Pregenerated sensors for DYNLT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000146425Ensembl transcript IDs: ENST00000367085.3, ENST00000367088.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCTGACTTGGCAGTGAGTCTTCCTCCCTGTCTGGCTGCTGTCCACTaGAGGCCCTGCCCTTTCTTTTTAGGGGGTTCAGGAGCTGACTGC | + |
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Preference number: 5 (lower is better) Translates to: PDLAVSLPPCLAAVH*RPCPFFLGGSGADC Trigger: GCAGTCAGCTCCTGAACCCCCTAAAAAGAAAGGGCAGGGCCTGCAGTGGACAGCAGCCAGACAGGGAGGAAGACTCACTGCCAAGTCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367088.1 |
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| CDS CCA 90 bp | AGGACTAACCACCAGCTGCCAGCATGGCTGTTCTCTGTCAGTGTCTaGATGACTCAGGAGGTGGGCTGCCTGCAGGAATCTAGTGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RTNHQLPAWLFSVSV*MTQEVGCLQESSAR Trigger: CCTGGCACTAGATTCCTGCAGGCAGCCCACCTCCTGAGTCATCCAGACACTGACAGAGAACAGCCATGCTGGCAGCTGGTGGTTAGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367088.1 |
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| CDS TCA 90 bp | TGTCCACTGCAGGCCCTGCCCTTTCTTTTTAGGGGGTTCAGGAGCTaGCTGCCCGAAGCCACCTCACTTGCTGTACTCAGAAGTCGGACT | + |
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Preference number: 5 (lower is better) Translates to: CPLQALPFLFRGFRS*LPEATSLAVLRSRT Trigger: AGTCCGACTTCTGAGTACAGCAAGTGAGGTGGCTTCGGGCAGTCAGCTCCTGAACCCCCTAAAAAGAAAGGGCAGGGCCTGCAGTGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367088.1 |
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| CDS GCA 90 bp | CACTGCAGGCCCTGCCCTTTCTTTTTAGGGGGTTCAGGAGCTGACTaGCCGAAGCCACCTCACTTGCTGTACTCAGAAGTCGGACTTGGA | + |
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Preference number: 5 (lower is better) Translates to: HCRPCPFFLGGSGAD*PKPPHLLYSEVGLG Trigger: TCCAAGTCCGACTTCTGAGTACAGCAAGTGAGGTGGCTTCGGGCAGTCAGCTCCTGAACCCCCTAAAAAGAAAGGGCAGGGCCTGCAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367088.1 |
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| CDS TCA 90 bp | TATACTACACACACGACCGACTCCCACCAGGAGCCTTCCTTGAGTTaGGCCACGTTAGCTGTTGTTTCTGGTACTGGATGCCCCTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: YTTHTTDSHQEPSLS*ATLAVVSGTGCPSD Trigger: ATCAGAGGGGCATCCAGTACCAGAAACAACAGCTAACGTGGCTCAACTCAAGGAAGGCTCCTGGTGGGAGTCGGTCGTGTGTGTAGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367085.3 ENST00000367088.1 |
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| CDS GCA 90 bp | GCATGGCTGTTCTCTGTCAGTGTCTGGATGACTCAGGAGGTGGGCTaGCTGCAGGAATCTAGTGCCAGGAGTATAGTTTTCCTTTTACAC | + |
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Preference number: 5 (lower is better) Translates to: AWLFSVSVWMTQEVG*LQESSARSIVFLLH Trigger: GTGTAAAAGGAAAACTATACTCCTGGCACTAGATTCCTGCAGGCAGCCCACCTCCTGAGTCATCCAGACACTGACAGAGAACAGCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367088.1 |
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| CDS TCA 90 bp | AAAATAACATTAGTCAGGCACTTGCCTGCCAATGTGCTCTTCACATaGGCACAAGCGTTTAAAGTTACTGCTGAGTCCCAGGAAAGGTAC | + |
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Preference number: 5 (lower is better) Translates to: KITLVRHLPANVLFT*AQAFKVTAESQERY Trigger: GTACCTTTCCTGGGACTCAGCAGTAACTTTAAACGCTTGTGCTCATGTGAAGAGCACATTGGCAGGCAAGTGCCTGACTAATGTTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367088.1 |
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| CDS GCA 72 bp | CTTCGAGAGGGCAACCCCTGGGGCCCTCAGTCAACGTaGATCCTGAGGGAATCAAGGCAGAGAACCCTGACT | + |
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Preference number: 6 (lower is better) Translates to: LREGNPWGPQST*ILRESRQRTLT Trigger: AGTCAGGGTTCTCTGCCTTGATTCCCTCAGGATGCACGTTGACTGAGGGCCCCAGGGGTTGCCCTCTCGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367088.1 |
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| CDS CCA 72 bp | CACCAGCTGCCAGCATGGCTGTTCTCTGTCAGTGTCTaGATGACTCAGGAGGTGGGCTGCCTGCAGGAATCT | + |
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Preference number: 6 (lower is better) Translates to: HQLPAWLFSVSV*MTQEVGCLQES Trigger: AGATTCCTGCAGGCAGCCCACCTCCTGAGTCATCCAGACACTGACAGAGAACAGCCATGCTGGCAGCTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367088.1 |
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| CDS CAA 90 bp | TCAGTCAACGTGCATCCTGAGGGAATCAAGGCAGAGAACCCTGACTaGGCAGTGAGTCTTCCTCCCTGTCTGGCTGCTGTCCACTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SVNVHPEGIKAENPD*AVSLPPCLAAVHCR Trigger: CCTGCAGTGGACAGCAGCCAGACAGGGAGGAAGACTCACTGCCAAGTCAGGGTTCTCTGCCTTGATTCCCTCAGGATGCACGTTGACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367088.1 |
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| CDS TCA 72 bp | CAGGCCCTGCCCTTTCTTTTTAGGGGGTTCAGGAGCTaGCTGCCCGAAGCCACCTCACTTGCTGTACTCAGA | + |
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Preference number: 6 (lower is better) Translates to: QALPFLFRGFRS*LPEATSLAVLR Trigger: TCTGAGTACAGCAAGTGAGGTGGCTTCGGGCAGTCAGCTCCTGAACCCCCTAAAAAGAAAGGGCAGGGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367088.1 |
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| CDS TCA 72 bp | CACACGACCGACTCCCACCAGGAGCCTTCCTTGAGTTaGGCCACGTTAGCTGTTGTTTCTGGTACTGGATGC | + |
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Preference number: 6 (lower is better) Translates to: HTTDSHQEPSLS*ATLAVVSGTGC Trigger: GCATCCAGTACCAGAAACAACAGCTAACGTGGCTCAACTCAAGGAAGGCTCCTGGTGGGAGTCGGTCGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367085.3 ENST00000367088.1 |
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| CDS GCA 72 bp | CCCTGCCCTTTCTTTTTAGGGGGTTCAGGAGCTGACTaGCCGAAGCCACCTCACTTGCTGTACTCAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: PCPFFLGGSGAD*PKPPHLLYSEV Trigger: GACTTCTGAGTACAGCAAGTGAGGTGGCTTCGGGCAGTCAGCTCCTGAACCCCCTAAAAAGAAAGGGCAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367088.1 |
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| CDS GCA 72 bp | GGGGTTCAGGAGCTGACTGCCCGAAGCCACCTCACTTaGTGTACTCAGAAGTCGGACTTGGAAACAAAACCA | + |
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Preference number: 6 (lower is better) Translates to: GVQELTARSHLT*CTQKSDLETKP Trigger: TGGTTTTGTTTCCAAGTCCGACTTCTGAGTACAGCAAGTGAGGTGGCTTCGGGCAGTCAGCTCCTGAACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367088.1 |
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| CDS CAA 72 bp | ACACACGACCGACTCCCACCAGGAGCCTTCCTTGAGTaGAGCCACGTTAGCTGTTGTTTCTGGTACTGGATG | + |
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Preference number: 6 (lower is better) Translates to: THDRLPPGAFLE*SHVSCCFWYWM Trigger: CATCCAGTACCAGAAACAACAGCTAACGTGGCTCAACTCAAGGAAGGCTCCTGGTGGGAGTCGGTCGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367085.3 ENST00000367088.1 |
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| CDS GCA 72 bp | TTCTCTGTCAGTGTCTGGATGACTCAGGAGGTGGGCTaGCTGCAGGAATCTAGTGCCAGGAGTATAGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: FSVSVWMTQEVG*LQESSARSIVF Trigger: GAAAACTATACTCCTGGCACTAGATTCCTGCAGGCAGCCCACCTCCTGAGTCATCCAGACACTGACAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367088.1 |
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| CDS CAA 72 bp | CCTCCTGTAAGATCCCGCTTCACATACGATCTGCAATaGTACCAGCAGCCAAATGGTCAAGCGTACGCTAAC | + |
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Preference number: 6 (lower is better) Translates to: PPVRSRFTYDLQ*YQQPNGQAYAN Trigger: GTTAGCGTACGCTTGACCATTTGGCTGCTGGTACAATTGCAGATCGTATGTGAAGCGGGATCTTACAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367085.3 ENST00000367088.1 |
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| CDS CAA 90 bp | CTGATGGGACCTCCTGTAAGATCCCGCTTCACATACGATCTGCAATaGTACCAGCAGCCAAATGGTCAAGCGTACGCTAACGTATACTAC | + |
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Preference number: 6 (lower is better) Translates to: LMGPPVRSRFTYDLQ*YQQPNGQAYANVYY Trigger: GTAGTATACGTTAGCGTACGCTTGACCATTTGGCTGCTGGTACAATTGCAGATCGTATGTGAAGCGGGATCTTACAGGAGGTCCCATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367085.3 ENST00000367088.1 |
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| CDS TCA 72 bp | TTAGTCAGGCACTTGCCTGCCAATGTGCTCTTCACATaGGCACAAGCGTTTAAAGTTACTGCTGAGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LVRHLPANVLFT*AQAFKVTAESQ Trigger: CTGGGACTCAGCAGTAACTTTAAACGCTTGTGCTCATGTGAAGAGCACATTGGCAGGCAAGTGCCTGACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367088.1 |
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| CDS CAA 72 bp | AAAAATTATAGGGACAGATTGCCTTGTCTCACTATATaGACAAATTATAGGTGCTCCTTGACTTACAACATC | + |
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Preference number: 6 (lower is better) Translates to: KNYRDRLPCLTI*TNYRCSLTYNI Trigger: GATGTTGTAAGTCAAGGAGCACCTATAATTTGTCAATATAGTGAGACAAGGCAATCTGTCCCTATAATTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367085.3 ENST00000367088.1 |
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