Pregenerated sensors for DYNC1I2 (Homo sapiens)
Ensembl gene IDs: ENSG00000077380Ensembl transcript IDs: ENST00000340296.8, ENST00000397119.8, ENST00000409197.5, ENST00000412370.5, ENST00000430778.5, ENST00000435234.5, ENST00000443458.5, ENST00000452242.5
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTATGGGTCCATTTGAGCACTTTGCCTTTATGGCTACTGAAATCATaGAATCAATTTCTCTCAAAGATTTTACTCTCAGTGAGGTCACAT | + |
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Preference number: 1 (lower is better) Translates to: VWVHLSTLPLWLLKS*NQFLSKILLSVRSH Trigger: ATGTGACCTCACTGAGAGTAAAATCTTTGAGAGAAATTGATTTCATGATTTCAGTAGCCATAAAGGCAAAGTGCTCAAATGGACCCATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| 3UTR GCA 90 bp | CTGATTCTTAGATATTTGTCACCTACCTTTCGGACTTGTAGACAATaGTGTGGCAACAGATCTCAAGATGTAGATTTTAATGCCAAAGTA | + |
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Preference number: 1 (lower is better) Translates to: LILRYLSPTFRTCRQ*CGNRSQDVDFNAKV Trigger: TACTTTGGCATTAAAATCTACATCTTGAGATCTGTTGCCACAGCATTGTCTACAAGTCCGAAAGGTAGGTGACAAATATCTAAGAATCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| 3UTR-3UTR TCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACCAGCTCTATAGGATTTaGGATGGCTGCTCACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYQLYRI*DGCSQQ Trigger: CTGCTGTGAGCAGCCATCTCAAATCCTATAGAGCTG...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| 3UTR GCA 72 bp | AGATATTTGTCACCTACCTTTCGGACTTGTAGACAATaGTGTGGCAACAGATCTCAAGATGTAGATTTTAAT | + |
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Preference number: 3 (lower is better) Translates to: RYLSPTFRTCRQ*CGNRSQDVDFN Trigger: ATTAAAATCTACATCTTGAGATCTGTTGCCACAGCATTGTCTACAAGTCCGAAAGGTAGGTGACAAATATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| 3UTR TCA 72 bp | CATTTGAGCACTTTGCCTTTATGGCTACTGAAATCATaGAATCAATTTCTCTCAAAGATTTTACTCTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: HLSTLPLWLLKS*NQFLSKILLSV Trigger: CACTGAGAGTAAAATCTTTGAGAGAAATTGATTTCATGATTTCAGTAGCCATAAAGGCAAAGTGCTCAAATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR GCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACGGATCTGTATCCCAATaGAGCGTCCTAGATCCCACG | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYGSVSQ*SVLDPT Trigger: CGTGGGATCTAGGACGCTGCATTGGGATACAGATCC...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR TCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACGGCAGACATCACAGCTaGCTGGCAGTGAAACACATA | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYGRHHS*LAVKHI Trigger: TATGTGTTTCACTGCCAGTCAGCTGTGATGTCTGCC...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR CCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACCTCCATGCTATCCTGTaGATGGGAAAGCATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYLHAIL*MGKHVQ Trigger: CTGGACATGCTTTCCCATCCACAGGATAGCATGGAG...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR GCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACCGGGGAACAGCAATCTaGTCTCCCACATCGTATATA | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYRGTAI*SPTSYI Trigger: TATATACGATGTGGGAGAGCAGATTGCTGTTCCCCG...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| 3UTR CAA 72 bp | CACACTTCTCATAGATGCTTCAGCAAGAATCAGAGTTaGGGGCCAATAATTCCAGGTCAATTATTCCTTACA | + |
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Preference number: 4 (lower is better) Translates to: HTSHRCFSKNQS*GPIIPGQLFLT Trigger: TGTAAGGAATAATTGACCTGGAATTATTGGCCCCAAACTCTGATTCTTGCTGAAGCATCTATGAGAAGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR TCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACTGTCTGACATGTTTGTaGCCTGTCGTAAAGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYCLTCL*PVVKQK Trigger: CTTCTGCTTTACGACAGGTCACAAACATGTCAGACA...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR TCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACGTGAAGCTGAAGAACTaGTGGATCTGTATCCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYVKLKN*WICIPM Trigger: CATTGGGATACAGATCCATCAGTTCTTCAGCTTCAC...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR TCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACAAGTATGGGTCCATTTaGGCACTTTGCCTTTATGGC | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYKYGSI*ALCLYG Trigger: GCCATAAAGGCAAAGTGCTCAAATGGACCCATACTT...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR GCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACCGGACTTGTAGACAATaGTGTGGCAACAGATCTCAA | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYRTCRQ*CGNRSQ Trigger: TTGAGATCTGTTGCCACAGCATTGTCTACAAGTCCG...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR TCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACAGTTTAGCACCTGCTTaGATCTCTCCTTCTTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYSLAPA*ISPSLS Trigger: AGACAAAGAAGGAGAGATTCAAGCAGGTGCTAAACT...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR TCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACAGTAACTCCGGATACTaGGATGACCAATCCAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYSNSGY*DDQSKQ Trigger: TTGTTTGGATTGGTCATCTCAGTATCCGGAGTTACT...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR GCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACTATGAACCAACTCCATaGTATCCTGTGGATGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYYEPTP*YPVDGK Trigger: TTTCCCATCCACAGGATAGCATGGAGTTGGTTCATA...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR GCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACCACACTTCTCATAGATaGTTCAGCAAGAATCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYHTSHR*FSKNQS Trigger: ACTCTGATTCTTGCTGAAGCATCTATGAGAAGTGTG...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR CCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACAGAAATGCTGGCAGTTaGTACCTCTGTGTCATTATT | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYRNAGS*YLCVII Trigger: AATAATGACACAGAGGTACCAACTGCCAGCATTTCT...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR CCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACTGGACTAAAGTTGAATaGGCAAAGGTATACATCGCA | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYWTKVE*AKVYIA Trigger: TGCGATGTATACCTTTGCCCATTCAACTTTAGTCCA...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR TCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACAGATTTTACTCTCAGTaGGGTCACATACATAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYRFYSQ*GHIHSS Trigger: AGAACTATGTATGTGACCTCACTGAGAGTAAAATCT...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR TCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACCTGATACCCCTTAATTaGGTAGAGCTGAAAGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYLIPLN*VELKEN Trigger: ATTTTCTTTCAGCTCTACTCAATTAAGGGGTATCAG...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR TCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACCAGACACTGCTACAATaGGATAACTTGAGATATTGT | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYQTLLQ*DNLRYC Trigger: ACAATATCTCAAGTTATCTCATTGTAGCAGTGTCTG...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR TCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACAAGCTTTATCAACACTaGCAGTCTCAATACTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYKLYQH*QSQYFL Trigger: GAGAAAGTATTGAGACTGTCAGTGTTGATAAAGCTT...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR TCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACAAGTATAAAGAACTGTaGTGCACTTCTAGTCAACCT | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYKYKEL*CTSSQP Trigger: AGGTTGACTAGAAGTGCATCACAGTTCTTTATACTT...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR TCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACCAAGTTAATTGTCTGTaGAGCTGGATATTCCTTAAC | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYQVNCL*SWIFLN Trigger: GTTAAGGAATATCCAGCTTCACAGACAATTAACTTG...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR GCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACGAGGAACATGTGATTTaGCATATGATTTCCAACCTT | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYEEHVI*HMISNL Trigger: AAGGTTGGAAATCATATGGCAAATCACATGTTCCTC...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR CCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACCGCTTTGCCAAAAACTaGAAAACTACGCCTAATATT | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYRFAKN*KTTPNI Trigger: AATATTAGGCGTAGTTTTCCAGTTTTTGGCAAAGCG...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR CCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACTTTAATGCCAAAGTATaGGTCCATTTGAGCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYFNAKV*VHLSTL Trigger: CAAAGTGCTCAAATGGACCCATACTTTGGCATTAAA...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR CCA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACGTGTTCCTAAAAATATaGACTAAAGTTGAATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYVFLKI*TKVEWA Trigger: TGCCCATTCAACTTTAGTCCATATTTTTAGGAACAC...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS CCA 90 bp | GGCCAAGAGGGCGCGGTCCACGGCAGGGCGTCCGGAAGAAGCCAGTaGGCGCCGGACAAGCCTCAAGGCTCCCCAGGCCGCCTCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: GQEGAVHGRASGRSQ*APDKPQGSPGRLWR Trigger: CCTCCAGAGGCGGCCTGGGGAGCCTTGAGGCTTGTCCGGCGCCCACTGGCTTCTTCCGGACGCCCTGCCGTGGACCGCGCCCTCTTGGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412370.5 ENST00000443458.5 |
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| CDS CCA 90 bp | AGCCAGTGGGCGCCGGACAAGCCTCAAGGCTCCCCAGGCCGCCTCTaGAGGGTCGAGAAGGGAAAGGAGTGGACTCCTCTCGCCGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: SQWAPDKPQGSPGRL*RVEKGKEWTPLAGP Trigger: CGGCCCGGCGAGAGGAGTCCACTCCTTTCCCTTCTCGACCCTCCAGAGGCGGCCTGGGGAGCCTTGAGGCTTGTCCGGCGCCCACTGGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412370.5 ENST00000443458.5 |
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| CDS GCA 90 bp | CCTTTCCTCCCCAAAGCTGGGCCGGGCGGGGATGTCAGCAGGAACTaGCAAGCCGCCCTTCGAGTTGCGACGTGGAACACAGGCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: PFLPKAGPGGDVSRN*QAALRVATWNTGRE Trigger: CTCCCTGCCTGTGTTCCACGTCGCAACTCGAAGGGCGGCTTGGCAGTTCCTGCTGACATCCCCGCCCGGCCCAGCTTTGGGGAGGAAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435234.5 |
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| CDS GCA 90 bp | AGCTCCGCGGCTTTCCAAAGCACACAAAGAGGGATGGGCGGCGGCTaGTACGGCGAGAGCTTAGGGACAAATAGCCTCACCAGAACGAGG | + |
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Preference number: 5 (lower is better) Translates to: SSAAFQSTQRGMGGG*YGESLGTNSLTRTR Trigger: CCTCGTTCTGGTGAGGCTATTTGTCCCTAAGCTCTCGCCGTAGCAGCCGCCGCCCATCCCTCTTTGTGTGCTTTGGAAAGCCGCGGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409197.5 |
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| CDS TCA 90 bp | ATATTCTCAGGCCAGGAATCCAACTTCCGCCCTCGCCTTACAAACTaGCACGATCGAGAAGAACTACAAACCCCGGCAACAAGGAAAACC | + |
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Preference number: 5 (lower is better) Translates to: IFSGQESNFRPRLTN*HDREELQTPATRKT Trigger: GGTTTTCCTTGTTGCCGGGGTTTGTAGTTCTTCTCGATCGTGTCAGTTTGTAAGGCGAGGGCGGAAGTTGGATTCCTGGCCTGAGAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340296.8 ENST00000452242.5 |
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| CDS TCA 90 bp | TTCCACTCTTTCTACACCTCTAAACAGCTCCATACAAACGGCTGGTaGAGAGAACTTCCATACGTAACTGTATGCTACGCTAGGCACATT | + |
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Preference number: 5 (lower is better) Translates to: FHSFYTSKQLHTNGW*RELPYVTVCYARHI Trigger: AATGTGCCTAGCGTAGCATACAGTTACGTATGGAAGTTCTCTTCACCAGCCGTTTGTATGGAGCTGTTTAGAGGTGTAGAAAGAGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430778.5 |
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| CDS-3UTR CAA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACCAGAAATGCTGGCAGTaGGTACCTCTGTGTCATTAT | + |
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Preference number: 5 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYQKCWQ*VPLCHY Trigger: ATAATGACACAGAGGTACCAACTGCCAGCATTTCTG...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR CAA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACAGCAAGAATCAGAGTTaGGGGCCAATAATTCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYSKNQS*GPIIPG Trigger: ACCTGGAATTATTGGCCCCAAACTCTGATTCTTGCT...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR CAA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACGTCCATTTGAGCACTTaGCCTTTATGGCTACTGAAA | + |
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Preference number: 5 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYVHLST*PLWLLK Trigger: TTTCAGTAGCCATAAAGGCAAAGTGCTCAAATGGAC...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR CAA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACAAAGTATGGGTCCATTaGAGCACTTTGCCTTTATGG | + |
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Preference number: 5 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYKVWVH*STLPLW Trigger: CCATAAAGGCAAAGTGCTCAAATGGACCCATACTTT...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR CAA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACCTGATTCTTAGATATTaGTCACCTACCTTTCGGACT | + |
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Preference number: 5 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYLILRY*SPTFRT Trigger: AGTCCGAAAGGTAGGTGACAAATATCTAAGAATCAG...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR CAA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACACTAAAATTGAAGTTTaGACTCACAGACACTGCTAC | + |
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Preference number: 5 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYTKIEV*THRHCY Trigger: GTAGCAGTGTCTGTGAGTCAAAACTTCAATTTTAGT...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS-3UTR CAA 90 bp | TTCATAATGCACTGGGAGATCTATAGTATATACCACATGGTATATTTAGGGTACCTAGTCAACCTAATCTaGCTAGAAGCTTTATCAACA | + |
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Preference number: 5 (lower is better) Translates to: FIMHWEIYSIYHMVYLGYLVNLI*LEALST Trigger: TGTTGATAAAGCTTCTAGCAAGATTAGGTTGACTAG...GTACCCTAAATATACCATGTGGTATATACTATAGATCTCCCAGTGCATTATGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397119.8 |
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| CDS CCA 72 bp | GGCGCGGTCCACGGCAGGGCGTCCGGAAGAAGCCAGTaGGCGCCGGACAAGCCTCAAGGCTCCCCAGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: GAVHGRASGRSQ*APDKPQGSPGR Trigger: GCGGCCTGGGGAGCCTTGAGGCTTGTCCGGCGCCCACTGGCTTCTTCCGGACGCCCTGCCGTGGACCGCGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412370.5 ENST00000443458.5 |
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| CDS CCA 72 bp | GCGCCGGACAAGCCTCAAGGCTCCCCAGGCCGCCTCTaGAGGGTCGAGAAGGGAAAGGAGTGGACTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: APDKPQGSPGRL*RVEKGKEWTPL Trigger: GAGAGGAGTCCACTCCTTTCCCTTCTCGACCCTCCAGAGGCGGCCTGGGGAGCCTTGAGGCTTGTCCGGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412370.5 ENST00000443458.5 |
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| CDS GCA 72 bp | CCCAAAGCTGGGCCGGGCGGGGATGTCAGCAGGAACTaGCAAGCCGCCCTTCGAGTTGCGACGTGGAACACA | + |
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Preference number: 6 (lower is better) Translates to: PKAGPGGDVSRN*QAALRVATWNT Trigger: TGTGTTCCACGTCGCAACTCGAAGGGCGGCTTGGCAGTTCCTGCTGACATCCCCGCCCGGCCCAGCTTTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435234.5 |
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| CDS GCA 72 bp | GCTTTCCAAAGCACACAAAGAGGGATGGGCGGCGGCTaGTACGGCGAGAGCTTAGGGACAAATAGCCTCACC | + |
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Preference number: 6 (lower is better) Translates to: AFQSTQRGMGGG*YGESLGTNSLT Trigger: GGTGAGGCTATTTGTCCCTAAGCTCTCGCCGTAGCAGCCGCCGCCCATCCCTCTTTGTGTGCTTTGGAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409197.5 |
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| CDS TCA 72 bp | GGCCAGGAATCCAACTTCCGCCCTCGCCTTACAAACTaGCACGATCGAGAAGAACTACAAACCCCGGCAACA | + |
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Preference number: 6 (lower is better) Translates to: GQESNFRPRLTN*HDREELQTPAT Trigger: TGTTGCCGGGGTTTGTAGTTCTTCTCGATCGTGTCAGTTTGTAAGGCGAGGGCGGAAGTTGGATTCCTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340296.8 ENST00000452242.5 |
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| CDS TCA 72 bp | TTCTACACCTCTAAACAGCTCCATACAAACGGCTGGTaGAGAGAACTTCCATACGTAACTGTATGCTACGCT | + |
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Preference number: 6 (lower is better) Translates to: FYTSKQLHTNGW*RELPYVTVCYA Trigger: AGCGTAGCATACAGTTACGTATGGAAGTTCTCTTCACCAGCCGTTTGTATGGAGCTGTTTAGAGGTGTAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430778.5 |
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