCTTCAATTCTACATCCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: LLTPRDVPGQGHWGR*RRNTKTSSILHPPD
Trigger: GTCTGGAGGATGTAGAATTGAAGAAGTTTTGGTATTTCTTCTGCAGCGGCCCCAGTGCCCTTGACCAGGAACATCTCTTGGAGTCAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS-3UTR CAA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTAGTCTCCCTGGCCCTGTaGGTGTCTTCGCTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLVSLAL*VSSLLF
Trigger: AAAAAGAAGCGAAGACACCAACAGGGCCAGGGAGAC...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCGGGTTCCTGGTGGTTaGTACTCCCGTTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSRVPGG*YSRFPS
Trigger: AGATGGAAAACGGGAGTACAAACCACCAGGAACCCG...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACATGAGCCACCTGAGCTaGACGATGTACTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: EDTSELSMKMGLDMALLNMSHLS*TMYWRW
Trigger: CCACCTCCAGTACATCGTCAAGCTCAGGTGGCTCAT...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCACTCTCCCACTGTTGCTaGTCCCCGATGAGCCACCTG +
Preference number: 5 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSLSHCC*SPMSHL
Trigger: CAGGTGGCTCATCGGGGACAAGCAACAGTGGGAGAG...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTCTCTCCCACTGTTGCTaGTCCCCGATGAGCCACCTG +
Preference number: 5 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSLSHCC*SPMSHL
Trigger: CAGGTGGCTCATCGGGGACAAGCAACAGTGGGAGAG...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACAGCTATGCCAGTCTCTaGGCGGGGATTGGAGTAGAC +
Preference number: 5 (lower is better)
Translates to: EDTSELSMKMGLDMALLNSYASL*AGIGVD
Trigger: GTCTACTCCAATCCCCGCCAAGAGACTGGCATAGCT...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATCATGTAATTGCTGCTTaGCTCCTCAGTAGGTTCAGA +
Preference number: 5 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHHVIAA*LLSRFR
Trigger: TCTGAACCTACTGAGGAGCAAAGCAGCAATTACATG...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCCATGTAATTGCTGCTTaGCTCCTCAGTAGGTTCAGA +
Preference number: 5 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCHVIAA*LLSRFR
Trigger: TCTGAACCTACTGAGGAGCAAAGCAGCAATTACATG...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCATGGGTCACGGAAGGTTaGGGGCATCCGCCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSWVTEG*GHPPLV
Trigger: AACCAGAGGCGGATGCCCCAAACCTTCCGTGACCCA...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTACTTGTCTTGTCCACTaGTTTCCTCTGTCCTGCATC +
Preference number: 5 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSTCLVH*FPLSCI
Trigger: GATGCAGGACAGAGGAAACAAGTGGACAAGACAAGT...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAGATCACCTAGCCCAGTaGTTTAAGGCTGCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGDHLAQ*FKAAVS
Trigger: GCTCACTGCAGCCTTAAACAACTGGGCTAGGTGATC...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCATTTCTTTCCTGGATTaGCGGGCAATGGAAGTGGGA +
Preference number: 5 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFISFLD*RAMEVG
Trigger: TCCCACTTCCATTGCCCGCAAATCCAGGAAAGAAAT...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATTTACCGTTTTGCTTCTaGCATCTAGTCACTGCTAGC +
Preference number: 5 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHLPFCF*HLVTAS
Trigger: GCTAGCAGTGACTAGATGCAAGAAGCAAAACGGTAA...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACGAGAATGACCAGAAATaGGCCATTCCCAGGCCCGAC +
Preference number: 5 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHENDQK*AIPRPD
Trigger: GTCGGGCCTGGGAATGGCCAATTTCTGGTCATTCTC...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CTTCCTGGCCACCCTAGTGCAGAACTACCACACACACCCAGTGCCTGCCACTTTAACACTGTTTTTATCTaGTGGTTTAGGCTGAATTCC +
Preference number: 5 (lower is better)
Translates to: LPGHPSAELPHTPSACHFNTVFI*WFRLNS
Trigger: GGAATTCAGCCTAAACCACAAGATAAAAACAGTGTT...AAAGTGGCAGGCACTGGGTGTGTGTGGTAGTTCTGCACTAGGGTGGCCAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS GCA 90 bp CTAAGTTCTGGAGTCGCAAGGAAAAGCAGTGCAGTGCACATCTGTTaGGCAAACTTTCGTGTTAGGTTCAAAGAGACCCCTCGGAAATTG +
Preference number: 5 (lower is better)
Translates to: LSSGVARKSSAVHIC*ANFRVRFKETPRKL
Trigger: CAATTTCCGAGGGGTCTCTTTGAACCTAACACGAAAGTTTGCGCAACAGATGTGCACTGCACTGCTTTTCCTTGCGACTCCAGAACTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644367.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646224.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS GCA 90 bp AAGCTGATGAAGAGACTGGGGAGGAGCCTGAGATCTTGTTGCAGATaGCCCAAAAATGGTTCCACAACCACTAAGAACATACTAGCTCAC +
Preference number: 5 (lower is better)
Translates to: KLMKRLGRSLRSCCR*PKNGSTTTKNILAH
Trigger: GTGAGCTAGTATGTTCTTAGTGGTTGTGGAACCATTTTTGGGGCATCTGCAACAAGATCTCAGGCTCCTCCCCAGTCTCTTCATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643355.1
CDS-3UTR CAA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTCGAACAGATGAAGGTTaGCATGCTGAAGTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAARTDEG*HAEVSP
Trigger: AGGAGAGACTTCAGCATGCAAACCTTCATCTGTTCG...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACGTTGGTCACTTATGTTaGGCTGGCGACGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: EDTSELSMKMGLDMALLNVGHLC*AGDGHC
Trigger: ACAGTGACCGTCGCCAGCCAAACATAAGTGACCAAC...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACGTTGGTCACTTATGTTaGGCTGGCGACGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHVGHLC*AGDGHC
Trigger: ACAGTGACCGTCGCCAGCCAAACATAAGTGACCAAC...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTCTCAGGGGAGCAGTaGCTGGGTCACGGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPFSGEQ*LGHGRF
Trigger: AAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGAA...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CAGCTGAAGATGGTGTTTGTGGAAGCTGGAGGTCCCTCTTCCTTACAGTACTGCTTGATTGCACTGCGTTaGGGGTTACAAAGAAGGATA +
Preference number: 5 (lower is better)
Translates to: QLKMVFVEAGGPSSLQYCLIALR*GLQRRI
Trigger: TATCCTTCTTTGTAACCCCAAACGCAGTGCAATCAA...GCAGTACTGTAAGGAAGAGGGACCTCCAGCTTCCACAAACACCATCTTCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCCAAAGTCAACTATCTaGATTGCACTGCGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALPKSTI*IALRLG
Trigger: CCCCAAACGCAGTGCAATCAAGATAGTTGACTTTGG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACCAAAGTCAACTATCTaGATTGCACTGCGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIPKSTI*IALRLG
Trigger: CCCCAAACGCAGTGCAATCAAGATAGTTGACTTTGG...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCACCAAAGTCAACTATCTaGATTGCACTGCGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPPKSTI*IALRLG
Trigger: CCCCAAACGCAGTGCAATCAAGATAGTTGACTTTGG...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCATGAGCCACCTGAGCTaGACGATGTACTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFMSHLS*TMYWRW
Trigger: CCACCTCCAGTACATCGTCAAGCTCAGGTGGCTCAT...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCCGGTTACCCAAGGCTaGTTGTCCATGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLPVTQG*LSMVVV
Trigger: CACCACCACCATGGACAACAAGCCTTGGGTAACCGG...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGAGAATTGTAGACCCTaGGCCTGGTCCGGTTACCCA +
Preference number: 5 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFENCRP*AWSGYP
Trigger: TGGGTAACCGGACCAGGCCAAGGGTCTACAATTCTC...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTGAGAATTGTAGACCCTaGGCCTGGTCCGGTTACCCA +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTENCRP*AWSGYP
Trigger: TGGGTAACCGGACCAGGCCAAGGGTCTACAATTCTC...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACGTAGGCCTGATTGCCTaGGTTACCAGTAGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: EDTSELSMKMGLDMALLNVGLIA*VTSRGG
Trigger: TCCTCCTCTACTGGTAACCAAGGCAATCAGGCCTAC...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGACATACTCTGGACCTGTaGGTGCAATCAAGGTCTTGC +
Preference number: 5 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGHTLDL*VQSRSC
Trigger: GCAAGACCTTGATTGCACCAACAGGTCCAGAGTATG...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCACATGAGAGTTCTGCTTaGCTTGCACTCATACTCTGG +
Preference number: 5 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPHESSA*LALILW
Trigger: CCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCATG...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTCATGAGAGTTCTGCTTaGCTTGCACTCATACTCTGG +
Preference number: 5 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAHESSA*LALILW
Trigger: CCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCATG...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTAAGAGGAGCAGGAAATaGCTGACGCACCTGGGGACT +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPKRSRK*LTHLGT
Trigger: AGTCCCCAGGTGCGTCAGCAATTTCCTGCTCCTCTT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTCAAATCAGCGTCCAGTaGGAGAAACACTTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAAQISVQ*EKHFVS
Trigger: GGAGACAAAGTGTTTCTCCAACTGGACGCTGATTTG...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTCTCAGGCCCGTCCTCTaGCCTGGGTGTTCATTAACA +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTLRPVL*PGCSLT
Trigger: TGTTAATGAACACCCAGGCAAGAGGACGGGCCTGAG...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAGCCACACGCCTCTTCTaGCCAGAGTCCTGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: RTRLVCDVHKNALSHAISATRLF*PESCLA
Trigger: AGCCAGGCAGGACTCTGGCAAGAAGAGGCGTGTGGC...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GAGGGTACCTTGCTGATGCCTAATCTGCAATGGGCAGGAAACAGAAGCCAAAGTTTACCGTTTTGCTTCTaGCATCTAGTCACTGCTAGC +
Preference number: 5 (lower is better)
Translates to: EGTLLMPNLQWAGNRSQSLPFCF*HLVTAS
Trigger: GCTAGCAGTGACTAGATGCAAGAAGCAAAACGGTAA...ACTTTGGCTTCTGTTTCCTGCCCATTGCAGATTAGGCATCAGCAAGGTACCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCTGTCCCAAGACCGTTaGCTGGTAAGACATTCTTCT +
Preference number: 5 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALLSQDR*LVRHSS
Trigger: AGAAGAATGTCTTACCAGCAAACGGTCTTGGGACAG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp AAGCCTCCTCACCTTCGAATGGCCTGTTGTCTTCTCCTAGATTCTAGGGCATTCAATGACCTGGGGACCTaGTTCAAATGCAGATTCTCA +
Preference number: 5 (lower is better)
Translates to: KPPHLRMACCLLLDSRAFNDLGT*FKCRFS
Trigger: TGAGAATCTGCATTTGAACAAGGTCCCCAGGTCATT...GAATGCCCTAGAATCTAGGAGAAGACAACAGGCCATTCGAAGGTGAGGAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTACCCTACTTCCACCTTaGTTCAGGGTCCTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPTLLPP*FRVLES
Trigger: GCTCTCCAGGACCCTGAACAAAGGTGGAAGTAGGGT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCTCACTGCAATTTACATaGCACAGAGCGGCAGGGCAA +
Preference number: 5 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSSLQFT*HRAAGQ
Trigger: TTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTGA...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGATCACTGCAATTTACATaGCACAGAGCGGCAGGGCAA +
Preference number: 5 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGSLQFT*HRAAGQ
Trigger: TTGCCCTGCCGCTCTGTGCAATGTAAATTGCAGTGA...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACCGAACAGATGAAGGTTaGCATGCTGAAGTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDRTDEG*HAEVSP
Trigger: AGGAGAGACTTCAGCATGCAAACCTTCATCTGTTCG...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGTTCTCAGGGGAGCAGTaGCTGGGTCACGGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLFSGEQ*LGHGRF
Trigger: AAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGAA...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTTTCTCAGGGGAGCAGTaGCTGGGTCACGGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSFSGEQ*LGHGRF
Trigger: AAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGAA...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTGTCTCCCTGGCCCTGTaGGTGTCTTCGCTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTVSLAL*VSSLLF
Trigger: AAAAAGAAGCGAAGACACCAACAGGGCCAGGGAGAC...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGAAATGGCAACCCATTCTaGCTCCACACGATCATATGC +
Preference number: 5 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGNGNPF*LHTIIC
Trigger: GCATATGATCGTGTGGAGCAAGAATGGGTTGCCATT...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTCGGGTTCCTGGTGGTTaGTACTCCCGTTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFRVPGG*YSRFPS
Trigger: AGATGGAAAACGGGAGTACAAACCACCAGGAACCCG...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTCGGGTTCCTGGTGGTTaGTACTCCCGTTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTRVPGG*YSRFPS
Trigger: AGATGGAAAACGGGAGTACAAACCACCAGGAACCCG...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGATGAGCCACCTGAGCTaGACGATGTACTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLMSHLS*TMYWRW
Trigger: CCACCTCCAGTACATCGTCAAGCTCAGGTGGCTCAT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTGTTACCCAAGGCTTGTaGTCCATGGTGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTVTQGL*SMVVVM
Trigger: CATCACCACCACCATGGACAACAAGCCTTGGGTAAC...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTGTTACCCAAGGCTTGTaGTCCATGGTGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPVTQGL*SMVVVM
Trigger: CATCACCACCACCATGGACAACAAGCCTTGGGTAAC...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGTTACCCAAGGCTTGTaGTCCATGGTGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFVTQGL*SMVVVM
Trigger: CATCACCACCACCATGGACAACAAGCCTTGGGTAAC...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGGAGAATTGTAGACCCTaGGCCTGGTCCGGTTACCCA +
Preference number: 5 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLENCRP*AWSGYP
Trigger: TGGGTAACCGGACCAGGCCAAGGGTCTACAATTCTC...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTAACCTCCATAGAATCTaGGGTAGAGGAGCTATTCGT +
Preference number: 5 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAANLHRI*GRGAIR
Trigger: ACGAATAGCTCCTCTACCCAAGATTCTATGGAGGTT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCGTAGGCCTGATTGCCTaGGTTACCAGTAGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFVGLIA*VTSRGG
Trigger: TCCTCCTCTACTGGTAACCAAGGCAATCAGGCCTAC...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGTAGGCCTGATTGCCTaGGTTACCAGTAGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFVGLIA*VTSRGG
Trigger: TCCTCCTCTACTGGTAACCAAGGCAATCAGGCCTAC...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTAGCTATGCCAGTCTCTaGGCGGGGATTGGAGTAGAC +
Preference number: 5 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSSYASL*AGIGVD
Trigger: GTCTACTCCAATCCCCGCCAAGAGACTGGCATAGCT...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGAGCTATGCCAGTCTCTaGGCGGGGATTGGAGTAGAC +
Preference number: 5 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLSYASL*AGIGVD
Trigger: GTCTACTCCAATCCCCGCCAAGAGACTGGCATAGCT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCAGAAAATTGGTATGTaGGATGTCCAGCTATGCCAG +
Preference number: 5 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALQKIGM*DVQLCQ
Trigger: CTGGCATAGCTGGACATCCAACATACCAATTTTCTG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTCAGCCCCTTGCCTCATaGTCAGATGTCCTTCAGTCA +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPQPLAS*SDVLQS
Trigger: TGACTGAAGGACATCTGACAATGAGGCAAGGGGCTG...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTCAGCCCCTTGCCTCATaGTCAGATGTCCTTCAGTCA +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTQPLAS*SDVLQS
Trigger: TGACTGAAGGACATCTGACAATGAGGCAAGGGGCTG...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCATGAGAGTTCTGCTTaGCTTGCACTCATACTCTGG +
Preference number: 5 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSHESSA*LALILW
Trigger: CCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCATG...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTAAGAGGAGCAGGAAATaGCTGACGCACCTGGGGACT +
Preference number: 5 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSKRSRK*LTHLGT
Trigger: AGTCCCCAGGTGCGTCAGCAATTTCCTGCTCCTCTT...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATATGCCTCCTCTATGCTTaGAAGAAGGATTCACAGGTT +
Preference number: 5 (lower is better)
Translates to: HSACLLCLTNFTTTVPFICLLYA*KKDSQV
Trigger: AACCTGTGAATCCTTCTTCAAAGCATAGAGGAGGCA...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGACATTTCAAGATGTTCTaGGGGCTGGGTGAAGTAGCT +
Preference number: 5 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGHFKMF*GLGEVA
Trigger: AGCTACTTCACCCAGCCCCAAGAACATCTTGAAATG...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAAACCACCACTCAATaGGAATACAGTAGCAGTCCT +
Preference number: 5 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIQTTTQ*EYSSSP
Trigger: AGGACTGCTACTGTATTCCAATTGAGTGGTGGTTTG...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATAGGAAATTTACCGTTTaGCTTCTTGCATCTAGTCAC +
Preference number: 5 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHRKFTV*LLASSH
Trigger: GTGACTAGATGCAAGAAGCAAAACGGTAAATTTCCT...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGGAGAATGACCAGAAATaGGCCATTCCCAGGCCCGAC +
Preference number: 5 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLENDQK*AIPRPD
Trigger: GTCGGGCCTGGGAATGGCCAATTTCTGGTCATTCTC...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATATTGCATCACTCAGACTaGATTCTTCAGAGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: HSACLLCLTNFTTTVPFILHHSD*ILQSFL
Trigger: CAGGAAGCTCTGAAGAATCAAGTCTGAGTGATGCAA...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTGTTGGTCACTTATGTTaGGCTGGCGACGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSVGHLC*AGDGHC
Trigger: ACAGTGACCGTCGCCAGCCAAACATAAGTGACCAAC...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTTTCTCAGGGGAGCAGTaGCTGGGTCACGGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSFSGEQ*LGHGRF
Trigger: AAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGAA...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACATGTCCAAAGGAACCTTaGCCTATCAAGGAGTCAATT +
Preference number: 5 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTCPKEP*PIKESI
Trigger: AATTGACTCCTTGATAGGCAAAGGTTCCTTTGGACA...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGTGTCCAAAGGAACCTTaGCCTATCAAGGAGTCAATT +
Preference number: 5 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALCPKEP*PIKESI
Trigger: AATTGACTCCTTGATAGGCAAAGGTTCCTTTGGACA...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGAGACCCCTCGGAAATaGGTGTTTCTCAGCAAGTCA +
Preference number: 5 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFETPRK*VFLSKS
Trigger: TGACTTGCTGAGAAACACCAATTTCCGAGGGGTCTC...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGATTGCACTGCGTTaGGGGTTACAAAGAAGGATA +
Preference number: 5 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAALIALR*GLQRRI
Trigger: TATCCTTCTTTGTAACCCCAAACGCAGTGCAATCAA...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGATCTTGCTTTTGGTGCTaGGTCAAGAATATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRSCFWC*VKNMSR
Trigger: CCTGCTCATATTCTTGACCAAGCACCAAAAGCAAGA...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCAGAGCATAATAAGGTaGAATTCGAGTTTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALQSIIR*NSSFGV
Trigger: GACCCCAAAACTCGAATTCAACCTTATTATGCTCTG...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAATGAGCCACCTGAGCTaGACGATGTACTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKMSHLS*TMYWRW
Trigger: CCACCTCCAGTACATCGTCAAGCTCAGGTGGCTCAT...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTATGAGCCACCTGAGCTaGACGATGTACTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSMSHLS*TMYWRW
Trigger: CCACCTCCAGTACATCGTCAAGCTCAGGTGGCTCAT...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCAAGAGGAGCAGGAAATaGCTGACGCACATTTCCTTA +
Preference number: 5 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSKRSRK*LTHISL
Trigger: TAAGGAAATGTGCGTCAGCAATTTCCTGCTCCTCTT...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CAA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGGTTACCCAAGGCTTGTaGTCCATGGTGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLVTQGL*SMVVVM
Trigger: CATCACCACCACCATGGACAACAAGCCTTGGGTAAC...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGGTTACCCAAGGCTTGTaGTCCATGGTGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: VIASEMVGSSNFESKSIRVTQGL*SMVVVM
Trigger: CATCACCACCACCATGGACAACAAGCCTTGGGTAAC...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTAAACCTCCATAGAATCTaGGGTAGAGGAGCTATTCGT +
Preference number: 5 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLNLHRI*GRGAIR
Trigger: ACGAATAGCTCCTCTACCCAAGATTCTATGGAGGTT...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAAACCTCCATAGAATCTaGGGTAGAGGAGCTATTCGT +
Preference number: 5 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAENLHRI*GRGAIR
Trigger: ACGAATAGCTCCTCTACCCAAGATTCTATGGAGGTT...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTGTAGGCCTGATTGCCTaGGTTACCAGTAGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSVGLIA*VTSRGG
Trigger: TCCTCCTCTACTGGTAACCAAGGCAATCAGGCCTAC...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGACAGAAAATTGGTATGTaGGATGTCCAGCTATGCCAG +
Preference number: 5 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGQKIGM*DVQLCQ
Trigger: CTGGCATAGCTGGACATCCAACATACCAATTTTCTG...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTCAGCCCCTTGCCTCATaGTCAGATGTCCTTCAGTCA +
Preference number: 5 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSQPLAS*SDVLQS
Trigger: TGACTGAAGGACATCTGACAATGAGGCAAGGGGCTG...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTCTCTATCAGCCCCTaGCCTCATTGTCAGATGTCC +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPFSISP*PHCQMS
Trigger: GGACATCTGACAATGAGGCAAGGGGCTGATAGAGAA...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGCATACTCTGGACCTGTaGGTGCAATCAAGGTCTTGC +
Preference number: 5 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKHTLDL*VQSRSC
Trigger: GCAAGACCTTGATTGCACCAACAGGTCCAGAGTATG...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GTTCCATTCAGGCTGTGGACTCCGCTGTTTAGCCGCATATTATATTTATCGGACCCAAAATCTGGGACCTaGGCTATGCATAATGCCAAA +
Preference number: 5 (lower is better)
Translates to: VPFRLWTPLFSRILYLSDPKSGT*AMHNAK
Trigger: TTTGGCATTATGCATAGCCAAGGTCCCAGATTTTGG...GTCCGATAAATATAATATGCGGCTAAACAGCGGAGTCCACAGCCTGAATGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTGTCTTGTCCACTaGTTTCCTCTGTCCTGCATC +
Preference number: 5 (lower is better)
Translates to: EDTSELSMKMGLDMALLNTCLVH*FPLSCI
Trigger: GATGCAGGACAGAGGAAACAAGTGGACAAGACAAGT...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGACCAGCCTATTTATGTTaGAGAGGCCCAGGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRPAYLC*RGPGWR
Trigger: CCTCCAGCCTGGGCCTCTCAAACATAAATAGGCTGG...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAGATGGTGTTTGTGGACAAACCACCACTCAATaGGAATACAGTAGCAGTCCT +
Preference number: 5 (lower is better)
Translates to: DKLHHNRPFHTAEDGVCGQTTTQ*EYSSSP
Trigger: AGGACTGCTACTGTATTCCAATTGAGTGGTGGTTTG...TCCACAAACACCATCTTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAAATGTGACATGCTTTTaGTCCTCATCCCTAAGACCT +
Preference number: 5 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTNVTCF*SSSLRP
Trigger: AGGTCTTAGGGATGAGGACAAAAAGCATGTCACATT...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACACTGTCGCTGGTCAGTaGTGTCATCTTCTGCAAGTT +
Preference number: 5 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHTVAGQ*CHLLQV
Trigger: AACTTGCAGAAGATGACACAACTGACCAGCGACAGT...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTATTGCATCACTCAGACTaGATTCTTCAGAGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLLHHSD*ILQSFL
Trigger: CAGGAAGCTCTGAAGAATCAAGTCTGAGTGATGCAA...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGAACCCTACTTCCACCTTaGTTCAGGGTCCTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRTLLPP*FRVLES
Trigger: GCTCTCCAGGACCCTGAACAAAGGTGGAAGTAGGGT...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGCAGCAGGAAAGCAGGTaGATGCTTCAGGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKQQESR*MLQGDK
Trigger: TTTGTCTCCCTGAAGCATCAACCTGCTTTCCTGCTG...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACAAACAGGAGGGTACCTaGCTGATGCCTAATCTGCAA +
Preference number: 5 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHKQEGT*LMPNLQ
Trigger: TTGCAGATTAGGCATCAGCAAGGTACCCTCCTGTTT...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACCATGTCATTGCACTTaGCTGCCTAATTCAGTAACA +
Preference number: 5 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTPCHCT*LPNSVT
Trigger: TGTTACTGAATTAGGCAGCAAAGTGCAATGACATGG...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TCAGCTGGAAAGCAATGCTGTTTAGCCCTCCACGGAGAACACTGTCCACCTCATGCTTTGAAAATACTTTaGCCAGTAGTTGTTCCACAT +
Preference number: 5 (lower is better)
Translates to: SAGKQCCLALHGEHCPPHALKIL*PVVVPH
Trigger: ATGTGGAACAACTACTGGCAAAAGTATTTTCAAAGC...ATGAGGTGGACAGTGTTCTCCGTGGAGGGCTAAACAGCATTGCTTTCCAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCACAATGTTGCATATGTaGGCCAAGTTCCTAGGTCAG +
Preference number: 5 (lower is better)
Translates to: FPCPSVFRGLKNPNFPPSTMLHM*AKFLGQ
Trigger: CTGACCTAGGAACTTGGCCAACATATGCAACATTGT...GGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS TCA 90 bp GTTCACCTAGTCTTGCAGATGCTGAATGTGACGTTTTGGTTTTGCTaGGCTAGTTACTCTGTCTCTTCTCAGTCGAAAGTGAGCATCTAC +
Preference number: 5 (lower is better)
Translates to: VHLVLQMLNVTFWFC*ASYSVSSQSKVSIY
Trigger: GTAGATGCTCACTTTCGACTGAGAAGAGACAGAGTAACTAGCTCAGCAAAACCAAAACGTCACATTCAGCATCTGCAAGACTAGGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642309.1
CDS TCA 90 bp ATGAGGATCCAAAGTTGGAACAAAAATCTCCTGAATTCTACAAAATaGAAAGCCTCTCCTGGAAGAGACCTGCAGTGGGAGAAGGCGCAA +
Preference number: 5 (lower is better)
Translates to: MRIQSWNKNLLNSTK*KASPGRDLQWEKAQ
Trigger: TTGCGCCTTCTCCCACTGCAGGTCTCTTCCAGGAGAGGCTTTTCATTTTGTAGAATTCAGGAGATTTTTGTTCCAACTTTGGATCCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646351.1
CDS CCA 90 bp GTTCCAAGTGCCATCTGGCAACTTCTCAAAGAACTTTCTTGCTTTTaGTGCTTGGTCAAGAATATGAGCAGGTGGAATACCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: VPSAIWQLLKELSCF*CLVKNMSRWNTQNF
Trigger: GAAGTTCTGGGTATTCCACCTGCTCATATTCTTGACCAAGCACCAAAAGCAAGAAAGTTCTTTGAGAAGTTGCCAGATGGCACTTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644367.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646224.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS-3UTR CAA 90 bp CACACAAGAAACAAACTCAAGTTTCAATGTAGTCACGAGCTAGCTACAGGACTCCGAACAGATGAAGGTTaGCATGCTGAAGTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: HTRNKLKFQCSHELATGLRTDEG*HAEVSP
Trigger: AGGAGAGACTTCAGCATGCAAACCTTCATCTGTTCG...GAGTCCTGTAGCTAGCTCGTGACTACATTGAAACTTGAGTTTGTTTCTTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTCGAACAGATGAAGGTTaGCATGCTGAAGTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTRTDEG*HAEVSP
Trigger: AGGAGAGACTTCAGCATGCAAACCTTCATCTGTTCG...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAATGTCCAAAGGAACCTTaGCCTATCAAGGAGTCAATT +
Preference number: 5 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAECPKEP*PIKESI
Trigger: AATTGACTCCTTGATAGGCAAAGGTTCCTTTGGACA...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTAATGGCAACCCATTCTaGCTCCACACGATCATATGC +
Preference number: 5 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFNGNPF*LHTIIC
Trigger: GCATATGATCGTGTGGAGCAAGAATGGGTTGCCATT...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTAATGGCAACCCATTCTaGCTCCACACGATCATATGC +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTNGNPF*LHTIIC
Trigger: GCATATGATCGTGTGGAGCAAGAATGGGTTGCCATT...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCAGAGACCCCTCGGAAATaGGTGTTTCTCAGCAAGTCA +
Preference number: 5 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSETPRK*VFLSKS
Trigger: TGACTTGCTGAGAAACACCAATTTCCGAGGGGTCTC...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAATTGATTGCACTGCGTTaGGGGTTACAAAGAAGGATA +
Preference number: 5 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAELIALR*GLQRRI
Trigger: TATCCTTCTTTGTAACCCCAAACGCAGTGCAATCAA...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTCCAAAGTCAACTATCTaGATTGCACTGCGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTPKSTI*IALRLG
Trigger: CCCCAAACGCAGTGCAATCAAGATAGTTGACTTTGG...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTCCAAAGTCAACTATCTaGATTGCACTGCGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFPKSTI*IALRLG
Trigger: CCCCAAACGCAGTGCAATCAAGATAGTTGACTTTGG...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACTCTTGCTTTTGGTGCTaGGTCAAGAATATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: EDTSELSMKMGLDMALLNSCFWC*VKNMSR
Trigger: CCTGCTCATATTCTTGACCAAGCACCAAAAGCAAGA...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGACGGGTTCCTGGTGGTTaGTACTCCCGTTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRRVPGG*YSRFPS
Trigger: AGATGGAAAACGGGAGTACAAACCACCAGGAACCCG...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAGTTACCCAAGGCTTGTaGTCCATGGTGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKVTQGL*SMVVVM
Trigger: CATCACCACCACCATGGACAACAAGCCTTGGGTAAC...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGGTAGGCCTGATTGCCTaGGTTACCAGTAGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: KACPKVIASEMVGSSNFEVGLIA*VTSRGG
Trigger: TCCTCCTCTACTGGTAACCAAGGCAATCAGGCCTAC...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACATGTATTAGCAGAAAATaGGTATGTTGGATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTCISRK*VCWMSS
Trigger: GCTGGACATCCAACATACCAATTTTCTGCTAATACA...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTGTATTAGCAGAAAATaGGTATGTTGGATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAACISRK*VCWMSS
Trigger: GCTGGACATCCAACATACCAATTTTCTGCTAATACA...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATATGTATTAGCAGAAAATaGGTATGTTGGATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: HSACLLCLTNFTTTVPFICISRK*VCWMSS
Trigger: GCTGGACATCCAACATACCAATTTTCTGCTAATACA...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTTTCTCTATCAGCCCCTaGCCTCATTGTCAGATGTCC +
Preference number: 5 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSFSISP*PHCQMS
Trigger: GGACATCTGACAATGAGGCAAGGGGCTGATAGAGAA...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACTGGTCTAGTTACACCTaGTGTCAAAGTGCAGAACTG +
Preference number: 5 (lower is better)
Translates to: EDTSELSMKMGLDMALLNWSSYT*CQSAEL
Trigger: CAGTTCTGCACTTTGACACAAGGTGTAACTAGACCA...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACTGGTCTAGTTACACCTaGTGTCAAAGTGCAGAACTG +
Preference number: 5 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHWSSYT*CQSAEL
Trigger: CAGTTCTGCACTTTGACACAAGGTGTAACTAGACCA...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAGGTGCAATCAAGGTCTaGCTTTCAAGTTTACAAGTA +
Preference number: 5 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTGAIKV*LSSLQV
Trigger: TACTTGTAAACTTGAAAGCAAGACCTTGATTGCACC...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATAGGTGCAATCAAGGTCTaGCTTTCAAGTTTACAAGTA +
Preference number: 5 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIGAIKV*LSSLQV
Trigger: TACTTGTAAACTTGAAAGCAAGACCTTGATTGCACC...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCAGAGTTCTGCTTTGCTaGCACTCATACTCTGGACCT +
Preference number: 5 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFRVLLC*HSYSGP
Trigger: AGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTCT...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTAGAGTTCTGCTTTGCTaGCACTCATACTCTGGACCT +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPRVLLC*HSYSGP
Trigger: AGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTCT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACCCTCCCACCCAAACTGCTTTAGTTTTTaGGTGCTTGCTAAGATGTGG +
Preference number: 5 (lower is better)
Translates to: CPSVFRGLKNPNFPPSHPNCFSF*VLAKMW
Trigger: CCACATCTTAGCAAGCACCAAAAAACTAAAGCAGTT...TGGGTGGGAGGGTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGATTTCTTTCCTGGATTaGCGGGCAATGGAAGTGGGA +
Preference number: 5 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKISFLD*RAMEVG
Trigger: TCCCACTTCCATTGCCCGCAAATCCAGGAAAGAAAT...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAATACCGATTGAGCAGTTaGCGATCACTAGAGTTCATT +
Preference number: 5 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAEYRLSS*RSLEFI
Trigger: AATGAACTCTAGTGATCGCAAACTGCTCAATCGGTA...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTGCAGTCTCCCTGAGGTaGTACAGAGAAATTCTACTG +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTAVSLR*YREILL
Trigger: CAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGC...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGTGTAACAGACTTTCCTaGGAGTGGGAGCAAAGGGTG +
Preference number: 5 (lower is better)
Translates to: VIASEMVGSSNFESKSIRCNRLS*EWEQRV
Trigger: CACCCTTTGCTCCCACTCCAAGGAAAGTCTGTTACA...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTCTGTCCCAAGACCGTTaGCTGGTAAGACATTCTTCT +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTLSQDR*LVRHSS
Trigger: AGAAGAATGTCTTACCAGCAAACGGTCTTGGGACAG...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACATCCAGCTGAAGGTCTaGGTATGTGATCTCGAAAGT +
Preference number: 5 (lower is better)
Translates to: EDTSELSMKMGLDMALLNIQLKV*VCDLES
Trigger: ACTTTCGAGATCACATACCAAGACCTTCAGCTGGAT...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTAAACAGGAGGGTACCTaGCTGATGCCTAATCTGCAA +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPKQEGT*LMPNLQ
Trigger: TTGCAGATTAGGCATCAGCAAGGTACCCTCCTGTTT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGTGTAGTTTCACCATGTaGGCCAGGCAGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLCSFTM*ARQVSN
Trigger: GTTTGAGACCTGCCTGGCCAACATGGTGAAACTACA...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTGCTCAAACTGTAGTTaGGGCTCAGATAATGTATCT +
Preference number: 5 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAACSNCS*GSDNVS
Trigger: AGATACATTATCTGAGCCCAAACTACAGTTTGAGCA...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTCGAACAGATGAAGGTTaGCATGCTGAAGTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSRTDEG*HAEVSP
Trigger: AGGAGAGACTTCAGCATGCAAACCTTCATCTGTTCG...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTGTTGGTCACTTATGTTaGGCTGGCGACGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAVGHLC*AGDGHC
Trigger: ACAGTGACCGTCGCCAGCCAAACATAAGTGACCAAC...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTGTCTCCCTGGCCCTGTaGGTGTCTTCGCTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAVSLAL*VSSLLF
Trigger: AAAAAGAAGCGAAGACACCAACAGGGCCAGGGAGAC...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTAATGGCAACCCATTCTaGCTCCACACGATCATATGC +
Preference number: 5 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSNGNPF*LHTIIC
Trigger: GCATATGATCGTGTGGAGCAAGAATGGGTTGCCATT...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAGAGACCCCTCGGAAATaGGTGTTTCTCAGCAAGTCA +
Preference number: 5 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKETPRK*VFLSKS
Trigger: TGACTTGCTGAGAAACACCAATTTCCGAGGGGTCTC...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGAGAACTTTCTTGCTTTaGGTGCTTGGTCAAGAATAT +
Preference number: 5 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALRTFLL*VLGQEY
Trigger: ATATTCTTGACCAAGCACCAAAAGCAAGAAAGTTCT...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTTTGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTAGAACTTTCTTGCTTTaGGTGCTTGGTCAAGAATAT +
Preference number: 5 (lower is better)
Translates to: LCPLVAVQCVNLLLIQAARTFLL*VLGQEY
Trigger: ATATTCTTGACCAAGCACCAAAAGCAAGAAAGTTCT...AGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACCAGAGCATAATAAGGTaGAATTCGAGTTTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: EDTSELSMKMGLDMALLNQSIIR*NSSFGV
Trigger: GACCCCAAAACTCGAATTCAACCTTATTATGCTCTG...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGATGAAAGGTTGTTTCTaGAACAGGATGAGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALMKGCF*NRMSFN
Trigger: GTTGAAACTCATCCTGTTCAAGAAACAACCTTTCAT...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTAACCTCCATAGAATCTaGGGTAGAGGAGCTATTCGT +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPNLHRI*GRGAIR
Trigger: ACGAATAGCTCCTCTACCCAAGATTCTATGGAGGTT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTAACCTCCATAGAATCTaGGGTAGAGGAGCTATTCGT +
Preference number: 5 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFNLHRI*GRGAIR
Trigger: ACGAATAGCTCCTCTACCCAAGATTCTATGGAGGTT...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTCAGAAAATTGGTATGTaGGATGTCCAGCTATGCCAG +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPQKIGM*DVQLCQ
Trigger: CTGGCATAGCTGGACATCCAACATACCAATTTTCTG...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTCAGAAAATTGGTATGTaGGATGTCCAGCTATGCCAG +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTQKIGM*DVQLCQ
Trigger: CTGGCATAGCTGGACATCCAACATACCAATTTTCTG...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAATTCTCTATCAGCCCCTaGCCTCATTGTCAGATGTCC +
Preference number: 5 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKFSISP*PHCQMS
Trigger: GGACATCTGACAATGAGGCAAGGGGCTGATAGAGAA...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTGCATTTCCGTGCCCAAGTGTGTTTAGAGGACTTAAAAACCCAAATTTCCCACTCCATGAAGATGGGTTaGGACATGGCTCTTTTAAAC +
Preference number: 5 (lower is better)
Translates to: LHFRAQVCLEDLKTQISHSMKMG*DMALLN
Trigger: GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGA...GTGGGAAATTTGGGTTTTTAAGTCCTCTAAACACACTTGGGCACGGAAATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATGCTTCTCAGTGCACCTaGGTTAGGAGACCAGTCACG +
Preference number: 5 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNASQCT*VRRPVT
Trigger: CGTGACTGGTCTCCTAACCAAGGTGCACTGAGAAGC...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TGCCCTCTTGTAGCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGAGAACTGCTACATTATaGGTTACAGACATCTATGTG +
Preference number: 5 (lower is better)
Translates to: CPLVAVQCVNLLLIQAALRTATL*VTDIYV
Trigger: CACATAGATGTCTGTAACCAATAATGTAGCAGTTCT...CAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGCTACAAGAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGAGGTGCAATCAAGGTCTaGCTTTCAAGTTTACAAGTA +
Preference number: 5 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRGAIKV*LSSLQV
Trigger: TACTTGTAAACTTGAAAGCAAGACCTTGATTGCACC...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGCATACTCTGGACCTGTaGGTGCAATCAAGGTCTTGC +
Preference number: 5 (lower is better)
Translates to: KACPKVIASEMVGSSNFEHTLDL*VQSRSC
Trigger: GCAAGACCTTGATTGCACCAACAGGTCCAGAGTATG...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGACATACTCTGGACCTGTaGGTGCAATCAAGGTCTTGC +
Preference number: 5 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRHTLDL*VQSRSC
Trigger: GCAAGACCTTGATTGCACCAACAGGTCCAGAGTATG...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGAGAGTTCTGCTTTGCTaGCACTCATACTCTGGACCT +
Preference number: 5 (lower is better)
Translates to: VIASEMVGSSNFESKSIRRVLLC*HSYSGP
Trigger: AGGTCCAGAGTATGAGTGCAAGCAAAGCAGAACTCT...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CCAGGCAGTCTCCCTGAGGTTGTACAGAGAAATTCTACTGAAAACCCATCCTTAAACTGCTTTAGTTTTTaGGTGCTTGCTAAGATGTGG +
Preference number: 5 (lower is better)
Translates to: PGSLPEVVQRNSTENPSLNCFSF*VLAKMW
Trigger: CCACATCTTAGCAAGCACCAAAAAACTAAAGCAGTT...TAAGGATGGGTTTTCAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGCCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACACTTAGATCAGCAGAACAAGGCTaGTCTGTGATGTACATAAAA +
Preference number: 5 (lower is better)
Translates to: HSFWIQCPFTFRSLNTLRSAEQG*SVMYIK
Trigger: TTTTATGTACATCACAGACAAGCCTTGTTCTGCTGA...TCTAAGTGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTCATTTCAAGATGTTCTaGGGGCTGGGTGAAGTAGCT +
Preference number: 5 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSHFKMF*GLGEVA
Trigger: AGCTACTTCACCCAGCCCCAAGAACATCTTGAAATG...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGGCAGTCTCCCTGAGGTaGTACAGAGAAATTCTACTG +
Preference number: 5 (lower is better)
Translates to: VIASEMVGSSNFESKSIRAVSLR*YREILL
Trigger: CAGTAGAATTTCTCTGTACAACCTCAGGGAGACTGC...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCATCCAGCTGAAGGTCTaGGTATGTGATCTCGAAAGT +
Preference number: 5 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFIQLKV*VCDLES
Trigger: ACTTTCGAGATCACATACCAAGACCTTCAGCTGGAT...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTCAGCAGGAAAGCAGGTaGATGCTTCAGGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: EVILVSQLNETIVGEKPVQQESR*MLQGDK
Trigger: TTTGTCTCCCTGAAGCATCAACCTGCTTTCCTGCTG...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATATTCCACATAAGACTATaGATAGAGGCCAATTCTTCA +
Preference number: 5 (lower is better)
Translates to: HSACLLCLTNFTTTVPFIFHIRL*IEANSS
Trigger: TGAAGAATTGGCCTCTATCAATAGTCTTATGTGGAA...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TGGTTCCATAGCTTCTGGATCCAGTGTCCCTTTACCTTCAGAAGCCTGAACACAGCTTTGAAAATACTTTaGCCAGTAGTTGTTCCACAT +
Preference number: 5 (lower is better)
Translates to: WFHSFWIQCPFTFRSLNTALKIL*PVVVPH
Trigger: ATGTGGAACAACTACTGGCAAAAGTATTTTCAAAGC...TGTGTTCAGGCTTCTGAAGGTAAAGGGACACTGGATCCAGAAGCTATGGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTCACCTAAGACTTGCCTaGGCTTCTCCTTTACCTTCC +
Preference number: 5 (lower is better)
Translates to: EVILVSQLNETIVGEKPVHLRLA*ASPLPS
Trigger: GGAAGGTAAAGGAGAAGCCAAGGCAAGTCTTAGGTG...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CACTCAGCATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATAAACACTGTTTTTATCTaGTGGTTTAGGCTGAATTCC +
Preference number: 5 (lower is better)
Translates to: HSACLLCLTNFTTTVPFINTVFI*WFRLNS
Trigger: GGAATTCAGCCTAAACCACAAGATAAAAACAGTGTT...TATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCATGCTGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAAGTCCACAAGCCCTCTaGCTCTCCAAGTGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: RTRLVCDVHKNALSHAISSPQAL*LSKWFL
Trigger: GAGAAACCACTTGGAGAGCAAGAGGGCTTGTGGACT...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS-3UTR CAA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATGTCTCCCTGGCCCTGTaGGTGTCTTCGCTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNVSLAL*VSSLLF
Trigger: AAAAAGAAGCGAAGACACCAACAGGGCCAGGGAGAC...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTGTCCAAAGGAACCTTaGCCTATCAAGGAGTCAATT +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPCPKEP*PIKESI
Trigger: AATTGACTCCTTGATAGGCAAAGGTTCCTTTGGACA...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGTGTCCAAAGGAACCTTaGCCTATCAAGGAGTCAATT +
Preference number: 5 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKCPKEP*PIKESI
Trigger: AATTGACTCCTTGATAGGCAAAGGTTCCTTTGGACA...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTTGATTGCACTGCGTTaGGGGTTACAAAGAAGGATA +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTLIALR*GLQRRI
Trigger: TATCCTTCTTTGTAACCCCAAACGCAGTGCAATCAA...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCTTGATTGCACTGCGTTaGGGGTTACAAAGAAGGATA +
Preference number: 5 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFLIALR*GLQRRI
Trigger: TATCCTTCTTTGTAACCCCAAACGCAGTGCAATCAA...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGCCAAAGTCAACTATCTaGATTGCACTGCGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: KACPKVIASEMVGSSNFEPKSTI*IALRLG
Trigger: CCCCAAACGCAGTGCAATCAAGATAGTTGACTTTGG...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGTCTTGCTTTTGGTGCTaGGTCAAGAATATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLSCFWC*VKNMSR
Trigger: CCTGCTCATATTCTTGACCAAGCACCAAAAGCAAGA...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGTCTTGCTTTTGGTGCTaGGTCAAGAATATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: VIASEMVGSSNFESKSIRSCFWC*VKNMSR
Trigger: CCTGCTCATATTCTTGACCAAGCACCAAAAGCAAGA...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTCAGAGCATAATAAGGTaGAATTCGAGTTTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFQSIIR*NSSFGV
Trigger: GACCCCAAAACTCGAATTCAACCTTATTATGCTCTG...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAGAAAATTGGTATGTaGGATGTCCAGCTATGCCAG +
Preference number: 5 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLQKIGM*DVQLCQ
Trigger: CTGGCATAGCTGGACATCCAACATACCAATTTTCTG...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACTGTATTAGCAGAAAATaGGTATGTTGGATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: EDTSELSMKMGLDMALLNCISRK*VCWMSS
Trigger: GCTGGACATCCAACATACCAATTTTCTGCTAATACA...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTTTCTCTATCAGCCCCTaGCCTCATTGTCAGATGTCC +
Preference number: 5 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAFSISP*PHCQMS
Trigger: GGACATCTGACAATGAGGCAAGGGGCTGATAGAGAA...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTTCCATGAAGATGGGTTaGGACATGGCTCTTTTAAAC +
Preference number: 5 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFSMKMG*DMALLN
Trigger: GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGA...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTCCATGAAGATGGGTTaGGACATGGCTCTTTTAAAC +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPSMKMG*DMALLN
Trigger: GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGA...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCCATGAAGATGGGTTaGGACATGGCTCTTTTAAAC +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTSMKMG*DMALLN
Trigger: GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGA...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp ATGCTTACTGTGCCTGACAAACTTCACCACAACCGTCCCTTTCATACAGCTGAAAGAACTGCTACATTATaGGTTACAGACATCTATGTG +
Preference number: 5 (lower is better)
Translates to: MLTVPDKLHHNRPFHTAERTATL*VTDIYV
Trigger: CACATAGATGTCTGTAACCAATAATGTAGCAGTTCT...TTCAGCTGTATGAAAGGGACGGTTGTGGTGAAGTTTGTCAGGCACAGTAAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAACATGAGAGTTCTGCTTaGCTTGCACTCATACTCTGG +
Preference number: 5 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKHESSA*LALILW
Trigger: CCAGAGTATGAGTGCAAGCAAAGCAGAACTCTCATG...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTAGTCACGCACGGCTTTaGTCCCCATTACATTTTCAA +
Preference number: 5 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSSHARL*SPLHFQ
Trigger: TTGAAAATGTAATGGGGACAAAAGCCGTGCGTGACT...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAATCTGGGACCTaGGCTATGCATAATGCCAAA +
Preference number: 5 (lower is better)
Translates to: VIASEMVGSSNFESKSIRPKSGT*AMHNAK
Trigger: TTTGGCATTATGCATAGCCAAGGTCCCAGATTTTGG...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGAAGGATTCACAGGTTTaGCTGGGGATGACAGGAAAT +
Preference number: 5 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLKDSQV*LGMTGN
Trigger: ATTTCCTGTCATCCCCAGCAAAACCTGTGAATCCTT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCATGGGCTCCACTTGTCTaGTCCACTTGTTTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: RTRLVCDVHKNALSHAISWAPLV*STCFLC
Trigger: ACAGAGGAAACAAGTGGACAAGACAAGTGGAGCCCA...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTTGTCCAAAGGAACCTTaGCCTATCAAGGAGTCAATT +
Preference number: 5 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSCPKEP*PIKESI
Trigger: AATTGACTCCTTGATAGGCAAAGGTTCCTTTGGACA...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACATTTCAGTGTCATGTTaGTTCATGAGCTCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: EDTSELSMKMGLDMALLNISVSC*FMSSRS
Trigger: ACTTCTTGAGCTCATGAACAAACATGACACTGAAAT...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAATCTTGCTTTTGGTGCTaGGTCAAGAATATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKSCFWC*VKNMSR
Trigger: CCTGCTCATATTCTTGACCAAGCACCAAAAGCAAGA...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAGAGCATAATAAGGTaGAATTCGAGTTTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLQSIIR*NSSFGV
Trigger: GACCCCAAAACTCGAATTCAACCTTATTATGCTCTG...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTCAGAGCATAATAAGGTaGAATTCGAGTTTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSQSIIR*NSSFGV
Trigger: GACCCCAAAACTCGAATTCAACCTTATTATGCTCTG...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAGGATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACATGAAAGGTTGTTTCTaGAACAGGATGAGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: EDTSELSMKMGLDMALLNMKGCF*NRMSFN
Trigger: GTTGAAACTCATCCTGTTCAAGAAACAACCTTTCAT...GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGAAACCTCCATAGAATCTaGGGTAGAGGAGCTATTCGT +
Preference number: 5 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRNLHRI*GRGAIR
Trigger: ACGAATAGCTCCTCTACCCAAGATTCTATGGAGGTT...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGTCCATGAAGATGGGTTaGGACATGGCTCTTTTAAAC +
Preference number: 5 (lower is better)
Translates to: VIASEMVGSSNFESKSIRSMKMG*DMALLN
Trigger: GTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGA...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GAAGTGATTCTAGTTTCACAATTAAACGAGACGATTGTCGGAGAGAAACCTGTTCATGTAATTGCTGCTTaGCTCCTCAGTAGGTTCAGA +
Preference number: 5 (lower is better)
Translates to: EVILVSQLNETIVGEKPVHVIAA*LLSRFR
Trigger: TCTGAACCTACTGAGGAGCAAAGCAGCAATTACATG...AACAGGTTTCTCTCCGACAATCGTCTCGTTTAATTGTGAAACTAGAATCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTACACGCAAAGTGACCTaGCAATACCTTACAATTAGT +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPTRKVT*QYLTIS
Trigger: ACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTTGGTCTAGTTACACCTaGTGTCAAAGTGCAGAACTG +
Preference number: 5 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSWSSYT*CQSAEL
Trigger: CAGTTCTGCACTTTGACACAAGGTGTAACTAGACCA...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGATGGTCTAGTTACACCTaGTGTCAAAGTGCAGAACTG +
Preference number: 5 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRWSSYT*CQSAEL
Trigger: CAGTTCTGCACTTTGACACAAGGTGTAACTAGACCA...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGCCAAAGGTTATCCCAAAGAACTGCTTTAGTTTTTaGGTGCTTGCTAAGATGTGG +
Preference number: 5 (lower is better)
Translates to: VGSSNFESKSIRPKVIPKNCFSF*VLAKMW
Trigger: CCACATCTTAGCAAGCACCAAAAAACTAAAGCAGTT...CTTTGGGATAACCTTTGGCCTTATGGATTTGGACTCGAAATTAGAAGAGCCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp AAAGCATGTCCAAAAGTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTGCCTCCTCTATGCTTaGAAGAAGGATTCACAGGTT +
Preference number: 5 (lower is better)
Translates to: KACPKVIASEMVGSSNFECLLYA*KKDSQV
Trigger: AACCTGTGAATCCTTCTTCAAAGCATAGAGGAGGCA...CTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCACTTTTGGACATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTACTTTTGCCACCACTTaGCCTGACCCAAACTTAATG +
Preference number: 5 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSTFATT*PDPNLM
Trigger: CATTAAGTTTGGGTCAGGCAAAGTGGTGGCAAAAGT...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATCTGCATCATGAACTTTaGCCACCACTTTGCCTGACC +
Preference number: 5 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNLHHEL*PPLCLT
Trigger: GGTCAGGCAAAGTGGTGGCAAAAGTTCATGATGCAG...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTACTGTCGCTGGTCAGTaGTGTCATCTTCTGCAAGTT +
Preference number: 5 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTATVAGQ*CHLLQV
Trigger: AACTTGCAGAAGATGACACAACTGACCAGCGACAGT...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCCATGTCATTGCACTTaGCTGCCTAATTCAGTAACA +
Preference number: 5 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLPCHCT*LPNSVT
Trigger: TGTTACTGAATTAGGCAGCAAAGTGCAATGACATGG...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATCACCTAAGACTTGCCTaGGCTTCTCCTTTACCTTCC +
Preference number: 5 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNHLRLA*ASPLPS
Trigger: GGAAGGTAAAGGAGAAGCCAAGGCAAGTCTTAGGTG...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTTGTCCAAAGGAACCTTaGCCTATCAAGGAGTCAATT +
Preference number: 5 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSCPKEP*PIKESI
Trigger: AATTGACTCCTTGATAGGCAAAGGTTCCTTTGGACA...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATAATGGCAACCCATTCTaGCTCCACACGATCATATGC +
Preference number: 5 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNNGNPF*LHTIIC
Trigger: GCATATGATCGTGTGGAGCAAGAATGGGTTGCCATT...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTATTTCAGTGTCATGTTaGTTCATGAGCTCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPISVSC*FMSSRS
Trigger: ACTTCTTGAGCTCATGAACAAACATGACACTGAAAT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTATTTCAGTGTCATGTTaGTTCATGAGCTCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTISVSC*FMSSRS
Trigger: ACTTCTTGAGCTCATGAACAAACATGACACTGAAAT...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTATTTCAGTGTCATGTTaGTTCATGAGCTCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFISVSC*FMSSRS
Trigger: ACTTCTTGAGCTCATGAACAAACATGACACTGAAAT...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATCCAAAGTCAACTATCTaGATTGCACTGCGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNPKSTI*IALRLG
Trigger: CCCCAAACGCAGTGCAATCAAGATAGTTGACTTTGG...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTTCTTGCTTTTGGTGCTaGGTCAAGAATATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTASCFWC*VKNMSR
Trigger: CCTGCTCATATTCTTGACCAAGCACCAAAAGCAAGA...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GATACCTCTGAGCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTAGAACTTTCTTGCTTTaGGTGCTTGGTCAAGAATAT +
Preference number: 5 (lower is better)
Translates to: DTSELSMKMGLDMALLNTRTFLL*VLGQEY
Trigger: ATATTCTTGACCAAGCACCAAAAGCAAGAAAGTTCT...AGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGCTCAGAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTAGAACTTTCTTGCTTTaGGTGCTTGGTCAAGAATAT +
Preference number: 5 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFRTFLL*VLGQEY
Trigger: ATATTCTTGACCAAGCACCAAAAGCAAGAAAGTTCT...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CACACAAGAAACAAACTCAAGTTTCAATGTAGTCACGAGCTAGCTACAGGACTCATGAAAGGTTGTTTCTaGAACAGGATGAGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: HTRNKLKFQCSHELATGLMKGCF*NRMSFN
Trigger: GTTGAAACTCATCCTGTTCAAGAAACAACCTTTCAT...GAGTCCTGTAGCTAGCTCGTGACTACATTGAAACTTGAGTTTGTTTCTTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS-3UTR CAA 90 bp GCGGTTCAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTATGAAAGGTTGTTTCTaGAACAGGATGAGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: AVQCVNLLLIQAALHFVFMKGCF*NRMSFN
Trigger: GTTGAAACTCATCCTGTTCAAGAAACAACCTTTCAT...AAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTGAACCGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CTGCTGAGTCATCTTAAACAGGTTATCGGCAGAGGTAGATTACTGCTTCTTTTCATGAAAGGTTGTTTCTaGAACAGGATGAGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: LLSHLKQVIGRGRLLLLFMKGCF*NRMSFN
Trigger: GTTGAAACTCATCCTGTTCAAGAAACAACCTTTCAT...GAAAAGAAGCAGTAATCTACCTCTGCCGATAACCTGTTTAAGATGACTCAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTATGAAAGGTTGTTTCTaGAACAGGATGAGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPMKGCF*NRMSFN
Trigger: GTTGAAACTCATCCTGTTCAAGAAACAACCTTTCAT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GCTATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTAGAACTGCTACATTATaGGTTACAGACATCTATGTG +
Preference number: 5 (lower is better)
Translates to: AIHEDGFGHGSFKHFNVPRTATL*VTDIYV
Trigger: CACATAGATGTCTGTAACCAATAATGTAGCAGTTCT...AGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGAACTGCTTTAGTTTTTaGGTGCTTGCTAAGATGTGG +
Preference number: 5 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLNCFSF*VLAKMW
Trigger: CCACATCTTAGCAAGCACCAAAAAACTAAAGCAGTT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTAAGGATTCACAGGTTTaGCTGGGGATGACAGGAAAT +
Preference number: 5 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAKDSQV*LGMTGN
Trigger: ATTTCCTGTCATCCCCAGCAAAACCTGTGAATCCTT...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGATACCGATTGAGCAGTTaGCGATCACTAGAGTTCATT +
Preference number: 5 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRYRLSS*RSLEFI
Trigger: AATGAACTCTAGTGATCGCAAACTGCTCAATCGGTA...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CAACTTTATGACACACGCAAAGTGACCTTGCAATACCTTACAATTAGTGGGTCAAGGAAATTTACCGTTTaGCTTCTTGCATCTAGTCAC +
Preference number: 5 (lower is better)
Translates to: QLYDTRKVTLQYLTISGSRKFTV*LLASSH
Trigger: GTGACTAGATGCAAGAAGCAAAACGGTAAATTTCCT...TGACCCACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGTGTCATAAAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGCAATCTATTTCAGTGTCATGTTaGTTCATGAGCTCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: EDGFGHGSFKHFNVPLQSISVSC*FMSSRS
Trigger: ACTTCTTGAGCTCATGAACAAACATGACACTGAAAT...AGATTGCAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTCAGAGCATAATAAGGTaGAATTCGAGTTTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTAQSIIR*NSSFGV
Trigger: GACCCCAAAACTCGAATTCAACCTTATTATGCTCTG...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAACACGCAAAGTGACCTaGCAATACCTTACAATTAGT +
Preference number: 5 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKTRKVT*QYLTIS
Trigger: ACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGT...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAGGTGCAATCAAGGTCTaGCTTTCAAGTTTACAAGTA +
Preference number: 5 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKGAIKV*LSSLQV
Trigger: TACTTGTAAACTTGAAAGCAAGACCTTGATTGCACC...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATAGTCACGCACGGCTTTaGTCCCCATTACATTTTCAA +
Preference number: 5 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNSHARL*SPLHFQ
Trigger: TTGAAAATGTAATGGGGACAAAAGCCGTGCGTGACT...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAGCCTTTCCCGGAGGCTaGTTTATAACATTTTGTAAT +
Preference number: 5 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKAFPGG*FITFCN
Trigger: ATTACAAAATGTTATAAACAAGCCTCCGGGAAAGGC...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGAGCCTTTCCCGGAGGCTaGTTTATAACATTTTGTAAT +
Preference number: 5 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRAFPGG*FITFCN
Trigger: ATTACAAAATGTTATAAACAAGCCTCCGGGAAAGGC...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAATGCTCAAACTGTAGTTaGGGCTCAGATAATGTATCT +
Preference number: 5 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKCSNCS*GSDNVS
Trigger: AGATACATTATCTGAGCCCAAACTACAGTTTGAGCA...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp GTGATTGCATCTGAAATGGTAGGCTCTTCTAATTTCGAGTCCAAATCCATAAGGAAAGTAATCTCAGTGTaGTCAACTGATAATCAGCAG +
Preference number: 5 (lower is better)
Translates to: VIASEMVGSSNFESKSIRKVISV*STDNQQ
Trigger: CTGCTGATTATCAGTTGACAACACTGAGATTACTTT...CCTTATGGATTTGGACTCGAAATTAGAAGAGCCTACCATTTCAGATGCAATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS-3UTR CAA 90 bp ATCCATGAAGATGGGTTTGGACATGGCTCTTTTAAACACTTCAATGTCCCTTTGAGTACTTCCTACTTATaGCTTCCACTGATAACTCAT +
Preference number: 5 (lower is better)
Translates to: IHEDGFGHGSFKHFNVPLSTSYL*LPLITH
Trigger: ATGAGTTATCAGTGGAAGCAATAAGTAGGAAGTACT...CAAAGGGACATTGAAGTGTTTAAAAGAGCCATGTCCAAACCCATCTTCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS CCA 90 bp AACACACACACACTATTCTCATTTGTTTCTACATGGTATGCTACATaGAAGGCACATTCCCCAAGATTTAGACTATTACTACCAGATCAA +
Preference number: 5 (lower is better)
Translates to: NTHTLFSFVSTWYAT*KAHSPRFRLLLPDQ
Trigger: TTGATCTGGTAGTAATAGTCTAAATCTTGGGGAATGTGCCTTCCATGTAGCATACCATGTAGAAACAAATGAGAATAGTGTGTGTGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643355.1
CDS-3UTR CAA 90 bp TGTACTACAAATTACTTGGTGATGTATGTTTTCACGCAAGGAAACAGGCCTAGAAGAACTTTCTTGCTTTaGGTGCTTGGTCAAGAATAT +
Preference number: 5 (lower is better)
Translates to: CTTNYLVMYVFTQGNRPRRTFLL*VLGQEY
Trigger: ATATTCTTGACCAAGCACCAAAAGCAAGAAAGTTCT...TCTAGGCCTGTTTCCTTGCGTGAAAACATACATCACCAAGTAATTTGTAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp CAGTGTGTTAATCTCCTCCTGATTCAAGCAGCTTTGCACTTTGTTTTTGGAAAAAGAACTTTCTTGCTTTaGGTGCTTGGTCAAGAATAT +
Preference number: 5 (lower is better)
Translates to: QCVNLLLIQAALHFVFGKRTFLL*VLGQEY
Trigger: ATATTCTTGACCAAGCACCAAAAGCAAGAAAGTTCT...TTTTCCAAAAACAAAGTGCAAAGCTGCTTGAATCAGGAGGAGATTAACACACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp GTGCAGAACTGCTACATTATTGGTTACAGACATCTATGTGCTATAAAAACAGCTACACGCAAAGTGACCTaGCAATACCTTACAATTAGT +
Preference number: 5 (lower is better)
Translates to: VQNCYIIGYRHLCAIKTATRKVT*QYLTIS
Trigger: ACTAATTGTAAGGTATTGCAAGGTCACTTTGCGTGT...AGCTGTTTTTATAGCACATAGATGTCTGTAACCAATAATGTAGCAGTTCTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp AGTTACACCTTGTGTCAAAGTGCAGAACTGCTACATTATTGGTTACAGACATCTAGAACTGCTACATTATaGGTTACAGACATCTATGTG +
Preference number: 5 (lower is better)
Translates to: SYTLCQSAELLHYWLQTSRTATL*VTDIYV
Trigger: CACATAGATGTCTGTAACCAATAATGTAGCAGTTCT...AGATGTCTGTAACCAATAATGTAGCAGTTCTGCACTTTGACACAAGGTGTAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338785.8
ENST00000646548.1
ENST00000647188.2
ENST00000647504.1
CDS-3UTR CAA 90 bp TACACATTTAACTCAACTTTGATACTATACCTACCAGACCTGGACCAGTTTAATAATGTGACATGCTTTTaGTCCTCATCCCTAAGACCT +
Preference number: 5 (lower is better)
Translates to: YTFNSTLILYLPDLDQFNNVTCF*SSSLRP
Trigger: AGGTCTTAGGGATGAGGACAAAAAGCATGTCACATT...ATTAAACTGGTCCAGGTCTGGTAGGTATAGTATCAAAGTTGAGTTAAATGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS TCA 90 bp TCATGTTTGTTCATGAGCTCAAGAAGTCGCACTTCTATCTGTGCTTaGTTCAGAAAAGCCTTCTTGTTCTTTATTATTTTAATGGCAACC +
Preference number: 5 (lower is better)
Translates to: SCLFMSSRSRTSICA*FRKAFLFFIILMAT
Trigger: GGTTGCCATTAAAATAATAAAGAACAAGAAGGCTTTTCTGAATCAAGCACAGATAGAAGTGCGACTTCTTGAGCTCATGAACAAACATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643355.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS GCA 90 bp AGTGTCATGTTTGTTCATGAGCTCAAGAAGTCGCACTTCTATCTGTaGTTGATTCAGAAAAGCCTTCTTGTTCTTTATTATTTTAATGGC +
Preference number: 5 (lower is better)
Translates to: SVMFVHELKKSHFYL*LIQKSLLVLYYFNG
Trigger: GCCATTAAAATAATAAAGAACAAGAAGGCTTTTCTGAATCAAGCACAGATAGAAGTGCGACTTCTTGAGCTCATGAACAAACATGACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643355.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS-3UTR CAA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAATTTCAGTGTCATGTTaGTTCATGAGCTCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: RTRLVCDVHKNALSHAISISVSC*FMSSRS
Trigger: ACTTCTTGAGCTCATGAACAAACATGACACTGAAAT...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCAATGAAAGGTTGTTTCTaGAACAGGATGAGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: RTRLVCDVHKNALSHAISMKGCF*NRMSFN
Trigger: GTTGAAACTCATCCTGTTCAAGAAACAACCTTTCAT...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS-3UTR CAA 90 bp AGAACAAGGCTTGTCTGTGATGTACATAAAAACGCTCTTTCTCATGCTATTTCATTCCACATAAGACTATaGATAGAGGCCAATTCTTCA +
Preference number: 5 (lower is better)
Translates to: RTRLVCDVHKNALSHAISFHIRL*IEANSS
Trigger: TGAAGAATTGGCCTCTATCAATAGTCTTATGTGGAA...TGAAATAGCATGAGAAAGAGCGTTTTTATGTACATCACAGACAAGCCTTGTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646548.1
ENST00000647188.2
CDS TCA 90 bp ACCTTTAAAGAATTATGGTCATCCAAATACTTGCATATCCATTGCTaGGCTCTATTTGCAAATATTAAAAGTACACTCTTGAGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: TFKELWSSKYLHIHC*ALFANIKSTLLRKG
Trigger: GCCCTTCCTCAAGAGTGTACTTTTAATATTTGCAAATAGAGCTCAGCAATGGATATGCAAGTATTTGGATGACCATAATTCTTTAAAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462274.2
CDS GCA 72 bp CCGCCGCGCCCCAGACATCGCAGGAATTCCGGACGCTaGGCCGGGCCCGGCGGCCCTGAGGCTGGCACCTGG +
Preference number: 6 (lower is better)
Translates to: PPRPRHRRNSGR*AGPGGPEAGTW
Trigger: CCAGGTGCCAGCCTCAGGGCCGCCGGGCCCGGCGCAGCGTCCGGAATTCCTGCGATGTCTGGGGCGCGGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647425.1
CDS CCA 72 bp TCCCCGGGAAGCGCGGCGGCCGCGACCGTCCGCGCGTaGAGCCGGTTCTTCGAAGGGCTGGCGGGCCTCCTA +
Preference number: 6 (lower is better)
Translates to: SPGSAAAATVRA*SRFFEGLAGLL
Trigger: TAGGAGGCCCGCCAGCCCTTCGAAGAACCGGCTCCACGCGCGGACGGTCGCGGCCGCCGCGCTTCCCGGGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647425.1
CDS GCA 72 bp GGGCGGCGTCGGCGAGGCCGGGCGCCGAGCGGCGGCTaGTGCCGGCGGCTTCTTCCCGAGGAGGATTTTGTA +
Preference number: 6 (lower is better)
Translates to: GRRRRGRAPSGG*CRRLLPEEDFV
Trigger: TACAAAATCCTCCTCGGGAAGAAGCCGCCGGCAGCAGCCGCCGCTCGGCGCCCGGCCTCGCCGACGCCGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000644942.1
ENST00000647188.2
ENST00000647504.1
CDS GCA 72 bp TGCACGGCAGCTGTGAAGTGCCCACCACTGTGCCGATaGTGGTGCGTCGGATCCGACCGGGCTCTCCCACTG +
Preference number: 6 (lower is better)
Translates to: CTAAVKCPPLCR*WCVGSDRALPL
Trigger: CAGTGGGAGAGCCCGGTCGGATCCGACGCACCAGCATCGGCACAGTGGTGGGCACTTCACAGCTGCCGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS GCA 72 bp ATGGCCTGCACGGCAGCTGTGAAGTGCCCACCACTGTaGCGATGCTGGTGCGTCGGATCCGACCGGGCTCTC +
Preference number: 6 (lower is better)
Translates to: MACTAAVKCPPL*RCWCVGSDRAL
Trigger: GAGAGCCCGGTCGGATCCGACGCACCAGCATCGGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGGCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS GCA 72 bp CGCACCTGGGGACTGTGTGTCTCGCAGTCCATGGCCTaGACGGCAGCTGTGAAGTGCCCACCACTGTGCCGA +
Preference number: 6 (lower is better)
Translates to: RTWGLCVSQSMA*TAAVKCPPLCR
Trigger: TCGGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGGCCATGGACTGCGAGACACACAGTCCCCAGGTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS CCA 72 bp ACGGCAGCTGTGAAGTGCCCACCACTGTGCCGATGCTaGTGCGTCGGATCCGACCGGGCTCTCCCACTGTTG +
Preference number: 6 (lower is better)
Translates to: TAAVKCPPLCRC*CVGSDRALPLL
Trigger: CAACAGTGGGAGAGCCCGGTCGGATCCGACGCACCAGCATCGGCACAGTGGTGGGCACTTCACAGCTGCCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS TCA 72 bp TGTGTGTCTCGCAGTCCATGGCCTGCACGGCAGCTGTaGAGTGCCCACCACTGTGCCGATGCTGGTGCGTCG +
Preference number: 6 (lower is better)
Translates to: CVSRSPWPARQL*SAHHCADAGAS
Trigger: CGACGCACCAGCATCGGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGGCCATGGACTGCGAGACACACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS GCA 72 bp GCTGGTGCGTCGGATCCGACCGGGCTCTCCCACTGTTaGTTGTCCCCGATGAGCCACCTGAGCTTGACGATG +
Preference number: 6 (lower is better)
Translates to: AGASDPTGLSHC*LSPMSHLSLTM
Trigger: CATCGTCAAGCTCAGGTGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCCGGTCGGATCCGACGCACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS GCA 72 bp GCAGCTGTGAAGTGCCCACCACTGTGCCGATGCTGGTaGGTCGGATCCGACCGGGCTCTCCCACTGTTGCTT +
Preference number: 6 (lower is better)
Translates to: AAVKCPPLCRCW*VGSDRALPLLL
Trigger: AAGCAACAGTGGGAGAGCCCGGTCGGATCCGACGCACCAGCATCGGCACAGTGGTGGGCACTTCACAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS GCA 72 bp CTCACCTGGGGACTGTGTGTCTCGCAGTCCATGGCCTaGACGGCAGCTGTGAAGTGCCCACCACTGTGCCGA +
Preference number: 6 (lower is better)
Translates to: LTWGLCVSQSMA*TAAVKCPPLCR
Trigger: TCGGCACAGTGGTGGGCACTTCACAGCTGCCGTGCAGGCCATGGACTGCGAGACACACAGTCCCCAGGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS CCA 72 bp CCGATGAGCCACCTGAGCTTGACGATGTACTGGAGGTaGTGCCCGAAGACTGAGACTGCTCCATGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: PMSHLSLTMYWR*CPKTETAPWRG
Trigger: GCCCCGCCATGGAGCAGTCTCAGTCTTCGGGCACCACCTCCAGTACATCGTCAAGCTCAGGTGGCTCATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS CCA 72 bp GTGCTGCTCCACCTGAGCTTGACGATGTACTGGAGGTaGTGCCCGAAGACTGAGACTGCTCCATGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: VLLHLSLTMYWR*CPKTETAPWRG
Trigger: GCCCCGCCATGGAGCAGTCTCAGTCTTCGGGCACCACCTCCAGTACATCGTCAAGCTCAGGTGGAGCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645424.1
CDS CAA 72 bp GGTGCGTCGGATCCGACCGGGCTCTCCCACTGTTGCTaGTCCCCGATGAGCCACCTGAGCTTGACGATGTAC +
Preference number: 6 (lower is better)
Translates to: GASDPTGLSHCC*SPMSHLSLTMY
Trigger: GTACATCGTCAAGCTCAGGTGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCCGGTCGGATCCGACGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS CAA 72 bp TGCTGGTGCGTCGGATCCGACCGGGCTCTCCCACTGTaGCTTGTCCCCGATGAGCCACCTGAGCTTGACGAT +
Preference number: 6 (lower is better)
Translates to: CWCVGSDRALPL*LVPDEPPELDD
Trigger: ATCGTCAAGCTCAGGTGGCTCATCGGGGACAAGCAACAGTGGGAGAGCCCGGTCGGATCCGACGCACCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS CCA 72 bp TTGCTGACGCACCTGAGCTTGACGATGTACTGGAGGTaGTGCCCGAAGACTGAGACTGCTCCATGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: LLTHLSLTMYWR*CPKTETAPWRG
Trigger: GCCCCGCCATGGAGCAGTCTCAGTCTTCGGGCACCACCTCCAGTACATCGTCAAGCTCAGGTGCGTCAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398956.2
CDS CAA 90 bp GCAGCATGGAATGAAAATGACGGTGCAAGCCGAACAGATGAAGGTTaGCATGCTGAAGTCTCTCCTCCGGGACGATGGCGGGGCGCTCGC +
Preference number: 6 (lower is better)
Translates to: AAWNENDGASRTDEG*HAEVSPPGRWRGAR
Trigger: GCGAGCGCCCCGCCATCGTCCCGGAGGAGAGACTTCAGCATGCAAACCTTCATCTGTTCGGCTTGCACCGTCATTTTCATTCCATGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647504.1
CDS CCA 72 bp TTGTCCCCGATGAGCCACCTGAGCTTGACGATGTACTaGAGGTGGTGCCCGAAGACTGAGACTGCTCCATGG +
Preference number: 6 (lower is better)
Translates to: LSPMSHLSLTMY*RWCPKTETAPW
Trigger: CCATGGAGCAGTCTCAGTCTTCGGGCACCACCTCCAGTACATCGTCAAGCTCAGGTGGCTCATCGGGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS CCA 72 bp CATCCAGTGCTGCTCCACCTGAGCTTGACGATGTACTaGAGGTGGTGCCCGAAGACTGAGACTGCTCCATGG +
Preference number: 6 (lower is better)
Translates to: HPVLLHLSLTMY*RWCPKTETAPW
Trigger: CCATGGAGCAGTCTCAGTCTTCGGGCACCACCTCCAGTACATCGTCAAGCTCAGGTGGAGCAGCACTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645424.1
CDS CCA 72 bp CAGCCCAAGTCTGAACCAACTTCTGACGGCCAGGAGTaGACAGACAGAAGGATGGGGCAGTACAGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: QPKSEPTSDGQE*TDRRMGQYSRR
Trigger: CCTCCTGCTGTACTGCCCCATCCTTCTGTCTGTCCACTCCTGGCCGTCAGAAGTTGGTTCAGACTTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646351.1
CDS TCA 72 bp CTGGCATCCAGTGCTGCTCCACCTGAGAATGGCAGGTaGCACAAGCAAATGAACCACGTGCGAGCTCACCTG +
Preference number: 6 (lower is better)
Translates to: LASSAAPPENGR*HKQMNHVRAHL
Trigger: CAGGTGAGCTCGCACGTGGTTCATTTGCTTGTGTCACCTGCCATTCTCAGGTGGAGCAGCACTGGATGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS CCA 72 bp CTTCTTCCCGAGGAGGATTTTGTAAATCTCACAAAATaGCGCGCGCTCCGAACCTGCGCAGCGAGAAGCGCC +
Preference number: 6 (lower is better)
Translates to: LLPEEDFVNLTK*RALRTCAARSA
Trigger: GGCGCTTCTCGCTGCGCAGGTTCGGAGCGCGCGCCATTTTGTGAGATTTACAAAATCCTCCTCGGGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000644942.1
ENST00000647188.2
ENST00000647504.1
CDS TCA 72 bp AAGCCAGGGAACAACCCCCAGCTTTCCAAAGCCTCCTaGAAAGTGAGTGGACTCCCACTGCACCACCTGAAC +
Preference number: 6 (lower is better)
Translates to: KPGNNPQLSKAS*KVSGLPLHHLN
Trigger: GTTCAGGTGGTGCAGTGGGAGTCCACTCACTTTTCAGGAGGCTTTGGAAAGCTGGGGGTTGTTCCCTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462274.2
CDS TCA 72 bp GCGCAGCCTGCCTGCTCCATCGGAATGCCCTTTAGATaGATCCCCTTGTGCTGTTACTGTGTCCTTGTCGTC +
Preference number: 6 (lower is better)
Translates to: AQPACSIGMPFR*IPLCCYCVLVV
Trigger: GACGACAAGGACACAGTAACAGCACAAGGGGATTCATCTAAAGGGCATTCCGATGGAGCAGGCAGGCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646523.1
CDS TCA 72 bp GACCTGCAGTGGGAGAAGGCGCAAGTAAGCCACAGATaGGCGAGAAGACTCCAGCCCAAGTCTGAACCAACT +
Preference number: 6 (lower is better)
Translates to: DLQWEKAQVSHR*ARRLQPKSEPT
Trigger: AGTTGGTTCAGACTTGGGCTGGAGTCTTCTCGCTCATCTGTGGCTTACTTGCGCCTTCTCCCACTGCAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646351.1
CDS CCA 72 bp AGGAAATTGCTGACGCACCTGAGCTTGACGATGTACTaGAGGTGGTGCCCGAAGACTGAGACTGCTCCATGG +
Preference number: 6 (lower is better)
Translates to: RKLLTHLSLTMY*RWCPKTETAPW
Trigger: CCATGGAGCAGTCTCAGTCTTCGGGCACCACCTCCAGTACATCGTCAAGCTCAGGTGCGTCAGCAATTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398956.2
CDS TCA 72 bp ACTTATGTTTGGCTGGCGACGGTCACTGTACTGATGTaGATGGGGCATCTGTCCAGCCATCTGAAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: TYVWLATVTVLM*MGHLSSHLKAS
Trigger: GCTGGCCTTCAGATGGCTGGACAGATGCCCCATTCACATCAGTACAGTGACCGTCGCCAGCCAAACATAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000426672.6
ENST00000455097.6
ENST00000642309.1
ENST00000643551.1
ENST00000643624.1
ENST00000643854.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS GCA 72 bp ATGAAAATGACGGTGCAAGCCGAACAGATGAAGGTTTaGATGCTGAAGTCTCTCCTCCGGGACGATGGCGGG +
Preference number: 6 (lower is better)
Translates to: MKMTVQAEQMKV*MLKSLLRDDGG
Trigger: CCCGCCATCGTCCCGGAGGAGAGACTTCAGCATGCAAACCTTCATCTGTTCGGCTTGCACCGTCATTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647504.1
CDS CCA 72 bp TTTCTCAGGGGAGCAGTTGCTGGGTCACGGAAGGTTTaGGGCATCCGCCTCTGTAACATGACAATATCAGGC +
Preference number: 6 (lower is better)
Translates to: FLRGAVAGSRKV*GIRLCNMTISG
Trigger: GCCTGATATTGTCATGTTACAGAGGCGGATGCCCCAAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000426672.6
ENST00000462274.2
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646523.1
CDS CCA 72 bp TTTGTGGCGCCCGAGACCAGCGTTGGGAAATTAGGCTaGAGCCATCATGAAAACTTTTTCAGGCAGTGCACG +
Preference number: 6 (lower is better)
Translates to: FVAPETSVGKLG*SHHENFFRQCT
Trigger: CGTGCACTGCCTGAAAAAGTTTTCATGATGGCTCCAGCCTAATTTCCCAACGCTGGTCTCGGGCGCCACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647425.1
CDS TCA 72 bp ATTCTAAAGGCACCTGGCATCCAGTGCTGCTCCACCTaGGAATGGCAGGTGACACAAGCAAATGAACCACGT +
Preference number: 6 (lower is better)
Translates to: ILKAPGIQCCST*EWQVTQANEPR
Trigger: ACGTGGTTCATTTGCTTGTGTCACCTGCCATTCTCAGGTGGAGCAGCACTGGATGCCAGGTGCCTTTAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338785.8
CDS TCA 72 bp TTGGCCAAGTTCCTAGGTCAGCCTCATGAAAACTACTaGCTCCAAGAGATGTTCCTGGTCAAGGGCACTGGG +
Preference number: 6 (lower is better)
Translates to: LAKFLGQPHENY*LQEMFLVKGTG
Trigger: CCCAGTGCCCTTGACCAGGAACATCTCTTGGAGTCAGTAGTTTTCATGAGGCTGACCTAGGAACTTGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS TCA 72 bp AGTACGGCAGCTTCCAATCTTAGCTGCAGAGCCCTATaGCCCTGGGTATGGGGCTTCTTATACAAACCAACC +
Preference number: 6 (lower is better)
Translates to: STAASNLSCRAL*PWVWGFLYKPT
Trigger: GGTTGGTTTGTATAAGAAGCCCCATACCCAGGGTCATAGGGCTCTGCAGCTAAGATTGGAAGCTGCCGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643355.1
CDS CCA 72 bp CAACCCCCAGCTTTCCAAAGCCTCCTGAAAAGTGAGTaGACTCCCACTGCACCACCTGAACATGGTAATTCT +
Preference number: 6 (lower is better)
Translates to: QPPAFQSLLKSE*TPTAPPEHGNS
Trigger: AGAATTACCATGTTCAGGTGGTGCAGTGGGAGTCCACTCACTTTTCAGGAGGCTTTGGAAAGCTGGGGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462274.2
CDS CCA 72 bp AGCCTCATGAAAACTACTGACTCCAAGAGATGTTCCTaGTCAAGGGCACTGGGGCCGCTGCAGAAGAAATAC +
Preference number: 6 (lower is better)
Translates to: SLMKTTDSKRCS*SRALGPLQKKY
Trigger: GTATTTCTTCTGCAGCGGCCCCAGTGCCCTTGACCAGGAACATCTCTTGGAGTCAGTAGTTTTCATGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS TCA 72 bp CCACCAGGTCCTCCTGTTTCCACTCCAAGAATGTTATaGAGTTTACGGGTTCCTGGTGGTTTGTACTCCCGT +
Preference number: 6 (lower is better)
Translates to: PPGPPVSTPRML*SLRVPGGLYSR
Trigger: ACGGGAGTACAAACCACCAGGAACCCGTAAACTTCATAACATTCTTGGAGTGGAAACAGGAGGACCTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644367.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646224.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS CAA 90 bp GCAGCATGGAATGAAAATGACGGTGCAAGCCGAACAGATGAAGGTTaGCATGCTGAAGTCTCTCCTCCTCAGTCGAAAGTGAGCATCTAC +
Preference number: 6 (lower is better)
Translates to: AAWNENDGASRTDEG*HAEVSPPQSKVSIY
Trigger: GTAGATGCTCACTTTCGACTGAGGAGGAGAGACTTCAGCATGCAAACCTTCATCTGTTCGGCTTGCACCGTCATTTTCATTCCATGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643854.1
CDS TCA 72 bp CCACCAGGTCCTCCTGTTTCCACTCCAAGAATGTTATaGAGTTTACGGGTTCCTGGTGGTTTGTACTCCTGT +
Preference number: 6 (lower is better)
Translates to: PPGPPVSTPRML*SLRVPGGLYSC
Trigger: ACAGGAGTACAAACCACCAGGAACCCGTAAACTTCATAACATTCTTGGAGTGGAAACAGGAGGACCTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646351.1
CDS CCA 72 bp AGCCCAAGGCAGCAGGATAACTTGTATGTGAGTCAGTaGGGATACTGTTCACCTAGTCTTGCAGATGCTGAA +
Preference number: 6 (lower is better)
Translates to: SPRQQDNLYVSQ*GYCSPSLADAE
Trigger: TTCAGCATCTGCAAGACTAGGTGAACAGTATCCCCACTGACTCACATACAAGTTATCCTGCTGCCTTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642309.1
CDS CAA 90 bp TCTGGTCAGAATATGATAAGGCAGAAACCTGTTGGTCACTTATGTTaGGCTGGCGACGGTCACTGTACTGATGTGAATGGGGCATCTGTC +
Preference number: 6 (lower is better)
Translates to: SGQNMIRQKPVGHLC*AGDGHCTDVNGASV
Trigger: GACAGATGCCCCATTCACATCAGTACAGTGACCGTCGCCAGCCAAACATAAGTGACCAACAGGTTTCTGCCTTATCATATTCTGACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000426672.6
ENST00000642309.1
ENST00000643551.1
ENST00000643624.1
ENST00000643854.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS CAA 90 bp GCAGCATGGAATGAAAATGACGGTGCAAGCCGAACAGATGAAGGTTaGCATGCTGAAGTCTCTCCTCCTGTATGCATCGTCTTCTTTCAA +
Preference number: 6 (lower is better)
Translates to: AAWNENDGASRTDEG*HAEVSPPVCIVFFQ
Trigger: TTGAAAGAAGACGATGCATACAGGAGGAGAGACTTCAGCATGCAAACCTTCATCTGTTCGGCTTGCACCGTCATTTTCATTCCATGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000426672.6
ENST00000643551.1
ENST00000643624.1
ENST00000644942.1
ENST00000645424.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
CDS CAA 90 bp GCAGCATGGAATGAAAATGACGGTGCAAGCCGAACAGATGAAGGTTaGCATGCTGAAGTCTCTCCTCCTCAATCCAGTGGTAACATTTCT +
Preference number: 6 (lower is better)
Translates to: AAWNENDGASRTDEG*HAEVSPPQSSGNIS
Trigger: AGAAATGTTACCACTGGATTGAGGAGGAGAGACTTCAGCATGCAAACCTTCATCTGTTCGGCTTGCACCGTCATTTTCATTCCATGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455097.6
ENST00000642309.1
CDS TCA 72 bp AGGAGAAAGACCCAAAACTCTTGGTATTGGTGCGACTaGTACAAGAGACTAAGACTGCCTGCCTGCTTAGAG +
Preference number: 6 (lower is better)
Translates to: RRKTQNSWYWCD*YKRLRLPACLE
Trigger: CTCTAAGCAGGCAGGCAGTCTTAGTCTCTTGTATCAGTCGCACCAATACCAAGAGTTTTGGGTCTTTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462274.2
CDS TCA 72 bp GTTTGGGGCATCCGCCTCTGGTTAGTTAGAGGTTGCTaGATCTGGTCAGAATATGATAAGGCAGAAACCTGT +
Preference number: 6 (lower is better)
Translates to: VWGIRLWLVRGC*IWSEYDKAETC
Trigger: ACAGGTTTCTGCCTTATCATATTCTGACCAGATTCAGCAACCTCTAACTAACCAGAGGCGGATGCCCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000642309.1
ENST00000643551.1
ENST00000643624.1
ENST00000643854.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS GCA 72 bp ATGAAAATGACGGTGCAAGCCGAACAGATGAAGGTTTaGATGCTGAAGTCTCTCCTCCTGTATGCATCGTCT +
Preference number: 6 (lower is better)
Translates to: MKMTVQAEQMKV*MLKSLLLYASS
Trigger: AGACGATGCATACAGGAGGAGAGACTTCAGCATGCAAACCTTCATCTGTTCGGCTTGCACCGTCATTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338785.8
ENST00000398960.7
ENST00000426672.6
ENST00000643551.1
ENST00000643624.1
ENST00000644942.1
ENST00000645424.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
CDS GCA 72 bp CCAAGAGATGTTCCTGGTCAAGGGCACTGGGGCCGCTaGAGAAGAAATACCAAAACTTCTTCAATTCTACAT +
Preference number: 6 (lower is better)
Translates to: PRDVPGQGHWGR*RRNTKTSSILH
Trigger: ATGTAGAATTGAAGAAGTTTTGGTATTTCTTCTGCAGCGGCCCCAGTGCCCTTGACCAGGAACATCTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS GCA 72 bp AAGAGACTGGGGAGGAGCCTGAGATCTTGTTGCAGATaGCCCAAAAATGGTTCCACAACCACTAAGAACATA +
Preference number: 6 (lower is better)
Translates to: KRLGRSLRSCCR*PKNGSTTTKNI
Trigger: TATGTTCTTAGTGGTTGTGGAACCATTTTTGGGGCATCTGCAACAAGATCTCAGGCTCCTCCCCAGTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643355.1
CDS TCA 72 bp GTTGCATATGTTGGCCAAGTTCCTAGGTCAGCCTCATaGAAACTACTGACTCCAAGAGATGTTCCTGGTCAA +
Preference number: 6 (lower is better)
Translates to: VAYVGQVPRSAS*KLLTPRDVPGQ
Trigger: TTGACCAGGAACATCTCTTGGAGTCAGTAGTTTTCATGAGGCTGACCTAGGAACTTGGCCAACATATGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS CAA 72 bp AATATGATAAGGCAGAAACCTGTTGGTCACTTATGTTaGGCTGGCGACGGTCACTGTACTGATGTGAATGGG +
Preference number: 6 (lower is better)
Translates to: NMIRQKPVGHLC*AGDGHCTDVNG
Trigger: CCCATTCACATCAGTACAGTGACCGTCGCCAGCCAAACATAAGTGACCAACAGGTTTCTGCCTTATCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000426672.6
ENST00000642309.1
ENST00000643551.1
ENST00000643624.1
ENST00000643854.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS TCA 72 bp GCCCCAACTGACAAGAACTGCCAAAGTCAACTATCTTaGTTGCACTGCGTTTGGGGTTACAAAGAAGGATAT +
Preference number: 6 (lower is better)
Translates to: APTDKNCQSQLS*LHCVWGYKEGY
Trigger: ATATCCTTCTTTGTAACCCCAAACGCAGTGCAATCAAGATAGTTGACTTTGGCAGTTCTTGTCAGTTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644367.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646224.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS CCA 72 bp AGAAAAGAACCATTAACTCAAAGTTTTGGTGTGGGTTaGGGCACACTGCGCTGTTTGCCTGTTTGTTTACCT +
Preference number: 6 (lower is better)
Translates to: RKEPLTQSFGVG*GTLRCLPVCLP
Trigger: AGGTAAACAAACAGGCAAACAGCGCAGTGTGCCCCAACCCACACCAAAACTTTGAGTTAATGGTTCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643355.1
CDS CAA 72 bp ATAAAGCACAAGGAGAAAGACCCAAAACTCTTGGTATaGGTGCGACTGATACAAGAGACTAAGACTGCCTGC +
Preference number: 6 (lower is better)
Translates to: IKHKEKDPKLLV*VRLIQETKTAC
Trigger: GCAGGCAGTCTTAGTCTCTTGTATCAGTCGCACCAATACCAAGAGTTTTGGGTCTTTCTCCTTGTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462274.2
CDS CAA 90 bp AGTGCCATCTGGCAACTTCTCAAAGAACTTTCTTGCTTTTGGTGCTaGGTCAAGAATATGAGCAGGTGGAATACCCAGAACTTCCACTAT +
Preference number: 6 (lower is better)
Translates to: SAIWQLLKELSCFWC*VKNMSRWNTQNFHY
Trigger: ATAGTGGAAGTTCTGGGTATTCCACCTGCTCATATTCTTGACCAAGCACCAAAAGCAAGAAAGTTCTTTGAGAAGTTGCCAGATGGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644367.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646224.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS CAA 90 bp AGTTCCAAGTGCCATCTGGCAACTTCTCAAAGAACTTTCTTGCTTTaGGTGCTTGGTCAAGAATATGAGCAGGTGGAATACCCAGAACTT +
Preference number: 6 (lower is better)
Translates to: SSKCHLATSQRTFLL*VLGQEYEQVEYPEL
Trigger: AAGTTCTGGGTATTCCACCTGCTCATATTCTTGACCAAGCACCAAAAGCAAGAAAGTTCTTTGAGAAGTTGCCAGATGGCACTTGGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644367.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646224.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS TCA 72 bp TACAAGAGACTAAGACTGCCTGCCTGCTTAGAGGTCTaGTATAGTTACAACATGAAGTGGGAGAAAAAGCCA +
Preference number: 6 (lower is better)
Translates to: YKRLRLPACLEV*YSYNMKWEKKP
Trigger: TGGCTTTTTCTCCCACTTCATGTTGTAACTATATCAGACCTCTAAGCAGGCAGGCAGTCTTAGTCTCTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462274.2
CDS TCA 72 bp GCTGAAGGGAATGTCCTGATCCCAGCTCAAAACATATaGAAACAGTGGGGAGTAGAATCTAAGTCAAACAAG +
Preference number: 6 (lower is better)
Translates to: AEGNVLIPAQNI*KQWGVESKSNK
Trigger: CTTGTTTGACTTAGATTCTACTCCCCACTGTTTTCATATGTTTTGAGCTGGGATCAGGACATTCCCTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646351.1
CDS TCA 72 bp CAAAGTTGGAACAAAAATCTCCTGAATTCTACAAAATaGAAAGCCTCTCCTGGAAGAGACCTGCAGTGGGAG +
Preference number: 6 (lower is better)
Translates to: QSWNKNLLNSTK*KASPGRDLQWE
Trigger: CTCCCACTGCAGGTCTCTTCCAGGAGAGGCTTTTCATTTTGTAGAATTCAGGAGATTTTTGTTCCAACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646351.1
CDS CCA 72 bp TTCCACTCCAAGAATGTTATGAAGTTTACGGGTTCCTaGTGGTTTGTACTCCCGTTTTCCATCTTTGGTCTT +
Preference number: 6 (lower is better)
Translates to: FHSKNVMKFTGS*WFVLPFSIFGL
Trigger: AAGACCAAAGATGGAAAACGGGAGTACAAACCACCAGGAACCCGTAAACTTCATAACATTCTTGGAGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644367.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646224.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS CAA 72 bp TGGCAACTTCTCAAAGAACTTTCTTGCTTTTGGTGCTaGGTCAAGAATATGAGCAGGTGGAATACCCAGAAC +
Preference number: 6 (lower is better)
Translates to: WQLLKELSCFWC*VKNMSRWNTQN
Trigger: GTTCTGGGTATTCCACCTGCTCATATTCTTGACCAAGCACCAAAAGCAAGAAAGTTCTTTGAGAAGTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644367.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646224.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS CAA 72 bp TGCCATCTGGCAACTTCTCAAAGAACTTTCTTGCTTTaGGTGCTTGGTCAAGAATATGAGCAGGTGGAATAC +
Preference number: 6 (lower is better)
Translates to: CHLATSQRTFLL*VLGQEYEQVEY
Trigger: GTATTCCACCTGCTCATATTCTTGACCAAGCACCAAAAGCAAGAAAGTTCTTTGAGAAGTTGCCAGATGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644367.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646224.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS CAA 90 bp TCTTTAAGTTCCAAGTGCCATCTGGCAACTTCTCAAAGAACTTTCTaGCTTTTGGTGCTTGGTCAAGAATATGAGCAGGTGGAATACCCA +
Preference number: 6 (lower is better)
Translates to: SLSSKCHLATSQRTF*LLVLGQEYEQVEYP
Trigger: TGGGTATTCCACCTGCTCATATTCTTGACCAAGCACCAAAAGCAAGAAAGTTCTTTGAGAAGTTGCCAGATGGCACTTGGAACTTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644367.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646224.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS TCA 72 bp ACAATATCAGGCATCACCTGGTTAGTTAGAGGTTGCTaGATCTGGTCAGAATATGATAAGGCAGAAACCTGT +
Preference number: 6 (lower is better)
Translates to: TISGITWLVRGC*IWSEYDKAETC
Trigger: ACAGGTTTCTGCCTTATCATATTCTGACCAGATTCAGCAACCTCTAACTAACCAGGTGATGCCTGATATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000426672.6
ENST00000462274.2
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646523.1
CDS TCA 72 bp CGTGTATCAAATAAGGTCAGTGTTTCTGAACACAAGTaGCTATGGCTCTGTGCTGATCTTAAGGTCTGTATC +
Preference number: 6 (lower is better)
Translates to: RVSNKVSVSEHK*LWLCADLKVCI
Trigger: GATACAGACCTTAAGATCAGCACAGAGCCATAGTCACTTGTGTTCAGAAACACTGACCTTATTTGATACACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643355.1
CDS CAA 90 bp TCAAAGTTTTGGTGTGGGTTGGGGCACACTGCGCTGTTTGCCTGTTaGTTTACCTATGTAGTATTTCATTTCAGTGTCATGTTTGTTCAT +
Preference number: 6 (lower is better)
Translates to: SKFWCGLGHTALFAC*FTYVVFHFSVMFVH
Trigger: ATGAACAAACATGACACTGAAATGAAATACTACATAGGTAAACAAACAGGCAAACAGCGCAGTGTGCCCCAACCCACACCAAAACTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643355.1
CDS GCA 72 bp CAACTGACAAGAACTGCCAAAGTCAACTATCTTGATTaGACTGCGTTTGGGGTTACAAAGAAGGATATTTTC +
Preference number: 6 (lower is better)
Translates to: QLTRTAKVNYLD*TAFGVTKKDIF
Trigger: GAAAATATCCTTCTTTGTAACCCCAAACGCAGTGCAATCAAGATAGTTGACTTTGGCAGTTCTTGTCAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644367.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646224.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS CCA 72 bp TCTTGCTTTTGGTGCTTGGTCAAGAATATGAGCAGGTaGAATACCCAGAACTTCCACTATTTTATTCATCTG +
Preference number: 6 (lower is better)
Translates to: SCFWCLVKNMSR*NTQNFHYFIHL
Trigger: CAGATGAATAAAATAGTGGAAGTTCTGGGTATTCCACCTGCTCATATTCTTGACCAAGCACCAAAAGCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644367.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646224.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS TCA 72 bp AAGAACTTTCTTGCTTTTGGTGCTTGGTCAAGAATATaGGCAGGTGGAATACCCAGAACTTCCACTATTTTA +
Preference number: 6 (lower is better)
Translates to: KNFLAFGAWSRI*AGGIPRTSTIL
Trigger: TAAAATAGTGGAAGTTCTGGGTATTCCACCTGCTCATATTCTTGACCAAGCACCAAAAGCAAGAAAGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644367.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646224.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS TCA 72 bp GATCATTGTGTAAGTCAATCATCCTTAGAATGTCCTTaGTGTGCTTCTAAAACCCTTGAATGGAAATGGGTC +
Preference number: 6 (lower is better)
Translates to: DHCVSQSSLECP*CASKTLEWKWV
Trigger: GACCCATTTCCATTCAAGGGTTTTAGAAGCACATCAAGGACATTCTAAGGATGATTGACTTACACAATGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643355.1
CDS CAA 72 bp TTTCTTGAAGAAACTGTGCTGCAGAGCATAATAAGGTaGAATTCGAGTTTTGGGGTCATAATCAAGCATCCT +
Preference number: 6 (lower is better)
Translates to: FLEETVLQSIIR*NSSFGVIIKHP
Trigger: AGGATGCTTGATTATGACCCCAAAACTCGAATTCAACCTTATTATGCTCTGCAGCACAGTTTCTTCAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000643624.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646224.1
ENST00000646351.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS TCA 72 bp CTATGTAGTATTTCATTTCAGTGTCATGTTTGTTCATaGGCTCAAGAAGTCGCACTTCTATCTGTGCTTGAT +
Preference number: 6 (lower is better)
Translates to: LCSISFQCHVCS*AQEVALLSVLD
Trigger: ATCAAGCACAGATAGAAGTGCGACTTCTTGAGCTCATGAACAAACATGACACTGAAATGAAATACTACATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643355.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS TCA 72 bp GACGAAAGCAGAACAAATATTTGGCAAGACTGTATCTaGGGATTTTCAAAAACTGATGATAGAGATCAACCC +
Preference number: 6 (lower is better)
Translates to: DESRTNIWQDCI*GFSKTDDRDQP
Trigger: GGGTTGATCTCTATCATCAGTTTTTGAAAATCCTCAGATACAGTCTTGCCAAATATTTGTTCTGCTTTCGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646351.1
CDS CCA 72 bp ACAGAAAACAGAATGAATAAACCAGACAGAGACCTCTaGGATAATATTCAGCACTGTAACATACACATCACT +
Preference number: 6 (lower is better)
Translates to: TENRMNKPDRDL*DNIQHCNIHIT
Trigger: AGTGATGTGTATGTTACAGTGCTGAATATTATCCCAGAGGTCTCTGTCTGGTTTATTCATTCTGTTTTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646351.1
CDS CAA 90 bp GTCATGTTTGTTCATGAGCTCAAGAAGTCGCACTTCTATCTGTGCTaGATTCAGAAAAGCCTTCTTGTTCTTTATTATTTTAATGGCAAC +
Preference number: 6 (lower is better)
Translates to: VMFVHELKKSHFYLC*IQKSLLVLYYFNGN
Trigger: GTTGCCATTAAAATAATAAAGAACAAGAAGGCTTTTCTGAATCAAGCACAGATAGAAGTGCGACTTCTTGAGCTCATGAACAAACATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643355.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS CAA 90 bp ATGATGTCATCCCAATCATCCTGCTTAATAATCCTTTTCCCTAAGTaGTTTTACACTCCTAAATTACTATACAAAGCTCCTATTGCCTCA +
Preference number: 6 (lower is better)
Translates to: MMSSQSSCLIILFPK*FYTPKLLYKAPIAS
Trigger: TGAGGCAATAGGAGCTTTGTATAGTAATTTAGGAGTGTAAAACAACTTAGGGAAAAGGATTATTAAGCAGGATGATTGGGATGACATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS GCA 72 bp TTTGTTCATGAGCTCAAGAAGTCGCACTTCTATCTGTaGTTGATTCAGAAAAGCCTTCTTGTTCTTTATTAT +
Preference number: 6 (lower is better)
Translates to: FVHELKKSHFYL*LIQKSLLVLYY
Trigger: ATAATAAAGAACAAGAAGGCTTTTCTGAATCAAGCACAGATAGAAGTGCGACTTCTTGAGCTCATGAACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000338785.8
ENST00000398956.2
ENST00000398960.7
ENST00000642309.1
ENST00000643355.1
ENST00000643624.1
ENST00000643808.1
ENST00000643854.1
ENST00000644942.1
ENST00000645424.1
ENST00000645774.1
ENST00000646523.1
ENST00000646548.1
ENST00000647188.2
ENST00000647425.1
ENST00000647504.1
CDS CCA 72 bp ACACTATTCTCATTTGTTTCTACATGGTATGCTACATaGAAGGCACATTCCCCAAGATTTAGACTATTACTA +
Preference number: 6 (lower is better)
Translates to: TLFSFVSTWYAT*KAHSPRFRLLL
Trigger: TAGTAATAGTCTAAATCTTGGGGAATGTGCCTTCCATGTAGCATACCATGTAGAAACAAATGAGAATAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643355.1
CDS TCA 72 bp ACTTCCTACTTATTGCTTCCACTGATAACTCATGGTTaGCCAGAAAAATTCATAATGACTTACAGGAAAATG +
Preference number: 6 (lower is better)
Translates to: TSYLLLPLITHG*PEKFIMTYRKM
Trigger: CATTTTCCTGTAAGTCATTATGAATTTTTCTGGTCAACCATGAGTTATCAGTGGAAGCAATAAGTAGGAAGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646548.1
CDS CAA 72 bp TCCCAATCATCCTGCTTAATAATCCTTTTCCCTAAGTaGTTTTACACTCCTAAATTACTATACAAAGCTCCT +
Preference number: 6 (lower is better)
Translates to: SQSSCLIILFPK*FYTPKLLYKAP
Trigger: AGGAGCTTTGTATAGTAATTTAGGAGTGTAAAACAACTTAGGGAAAAGGATTATTAAGCAGGATGATTGGGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646548.1