Pregenerated sensors for DYNLT2B (Homo sapiens)
Ensembl gene IDs: ENSG00000213123Ensembl transcript IDs: ENST00000325318.10, ENST00000426563.5, ENST00000446494.1, ENST00000491186.5
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGCCATGAATACTCCTTCACCTCTTTGTTCTCCAATCACTACTTaGACCACCATTTTGTATCGGTCAAATCCCATTTCTTTTAATTTA | + |
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Preference number: 1 (lower is better) Translates to: EAMNTPSPLCSPITT*TTILYRSNPISFNL Trigger: TAAATTAAAAGAAATGGGATTTGACCGATACAAAATGGTGGTGCAAGTAGTGATTGGAGAACAAAGAGGTGAAGGAGTATTCATGGCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| 3UTR-3UTR GCA 90 bp | GTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATGAATACTCCTTCACCTCTTCTCCAATCACTACTTaGACCACCATTTTGTATCGG | + |
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Preference number: 2 (lower is better) Translates to: VSVSIPETARSHEYSFTSSPITT*TTILYR Trigger: CCGATACAAAATGGTGGTGCAAGTAGTGATTGGAGA...AGAGGTGAAGGAGTATTCATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| 3UTR GCA 72 bp | AATACTCCTTCACCTCTTTGTTCTCCAATCACTACTTaGACCACCATTTTGTATCGGTCAAATCCCATTTCT | + |
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Preference number: 3 (lower is better) Translates to: NTPSPLCSPITT*TTILYRSNPIS Trigger: AGAAATGGGATTTGACCGATACAAAATGGTGGTGCAAGTAGTGATTGGAGAACAAAGAGGTGAAGGAGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| CDS-3UTR TCA 90 bp | GTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATGAATACTCCTTCACCGGGCGTAGCTCGCGATaGAGGCCTAGCGGGTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: VVSVSIPETARSHEYSFTGRSSR*RPSGLR Trigger: CCGCAACCCGCTAGGCCTTCATCGCGAGCTACGCCC...GGTGAAGGAGTATTCATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGACAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| CDS-3UTR GCA 90 bp | ATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATGCTGAAGGCCTAGCGGGTTaGGGTCGCGGCCGGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: IMSIVVSVSIPETARSHAEGLAG*GRGRQQ Trigger: CTGCTGCCGGCCGCGACCGCAACCCGCTAGGCCTTC...AGCATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446494.1 |
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| CDS-3UTR GCA 90 bp | ATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATGCTCGATGGACGTGGCCATaGCGGGGCTTCTCGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IMSIVVSVSIPETARSHARWTWP*RGFSVR Trigger: CCGGACCGAGAAGCCCCGGCATGGCCACGTCCATCG...AGCATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446494.1 |
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| CDS-3UTR TCA 90 bp | AACATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATGGGCGTAGCTCGCGATaGAGGCCTAGCGGGTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: NIMSIVVSVSIPETARSHGRSSR*RPSGLR Trigger: CCGCAACCCGCTAGGCCTTCATCGCGAGCTACGCCC...ATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426563.5 ENST00000446494.1 |
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| CDS-3UTR GCA 90 bp | GAAAACATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCGATGGACGTGGCCATaGCGGGGCTTCTCGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ENIMSIVVSVSIPETARSRWTWP*RGFSVR Trigger: CCGGACCGAGAAGCCCCGGCATGGCCACGTCCATCG...GCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGATGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000426563.5 ENST00000446494.1 |
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| CDS-3UTR CCA 90 bp | AGGCATTTCTTCTGGAGAATATTCAGCATTTGCCAGTTCCTCCTTGAGCACAGCACACTCCGATGGACGTaGCCATGCCGGGGCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RHFFWRIFSICQFLLEHSTLRWT*PCRGFS Trigger: CGAGAAGCCCCGGCATGGCCACGTCCATCGGAGTGT...GCTGTGCTCAAGGAGGAACTGGCAAATGCTGAATATTCTCCAGAAGAAATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| CDS-3UTR CCA 90 bp | AGGCATTTCTTCTGGAGAATATTCAGCATTTGCCAGTTCCTCCTTGAGCACAGCAGAAGGACACTCCGATaGACGTGGCCATGCCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RHFFWRIFSICQFLLEHSRRTLR*TWPCRG Trigger: GCCCCGGCATGGCCACGTCCATCGGAGTGTCCTTCT...GCTGTGCTCAAGGAGGAACTGGCAAATGCTGAATATTCTCCAGAAGAAATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| CDS-3UTR GCA 90 bp | ATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATGCTCCGGCAGGCAGAGGTTaGAGTGAGCCGAGATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: IMSIVVSVSIPETARSHAPAGRG*SEPRSC Trigger: GCATGATCTCGGCTCACTGCAACCTCTGCCTGCCGG...AGCATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446494.1 |
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| CDS-3UTR CCA 90 bp | AACATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATACACTCCGATGGACGTaGCCATGCCGGGGCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NIMSIVVSVSIPETARSHTLRWT*PCRGFS Trigger: CGAGAAGCCCCGGCATGGCCACGTCCATCGGAGTGT...ATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000426563.5 ENST00000446494.1 |
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| CDS-3UTR CCA 90 bp | AACATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATAGAAGGACACTCCGATaGACGTGGCCATGCCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: NIMSIVVSVSIPETARSHRRTLR*TWPCRG Trigger: GCCCCGGCATGGCCACGTCCATCGGAGTGTCCTTCT...ATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000426563.5 ENST00000446494.1 |
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| CDS-3UTR GCA 90 bp | GAAAACATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCGTTCTCGGGCTCCCCTaGGTTCTTCTCAGCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: ENIMSIVVSVSIPETARSVLGLP*VLLSLR Trigger: CCTGAGGCTGAGAAGAACGCAGGGGAGCCCGAGAAC...GCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGATGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000426563.5 ENST00000446494.1 |
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| CDS-3UTR GCA 90 bp | AACATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATGAGGGCCTGAACCTCTaGTGGAAAACAGGCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NIMSIVVSVSIPETARSHEGLNL*WKTGRR Trigger: TCTGCGGCCTGTTTTCCAGCAGAGGTTCAGGCCCTC...ATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446494.1 |
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| CDS-3UTR CCA 90 bp | ATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATGCTGGCCTGAACCTCTGCTaGAAAACAGGCCGCAGAATA | + |
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Preference number: 4 (lower is better) Translates to: IMSIVVSVSIPETARSHAGLNLC*KTGRRI Trigger: TATTCTGCGGCCTGTTTTCCAGCAGAGGTTCAGGCC...AGCATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446494.1 |
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| CDS-3UTR TCA 90 bp | ATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATGCTTTGCCAGTTCCTCCTTaGGCACAGCATGGATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: IMSIVVSVSIPETARSHALPVPP*AQHGYS Trigger: ACTGTATCCATGCTGTGCTCAAGGAGGAACTGGCAA...AGCATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446494.1 |
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| CDS-3UTR GCA 90 bp | CCAATCACTACTTGCACCACCATTTTGTATCGGTCAAATCCCATTTCTTTTAATGTTCTCGGGCTCCCCTaGGTTCTTCTCAGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PITTCTTILYRSNPISFNVLGLP*VLLSLR Trigger: CCTGAGGCTGAGAAGAACGCAGGGGAGCCCGAGAAC...ATTAAAAGAAATGGGATTTGACCGATACAAAATGGTGGTGCAAGTAGTGATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| CDS-3UTR TCA 90 bp | AGGCATTTCTTCTGGAGAATATTCAGCATTTGCCAGTTCCTCCTTGAGCACAGCAACAGCGAGAAGCCATaGATACTCCTTCACCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: RHFFWRIFSICQFLLEHSNSEKP*ILLHLF Trigger: AAAGAGGTGAAGGAGTATTCATGGCTTCTCGCTGTT...GCTGTGCTCAAGGAGGAACTGGCAAATGCTGAATATTCTCCAGAAGAAATGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| CDS-3UTR GCA 90 bp | GTCAGCATCCCAGAAACAGCGAGAAGCCATGAATACTCCTTCACCTCTTTGTTCTCTCCAATCACTACTTaGACCACCATTTTGTATCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSIPETARSHEYSFTSLFSPITT*TTILYR Trigger: CCGATACAAAATGGTGGTGCAAGTAGTGATTGGAGA...GAACAAAGAGGTGAAGGAGTATTCATGGCTTCTCGCTGTTTCTGGGATGCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| CDS-3UTR TCA 90 bp | GAATACTCCTTCACCTCTTTGTTCTCCAATCACTACTTGCACCACCATTTTGTATTGCCAGTTCCTCCTTaGGCACAGCATGGATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: EYSFTSLFSNHYLHHHFVLPVPP*AQHGYS Trigger: ACTGTATCCATGCTGTGCTCAAGGAGGAACTGGCAA...TACAAAATGGTGGTGCAAGTAGTGATTGGAGAACAAAGAGGTGAAGGAGTATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| CDS-3UTR GCA 90 bp | ATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATGCTTCTCCAATCACTACTTaGACCACCATTTTGTATCGG | + |
|
Preference number: 4 (lower is better) Translates to: IMSIVVSVSIPETARSHASPITT*TTILYR Trigger: CCGATACAAAATGGTGGTGCAAGTAGTGATTGGAGA...AGCATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446494.1 |
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| CDS-3UTR CCA 90 bp | AGGCATTTCTTCTGGAGAATATTCAGCATTTGCCAGTTCCTCCTTGAGCACAGCTCCTTGAGCACAGCATaGATACAGTCTTTAACCACA | + |
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Preference number: 4 (lower is better) Translates to: RHFFWRIFSICQFLLEHSSLSTA*IQSLTT Trigger: TGTGGTTAAAGACTGTATCCATGCTGTGCTCAAGGA...GCTGTGCTCAAGGAGGAACTGGCAAATGCTGAATATTCTCCAGAAGAAATGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| CDS-3UTR CCA 90 bp | ATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATGCTTCCTTGAGCACAGCATaGATACAGTCTTTAACCACA | + |
|
Preference number: 4 (lower is better) Translates to: IMSIVVSVSIPETARSHASLSTA*IQSLTT Trigger: TGTGGTTAAAGACTGTATCCATGCTGTGCTCAAGGA...AGCATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446494.1 |
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| 3UTR CAA 72 bp | GAAACAGCGAGAAGCCATGAATACTCCTTCACCTCTTaGTTCTCCAATCACTACTTGCACCACCATTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: ETARSHEYSFTS*FSNHYLHHHFV Trigger: TACAAAATGGTGGTGCAAGTAGTGATTGGAGAACAAAGAGGTGAAGGAGTATTCATGGCTTCTCGCTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| CDS-3UTR CCA 90 bp | GAAAACATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCTGAGGCATTTCTTCTaGAGAATATTCAGCATTTGC | + |
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Preference number: 4 (lower is better) Translates to: ENIMSIVVSVSIPETARSLRHFF*RIFSIC Trigger: GCAAATGCTGAATATTCTCCAGAAGAAATGCCTCAG...GCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGATGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000426563.5 ENST00000446494.1 |
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| 3UTR CAA 72 bp | CCTCTTTGTTCTCCAATCACTACTTGCACCACCATTTaGTATCGGTCAAATCCCATTTCTTTTAATTTATCT | + |
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Preference number: 4 (lower is better) Translates to: PLCSPITTCTTI*YRSNPISFNLS Trigger: AGATAAATTAAAAGAAATGGGATTTGACCGATACAAAATGGTGGTGCAAGTAGTGATTGGAGAACAAAGAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| CDS TCA 90 bp | GGACGTGGCCATGCCGGGGCTTCTCGGTCCGGGCGTAGCTCGCGATaGAGGCCTAGCGGGTTGCGGTCGCGGCCGGCAGCAGGGAAAGCG | + |
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Preference number: 5 (lower is better) Translates to: GRGHAGASRSGRSSR*RPSGLRSRPAAGKA Trigger: CGCTTTCCCTGCTGCCGGCCGCGACCGCAACCCGCTAGGCCTTCATCGCGAGCTACGCCCGGACCGAGAAGCCCCGGCATGGCCACGTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325318.10 ENST00000446494.1 |
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| CDS GCA 90 bp | GGGCTTCTCGGTCCGGGCGTAGCTCGCGATGAAGGCCTAGCGGGTTaGGGTCGCGGCCGGCAGCAGGGAAAGCGTCTCCAGGGCAACAGG | + |
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Preference number: 5 (lower is better) Translates to: GLLGPGVARDEGLAG*GRGRQQGKRLQGNR Trigger: CCTGTTGCCCTGGAGACGCTTTCCCTGCTGCCGGCCGCGACCGCAACCCGCTAGGCCTTCATCGCGAGCTACGCCCGGACCGAGAAGCCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446494.1 |
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| CDS CCA 90 bp | TCTGGAGAATATTCAGCATTTGCCAGTTCCTCCTTGAGCACAGCATaGATACAGTCTTTAACCACAGAGGGCCTGAACCCGCCTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: SGEYSAFASSSLSTA*IQSLTTEGLNPPLL Trigger: CAGCAGAGGCGGGTTCAGGCCCTCTGTGGTTAAAGACTGTATCCATGCTGTGCTCAAGGAGGAACTGGCAAATGCTGAATATTCTCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| CDS-3UTR CAA 90 bp | ATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATGCTAGGCAGGAGAATCACTaGAACCCGGCAGGCAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: IMSIVVSVSIPETARSHARQENH*NPAGRG Trigger: ACCTCTGCCTGCCGGGTTCAAGTGATTCTCCTGCCT...AGCATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446494.1 |
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| CDS-3UTR CAA 90 bp | GTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATGAATACTCCTTCACCTCTTTTGCCAGTTCCTCCTaGAGCACAGCATGGATACAG | + |
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Preference number: 5 (lower is better) Translates to: VSVSIPETARSHEYSFTSFASSS*STAWIQ Trigger: CTGTATCCATGCTGTGCTCAAGGAGGAACTGGCAAA...AGAGGTGAAGGAGTATTCATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| CDS GCA 90 bp | CCCTGGCTCCTTGGGTGGATAACTCTGAACTGTGTTCTACGACAGTaGTGTGATAAAGGACCTGCTTTGTTTTTAACTTCCGGTCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PWLLGWITLNCVLRQ*CDKGPALFLTSGPS Trigger: TGAAGGACCGGAAGTTAAAAACAAAGCAGGTCCTTTATCACAGCACTGTCGTAGAACACAGTTCAGAGTTATCCACCCAAGGAGCCAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491186.5 |
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| CDS CCA 90 bp | TCTGGAGAATATTCAGCATTTGCCAGTTCCTCCTTGAGCACAGCATaGATACAGTCTTTAACCACAGAGGGCCTGAACCTCTGCTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: SGEYSAFASSSLSTA*IQSLTTEGLNLCWK Trigger: TTTCCAGCAGAGGTTCAGGCCCTCTGTGGTTAAAGACTGTATCCATGCTGTGCTCAAGGAGGAACTGGCAAATGCTGAATATTCTCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325318.10 ENST00000446494.1 |
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| CDS-3UTR CAA 90 bp | ATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATGCTTTTGCCAGTTCCTCCTaGAGCACAGCATGGATACAG | + |
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Preference number: 5 (lower is better) Translates to: IMSIVVSVSIPETARSHAFASSS*STAWIQ Trigger: CTGTATCCATGCTGTGCTCAAGGAGGAACTGGCAAA...AGCATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446494.1 |
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| CDS-3UTR CAA 90 bp | GTCAGCATCCCAGAAACAGCGAGAAGCCATGAATACTCCTTCACCTCTTTGTTCACTTGCACCACCATTTaGTATCGGTCAAATCCCATT | + |
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Preference number: 5 (lower is better) Translates to: VSIPETARSHEYSFTSLFTCTTI*YRSNPI Trigger: AATGGGATTTGACCGATACAAAATGGTGGTGCAAGT...GAACAAAGAGGTGAAGGAGTATTCATGGCTTCTCGCTGTTTCTGGGATGCTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| CDS-3UTR CAA 90 bp | AGGCATTTCTTCTGGAGAATATTCAGCATTTGCCAGTTCCTCCTTGAGCACAGCTACTCCTTCACCTCTTaGTTCTCCAATCACTACTTG | + |
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Preference number: 5 (lower is better) Translates to: RHFFWRIFSICQFLLEHSYSFTS*FSNHYL Trigger: CAAGTAGTGATTGGAGAACAAAGAGGTGAAGGAGTA...GCTGTGCTCAAGGAGGAACTGGCAAATGCTGAATATTCTCCAGAAGAAATGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| CDS-3UTR CAA 90 bp | AACATCATGAGTATAGTTGTCAGTGTCAGCATCCCAGAAACAGCGAGAAGCCATACTTGCACCACCATTTaGTATCGGTCAAATCCCATT | + |
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Preference number: 5 (lower is better) Translates to: NIMSIVVSVSIPETARSHTCTTI*YRSNPI Trigger: AATGGGATTTGACCGATACAAAATGGTGGTGCAAGT...ATGGCTTCTCGCTGTTTCTGGGATGCTGACACTGACAACTATACTCATGATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426563.5 ENST00000446494.1 |
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| CDS GCA 90 bp | ATGTTTTGTAAGCTGAGGCATTTCTTCTGGAGAATATTCAGCATTTaGCAGTTCCTCCTTGAGCACAGCATGGATACAGTCTTTAACCAC | + |
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Preference number: 5 (lower is better) Translates to: MFCKLRHFFWRIFSI*QFLLEHSMDTVFNH Trigger: GTGGTTAAAGACTGTATCCATGCTGTGCTCAAGGAGGAACTGGCAAATGCTGAATATTCTCCAGAAGAAATGCCTCAGCTTACAAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000325318.10 ENST00000426563.5 ENST00000446494.1 |
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| CDS GCA 90 bp | CACTCCAGCAATACTCCTTCACCTCTTTGTTCTCCAATCACTACTTaGACCACCATTTTGTATCGGTCAAATCCCATTTCTTTTAATTTA | + |
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Preference number: 5 (lower is better) Translates to: HSSNTPSPLCSPITT*TTILYRSNPISFNL Trigger: TAAATTAAAAGAAATGGGATTTGACCGATACAAAATGGTGGTGCAAGTAGTGATTGGAGAACAAAGAGGTGAAGGAGTATTGCTGGAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446494.1 |
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| CDS TCA 72 bp | CATGCCGGGGCTTCTCGGTCCGGGCGTAGCTCGCGATaGAGGCCTAGCGGGTTGCGGTCGCGGCCGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: HAGASRSGRSSR*RPSGLRSRPAA Trigger: TGCTGCCGGCCGCGACCGCAACCCGCTAGGCCTTCATCGCGAGCTACGCCCGGACCGAGAAGCCCCGGCATG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325318.10 ENST00000446494.1 |
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| CDS CCA 72 bp | CAGGCACCCCGTCGCCCACCGAGAAGGACACTCCGATaGACGTGGCCATGCCGGGGCTTCTCGGTCCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: QAPRRPPRRTLR*TWPCRGFSVRA Trigger: CGCCCGGACCGAGAAGCCCCGGCATGGCCACGTCCATCGGAGTGTCCTTCTCGGTGGGCGACGGGGTGCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000325318.10 ENST00000426563.5 ENST00000446494.1 |
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| CDS GCA 72 bp | GGTCCGGGCGTAGCTCGCGATGAAGGCCTAGCGGGTTaGGGTCGCGGCCGGCAGCAGGGAAAGCGTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GPGVARDEGLAG*GRGRQQGKRLQ Trigger: CTGGAGACGCTTTCCCTGCTGCCGGCCGCGACCGCAACCCGCTAGGCCTTCATCGCGAGCTACGCCCGGACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325318.10 ENST00000446494.1 |
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| CDS GCA 72 bp | AACAGGCCGCAGAATATAGGTGTTCTCGGGCTCCCCTaGGTTCTTCTCAGCCTCAGGCACCCCGTCGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: NRPQNIGVLGLP*VLLSLRHPVAH Trigger: GTGGGCGACGGGGTGCCTGAGGCTGAGAAGAACGCAGGGGAGCCCGAGAACACCTATATTCTGCGGCCTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000325318.10 ENST00000426563.5 ENST00000446494.1 |
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| CDS CCA 72 bp | TATTCAGCATTTGCCAGTTCCTCCTTGAGCACAGCATaGATACAGTCTTTAACCACAGAGGGCCTGAACCCG | + |
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Preference number: 6 (lower is better) Translates to: YSAFASSSLSTA*IQSLTTEGLNP Trigger: CGGGTTCAGGCCCTCTGTGGTTAAAGACTGTATCCATGCTGTGCTCAAGGAGGAACTGGCAAATGCTGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426563.5 |
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| CDS CCA 72 bp | TATTCAGCATTTGCCAGTTCCTCCTTGAGCACAGCATaGATACAGTCTTTAACCACAGAGGGCCTGAACCTC | + |
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Preference number: 6 (lower is better) Translates to: YSAFASSSLSTA*IQSLTTEGLNL Trigger: GAGGTTCAGGCCCTCTGTGGTTAAAGACTGTATCCATGCTGTGCTCAAGGAGGAACTGGCAAATGCTGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325318.10 ENST00000446494.1 |
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| CDS CAA 72 bp | TCTTCTGGAGAATATTCAGCATTTGCCAGTTCCTCCTaGAGCACAGCATGGATACAGTCTTTAACCACAGAG | + |
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Preference number: 6 (lower is better) Translates to: SSGEYSAFASSS*STAWIQSLTTE Trigger: CTCTGTGGTTAAAGACTGTATCCATGCTGTGCTCAAGGAGGAACTGGCAAATGCTGAATATTCTCCAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000325318.10 ENST00000426563.5 ENST00000446494.1 |
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| CDS CAA 72 bp | TGTGTTCTACGACAGTGCTGTGATAAAGGACCTGCTTaGTTTTTAACTTCCGGTCCTTCATGGAAGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: CVLRQCCDKGPA*FLTSGPSWKDA Trigger: AGCATCCTTCCATGAAGGACCGGAAGTTAAAAACAAAGCAGGTCCTTTATCACAGCACTGTCGTAGAACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491186.5 |
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| CDS GCA 72 bp | CTTGGGTGGATAACTCTGAACTGTGTTCTACGACAGTaGTGTGATAAAGGACCTGCTTTGTTTTTAACTTCC | + |
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Preference number: 6 (lower is better) Translates to: LGWITLNCVLRQ*CDKGPALFLTS Trigger: GGAAGTTAAAAACAAAGCAGGTCCTTTATCACAGCACTGTCGTAGAACACAGTTCAGAGTTATCCACCCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491186.5 |
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