Pregenerated sensors for DYNLL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000088986Ensembl transcript IDs: ENST00000392509.6, ENST00000548214.1, ENST00000548342.5, ENST00000549649.5, ENST00000549989.1, ENST00000550178.1, ENST00000550845.5, ENST00000552316.1
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCTGGTCTTCTCCACAGGAGCGCAAAATGCATCTGCGTCCTTTCTaGAAGCTTCTACGCCCCAAGCCGCCAGCAGTATTCCCGGGACCT | + |
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Preference number: 1 (lower is better) Translates to: VWSSPQERKMHLRPF*KLLRPKPPAVFPGP Trigger: AGGTCCCGGGAATACTGCTGGCGGCTTGGGGCGTAGAAGCTTCCAGAAAGGACGCAGATGCATTTTGCGCTCCTGTGGAGAAGACCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| 3UTR GCA 90 bp | GCTTTCTTCCCTTCCAGCAAACACTGCTCGAGAAGTTGGCAGTCCTaGCGGCTTTCTAGACTGCCATTTACCAAGCCCCTACCCCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: AFFPSSKHCSRSWQS*RLSRLPFTKPLPQP Trigger: GGGCTGGGGTAGGGGCTTGGTAAATGGCAGTCTAGAAAGCCGGCAGGACTGCCAACTTCTCGAGCAGTGTTTGCTGGAAGGGAAGAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| 3UTR GCA 90 bp | CTCCCACGGCTTAGGCTGCCAGCTTTCTTCCCTTCCAGCAAACACTaGTCGAGAAGTTGGCAGTCCTGCCGGCTTTCTAGACTGCCATTT | + |
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Preference number: 1 (lower is better) Translates to: LPRLRLPAFFPSSKH*SRSWQSCRLSRLPF Trigger: AAATGGCAGTCTAGAAAGCCGGCAGGACTGCCAACTTCTCGAGCAGTGTTTGCTGGAAGGGAAGAAAGCTGGCAGCCTAAGCCGTGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| 3UTR GCA 90 bp | CTTTCATCTTCCCATTCTCGACTGGAACCCTCCCACGGCTTAGGCTaGCAGCTTTCTTCCCTTCCAGCAAACACTGCTCGAGAAGTTGGC | + |
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Preference number: 1 (lower is better) Translates to: LSSSHSRLEPSHGLG*QLSSLPANTAREVG Trigger: GCCAACTTCTCGAGCAGTGTTTGCTGGAAGGGAAGAAAGCTGGCAGCCTAAGCCGTGGGAGGGTTCCAGTCGAGAATGGGAAGATGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| 3UTR CCA 90 bp | CAGGAACACAATACTGAAGCACTCCACTGTTGCTGTAAAAACTGCTaGAAACAGAATCTGTCAACTGGCCAAATTTTATCCTTAATTATT | + |
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Preference number: 1 (lower is better) Translates to: QEHNTEALHCCCKNC*KQNLSTGQILSLII Trigger: AATAATTAAGGATAAAATTTGGCCAGTTGACAGATTCTGTTTCCAGCAGTTTTTACAGCAACAGTGGAGTGCTTCAGTATTGTGTTCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGATGGATCCTCGGCGCAGGAACCACACAGAAGGGGGAACCGCTGCTCCCTGCATCTGCGTCCTTTCTaGAAGCTTCTACGCCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: PDGSSAQEPHRRGNRCSLHLRPF*KLLRPK Trigger: CTTGGGGCGTAGAAGCTTCCAGAAAGGACGCAGATG...CAGGGAGCAGCGGTTCCCCCTTCTGTGTGGTTCCTGCGCCGAGGATCCATCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| 3UTR-3UTR GCA 90 bp | CACCCAGATGGATCCTCGGCGCAGGAACCACACAGAAGGGGGAACCGCTGCTCCAGCGCAAAATGCATCTaGGTCCTTTCTGGAAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: HPDGSSAQEPHRRGNRCSSAKCI*VLSGSF Trigger: GAAGCTTCCAGAAAGGACGCAGATGCATTTTGCGCT...GGAGCAGCGGTTCCCCCTTCTGTGTGGTTCCTGCGCCGAGGATCCATCTGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| 3UTR-3UTR CCA 90 bp | ACCCTGTCCACTAGGTTAGCAAGTTGTAGGAACAACTCTTCACCATTTCTCCCACGGACGCCGGGGGTCTaGTCTTCTCCACAGGAGCGC | + |
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Preference number: 2 (lower is better) Translates to: TLSTRLASCRNNSSPFLPRTPGV*SSPQER Trigger: GCGCTCCTGTGGAGAAGACCAGACCCCCGGCGTCCG...TGGGAGAAATGGTGAAGAGTTGTTCCTACAACTTGCTAACCTAGTGGACAGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| 3UTR-3UTR CCA 90 bp | TTAGGCTGCCAGCTTTCTTCCCTTCCAGCAAACACTGCTCGAGAAGTTGGCAGTCATCTGCGTCCTTTCTaGAAGCTTCTACGCCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: LGCQLSSLPANTAREVGSHLRPF*KLLRPK Trigger: CTTGGGGCGTAGAAGCTTCCAGAAAGGACGCAGATG...ACTGCCAACTTCTCGAGCAGTGTTTGCTGGAAGGGAAGAAAGCTGGCAGCCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| 3UTR-3UTR CCA 90 bp | AATTTACAGGAACACAATACTGAAGCACTCCACTGTTGCTGTAAAAACTGCTGGCACTGCTCGAGAAGTTaGCAGTCCTGCCGGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: NLQEHNTEALHCCCKNCWHCSRS*QSCRLS Trigger: AGAAAGCCGGCAGGACTGCCAACTTCTCGAGCAGTG...CCAGCAGTTTTTACAGCAACAGTGGAGTGCTTCAGTATTGTGTTCCTGTAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| 3UTR CAA 90 bp | TTGGGTGGCAACGGTTATCTTTCTCTGCAAAATTCTTACAAGTGTTaGTGGAGCGTCACACAAGATTTAGCTACTCTAACTGCACGCAGT | + |
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Preference number: 2 (lower is better) Translates to: LGGNGYLSLQNSYKC*WSVTQDLATLTARS Trigger: ACTGCGTGCAGTTAGAGTAGCTAAATCTTGTGTGACGCTCCACAAACACTTGTAAGAATTTTGCAGAGAAAGATAACCGTTGCCACCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| 3UTR-3UTR TCA 90 bp | AAGTGTTTGTGGAGCGTCACACAAGATTTAGCTACTCTAACTGCACGCAGTGCGTATTTCTGTTCCATCTaGAGTCTTTCATCTTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: KCLWSVTQDLATLTARSAYFCSI*SLSSSH Trigger: ATGGGAAGATGAAAGACTTCAGATGGAACAGAAATA...CGCACTGCGTGCAGTTAGAGTAGCTAAATCTTGTGTGACGCTCCACAAACACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| 3UTR GCA 72 bp | TCCTCGGCGCAGGAACCACACAGAAGGGGGAACCGCTaGTCCCTGATCTTAGATACCGTTGCTAGGTGGCGC | + |
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Preference number: 3 (lower is better) Translates to: SSAQEPHRRGNR*SLILDTVARWR Trigger: GCGCCACCTAGCAACGGTATCTAAGATCAGGGAGCAGCGGTTCCCCCTTCTGTGTGGTTCCTGCGCCGAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| 3UTR GCA 72 bp | TCCCATTCTCGACTGGAACCCTCCCACGGCTTAGGCTaGCAGCTTTCTTCCCTTCCAGCAAACACTGCTCGA | + |
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Preference number: 3 (lower is better) Translates to: SHSRLEPSHGLG*QLSSLPANTAR Trigger: TCGAGCAGTGTTTGCTGGAAGGGAAGAAAGCTGGCAGCCTAAGCCGTGGGAGGGTTCCAGTCGAGAATGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| 3UTR CCA 72 bp | TCTCCACAGGAGCGCAAAATGCATCTGCGTCCTTTCTaGAAGCTTCTACGCCCCAAGCCGCCAGCAGTATTC | + |
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Preference number: 3 (lower is better) Translates to: SPQERKMHLRPF*KLLRPKPPAVF Trigger: GAATACTGCTGGCGGCTTGGGGCGTAGAAGCTTCCAGAAAGGACGCAGATGCATTTTGCGCTCCTGTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| 3UTR CCA 72 bp | TCCCACCCTAAGAGGTACTGGGGAGTAGAATGCCTGTaGGGGGCATTGGGTGGCAACGGTTATCTTTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: SHPKRYWGVECL*GALGGNGYLSL Trigger: CAGAGAAAGATAACCGTTGCCACCCAATGCCCCCCACAGGCATTCTACTCCCCAGTACCTCTTAGGGTGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| 3UTR GCA 72 bp | CCTTCCAGCAAACACTGCTCGAGAAGTTGGCAGTCCTaGCGGCTTTCTAGACTGCCATTTACCAAGCCCCTA | + |
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Preference number: 3 (lower is better) Translates to: PSSKHCSRSWQS*RLSRLPFTKPL Trigger: TAGGGGCTTGGTAAATGGCAGTCTAGAAAGCCGGCAGGACTGCCAACTTCTCGAGCAGTGTTTGCTGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| 3UTR GCA 72 bp | CTTAGGCTGCCAGCTTTCTTCCCTTCCAGCAAACACTaGTCGAGAAGTTGGCAGTCCTGCCGGCTTTCTAGA | + |
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Preference number: 3 (lower is better) Translates to: LRLPAFFPSSKH*SRSWQSCRLSR Trigger: TCTAGAAAGCCGGCAGGACTGCCAACTTCTCGAGCAGTGTTTGCTGGAAGGGAAGAAAGCTGGCAGCCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| 3UTR GCA 72 bp | AATTTACAGGAACACAATACTGAAGCACTCCACTGTTaGTGTAAAAACTGCTGGAAACAGAATCTGTCAACT | + |
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Preference number: 3 (lower is better) Translates to: NLQEHNTEALHC*CKNCWKQNLST Trigger: AGTTGACAGATTCTGTTTCCAGCAGTTTTTACAGCAACAGTGGAGTGCTTCAGTATTGTGTTCCTGTAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR GCA 90 bp | GAAGCTTCTACGCCCCAAGCCGCCAGCAGTATTCCCGGGACCTGTCAGGCGCCCGGGGAAGGAACCCCCTaGTCCCGGCTGCGTATCGGC | + |
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Preference number: 4 (lower is better) Translates to: EASTPQAASSIPGTCQAPGEGTP*SRLRIG Trigger: GCCGATACGCAGCCGGGAGCAGGGGGTTCCTTCCCC...GGGCGCCTGACAGGTCCCGGGAATACTGCTGGCGGCTTGGGGCGTAGAAGCTTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000548214.1 ENST00000550178.1 ENST00000550845.5 |
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| CDS-3UTR CCA 90 bp | CACCCAGATGGATCCTCGGCGCAGGAACCACACAGAAGGGGGAACCGCTGCTCCCGGACGCCGGGGGTCTaGTCTTCTCCACAGGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: HPDGSSAQEPHRRGNRCSRTPGV*SSPQER Trigger: GCGCTCCTGTGGAGAAGACCAGACCCCCGGCGTCCG...GGAGCAGCGGTTCCCCCTTCTGTGTGGTTCCTGCGCCGAGGATCCATCTGGGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| CDS-3UTR GCA 90 bp | CTTCGGACGCCGGGGGTCTGGTCTTCTCCACAGGAGCGCAAAATGCATCTGCGTGGGGAAGGAACCCCCTaGTCCCGGCTGCGTATCGGC | + |
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Preference number: 4 (lower is better) Translates to: LRTPGVWSSPQERKMHLRGEGTP*SRLRIG Trigger: GCCGATACGCAGCCGGGAGCAGGGGGTTCCTTCCCC...ACGCAGATGCATTTTGCGCTCCTGTGGAGAAGACCAGACCCCCGGCGTCCGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| CDS-3UTR CCA 90 bp | TGGAAGCTTCTACGCCCCAAGCCGCCAGCAGTATTCCCGGGACCTGTCAGGCGCCCGAGTTTCTCACCGTaGAGAAGGGGGCTGGCCGAC | + |
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Preference number: 4 (lower is better) Translates to: WKLLRPKPPAVFPGPVRRPSFSP*RRGLAD Trigger: GTCGGCCAGCCCCCTTCTCCACGGTGAGAAACTCGG...GCGCCTGACAGGTCCCGGGAATACTGCTGGCGGCTTGGGGCGTAGAAGCTTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550178.1 |
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| CDS-3UTR CCA 90 bp | CTTCGGACGCCGGGGGTCTGGTCTTCTCCACAGGAGCGCAAAATGCATCTGCGTCGGACGCCGGGGGTCTaGTCTTCTCCACAGGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: LRTPGVWSSPQERKMHLRRTPGV*SSPQER Trigger: GCGCTCCTGTGGAGAAGACCAGACCCCCGGCGTCCG...ACGCAGATGCATTTTGCGCTCCTGTGGAGAAGACCAGACCCCCGGCGTCCGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| CDS-3UTR GCA 90 bp | CCGGGGGTCTGGTCTTCTCCACAGGAGCGCAAAATGCATCTGCGTCCTTTCTGGGGGGAAGGAACCCCCTaGTCCCGGCTGCGTATCGGC | + |
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Preference number: 4 (lower is better) Translates to: PGVWSSPQERKMHLRPFWGEGTP*SRLRIG Trigger: GCCGATACGCAGCCGGGAGCAGGGGGTTCCTTCCCC...CCAGAAAGGACGCAGATGCATTTTGCGCTCCTGTGGAGAAGACCAGACCCCCGG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| CDS-3UTR CCA 90 bp | GAAGCTTCTACGCCCCAAGCCGCCAGCAGTATTCCCGGGACCTGTCAGGCGCCCGGGCTAAGTCCGGAGTaGGGCGAAATAAGGCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: EASTPQAASSIPGTCQAPGLSPE*GEIRQR Trigger: TCGCTGCCTTATTTCGCCCCACTCCGGACTTAGCCC...GGGCGCCTGACAGGTCCCGGGAATACTGCTGGCGGCTTGGGGCGTAGAAGCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550178.1 |
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| CDS-3UTR CCA 90 bp | GAAGCTTCTACGCCCCAAGCCGCCAGCAGTATTCCCGGGACCTGTCAGGCGCCCCTAGTGGGCAAGGCCTaGGGTAAGGGGTTGAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: EASTPQAASSIPGTCQAPLVGKA*GKGLSW Trigger: CCAACTCAACCCCTTACCCCAGGCCTTGCCCACTAG...GGGCGCCTGACAGGTCCCGGGAATACTGCTGGCGGCTTGGGGCGTAGAAGCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000550178.1 |
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| CDS-3UTR CCA 90 bp | CCCAGATGGATCCTCGGCGCAGGAACCACACAGAAGGGGGAACCGCTGCTCCCTTCCGGAACACCCAGATaGATCCTCGGCGCAGGAACC | + |
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Preference number: 4 (lower is better) Translates to: PRWILGAGTTQKGEPLLPSGTPR*ILGAGT Trigger: GGTTCCTGCGCCGAGGATCCATCTGGGTGTTCCGGA...AGGGAGCAGCGGTTCCCCCTTCTGTGTGGTTCCTGCGCCGAGGATCCATCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| CDS-3UTR CCA 90 bp | GGAAGCTTCTACGCCCCAAGCCGCCAGCAGTATTCCCGGGACCTGTCAGGCGCCCCTTTCGGTCGCACATaGTTACCTAGTGGGCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: GSFYAPSRQQYSRDLSGAPFGRT*LPSGQG Trigger: GCCTTGCCCACTAGGTAACCATGTGCGACCGAAAGG...GGCGCCTGACAGGTCCCGGGAATACTGCTGGCGGCTTGGGGCGTAGAAGCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000550178.1 ENST00000550845.5 |
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| CDS-3UTR CCA 90 bp | CCTTTCTGGAAGCTTCTACGCCCCAAGCCGCCAGCAGTATTCCCGGGACCTGTCTCCCCACTGGAAGGCTaGCAAGATCTCCTCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: PFWKLLRPKPPAVFPGPVSPLEG*QDLLPA Trigger: GGCCGGGAGGAGATCTTGCCAGCCTTCCAGTGGGGA...GACAGGTCCCGGGAATACTGCTGGCGGCTTGGGGCGTAGAAGCTTCCAGAAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR CCA 90 bp | GGACGCCGGGGGTCTGGTCTTCTCCACAGGAGCGCAAAATGCATCTGCGTCCTTTCCGGAACACCCAGATaGATCCTCGGCGCAGGAACC | + |
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Preference number: 4 (lower is better) Translates to: GRRGSGLLHRSAKCICVLSGTPR*ILGAGT Trigger: GGTTCCTGCGCCGAGGATCCATCTGGGTGTTCCGGA...AAGGACGCAGATGCATTTTGCGCTCCTGTGGAGAAGACCAGACCCCCGGCGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| CDS-3UTR CCA 90 bp | GGGTCTGGTCTTCTCCACAGGAGCGCAAAATGCATCTGCGTCCTTTCTGGAAGCTCCTCCCGGCCCGGCTaGAAACACCCACGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GSGLLHRSAKCICVLSGSSSRPG*KHPRSS Trigger: GGAGCTGCGTGGGTGTTTCCAGCCGGGCCGGGAGGA...GCTTCCAGAAAGGACGCAGATGCATTTTGCGCTCCTGTGGAGAAGACCAGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR CCA 90 bp | CTTCGGACGCCGGGGGTCTGGTCTTCTCCACAGGAGCGCAAAATGCATCTGCGTCCCTCAACTCCCCACTaGAAGGCTGGCAAGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: LRTPGVWSSPQERKMHLRPSTPH*KAGKIS Trigger: GGAGATCTTGCCAGCCTTCCAGTGGGGAGTTGAGGG...ACGCAGATGCATTTTGCGCTCCTGTGGAGAAGACCAGACCCCCGGCGTCCGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR TCA 90 bp | TGGAAGCTTCTACGCCCCAAGCCGCCAGCAGTATTCCCGGGACCTGTCAGGCGCCCATCCTCACCTTCTTaGTATGAGCCGCAATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: WKLLRPKPPAVFPGPVRRPSSPS*YEPQCP Trigger: AGGACATTGCGGCTCATATCAAGAAGGTGAGGATGG...GCGCCTGACAGGTCCCGGGAATACTGCTGGCGGCTTGGGGCGTAGAAGCTTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548214.1 ENST00000550178.1 ENST00000550845.5 |
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| CDS-3UTR CCA 90 bp | TTCGGACGCCGGGGGTCTGGTCTTCTCCACAGGAGCGCAAAATGCATCTGCGTCCACTGCTCGAGAAGTTaGCAGTCCTGCCGGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: FGRRGSGLLHRSAKCICVHCSRS*QSCRLS Trigger: AGAAAGCCGGCAGGACTGCCAACTTCTCGAGCAGTG...GACGCAGATGCATTTTGCGCTCCTGTGGAGAAGACCAGACCCCCGGCGTCCGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR CCA 90 bp | CCCTCCGGAACACCCAGATGGATCCTCGGCGCAGGAACCACACAGAAGGGGGAACACCCTAAGAGGTACTaGGGAGTAGAATGCCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: PSGTPRWILGAGTTQKGEHPKRY*GVECLW Trigger: CCACAGGCATTCTACTCCCCAGTACCTCTTAGGGTG...TTCCCCCTTCTGTGTGGTTCCTGCGCCGAGGATCCATCTGGGTGTTCCGGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR GCA 90 bp | ACACCCAGATGGATCCTCGGCGCAGGAACCACACAGAAGGGGGAACCGCTGCTCCACAGGAGCGCAAAATaGATCTGCGTCCTTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: TPRWILGAGTTQKGEPLLHRSAK*ICVLSG Trigger: TCCAGAAAGGACGCAGATGCATTTTGCGCTCCTGTG...GAGCAGCGGTTCCCCCTTCTGTGTGGTTCCTGCGCCGAGGATCCATCTGGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| CDS-3UTR CCA 90 bp | GGACGCCGGGGGTCTGGTCTTCTCCACAGGAGCGCAAAATGCATCTGCGTCCTTCATCTGCGTCCTTTCTaGAAGCTTCTACGCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: GRRGSGLLHRSAKCICVLHLRPF*KLLRPK Trigger: CTTGGGGCGTAGAAGCTTCCAGAAAGGACGCAGATG...AAGGACGCAGATGCATTTTGCGCTCCTGTGGAGAAGACCAGACCCCCGGCGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| CDS-3UTR CCA 90 bp | GCCGGGGGTCTGGTCTTCTCCACAGGAGCGCAAAATGCATCTGCGTCCTTTCTGCATCTGCGTCCTTTCTaGAAGCTTCTACGCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: AGGLVFSTGAQNASASFLHLRPF*KLLRPK Trigger: CTTGGGGCGTAGAAGCTTCCAGAAAGGACGCAGATG...CAGAAAGGACGCAGATGCATTTTGCGCTCCTGTGGAGAAGACCAGACCCCCGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| CDS-3UTR TCA 90 bp | CACAGAAGGGGGAACCGCTGCTCCCTGATCTTAGATACCGTTGCTAGGTGGCGCCCATCCTCACCTTCTTaGTATGAGCCGCAATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: HRRGNRCSLILDTVARWRPSSPS*YEPQCP Trigger: AGGACATTGCGGCTCATATCAAGAAGGTGAGGATGG...GCGCCACCTAGCAACGGTATCTAAGATCAGGGAGCAGCGGTTCCCCCTTCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| CDS-3UTR TCA 90 bp | CCCAGATGGATCCTCGGCGCAGGAACCACACAGAAGGGGGAACCGCTGCTCCCTAACCTTTTAAAGCTATaGAGGGGAGTAACGCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: PRWILGAGTTQKGEPLLPNLLKL*RGVTLL Trigger: CAAGAGCGTTACTCCCCTTCATAGCTTTAAAAGGTT...AGGGAGCAGCGGTTCCCCCTTCTGTGTGGTTCCTGCGCCGAGGATCCATCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR GCA 90 bp | CACAGAAGGGGGAACCGCTGCTCCCTGATCTTAGATACCGTTGCTAGGTGGCGCCACAGGAGCGCAAAATaGATCTGCGTCCTTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: HRRGNRCSLILDTVARWRHRSAK*ICVLSG Trigger: TCCAGAAAGGACGCAGATGCATTTTGCGCTCCTGTG...GCGCCACCTAGCAACGGTATCTAAGATCAGGGAGCAGCGGTTCCCCCTTCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| CDS-3UTR GCA 90 bp | TCCCACGGCTTAGGCTGCCAGCTTTCTTCCCTTCCAGCAAACACTGCTCGAGAATCCCACGGCTTAGGCTaGCAGCTTTCTTCCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SHGLGCQLSSLPANTARESHGLG*QLSSLP Trigger: TGGAAGGGAAGAAAGCTGGCAGCCTAAGCCGTGGGA...TTCTCGAGCAGTGTTTGCTGGAAGGGAAGAAAGCTGGCAGCCTAAGCCGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR CCA 90 bp | GGTCTGGTCTTCTCCACAGGAGCGCAAAATGCATCTGCGTCCTTTCTGGAAGCTGGAGTAGAATGCCTGTaGGGGGCATTGGGTGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: GLVFSTGAQNASASFLEAGVECL*GALGGN Trigger: GTTGCCACCCAATGCCCCCCACAGGCATTCTACTCC...AGCTTCCAGAAAGGACGCAGATGCATTTTGCGCTCCTGTGGAGAAGACCAGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR TCA 90 bp | AACTTCGGACGCCGGGGGTCTGGTCTTCTCCACAGGAGCGCAAAATGCATCTGCACAGGAACACAATACTaGAGCACTCCACTGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: NFGRRGSGLLHRSAKCICTGTQY*STPLLL Trigger: CAGCAACAGTGGAGTGCTTCAGTATTGTGTTCCTGT...GCAGATGCATTTTGCGCTCCTGTGGAGAAGACCAGACCCCCGGCGTCCGAAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR GCA 90 bp | ACCCAGATGGATCCTCGGCGCAGGAACCACACAGAAGGGGGAACCGCTGCTCCCTCTAACTGCACGCAGTaGGAAAACCTTTTAAAGCTA | + |
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Preference number: 4 (lower is better) Translates to: TQMDPRRRNHTEGGTAAPSNCTQ*ENLLKL Trigger: TAGCTTTAAAAGGTTTTCGCACTGCGTGCAGTTAGA...GGGAGCAGCGGTTCCCCCTTCTGTGTGGTTCCTGCGCCGAGGATCCATCTGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR TCA 90 bp | GGGTCTGGTCTTCTCCACAGGAGCGCAAAATGCATCTGCGTCCTTTCTGGAAGCCCATCCTCACCTTCTTaGTATGAGCCGCAATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GSGLLHRSAKCICVLSGSPSSPS*YEPQCP Trigger: AGGACATTGCGGCTCATATCAAGAAGGTGAGGATGG...GCTTCCAGAAAGGACGCAGATGCATTTTGCGCTCCTGTGGAGAAGACCAGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| CDS-3UTR GCA 90 bp | TGCGTCCTTTCTGGAAGCTTCTACGCCCCAAGCCGCCAGCAGTATTCCCGGGACGAAGCACTCCACTGTTaGTGTAAAAACTGCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: CVLSGSFYAPSRQQYSRDEALHC*CKNCWK Trigger: TTTCCAGCAGTTTTTACAGCAACAGTGGAGTGCTTC...GTCCCGGGAATACTGCTGGCGGCTTGGGGCGTAGAAGCTTCCAGAAAGGACGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR GCA 90 bp | GAACCACACAGAAGGGGGAACCGCTGCTCCCTGATCTTAGATACCGTTGCTAGGAGCGCAAAATGCATCTaGGTCCTTTCTGGAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: EPHRRGNRCSLILDTVARSAKCI*VLSGSF Trigger: GAAGCTTCCAGAAAGGACGCAGATGCATTTTGCGCT...CCTAGCAACGGTATCTAAGATCAGGGAGCAGCGGTTCCCCCTTCTGTGTGGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| CDS-3UTR GCA 90 bp | CTTCTCCACAGGAGCGCAAAATGCATCTGCGTCCTTTCTGGAAGCTTCTACGCCAGCGCAAAATGCATCTaGGTCCTTTCTGGAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LLHRSAKCICVLSGSFYASAKCI*VLSGSF Trigger: GAAGCTTCCAGAAAGGACGCAGATGCATTTTGCGCT...GGCGTAGAAGCTTCCAGAAAGGACGCAGATGCATTTTGCGCTCCTGTGGAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000548214.1 ENST00000550845.5 |
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| CDS-3UTR CCA 90 bp | AACAGCCGTCCTCTTCACATCTATCCGGATGATGCTAATCTACTACCCTGTCCACCTTTCGGTCGCACATaGTTACCTAGTGGGCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: NSRPLHIYPDDANLLPCPPFGRT*LPSGQG Trigger: GCCTTGCCCACTAGGTAACCATGTGCGACCGAAAGG...TGGACAGGGTAGTAGATTAGCATCATCCGGATAGATGTGAAGAGGACGGCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR TCA 90 bp | CCGGGGGTCTGGTCTTCTCCACAGGAGCGCAAAATGCATCTGCGTCCTTTCTGGTATTTCTGTTCCATCTaGAGTCTTTCATCTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: PGVWSSPQERKMHLRPFWYFCSI*SLSSSH Trigger: ATGGGAAGATGAAAGACTTCAGATGGAACAGAAATA...CCAGAAAGGACGCAGATGCATTTTGCGCTCCTGTGGAGAAGACCAGACCCCCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR GCA 90 bp | CGTCCTCTTCACATCTATCCGGATGATGCTAATCTACTACCCTGTCCACTAGGTCCTTCCAGCAAACACTaGTCGAGAAGTTGGCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: RPLHIYPDDANLLPCPLGPSSKH*SRSWQS Trigger: GGACTGCCAACTTCTCGAGCAGTGTTTGCTGGAAGG...ACCTAGTGGACAGGGTAGTAGATTAGCATCATCCGGATAGATGTGAAGAGGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR GCA 90 bp | TCCCTTCCAGCAAACACTGCTCGAGAAGTTGGCAGTCCTGCCGGCTTTCTAGACTTTAGCTACTCTAACTaGACGCAGTGCGAAAACCTT | + |
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Preference number: 4 (lower is better) Translates to: SLPANTAREVGSPAGFLDFSYSN*TQCENL Trigger: AAGGTTTTCGCACTGCGTGCAGTTAGAGTAGCTAAA...GTCTAGAAAGCCGGCAGGACTGCCAACTTCTCGAGCAGTGTTTGCTGGAAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR GCA 90 bp | GGGTCTGGTCTTCTCCACAGGAGCGCAAAATGCATCTGCGTCCTTTCTGGAAGCTGTTGCTGTAAAAACTaGTGGAAACAGAATCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: GSGLLHRSAKCICVLSGSCCCKN*WKQNLS Trigger: TGACAGATTCTGTTTCCAGCAGTTTTTACAGCAACA...GCTTCCAGAAAGGACGCAGATGCATTTTGCGCTCCTGTGGAGAAGACCAGACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR GCA 90 bp | AATTTACAGGAACACAATACTGAAGCACTCCACTGTTGCTGTAAAAACTGCTGGGCCGGCTTTCTAGACTaGCATTTACCAAGCCCCTAC | + |
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Preference number: 4 (lower is better) Translates to: NLQEHNTEALHCCCKNCWAGFLD*HLPSPY Trigger: GTAGGGGCTTGGTAAATGGCAGTCTAGAAAGCCGGC...CCAGCAGTTTTTACAGCAACAGTGGAGTGCTTCAGTATTGTGTTCCTGTAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR CCA 90 bp | GTCTGGTCTTCTCCACAGGAGCGCAAAATGCATCTGCGTCCTTTCTGGAAGCTTTCTTACAAGTGTTTGTaGAGCGTCACACAAGATTTA | + |
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Preference number: 4 (lower is better) Translates to: VWSSPQERKMHLRPFWKLSYKCL*SVTQDL Trigger: TAAATCTTGTGTGACGCTCCACAAACACTTGTAAGA...AAGCTTCCAGAAAGGACGCAGATGCATTTTGCGCTCCTGTGGAGAAGACCAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR GCA 90 bp | CACTGTTGCTGTAAAAACTGCTGGAAACAGAATCTGTCAACTGGCCAAATTTTACACAAAGATCTTAACTaGACCCCTGCAACACAAGAC | + |
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Preference number: 4 (lower is better) Translates to: HCCCKNCWKQNLSTGQILHKDLN*TPATQD Trigger: GTCTTGTGTTGCAGGGGTGCAGTTAAGATCTTTGTG...TAAAATTTGGCCAGTTGACAGATTCTGTTTCCAGCAGTTTTTACAGCAACAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS GCA 90 bp | CGGCCACCAGTGGCTCTGAGGTGGGGGCCGCGACAGCCCGGCCGCTaGGGGGTCAGCCTGCGGTCTCCGCCTGACTCCAGCTCTCCTGCG | + |
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Preference number: 5 (lower is better) Translates to: RPPVALRWGPRQPGR*GVSLRSPPDSSSPA Trigger: CGCAGGAGAGCTGGAGTCAGGCGGAGACCGCAGGCTGACCCCGCAGCGGCCGGGCTGTCGCGGCCCCCACCTCAGAGCCACTGGTGGCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000548342.5 ENST00000549649.5 |
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| CDS GCA 90 bp | GTCGCACATGGTTACCTGAGGTGGGGGCCGCGACAGCCCGGCCGCTaGGGGGTCAGCCTGCGGTCTCCGCCTGACTCCAGCTCTCCTGCG | + |
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Preference number: 5 (lower is better) Translates to: VAHGYLRWGPRQPGR*GVSLRSPPDSSSPA Trigger: CGCAGGAGAGCTGGAGTCAGGCGGAGACCGCAGGCTGACCCCGCAGCGGCCGGGCTGTCGCGGCCCCCACCTCAGGTAACCATGTGCGAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000392509.6 |
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| CDS TCA 90 bp | GAGTGCTCACAAGTCTGTGAGGTAGGCGGCGCCACAGAGAGAAACTaGGGCGCGGGAGCCCAAGCCACTTGTCCAGCGCCTCAGCCGAGC | + |
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Preference number: 5 (lower is better) Translates to: ECSQVCEVGGATERN*GAGAQATCPAPQPS Trigger: GCTCGGCTGAGGCGCTGGACAAGTGGCTTGGGCTCCCGCGCCTCAGTTTCTCTCTGTGGCGCCGCCTACCTCACAGACTTGTGAGCACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000392509.6 ENST00000548342.5 ENST00000549649.5 |
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| CDS-3UTR CAA 90 bp | CAGGAACCACACAGAAGGGGGAACCGCTGCTCCCTGATCTTAGATACCGTTGCTACACTGCTCGAGAAGTaGGCAGTCCTGCCGGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: QEPHRRGNRCSLILDTVATLLEK*AVLPAF Trigger: GAAAGCCGGCAGGACTGCCAACTTCTCGAGCAGTGT...AGCAACGGTATCTAAGATCAGGGAGCAGCGGTTCCCCCTTCTGTGTGGTTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS-3UTR CAA 90 bp | CCAGATGGATCCTCGGCGCAGGAACCACACAGAAGGGGGAACCGCTGCTCCCTGAATTCTTACAAGTGTTaGTGGAGCGTCACACAAGAT | + |
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Preference number: 5 (lower is better) Translates to: PDGSSAQEPHRRGNRCSLNSYKC*WSVTQD Trigger: ATCTTGTGTGACGCTCCACAAACACTTGTAAGAATT...CAGGGAGCAGCGGTTCCCCCTTCTGTGTGGTTCCTGCGCCGAGGATCCATCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550845.5 |
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| CDS CCA 90 bp | CTTTCGGTCGCACATGGTTACGAATTAAGGGATTATCCCCAAGAGTaGGGTCTCTGCCAAGCAATGCGGACATCCTTTAAGGGGTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: LSVAHGYELRDYPQE*GLCQAMRTSFKGLG Trigger: CCCCAACCCCTTAAAGGATGTCCGCATTGCTTGGCAGAGACCCCACTCTTGGGGATAATCCCTTAATTCGTAACCATGTGCGACCGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549649.5 |
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| CDS CCA 90 bp | AGTACATTAATACAAACATACTTGCAGTCTGAGCGAAGATGGGAATaGAGGCTGAGGAGGTCAAAGGACGAAAGGTCAGCCCTAAAGACA | + |
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Preference number: 5 (lower is better) Translates to: STLIQTYLQSERRWE*RLRRSKDERSALKT Trigger: TGTCTTTAGGGCTGACCTTTCGTCCTTTGACCTCCTCAGCCTCCATTCCCATCTTCGCTCAGACTGCAAGTATGTTTGTATTAATGTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552316.1 |
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| CDS TCA 72 bp | GCCCGGCCGCTGCGGGGTCAGCCTGCGGTCTCCGCCTaGCTCCAGCTCTCCTGCGCCCCGCAGGCCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: ARPLRGQPAVSA*LQLSCAPQALG Trigger: GCCCAGGGCCTGCGGGGCGCAGGAGAGCTGGAGTCAGGCGGAGACCGCAGGCTGACCCCGCAGCGGCCGGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000392509.6 ENST00000548342.5 ENST00000549649.5 |
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| CDS GCA 72 bp | GTGGCTCTGAGGTGGGGGCCGCGACAGCCCGGCCGCTaGGGGGTCAGCCTGCGGTCTCCGCCTGACTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VALRWGPRQPGR*GVSLRSPPDSS Trigger: GCTGGAGTCAGGCGGAGACCGCAGGCTGACCCCGCAGCGGCCGGGCTGTCGCGGCCCCCACCTCAGAGCCAC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000548342.5 ENST00000549649.5 |
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| CDS GCA 72 bp | GGTTACCTGAGGTGGGGGCCGCGACAGCCCGGCCGCTaGGGGGTCAGCCTGCGGTCTCCGCCTGACTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GYLRWGPRQPGR*GVSLRSPPDSS Trigger: GCTGGAGTCAGGCGGAGACCGCAGGCTGACCCCGCAGCGGCCGGGCTGTCGCGGCCCCCACCTCAGGTAACC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000392509.6 |
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| CDS CCA 72 bp | CCAGCGCCTCAGCCGAGCGCGAACCGCGCTCGGGGATaGCATCCACACGGCCCGGCCCCAGGCTCTCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: PAPQPSANRARG*HPHGPAPGSPC Trigger: ACAGGGAGAGCCTGGGGCCGGGCCGTGTGGATGCCATCCCCGAGCGCGGTTCGCGCTCGGCTGAGGCGCTGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392509.6 |
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| CDS CAA 90 bp | AGGCGGCGCCACAGAGAGAAACTGAGGCGCGGGAGCCCAAGCCACTaGTCCAGCGCCTCAGCCGAGCGCGAACCGCGCTCGGGGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: RRRHREKLRRGSPSH*SSASAEREPRSGMA Trigger: TGCCATCCCCGAGCGCGGTTCGCGCTCGGCTGAGGCGCTGGACAAGTGGCTTGGGCTCCCGCGCCTCAGTTTCTCTCTGTGGCGCCGCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000392509.6 ENST00000548342.5 ENST00000549649.5 |
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| CDS GCA 72 bp | GCCCCGCAGGCCCTGGGCGCTACCCACGTCAGTGAGTaGTCACAAGTCTGTGAGGTAGGCGGCGCCACAGAG | + |
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Preference number: 6 (lower is better) Translates to: APQALGATHVSE*SQVCEVGGATE Trigger: CTCTGTGGCGCCGCCTACCTCACAGACTTGTGAGCACTCACTGACGTGGGTAGCGCCCAGGGCCTGCGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000392509.6 ENST00000548342.5 ENST00000549649.5 |
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| CDS CCA 72 bp | CCGCCTGACTCCAGCTCTCCTGCGCCCCGCAGGCCCTaGGCGCTACCCACGTCAGTGAGTGCTCACAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: PPDSSSPAPRRP*ALPTSVSAHKS Trigger: AGACTTGTGAGCACTCACTGACGTGGGTAGCGCCCAGGGCCTGCGGGGCGCAGGAGAGCTGGAGTCAGGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000392509.6 ENST00000548342.5 ENST00000549649.5 |
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| CDS CCA 72 bp | AGGAAGCGCGGGCTACGCGGAGGGCTAAGTCCGGAGTaGGGCGAAATAAGGCAGCGAGGACACCCCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RKRGLRGGLSPE*GEIRQRGHPLA Trigger: GGCCAGGGGGTGTCCTCGCTGCCTTATTTCGCCCCACTCCGGACTTAGCCCTCCGCGTAGCCCGCGCTTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000549989.1 ENST00000550178.1 |
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| CDS CAA 72 bp | CACAGAGAGAAACTGAGGCGCGGGAGCCCAAGCCACTaGTCCAGCGCCTCAGCCGAGCGCGAACCGCGCTCG | + |
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Preference number: 6 (lower is better) Translates to: HREKLRRGSPSH*SSASAEREPRS Trigger: CGAGCGCGGTTCGCGCTCGGCTGAGGCGCTGGACAAGTGGCTTGGGCTCCCGCGCCTCAGTTTCTCTCTGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000392509.6 ENST00000548342.5 ENST00000549649.5 |
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| CDS TCA 72 bp | CAAGTCTGTGAGGTAGGCGGCGCCACAGAGAGAAACTaGGGCGCGGGAGCCCAAGCCACTTGTCCAGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: QVCEVGGATERN*GAGAQATCPAP Trigger: AGGCGCTGGACAAGTGGCTTGGGCTCCCGCGCCTCAGTTTCTCTCTGTGGCGCCGCCTACCTCACAGACTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000392509.6 ENST00000548342.5 ENST00000549649.5 |
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| CDS CAA 90 bp | TCCCCAGCTCCAAGCCGCCTACATAGTACATTAATACAAACATACTaGCAGTCTGAGCGAAGATGGGAATGGAGGCTGAGGAGGTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: SPAPSRLHSTLIQTY*QSERRWEWRLRRSK Trigger: CTTTGACCTCCTCAGCCTCCATTCCCATCTTCGCTCAGACTGCAAGTATGTTTGTATTAATGTACTATGTAGGCGGCTTGGAGCTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552316.1 |
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| CDS CCA 72 bp | GCACATGGTTACGAATTAAGGGATTATCCCCAAGAGTaGGGTCTCTGCCAAGCAATGCGGACATCCTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: AHGYELRDYPQE*GLCQAMRTSFK Trigger: CTTAAAGGATGTCCGCATTGCTTGGCAGAGACCCCACTCTTGGGGATAATCCCTTAATTCGTAACCATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549649.5 |
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| CDS CAA 72 bp | CCAAGCCGCCTACATAGTACATTAATACAAACATACTaGCAGTCTGAGCGAAGATGGGAATGGAGGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: PSRLHSTLIQTY*QSERRWEWRLR Trigger: CCTCAGCCTCCATTCCCATCTTCGCTCAGACTGCAAGTATGTTTGTATTAATGTACTATGTAGGCGGCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552316.1 |
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| CDS TCA 72 bp | GAAAGGAGGAACGTCAGCATCTGCAAATTCTTAGAATaGAAGAATGTTCCCCAGCTCCAAGCCGCCTACATA | + |
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Preference number: 6 (lower is better) Translates to: ERRNVSICKFLE*KNVPQLQAAYI Trigger: TATGTAGGCGGCTTGGAGCTGGGGAACATTCTTTCATTCTAAGAATTTGCAGATGCTGACGTTCCTCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552316.1 |
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