RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DYNC2H1 (Homo sapiens)

Ensembl gene IDs: ENSG00000187240

Ensembl transcript IDs: ENST00000334267.11, ENST00000375735.7, ENST00000525306.1, ENST00000528670.5, ENST00000533197.1, ENST00000648198.1, ENST00000649323.1, ENST00000650373.2

Found 562 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGTGCACTACAGTGAACTGTAGCAATTTGAGTGGACCGGAGTTGTaGAAATGCGTACCTGAGCAGCATCCCTTTGCCACATCCTTCTGG +
Preference number: 1 (lower is better)
Translates to: LCTTVNCSNLSGPEL*KCVPEQHPFATSFW
Trigger: CCAGAAGGATGTGGCAAAGGGATGCTGCTCAGGTACGCATTTTCACAACTCCGGTCCACTCAAATTGCTACAGTTCACTGTAGTGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 90 bp TATCCTCTGGAAATCTTTGGAGAAAACAGGACCGCTCCATGCATGTaGCTGACTAAAGAAGTGATGGTCCGACGACCTACACCACTGCGT +
Preference number: 1 (lower is better)
Translates to: YPLEIFGENRTAPCM*LTKEVMVRRPTPLR
Trigger: ACGCAGTGGTGTAGGTCGTCGGACCATCACTTCTTTAGTCAGTCACATGCATGGAGCGGTCCTGTTTTCTCCAAAGATTTCCAGAGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR GCA 90 bp CAAGACCTCTCAGGTATTGTAAGGGATCTTCTGGGCCTTCCCACTTaGTCTGCCATGCGAGAGGACACTTTTGGTTTAATAAAGCACTTG +
Preference number: 1 (lower is better)
Translates to: QDLSGIVRDLLGLPT*SAMREDTFGLIKHL
Trigger: CAAGTGCTTTATTAAACCAAAAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATCCCTTACAATACCTGAGAGGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR CCA 90 bp GGTCTGTATACACGACCAGTATTAGTACTGATTACCATGCAAGTCTaGCTCAGTTTCTGCAGGAGATGTCGAGAAGTGGTTTGTGCACTA +
Preference number: 1 (lower is better)
Translates to: GLYTRPVLVLITMQV*LSFCRRCREVVCAL
Trigger: TAGTGCACAAACCACTTCTCGACATCTCCTGCAGAAACTGAGCCAGACTTGCATGGTAATCAGTACTAATACTGGTCGTGTATACAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 90 bp AAGCATAAAATCTGTGAAGGGAACAGAGATGGGTCAACTGCACCTTaGGAACTTCGCCCAGTAGTAACACATTCCTTCAACAACTGTTCC +
Preference number: 1 (lower is better)
Translates to: KHKICEGNRDGSTAP*ELRPVVTHSFNNCS
Trigger: GGAACAGTTGTTGAAGGAATGTGTTACTACTGGGCGAAGTTCTCAAGGTGCAGTTGACCCATCTCTGTTCCCTTCACAGATTTTATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 90 bp CTGGTCCATAAGGATTTCCTCCAAGTCCCATCTTCATGGCTTGAGTaGGAGTTAAGTAGCACTTGTCTGTCAGTGGAGTATAAACCAGTT +
Preference number: 1 (lower is better)
Translates to: LVHKDFLQVPSSWLE*ELSSTCLSVEYKPV
Trigger: AACTGGTTTATACTCCACTGACAGACAAGTGCTACTTAACTCTCACTCAAGCCATGAAGATGGGACTTGGAGGAAATCCTTATGGACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR GCA 90 bp GGCCCAAATTTGGGCACAGCTCTCGATATCTTTAGAGATACTACTTaGCAGGGAGAAATTAGGCTCTTCCAGTCTAAAATGATGGCAATC +
Preference number: 1 (lower is better)
Translates to: GPNLGTALDIFRDTT*QGEIRLFQSKMMAI
Trigger: GATTGCCATCATTTTAGACTGGAAGAGCCTAATTTCTCCCTGGCAAGTAGTATCTCTAAAGATATCGAGAGCTGTGCCCAAATTTGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR GCA 90 bp CTGCTATTGGACCAACCCTCCATCCACAACACCTGGCATTTCTTATaGAAAGCTGGATTACTCTCACAGTTTATCATGAAGTTTGAATTT +
Preference number: 1 (lower is better)
Translates to: LLLDQPSIHNTWHFL*KAGLLSQFIMKFEF
Trigger: AAATTCAAACTTCATGATAAACTGTGAGAGTAATCCAGCTTTGCATAAGAAATGCCAGGTGTTGTGGATGGAGGGTTGGTCCAATAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CCA 90 bp ATTTTCTTCATACTGCTATTGGACCAACCCTCCATCCACAACACCTaGCATTTCTTATGCAAAGCTGGATTACTCTCACAGTTTATCATG +
Preference number: 1 (lower is better)
Translates to: IFFILLLDQPSIHNT*HFLCKAGLLSQFIM
Trigger: CATGATAAACTGTGAGAGTAATCCAGCTTTGCATAAGAAATGCCAGGTGTTGTGGATGGAGGGTTGGTCCAATAGCAGTATGAAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CCA 90 bp AAAGCCTTCCGAATAGAGAATAACTTCTGCAATAAGCTCATTGTCTaGATGAGACATAGCTACGGGCCTGAAAAGCTGTTTAAGATTATC +
Preference number: 1 (lower is better)
Translates to: KAFRIENNFCNKLIV*MRHSYGPEKLFKII
Trigger: GATAATCTTAAACAGCTTTTCAGGCCCGTAGCTATGTCTCATCCAGACAATGAGCTTATTGCAGAAGTTATTCTCTATTCGGAAGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 90 bp TTTTATCAGTGCATCAAACCGGGTGCAATCAGTAAACGTAAACTTTaGCATGGTATTAAGCCTCAGTGCTTGTACCACAATATGACTTTC +
Preference number: 1 (lower is better)
Translates to: FYQCIKPGAISKRKL*HGIKPQCLYHNMTF
Trigger: GAAAGTCATATTGTGGTACAAGCACTGAGGCTTAATACCATGTCAAAGTTTACGTTTACTGATTGCACCCGGTTTGATGCACTGATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 90 bp CCATCAGACCATTCTCTTGTGTCCATGTCAATATGGCCTAATAATTaGTATCGAGGCATAGCTTTGGGATTCATAGTATATTGTTTCACT +
Preference number: 1 (lower is better)
Translates to: PSDHSLVSMSIWPNN*YRGIALGFIVYCFT
Trigger: AGTGAAACAATATACTATGAATCCCAAAGCTATGCCTCGATATCAATTATTAGGCCATATTGACATGGACACAAGAGAATGGTCTGATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 90 bp ATTCTTCAAAGCATCTTGAATTGTCTGGATTTGCATAGAAACTGCTaGCAGTACAGATTCTTCCAGCCTATTAAATTCATCAAAACAACC +
Preference number: 1 (lower is better)
Translates to: ILQSILNCLDLHRNC*QYRFFQPIKFIKTT
Trigger: GGTTGTTTTGATGAATTTAATAGGCTGGAAGAATCTGTACTGTCAGCAGTTTCTATGCAAATCCAGACAATTCAAGATGCTTTGAAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 90 bp CCTGGCATTTCTTATGCAAAGCTGGATTACTCTCACAGTTTATCATaGAGTTTGAATTTGCAGAATCCATTATCAAGACAATATGCAAGT +
Preference number: 1 (lower is better)
Translates to: PGISYAKLDYSHSLS*SLNLQNPLSRQYAS
Trigger: ACTTGCATATTGTCTTGATAATGGATTCTGCAAATTCAAACTTCATGATAAACTGTGAGAGTAATCCAGCTTTGCATAAGAAATGCCAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CCA 90 bp TGTATGGACTTCTTCAAAGAAAGAACAAGCAGATCAAATAACTTCTaGATGAGATCATCAATCACAGTCTTCACAGGGTTGCAATTAATA +
Preference number: 1 (lower is better)
Translates to: CMDFFKERTSRSNNF*MRSSITVFTGLQLI
Trigger: TATTAATTGCAACCCTGTGAAGACTGTGATTGATGATCTCATCCAGAAGTTATTTGATCTGCTTGTTCTTTCTTTGAAGAAGTCCATACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CCA 90 bp AACTTACTATATTGTAGATTTGCATCACCAATTTCTTCCACAGACTaGGGCATAATTGTTAAGACTTCCATAGCCTCAGTAACAAATGTA +
Preference number: 1 (lower is better)
Translates to: NLLYCRFASPISSTD*GIIVKTSIASVTNV
Trigger: TACATTTGTTACTGAGGCTATGGAAGTCTTAACAATTATGCCCCAGTCTGTGGAAGAAATTGGTGATGCAAATCTACAATATAGTAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp GTCTTGGTTGCCCCCACATGGAACATCAATATTGGTAACCACACGATCCCTTTCGATCATGCGCTGAGATaGGCGAGCGATATTGGCAGG +
Preference number: 2 (lower is better)
Translates to: VLVAPTWNINIGNHTIPFDHALR*ASDIGR
Trigger: CCTGCCAATATCGCTCGCTCATCTCAGCGCATGATC...GAAAGGGATCGTGTGGTTACCAATATTGATGTTCCATGTGGGGGCAACCAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR GCA 90 bp GTCTTGGTTGCCCCCACATGGAACATCAATATTGGTAACCACACGATCCCTTTCTACCCAGTTCTGTATTaGAAGGGCACGGGCAACAAG +
Preference number: 2 (lower is better)
Translates to: VLVAPTWNINIGNHTIPFYPVLY*KGTGNK
Trigger: CTTGTTGCCCGTGCCCTTGCAATACAGAACTGGGTA...GAAAGGGATCGTGTGGTTACCAATATTGATGTTCCATGTGGGGGCAACCAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR TCA 90 bp ACTGCCCTTGCAGTTTCCTGGCGAAGAGCATTAAGAAATGTGTCTGGATGGAAAGAACTGATCATGCGCTaGGATGAGCGAGCGATATTG +
Preference number: 2 (lower is better)
Translates to: TALAVSWRRALRNVSGWKELIMR*DERAIL
Trigger: CAATATCGCTCGCTCATCTCAGCGCATGATCAGTTC...TTTCCATCCAGACACATTTCTTAATGCTCTTCGCCAGGAAACTGCAAGGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR TCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCAGGCTGCCCTTGCTCCTaGATTATGCCGAGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSGCPCS*IMPSSP
Trigger: TGGGGAGCTCGGCATAATTCAGGAGCAAGGGCAGCC...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp AGCTTTATCTACCCAGTTCTGTATTGCAAGGGCACGGGCAACAAGACCTCTCAGTGGAACCAGCTGTTATaGATCTGCCCAAAATCCTCA +
Preference number: 2 (lower is better)
Translates to: SFIYPVLYCKGTGNKTSQWNQLL*ICPKSS
Trigger: TGAGGATTTTGGGCAGATCCATAACAGCTGGTTCCA...CTGAGAGGTCTTGTTGCCCGTGCCCTTGCAATACAGAACTGGGTAGATAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR CAA 90 bp ACAAGACCTCTCAGGTATTGTAAGGGATCTTCTGGGCCTTCCCACTaGCTCTGCCATGCGAGAGGACACTTTTGGTTTAATAAAGCACTT +
Preference number: 2 (lower is better)
Translates to: TRPLRYCKGSSGPSH*LCHARGHFWFNKAL
Trigger: AAGTGCTTTATTAAACCAAAAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATCCCTTACAATACCTGAGAGGTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR TCA 90 bp AACAGGCAAAGAGATGCACTCATCCGGAGAATATGGACCACATGCATCCTGTGGGTTTCTTCCAGAGATTaGGGACAGGAGAAAGTTCAT +
Preference number: 2 (lower is better)
Translates to: NRQRDALIRRIWTTCILWVSSRD*GQEKVH
Trigger: ATGAACTTTCTCCTGTCCTCAATCTCTGGAAGAAAC...CCACAGGATGCATGTGGTCCATATTCTCCGGATGAGTGCATCTCTTTGCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR TCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAGTGAGACTGAATCACTaGTGGGTTGGTAGACTGGCC +
Preference number: 2 (lower is better)
Translates to: SSRSKTTCCASIPASCSTVRLNH*WVGRLA
Trigger: GGCCAGTCTACCAACCCATCAGTGATTCAGTCTCAC...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAAGTGGACCGGAGTTGTaGAAATGCGTACCTGAGCAG +
Preference number: 2 (lower is better)
Translates to: SSRSKTTCCASIPASCSTSGPEL*KCVPEQ
Trigger: CTGCTCAGGTACGCATTTTCACAACTCCGGTCCACT...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp GAGGCTACAAATTTAAGGCTATCCACAGAACGACCCACTGCCCTTGCAGTTTCCAGAGCAGCAAGAGACTaGTGGACACTTTGTACTAAA +
Preference number: 2 (lower is better)
Translates to: EATNLRLSTERPTALAVSRAARD*WTLCTK
Trigger: TTTAGTACAAAGTGTCCACCAGTCTCTTGCTGCTCT...GGAAACTGCAAGGGCAGTGGGTCGTTCTGTGGATAGCCTTAAATTTGTAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR GCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAGTCTGGCTCAGTTTCTaGAGGAGATGTCGAGAAGTG +
Preference number: 2 (lower is better)
Translates to: SSRSKTTCCASIPASCSTVWLSF*RRCREV
Trigger: CACTTCTCGACATCTCCTGCAGAAACTGAGCCAGAC...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp CACTGCCCTTGCAGTTTCCTGGCGAAGAGCATTAAGAAATGTGTCTGGATGGAAGCGAGAGGACACTTTTaGTTTAATAAAGCACTTGCC +
Preference number: 2 (lower is better)
Translates to: HCPCSFLAKSIKKCVWMEARGHF*FNKALA
Trigger: GGCAAGTGCTTTATTAAACCAAAAGTGTCCTCTCGC...TTCCATCCAGACACATTTCTTAATGCTCTTCGCCAGGAAACTGCAAGGGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR TCA 90 bp AGCTTTATCTACCCAGTTCTGTATTGCAAGGGCACGGGCAACAAGACCTCTCAGCAAAATCCTCAACTGTaGAATAACCTGAGAACTGAT +
Preference number: 2 (lower is better)
Translates to: SFIYPVLYCKGTGNKTSQQNPQL*NNLRTD
Trigger: ATCAGTTCTCAGGTTATTTCACAGTTGAGGATTTTG...CTGAGAGGTCTTGTTGCCCGTGCCCTTGCAATACAGAACTGGGTAGATAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR TCA 90 bp GAGGCTACAAATTTAAGGCTATCCACAGAACGACCCACTGCCCTTGCAGTTTCCTTCAAGAATGATGAATaGCAGTATTGGAGATCCTTG +
Preference number: 2 (lower is better)
Translates to: EATNLRLSTERPTALAVSFKNDE*QYWRSL
Trigger: CAAGGATCTCCAATACTGTCATTCATCATTCTTGAA...GGAAACTGCAAGGGCAGTGGGTCGTTCTGTGGATAGCCTTAAATTTGTAGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR TCA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTAATCAAACCGAAAAGTaGTCCAGTCTTCATTGGCCA +
Preference number: 2 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFNQTEK*SSLHWP
Trigger: TGGCCAATGAAGACTGGATCACTTTTCGGTTTGATT...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTAGGGTCAACTGCACCTTaGGAACTTCGCCCAGTAGTA +
Preference number: 2 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALGSTAP*ELRPVV
Trigger: TACTACTGGGCGAAGTTCTCAAGGTGCAGTTGACCC...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAAGCTCATTGTCTGGATaGGACATAGCTACGGGCCTG +
Preference number: 2 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRSSLSG*DIATGL
Trigger: CAGGCCCGTAGCTATGTCTCATCCAGACAATGAGCT...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR GCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGACAGAGATGGGTCAACTaGACCTTGAGAACTTCGCCC +
Preference number: 2 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRQRWVN*TLRTSP
Trigger: GGGCGAAGTTCTCAAGGTGCAGTTGACCCATCTCTG...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp GATCTTCTGGGCCTTCCCACTTGCTCTGCCATGCGAGAGGACACTTTTGGTTTATTTCTCTATCAAATTTaGAACCAGCTGTTATGGATC +
Preference number: 2 (lower is better)
Translates to: DLLGLPTCSAMREDTFGLFLYQI*NQLLWI
Trigger: GATCCATAACAGCTGGTTCCAAATTTGATAGAGAAA...TAAACCAAAAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR CCA 90 bp TGGCCTCTTCAAAGACCTGCTTTAATGCAGCACTTAGTTCATCATATTCCACTTCTCCACGGCCGAAAATaGGTTCCAAATACACCCACT +
Preference number: 2 (lower is better)
Translates to: WPLQRPALMQHLVHHIPLLHGRK*VPNTPT
Trigger: AGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAG...AAGTGGAATATGATGAACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAGCGTGTCTGTTCTTTTaGCAATGCTCCACGGCCGAA +
Preference number: 2 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRACLFF*QCSTAE
Trigger: TTCGGCCGTGGAGCATTGCCAAAAGAACAGACACGC...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACATCCTCTGGAAATCTTTaGAGAAAACAGGACCGCTCC +
Preference number: 2 (lower is better)
Translates to: SSRSKTTCCASIPASCSTSSGNL*RKQDRS
Trigger: GGAGCGGTCCTGTTTTCTCCAAAGATTTCCAGAGGA...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CAA 90 bp CCGAAAAGTGATCCAGTCTTCATTGGCCATTTCCTGAAATCCTTGTaGAAACTCTTCATAAAAGGCCCAAATTTGGGCACAGCTCTCGAT +
Preference number: 2 (lower is better)
Translates to: PKSDPVFIGHFLKSL*KLFIKGPNLGTALD
Trigger: ATCGAGAGCTGTGCCCAAATTTGGGCCTTTTATGAAGAGTTTCAACAAGGATTTCAGGAAATGGCCAATGAAGACTGGATCACTTTTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTAACATTTGGGCCAAACTaGATCCTTTCTCCACTGGGC +
Preference number: 2 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALTFGPN*ILSPLG
Trigger: GCCCAGTGGAGAAAGGATTCAGTTTGGCCCAAATGT...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR GCA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTTTTAGAGATACTACTTaGCAGGGAGAAATTAGGCTC +
Preference number: 2 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFFRDTT*QGEIRL
Trigger: GAGCCTAATTTCTCCCTGGCAAGTAGTATCTCTAAA...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR GCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACATCGAGAAGTGGTTTGTaGACTACAGTGAACTGTAGC +
Preference number: 2 (lower is better)
Translates to: SSRSKTTCCASIPASCSTSRSGL*TTVNCS
Trigger: GCTACAGTTCACTGTAGTGCACAAACCACTTCTCGA...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTTCACCAGGCTTTAGTTaGTCCCAACGAGCTTTAAAT +
Preference number: 2 (lower is better)
Translates to: VTSPCARLFKSLRSAALASPGFS*SQRALN
Trigger: ATTTAAAGCTCGTTGGGACCAACTAAAGCCTGGTGA...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAGTCAAGCCAGTGATCTaGAGAAAGATGCTCCCCTCT +
Preference number: 2 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRVKPVI*RKMLPS
Trigger: AGAGGGGAGCATCTTTCTCCAGATCACTGGCTTGAC...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CAA 90 bp AAACCGAAAAGTGATCCAGTCTTCATTGGCCATTTCCTGAAATCCTaGTTGAAACTCTTCATAAAAGGCCCAAATTTGGGCACAGCTCTC +
Preference number: 2 (lower is better)
Translates to: KPKSDPVFIGHFLKS*LKLFIKGPNLGTAL
Trigger: GAGAGCTGTGCCCAAATTTGGGCCTTTTATGAAGAGTTTCAACAAGGATTTCAGGAAATGGCCAATGAAGACTGGATCACTTTTCGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACATCTTCCAGTCTAAAATaGTGGCAATCATCAACCAGC +
Preference number: 2 (lower is better)
Translates to: SSRSKTTCCASIPASCSTSSSLK*WQSSTS
Trigger: GCTGGTTGATGATTGCCATCATTTTAGACTGGAAGA...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCAAAAAGGTCAAGCCAGTaGTCTGGAGAAAGATGCTCC +
Preference number: 2 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSKRSSQ*SGERCS
Trigger: GGAGCATCTTTCTCCAGATCACTGGCTTGACCTTTT...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGACATTCTCCAAAGCGTTaGTTTTCCAGCACCACTTGG +
Preference number: 2 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRHSPKR*FSSTTW
Trigger: CCAAGTGGTGCTGGAAAATCAACGCTTTGGAGAATG...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAATCACAGATTATCCATaGGCTGACATCTTGAGGTTC +
Preference number: 2 (lower is better)
Translates to: SSRSKTTCCASIPASCSTITDYP*ADILRF
Trigger: GAACCTCAAGATGTCAGCTCATGGATAATCTGTGAT...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCATGTCAGGAGTCTGAATaGCTGGAAGAGTTAAGCCGT +
Preference number: 2 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSCQESE*LEELSR
Trigger: ACGGCTTAACTCTTCCAGTCATTCAGACTCCTGACA...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR GCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTCTGTTCTTTTGGCAATaGTCCACGGCCGAAAATGGG +
Preference number: 2 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLILFFWQ*STAENG
Trigger: CCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACAG...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp AGTTCTGATAGGTCAAGTGTTTCAGAGAGAAGAGCCTGTTTTTCAGCTTTATCTATGAGCGAGCGATATTaGCAGGCAGACCAAAGAAAC +
Preference number: 2 (lower is better)
Translates to: SSDRSSVSERRACFSALSMSERY*QADQRN
Trigger: GTTTCTTTGGTCTGCCTGCCAATATCGCTCGCTCAT...AGATAAAGCTGAAAAACAGGCTCTTCTCTCTGAAACACTTGACCTATCAGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR CCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAAATAAGCTCATTGTCTaGATGAGACATAGCTACGGG +
Preference number: 2 (lower is better)
Translates to: SSRSKTTCCASIPASCSTNKLIV*MRHSYG
Trigger: CCCGTAGCTATGTCTCATCCAGACAATGAGCTTATT...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAAAGCCAAGAACCCATTaGGTAAGAATGCAAGGAGTA +
Preference number: 2 (lower is better)
Translates to: SSRSKTTCCASIPASCSTKPRTH*VRMQGV
Trigger: TACTCCTTGCATTCTTACCCAATGGGTTCTTGGCTT...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CAA 90 bp CATTTCCTGAAATCCTTGTTGAAACTCTTCATAAAAGGCCCAAATTaGGGCACAGCTCTCGATATCTTTAGAGATACTACTTGCCAGGGA +
Preference number: 2 (lower is better)
Translates to: HFLKSLLKLFIKGPN*GTALDIFRDTTCQG
Trigger: TCCCTGGCAAGTAGTATCTCTAAAGATATCGAGAGCTGTGCCCAAATTTGGGCCTTTTATGAAGAGTTTCAACAAGGATTTCAGGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp ACATGGAACATCAATATTGGTAACCACACGATCCCTTTCAGCACTTGTGTAAACGGAGGAGGCACTTTCTaGTGTATTAGGTTTGAATTC +
Preference number: 2 (lower is better)
Translates to: TWNINIGNHTIPFSTCVNGGGTF*CIRFEF
Trigger: GAATTCAAACCTAATACATCAGAAAGTGCCTCCTCC...GTTTACACAAGTGCTGAAAGGGATCGTGTGGTTACCAATATTGATGTTCCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR TCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACATTTCACTGTCATCACTaGATGTTCTTCAACCTTCCT +
Preference number: 2 (lower is better)
Translates to: SSRSKTTCCASIPASCSTFHCHH*MFFNLP
Trigger: AGGAAGGTTGAAGAACATTCAGTGATGACAGTGAAA...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp TGGCCTCTTCAAAGACCTGCTTTAATGCAGCACTTAGTTCATCATATTCCACTTTCTTCATGGCTTGAGTaGGAGTTAAGTAGCACTTGT +
Preference number: 2 (lower is better)
Translates to: WPLQRPALMQHLVHHIPLSSWLE*ELSSTC
Trigger: ACAAGTGCTACTTAACTCTCACTCAAGCCATGAAGA...AAGTGGAATATGATGAACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR GCA 90 bp AGTTCTGATAGGTCAAGTGTTTCAGAGAGAAGAGCCTGTTTTTCAGCTTTATCTCAGCTGTTATGGATCTaGCCAAAATCCTCAACTGTG +
Preference number: 2 (lower is better)
Translates to: SSDRSSVSERRACFSALSQLLWI*PKSSTV
Trigger: CACAGTTGAGGATTTTGGGCAGATCCATAACAGCTG...AGATAAAGCTGAAAAACAGGCTCTTCTCTCTGAAACACTTGACCTATCAGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR CCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACATCTTTCACAGTCTTTTaGTCTGTATACACGACCAGT +
Preference number: 2 (lower is better)
Translates to: SSRSKTTCCASIPASCSTSFTVF*SVYTTS
Trigger: ACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGA...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CAA 90 bp TTGAGGACAGGAGAAAGTTCATTAGACCAGATTTCTCTATCAAATTaGGAACCAGCTGTTATGGATCTGCCCAAAATCCTCAACTGTGAA +
Preference number: 2 (lower is better)
Translates to: LRTGESSLDQISLSN*EPAVMDLPKILNCE
Trigger: TTCACAGTTGAGGATTTTGGGCAGATCCATAACAGCTGGTTCCAAATTTGATAGAGAAATCTGGTCTAATGAACTTTCTCCTGTCCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR CAA 90 bp AATTTTTGTACTTCTGAACTCAGTAAAGTAGTTCCTCTGATGACTTaGCTGAGAGCAGCAAGAGACTGGTGGACACTTTGTACTAAACGA +
Preference number: 2 (lower is better)
Translates to: NFCTSELSKVVPLMT*LRAARDWWTLCTKR
Trigger: TCGTTTAGTACAAAGTGTCCACCAGTCTCTTGCTGCTCTCAGCAAAGTCATCAGAGGAACTACTTTACTGAGTTCAGAAGTACAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR CAA 90 bp TATCGAGGCATAGCTTTGGGATTCATAGTATATTGTTTCACTACTTaGCCAGTTTTACAAAGCGCAGCCCTTAACATTCTCCAAAGCGTT +
Preference number: 2 (lower is better)
Translates to: YRGIALGFIVYCFTT*PVLQSAALNILQSV
Trigger: AACGCTTTGGAGAATGTTAAGGGCTGCGCTTTGTAAAACTGGCAAAGTAGTGAAACAATATACTATGAATCCCAAAGCTATGCCTCGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCATTGCATAGAAACTGCTaGCAGTACAGATTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSLHRNC*QYRFFQ
Trigger: CTGGAAGAATCTGTACTGTCAGCAGTTTCTATGCAA...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCAGAGCCCCAATCTCCTTaGAACACTGATGTTAAAATG +
Preference number: 2 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSEPQSP*NTDVKM
Trigger: CATTTTAACATCAGTGTTTCAAGGAGATTGGGGCTC...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR GCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCATTACTTCTACCTCCTTaGCAAGCAGTTCACATACAG +
Preference number: 2 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSLLLPP*QAVHIQ
Trigger: CTGTATGTGAACTGCTTGGCAAGGAGGTAGAAGTAA...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR GCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAGACATCTTTTATCAGTaGATCAAACCGGGTGCAATC +
Preference number: 2 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRDIFYQ*IKPGAI
Trigger: GATTGCACCCGGTTTGATGCACTGATAAAAGATGTC...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR GCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTAGCCTCTTCAAAGACCTaGTTTAATGCAGCACTTAGT +
Preference number: 2 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALASSKT*FNAALS
Trigger: ACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGC...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTACGATTCAGTATTCCCTaGATCCTCAGAACTTGTATC +
Preference number: 2 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALRFSIP*ILRTCI
Trigger: GATACAAGTTCTGAGGATCCAGGGAATACTGAATCG...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTAGCACTTGTCTGTCAGTaGAGTATAAACCAGTTTGGA +
Preference number: 2 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALALVCQ*SINQFG
Trigger: TCCAAACTGGTTTATACTCCACTGACAGACAAGTGC...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CAA 90 bp AACCATGTAGATGTGACAAACCATTCATCACAGTCCCAACCAAACTaGTTTCTACCACATAGTCATTCTGCTTTAGAACCCATTGTAAAG +
Preference number: 2 (lower is better)
Translates to: NHVDVTNHSSQSQPN*FLPHSHSALEPIVK
Trigger: CTTTACAATGGGTTCTAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATGGTTTGTCACATCTACATGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp GACAGGAGAAAGTTCATTAGACCAGATTTCTCTATCAAATTTGGAACCAGCTGTCAATGTTCCCTTTTGTaGAGATGGCTTTTGTTGTCA +
Preference number: 2 (lower is better)
Translates to: DRRKFIRPDFSIKFGTSCQCSLL*RWLLLS
Trigger: TGACAACAAAAGCCATCTTCACAAAAGGGAACATTG...ACAGCTGGTTCCAAATTTGATAGAGAAATCTGGTCTAATGAACTTTCTCCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR TCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGATTAAACAATCTACCTTaGCAGCACTTGGAAGTCGTT +
Preference number: 2 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRLNNLP*QHLEVV
Trigger: AACGACTTCCAAGTGCTGTCAAGGTAGATTGTTTAA...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp TGGCCTCTTCAAAGACCTGCTTTAATGCAGCACTTAGTTCATCATATTCCACTTTCAATTTCATGTAAATaGGCCTGTATGGACTTCTTC +
Preference number: 2 (lower is better)
Translates to: WPLQRPALMQHLVHHIPLSISCK*ACMDFF
Trigger: GAAGAAGTCCATACAGGCTCATTTACATGAAATTGA...AAGTGGAATATGATGAACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTACTATATTCAGCAGGCTaGTTCCTCAACCAAGATTTT +
Preference number: 2 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALLYSAG*FLNQDF
Trigger: AAAATCTTGGTTGAGGAATCAGCCTGCTGAATATAG...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTGAGTTAAGCCGTTACTaGAATCATCAGCAGTCAAGT +
Preference number: 2 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIELSRY*NHQQSS
Trigger: ACTTGACTGCTGATGATTTCAGTAACGGCTTAACTC...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR GCA 90 bp TGGCCTCTTCAAAGACCTGCTTTAATGCAGCACTTAGTTCATCATATTCCACTTTCAGTGAATTTAATCTaGTCCGCCAAGCATAAAATC +
Preference number: 2 (lower is better)
Translates to: WPLQRPALMQHLVHHIPLSVNLI*SAKHKI
Trigger: GATTTTATGCTTGGCGGAGCAGATTAAATTCACTGA...AAGTGGAATATGATGAACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR GCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCAGGTATTAAGCCTCAGTaGTTGTACCACAATATGACT +
Preference number: 2 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSGIKPQ*LYHNMT
Trigger: AGTCATATTGTGGTACAAGCACTGAGGCTTAATACC...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAGAGTATAAACCAGTTTaGAAGCATTACCCTGATATT +
Preference number: 2 (lower is better)
Translates to: SSRSKTTCCASIPASCSTEYKPV*KHYPDI
Trigger: AATATCAGGGTAATGCTTCCAAACTGGTTTATACTC...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR TCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCACAAATAACTTCTGGATaGGATCATCAATCACAGTCT +
Preference number: 2 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSQITSG*DHQSQS
Trigger: AGACTGTGATTGATGATCTCATCCAGAAGTTATTTG...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR GCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCAATTGTTTCACTACTTTaGCAGTTTTACAAAGCGCAG +
Preference number: 2 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSIVSLL*QFYKAQ
Trigger: CTGCGCTTTGTAAAACTGGCAAAGTAGTGAAACAAT...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTTACCTTGACAGCACTTaGAAGTCGTTCTACTTCTTT +
Preference number: 2 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIYLDST*KSFYFF
Trigger: AAAGAAGTAGAACGACTTCCAAGTGCTGTCAAGGTA...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTAGCAGTCAAGTCTTCTaGCTTCTTAAGCACATATGT +
Preference number: 2 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLISSQVF*LLKHIC
Trigger: ACATATGTGCTTAAGAAGCCAGAAGACTTGACTGCT...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCAGAATCCTTTAAGGATTaGAGAAGGCATCTATTATCT +
Preference number: 2 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSESFKD*RRHLLS
Trigger: AGATAATAGATGCCTTCTCCAATCCTTAAAGGATTC...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTGTAAATGAGCCTGTATaGACTTCTTCAAAGAAAGAA +
Preference number: 2 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIVNEPV*TSSKKE
Trigger: TTCTTTCTTTGAAGAAGTCCATACAGGCTCATTTAC...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp AACAGGCAAAGAGATGCACTCATCCGGAGAATATGGACCACATGCATCCTGTGGTCTGGGCCTTCCCACTaGCTCTGCCATGCGAGAGGA +
Preference number: 3 (lower is better)
Translates to: NRQRDALIRRIWTTCILWSGPSH*LCHARG
Trigger: TCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGA...CCACAGGATGCATGTGGTCCATATTCTCCGGATGAGTGCATCTCTTTGCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR CAA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAGTCCTGGGGCTGCCCTaGCTCCTGAATTATGCCGAG +
Preference number: 3 (lower is better)
Translates to: SSRSKTTCCASIPASCSTVLGLP*LLNYAE
Trigger: CTCGGCATAATTCAGGAGCAAGGGCAGCCCCAGGAC...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp CTCAGTAAAGTAGTTCCTCTGATGACTTTGCTGAGAGCAGCAAGAGACTGGTGGCAGTATTGGAGATCCTaGTCGATCGTTAGGAGGAGG +
Preference number: 3 (lower is better)
Translates to: LSKVVPLMTLLRAARDWWQYWRS*SIVRRR
Trigger: CCTCCTCCTAACGATCGACAAGGATCTCCAATACTG...CCACCAGTCTCTTGCTGCTCTCAGCAAAGTCATCAGAGGAACTACTTTACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR CAA 90 bp CACTTGTGTAAACAGGCAAAGAGATGCACTCATCCGGAGAATATGGACCACATGCTACCCAGTTCTGTATaGCAAGGGCACGGGCAACAA +
Preference number: 3 (lower is better)
Translates to: HLCKQAKRCTHPENMDHMLPSSV*QGHGQQ
Trigger: TTGTTGCCCGTGCCCTTGCAATACAGAACTGGGTAG...CATGTGGTCCATATTCTCCGGATGAGTGCATCTCTTTGCCTGTTTACACAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR TCA 72 bp ACAGTGAACTGTAGCAATTTGAGTGGACCGGAGTTGTaGAAATGCGTACCTGAGCAGCATCCCTTTGCCACA +
Preference number: 3 (lower is better)
Translates to: TVNCSNLSGPEL*KCVPEQHPFAT
Trigger: TGTGGCAAAGGGATGCTGCTCAGGTACGCATTTTCACAACTCCGGTCCACTCAAATTGCTACAGTTCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR GCA 72 bp GCTCAGTTTCTGCAGGAGATGTCGAGAAGTGGTTTGTaGACTACAGTGAACTGTAGCAATTTGAGTGGACCG +
Preference number: 3 (lower is better)
Translates to: AQFLQEMSRSGL*TTVNCSNLSGP
Trigger: CGGTCCACTCAAATTGCTACAGTTCACTGTAGTGCACAAACCACTTCTCGACATCTCCTGCAGAAACTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CCA 72 bp TCCACACTGAATCCACTGGTCTTGGTTGCCCCCACATaGAACATCAATATTGGTAACCACACGATCCCTTTC +
Preference number: 3 (lower is better)
Translates to: STLNPLVLVAPT*NINIGNHTIPF
Trigger: GAAAGGGATCGTGTGGTTACCAATATTGATGTTCCATGTGGGGGCAACCAAGACCAGTGGATTCAGTGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR CAA 90 bp AAATTTAAGGCTATCCACAGAACGACCCACTGCCCTTGCAGTTTCCTGGCGAAGCCAAAGAAACTAGGTTaGTCGTCCTCTGGAATTTTC +
Preference number: 3 (lower is better)
Translates to: KFKAIHRTTHCPCSFLAKPKKLG*SSSGIF
Trigger: GAAAATTCCAGAGGACGACAAACCTAGTTTCTTTGG...CTTCGCCAGGAAACTGCAAGGGCAGTGGGTCGTTCTGTGGATAGCCTTAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR CAA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACATGGGTCAACTGCACCTaGAGAACTTCGCCCAGTAGT +
Preference number: 3 (lower is better)
Translates to: SSRSKTTCCASIPASCSTWVNCT*RTSPSS
Trigger: ACTACTGGGCGAAGTTCTCAAGGTGCAGTTGACCCA...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 72 bp CTAGGAAGTCCAAGGAGACGAAAAAGGTCAAGCCAGTaGTCTGGAGAAAGATGCTCCCCTCTCACATATTTC +
Preference number: 3 (lower is better)
Translates to: LGSPRRRKRSSQ*SGERCSPLTYF
Trigger: GAAATATGTGAGAGGGGAGCATCTTTCTCCAGATCACTGGCTTGACCTTTTTCGTCTCCTTGGACTTCCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 72 bp ATCTGTGAAGGGAACAGAGATGGGTCAACTGCACCTTaGGAACTTCGCCCAGTAGTAACACATTCCTTCAAC +
Preference number: 3 (lower is better)
Translates to: ICEGNRDGSTAP*ELRPVVTHSFN
Trigger: GTTGAAGGAATGTGTTACTACTGGGCGAAGTTCTCAAGGTGCAGTTGACCCATCTCTGTTCCCTTCACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 72 bp GAAATCTTTGGAGAAAACAGGACCGCTCCATGCATGTaGCTGACTAAAGAAGTGATGGTCCGACGACCTACA +
Preference number: 3 (lower is better)
Translates to: EIFGENRTAPCM*LTKEVMVRRPT
Trigger: TGTAGGTCGTCGGACCATCACTTCTTTAGTCAGTCACATGCATGGAGCGGTCCTGTTTTCTCCAAAGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR GCA 72 bp TCAGGTATTGTAAGGGATCTTCTGGGCCTTCCCACTTaGTCTGCCATGCGAGAGGACACTTTTGGTTTAATA +
Preference number: 3 (lower is better)
Translates to: SGIVRDLLGLPT*SAMREDTFGLI
Trigger: TATTAAACCAAAAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATCCCTTACAATACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR GCA 72 bp GATCCCTTTCAGCACTTGTGTAAACAGGCAAAGAGATaGACTCATCCGGAGAATATGGACCACATGCATCCT +
Preference number: 3 (lower is better)
Translates to: DPFQHLCKQAKR*THPENMDHMHP
Trigger: AGGATGCATGTGGTCCATATTCTCCGGATGAGTGCATCTCTTTGCCTGTTTACACAAGTGCTGAAAGGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR CCA 72 bp GTAAACAGGCAAAGAGATGCACTCATCCGGAGAATATaGACCACATGCATCCTGTGGAATCCAGCCCATAAA +
Preference number: 3 (lower is better)
Translates to: VNRQRDALIRRI*TTCILWNPAHK
Trigger: TTTATGGGCTGGATTCCACAGGATGCATGTGGTCCATATTCTCCGGATGAGTGCATCTCTTTGCCTGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR GCA 72 bp TATTGTAAGGGATCTTCTGGGCCTTCCCACTTGCTCTaGCATGCGAGAGGACACTTTTGGTTTAATAAAGCA +
Preference number: 3 (lower is better)
Translates to: YCKGSSGPSHLL*HARGHFWFNKA
Trigger: TGCTTTATTAAACCAAAAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATCCCTTACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR GCA 72 bp TTAGTACTGATTACCATGCAAGTCTGGCTCAGTTTCTaGAGGAGATGTCGAGAAGTGGTTTGTGCACTACAG +
Preference number: 3 (lower is better)
Translates to: LVLITMQVWLSF*RRCREVVCALQ
Trigger: CTGTAGTGCACAAACCACTTCTCGACATCTCCTGCAGAAACTGAGCCAGACTTGCATGGTAATCAGTACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CCA 72 bp ACACGACCAGTATTAGTACTGATTACCATGCAAGTCTaGCTCAGTTTCTGCAGGAGATGTCGAGAAGTGGTT +
Preference number: 3 (lower is better)
Translates to: TRPVLVLITMQV*LSFCRRCREVV
Trigger: AACCACTTCTCGACATCTCCTGCAGAAACTGAGCCAGACTTGCATGGTAATCAGTACTAATACTGGTCGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CCA 72 bp ATACTGCTATTGGACCAACCCTCCATCCACAACACCTaGCATTTCTTATGCAAAGCTGGATTACTCTCACAG +
Preference number: 3 (lower is better)
Translates to: ILLLDQPSIHNT*HFLCKAGLLSQ
Trigger: CTGTGAGAGTAATCCAGCTTTGCATAAGAAATGCCAGGTGTTGTGGATGGAGGGTTGGTCCAATAGCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAAGGTTCCCGAACCACTaGACGAGCACTATTTGTCAA +
Preference number: 3 (lower is better)
Translates to: SSRSKTTCCASIPASCSTRFPNH*TSTICQ
Trigger: TTGACAAATAGTGCTCGTCAAGTGGTTCGGGAACCT...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR GCA 72 bp GACCAACCCTCCATCCACAACACCTGGCATTTCTTATaGAAAGCTGGATTACTCTCACAGTTTATCATGAAG +
Preference number: 3 (lower is better)
Translates to: DQPSIHNTWHFL*KAGLLSQFIMK
Trigger: CTTCATGATAAACTGTGAGAGTAATCCAGCTTTGCATAAGAAATGCCAGGTGTTGTGGATGGAGGGTTGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CCA 72 bp AAGTCCAAGGAGACGAAAAAGGTCAAGCCAGTGATCTaGAGAAAGATGCTCCCCTCTCACATATTTCAAGAT +
Preference number: 3 (lower is better)
Translates to: KSKETKKVKPVI*RKMLPSHIFQD
Trigger: ATCTTGAAATATGTGAGAGGGGAGCATCTTTCTCCAGATCACTGGCTTGACCTTTTTCGTCTCCTTGGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CCA 72 bp GTGTCTGTTCTTTTGGCAATGCTCCACGGCCGAAAATaGGTTCCAAATACACCCACTTTCTCTGAATATGAT +
Preference number: 3 (lower is better)
Translates to: VSVLLAMLHGRK*VPNTPTFSEYD
Trigger: ATCATATTCAGAGAAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CCA 72 bp TTTGAACTGCTTCAGTTCATATCCTCTGGAAATCTTTaGAGAAAACAGGACCGCTCCATGCATGTGACTGAC +
Preference number: 3 (lower is better)
Translates to: FELLQFISSGNL*RKQDRSMHVTD
Trigger: GTCAGTCACATGCATGGAGCGGTCCTGTTTTCTCCAAAGATTTCCAGAGGATATGAACTGAAGCAGTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp TCAAATTTGGAACCAGCTGTTATGGATCTGCCCAAAATCCTCAACTGTGAAATAGATGAGCGAGCGATATaGGCAGGCAGACCAAAGAAA +
Preference number: 3 (lower is better)
Translates to: SNLEPAVMDLPKILNCEIDERAI*AGRPKK
Trigger: TTTCTTTGGTCTGCCTGCCAATATCGCTCGCTCATC...TATTTCACAGTTGAGGATTTTGGGCAGATCCATAACAGCTGGTTCCAAATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR TCA 72 bp CCCACACTTCACCAAACCAACAAATATTCGTCCCATTaGCTTCACATCGATGCCCTCATCACAATTAAAGAC +
Preference number: 3 (lower is better)
Translates to: PTLHQTNKYSSH*LHIDALITIKD
Trigger: GTCTTTAATTGTGATGAGGGCATCGATGTGAAGTCAATGGGACGAATATTTGTTGGTTTGGTGAAGTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACATCATCAACTGTAAATTaGGCTCGCACCTGTTCATAC +
Preference number: 3 (lower is better)
Translates to: SSRSKTTCCASIPASCSTSSTVN*ARTCSY
Trigger: GTATGAACAGGTGCGAGCCAAATTTACAGTTGATGA...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 72 bp TGCATCAAACCGGGTGCAATCAGTAAACGTAAACTTTaGCATGGTATTAAGCCTCAGTGCTTGTACCACAAT +
Preference number: 3 (lower is better)
Translates to: CIKPGAISKRKL*HGIKPQCLYHN
Trigger: ATTGTGGTACAAGCACTGAGGCTTAATACCATGTCAAAGTTTACGTTTACTGATTGCACCCGGTTTGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR GCA 72 bp ATCCATAGGTTTGTGAAAGTCTGGAGGAGATTCTCGTaGCCAATGAAAAACCTCTTTGGTAAATTCCAAACG +
Preference number: 3 (lower is better)
Translates to: IHRFVKVWRRFS*PMKNLFGKFQT
Trigger: CGTTTGGAATTTACCAAAGAGGTTTTTCATTGGGCACGAGAATCTCCTCCAGACTTTCACAAACCTATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp TGGCCTCTTCAAAGACCTGCTTTAATGCAGCACTTAGTTCATCATATTCCACTTAAGCCCAGTCTTCAGTaGTATGAACCTGAATTTGGT +
Preference number: 3 (lower is better)
Translates to: WPLQRPALMQHLVHHIPLKPSLQ*YEPEFG
Trigger: ACCAAATTCAGGTTCATACAACTGAAGACTGGGCTT...AAGTGGAATATGATGAACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTACAAATATTCGTCCCATaGACTTCACATCGATGCCCT +
Preference number: 3 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALQIFVP*TSHRCP
Trigger: AGGGCATCGATGTGAAGTCAATGGGACGAATATTTG...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp TTTTGTACTTCTGAACTCAGTAAAGTAGTTCCTCTGATGACTTTGCTGAGAGCAAGTTTCTTCCAGAGATaGAGGACAGGAGAAAGTTCA +
Preference number: 3 (lower is better)
Translates to: FCTSELSKVVPLMTLLRASFFQR*RTGESS
Trigger: TGAACTTTCTCCTGTCCTCAATCTCTGGAAGAAACT...TGCTCTCAGCAAAGTCATCAGAGGAACTACTTTACTGAGTTCAGAAGTACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR CAA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTATAAAAGGCCCAAATTaGGGCACAGCTCTCGATATC +
Preference number: 3 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIIKGPN*GTALDI
Trigger: GATATCGAGAGCTGTGCCCAAATTTGGGCCTTTTAT...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTTTAAGGTCGGCAGCTTaGGCTACAATTGTATCAGCT +
Preference number: 3 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLILRSAA*ATIVSA
Trigger: AGCTGATACAATTGTAGCCAAAGCTGCCGACCTTAA...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAACCCCAATCATAATGTaGCTGAGGTGTCAAAAGTTC +
Preference number: 3 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRTPIIM*LRCQKF
Trigger: GAACTTTTGACACCTCAGCAACATTATGATTGGGGT...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCACAGTCCCAACCAAACTaGTTTCTACCACATAGTCAT +
Preference number: 3 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSQSQPN*FLPHSH
Trigger: ATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTG...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCATTTGCACCAACAATTTaGTCACGAAATAAGCGCCGT +
Preference number: 3 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSFAPTI*SRNKRR
Trigger: ACGGCGCTTATTTCGTGACAAAATTGTTGGTGCAAA...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAAAACTATCTGACATATaGTCTAATATGTCTGAGCCC +
Preference number: 3 (lower is better)
Translates to: SSRSKTTCCASIPASCSTKLSDI*SNMSEP
Trigger: GGGCTCAGACATATTAGACAATATGTCAGATAGTTT...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 72 bp CCCAGTCTTCCTCCAGCTGACATAGAAGCCACAATTTaGATATTTTCTAGACCAACCCATTCCAAATTTTCA +
Preference number: 3 (lower is better)
Translates to: PSLPPADIEATI*IFSRPTHSKFS
Trigger: TGAAAATTTGGAATGGGTTGGTCTAGAAAATATTCAAATTGTGGCTTCTATGTCAGCTGGAGGAAGACTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR GCA 72 bp AACAAGCCACTGATCTTAATTTGTAGCTTTGCTTCTTaGAGTCGACCTTTCCATGAGGCTACAAATTTAAGG +
Preference number: 3 (lower is better)
Translates to: NKPLILICSFAS*SRPFHEATNLR
Trigger: CCTTAAATTTGTAGCCTCATGGAAAGGTCGACTGCAAGAAGCAAAGCTACAAATTAAGATCAGTGGCTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR-3UTR CAA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTATTTAAACAATCTACCTaGACAGCACTTGGAAGTCGT +
Preference number: 3 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALFKQST*TALGSR
Trigger: ACGACTTCCAAGTGCTGTCAAGGTAGATTGTTTAAA...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTTTTACTTCTACCTCCTaGCCAAGCAGTTCACATACA +
Preference number: 3 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIFTSTS*PSSSHT
Trigger: TGTATGTGAACTGCTTGGCAAGGAGGTAGAAGTAAA...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCAATTAAGCCTCAGTGCTaGTACCACAATATGACTTTC +
Preference number: 3 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSIKPQC*YHNMTF
Trigger: GAAAGTCATATTGTGGTACAAGCACTGAGGCTTAAT...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 72 bp CCAAGTCCCCTTATGAGATTAATAATGAATTCGTCATaGTCTCTGCAACCATGTAGATGTGACAAACCATTC +
Preference number: 3 (lower is better)
Translates to: PSPLMRLIMNSS*SLQPCRCDKPF
Trigger: GAATGGTTTGTCACATCTACATGGTTGCAGAGATCATGACGAATTCATTATTAATCTCATAAGGGGACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 72 bp TGCCCAATGAAAAACCTCTTTGGTAAATTCCAAACGTaGCTTCATATTCAGATTTCCACCAAGTCCCCTTAT +
Preference number: 3 (lower is better)
Translates to: CPMKNLFGKFQT*LHIQISTKSPY
Trigger: ATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTACCAAAGAGGTTTTTCATTGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR GCA 72 bp GCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTaGTTCAGTTCATATCCTCTGGAAATCTTTGGAGAA +
Preference number: 3 (lower is better)
Translates to: ASCSTCLRSFLN*FSSYPLEIFGE
Trigger: TTCTCCAAAGATTTCCAGAGGATATGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGATTCCTGAAATCCTTGTaGAAACTCTTCATAAAAGGC +
Preference number: 3 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRFLKSL*KLFIKG
Trigger: GCCTTTTATGAAGAGTTTCAACAAGGATTTCAGGAA...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGACTTCATAGTTCGACTTaGGCTGTCTTCATAATCAAT +
Preference number: 3 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRLHSST*AVFIIN
Trigger: ATTGATTATGAAGACAGCCAAAGTCGAACTATGAAG...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTTCTTCATCAACTCTGTaGAAGCGTGTCTGTTCTTTT +
Preference number: 3 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLISSSTL*KRVCSF
Trigger: AAAAGAACAGACACGCTTCAACAGAGTTGATGAAGA...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGATATTGTTTCACTACTTaGCCAGTTTTACAAAGCGCA +
Preference number: 3 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRYCFTT*PVLQSA
Trigger: TGCGCTTTGTAAAACTGGCAAAGTAGTGAAACAATA...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR-3UTR CAA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGATATCGAGGCATAGCTTaGGGATTCATAGTATATTGT +
Preference number: 3 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRYRGIA*GFIVYC
Trigger: ACAATATACTATGAATCCCAAAGCTATGCCTCGATA...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 72 bp TCAAAGAAAGAACAAGCAGATCAAATAACTTCTGGATaGGATCATCAATCACAGTCTTCACAGGGTTGCAAT +
Preference number: 3 (lower is better)
Translates to: SKKEQADQITSG*DHQSQSSQGCN
Trigger: ATTGCAACCCTGTGAAGACTGTGATTGATGATCTCATCCAGAAGTTATTTGATCTGCTTGTTCTTTCTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CCA 72 bp AGTAGCACTTGTCTGTCAGTGGAGTATAAACCAGTTTaGAAGCATTACCCTGATATTCATAAGTATACTGAA +
Preference number: 3 (lower is better)
Translates to: SSTCLSVEYKPV*KHYPDIHKYTE
Trigger: TTCAGTATACTTATGAATATCAGGGTAATGCTTCCAAACTGGTTTATACTCCACTGACAGACAAGTGCTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 72 bp CATTCTCTTGTGTCCATGTCAATATGGCCTAATAATTaGTATCGAGGCATAGCTTTGGGATTCATAGTATAT +
Preference number: 3 (lower is better)
Translates to: HSLVSMSIWPNN*YRGIALGFIVY
Trigger: ATATACTATGAATCCCAAAGCTATGCCTCGATATCAATTATTAGGCCATATTGACATGGACACAAGAGAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR TCA 72 bp TTTAAGGATTGGAGAAGGCATCTATTATCTCCAACCTaGTTTACTATATCTTTCCAGTCTTTAATCAGCTTC +
Preference number: 3 (lower is better)
Translates to: FKDWRRHLLSPT*FTISFQSLISF
Trigger: GAAGCTGATTAAAGACTGGAAAGATATAGTAAATCAGGTTGGAGATAATAGATGCCTTCTCCAATCCTTAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp GAGGCTACAAATTTAAGGCTATCCACAGAACGACCCACTGCCCTTGCAGTTTCCCTGGGCCTTCCCACTTaGTCTGCCATGCGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: EATNLRLSTERPTALAVSLGLPT*SAMRED
Trigger: GTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAG...GGAAACTGCAAGGGCAGTGGGTCGTTCTGTGGATAGCCTTAAATTTGTAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp AGCTTTATCTACCCAGTTCTGTATTGCAAGGGCACGGGCAACAAGACCTCTCAGGATCATGCGCTGAGATaGGCGAGCGATATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SFIYPVLYCKGTGNKTSQDHALR*ASDIGR
Trigger: CCTGCCAATATCGCTCGCTCATCTCAGCGCATGATC...CTGAGAGGTCTTGTTGCCCGTGCCCTTGCAATACAGAACTGGGTAGATAAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR GCA 90 bp CACTGCCCTTGCAGTTTCCTGGCGAAGAGCATTAAGAAATGTGTCTGGATGGAACACAGAACGACCCACTaGCCTTGCAGTTTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: HCPCSFLAKSIKKCVWMEHRTTH*PCSFLA
Trigger: CGCCAGGAAACTGCAAGGGCAGTGGGTCGTTCTGTG...TTCCATCCAGACACATTTCTTAATGCTCTTCGCCAGGAAACTGCAAGGGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp GATCTTCTGGGCCTTCCCACTTGCTCTGCCATGCGAGAGGACACTTTTGGTTTAGAACTGATCATGCGCTaGGATGAGCGAGCGATATTG +
Preference number: 4 (lower is better)
Translates to: DLLGLPTCSAMREDTFGLELIMR*DERAIL
Trigger: CAATATCGCTCGCTCATCTCAGCGCATGATCAGTTC...TAAACCAAAAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACACAGTCCCGTTCGCCATaGTTGGAAGGGGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SSRSKTTCCASIPASCSTQSRSP*LEGVEG
Trigger: TCCCTCCACCCCTTCCAATCATGGCGAACGGGACTG...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp GAGGCTACAAATTTAAGGCTATCCACAGAACGACCCACTGCCCTTGCAGTTTCCTACCCAGTTCTGTATTaGAAGGGCACGGGCAACAAG +
Preference number: 4 (lower is better)
Translates to: EATNLRLSTERPTALAVSYPVLY*KGTGNK
Trigger: CTTGTTGCCCGTGCCCTTGCAATACAGAACTGGGTA...GGAAACTGCAAGGGCAGTGGGTCGTTCTGTGGATAGCCTTAAATTTGTAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR GCA 90 bp GAGGCTACAAATTTAAGGCTATCCACAGAACGACCCACTGCCCTTGCAGTTTCCTCCACTGGTCTTGGTTaGCCCCACATGGAACATCAA +
Preference number: 4 (lower is better)
Translates to: EATNLRLSTERPTALAVSSTGLG*PHMEHQ
Trigger: TTGATGTTCCATGTGGGGGCAACCAAGACCAGTGGA...GGAAACTGCAAGGGCAGTGGGTCGTTCTGTGGATAGCCTTAAATTTGTAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR GCA 90 bp GTCTTGGTTGCCCCCACATGGAACATCAATATTGGTAACCACACGATCCCTTTCCCTTCCCACTTGCTCTaGCATGCGAGAGGACACTTT +
Preference number: 4 (lower is better)
Translates to: VLVAPTWNINIGNHTIPFPSHLL*HARGHF
Trigger: AAAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGG...GAAAGGGATCGTGTGGTTACCAATATTGATGTTCCATGTGGGGGCAACCAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CCA 90 bp GATCTTCTGGGCCTTCCCACTTGCTCTGCCATGCGAGAGGACACTTTTGGTTTACTTGACCTTGACCCATaGCAACCTGGTGATAACACT +
Preference number: 4 (lower is better)
Translates to: DLLGLPTCSAMREDTFGLLDLDP*QPGDNT
Trigger: AGTGTTATCACCAGGTTGCCATGGGTCAAGGTCAAG...TAAACCAAAAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTACGGATCGCTGCACCCTaGGGAGCATCTGGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALRIAAP*GASGCR
Trigger: ACGGCAACCAGATGCTCCTCAGGGTGCAGCGATCCG...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTGTGAGACTGAATCACTaGTGGGTTGGTAGACTGGCC +
Preference number: 4 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFVRLNH*WVGRLA
Trigger: GGCCAGTCTACCAACCCATCAGTGATTCAGTCTCAC...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GAGGCTACAAATTTAAGGCTATCCACAGAACGACCCACTGCCCTTGCAGTTTCCGGAGTAAAGTTGGGATaGACTTCTGCAGTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: EATNLRLSTERPTALAVSGVKLG*TSAVSQ
Trigger: TTGGCTCACTGCAGAAGTTCATCCCAACTTTACTCC...GGAAACTGCAAGGGCAGTGGGTCGTTCTGTGGATAGCCTTAAATTTGTAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp TCTACCCAGTTCTGTATTGCAAGGGCACGGGCAACAAGACCTCTCAGGTATTGTGAAACCATGCAAGACTaGAGAGAGCATGAGCTCGAT +
Preference number: 4 (lower is better)
Translates to: STQFCIARARATRPLRYCETMQD*REHELD
Trigger: ATCGAGCTCATGCTCTCTTCAGTCTTGCATGGTTTC...ACAATACCTGAGAGGTCTTGTTGCCCGTGCCCTTGCAATACAGAACTGGGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR GCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGACCTGCGTCGGATCGCTaGACCCTGAGGAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRPASDR*TLRSIW
Trigger: CCAGATGCTCCTCAGGGTGCAGCGATCCGACGCAGG...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTGGAAAAGGAGATTCCTaGGTCGGATCGCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: VTSPCARLFKSLRSAALAGKGDS*VGSLHP
Trigger: AGGGTGCAGCGATCCGACGCAGGAATCTCCTTTTCC...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp TCTACCCAGTTCTGTATTGCAAGGGCACGGGCAACAAGACCTCTCAGGTATTGTAGAATATGGACCACATaGATCCTGTGGAATCCAGCC +
Preference number: 4 (lower is better)
Translates to: STQFCIARARATRPLRYCRIWTT*ILWNPA
Trigger: GGCTGGATTCCACAGGATGCATGTGGTCCATATTCT...ACAATACCTGAGAGGTCTTGTTGCCCGTGCCCTTGCAATACAGAACTGGGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR GCA 90 bp GTCTTGGTTGCCCCCACATGGAACATCAATATTGGTAACCACACGATCCCTTTCAGTACGCCACAGAGCTaGATCTTCAAAGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: VLVAPTWNINIGNHTIPFSTPQS*IFKAEG
Trigger: ACCCTCTGCTTTGAAGATGCAGCTCTGTGGCGTACT...GAAAGGGATCGTGTGGTTACCAATATTGATGTTCCATGTGGGGGCAACCAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CCA 90 bp CCCAGTTCTGTATTGCAAGGGCACGGGCAACAAGACCTCTCAGGTATTGTAAGGGCACTGATGACACGCTaGGAGAATCAAGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: PSSVLQGHGQQDLSGIVRALMTR*ENQADF
Trigger: AAAATCAGCTTGATTCTCCCAGCGTGTCATCAGTGC...CCTTACAATACCTGAGAGGTCTTGTTGCCCGTGCCCTTGCAATACAGAACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCGGATCGCTGCACCCTaGGGAGCATCTGGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICRIAAP*GASGCR
Trigger: ACGGCAACCAGATGCTCCTCAGGGTGCAGCGATCCG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTGGGTCAACTGCACCTTaGGAACTTCGCCCAGTAGTA +
Preference number: 4 (lower is better)
Translates to: VTSPCARLFKSLRSAALAGSTAP*ELRPVV
Trigger: TACTACTGGGCGAAGTTCTCAAGGTGCAGTTGACCC...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTAGCTCATTGTCTGGATaGGACATAGCTACGGGCCTG +
Preference number: 4 (lower is better)
Translates to: VTSPCARLFKSLRSAALASSLSG*DIATGL
Trigger: CAGGCCCGTAGCTATGTCTCATCCAGACAATGAGCT...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GATCTTCTGGGCCTTCCCACTTGCTCTGCCATGCGAGAGGACACTTTTGGTTTAAGACTGAAGAGAGCATaGGCTCGATGTGTATTATCT +
Preference number: 4 (lower is better)
Translates to: DLLGLPTCSAMREDTFGLRLKRA*ARCVLS
Trigger: AGATAATACACATCGAGCTCATGCTCTCTTCAGTCT...TAAACCAAAAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp CCCAGTTCTGTATTGCAAGGGCACGGGCAACAAGACCTCTCAGGTATTGTAAGGGGAGGAGGCACTTTCTaGTGTATTAGGTTTGAATTC +
Preference number: 4 (lower is better)
Translates to: PSSVLQGHGQQDLSGIVRGGGTF*CIRFEF
Trigger: GAATTCAAACCTAATACATCAGAAAGTGCCTCCTCC...CCTTACAATACCTGAGAGGTCTTGTTGCCCGTGCCCTTGCAATACAGAACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp AAATTTAAGGCTATCCACAGAACGACCCACTGCCCTTGCAGTTTCCTGGCGAAGCTGGAATTTTCTCAATaGCAGCACGATAGTCCTACC +
Preference number: 4 (lower is better)
Translates to: KFKAIHRTTHCPCSFLAKLEFSQ*QHDSPT
Trigger: GGTAGGACTATCGTGCTGTCATTGAGAAAATTCCAG...CTTCGCCAGGAAACTGCAAGGGCAGTGGGTCGTTCTGTGGATAGCCTTAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCCTGCGTCGGATCGCTaGACCCTGAGGAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICPASDR*TLRSIW
Trigger: CCAGATGCTCCTCAGGGTGCAGCGATCCGACGCAGG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACACCCGTTCGCCATGATTaGAAGGGGTGGAGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: SSRSKTTCCASIPASCSTPVRHD*KGWREV
Trigger: AACTTCCCTCCACCCCTTCCAATCATGGCGAACGGG...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp AGCTTTATCTACCCAGTTCTGTATTGCAAGGGCACGGGCAACAAGACCTCTCAGGCAGCAAGAGACTGGTaGACACTTTGTACTAAACGA +
Preference number: 4 (lower is better)
Translates to: SFIYPVLYCKGTGNKTSQAARDW*TLCTKR
Trigger: TCGTTTAGTACAAAGTGTCCACCAGTCTCTTGCTGC...CTGAGAGGTCTTGTTGCCCGTGCCCTTGCAATACAGAACTGGGTAGATAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCAGTCCCGTTCGCCATaGTTGGAAGGGGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICQSRSP*LEGVEG
Trigger: TCCCTCCACCCCTTCCAATCATGGCGAACGGGACTG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTTGTCAGGAGTCTGAATaGCTGGAAGAGTTAAGCCGT +
Preference number: 4 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFCQESE*LEELSR
Trigger: ACGGCTTAACTCTTCCAGTCATTCAGACTCCTGACA...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp TCTACCCAGTTCTGTATTGCAAGGGCACGGGCAACAAGACCTCTCAGGTATTGTCTTTGTATAAACGTTTaGGATTTAGAGGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: STQFCIARARATRPLRYCLCINV*DLEAVG
Trigger: CCCCACTGCCTCTAAATCTCAAACGTTTATACAAAG...ACAATACCTGAGAGGTCTTGTTGCCCGTGCCCTTGCAATACAGAACTGGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR GCA 90 bp TCAAATTTGGAACCAGCTGTTATGGATCTGCCCAAAATCCTCAACTGTGAAATAACGACCCACTGCCCTTaGAGTTTCCTGGCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SNLEPAVMDLPKILNCEITTHCP*SFLAKS
Trigger: GCTCTTCGCCAGGAAACTGCAAGGGCAGTGGGTCGT...TATTTCACAGTTGAGGATTTTGGGCAGATCCATAACAGCTGGTTCCAAATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR GCA 90 bp GAGGCTACAAATTTAAGGCTATCCACAGAACGACCCACTGCCCTTGCAGTTTCCAAACAGGCAAAGAGATaGACTCATCCGGAGAATATG +
Preference number: 4 (lower is better)
Translates to: EATNLRLSTERPTALAVSKQAKR*THPENM
Trigger: CATATTCTCCGGATGAGTGCATCTCTTTGCCTGTTT...GGAAACTGCAAGGGCAGTGGGTCGTTCTGTGGATAGCCTTAAATTTGTAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR GCA 90 bp CACTTGTGTAAACAGGCAAAGAGATGCACTCATCCGGAGAATATGGACCACATGAGAGCCAGTCTCCATTaGGGGCACATTCTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: HLCKQAKRCTHPENMDHMRASLH*GHILLA
Trigger: TGCTAAAAGAATGTGCCCGCAATGGAGACTGGCTCT...CATGTGGTCCATATTCTCCGGATGAGTGCATCTCTTTGCCTGTTTACACAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR GCA 90 bp AAATTTAAGGCTATCCACAGAACGACCCACTGCCCTTGCAGTTTCCTGGCGAAGGTCCTACCAAAATGCTaGAGGATTGTGGTAGAGATA +
Preference number: 4 (lower is better)
Translates to: KFKAIHRTTHCPCSFLAKVLPKC*RIVVEI
Trigger: TATCTCTACCACAATCCTGCAGCATTTTGGTAGGAC...CTTCGCCAGGAAACTGCAAGGGCAGTGGGTCGTTCTGTGGATAGCCTTAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CCA 90 bp TGGCCTCTTCAAAGACCTGCTTTAATGCAGCACTTAGTTCATCATATTCCACTTCATGATTGGAAGGGGTaGAGGGAAGTTGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: WPLQRPALMQHLVHHIPLHDWKG*REVGGR
Trigger: CCTTCCCCCAACTTCCCTCCACCCCTTCCAATCATG...AAGTGGAATATGATGAACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAGCGTGTCTGTTCTTTTaGCAATGCTCCACGGCCGAA +
Preference number: 4 (lower is better)
Translates to: SSRSKTTCCASIPASCSTACLFF*QCSTAE
Trigger: TTCGGCCGTGGAGCATTGCCAAAAGAACAGACACGC...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GAGGCTACAAATTTAAGGCTATCCACAGAACGACCCACTGCCCTTGCAGTTTCCGGGTCTGATAAAGACTaGGGAGAGCAATCTTTAATG +
Preference number: 4 (lower is better)
Translates to: EATNLRLSTERPTALAVSGSDKD*GEQSLM
Trigger: CATTAAAGATTGCTCTCCCCAGTCTTTATCAGACCC...GGAAACTGCAAGGGCAGTGGGTCGTTCTGTGGATAGCCTTAAATTTGTAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CCA 90 bp AAATTTAAGGCTATCCACAGAACGACCCACTGCCCTTGCAGTTTCCTGGCGAAGAGGTTTGTCGTCCTCTaGAATTTTCTCAATGACAGC +
Preference number: 4 (lower is better)
Translates to: KFKAIHRTTHCPCSFLAKRFVVL*NFLNDS
Trigger: GCTGTCATTGAGAAAATTCCAGAGGACGACAAACCT...CTTCGCCAGGAAACTGCAAGGGCAGTGGGTCGTTCTGTGGATAGCCTTAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CCA 90 bp TGCCCTTGCAGTTTCCTGGCGAAGAGCATTAAGAAATGTGTCTGGATGGAAAAGATGAGCGAGCGATATTaGCAGGCAGACCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: CPCSFLAKSIKKCVWMEKMSERY*QADQRN
Trigger: GTTTCTTTGGTCTGCCTGCCAATATCGCTCGCTCAT...CTTTTCCATCCAGACACATTTCTTAATGCTCTTCGCCAGGAAACTGCAAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR CAA 72 bp CTGGCTCAGTTTCTGCAGGAGATGTCGAGAAGTGGTTaGTGCACTACAGTGAACTGTAGCAATTTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: LAQFLQEMSRSG*CTTVNCSNLSG
Trigger: TCCACTCAAATTGCTACAGTTCACTGTAGTGCACAAACCACTTCTCGACATCTCCTGCAGAAACTGAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACATTGCACAACAGTGGCTaGTCCCAGAGTTCAGACATC +
Preference number: 4 (lower is better)
Translates to: SSRSKTTCCASIPASCSTLHNSG*SQSSDI
Trigger: GATGTCTGAACTCTGGGATCAGCCACTGTTGTGCAA...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp TCAAATTTGGAACCAGCTGTTATGGATCTGCCCAAAATCCTCAACTGTGAAATAGCCCAGCTTCGTTCCTaGTCTATCCAAGACGGAAGC +
Preference number: 4 (lower is better)
Translates to: SNLEPAVMDLPKILNCEIAQLRS*SIQDGS
Trigger: GCTTCCGTCTTGGATAGATCAGGAACGAAGCTGGGC...TATTTCACAGTTGAGGATTTTGGGCAGATCCATAACAGCTGGTTCCAAATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp CTCAGTAAAGTAGTTCCTCTGATGACTTTGCTGAGAGCAGCAAGAGACTGGTGGAAACTGCTTCAGGTATaGCTGAAGAACTCTAAGGTC +
Preference number: 4 (lower is better)
Translates to: LSKVVPLMTLLRAARDWWKLLQV*LKNSKV
Trigger: GACCTTAGAGTTCTTCAGTCATACCTGAAGCAGTTT...CCACCAGTCTCTTGCTGCTCTCAGCAAAGTCATCAGAGGAACTACTTTACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR GCA 90 bp TGGCCTCTTCAAAGACCTGCTTTAATGCAGCACTTAGTTCATCATATTCCACTTCAGAGATGGGTCAACTaGACCTTGAGAACTTCGCCC +
Preference number: 4 (lower is better)
Translates to: WPLQRPALMQHLVHHIPLQRWVN*TLRTSP
Trigger: GGGCGAAGTTCTCAAGGTGCAGTTGACCCATCTCTG...AAGTGGAATATGATGAACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp TGGCCTCTTCAAAGACCTGCTTTAATGCAGCACTTAGTTCATCATATTCCACTTACCCTGAGGAGCATCTaGTTGCCGTCATCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: WPLQRPALMQHLVHHIPLTLRSI*LPSSKK
Trigger: CTTCTTGGATGACGGCAACCAGATGCTCCTCAGGGT...AAGTGGAATATGATGAACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTCTGGAACTCATCGCTTaGTGTAAGGATACCTCGTGT +
Preference number: 4 (lower is better)
Translates to: VTSPCARLFKSLRSAALALELIA*CKDTSC
Trigger: ACACGAGGTATCCTTACACCAAGCGATGAGTTCCAG...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CAA 72 bp CATCTTGAGGTTCCCGAACCACTTGACGAGCACTATTaGTCAAAACACCATCAGACCATTCTCTTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: HLEVPEPLDEHY*SKHHQTILLCP
Trigger: TGGACACAAGAGAATGGTCTGATGGTGTTTTGACAAATAGTGCTCGTCAAGTGGTTCGGGAACCTCAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAAAAAGGTCAAGCCAGTaGTCTGGAGAAAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: SSRSKTTCCASIPASCSTKRSSQ*SGERCS
Trigger: GGAGCATCTTTCTCCAGATCACTGGCTTGACCTTTT...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTTCTTCATGGCTTGAGTaGGAGTTAAGTAGCACTTGT +
Preference number: 4 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFSSWLE*ELSSTC
Trigger: ACAAGTGCTACTTAACTCTCACTCAAGCCATGAAGA...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCAAGTGGACCGGAGTTGTaGAAATGCGTACCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSSGPEL*KCVPEQ
Trigger: CTGCTCAGGTACGCATTTTCACAACTCCGGTCCACT...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTGAGCCCCAATCTCCTTaGAACACTGATGTTAAAATG +
Preference number: 4 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFEPQSP*NTDVKM
Trigger: CATTTTAACATCAGTGTTTCAAGGAGATTGGGGCTC...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTGGAAAAGGAGATTCCTaGGTCGGATCGCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICGKGDS*VGSLHP
Trigger: AGGGTGCAGCGATCCGACGCAGGAATCTCCTTTTCC...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACATCTTTCCAGCGCTGTTaGTGCCGAAGCAGATCAATA +
Preference number: 4 (lower is better)
Translates to: SSRSKTTCCASIPASCSTSFQRC*CRSRSI
Trigger: TATTGATCTGCTTCGGCAGCAACAGCGCTGGAAAGA...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp TGGCCTCTTCAAAGACCTGCTTTAATGCAGCACTTAGTTCATCATATTCCACTTCTTGCTCCTGAATTATaGCGAGCTCCCCATGTAACG +
Preference number: 4 (lower is better)
Translates to: WPLQRPALMQHLVHHIPLLAPEL*RAPHVT
Trigger: CGTTACATGGGGAGCTCGGCATAATTCAGGAGCAAG...AAGTGGAATATGATGAACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp TGCCCTTGCAGTTTCCTGGCGAAGAGCATTAAGAAATGTGTCTGGATGGAAAAGTCCCAGAGTTTTACATaGAAAAAGAGCCATGGCACT +
Preference number: 4 (lower is better)
Translates to: CPCSFLAKSIKKCVWMEKSQSFT*KKSHGT
Trigger: AGTGCCATGGCTCTTTTTGCATGTAAAACTCTGGGA...CTTTTCCATCCAGACACATTTCTTAATGCTCTTCGCCAGGAAACTGCAAGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR GCA 90 bp ACTGCCCTTGCAGTTTCCTGGCGAAGAGCATTAAGAAATGTGTCTGGATGGAAAATAGTCCTACCAAAATaGTGCAGGATTGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: TALAVSWRRALRNVSGWKIVLPK*CRIVVE
Trigger: CTCTACCACAATCCTGCAGCATTTTGGTAGGACTAT...TTTCCATCCAGACACATTTCTTAATGCTCTTCGCCAGGAAACTGCAAGGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCATGATTGGAAGGGGTaGAGGGAAGTTGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICHDWKG*REVGGR
Trigger: CCTTCCCCCAACTTCCCTCCACCCCTTCCAATCATG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCCCGTTCGCCATGATTaGAAGGGGTGGAGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICPVRHD*KGWREV
Trigger: AACTTCCCTCCACCCCTTCCAATCATGGCGAACGGG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp ACTGCCCTTGCAGTTTCCTGGCGAAGAGCATTAAGAAATGTGTCTGGATGGAAATTGGTTGCCCCCACATaGAACATCAATATTGGTAAC +
Preference number: 4 (lower is better)
Translates to: TALAVSWRRALRNVSGWKLVAPT*NINIGN
Trigger: GTTACCAATATTGATGTTCCATGTGGGGGCAACCAA...TTTCCATCCAGACACATTTCTTAATGCTCTTCGCCAGGAAACTGCAAGGGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CCA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTTCACCAGGCTTTAGTTaGTCCCAACGAGCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFSPGFS*SQRALN
Trigger: ATTTAAAGCTCGTTGGGACCAACTAAAGCCTGGTGA...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTTCTTCATACTGCTATTaGACCAACCCTCCATCCACA +
Preference number: 4 (lower is better)
Translates to: VTSPCARLFKSLRSAALASSYCY*TNPPST
Trigger: TGTGGATGGAGGGTTGGTCCAATAGCAGTATGAAGA...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp CACTGCCCTTGCAGTTTCCTGGCGAAGAGCATTAAGAAATGTGTCTGGATGGAACTTTGCAAGGATAGATaGAAACTCTTGCTCACACAT +
Preference number: 4 (lower is better)
Translates to: HCPCSFLAKSIKKCVWMELCKDR*KLLLTH
Trigger: ATGTGTGAGCAAGAGTTTCCATCTATCCTTGCAAAG...TTCCATCCAGACACATTTCTTAATGCTCTTCGCCAGGAAACTGCAAGGGCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CCA 90 bp CTCAGTAAAGTAGTTCCTCTGATGACTTTGCTGAGAGCAGCAAGAGACTGGTGGCCCATTGTACATCTTTaGCACCATCAAAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LSKVVPLMTLLRAARDWWPIVHL*HHQKVC
Trigger: ACAGACTTTTTGATGGTGCCAAAGATGTACAATGGG...CCACCAGTCTCTTGCTGCTCTCAGCAAAGTCATCAGAGGAACTACTTTACTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CCA 90 bp TGCCCTTGCAGTTTCCTGGCGAAGAGCATTAAGAAATGTGTCTGGATGGAAAAGGCGAGAGGACACTTTTaGTTTAATAAAGCACTTGCC +
Preference number: 4 (lower is better)
Translates to: CPCSFLAKSIKKCVWMEKARGHF*FNKALA
Trigger: GGCAAGTGCTTTATTAAACCAAAAGTGTCCTCTCGC...CTTTTCCATCCAGACACATTTCTTAATGCTCTTCGCCAGGAAACTGCAAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR CAA 72 bp ACTTCTGAACTCAGTAAAGTAGTTCCTCTGATGACTTaGCTGAGAGCAGCAAGAGACTGGTGGACACTTTGT +
Preference number: 4 (lower is better)
Translates to: TSELSKVVPLMT*LRAARDWWTLC
Trigger: ACAAAGTGTCCACCAGTCTCTTGCTGCTCTCAGCAAAGTCATCAGAGGAACTACTTTACTGAGTTCAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACATCATCTACAACATCCTaGGTAGTCTCCACCAAGTCA +
Preference number: 4 (lower is better)
Translates to: SSRSKTTCCASIPASCSTSSTTS*VVSTKS
Trigger: TGACTTGGTGGAGACTACTCAGGATGTTGTAGATGA...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTCAAATGAACCACCTATaGTGTCTAAGAGATGCAACA +
Preference number: 4 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFQMNHL*CLRDAT
Trigger: TGTTGCATCTCTTAGACATCATAGGTGGTTCATTTG...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTCCACTGTTCACAAATTaGAATACCAGCTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFPLFTN*NTSFQT
Trigger: AGTCTGAAAGCTGGTATTTCAATTTGTGAACAGTGG...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp ACTGCCCTTGCAGTTTCCTGGCGAAGAGCATTAAGAAATGTGTCTGGATGGAAACAATGTTCCCTTTTGTaGAGATGGCTTTTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: TALAVSWRRALRNVSGWKQCSLL*RWLLLS
Trigger: TGACAACAAAAGCCATCTTCACAAAAGGGAACATTG...TTTCCATCCAGACACATTTCTTAATGCTCTTCGCCAGGAAACTGCAAGGGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTATCACAGATTATCCATaGGCTGACATCTTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: VTSPCARLFKSLRSAALAITDYP*ADILRF
Trigger: GAACCTCAAGATGTCAGCTCATGGATAATCTGTGAT...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTGTATCCATAGGTTTGTaGAAGTCTGGAGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: VTSPCARLFKSLRSAALAVSIGL*KSGGDS
Trigger: AGAATCTCCTCCAGACTTTCACAAACCTATGGATAC...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTGTGAAAATGCGTACCTaGGCAGCATCCCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIVKMRT*AASLCH
Trigger: GTGGCAAAGGGATGCTGCTCAGGTACGCATTTTCAC...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp TGGCCTCTTCAAAGACCTGCTTTAATGCAGCACTTAGTTCATCATATTCCACTTCAGTCTTCCTCCAGCTaGCATAGAAGCCACAATTTG +
Preference number: 4 (lower is better)
Translates to: WPLQRPALMQHLVHHIPLQSSSS*HRSHNL
Trigger: CAAATTGTGGCTTCTATGTCAGCTGGAGGAAGACTG...AAGTGGAATATGATGAACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTCCTCTTCAAGGCGTTTaGCAAGTTTGTCAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: VTSPCARLFKSLRSAALAPLQGV*QVCQVF
Trigger: AAACACTTGACAAACTTGGCAAACGCCTTGAAGAGG...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCACTGTTCTTTTGGCAATaGTCCACGGCCGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSLFFWQ*STAENG
Trigger: CCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACAG...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTGCCTCTTCAAAGACCTaGTTTAATGCAGCACTTAGT +
Preference number: 4 (lower is better)
Translates to: VTSPCARLFKSLRSAALAASSKT*FNAALS
Trigger: ACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGC...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCAGTCTGGCTCAGTTTCTaGAGGAGATGTCGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSVWLSF*RRCREV
Trigger: CACTTCTCGACATCTCCTGCAGAAACTGAGCCAGAC...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCAGACGACCTACACCACTaGGTCCTGCTAATAGAAGTG +
Preference number: 4 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSDDLHH*VLLIEV
Trigger: CACTTCTATTAGCAGGACGCAGTGGTGTAGGTCGTC...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTTCAATTCCTGCAAGTTaGAGCACATGTTTGAGATCA +
Preference number: 4 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFSIPAS*STCLRS
Trigger: TGATCTCAAACATGTGCTGCAACTTGCAGGAATTGA...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp TTTTGTACTTCTGAACTCAGTAAAGTAGTTCCTCTGATGACTTTGCTGAGAGCAAGAGCCATGGCACTTTaGAATCTGTCCGGTCTTAGC +
Preference number: 4 (lower is better)
Translates to: FCTSELSKVVPLMTLLRARAMAL*NLSGLS
Trigger: GCTAAGACCGGACAGATTGCAAAGTGCCATGGCTCT...TGCTCTCAGCAAAGTCATCAGAGGAACTACTTTACTGAGTTCAGAAGTACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTACCCTGAGGAGCATCTaGTTGCCGTCATCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICTLRSI*LPSSKK
Trigger: CTTCTTGGATGACGGCAACCAGATGCTCCTCAGGGT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTCAAACTCAATCGTGTTaGAAAAGGAGATTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: VTSPCARLFKSLRSAALAQTQSC*KRRFLR
Trigger: ACGCAGGAATCTCCTTTTCCAACACGATTGAGTTTG...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAATTTTTGCCAGAAAGTaGTCCAGATGCATCACCAGG +
Preference number: 4 (lower is better)
Translates to: SSRSKTTCCASIPASCSTIFARK*SRCITR
Trigger: CCTGGTGATGCATCTGGACCACTTTCTGGCAAAAAT...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTAGTCAAGCCAGTGATCTaGAGAAAGATGCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALVKPVI*RKMLPS
Trigger: AGAGGGGAGCATCTTTCTCCAGATCACTGGCTTGAC...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGACTCCACGGCCGAAAATaGGTTCCAAATACACCCACT +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRLHGRK*VPNTPT
Trigger: AGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAG...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTGATGGGTTGGTAGACTaGCCCAATATTTCTAATAAG +
Preference number: 4 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFDGLVD*PNISNK
Trigger: CTTATTAGAAATATTGGGCCAGTCTACCAACCCATC...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTTGCACAACAGTGGCTaGTCCCAGAGTTCAGACATC +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICLHNSG*SQSSDI
Trigger: GATGTCTGAACTCTGGGATCAGCCACTGTTGTGCAA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTTTTCTGCTCCATTCCTaGTCCTTTAACAACATTGGT +
Preference number: 4 (lower is better)
Translates to: VTSPCARLFKSLRSAALAFLLHS*SFNNIG
Trigger: ACCAATGTTGTTAAAGGATCAGGAATGGAGCAGAAA...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTTCAGATAAACCTGATTaGATATCCCTGGACCAATCA +
Preference number: 4 (lower is better)
Translates to: VTSPCARLFKSLRSAALASDKPD*ISLDQS
Trigger: TGATTGGTCCAGGGATATTCAATCAGGTTTATCTGA...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCCAAGTGCAGAGAGCTaGCGAACTTCTCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICPSAES*RTSLRR
Trigger: TCTTCTGAGAGAAGTTCGTCAGCTCTCTGCACTTGG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTCCAAGTGCAGAGAGCTaGCGAACTTCTCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIPSAES*RTSLRR
Trigger: TCTTCTGAGAGAAGTTCGTCAGCTCTCTGCACTTGG...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAATCCCAAGTTATCTGTaGTTTCCCTCCACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRIPSYL*FPSTSC
Trigger: GCAGGAAGTGGAGGGAAATCACAGATAACTTGGGAT...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTAAGCCCATCTGGTACTaGTGCTCCAGAGCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICKPIWY*CSRALY
Trigger: GTACAAAGCTCTGGAGCATCAGTACCAGATGGGCTT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTTCAATTTCATGTAAATaGGCCTGTATGGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFSISCK*ACMDFF
Trigger: GAAGAAGTCCATACAGGCTCATTTACATGAAATTGA...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACATTGCATAGAAACTGCTaGCAGTACAGATTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSRSKTTCCASIPASCSTLHRNC*QYRFFQ
Trigger: CTGGAAGAATCTGTACTGTCAGCAGTTTCTATGCAA...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCACATTCTCCAAAGCGTTaGTTTTCCAGCACCACTTGG +
Preference number: 4 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSHSPKR*FSSTTW
Trigger: CCAAGTGGTGCTGGAAAATCAACGCTTTGGAGAATG...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAGGTTCCCGAACCACTTaGCGAGCACTATTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRGSRTT*RALFVK
Trigger: TTTGACAAATAGTGCTCGTCAAGTGGTTCGGGAACC...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTGATTCTCGTGCCCAATaGAAAACCTCTTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: VTSPCARLFKSLRSAALADSRAQ*KTSLVN
Trigger: ATTTACCAAAGAGGTTTTTCATTGGGCACGAGAATC...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACATCCAGGAACTTCACCTaGAGACAAAAGGCTATTGAT +
Preference number: 4 (lower is better)
Translates to: SSRSKTTCCASIPASCSTSRNFT*RQKAID
Trigger: ATCAATAGCCTTTTGTCTTCAGGTGAAGTTCCTGGA...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp ACATGGAACATCAATATTGGTAACCACACGATCCCTTTCAGCACTTGTGTAAACGATGAACTTCTGCAGTaGGCCAAAGACGAAAGGTAT +
Preference number: 4 (lower is better)
Translates to: TWNINIGNHTIPFSTCVNDELLQ*AKDERY
Trigger: ATACCTTTCGTCTTTGGCTCACTGCAGAAGTTCATC...GTTTACACAAGTGCTGAAAGGGATCGTGTGGTTACCAATATTGATGTTCCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCTTCAAAAGGGGGCCTaGATTGTAATCGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICLQKGA*IVIVPV
Trigger: GACAGGGACGATTACAATTCAGGCCCCCTTTTGAAG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTAAGAAAGTGGTCCAGATaGATCACCAGGAATTCCTCG +
Preference number: 4 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALRKWSR*ITRNSS
Trigger: CGAGGAATTCCTGGTGATGCATCTGGACCACTTTCT...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTCAAGGGCTCAGTATATaGATTATATTGCACAGGATT +
Preference number: 4 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFQGLSI*IILHRI
Trigger: AATCCTGTGCAATATAATCCATATACTGAGCCCTTG...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp ACATGGAACATCAATATTGGTAACCACACGATCCCTTTCAGCACTTGTGTAAACGCCCTTGCAGTTTCCTaGCGAAGAGCATTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: TWNINIGNHTIPFSTCVNALAVS*RRALRN
Trigger: ATTTCTTAATGCTCTTCGCCAGGAAACTGCAAGGGC...GTTTACACAAGTGCTGAAAGGGATCGTGTGGTTACCAATATTGATGTTCCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTGTCAAGCCAGTGATCTaGAGAAAGATGCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICVKPVI*RKMLPS
Trigger: AGAGGGGAGCATCTTTCTCCAGATCACTGGCTTGAC...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
3UTR CAA 72 bp TGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTaGGCTACAATTGTATCAGCTACTCTGAGCAAATCA +
Preference number: 4 (lower is better)
Translates to: CARLFKSLRSAA*ATIVSATLSKS
Trigger: TGATTTGCTCAGAGTAGCTGATACAATTGTAGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CAA 72 bp GATGTGACAAACCATTCATCACAGTCCCAACCAAACTaGTTTCTACCACATAGTCATTCTGCTTTAGAACCC +
Preference number: 4 (lower is better)
Translates to: DVTNHSSQSQPN*FLPHSHSALEP
Trigger: GGGTTCTAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATGGTTTGTCACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGACTTCAGGTCGCAGCTTaGAAAACACCAGCACTTTAT +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRLQVAA*KTPALY
Trigger: ATAAAGTGCTGGTGTTTTTCAAGCTGCGACCTGAAG...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGATATTTCAGGAATGCTTaGAGAAGCTGCTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRYFRNA*RSCCGL
Trigger: CAGTCCACAGCAGCTTCTTCAAGCATTCCTGAAATA...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTATCCCAAGTTATCTGTaGTTTCCCTCCACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICIPSYL*FPSTSC
Trigger: GCAGGAAGTGGAGGGAAATCACAGATAACTTGGGAT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp TCAAATTTGGAACCAGCTGTTATGGATCTGCCCAAAATCCTCAACTGTGAAATACAGTCGACCTTTCCATaGGGCTACAAATTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: SNLEPAVMDLPKILNCEIQSTFP*GYKFKA
Trigger: AGCCTTAAATTTGTAGCCTCATGGAAAGGTCGACTG...TATTTCACAGTTGAGGATTTTGGGCAGATCCATAACAGCTGGTTCCAAATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTAAAAGGTCAAGCCAGTaGTCTGGAGAAAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICKRSSQ*SGERCS
Trigger: GGAGCATCTTTCTCCAGATCACTGGCTTGACCTTTT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTAAAATATTCGTCCCATTaGCTTCACATCGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALKYSSH*LHIDAL
Trigger: GAGGGCATCGATGTGAAGTCAATGGGACGAATATTT...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACACTATATTCAGCAGGCTaGTTCCTCAACCAAGATTTT +
Preference number: 4 (lower is better)
Translates to: SSRSKTTCCASIPASCSTLYSAG*FLNQDF
Trigger: AAAATCTTGGTTGAGGAATCAGCCTGCTGAATATAG...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCATGCATGTCAGGAGTCTaGATGACTGGAAGAGTTAAG +
Preference number: 4 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSCMSGV*MTGRVK
Trigger: CTTAACTCTTCCAGTCATTCAGACTCCTGACATGCA...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTACCGCTCCATGCATGTaGCTGACTAAAGAAGTGATG +
Preference number: 4 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLITAPCM*LTKEVM
Trigger: CATCACTTCTTTAGTCAGTCACATGCATGGAGCGGT...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGACCATCTTGTGAAGCTTaGTCCTTAAGTGGTAACAGC +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRPSCEA*SLSGNS
Trigger: GCTGTTACCACTTAAGGATCAAGCTTCACAAGATGG...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTGTATATGGATTATATTaGACAGGATTCAGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: VTSPCARLFKSLRSAALAVYGLY*TGFRPV
Trigger: TACTGGCCTGAATCCTGTGCAATATAATCCATATAC...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTAGAAAGTGGTCCAGATaGATCACCAGGAATTCCTCG +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICRKWSR*ITRNSS
Trigger: CGAGGAATTCCTGGTGATGCATCTGGACCACTTTCT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACACTTCTGAAAGATTTTTaGCAGAAAGTGGTCCAGATG +
Preference number: 4 (lower is better)
Translates to: SSRSKTTCCASIPASCSTLLKDF*QKVVQM
Trigger: CATCTGGACCACTTTCTGGCAAAAATCTTTCAGAAG...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTTCCAGCGCTGTTGCTaGCGAAGCAGATCAATATTC +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICFQRCC*RSRSIF
Trigger: GAATATTGATCTGCTTCGGCAGCAACAGCGCTGGAA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTTTCCAGCGCTGTTGCTaGCGAAGCAGATCAATATTC +
Preference number: 4 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIFQRCC*RSRSIF
Trigger: GAATATTGATCTGCTTCGGCAGCAACAGCGCTGGAA...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTCTTTCCAGCGCTGTTaGTGCCGAAGCAGATCAATA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICSFQRC*CRSRSI
Trigger: TATTGATCTGCTTCGGCAGCAACAGCGCTGGAAAGA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTGCATGCATGTCACTTaGTTGGAATCCCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICCMHVT*LESLCF
Trigger: GAAGCACAGGGATTCCAAGCAAGTGACATGCATGCA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp TGGCCTCTTCAAAGACCTGCTTTAATGCAGCACTTAGTTCATCATATTCCACTTGACATCTTTTATCAGTaGATCAAACCGGGTGCAATC +
Preference number: 4 (lower is better)
Translates to: WPLQRPALMQHLVHHIPLDIFYQ*IKPGAI
Trigger: GATTGCACCCGGTTTGATGCACTGATAAAAGATGTC...AAGTGGAATATGATGAACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAGTATTTTCTTCATACTaGTATTGGACCAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: SSRSKTTCCASIPASCSTVFSSY*YWTNPP
Trigger: TGGAGGGTTGGTCCAATAGCAGTATGAAGAAAATAC...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp AGTTCTGATAGGTCAAGTGTTTCAGAGAGAAGAGCCTGTTTTTCAGCTTTATCTGTTGGGATGAACTTCTaGAGTGAGCCAAAGACGAAA +
Preference number: 4 (lower is better)
Translates to: SSDRSSVSERRACFSALSVGMNF*SEPKTK
Trigger: TTTCGTCTTTGGCTCACTGCAGAAGTTCATCCCAAC...AGATAAAGCTGAAAAACAGGCTCTTCTCTCTGAAACACTTGACCTATCAGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTACAGTTGCACAACAGTaGCTGATCCCAGAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICTVAQQ*LIPEFR
Trigger: TCTGAACTCTGGGATCAGCCACTGTTGTGCAACTGT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCTGGAACTCATCGCTTaGTGTAAGGATACCTCGTGT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICLELIA*CKDTSC
Trigger: ACACGAGGTATCCTTACACCAAGCGATGAGTTCCAG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTGAATCCTTTAAGGATTaGAGAAGGCATCTATTATCT +
Preference number: 4 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFESFKD*RRHLLS
Trigger: AGATAATAGATGCCTTCTCCAATCCTTAAAGGATTC...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTGAGTATAAACCAGTTTaGAAGCATTACCCTGATATT +
Preference number: 4 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFEYKPV*KHYPDI
Trigger: AATATCAGGGTAATGCTTCCAAACTGGTTTATACTC...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTAGGTTTGTGAAAGTCTaGAGGAGATTCTCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIRFVKV*RRFSCP
Trigger: TGGGCACGAGAATCTCCTCCAGACTTTCACAAACCT...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAATTACCATGCAAGTCTaGCTCAGTTTCTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRITMQV*LSFCRR
Trigger: TCTCCTGCAGAAACTGAGCCAGACTTGCATGGTAAT...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCTTCAGGTCGCAGCTTaGAAAACACCAGCACTTTAT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICLQVAA*KTPALY
Trigger: ATAAAGTGCTGGTGTTTTTCAAGCTGCGACCTGAAG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp TGGCCTCTTCAAAGACCTGCTTTAATGCAGCACTTAGTTCATCATATTCCACTTTGTTTATTTCCACGGTaGGCTTGTTCTATCCAAAAC +
Preference number: 4 (lower is better)
Translates to: WPLQRPALMQHLVHHIPLCLFPR*ACSIQN
Trigger: GTTTTGGATAGAACAAGCTCACCGTGGAAATAAACA...AAGTGGAATATGATGAACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTCATCTACAACATCCTaGGTAGTCTCCACCAAGTCA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICSSTTS*VVSTKS
Trigger: TGACTTGGTGGAGACTACTCAGGATGTTGTAGATGA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAGAGATGCAACATTCGTaGCTCAGGATAATGATCATG +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMREMQHS*LRIMIM
Trigger: CATGATCATTATCCTGAGTCACGAATGTTGCATCTC...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTATTTCAGGAATGCTTaGAGAAGCTGCTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICYFRNA*RSCCGL
Trigger: CAGTCCACAGCAGCTTCTTCAAGCATTCCTGAAATA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCCCACTCCCTTAAACTaGTTTGGAATGCCGATGAAT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICPTPLN*FGMPMN
Trigger: ATTCATCGGCATTCCAAATCAGTTTAAGGGAGTGGG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp TGGCCTCTTCAAAGACCTGCTTTAATGCAGCACTTAGTTCATCATATTCCACTTTTAAACAATCTACCTTaGCAGCACTTGGAAGTCGTT +
Preference number: 4 (lower is better)
Translates to: WPLQRPALMQHLVHHIPLLNNLP*QHLEVV
Trigger: AACGACTTCCAAGTGCTGTCAAGGTAGATTGTTTAA...AAGTGGAATATGATGAACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTATCTTCCAGTCTAAAATaGTGGCAATCATCAACCAGC +
Preference number: 4 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALSSSLK*WQSSTS
Trigger: GCTGGTTGATGATTGCCATCATTTTAGACTGGAAGA...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTACTTCATCAACTCTGTTaGAGCGTGTCTGTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALLHQLC*SVSVLL
Trigger: CAAAAGAACAGACACGCTTCAACAGAGTTGATGAAG...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GACAGGAGAAAGTTCATTAGACCAGATTTCTCTATCAAATTTGGAACCAGCTGTGTTTCTTCCAGAGATTaGGGACAGGAGAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: DRRKFIRPDFSIKFGTSCVSSRD*GQEKVH
Trigger: ATGAACTTTCTCCTGTCCTCAATCTCTGGAAGAAAC...ACAGCTGGTTCCAAATTTGATAGAGAAATCTGGTCTAATGAACTTTCTCCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAAATCAAACCGAAAAGTaGTCCAGTCTTCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRNQTEK*SSLHWP
Trigger: TGGCCAATGAAGACTGGATCACTTTTCGGTTTGATT...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAAATAACAAAGCCAAGTaGAGAGAGCTGACGAACTTC +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRNNKAK*RELTNF
Trigger: GAAGTTCGTCAGCTCTCTGCACTTGGCTTTGTTATT...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCCAGTGTTGTTTCCATaGATGCATGTCACTTGCTTG +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICPVLFP*MHVTCL
Trigger: CAAGCAAGTGACATGCATGCATGGAAACAACACTGG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTATTACTTCTACCTCCTTaGCAAGCAGTTCACATACAG +
Preference number: 4 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALLLLPP*QAVHIQ
Trigger: CTGTATGTGAACTGCTTGGCAAGGAGGTAGAAGTAA...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTATGGAGGAGATTCTCGTaGCCAATGAAAAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALWRRFS*PMKNLF
Trigger: AAAGAGGTTTTTCATTGGGCACGAGAATCTCCTCCA...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp TGGCCTCTTCAAAGACCTGCTTTAATGCAGCACTTAGTTCATCATATTCCACTTTGTTCTATCCAAAACTaGAACTCATCGCTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: WPLQRPALMQHLVHHIPLCSIQN*NSSLGV
Trigger: TACACCAAGCGATGAGTTCCAGTTTTGGATAGAACA...AAGTGGAATATGATGAACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACATTTTTCATTTTTCCATaGATGAGGAACATAGCGCTG +
Preference number: 4 (lower is better)
Translates to: SSRSKTTCCASIPASCSTFFIFP*MRNIAL
Trigger: CAGCGCTATGTTCCTCATCCATGGAAAAATGAAAAA...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTATTTTTGCCAGAAAGTaGTCCAGATGCATCACCAGG +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICIFARK*SRCITR
Trigger: CCTGGTGATGCATCTGGACCACTTTCTGGCAAAAAT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAACCTTCAATTCCAACTaGCGAACCCAAACTATACTG +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRTFNSN*RTQTIL
Trigger: CAGTATAGTTTGGGTTCGCCAGTTGGAATTGAAGGT...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTCTGATTGAATATCCCTaGACCAATCATCAAATTGTT +
Preference number: 4 (lower is better)
Translates to: VTSPCARLFKSLRSAALALIEYP*TNHQIV
Trigger: AACAATTTGATGATTGGTCCAGGGATATTCAATCAG...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAGTTTTCTATTTTCAGTaGCAAGCCGTTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRVFYFQ*QAVQQH
Trigger: ATGCTGCTGAACGGCTTGCCACTGAAAATAGAAAAC...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GAGATTGAGGACAGGAGAAAGTTCATTAGACCAGATTTCTCTATCAAATTTGGAACCACATGCATCCTGTaGAATCCAGCCCATAAAACA +
Preference number: 4 (lower is better)
Translates to: EIEDRRKFIRPDFSIKFGTTCIL*NPAHKT
Trigger: TGTTTTATGGGCTGGATTCCACAGGATGCATGTGGT...TCCAAATTTGATAGAGAAATCTGGTCTAATGAACTTTCTCCTGTCCTCAATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTGCATGTCACTTGCTTaGAATCCCTGTGCTTCTACA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICCMSLA*NPCAST
Trigger: TGTAGAAGCACAGGGATTCCAAGCAAGTGACATGCA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTGGAGATGTCGAGAAGTaGTTTGTGCACTACAGTGAA +
Preference number: 4 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIGDVEK*FVHYSE
Trigger: TTCACTGTAGTGCACAAACCACTTCTCGACATCTCC...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCAAAGCCAAGAACCCATTaGGTAAGAATGCAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSKPRTH*VRMQGV
Trigger: TACTCCTTGCATTCTTACCCAATGGGTTCTTGGCTT...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTATCCATCCACAACACCTaGCATTTCTTATGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALSIHNT*HFLCKA
Trigger: AGCTTTGCATAAGAAATGCCAGGTGTTGTGGATGGA...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GAGATTGAGGACAGGAGAAAGTTCATTAGACCAGATTTCTCTATCAAATTTGGATTCCTTTTCCAGAACTaGCAGCCAAGATACCACAAG +
Preference number: 4 (lower is better)
Translates to: EIEDRRKFIRPDFSIKFGFLFQN*QPRYHK
Trigger: CTTGTGGTATCTTGGCTGCCAGTTCTGGAAAAGGAA...TCCAAATTTGATAGAGAAATCTGGTCTAATGAACTTTCTCCTGTCCTCAATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CCA 90 bp GACAGGAGAAAGTTCATTAGACCAGATTTCTCTATCAAATTTGGAACCAGCTGTAGAGCAGCAAGAGACTaGTGGACACTTTGTACTAAA +
Preference number: 4 (lower is better)
Translates to: DRRKFIRPDFSIKFGTSCRAARD*WTLCTK
Trigger: TTTAGTACAAAGTGTCCACCAGTCTCTTGCTGCTCT...ACAGCTGGTTCCAAATTTGATAGAGAAATCTGGTCTAATGAACTTTCTCCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCTTGGCTTAGCTCTCTaGATTTGTGTATCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICLGLAL*ICVSSS
Trigger: GCTAGAGGATACACAAATCCAGAGAGCTAAGCCAAG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
3UTR CAA 72 bp GGAGAAAGTTCATTAGACCAGATTTCTCTATCAAATTaGGAACCAGCTGTTATGGATCTGCCCAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: GESSLDQISLSN*EPAVMDLPKIL
Trigger: GAGGATTTTGGGCAGATCCATAACAGCTGGTTCCAAATTTGATAGAGAAATCTGGTCTAATGAACTTTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTGAGATGCAACATTCGTaGCTCAGGATAATGATCATG +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICEMQHS*LRIMIM
Trigger: CATGATCATTATCCTGAGTCACGAATGTTGCATCTC...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAGATCTTCTGCTTTGCTaGAAATCGTCAAAAATCCAC +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRDLLLC*KSSKIH
Trigger: GTGGATTTTTGACGATTTTCAGCAAAGCAGAAGATC...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTCTTCCAGTCTAAAATaGTGGCAATCATCAACCAGC +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICSSSLK*WQSSTS
Trigger: GCTGGTTGATGATTGCCATCATTTTAGACTGGAAGA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCATTTCACTGTCATCACTaGATGTTCTTCAACCTTCCT +
Preference number: 4 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSFHCHH*MFFNLP
Trigger: AGGAAGGTTGAAGAACATTCAGTGATGACAGTGAAA...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp TCAAATTTGGAACCAGCTGTTATGGATCTGCCCAAAATCCTCAACTGTGAAATATGCTTCAGGTATGACTaGAGAACTCTAAGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: SNLEPAVMDLPKILNCEICFRYD*RTLRSK
Trigger: TTTTGACCTTAGAGTTCTTCAGTCATACCTGAAGCA...TATTTCACAGTTGAGGATTTTGGGCAGATCCATAACAGCTGGTTCCAAATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCCTCTTCAAGGCGTTTaGCAAGTTTGTCAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICPLQGV*QVCQVF
Trigger: AAACACTTGACAAACTTGGCAAACGCCTTGAAGAGG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTAATAACAAAGCCAAGTaGAGAGAGCTGACGAACTTC +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICNNKAK*RELTNF
Trigger: GAAGTTCGTCAGCTCTCTGCACTTGGCTTTGTTATT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTAATAGATTCATCTCCTaGCTCACCCACTCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICNRFIS*LTHSLK
Trigger: TTTAAGGGAGTGGGTGAGGCAGGAGATGAATCTATT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAAGATCATTTTTGAACTaGTTCAGTTCATATCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSRSKTTCCASIPASCSTRSFLN*FSSYPL
Trigger: CAGAGGATATGAACTGAAGCAGTTCAAAAATGATCT...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTATTGTGCTTCAATTCCTaGAAGTTGCAGCACATGTTT +
Preference number: 4 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALLCFNS*KLQHMF
Trigger: AAACATGTGCTGCAACTTGCAGGAATTGAAGCACAA...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp GACAGGAGAAAGTTCATTAGACCAGATTTCTCTATCAAATTTGGAACCAGCTGTTCTTCTTTCTTGACATaGAGCATGAAACCATGCAAG +
Preference number: 4 (lower is better)
Translates to: DRRKFIRPDFSIKFGTSCSSFLT*SMKPCK
Trigger: CTTGCATGGTTTCATGCTGCATGTCAAGAAAGAAGA...ACAGCTGGTTCCAAATTTGATAGAGAAATCTGGTCTAATGAACTTTCTCCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCAAACTCAATCGTGTTaGAAAAGGAGATTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICQTQSC*KRRFLR
Trigger: ACGCAGGAATCTCCTTTTCCAACACGATTGAGTTTG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTACCTTCAATTCCAACTaGCGAACCCAAACTATACTG +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICTFNSN*RTQTIL
Trigger: CAGTATAGTTTGGGTTCGCCAGTTGGAATTGAAGGT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACATACACAAACCAGATCTaGAATCAGATAAACCTGATT +
Preference number: 4 (lower is better)
Translates to: SSRSKTTCCASIPASCSTYTNQI*NQINLI
Trigger: AATCAGGTTTATCTGATTCCAGATCTGGTTTGTGTA...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTGTTTTCTATTTTCAGTaGCAAGCCGTTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICVFYFQ*QAVQQH
Trigger: ATGCTGCTGAACGGCTTGCCACTGAAAATAGAAAAC...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGATACCTTGACAGCACTTaGAAGTCGTTCTACTTCTTT +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRYLDST*KSFYFF
Trigger: AAAGAAGTAGAACGACTTCCAAGTGCTGTCAAGGTA...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTCACCAGGCTTTAGTTaGTCCCAACGAGCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICSPGFS*SQRALN
Trigger: ATTTAAAGCTCGTTGGGACCAACTAAAGCCTGGTGA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTCGATTCAGTATTCCCTaGATCCTCAGAACTTGTATC +
Preference number: 4 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIRFSIP*ILRTCI
Trigger: GATACAAGTTCTGAGGATCCAGGGAATACTGAATCG...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTAATAAGCTCATTGTCTaGATGAGACATAGCTACGGG +
Preference number: 4 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLINKLIV*MRHSYG
Trigger: CCCGTAGCTATGTCTCATCCAGACAATGAGCTTATT...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAAGCAGTCAAGTCTTCTaGCTTCTTAAGCACATATGT +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRSSQVF*LLKHIC
Trigger: ACATATGTGCTTAAGAAGCCAGAAGACTTGACTGCT...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCAATGCTACCAAAGTACTaGTCCCCCATTTATCAAGTT +
Preference number: 4 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSMLPKY*SPIYQV
Trigger: AACTTGATAAATGGGGGACCAGTACTTTGGTAGCAT...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CAA 72 bp TTGATATCGAGGCATAGCTTTGGGATTCATAGTATATaGTTTCACTACTTTGCCAGTTTTACAAAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LISRHSFGIHSI*FHYFASFTKRS
Trigger: GCTGCGCTTTGTAAAACTGGCAAAGTAGTGAAACAATATACTATGAATCCCAAAGCTATGCCTCGATATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCATCCAAGAAGTTGTTaGTTTCAAGACAGTTGCACA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICHPRSC*FQDSCT
Trigger: TGTGCAACTGTCTTGAAATCAACAACTTCTTGGATG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTTTCTGCTCCATTCCTaGTCCTTTAACAACATTGGT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICFLLHS*SFNNIG
Trigger: ACCAATGTTGTTAAAGGATCAGGAATGGAGCAGAAA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTGTTTATTTCCACGGTaGGCTTGTTCTATCCAAAAC +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICCLFPR*ACSIQN
Trigger: GTTTTGGATAGAACAAGCTCACCGTGGAAATAAACA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCAAATGAACCACCTATaGTGTCTAAGAGATGCAACA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICQMNHL*CLRDAT
Trigger: TGTTGCATCTCTTAGACATCATAGGTGGTTCATTTG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTAGTTCCCAACTTTTTCTaGACAAACCTTCCAAATGAA +
Preference number: 4 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALVPNFF*TNLPNE
Trigger: TTCATTTGGAAGGTTTGTTCAGAAAAAGTTGGGAAC...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCCACTGTTCACAAATTaGAATACCAGCTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICPLFTN*NTSFQT
Trigger: AGTCTGAAAGCTGGTATTTCAATTTGTGAACAGTGG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTCAGATAAACCTGATTaGATATCCCTGGACCAATCA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICSDKPD*ISLDQS
Trigger: TGATTGGTCCAGGGATATTCAATCAGGTTTATCTGA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTGATCTTCTGCTTTGCTaGAAATCGTCAAAAATCCAC +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICDLLLC*KSSKIH
Trigger: GTGGATTTTTGACGATTTTCAGCAAAGCAGAAGATC...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTTAAACAATCTACCTTaGCAGCACTTGGAAGTCGTT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICLNNLP*QHLEVV
Trigger: AACGACTTCCAAGTGCTGTCAAGGTAGATTGTTTAA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTACAAATAACTTCTGGATaGGATCATCAATCACAGTCT +
Preference number: 4 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALQITSG*DHQSQS
Trigger: AGACTGTGATTGATGATCTCATCCAGAAGTTATTTG...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTTTCACTGTCATCACTaGATGTTCTTCAACCTTCCT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICFHCHH*MFFNLP
Trigger: AGGAAGGTTGAAGAACATTCAGTGATGACAGTGAAA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTAAATCTTGGGAATGCTaGGCGTTTTTCCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIKSWEC*AFFLQK
Trigger: TTTTTGGAGGAAAAACGCTCAGCATTCCCAAGATTT...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTAAGTAAACGTAAACTTTaGCATGGTATTAAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALSKRKL*HGIKPQ
Trigger: CTGAGGCTTAATACCATGTCAAAGTTTACGTTTACT...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTAATAATGAATTCGTCATaGTCTCTGCAACCATGTAGA +
Preference number: 4 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALIMNSS*SLQPCR
Trigger: TCTACATGGTTGCAGAGATCATGACGAATTCATTAT...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCAGGTAAATTCCAAACGTaGCTTCATATTCAGATTTCC +
Preference number: 4 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSGKFQT*LHIQIS
Trigger: GGAAATCTGAATATGAAGTCACGTTTGGAATTTACC...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp AGTTCTGATAGGTCAAGTGTTTCAGAGAGAAGAGCCTGTTTTTCAGCTTTATCTCAAAATCCTCAACTGTaGAATAACCTGAGAACTGAT +
Preference number: 4 (lower is better)
Translates to: SSDRSSVSERRACFSALSQNPQL*NNLRTD
Trigger: ATCAGTTCTCAGGTTATTTCACAGTTGAGGATTTTG...AGATAAAGCTGAAAAACAGGCTCTTCTCTCTGAAACACTTGACCTATCAGAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR TCA 90 bp GACAGGAGAAAGTTCATTAGACCAGATTTCTCTATCAAATTTGGAACCAGCTGTTTCAAGAATGATGAATaGCAGTATTGGAGATCCTTG +
Preference number: 4 (lower is better)
Translates to: DRRKFIRPDFSIKFGTSCFKNDE*QYWRSL
Trigger: CAAGGATCTCCAATACTGTCATTCATCATTCTTGAA...ACAGCTGGTTCCAAATTTGATAGAGAAATCTGGTCTAATGAACTTTCTCCTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTATGATGTCTAAGAGATaGAACATTCGTGACTCAGGA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICMMSKR*NIRDSG
Trigger: TCCTGAGTCACGAATGTTGCATCTCTTAGACATCAT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCATTTATATTTCAGGAATaGTTGAAGAAGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSFIFQE*LKKLLW
Trigger: CCACAGCAGCTTCTTCAAGCATTCCTGAAATATAAA...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCTTCTGAAAGATTTTTaGCAGAAAGTGGTCCAGATG +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICLLKDF*QKVVQM
Trigger: CATCTGGACCACTTTCTGGCAAAAATCTTTCAGAAG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTGTTGTTTCCATGCATaGATGTCACTTGCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICCCFHA*MSLAWN
Trigger: ATTCCAAGCAAGTGACATGCATGCATGGAAACAACA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTTTAGAGATACTACTTaGCAGGGAGAAATTAGGCTC +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICFRDTT*QGEIRL
Trigger: GAGCCTAATTTCTCCCTGGCAAGTAGTATCTCTAAA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTTTTAGAGATACTACTTaGCAGGGAGAAATTAGGCTC +
Preference number: 4 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIFRDTT*QGEIRL
Trigger: GAGCCTAATTTCTCCCTGGCAAGTAGTATCTCTAAA...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTAATTGTTTCACTACTTTaGCAGTTTTACAAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALIVSLL*QFYKAQ
Trigger: CTGCGCTTTGTAAAACTGGCAAAGTAGTGAAACAAT...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTATTCGTCATGATCTCTaGAACCATGTAGATGTGACA +
Preference number: 4 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIIRHDL*NHVDVT
Trigger: TGTCACATCTACATGGTTGCAGAGATCATGACGAAT...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTACCTGGCATTTCTTATaGAAAGCTGGATTACTCTCA +
Preference number: 4 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLITWHFL*KAGLLS
Trigger: TGAGAGTAATCCAGCTTTGCATAAGAAATGCCAGGT...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTGTTCTATCCAAAACTaGAACTCATCGCTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICCSIQN*NSSLGV
Trigger: TACACCAAGCGATGAGTTCCAGTTTTGGATAGAACA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTACCTTGACAGCACTTaGAAGTCGTTCTACTTCTTT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICYLDST*KSFYFF
Trigger: AAAGAAGTAGAACGACTTCCAAGTGCTGTCAAGGTA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
3UTR CAA 72 bp ATAGCTTTGGGATTCATAGTATATTGTTTCACTACTTaGCCAGTTTTACAAAGCGCAGCCCTTAACATTCTC +
Preference number: 4 (lower is better)
Translates to: IALGFIVYCFTT*PVLQSAALNIL
Trigger: GAGAATGTTAAGGGCTGCGCTTTGTAAAACTGGCAAAGTAGTGAAACAATATACTATGAATCCCAAAGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
3UTR CAA 72 bp GAGCACTATTTGTCAAAACACCATCAGACCATTCTCTaGTGTCCATGTCAATATGGCCTAATAATTGATATC +
Preference number: 4 (lower is better)
Translates to: EHYLSKHHQTIL*CPCQYGLIIDI
Trigger: GATATCAATTATTAGGCCATATTGACATGGACACAAGAGAATGGTCTGATGGTGTTTTGACAAATAGTGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTGTTCCCAACTTTTTCTaGACAAACCTTCCAAATGAA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICVPNFF*TNLPNE
Trigger: TTCATTTGGAAGGTTTGTTCAGAAAAAGTTGGGAAC...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTGATTTGGAATGCCGATaGATCTCTTCATTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICDLECR*ISSFLY
Trigger: ATAGAGAAATGAAGAGATTCATCGGCATTCCAAATC...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCAAATAACTTCTGGATaGGATCATCAATCACAGTCT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICQITSG*DHQSQS
Trigger: AGACTGTGATTGATGATCTCATCCAGAAGTTATTTG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTCAATTTCATGTAAATaGGCCTGTATGGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICSISCK*ACMDFF
Trigger: GAAGAAGTCCATACAGGCTCATTTACATGAAATTGA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR TCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTATATGGCCTAATAATTaGTATCGAGGCATAGCTTTG +
Preference number: 4 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIIWPNN*YRGIAL
Trigger: CAAAGCTATGCCTCGATATCAATTATTAGGCCATAT...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTGTATATGGATTATATTaGACAGGATTCAGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICVYGLY*TGFRPV
Trigger: TACTGGCCTGAATCCTGTGCAATATAATCCATATAC...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTTTATATTTCAGGAATaGTTGAAGAAGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICFIFQE*LKKLLW
Trigger: CCACAGCAGCTTCTTCAAGCATTCCTGAAATATAAA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTTCAGTGAATTTAATCTaGTCCGCCAAGCATAAAATC +
Preference number: 4 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLISVNLI*SAKHKI
Trigger: GATTTTATGCTTGGCGGAGCAGATTAAATTCACTGA...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCTTCTGCAACAGTCATaGTTCATAACTTCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICLLQQS*FITSQD
Trigger: ATCTTGAGAAGTTATGAAGCATGACTGTTGCAGAAG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTTTTTCATTTTTCCATaGATGAGGAACATAGCGCTG +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICFFIFP*MRNIAL
Trigger: CAGCGCTATGTTCCTCATCCATGGAAAAATGAAAAA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCAAGGGCTCAGTATATaGATTATATTGCACAGGATT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICQGLSI*IILHRI
Trigger: AATCCTGTGCAATATAATCCATATACTGAGCCCTTG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCATTCTTTGCTTATAGTTaGACGCTTTACCAACTCTTT +
Preference number: 4 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSFFAYS*TLYQLF
Trigger: AAAGAGTTGGTAAAGCGTCCAACTATAAGCAAAGAA...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGATCATATAGTTTAAGCTaGTCTAAGAGATCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRSYSLS*SKRSLA
Trigger: TGCCAAAGATCTCTTAGACCAGCTTAAACTATATGA...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTCCCTTAAACTGATTTaGAATGCCGATGAATCTCTT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICSLKLI*NADESL
Trigger: AAGAGATTCATCGGCATTCCAAATCAGTTTAAGGGA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTCTAAACAGATCTTCTaGTTTGCTGAAAATCGTCAA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICSKQIF*FAENRQ
Trigger: TTGACGATTTTCAGCAAAGCAGAAGATCTGTTTAGA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR GCA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTTCTAAACAGATCTTCTaGTTTGCTGAAAATCGTCAA +
Preference number: 4 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLISKQIF*FAENRQ
Trigger: TTGACGATTTTCAGCAAAGCAGAAGATCTGTTTAGA...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTTCTTTGCTTATAGTTaGACGCTTTACCAACTCTTT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICFFAYS*TLYQLF
Trigger: AAAGAGTTGGTAAAGCGTCCAACTATAAGCAAAGAA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTCATATAGTTTAAGCTaGTCTAAGAGATCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICSYSLS*SKRSLA
Trigger: TGCCAAAGATCTCTTAGACCAGCTTAAACTATATGA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCTGATTGAATATCCCTaGACCAATCATCAAATTGTT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICLIEYP*TNHQIV
Trigger: AACAATTTGATGATTGGTCCAGGGATATTCAATCAG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTACACAAACCAGATCTaGAATCAGATAAACCTGATT +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICYTNQI*NQINLI
Trigger: AATCAGGTTTATCTGATTCCAGATCTGGTTTGTGTA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CCA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTGTAAATGAGCCTGTATaGACTTCTTCAAAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: AFLKVISKLILGLALWICVNEPV*TSSKKE
Trigger: TTCTTTCTTTGAAGAAGTCCATACAGGCTCATTTAC...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
3UTR CAA 72 bp ATTAGGTTTGAATTCTGGTTTAGTTTCTTCCAGAGATaGAGGACAGGAGAAAGTTCATTAGACCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: IRFEFWFSFFQR*RTGESSLDQIS
Trigger: AGAAATCTGGTCTAATGAACTTTCTCCTGTCCTCAATCTCTGGAAGAAACTAAACCAGAATTCAAACCTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
3UTR CAA 72 bp AAAGTACTGGTCCCCCATTTATCAAGTTTAGGTAGGTaGATATCTTTTAAGTACAGAACAAGTCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: KVLVPHLSSLGR*ISFKYRTSLSQ
Trigger: CTGTGAAAGACTTGTTCTGTACTTAAAAGATATCAACCTACCTAAACTTGATAAATGGGGGACCAGTACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GTCTTGGTTGCCCCCACATGGAACATCAATATTGGTAACCACACGATCCCTTTCTCTGGGCCTTCCCACTaGCTCTGCCATGCGAGAGGA +
Preference number: 5 (lower is better)
Translates to: VLVAPTWNINIGNHTIPFSGPSH*LCHARG
Trigger: TCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGA...GAAAGGGATCGTGTGGTTACCAATATTGATGTTCCATGTGGGGGCAACCAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CAA 90 bp CCCAGTTCTGTATTGCAAGGGCACGGGCAACAAGACCTCTCAGGTATTGTAAGGCTGAATCCACTGGTCTaGGTTGCCCCCACATGGAAC +
Preference number: 5 (lower is better)
Translates to: PSSVLQGHGQQDLSGIVRLNPLV*VAPTWN
Trigger: GTTCCATGTGGGGGCAACCAAGACCAGTGGATTCAG...CCTTACAATACCTGAGAGGTCTTGTTGCCCGTGCCCTTGCAATACAGAACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS GCA 90 bp CCAAACTCAATCGTGTTGGAAAAGGAGATTCCTGCGTCGGATCGCTaGACCCTGAGGAGCATCTGGTTGCCGTCATCCAAGAAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PNSIVLEKEIPASDR*TLRSIWLPSSKKLL
Trigger: CAACAACTTCTTGGATGACGGCAACCAGATGCTCCTCAGGGTGCAGCGATCCGACGCAGGAATCTCCTTTTCCAACACGATTGAGTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS GCA 90 bp CAAGACCTCTCAGGTATTGTAAGGGATCTTCTGGGCCTTCCCACTTaGTCTGCCATGCGAGAGGACACTGTGCTTCTACAGTTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: QDLSGIVRDLLGLPT*SAMREDTVLLQLLS
Trigger: GCTTAGCAACTGTAGAAGCACAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATCCCTTACAATACCTGAGAGGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334267.11
CDS-3UTR CAA 90 bp GTCTTGGTTGCCCCCACATGGAACATCAATATTGGTAACCACACGATCCCTTTCAACGACCCACTGCCCTaGCAGTTTCCTGGCGAAGAG +
Preference number: 5 (lower is better)
Translates to: VLVAPTWNINIGNHTIPFNDPLP*QFPGEE
Trigger: CTCTTCGCCAGGAAACTGCAAGGGCAGTGGGTCGTT...GAAAGGGATCGTGTGGTTACCAATATTGATGTTCCATGTGGGGGCAACCAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS GCA 90 bp CAAGACCTCTCAGGTATTGTAAGGGATCTTCTGGGCCTTCCCACTTaGTCTGCCATGCGAGAGGACACTGGTTTAGTTTCTTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: QDLSGIVRDLLGLPT*SAMREDTGLVSSRD
Trigger: ATCTCTGGAAGAAACTAAACCAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATCCCTTACAATACCTGAGAGGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533197.1
CDS-3UTR CAA 90 bp AGCTTTATCTACCCAGTTCTGTATTGCAAGGGCACGGGCAACAAGACCTCTCAGCAGTATTGGAGATCCTaGTCGATCGTTAGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: SFIYPVLYCKGTGNKTSQQYWRS*SIVRRR
Trigger: CCTCCTCCTAACGATCGACAAGGATCTCCAATACTG...CTGAGAGGTCTTGTTGCCCGTGCCCTTGCAATACAGAACTGGGTAGATAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS GCA 90 bp GGAATACTGAATATTGGCTTTCACCCAGGCAGCCAAAGGTGCAGCTaGAGTACTGGCACGCTTAGCATTCTTTGGATCAAAAGAGCCTTT +
Preference number: 5 (lower is better)
Translates to: GILNIGFHPGSQRCS*STGTLSILWIKRAF
Trigger: AAAGGCTCTTTTGATCCAAAGAATGCTAAGCGTGCCAGTACTGCAGCTGCACCTTTGGCTGCCTGGGTGAAAGCCAATATTCAGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375735.7
ENST00000650373.2
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCGCAGAGCTTCGCGGTaGCCAGGGGTAGTCGCTATG +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICRRASR*PGVVAM
Trigger: CATAGCGACTACCCCTGGCAACCGCGAAGCTCTGCG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS CCA 90 bp GCCGTCATCCAAGAAGTTGTTGATTTCAAGACAGTTGCACAACAGTaGCTGATCCCAGAGTTCAGACATCAACCCGAAGTAATTCTGGGT +
Preference number: 5 (lower is better)
Translates to: AVIQEVVDFKTVAQQ*LIPEFRHQPEVILG
Trigger: ACCCAGAATTACTTCGGGTTGATGTCTGAACTCTGGGATCAGCCACTGTTGTGCAACTGTCTTGAAATCAACAACTTCTTGGATGACGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS-3UTR CAA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTATCTTTCCAGCGCTGTaGCTGCCGAAGCAGATCAAT +
Preference number: 5 (lower is better)
Translates to: VTSPCARLFKSLRSAALAIFPAL*LPKQIN
Trigger: ATTGATCTGCTTCGGCAGCAACAGCGCTGGAAAGAT...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTAGGTTCCCGAACCACTaGACGAGCACTATTTGTCAA +
Preference number: 5 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFRFPNH*TSTICQ
Trigger: TTGACAAATAGTGCTCGTCAAGTGGTTCGGGAACCT...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTGTCCTGGGGCTGCCCTaGCTCCTGAATTATGCCGAG +
Preference number: 5 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIVLGLP*LLNYAE
Trigger: CTCGGCATAATTCAGGAGCAAGGGCAGCCCCAGGAC...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GATCTTCTGGGCCTTCCCACTTGCTCTGCCATGCGAGAGGACACTTTTGGTTTATCTTTGTATAAACGTTaGAGATTTAGAGGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: DLLGLPTCSAMREDTFGLSLYKR*RFRGSG
Trigger: CCCACTGCCTCTAAATCTCAAACGTTTATACAAAGA...TAAACCAAAAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CAA 90 bp AACAGGCAAAGAGATGCACTCATCCGGAGAATATGGACCACATGCATCCTGTGGCCAAAGAAACTAGGTTaGTCGTCCTCTGGAATTTTC +
Preference number: 5 (lower is better)
Translates to: NRQRDALIRRIWTTCILWPKKLG*SSSGIF
Trigger: GAAAATTCCAGAGGACGACAAACCTAGTTTCTTTGG...CCACAGGATGCATGTGGTCCATATTCTCCGGATGAGTGCATCTCTTTGCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS CCA 90 bp AGCGATATTGGCAGGCAGACCAAAGAAACTAGGTTTGTCGTCCTCTaGAATTTTCTCAATGACAGCACGATAGTCCAAAATGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: SDIGRQTKETRFVVL*NFLNDSTIVQNAAG
Trigger: TCCTGCAGCATTTTGGACTATCGTGCTGTCATTGAGAAAATTCCAGAGGACGACAAACCTAGTTTCTTTGGTCTGCCTGCCAATATCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375735.7
ENST00000650373.2
CDS CCA 90 bp AGCGATATTGGCAGGCAGACCAAAGAAACTAGGTTTGTCGTCCTCTaGAATTTTCTCAATGACAGCACGATAGTCCTACCAAAATGCTGC +
Preference number: 5 (lower is better)
Translates to: SDIGRQTKETRFVVL*NFLNDSTIVLPKCC
Trigger: GCAGCATTTTGGTAGGACTATCGTGCTGTCATTGAGAAAATTCCAGAGGACGACAAACCTAGTTTCTTTGGTCTGCCTGCCAATATCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CAA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTACCTCTTCAAGGCGTTaGCCAAGTTTGTCAAGTGTT +
Preference number: 5 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFTSSRR*PSLSSV
Trigger: AACACTTGACAAACTTGGCAAACGCCTTGAAGAGGT...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTGGGAAGAGAGGAGCTTaGCTCAAACCCGTAGCCCGA +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICGKRGA*LKPVAR
Trigger: TCGGGCTACGGGTTTGAGCAAAGCTCCTCTCTTCCC...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp TGCCCTTGCAGTTTCCTGGCGAAGAGCATTAAGAAATGTGTCTGGATGGAAAAGAGTCTGTCAATAATGTaGTACCCAGCCCGAAGATCT +
Preference number: 5 (lower is better)
Translates to: CPCSFLAKSIKKCVWMEKSLSIM*YPARRS
Trigger: AGATCTTCGGGCTGGGTACAACATTATTGACAGACT...CTTTTCCATCCAGACACATTTCTTAATGCTCTTCGCCAGGAAACTGCAAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CAA 90 bp GTCTTGGTTGCCCCCACATGGAACATCAATATTGGTAACCACACGATCCCTTTCTCCCATTGTACATCTTaGGCACCATCAAAAAGTCTG +
Preference number: 5 (lower is better)
Translates to: VLVAPTWNINIGNHTIPFSHCTS*APSKSL
Trigger: CAGACTTTTTGATGGTGCCAAAGATGTACAATGGGA...GAAAGGGATCGTGTGGTTACCAATATTGATGTTCCATGTGGGGGCAACCAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CAA 90 bp GAGGCTACAAATTTAAGGCTATCCACAGAACGACCCACTGCCCTTGCAGTTTCCATGTACAAATTCCCATaGTACATCTTTGGCACCATC +
Preference number: 5 (lower is better)
Translates to: EATNLRLSTERPTALAVSMYKFP*YIFGTI
Trigger: GATGGTGCCAAAGATGTACAATGGGAATTTGTACAT...GGAAACTGCAAGGGCAGTGGGTCGTTCTGTGGATAGCCTTAAATTTGTAGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CAA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACACCAAACTCAATCGTGTaGGAAAAGGAGATTCCTGCG +
Preference number: 5 (lower is better)
Translates to: SSRSKTTCCASIPASCSTPNSIV*EKEIPA
Trigger: CGCAGGAATCTCCTTTTCCAACACGATTGAGTTTGG...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp TTTTGTACTTCTGAACTCAGTAAAGTAGTTCCTCTGATGACTTTGCTGAGAGCACTACCCAGTTCTGTATaGCAAGGGCACGGGCAACAA +
Preference number: 5 (lower is better)
Translates to: FCTSELSKVVPLMTLLRALPSSV*QGHGQQ
Trigger: TTGTTGCCCGTGCCCTTGCAATACAGAACTGGGTAG...TGCTCTCAGCAAAGTCATCAGAGGAACTACTTTACTGAGTTCAGAAGTACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CAA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTAGCGTGTCTGTTCTTTaGGCAATGCTCCACGGCCGA +
Preference number: 5 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLISVSVL*AMLHGR
Trigger: TCGGCCGTGGAGCATTGCCAAAAGAACAGACACGCT...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCATGGGTCAACTGCACCTaGAGAACTTCGCCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSWVNCT*RTSPSS
Trigger: ACTACTGGGCGAAGTTCTCAAGGTGCAGTTGACCCA...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTACCCCAATCATAATGTaGCTGAGGTGTCAAAAGTTC +
Preference number: 5 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFTPIIM*LRCQKF
Trigger: GAACTTTTGACACCTCAGCAACATTATGATTGGGGT...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTCTGAGCAGCATCCCTTaGCCACATCCTTCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLILSSIP*PHPSGP
Trigger: AGGACCAGAAGGATGTGGCAAAGGGATGCTGCTCAG...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp ACTGCCCTTGCAGTTTCCTGGCGAAGAGCATTAAGAAATGTGTCTGGATGGAAAAGTTTCTTCCAGAGATaGAGGACAGGAGAAAGTTCA +
Preference number: 5 (lower is better)
Translates to: TALAVSWRRALRNVSGWKSFFQR*RTGESS
Trigger: TGAACTTTCTCCTGTCCTCAATCTCTGGAAGAAACT...TTTCCATCCAGACACATTTCTTAATGCTCTTCGCCAGGAAACTGCAAGGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CAA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTTCATCCAAGAAGTTGTaGATTTCAAGACAGTTGCAC +
Preference number: 5 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFSSKKL*ISRQLH
Trigger: GTGCAACTGTCTTGAAATCAACAACTTCTTGGATGA...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCTGAGGAGCATCTGGTaGCCGTCATCCAAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICLRSIW*PSSKKL
Trigger: CAACTTCTTGGATGACGGCAACCAGATGCTCCTCAG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTCCAGCACTTTATCTTTaGTGTCACCAAACTCAATCG +
Preference number: 5 (lower is better)
Translates to: VTSPCARLFKSLRSAALAPALYL*CHQTQS
Trigger: CGATTGAGTTTGGTGACACAAAAGATAAAGTGCTGG...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAACTTCAGGTCGCAGCTaGAAAAACACCAGCACTTTA +
Preference number: 5 (lower is better)
Translates to: SSRSKTTCCASIPASCSTTSGRS*KNTSTL
Trigger: TAAAGTGCTGGTGTTTTTCAAGCTGCGACCTGAAGT...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTGATCCTTTAACAACATaGGTGCGAATACTTGCCGTA +
Preference number: 5 (lower is better)
Translates to: VTSPCARLFKSLRSAALADPLTT*VRILAV
Trigger: TACGGCAAGTATTCGCACCAATGTTGTTAAAGGATC...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTATATTTCAGGAATGCTaGAAGAAGCTGCTGTGGACT +
Preference number: 5 (lower is better)
Translates to: VTSPCARLFKSLRSAALAIFQEC*KKLLWT
Trigger: AGTCCACAGCAGCTTCTTCAAGCATTCCTGAAATAT...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GAGATTGAGGACAGGAGAAAGTTCATTAGACCAGATTTCTCTATCAAATTTGGAATCCACTGGTCTTGGTaGCCCCCACATGGAACATCA +
Preference number: 5 (lower is better)
Translates to: EIEDRRKFIRPDFSIKFGIHWSW*PPHGTS
Trigger: TGATGTTCCATGTGGGGGCAACCAAGACCAGTGGAT...TCCAAATTTGATAGAGAAATCTGGTCTAATGAACTTTCTCCTGTCCTCAATCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CAA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTTTTAAACAATCTACCTaGACAGCACTTGGAAGTCGT +
Preference number: 5 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFFKQST*TALGSR
Trigger: ACGACTTCCAAGTGCTGTCAAGGTAGATTGTTTAAA...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTATTAAGCCTCAGTGCTaGTACCACAATATGACTTTC +
Preference number: 5 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFIKPQC*YHNMTF
Trigger: GAAAGTCATATTGTGGTACAAGCACTGAGGCTTAAT...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAACATTCTCCAAAGCGTaGATTTTCCAGCACCACTTG +
Preference number: 5 (lower is better)
Translates to: SSRSKTTCCASIPASCSTTFSKA*IFQHHL
Trigger: CAAGTGGTGCTGGAAAATCAACGCTTTGGAGAATGT...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAATGTCGAGAAGTGGTTaGTGCACTACAGTGAACTGT +
Preference number: 5 (lower is better)
Translates to: SSRSKTTCCASIPASCSTMSRSG*CTTVNC
Trigger: ACAGTTCACTGTAGTGCACAAACCACTTCTCGACAT...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTTTTGCACCAACAATTTaGTCACGAAATAAGCGCCGT +
Preference number: 5 (lower is better)
Translates to: VTSPCARLFKSLRSAALAFAPTI*SRNKRR
Trigger: ACGGCGCTTATTTCGTGACAAAATTGTTGGTGCAAA...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTTTCAATTCCTGCAAGTaGCAGCACATGTTTGAGATC +
Preference number: 5 (lower is better)
Translates to: VTSPCARLFKSLRSAALAFNSCK*QHMFEI
Trigger: GATCTCAAACATGTGCTGCAACTTGCAGGAATTGAA...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp TTTTGTACTTCTGAACTCAGTAAAGTAGTTCCTCTGATGACTTTGCTGAGAGCAGAGCAATCTTTAATGTaGCCACGGCCCAGCTTCGTT +
Preference number: 5 (lower is better)
Translates to: FCTSELSKVVPLMTLLRAEQSLM*PRPSFV
Trigger: AACGAAGCTGGGCCGTGGCAACATTAAAGATTGCTC...TGCTCTCAGCAAAGTCATCAGAGGAACTACTTTACTGAGTTCAGAAGTACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CAA 90 bp TTTTGTACTTCTGAACTCAGTAAAGTAGTTCCTCTGATGACTTTGCTGAGAGCAGATGAGCGAGCGATATaGGCAGGCAGACCAAAGAAA +
Preference number: 5 (lower is better)
Translates to: FCTSELSKVVPLMTLLRADERAI*AGRPKK
Trigger: TTTCTTTGGTCTGCCTGCCAATATCGCTCGCTCATC...TGCTCTCAGCAAAGTCATCAGAGGAACTACTTTACTGAGTTCAGAAGTACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS GCA 90 bp AATGTTTGCAACTTGCTGTATTTTGGCAGGAATAACAAAGCCAAGTaGAGAGAGCTGACGAACTTCTCTCAGAAGAATCACCAAACGATC +
Preference number: 5 (lower is better)
Translates to: NVCNLLYFGRNNKAK*RELTNFSQKNHQTI
Trigger: GATCGTTTGGTGATTCTTCTGAGAGAAGTTCGTCAGCTCTCTGCACTTGGCTTTGTTATTCCTGCCAAAATACAGCAAGTTGCAAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS GCA 90 bp GCTAAGCCAGTTCTCAATTCTTGTAATCCATCTTTCCAGCGCTGTTaGTGCCGAAGCAGATCAATATTCATAAGAACAACCACCTTTTCA +
Preference number: 5 (lower is better)
Translates to: AKPVLNSCNPSFQRC*CRSRSIFIRTTTFS
Trigger: TGAAAAGGTGGTTGTTCTTATGAATATTGATCTGCTTCGGCAGCAACAGCGCTGGAAAGATGGATTACAAGAATTGAGAACTGGCTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS GCA 90 bp AAACTTTGTCCAACCCTGAGGAATATAGTTTCTTCTTTCTTGACATaGAGCATGAAACCATGCAAGACTGAAGAGAGCATGAGCTCGATG +
Preference number: 5 (lower is better)
Translates to: KLCPTLRNIVSSFLT*SMKPCKTEESMSSM
Trigger: CATCGAGCTCATGCTCTCTTCAGTCTTGCATGGTTTCATGCTGCATGTCAAGAAAGAAGAAACTATATTCCTCAGGGTTGGACAAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375735.7
ENST00000528670.5
ENST00000650373.2
CDS-3UTR CAA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTACATTGGTGCGAATACTaGCCGTACTGCTTGGTAAAG +
Preference number: 5 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALHWCEY*PYCLVK
Trigger: CTTTACCAAGCAGTACGGCAAGTATTCGCACCAATG...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTATGATCATGTTCTGTTaGTCTCCACACATCATCTAC +
Preference number: 5 (lower is better)
Translates to: VTSPCARLFKSLRSAALAMIMFC*SPHIIY
Trigger: GTAGATGATGTGTGGAGACAAACAGAACATGATCAT...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAGCAACTTGCTGTATTTaGGCAGGAATAACAAAGCCA +
Preference number: 5 (lower is better)
Translates to: SSRSKTTCCASIPASCSTATCCI*AGITKP
Trigger: TGGCTTTGTTATTCCTGCCAAAATACAGCAAGTTGC...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTTGCAATGTTTGCAACTaGCTGTATTTTGGCAGGAAT +
Preference number: 5 (lower is better)
Translates to: VTSPCARLFKSLRSAALACNVCN*LYFGRN
Trigger: ATTCCTGCCAAAATACAGCAAGTTGCAAACATTGCA...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp TGTTCTTTTGGCAATGCTCCACGGCCGAAAATGGGTTCCAAATACACCCACTTTCATTGGCCTCTGACTTaGAATCATTTGTTGATCAAT +
Preference number: 5 (lower is better)
Translates to: CSFGNAPRPKMGSKYTHFHWPLT*NHLLIN
Trigger: ATTGATCAACAAATGATTCAAAGTCAGAGGCCAATG...AAAGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTATCTTTCCAGCGCTGTaGCTGCCGAAGCAGATCAAT +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICIFPAL*LPKQIN
Trigger: ATTGATCTGCTTCGGCAGCAACAGCGCTGGAAAGAT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp ACATGGAACATCAATATTGGTAACCACACGATCCCTTTCAGCACTTGTGTAAACGATCCCTTTCAGCACTaGTGTAAACAGGCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: TWNINIGNHTIPFSTCVNDPFQH*CKQAKR
Trigger: TCTCTTTGCCTGTTTACACAAGTGCTGAAAGGGATC...GTTTACACAAGTGCTGAAAGGGATCGTGTGGTTACCAATATTGATGTTCCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CAA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACATGTGTAGTGCCACTTTaGTTTAGCTGTCTAAGGAGA +
Preference number: 5 (lower is better)
Translates to: SSRSKTTCCASIPASCSTCVVPL*FSCLRR
Trigger: TCTCCTTAGACAGCTAAACAAAAGTGGCACTACACA...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCATTCTTCATACTGCTATaGGACCAACCCTCCATCCAC +
Preference number: 5 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSFFILL*DQPSIH
Trigger: GTGGATGGAGGGTTGGTCCAATAGCAGTATGAAGAA...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS GCA 90 bp AAGCCAGTTCTCAATTCTTGTAATCCATCTTTCCAGCGCTGTTGCTaGCGAAGCAGATCAATATTCATAAGAACAACCACCTTTTCACAA +
Preference number: 5 (lower is better)
Translates to: KPVLNSCNPSFQRCC*RSRSIFIRTTTFSQ
Trigger: TTGTGAAAAGGTGGTTGTTCTTATGAATATTGATCTGCTTCGGCAGCAACAGCGCTGGAAAGATGGATTACAAGAATTGAGAACTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCCAAACTCAATCGTGTaGGAAAAGGAGATTCCTGCG +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICPNSIV*EKEIPA
Trigger: CGCAGGAATCTCCTTTTCCAACACGATTGAGTTTGG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCATTGGTGCGAATACTaGCCGTACTGCTTGGTAAAG +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICHWCEY*PYCLVK
Trigger: CTTTACCAAGCAGTACGGCAAGTATTCGCACCAATG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp TGGCCTCTTCAAAGACCTGCTTTAATGCAGCACTTAGTTCATCATATTCCACTTCCCACTGTTCACAAATaGAAATACCAGCTTTCAGAC +
Preference number: 5 (lower is better)
Translates to: WPLQRPALMQHLVHHIPLPTVHK*KYQLSD
Trigger: GTCTGAAAGCTGGTATTTCAATTTGTGAACAGTGGG...AAGTGGAATATGATGAACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GTAACTTCACCTTGTGCCCGACTATTTAAATCTTTAAGGTCGGCAGCTTTGGCTTTTTCCTGCTATTTTTaGTTCCGCAGGTGCAATAAT +
Preference number: 5 (lower is better)
Translates to: VTSPCARLFKSLRSAALAFSCYF*FRRCNN
Trigger: ATTATTGCACCTGCGGAACAAAAAATAGCAGGAAAA...AGCCAAAGCTGCCGACCTTAAAGATTTAAATAGTCGGGCACAAGGTGAAGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACACAGATTGTAACATCATaGGCCTCTGACTTTGAATCA +
Preference number: 5 (lower is better)
Translates to: SSRSKTTCCASIPASCSTQIVTS*ASDFES
Trigger: TGATTCAAAGTCAGAGGCCAATGATGTTACAATCTG...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTACCGTTCAGCAGCATTTaGGAGTTTTTGGATATAGCC +
Preference number: 5 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALPFSSI*EFLDIA
Trigger: GGCTATATCCAAAAACTCCAAAATGCTGCTGAACGG...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTATGCATGTCACTTGCTaGGAATCCCTGTGCTTCTAC +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICMHVTC*ESLCFY
Trigger: GTAGAAGCACAGGGATTCCAAGCAAGTGACATGCAT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTATGCATGCATGTCACTaGCTTGGAATCCCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICMHACH*LGIPVL
Trigger: AAGCACAGGGATTCCAAGCAAGTGACATGCATGCAT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAATAAAAGGCCCAAATTaGGGCACAGCTCTCGATATC +
Preference number: 5 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRIKGPN*GTALDI
Trigger: GATATCGAGAGCTGTGCCCAAATTTGGGCCTTTTAT...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCATTAAGGTCGGCAGCTTaGGCTACAATTGTATCAGCT +
Preference number: 5 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSLRSAA*ATIVSA
Trigger: AGCTGATACAATTGTAGCCAAAGCTGCCGACCTTAA...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCACATCAGACCATTCTCTaGTGTCCATGTCAATATGGC +
Preference number: 5 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSHQTIL*CPCQYG
Trigger: GCCATATTGACATGGACACAAGAGAATGGTCTGATG...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTACTTGACGAGCACTATTaGTCAAAACACCATCAGACC +
Preference number: 5 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALLDEHY*SKHHQT
Trigger: GGTCTGATGGTGTTTTGACAAATAGTGCTCGTCAAG...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAGTCTTTCACAGTCTTTaGGTCTGTATACACGACCAG +
Preference number: 5 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRVFHSL*VCIHDQ
Trigger: CTGGTCGTGTATACAGACCAAAAGACTGTGAAAGAC...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS TCA 90 bp TCCTGTTCATATAGTTTAAGCTGGTCTAAGAGATCTTTGGCACTTTaGTGGAAACATCGAAATCCTGGCAAGTCAGATAAAAGAGCCTCT +
Preference number: 5 (lower is better)
Translates to: SCSYSLSWSKRSLAL*WKHRNPGKSDKRAS
Trigger: AGAGGCTCTTTTATCTGACTTGCCAGGATTTCGATGTTTCCATCAAAGTGCCAAAGATCTCTTAGACCAGCTTAAACTATATGAACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS CCA 90 bp TCTAAACGTGAGTCTTTCAAATGTGTTTTTAACCACTCTGTAGCTTaGGAAGAAGGATCTATAAGAAATGGGCACACTCGACTCCATGAT +
Preference number: 5 (lower is better)
Translates to: SKRESFKCVFNHSVA*EEGSIRNGHTRLHD
Trigger: ATCATGGAGTCGAGTGTGCCCATTTCTTATAGATCCTTCTTCCCAAGCTACAGAGTGGTTAAAAACACATTTGAAAGACTCACGTTTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650373.2
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTACTTCAGGTCGCAGCTaGAAAAACACCAGCACTTTA +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICTSGRS*KNTSTL
Trigger: TAAAGTGCTGGTGTTTTTCAAGCTGCGACCTGAAGT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCATACTTGCCGTACTGCTaGGTAAAGAGAACTAATAGG +
Preference number: 5 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSYLPYC*VKRTNR
Trigger: CCTATTAGTTCTCTTTACCAAGCAGTACGGCAAGTA...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTAATTTCCACGGTGAGCTaGTTCTATCCAAAACTGGAA +
Preference number: 5 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALISTVS*FYPKLE
Trigger: TTCCAGTTTTGGATAGAACAAGCTCACCGTGGAAAT...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTACCTCTTCAAGGCGTTaGCCAAGTTTGTCAAGTGTT +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICTSSRR*PSLSSV
Trigger: AACACTTGACAAACTTGGCAAACGCCTTGAAGAGGT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp TGGCCTCTTCAAAGACCTGCTTTAATGCAGCACTTAGTTCATCATATTCCACTTAGTATATGGATTATATaGCACAGGATTCAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: WPLQRPALMQHLVHHIPLSIWII*HRIQAS
Trigger: ACTGGCCTGAATCCTGTGCAATATAATCCATATACT...AAGTGGAATATGATGAACTAAGTGCTGCATTAAAGCAGGTCTTTGAAGAGGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCAAGAGCCTCTGCAATCTaGATAGTATCATCTACCTTC +
Preference number: 5 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSRASAI*IVSSTF
Trigger: GAAGGTAGATGATACTATCAAGATTGCAGAGGCTCT...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAGAGATCTTTGGCACTTaGATGGAAACATCGAAATCC +
Preference number: 5 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMREIFGT*METSKS
Trigger: GGATTTCGATGTTTCCATCAAAGTGCCAAAGATCTC...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCCGTTCAGCAGCATTTaGGAGTTTTTGGATATAGCC +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICPFSSI*EFLDIA
Trigger: GGCTATATCCAAAAACTCCAAAATGCTGCTGAACGG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp AGTTCTGATAGGTCAAGTGTTTCAGAGAGAAGAGCCTGTTTTTCAGCTTTATCTCATGGAACATCAATATaGGTAACCACACGATCCCTT +
Preference number: 5 (lower is better)
Translates to: SSDRSSVSERRACFSALSHGTSI*VTTRSL
Trigger: AAGGGATCGTGTGGTTACCAATATTGATGTTCCATG...AGATAAAGCTGAAAAACAGGCTCTTCTCTCTGAAACACTTGACCTATCAGAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTATAAAAGGCCCAAATTaGGGCACAGCTCTCGATATC +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICIKGPN*GTALDI
Trigger: GATATCGAGAGCTGTGCCCAAATTTGGGCCTTTTAT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTTAAGGTCGGCAGCTTaGGCTACAATTGTATCAGCT +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICLRSAA*ATIVSA
Trigger: AGCTGATACAATTGTAGCCAAAGCTGCCGACCTTAA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTCAAATATTCGTCCCATaGACTTCACATCGATGCCCT +
Preference number: 5 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIQIFVP*TSHRCP
Trigger: AGGGCATCGATGTGAAGTCAATGGGACGAATATTTG...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGATTTACTTCTACCTCCTaGCCAAGCAGTTCACATACA +
Preference number: 5 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRFTSTS*PSSSHT
Trigger: TGTATGTGAACTGCTTGGCAAGGAGGTAGAAGTAAA...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp TCCTCAAGAAGTAAAACTACCTGTTGTGCTTCAATTCCTGCAAGTTGCAGCACAGGGATTCATAGTATATaGTTTCACTACTTTGCCAGT +
Preference number: 5 (lower is better)
Translates to: SSRSKTTCCASIPASCSTGIHSI*FHYFAS
Trigger: ACTGGCAAAGTAGTGAAACAATATACTATGAATCCC...TGTGCTGCAACTTGCAGGAATTGAAGCACAACAGGTAGTTTTACTTCTTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGATCATCAACTGTAAATTaGGCTCGCACCTGTTCATAC +
Preference number: 5 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRSSTVN*ARTCSY
Trigger: GTATGAACAGGTGCGAGCCAAATTTACAGTTGATGA...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS TCA 90 bp GATTCAGGAGCAGCAGAAAGATATGTAATAAATGCAGCAGCAAGTTaGGCTCTTTTAGGAAGAGTAGCTAATTCCTCTGTTATCTCTACA +
Preference number: 5 (lower is better)
Translates to: DSGAAERYVINAAAS*ALLGRVANSSVIST
Trigger: TGTAGAGATAACAGAGGAATTAGCTACTCTTCCTAAAAGAGCTCAACTTGCTGCTGCATTTATTACATATCTTTCTGCTGCTCCTGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375735.7
ENST00000650373.2
CDS CCA 90 bp TCTAAACGTGAGTCTTTCAAATGTGTTTTTAACCACTCTGTAGCTTaGGAAGAAGGATCTATAAGAAATGGGCACACTCGACTCTGTAAT +
Preference number: 5 (lower is better)
Translates to: SKRESFKCVFNHSVA*EEGSIRNGHTRLCN
Trigger: ATTACAGAGTCGAGTGTGCCCATTTCTTATAGATCCTTCTTCCCAAGCTACAGAGTGGTTAAAAACACATTTGAAAGACTCACGTTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375735.7
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCCGTCATCCAAGAAGTaGTTGATTTCAAGACAGTTG +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICPSSKK*LISRQL
Trigger: CAACTGTCTTGAAATCAACAACTTCTTGGATGACGG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTCCGTCATCCAAGAAGTaGTTGATTTCAAGACAGTTG +
Preference number: 5 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIPSSKK*LISRQL
Trigger: CAACTGTCTTGAAATCAACAACTTCTTGGATGACGG...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCCAGCACTTTATCTTTaGTGTCACCAAACTCAATCG +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICPALYL*CHQTQS
Trigger: CGATTGAGTTTGGTGACACAAAAGATAAAGTGCTGG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTACTTGCCGTACTGCTaGGTAAAGAGAACTAATAGG +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICYLPYC*VKRTNR
Trigger: CCTATTAGTTCTCTTTACCAAGCAGTACGGCAAGTA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTGATCCTTTAACAACATaGGTGCGAATACTTGCCGTA +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICDPLTT*VRILAV
Trigger: TACGGCAAGTATTCGCACCAATGTTGTTAAAGGATC...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTATTTCCACGGTGAGCTaGTTCTATCCAAAACTGGAA +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICISTVS*FYPKLE
Trigger: TTCCAGTTTTGGATAGAACAAGCTCACCGTGGAAAT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCCCACTGTTCACAAATaGAAATACCAGCTTTCAGAC +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICPTVHK*KYQLSD
Trigger: GTCTGAAAGCTGGTATTTCAATTTGTGAACAGTGGG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTAGGCGTTTGCCAAGTTaGTCAAGTGTTTCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICRRLPS*SSVSGK
Trigger: TTTTCCAGAAACACTTGACAAACTTGGCAAACGCCT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTAGGCGTTTGCCAAGTTaGTCAAGTGTTTCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIRRLPS*SSVSGK
Trigger: TTTTCCAGAAACACTTGACAAACTTGGCAAACGCCT...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTATATTTCAGGAATGCTaGAAGAAGCTGCTGTGGACT +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICIFQEC*KKLLWT
Trigger: AGTCCACAGCAGCTTCTTCAAGCATTCCTGAAATAT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCATTGAGTCCACAAGTCTaGCCAGTAAAGTTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSLSPQV*PVKFLF
Trigger: AAAGAGAAACTTTACTGGCAAGACTTGTGGACTCAA...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTAGAGCCTCTGCAATCTaGATAGTATCATCTACCTTC +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICRASAI*IVSSTF
Trigger: GAAGGTAGATGATACTATCAAGATTGCAGAGGCTCT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTGAGATCTTTGGCACTTaGATGGAAACATCGAAATCC +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICEIFGT*METSKS
Trigger: GGATTTCGATGTTTCCATCAAAGTGCCAAAGATCTC...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTGCAACTTGCTGTATTTaGGCAGGAATAACAAAGCCA +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICATCCI*AGITKP
Trigger: TGGCTTTGTTATTCCTGCCAAAATACAGCAAGTTGC...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTAAGCCCAGTCTTCAGTaGTATGAACCTGAATTTGGT +
Preference number: 5 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIKPSLQ*YEPEFG
Trigger: ACCAAATTCAGGTTCATACAACTGAAGACTGGGCTT...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTCAGTCCCAACCAAACTaGTTTCTACCACATAGTCAT +
Preference number: 5 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIQSQPN*FLPHSH
Trigger: ATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTG...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGATCGTCAAAAATCCACTaGCATTTCTGTGCTTCTACA +
Preference number: 5 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRSSKIH*HFCAST
Trigger: TGTAGAAGCACAGAAATGCAAGTGGATTTTTGACGA...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS TCA 90 bp CTAGCCTCAATACACAAACCAGATCTGGAATCAGATAAACCTGATTaGATATCCCTGGACCAATCATCAAATTGTTCCTGTTCATATAGT +
Preference number: 5 (lower is better)
Translates to: LASIHKPDLESDKPD*ISLDQSSNCSCSYS
Trigger: ACTATATGAACAGGAACAATTTGATGATTGGTCCAGGGATATTCAATCAGGTTTATCTGATTCCAGATCTGGTTTGTGTATTGAGGCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS TCA 90 bp GGAAACTTTCTTTGCAAGGATAGATGGAAACTCTTGCTCACACATTaGATTATTATAATAAGTACGCCACAGAGCTGCATCTTCAAAGCA +
Preference number: 5 (lower is better)
Translates to: GNFLCKDRWKLLLTH*IIIISTPQSCIFKA
Trigger: TGCTTTGAAGATGCAGCTCTGTGGCGTACTTATTATAATAATTCAATGTGTGAGCAAGAGTTTCCATCTATCCTTGCAAAGAAAGTTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375735.7
ENST00000525306.1
ENST00000528670.5
ENST00000650373.2
CDS GCA 90 bp ATGTGCCACTTGTTTAAGAATAATTGCTTGCTTGCAGAATTTCTGTaGAATGTTTGCAACTTGCTGTATTTTGGCAGGAATAACAAAGCC +
Preference number: 5 (lower is better)
Translates to: MCHLFKNNCLLAEFL*NVCNLLYFGRNNKA
Trigger: GGCTTTGTTATTCCTGCCAAAATACAGCAAGTTGCAAACATTGCACAGAAATTCTGCAAGCAAGCAATTATTCTTAAACAAGTGGCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTCATCCAAGAAGTTGTaGATTTCAAGACAGTTGCAC +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICSSKKL*ISRQLH
Trigger: GTGCAACTGTCTTGAAATCAACAACTTCTTGGATGA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTATGATCATGTTCTGTTaGTCTCCACACATCATCTAC +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICMIMFC*SPHIIY
Trigger: GTAGATGATGTGTGGAGACAAACAGAACATGATCAT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTAGTATATGGATTATATaGCACAGGATTCAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICSIWII*HRIQAS
Trigger: ACTGGCCTGAATCCTGTGCAATATAATCCATATACT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GTAAATTCCAAACGTGACTTCATATTCAGATTTCCACCAAGTCCCCTTATGAGAAATAATCTTTTCATATaGAGACACCGCAGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: VNSKRDFIFRFPPSPLMRNNLFI*RHRSFP
Trigger: TGGAAAGCTGCGGTGTCTCAATATGAAAAGATTATT...TCTCATAAGGGGACTTGGTGGAAATCTGAATATGAAGTCACGTTTGGAATTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTTGAGTCCACAAGTCTaGCCAGTAAAGTTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICLSPQV*PVKFLF
Trigger: AAAGAGAAACTTTACTGGCAAGACTTGTGGACTCAA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTACTTCTGAAAGATTTTaGCCAGAAAGTGGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICTSERF*PESGPD
Trigger: ATCTGGACCACTTTCTGGCAAAAATCTTTCAGAAGT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTACTTCTGAAAGATTTTaGCCAGAAAGTGGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLITSERF*PESGPD
Trigger: ATCTGGACCACTTTCTGGCAAAAATCTTTCAGAAGT...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTGCAATGTTTGCAACTaGCTGTATTTTGGCAGGAAT +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICCNVCN*LYFGRN
Trigger: ATTCCTGCCAAAATACAGCAAGTTGCAAACATTGCA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp ATTCCTGCAAGTTGCAGCACATGTTTGAGATCATTTTTGAACTGCTTCAGTTCAAGAATAATTGCTTGCTaGCAGAATTTCTGTGCAATG +
Preference number: 5 (lower is better)
Translates to: IPASCSTCLRSFLNCFSSRIIAC*QNFCAM
Trigger: CATTGCACAGAAATTCTGCAAGCAAGCAATTATTCT...TGAACTGAAGCAGTTCAAAAATGATCTCAAACATGTGCTGCAACTTGCAGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCAGATTGTAACATCATaGGCCTCTGACTTTGAATCA +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICQIVTS*ASDFES
Trigger: TGATTCAAAGTCAGAGGCCAATGATGTTACAATCTG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCAGAGCTTTGTACAGTaGATGATTCCAGTGTTGTTT +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICQSFVQ*MIPVLF
Trigger: AAACAACACTGGAATCATCAACTGTACAAAGCTCTG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTTTAAACAATCTACCTaGACAGCACTTGGAAGTCGT +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICFKQST*TALGSR
Trigger: ACGACTTCCAAGTGCTGTCAAGGTAGATTGTTTAAA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTATTCCTGAAATCCTTGTaGAAACTCTTCATAAAAGGC +
Preference number: 5 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALFLKSL*KLFIKG
Trigger: GCCTTTTATGAAGAGTTTCAACAAGGATTTCAGGAA...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp CATTCATCACAGTCCCAACCAAACTTGTTTCTACCACATAGTCATTCTGCTTTATATCGAGGCATAGCTTaGGGATTCATAGTATATTGT +
Preference number: 5 (lower is better)
Translates to: HSSQSQPNLFLPHSHSALYRGIA*GFIVYC
Trigger: ACAATATACTATGAATCCCAAAGCTATGCCTCGATA...TAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTAGAGTCCTTATAATTTaGAACGGCCAGAATGCAACA +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICRVLII*NGQNAT
Trigger: TGTTGCATTCTGGCCGTTCAAAATTATAAGGACTCT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTAATAATCTTTTCATATaGAGACACCGCAGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICNNLFI*RHRSFP
Trigger: TGGAAAGCTGCGGTGTCTCAATATGAAAAGATTATT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTTTTCCTGCTATTTTTaGTTCCGCAGGTGCAATAAT +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICFSCYF*FRRCNN
Trigger: ATTATTGCACCTGCGGAACAAAAAATAGCAGGAAAA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTAGAATAATTGCTTGCTaGCAGAATTTCTGTGCAATG +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICRIIAC*QNFCAM
Trigger: CATTGCACAGAAATTCTGCAAGCAAGCAATTATTCT...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTCATTGGCCTCTGACTTaGAATCATTTGTTGATCAAT +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICHWPLT*NHLLIN
Trigger: ATTGATCAACAAATGATTCAAAGTCAGAGGCCAATG...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp GCTTTTCTAAAAGTGATTAGCAAACTGATTCTTGGCTTAGCTCTCTGGATTTGTTTCCTGAAATCCTTGTaGAAACTCTTCATAAAAGGC +
Preference number: 5 (lower is better)
Translates to: AFLKVISKLILGLALWICFLKSL*KLFIKG
Trigger: GCCTTTTATGAAGAGTTTCAACAAGGATTTCAGGAA...ACAAATCCAGAGAGCTAAGCCAAGAATCAGTTTGCTAATCACTTTTAGAAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS-3UTR CAA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTCTTCATAGTTCGACTTaGGCTGTCTTCATAATCAAT +
Preference number: 5 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLILHSST*AVFIIN
Trigger: ATTGATTATGAAGACAGCCAAAGTCGAACTATGAAG...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTTATTGTTTCACTACTTaGCCAGTTTTACAAAGCGCA +
Preference number: 5 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIYCFTT*PVLQSA
Trigger: TGCGCTTTGTAAAACTGGCAAAGTAGTGAAACAATA...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS-3UTR CAA 90 bp ACAAGTCTTTCACAGTCTTTTGGTCTGTATACACGACCAGTATTAGTACTGATTAAACTATCTGACATATaGTCTAATATGTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: TSLSQSFGLYTRPVLVLIKLSDI*SNMSEP
Trigger: GGGCTCAGACATATTAGACAATATGTCAGATAGTTT...AATCAGTACTAATACTGGTCGTGTATACAGACCAAAAGACTGTGAAAGACTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649323.1
CDS CAA 72 bp CCCGTAGCCCGACCGCGGGACCGCAGAGCTTCGCGGTaGCCAGGGGTAGTCGCTATGGCGACGGAGCACTAC +
Preference number: 6 (lower is better)
Translates to: PVARPRDRRASR*PGVVAMATEHY
Trigger: GTAGTGCTCCGTCGCCATAGCGACTACCCCTGGCAACCGCGAAGCTCTGCGGTCCCGCGGTCGGGCTACGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS GCA 72 bp ATCGTGTTGGAAAAGGAGATTCCTGCGTCGGATCGCTaGACCCTGAGGAGCATCTGGTTGCCGTCATCCAAG +
Preference number: 6 (lower is better)
Translates to: IVLEKEIPASDR*TLRSIWLPSSK
Trigger: CTTGGATGACGGCAACCAGATGCTCCTCAGGGTGCAGCGATCCGACGCAGGAATCTCCTTTTCCAACACGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS TCA 72 bp TGGAAAAGGAGATTCCTGCGTCGGATCGCTGCACCCTaGGGAGCATCTGGTTGCCGTCATCCAAGAAGTTGT +
Preference number: 6 (lower is better)
Translates to: WKRRFLRRIAAP*GASGCRHPRSC
Trigger: ACAACTTCTTGGATGACGGCAACCAGATGCTCCTCAGGGTGCAGCGATCCGACGCAGGAATCTCCTTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS GCA 72 bp GTCACCAAACTCAATCGTGTTGGAAAAGGAGATTCCTaGGTCGGATCGCTGCACCCTGAGGAGCATCTGGTT +
Preference number: 6 (lower is better)
Translates to: VTKLNRVGKGDS*VGSLHPEEHLV
Trigger: AACCAGATGCTCCTCAGGGTGCAGCGATCCGACGCAGGAATCTCCTTTTCCAACACGATTGAGTTTGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS GCA 72 bp TCAGGTATTGTAAGGGATCTTCTGGGCCTTCCCACTTaGTCTGCCATGCGAGAGGACACTGTGCTTCTACAG +
Preference number: 6 (lower is better)
Translates to: SGIVRDLLGLPT*SAMREDTVLLQ
Trigger: CTGTAGAAGCACAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATCCCTTACAATACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334267.11
CDS CAA 90 bp AAGGAGATTCCTGCGTCGGATCGCTGCACCCTGAGGAGCATCTGGTaGCCGTCATCCAAGAAGTTGTTGATTTCAAGACAGTTGCACAAC +
Preference number: 6 (lower is better)
Translates to: KEIPASDRCTLRSIW*PSSKKLLISRQLHN
Trigger: GTTGTGCAACTGTCTTGAAATCAACAACTTCTTGGATGACGGCAACCAGATGCTCCTCAGGGTGCAGCGATCCGACGCAGGAATCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS CAA 90 bp ACAAGACCTCTCAGGTATTGTAAGGGATCTTCTGGGCCTTCCCACTaGCTCTGCCATGCGAGAGGACACTGTGCTTCTACAGTTGCTAAG +
Preference number: 6 (lower is better)
Translates to: TRPLRYCKGSSGPSH*LCHARGHCASTVAK
Trigger: CTTAGCAACTGTAGAAGCACAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATCCCTTACAATACCTGAGAGGTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334267.11
CDS GCA 72 bp TATTGTAAGGGATCTTCTGGGCCTTCCCACTTGCTCTaGCATGCGAGAGGACACTGTGCTTCTACAGTTGCT +
Preference number: 6 (lower is better)
Translates to: YCKGSSGPSHLL*HARGHCASTVA
Trigger: AGCAACTGTAGAAGCACAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATCCCTTACAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334267.11
CDS CAA 90 bp ACAAGACCTCTCAGGTATTGTAAGGGATCTTCTGGGCCTTCCCACTaGCTCTGCCATGCGAGAGGACACTGGTTTAGTTTCTTCCAGAGA +
Preference number: 6 (lower is better)
Translates to: TRPLRYCKGSSGPSH*LCHARGHWFSFFQR
Trigger: TCTCTGGAAGAAACTAAACCAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATCCCTTACAATACCTGAGAGGTCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533197.1
CDS GCA 72 bp TATTGTAAGGGATCTTCTGGGCCTTCCCACTTGCTCTaGCATGCGAGAGGACACTGGTTTAGTTTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: YCKGSSGPSHLL*HARGHWFSFFQ
Trigger: CTGGAAGAAACTAAACCAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATCCCTTACAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533197.1
CDS GCA 72 bp TCAGGTATTGTAAGGGATCTTCTGGGCCTTCCCACTTaGTCTGCCATGCGAGAGGACACTGGTTTAGTTTCT +
Preference number: 6 (lower is better)
Translates to: SGIVRDLLGLPT*SAMREDTGLVS
Trigger: AGAAACTAAACCAGTGTCCTCTCGCATGGCAGAGCAAGTGGGAAGGCCCAGAAGATCCCTTACAATACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533197.1
CDS GCA 72 bp AATATTGGCTTTCACCCAGGCAGCCAAAGGTGCAGCTaGAGTACTGGCACGCTTAGCATTCTTTGGATCAAA +
Preference number: 6 (lower is better)
Translates to: NIGFHPGSQRCS*STGTLSILWIK
Trigger: TTTGATCCAAAGAATGCTAAGCGTGCCAGTACTGCAGCTGCACCTTTGGCTGCCTGGGTGAAAGCCAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375735.7
ENST00000650373.2
CDS CAA 90 bp CTGGTACTGATGCTCCAGAGCTTTGTACAGTTGATGATTCCAGTGTaGTTTCCATGCATGCATGTCACTTGCTTGGAATCCCTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: LVLMLQSFVQLMIPV*FPCMHVTCLESLCF
Trigger: GAAGCACAGGGATTCCAAGCAAGTGACATGCATGCATGGAAACAACACTGGAATCATCAACTGTACAAAGCTCTGGAGCATCAGTACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375735.7
ENST00000648198.1
ENST00000650373.2
CDS GCA 72 bp CCCAGAGTTTTACATGCAAAAAGAGCCATGGCACTTTaGAATCTGTCCGGTCTTAGCGCCTGTACTACAAGA +
Preference number: 6 (lower is better)
Translates to: PRVLHAKRAMAL*NLSGLSACTTR
Trigger: TCTTGTAGTACAGGCGCTAAGACCGGACAGATTGCAAAGTGCCATGGCTCTTTTTGCATGTAAAACTCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375735.7
ENST00000525306.1
ENST00000528670.5
ENST00000650373.2
CDS CCA 72 bp GGCAGGCAGACCAAAGAAACTAGGTTTGTCGTCCTCTaGAATTTTCTCAATGACAGCACGATAGTCCTACCA +
Preference number: 6 (lower is better)
Translates to: GRQTKETRFVVL*NFLNDSTIVLP
Trigger: TGGTAGGACTATCGTGCTGTCATTGAGAAAATTCCAGAGGACGACAAACCTAGTTTCTTTGGTCTGCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528670.5
CDS CAA 72 bp CGAGCGATATTGGCAGGCAGACCAAAGAAACTAGGTTaGTCGTCCTCTGGAATTTTCTCAATGACAGCACGA +
Preference number: 6 (lower is better)
Translates to: RAILAGRPKKLG*SSSGIFSMTAR
Trigger: TCGTGCTGTCATTGAGAAAATTCCAGAGGACGACAAACCTAGTTTCTTTGGTCTGCCTGCCAATATCGCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375735.7
ENST00000528670.5
ENST00000650373.2
CDS CAA 90 bp AACTGGCGAACCCAAACTATACTGTTGACAACTTCTGAAAGATTTTaGCCAGAAAGTGGTCCAGATGCATCACCAGGAATTCCTCGGCAC +
Preference number: 6 (lower is better)
Translates to: NWRTQTILLTTSERF*PESGPDASPGIPRH
Trigger: GTGCCGAGGAATTCCTGGTGATGCATCTGGACCACTTTCTGGCAAAAATCTTTCAGAAGTTGTCAACAGTATAGTTTGGGTTCGCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS CAA 90 bp AACAGAGCCAGTCTCCATTGCGGGCACATTCTTTTAGCATTTGAATaGCTAAATCAGCTTGACCTTGACCCATGGCAACCTGGTGATAAC +
Preference number: 6 (lower is better)
Translates to: NRASLHCGHILLAFE*LNQLDLDPWQPGDN
Trigger: GTTATCACCAGGTTGCCATGGGTCAAGGTCAAGCTGATTTAGCAATTCAAATGCTAAAAGAATGTGCCCGCAATGGAGACTGGCTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375735.7
ENST00000528670.5
ENST00000650373.2
CDS GCA 72 bp AGCTTTGTACAGTTGATGATTCCAGTGTTGTTTCCATaGATGCATGTCACTTGCTTGGAATCCCTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: SFVQLMIPVLFP*MHVTCLESLCF
Trigger: GAAGCACAGGGATTCCAAGCAAGTGACATGCATGCATGGAAACAACACTGGAATCATCAACTGTACAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375735.7
ENST00000648198.1
ENST00000650373.2
CDS CAA 72 bp ATGCTCCAGAGCTTTGTACAGTTGATGATTCCAGTGTaGTTTCCATGCATGCATGTCACTTGCTTGGAATCC +
Preference number: 6 (lower is better)
Translates to: MLQSFVQLMIPV*FPCMHVTCLES
Trigger: GGATTCCAAGCAAGTGACATGCATGCATGGAAACAACACTGGAATCATCAACTGTACAAAGCTCTGGAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375735.7
ENST00000648198.1
ENST00000650373.2
CDS CAA 90 bp AGTCCGAAAAGTGATCCAGTCTTCATTGGCCATTTCCTGAAATCCTaGTTGAAACTCTTCATAAAAGGCCCAAATTTGGGCACAGCTCTC +
Preference number: 6 (lower is better)
Translates to: SPKSDPVFIGHFLKS*LKLFIKGPNLGTAL
Trigger: GAGAGCTGTGCCCAAATTTGGGCCTTTTATGAAGAGTTTCAACAAGGATTTCAGGAAATGGCCAATGAAGACTGGATCACTTTTCGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375735.7
ENST00000648198.1
ENST00000650373.2
CDS GCA 72 bp AACTTGCTGTATTTTGGCAGGAATAACAAAGCCAAGTaGAGAGAGCTGACGAACTTCTCTCAGAAGAATCAC +
Preference number: 6 (lower is better)
Translates to: NLLYFGRNNKAK*RELTNFSQKNH
Trigger: GTGATTCTTCTGAGAGAAGTTCGTCAGCTCTCTGCACTTGGCTTTGTTATTCCTGCCAAAATACAGCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS GCA 72 bp CTCAATTCTTGTAATCCATCTTTCCAGCGCTGTTGCTaGCGAAGCAGATCAATATTCATAAGAACAACCACC +
Preference number: 6 (lower is better)
Translates to: LNSCNPSFQRCC*RSRSIFIRTTT
Trigger: GGTGGTTGTTCTTATGAATATTGATCTGCTTCGGCAGCAACAGCGCTGGAAAGATGGATTACAAGAATTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS CAA 72 bp CGCAGCTTTCCACAAGGGCTCAGTATATGGATTATATaGCACAGGATTCAGGCCAGTAAAAGGTTCAAATAC +
Preference number: 6 (lower is better)
Translates to: RSFPQGLSIWII*HRIQASKRFKY
Trigger: GTATTTGAACCTTTTACTGGCCTGAATCCTGTGCAATATAATCCATATACTGAGCCCTTGTGGAAAGCTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS CAA 72 bp CATGCGAGAGGACACTGGTTTAGTTTCTTCCAGAGATaGAGGACAGGAGAAAGTTCATTAGACCAGATTTCT +
Preference number: 6 (lower is better)
Translates to: HARGHWFSFFQR*RTGESSLDQIS
Trigger: AGAAATCTGGTCTAATGAACTTTCTCCTGTCCTCAATCTCTGGAAGAAACTAAACCAGTGTCCTCTCGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533197.1
CDS TCA 72 bp TGTTCTGTTTGTCTCCACACATCATCTACAACATCCTaGGTAGTCTCCACCAAGTCAACAACTTCTAGTAAG +
Preference number: 6 (lower is better)
Translates to: CSVCLHTSSTTS*VVSTKSTTSSK
Trigger: CTTACTAGAAGTTGTTGACTTGGTGGAGACTACTCAGGATGTTGTAGATGATGTGTGGAGACAAACAGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS TCA 72 bp GGATCTTCCCACAGGTTCAAAGTTCCCAACTTTTTCTaGACAAACCTTCCAAATGAACCACCTATGATGTCT +
Preference number: 6 (lower is better)
Translates to: GSSHRFKVPNFF*TNLPNEPPMMS
Trigger: AGACATCATAGGTGGTTCATTTGGAAGGTTTGTTCAGAAAAAGTTGGGAACTTTGAACCTGTGGGAAGATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS GCA 72 bp GCAGCTTTCCACAAGGGCTCAGTATATGGATTATATTaGACAGGATTCAGGCCAGTAAAAGGTTCAAATACT +
Preference number: 6 (lower is better)
Translates to: AAFHKGSVYGLY*TGFRPVKGSNT
Trigger: AGTATTTGAACCTTTTACTGGCCTGAATCCTGTGCAATATAATCCATATACTGAGCCCTTGTGGAAAGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS GCA 72 bp GTTCTCAATTCTTGTAATCCATCTTTCCAGCGCTGTTaGTGCCGAAGCAGATCAATATTCATAAGAACAACC +
Preference number: 6 (lower is better)
Translates to: VLNSCNPSFQRC*CRSRSIFIRTT
Trigger: GGTTGTTCTTATGAATATTGATCTGCTTCGGCAGCAACAGCGCTGGAAAGATGGATTACAAGAATTGAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS CCA 72 bp TTGTTTCTTGTGCCTTGCTTACTTCAGCCTCAAGTTTaGCAGCTTCTGAAGTCCTGCTCTGAAATTTTTCTT +
Preference number: 6 (lower is better)
Translates to: LFLVPCLLQPQV*QLLKSCSEIFL
Trigger: AAGAAAAATTTCAGAGCAGGACTTCAGAAGCTGCCAAACTTGAGGCTGAAGTAAGCAAGGCACAAGAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375735.7
ENST00000650373.2
CDS CAA 72 bp ATTAAGACTTCTGCAGCTTTGATTGTTTCTTGTGCCTaGCTTACTTCAGCCTCAAGTTTGGCAGCTTCTGAA +
Preference number: 6 (lower is better)
Translates to: IKTSAALIVSCA*LTSASSLAASE
Trigger: TTCAGAAGCTGCCAAACTTGAGGCTGAAGTAAGCAAGGCACAAGAAACAATCAAAGCTGCAGAAGTCTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375735.7
ENST00000650373.2
CDS CAA 90 bp GTATCATCTACCTTCAATTCCAACTGGCGAACCCAAACTATACTGTaGACAACTTCTGAAAGATTTTTGCCAGAAAGTGGTCCAGATGCA +
Preference number: 6 (lower is better)
Translates to: VSSTFNSNWRTQTIL*TTSERFLPESGPDA
Trigger: TGCATCTGGACCACTTTCTGGCAAAAATCTTTCAGAAGTTGTCAACAGTATAGTTTGGGTTCGCCAGTTGGAATTGAAGGTAGATGATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS CAA 90 bp ATTATCAAGATGGGTTCAATTTCCAGTGTCTCTTTGTATAAACGTTaGAGATTTAGAGGCAGTGGGGACACCTCTTTCAGTCCCAGAGTT +
Preference number: 6 (lower is better)
Translates to: IIKMGSISSVSLYKR*RFRGSGDTSFSPRV
Trigger: AACTCTGGGACTGAAAGAGGTGTCCCCACTGCCTCTAAATCTCAAACGTTTATACAAAGAGACACTGGAAATTGAACCCATCTTGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375735.7
ENST00000528670.5
ENST00000650373.2
CDS CAA 90 bp CCCGGAGAAATAATTATCAAGATGGGTTCAATTTCCAGTGTCTCTTaGTATAAACGTTTGAGATTTAGAGGCAGTGGGGACACCTCTTTC +
Preference number: 6 (lower is better)
Translates to: PGEIIIKMGSISSVS*YKRLRFRGSGDTSF
Trigger: GAAAGAGGTGTCCCCACTGCCTCTAAATCTCAAACGTTTATACAAAGAGACACTGGAAATTGAACCCATCTTGATAATTATTTCTCCGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375735.7
ENST00000528670.5
ENST00000650373.2
CDS CAA 90 bp TTCATAAAACTTTGTCCAACCCTGAGGAATATAGTTTCTTCTTTCTaGACATGCAGCATGAAACCATGCAAGACTGAAGAGAGCATGAGC +
Preference number: 6 (lower is better)
Translates to: FIKLCPTLRNIVSSF*TCSMKPCKTEESMS
Trigger: GCTCATGCTCTCTTCAGTCTTGCATGGTTTCATGCTGCATGTCAAGAAAGAAGAAACTATATTCCTCAGGGTTGGACAAAGTTTTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375735.7
ENST00000528670.5
ENST00000650373.2
CDS CAA 72 bp ACCTTCAATTCCAACTGGCGAACCCAAACTATACTGTaGACAACTTCTGAAAGATTTTTGCCAGAAAGTGGT +
Preference number: 6 (lower is better)
Translates to: TFNSNWRTQTIL*TTSERFLPESG
Trigger: ACCACTTTCTGGCAAAAATCTTTCAGAAGTTGTCAACAGTATAGTTTGGGTTCGCCAGTTGGAATTGAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS CAA 72 bp AATCTCCTCAGATCAAATTTCTCAAGACCAGCTGACTaGGTCCATTCTTCCAAACAGGTTTTTCTCAGAGAT +
Preference number: 6 (lower is better)
Translates to: NLLRSNFSRPAD*VHSSKQVFLRD
Trigger: ATCTCTGAGAAAAACCTGTTTGGAAGAATGGACCAAGTCAGCTGGTCTTGAGAAATTTGATCTGAGGAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375735.7
ENST00000650373.2
CDS TCA 72 bp GCAGCAGAAAGATATGTAATAAATGCAGCAGCAAGTTaGGCTCTTTTAGGAAGAGTAGCTAATTCCTCTGTT +
Preference number: 6 (lower is better)
Translates to: AAERYVINAAAS*ALLGRVANSSV
Trigger: AACAGAGGAATTAGCTACTCTTCCTAAAAGAGCTCAACTTGCTGCTGCATTTATTACATATCTTTCTGCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375735.7
ENST00000650373.2
CDS TCA 72 bp TTCTTTCTTGACATGCAGCATGAAACCATGCAAGACTaGAGAGAGCATGAGCTCGATGTGTATTATCTTTTT +
Preference number: 6 (lower is better)
Translates to: FFLDMQHETMQD*REHELDVYYLF
Trigger: AAAAAGATAATACACATCGAGCTCATGCTCTCTTCAGTCTTGCATGGTTTCATGCTGCATGTCAAGAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375735.7
ENST00000528670.5
ENST00000650373.2
CDS CCA 72 bp TTTTCTGTTCTTCTAAATCAGGTTTCTCATGCTGAATaGTTAAAGCTAAAAGCTGCCCTCGTAATCCACTTC +
Preference number: 6 (lower is better)
Translates to: FSVLLNQVSHAE*LKLKAALVIHF
Trigger: GAAGTGGATTACGAGGGCAGCTTTTAGCTTTAACCATTCAGCATGAGAAACCTGATTTAGAAGAACAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375735.7
ENST00000650373.2
CDS CAA 72 bp TGTAGATTCTCATCAGTAATTACTTCAGGTCGCAGCTaGAAAAACACCAGCACTTTATCTTTTGTGTCACCA +
Preference number: 6 (lower is better)
Translates to: CRFSSVITSGRS*KNTSTLSFVSP
Trigger: TGGTGACACAAAAGATAAAGTGCTGGTGTTTTTCAAGCTGCGACCTGAAGTAATTACTGATGAGAATCTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS TCA 72 bp TATAGTTTAAGCTGGTCTAAGAGATCTTTGGCACTTTaGTGGAAACATCGAAATCCTGGCAAGTCAGATAAA +
Preference number: 6 (lower is better)
Translates to: YSLSWSKRSLAL*WKHRNPGKSDK
Trigger: TTTATCTGACTTGCCAGGATTTCGATGTTTCCATCAAAGTGCCAAAGATCTCTTAGACCAGCTTAAACTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS TCA 72 bp ATACACAAACCAGATCTGGAATCAGATAAACCTGATTaGATATCCCTGGACCAATCATCAAATTGTTCCTGT +
Preference number: 6 (lower is better)
Translates to: IHKPDLESDKPD*ISLDQSSNCSC
Trigger: ACAGGAACAATTTGATGATTGGTCCAGGGATATTCAATCAGGTTTATCTGATTCCAGATCTGGTTTGTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS TCA 72 bp TTTGTTTTCTGTTCTTCTAAATCAGGTTTCTCATGCTaGATGGTTAAAGCTAAAAGCTGCCCTCGTAATCCA +
Preference number: 6 (lower is better)
Translates to: FVFCSSKSGFSC*MVKAKSCPRNP
Trigger: TGGATTACGAGGGCAGCTTTTAGCTTTAACCATTCAGCATGAGAAACCTGATTTAGAAGAACAGAAAACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375735.7
ENST00000650373.2
CDS CAA 72 bp ATAATTATCAAGATGGGTTCAATTTCCAGTGTCTCTTaGTATAAACGTTTGAGATTTAGAGGCAGTGGGGAC +
Preference number: 6 (lower is better)
Translates to: IIIKMGSISSVS*YKRLRFRGSGD
Trigger: GTCCCCACTGCCTCTAAATCTCAAACGTTTATACAAAGAGACACTGGAAATTGAACCCATCTTGATAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375735.7
ENST00000528670.5
ENST00000650373.2
CDS CAA 90 bp ATGTTATCATGTAGATTCTCATCAGTAATTACTTCAGGTCGCAGCTaGAAAAACACCAGCACTTTATCTTTTGTGTCACCAAACTCAATC +
Preference number: 6 (lower is better)
Translates to: MLSCRFSSVITSGRS*KNTSTLSFVSPNSI
Trigger: GATTGAGTTTGGTGACACAAAAGATAAAGTGCTGGTGTTTTTCAAGCTGCGACCTGAAGTAATTACTGATGAGAATCTACATGATAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS CAA 90 bp TATGGGATATTTATAAAAGTGATTCATACTTTAAGGTCGGCAGCTTaGGCTACAATTGTATCAGCTACTCTGAGCAAATCACCAAACAGT +
Preference number: 6 (lower is better)
Translates to: YGIFIKVIHTLRSAA*ATIVSATLSKSPNS
Trigger: ACTGTTTGGTGATTTGCTCAGAGTAGCTGATACAATTGTAGCCAAAGCTGCCGACCTTAAAGTATGAATCACTTTTATAAATATCCCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS CCA 72 bp CAGATCTGGAATCAGATAAACCTGATTGAATATCCCTaGACCAATCATCAAATTGTTCCTGTTCATATAGTT +
Preference number: 6 (lower is better)
Translates to: QIWNQINLIEYP*TNHQIVPVHIV
Trigger: AACTATATGAACAGGAACAATTTGATGATTGGTCCAGGGATATTCAATCAGGTTTATCTGATTCCAGATCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS CAA 72 bp TTTATAAAAGTGATTCATACTTTAAGGTCGGCAGCTTaGGCTACAATTGTATCAGCTACTCTGAGCAAATCA +
Preference number: 6 (lower is better)
Translates to: FIKVIHTLRSAA*ATIVSATLSKS
Trigger: TGATTTGCTCAGAGTAGCTGATACAATTGTAGCCAAAGCTGCCGACCTTAAAGTATGAATCACTTTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648198.1
CDS TCA 72 bp TTAAAAACAAATAATTCAGGTCAGTGGTCTAGTTCTTaGAAAGCATCACACTTACCCAGAGTTTTACATGCA +
Preference number: 6 (lower is better)
Translates to: LKTNNSGQWSSS*KASHLPRVLHA
Trigger: TGCATGTAAAACTCTGGGTAAGTGTGATGCTTTTCAAGAACTAGACCACTGACCTGAATTATTTGTTTTTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525306.1
CDS GCA 72 bp TTGTTTAAGAATAATTGCTTGCTTGCAGAATTTCTGTaGAATGTTTGCAACTTGCTGTATTTTGGCAGGAAT +
Preference number: 6 (lower is better)
Translates to: LFKNNCLLAEFL*NVCNLLYFGRN
Trigger: ATTCCTGCCAAAATACAGCAAGTTGCAAACATTGCACAGAAATTCTGCAAGCAAGCAATTATTCTTAAACAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334267.11
ENST00000375735.7
ENST00000648198.1
ENST00000649323.1
ENST00000650373.2
CDS CCA 72 bp TCATATACCATATGTTGTAATGAGCTGATAAGTGACTaGATTCTCTGTTCTGTATTTTCAGAATCCTGTTTG +
Preference number: 6 (lower is better)
Translates to: SYTICCNELISD*ILCSVFSESCL
Trigger: CAAACAGGATTCTGAAAATACAGAACAGAGAATCCAGTCACTTATCAGCTCATTACAACATATGGTATATGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375735.7
ENST00000650373.2