RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DYNC1I1 (Homo sapiens)

Ensembl gene IDs: ENSG00000158560

Ensembl transcript IDs: ENST00000324972.10, ENST00000359388.8, ENST00000413338.5, ENST00000437599.5, ENST00000447467.6, ENST00000457059.2, ENST00000497626.1, ENST00000518089.5, ENST00000519371.1, ENST00000524053.5, ENST00000537881.5, ENST00000630942.2

Found 572 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTaGCTGCAGACGCTGAGCTCTAGGACACAAAGGTGGGGGCTGCAG +
Preference number: 1 (lower is better)
Translates to: ITAILILNGHRIQET*LQTLSSRTQRWGLQ
Trigger: CTGCAGCCCCCACCTTTGTGTCCTAGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR TCA 90 bp CATGTAAAACACCACGTCTCAAGTCTTTGGCCCTGTACCATAATATaGGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGG +
Preference number: 1 (lower is better)
Translates to: HVKHHVSSLWPCTII*GTPHLHPIISGFIW
Trigger: CCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
3UTR GCA 90 bp ACCTCTAAAGATTTCATGTCTTCAGTGGAACTGGCATACTGTAATTaGTATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATA +
Preference number: 1 (lower is better)
Translates to: TSKDFMSSVELAYCN*YVELNITSTAAERI
Trigger: TATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCAATTACAGTATGCCAGTTCCACTGAAGACATGAAATCTTTAGAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
3UTR-3UTR TCA 90 bp TTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAACTTGACTGCAGACGCTaGGCTCTAGGACACAAAGGT +
Preference number: 2 (lower is better)
Translates to: LEYLEQSWHNMAPKISQQLDCRR*ALGHKG
Trigger: ACCTTTGTGTCCTAGAGCTCAGCGTCTGCAGTCAAG...TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR TCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGCTTGACTGCAGACGCTaGGCTCTAGGACACAAAGGT +
Preference number: 2 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMLDCRR*ALGHKG
Trigger: ACCTTTGTGTCCTAGAGCTCAGCGTCTGCAGTCAAG...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR TCA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATCTTGACTGCAGACGCTaGGCTCTAGGACACAAAGGT +
Preference number: 2 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNLDCRR*ALGHKG
Trigger: ACCTTTGTGTCCTAGAGCTCAGCGTCTGCAGTCAAG...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR TCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCCTTGACTGCAGACGCTaGGCTCTAGGACACAAAGGT +
Preference number: 2 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSLDCRR*ALGHKG
Trigger: ACCTTTGTGTCCTAGAGCTCAGCGTCTGCAGTCAAG...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR TCA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACGAATACAAGAGACTTaGCTGCAGACGCTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: LGAKLAQYGTQNITAILIRIQET*LQTLSS
Trigger: AGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCG...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR TCA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATCTTGACTGCAGACGCTaGGCTCTAGGACACAAAGGT +
Preference number: 2 (lower is better)
Translates to: YVELNITSTAAERIQSSHLDCRR*ALGHKG
Trigger: ACCTTTGTGTCCTAGAGCTCAGCGTCTGCAGTCAAG...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
3UTR-3UTR TCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCCGAATACAAGAGACTTaGCTGCAGACGCTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSRIQET*LQTLSS
Trigger: AGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCG...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR TCA 90 bp AGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTATTCCCACCACTTTGGGATaGAGAGGGAGGAGAATCATT +
Preference number: 2 (lower is better)
Translates to: STKVLRVLLWWWKHDVFIPTTLG*RGRRII
Trigger: AATGATTCTCCTCCCTCTTCATCCCAAAGTGGTGGG...AATAAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413338.5
3UTR-3UTR CCA 90 bp ATAAGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTAGGATCCCACCACTTTaGGATGAAGAGGGAGGAGAA +
Preference number: 2 (lower is better)
Translates to: ISTKVLRVLLWWWKHDVFRIPPL*DEEGGE
Trigger: TTCTCCTCCCTCTTCATCCCAAAGTGGTGGGATCCT...AAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413338.5
3UTR-3UTR TCA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATCGAATACAAGAGACTTaGCTGCAGACGCTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: YVELNITSTAAERIQSSHRIQET*LQTLSS
Trigger: AGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCG...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
3UTR CAA 90 bp GAATTTTGGGTCAGTGGAAAGCATGATGGGACACATTTAGAATACTaGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAA +
Preference number: 2 (lower is better)
Translates to: EFWVSGKHDGTHLEY*EQSWHNMAPKISQQ
Trigger: TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTCCCATCATGCTTTCCACTGACCCAAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR TCA 90 bp TCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAACCCGAATACAAGAGACTTaGCTGCAGACGCTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: SYGFNRTMPGVHVSTNLTRIQET*LQTLSS
Trigger: AGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCG...GGTTAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR CCA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATAAAGCTGGCACAATATaGCACCCAAAATATCACAGC +
Preference number: 2 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNKAGTI*HPKYHS
Trigger: GCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTT...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR CCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGAAAGCTGGCACAATATaGCACCCAAAATATCACAGC +
Preference number: 2 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMKAGTI*HPKYHS
Trigger: GCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTT...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR CCA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAAAAGCTGGCACAATATaGCACCCAAAATATCACAGC +
Preference number: 2 (lower is better)
Translates to: HICTQSYLASYGFNRTMPKAGTI*HPKYHS
Trigger: GCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTT...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR CCA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTACTTGGAGCAAAGCTaGCACAATATGGCACCCAAA +
Preference number: 2 (lower is better)
Translates to: YVELNITSTAAERIQSSHYLEQS*HNMAPK
Trigger: TTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTA...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
3UTR-3UTR CCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCTGCTGTGGTGAATTTTaGGTCAGTGGAAAGCATGAT +
Preference number: 2 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSCCGEF*VSGKHD
Trigger: ATCATGCTTTCCACTGACCCAAAATTCACCACAGCA...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR CCA 90 bp GAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTATGCATGCTGTGGTGAATTTTaGGTCAGTGGAAAGCATGAT +
Preference number: 2 (lower is better)
Translates to: ELNITSTAAERIQSSHYACCGEF*VSGKHD
Trigger: ATCATGCTTTCCACTGACCCAAAATTCACCACAGCA...TGCATAATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
3UTR-3UTR CCA 90 bp GACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCAATACTGATACTGAATaGACACCGAATACAAGAGAC +
Preference number: 2 (lower is better)
Translates to: DTFRILGAKLAQYGTQNINTDTE*TPNTRD
Trigger: GTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATT...GATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR CCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCAATACTGATACTGAATaGACACCGAATACAAGAGAC +
Preference number: 2 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSNTDTE*TPNTRD
Trigger: GTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATT...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR CCA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTATGCTGTGGTGAATTTTaGGTCAGTGGAAAGCATGAT +
Preference number: 2 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLCCGEF*VSGKHD
Trigger: ATCATGCTTTCCACTGACCCAAAATTCACCACAGCA...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR CCA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCTATACTTCCAGATTTTaGTACTCATCTCTCAGTAGC +
Preference number: 2 (lower is better)
Translates to: TATFHIDKRVSSSQTHEIYTSRF*YSSLSS
Trigger: GCTACTGAGAGATGAGTACCAAAATCTGGAAGTATA...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
3UTR TCA 72 bp CACCACGTCTCAAGTCTTTGGCCCTGTACCATAATATaGGGAACACCACATCTGCACCCAATCATATCTGGC +
Preference number: 3 (lower is better)
Translates to: HHVSSLWPCTII*GTPHLHPIISG
Trigger: GCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTACAGGGCCAAAGACTTGAGACGTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
3UTR TCA 72 bp ATACTGATACTGAATGGACACCGAATACAAGAGACTTaGCTGCAGACGCTGAGCTCTAGGACACAAAGGTGG +
Preference number: 3 (lower is better)
Translates to: ILILNGHRIQET*LQTLSSRTQRW
Trigger: CCACCTTTGTGTCCTAGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR CAA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCACCGAATACAAGAGACTaGACTGCAGACGCTGAGCTC +
Preference number: 3 (lower is better)
Translates to: HICTQSYLASYGFNRTMPPNTRD*TADAEL
Trigger: GAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGG...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR CAA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGCCGAATACAAGAGACTaGACTGCAGACGCTGAGCTC +
Preference number: 3 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMPNTRD*TADAEL
Trigger: GAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGG...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR CAA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTACCGAATACAAGAGACTaGACTGCAGACGCTGAGCTC +
Preference number: 3 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLPNTRD*TADAEL
Trigger: GAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGG...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR CAA 90 bp GAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTATGCACCGAATACAAGAGACTaGACTGCAGACGCTGAGCTC +
Preference number: 3 (lower is better)
Translates to: ELNITSTAAERIQSSHYAPNTRD*TADAEL
Trigger: GAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGG...TGCATAATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
3UTR-3UTR CAA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATCCGAATACAAGAGACTaGACTGCAGACGCTGAGCTC +
Preference number: 3 (lower is better)
Translates to: YVELNITSTAAERIQSSHPNTRD*TADAEL
Trigger: GAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGG...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
3UTR CCA 72 bp CATGATGGGACACATTTAGAATACTTGGAGCAAAGCTaGCACAATATGGCACCCAAAATATCACAGCAATAC +
Preference number: 3 (lower is better)
Translates to: HDGTHLEYLEQS*HNMAPKISQQY
Trigger: GTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTCCCATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR CCA 72 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTaGCTTCATATGGATTTAATAGGACTATGCCAGGAG +
Preference number: 3 (lower is better)
Translates to: NMRNTTSAPNHI*LHMDLIGLCQE
Trigger: CTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR-3UTR CAA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAACACATTTAGAATACTaGGAGCAAAGCTGGCACAAT +
Preference number: 3 (lower is better)
Translates to: HICTQSYLASYGFNRTMPTHLEY*EQSWHN
Trigger: ATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR GCA 72 bp CTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTATaGACATGCTCTAGGATCATTTATTTTAATGCTTTC +
Preference number: 3 (lower is better)
Translates to: LNSSRENTVLSL*TCSRIIYFNAF
Trigger: GAAAGCATTAAAATAAATGATCCTAGAGCATGTGCATAATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
3UTR GCA 72 bp GATTTCATGTCTTCAGTGGAACTGGCATACTGTAATTaGTATGTGGAACTTAATATAACCTCAACAGCAGCA +
Preference number: 3 (lower is better)
Translates to: DFMSSVELAYCN*YVELNITSTAA
Trigger: TGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCAATTACAGTATGCCAGTTCCACTGAAGACATGAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
3UTR-3UTR CAA 90 bp TCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAACCACACATTTAGAATACTaGGAGCAAAGCTGGCACAAT +
Preference number: 3 (lower is better)
Translates to: SYGFNRTMPGVHVSTNLTTHLEY*EQSWHN
Trigger: ATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT...GGTTAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGGGCGCGGGCAGGATGTaGTGTCTCACGCTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: GAKLAQYGTQNITAILILGAGRM*CLTLRR
Trigger: CCGGCGCAGCGTGAGACAGCACATCCTGCCCGCGCC...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGGACATGTTGGTTTCCTaGACGCGCTCGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWDMLVS*TRSAAA
Trigger: CGCCGCTGCCGAGCGCGTCCAGGAAACCAACATGTC...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGGGGTGTCCGCTGCACTaGAGTCCTTCGATGACTGCG +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWGCPLH*SPSMTA
Trigger: CGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCC...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR TCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGGCTCTCCTGTGGAGTTaGGAGCATGTCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWALLWS*EHVQAP
Trigger: TGGAGCCTGGACATGCTCTCAACTCCACAGGAGAGC...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR GCA 90 bp ATAAGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTGGCGCGGGCAGGATGTaGTGTCTCACGCTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: ISTKVLRVLLWWWKHDVFGAGRM*CLTLRR
Trigger: CCGGCGCAGCGTGAGACAGCACATCCTGCCCGCGCC...AAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR TCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGCCTCGGTGTCATTGTTaGGGTTCCAGAGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWPRCHC*GSRGPS
Trigger: GCTTGGACCTCTGGAACCTCAACAATGACACCGAGG...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR GCA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCAGGCGCGGGCAGGATGTaGTGTCTCACGCTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: THLEYLEQSWHNMAPKISGAGRM*CLTLRR
Trigger: CCGGCGCAGCGTGAGACAGCACATCCTGCCCGCGCC...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACAGGCGCGGGCAGGATGTaGTGTCTCACGCTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTGAGRM*CLTLRR
Trigger: CCGGCGCAGCGTGAGACAGCACATCCTGCCCGCGCC...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAGGCGCGGGCAGGATGTaGTGTCTCACGCTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLGAGRM*CLTLRR
Trigger: CCGGCGCAGCGTGAGACAGCACATCCTGCCCGCGCC...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGGCAAAAAGCGCAGGATaGACGGGGGACCACATGACA +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWAKSAG*TGDHMT
Trigger: TGTCATGTGGTCCCCCGTGCATCCTGCGCTTTTTGC...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp AGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCTGACATGTTGGTTTCCTaGACGCGCTCGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: SNTDTEWTPNTRDLTADADMLVS*TRSAAA
Trigger: CGCCGCTGCCGAGCGCGTCCAGGAAACCAACATGTC...AGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp TCACCATGTAAAACACCACGTCTCAAGTCTTTGGCCCTGTACCATAATATGAGGGACATGTTGGTTTCCTaGACGCGCTCGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: SPCKTPRLKSLALYHNMRDMLVS*TRSAAA
Trigger: CGCCGCTGCCGAGCGCGTCCAGGAAACCAACATGTC...CCTCATATTATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGCGGATGCCCCCTCAATaGCCACACTTGCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWRMPPQ*PHLLLE
Trigger: TTCCAACAGCAAGTGTGGCCATTGAGGGGGCATCCG...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR TCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACTGGCCCCAGATCGCCTaGGTCTTGGCTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADWPQIA*VLASSF
Trigger: GAAGCTGGAAGCCAAGACTCAGGCGATCTGGGGCCA...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGCAGCTGGAGCACTaGGGGGTCTGTGTCCCACTG +
Preference number: 4 (lower is better)
Translates to: LGAKLAQYGTQNITAILILQLEH*GVCVPL
Trigger: CAGTGGGACACAGACCCCTCAGTGCTCCAGCTGCAG...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGACCAGTCCATACAAGTaGCCACTCGATGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWTSPYK*PLDAWT
Trigger: GGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGT...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR GCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGGTCGATTGGGCCCACTaGCATGTGGCAGTTAATTCC +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWVDWAH*HVAVNS
Trigger: GGAATTAACTGCCACATGGCAGTGGGCCCAATCGAC...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGGGGTGTCCGCTGCACTaGAGTCCTTCGATGACTGCG +
Preference number: 4 (lower is better)
Translates to: GAKLAQYGTQNITAILILGCPLH*SPSMTA
Trigger: CGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCC...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGGTGAGAAAAGTCGATTaGGCCCACTGCCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWVRKVD*AHCHVA
Trigger: TGCCACATGGCAGTGGGCCCAATCGACTTTTCTCAC...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp AGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCTGGGCTGCAGTGGGGGTaGCTCATTTCCACTAGGCAG +
Preference number: 4 (lower is better)
Translates to: SNTDTEWTPNTRDLTADAGLQWG*LISTRQ
Trigger: CTGCCTAGTGGAAATGAGCCACCCCCACTGCAGCCC...AGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAACTGCAGCTGGAGCACTaGGGGGTCTGTGTCCCACTG +
Preference number: 4 (lower is better)
Translates to: LEYLEQSWHNMAPKISQQLQLEH*GVCVPL
Trigger: CAGTGGGACACAGACCCCTCAGTGCTCCAGCTGCAG...TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGAGATTGGCTCCAGCCTaGACATCCCCATCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWRLAPA*TSPSFS
Trigger: GGAAAAAGATGGGGATGTTCAGGCTGGAGCCAATCT...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR TCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCTCTCCTGTGGAGTTaGGAGCATGTCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADALLWS*EHVQAP
Trigger: TGGAGCCTGGACATGCTCTCAACTCCACAGGAGAGC...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TCACCATGTAAAACACCACGTCTCAAGTCTTTGGCCCTGTACCATAATATGAGGGCTCTCCTGTGGAGTTaGGAGCATGTCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPCKTPRLKSLALYHNMRALLWS*EHVQAP
Trigger: TGGAGCCTGGACATGCTCTCAACTCCACAGGAGAGC...CCTCATATTATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR TCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGCAACCACGAAGTTATTaGCGTCTCCCGTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWQPRSY*RLPLGK
Trigger: CTTTCCCAACGGGAGACGTCAATAACTTCGTGGTTG...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR GCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGCCGGTGAGATACCAATaGTTTGCAGCAAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWPVRYQ*FAAKPL
Trigger: CAGAGGCTTTGCTGCAAAGCATTGGTATCTCACCGG...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR GCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGGAGTCCTTCGATGACTaGGATTGTCCCAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWESFDD*DCPRGQ
Trigger: TTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTC...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR GCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGTGTACACCAGCTCCATaGTCTCCTGTGGAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWCTPAP*SPVELR
Trigger: TCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACA...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR GCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGCAACAGCAACTTCTTTaGCAGCTTGGGCCCAACGAA +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWQQQLL*QLGPNE
Trigger: TTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTG...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp AGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTATTGACATGTTGGTTTCCTaGACGCGCTCGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: STKVLRVLLWWWKHDVFIDMLVS*TRSAAA
Trigger: CGCCGCTGCCGAGCGCGTCCAGGAAACCAACATGTC...AATAAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR CCA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGACATGTTGGTTTCCTaGACGCGCTCGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: HICTQSYLASYGFNRTMPDMLVS*TRSAAA
Trigger: CGCCGCTGCCGAGCGCGTCCAGGAAACCAACATGTC...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGGGACACTACTTCCCTTaGCAGGAAATCCACTTGGGT +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWGHYFP*QEIHLG
Trigger: ACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCC...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGCTCTGTCAACTCTCTTaGAGGGGCTTCCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWLCQLS*RGFLHF
Trigger: GAAGTGAAGGAAGCCCCTCCAAGAGAGTTGACAGAG...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGGGGCTGCAGTGGGGGTaGCTCATTTCCACTAGGCAG +
Preference number: 4 (lower is better)
Translates to: EEHHICTQSYLASYGFNRGLQWG*LISTRQ
Trigger: CTGCCTAGTGGAAATGAGCCACCCCCACTGCAGCCC...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGGTAATCCCAGCACTTTaGGAGGCCAACATAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWVIPAL*EANIGG
Trigger: TCCTCCTATGTTGGCCTCCCAAAGTGCTGGGATTAC...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR TCA 90 bp TTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATGGCCCCAGATCGCCTaGGTCTTGGCTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LEYLEQSWHNMAPKISQQWPQIA*VLASSF
Trigger: GAAGCTGGAAGCCAAGACTCAGGCGATCTGGGGCCA...TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGTGGCCCCAGATCGCCTaGGTCTTGGCTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMWPQIA*VLASSF
Trigger: GAAGCTGGAAGCCAAGACTCAGGCGATCTGGGGCCA...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp ATAAGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTTGGCCCCAGATCGCCTaGGTCTTGGCTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ISTKVLRVLLWWWKHDVFWPQIA*VLASSF
Trigger: GAAGCTGGAAGCCAAGACTCAGGCGATCTGGGGCCA...AAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCTTAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR TCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGACAGTGATGAGGTTATaGGCATTCTGGGTCCCAACA +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWTVMRL*AFWVPT
Trigger: TGTTGGGACCCAGAATGCTCATAACCTCATCACTGT...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR TCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACAGCTCTCCTGTGGAGTTaGGAGCATGTCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTALLWS*EHVQAP
Trigger: TGGAGCCTGGACATGCTCTCAACTCCACAGGAGAGC...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TCACCATGTAAAACACCACGTCTCAAGTCTTTGGCCCTGTACCATAATATGAGGGTCACTGGCCCTTGGTaGCCTTCAAAGACCTCACCA +
Preference number: 4 (lower is better)
Translates to: SPCKTPRLKSLALYHNMRVTGPW*PSKTSP
Trigger: TGGTGAGGTCTTTGAAGGTCACCAAGGGCCAGTGAC...CCTCATATTATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGGAGTCTGACTGCAGCTaGAGCACTGAGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: EEHHICTQSYLASYGFNRESDCS*STEGSV
Trigger: CACAGACCCCTCAGTGCTCCAGCTGCAGTCAGACTC...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGGGCAGGAAATCCACTTaGGTGACCTTTGACACGCCC +
Preference number: 4 (lower is better)
Translates to: GAKLAQYGTQNITAILILGRKST*VTFDTP
Trigger: GGGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCC...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGGCAGGAAATCCACTTaGGTGACCTTTGACACGCCC +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADGRKST*VTFDTP
Trigger: GGGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCC...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCGGGTGTCCGCTGCACTaGAGTCCTTCGATGACTGCG +
Preference number: 4 (lower is better)
Translates to: DTFRILGAKLAQYGTQNIGCPLH*SPSMTA
Trigger: CGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCC...GATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCGGGTGTCCGCTGCACTaGAGTCCTTCGATGACTGCG +
Preference number: 4 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSGCPLH*SPSMTA
Trigger: CGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCC...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACCGGATGCCCCCTCAATaGCCACACTTGCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADRMPPQ*PHLLLE
Trigger: TTCCAACAGCAAGTGTGGCCATTGAGGGGGCATCCG...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TCACCATGTAAAACACCACGTCTCAAGTCTTTGGCCCTGTACCATAATATGAGGCGGATGCCCCCTCAATaGCCACACTTGCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: SPCKTPRLKSLALYHNMRRMPPQ*PHLLLE
Trigger: TTCCAACAGCAAGTGTGGCCATTGAGGGGGCATCCG...CCTCATATTATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGCGGATGCCCCCTCAATaGCCACACTTGCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: GAKLAQYGTQNITAILILRMPPQ*PHLLLE
Trigger: TTCCAACAGCAAGTGTGGCCATTGAGGGGGCATCCG...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAAGGGCTGCAGTGGGGGTaGCTCATTTCCACTAGGCAG +
Preference number: 4 (lower is better)
Translates to: LEYLEQSWHNMAPKISQQGLQWG*LISTRQ
Trigger: CTGCCTAGTGGAAATGAGCCACCCCCACTGCAGCCC...TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTGGCCCCAGATCGCCTaGGTCTTGGCTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: YVELNITSTAAERIQSSHWPQIA*VLASSF
Trigger: GAAGCTGGAAGCCAAGACTCAGGCGATCTGGGGCCA...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR TCA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGCACTTGGGTGACCTTTaGCACGCCCAGTTTATGCAG +
Preference number: 4 (lower is better)
Translates to: GAKLAQYGTQNITAILILHLGDL*HAQFMQ
Trigger: CTGCATAAACTGGGCGTGTCAAAGGTCACCCAAGTG...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGGGAAATCCACTTGGGTaGCCTTTGACACGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: GAKLAQYGTQNITAILILGNPLG*PLTRPV
Trigger: AACTGGGCGTGTCAAAGGTCACCCAAGTGGATTTCC...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGGAAATCCACTTGGGTaGCCTTTGACACGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADGNPLG*PLTRPV
Trigger: AACTGGGCGTGTCAAAGGTCACCCAAGTGGATTTCC...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACACCAGTCCATACAAGTaGCCACTCGATGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADTSPYK*PLDAWT
Trigger: GGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGT...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TCACCATGTAAAACACCACGTCTCAAGTCTTTGGCCCTGTACCATAATATGAGGACCAGTCCATACAAGTaGCCACTCGATGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: SPCKTPRLKSLALYHNMRTSPYK*PLDAWT
Trigger: GGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGT...CCTCATATTATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR TCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACAACTGGAGTCCTTCGATaGCTGCGATTGTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTTGVLR*LRLSQR
Trigger: CCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGT...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCGCTCTCCTGTGGAGTTaGGAGCATGTCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: DTFRILGAKLAQYGTQNIALLWS*EHVQAP
Trigger: TGGAGCCTGGACATGCTCTCAACTCCACAGGAGAGC...GATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATAGCACGGGGGACCACATaGCATCGTACACATAGTCTG +
Preference number: 4 (lower is better)
Translates to: LGAKLAQYGTQNITAILIARGTT*HRTHSL
Trigger: CAGACTATGTGTACGATGTCATGTGGTCCCCCGTGC...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGGCACGGGGGACCACATaGCATCGTACACATAGTCTG +
Preference number: 4 (lower is better)
Translates to: EEHHICTQSYLASYGFNRARGTT*HRTHSL
Trigger: CAGACTATGTGTACGATGTCATGTGGTCCCCCGTGC...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACCTCGGTGTCATTGTTaGGGTTCCAGAGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: LGAKLAQYGTQNITAILIPRCHC*GSRGPS
Trigger: GCTTGGACCTCTGGAACCTCAACAATGACACCGAGG...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGCCTCGGTGTCATTGTTaGGGTTCCAGAGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: EEHHICTQSYLASYGFNRPRCHC*GSRGPS
Trigger: GCTTGGACCTCTGGAACCTCAACAATGACACCGAGG...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGCTTGACTGCAGACGCTaGGCTCTAGGACACAAAGGT +
Preference number: 4 (lower is better)
Translates to: GAKLAQYGTQNITAILILLDCRR*ALGHKG
Trigger: ACCTTTGTGTCCTAGAGCTCAGCGTCTGCAGTCAAG...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATAGGGTCTGTGTCCCACTaGAGGGTCCTTGTTAATGGC +
Preference number: 4 (lower is better)
Translates to: LGAKLAQYGTQNITAILIGSVSH*RVLVNG
Trigger: GCCATTAACAAGGACCCTGCAGTGGGACACAGACCC...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACAGGGTCTGTGTCCCACTaGAGGGTCCTTGTTAATGGC +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTGSVSH*RVLVNG
Trigger: GCCATTAACAAGGACCCTGCAGTGGGACACAGACCC...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGTCGATTGGGCCCACTaGCATGTGGCAGTTAATTCC +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADVDWAH*HVAVNS
Trigger: GGAATTAACTGCCACATGGCAGTGGGCCCAATCGAC...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGGTCGATTGGGCCCACTaGCATGTGGCAGTTAATTCC +
Preference number: 4 (lower is better)
Translates to: GAKLAQYGTQNITAILILVDWAH*HVAVNS
Trigger: GGAATTAACTGCCACATGGCAGTGGGCCCAATCGAC...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACAGCAAAAAGCGCAGGATaGACGGGGGACCACATGACA +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTAKSAG*TGDHMT
Trigger: TGTCATGTGGTCCCCCGTGCATCCTGCGCTTTTTGC...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCGAGTCTGACTGCAGCTaGAGCACTGAGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSESDCS*STEGSV
Trigger: CACAGACCCCTCAGTGCTCCAGCTGCAGTCAGACTC...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGGGCAGGAAATCCACTTaGGTGACCTTTGACACGCCC +
Preference number: 4 (lower is better)
Translates to: EEHHICTQSYLASYGFNRGRKST*VTFDTP
Trigger: GGGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCC...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp AGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCTCAAGGCCACTCCATCTaGTTCATGGGGAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: SNTDTEWTPNTRDLTADAQGHSI*FMGSIF
Trigger: GAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTG...AGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACACCACCAAGTTAGGATaGAAACGGGCGAAGCAGACC +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADTTKLG*KRAKQT
Trigger: GGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGT...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATGGGTGTCCGCTGCACTaGAGTCCTTCGATGACTGCG +
Preference number: 4 (lower is better)
Translates to: YVELNITSTAAERIQSSHGCPLH*SPSMTA
Trigger: CGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCC...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATGGGCTGCAGTGGGGGTaGCTCATTTCCACTAGGCAG +
Preference number: 4 (lower is better)
Translates to: YVELNITSTAAERIQSSHGLQWG*LISTRQ
Trigger: CTGCCTAGTGGAAATGAGCCACCCCCACTGCAGCCC...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR TCA 90 bp AGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCTAGATCAGAGTCGTCCTaGACGGGTTCTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SNTDTEWTPNTRDLTADARSESS*TGSFFC
Trigger: GCAGAAGAAAGAACCCGTTCAGGACGACTCTGATCT...AGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp ATGCAGCACACTACAATAAATAAGGAGCAGCAATGTTCTTCTAGTAAATCCATTCTGCAGCTGGAGCACTaGGGGGTCTGTGTCCCACTG +
Preference number: 4 (lower is better)
Translates to: MQHTTINKEQQCSSSKSILQLEH*GVCVPL
Trigger: CAGTGGGACACAGACCCCTCAGTGCTCCAGCTGCAG...AATGGATTTACTAGAAGAACATTGCTGCTCCTTATTTATTGTAGTGTGCTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324972.10
ENST00000447467.6
CDS-3UTR TCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGCATAGAACTGACGATTaGAAGAAAGATTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWHRTDD*KKDWLQ
Trigger: CTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATG...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR TCA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACCAGTCCATACAAGTaGCCACTCGATGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: EEHHICTQSYLASYGFNRTSPYK*PLDAWT
Trigger: GGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGT...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACTGGAGTCCTTCGATaGCTGCGATTGTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: DTFRILGAKLAQYGTQNITGVLR*LRLSQR
Trigger: CCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGT...GATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGACTGGAGTCCTTCGATaGCTGCGATTGTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQTGVLR*LRLSQR
Trigger: CCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGT...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TGCTATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTACTGGAGTCCTTCGATaGCTGCGATTGTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: CYVELNITSTAAERIQSSTGVLR*LRLSQR
Trigger: CCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGT...AGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR TCA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACAGCTCTCCTGTGGAGTTaGGAGCATGTCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTALLWS*EHVQAP
Trigger: TGGAGCCTGGACATGCTCTCAACTCCACAGGAGAGC...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGTCACTGGCCCTTGGTaGCCTTCAAAGACCTCACCA +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMVTGPW*PSKTSP
Trigger: TGGTGAGGTCTTTGAAGGTCACCAAGGGCCAGTGAC...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATGCACGGGGGACCACATaGCATCGTACACATAGTCTG +
Preference number: 4 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNARGTT*HRTHSL
Trigger: CAGACTATGTGTACGATGTCATGTGGTCCCCCGTGC...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAACCTCGGTGTCATTGTTaGGGTTCCAGAGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: LEYLEQSWHNMAPKISQQPRCHC*GSRGPS
Trigger: GCTTGGACCTCTGGAACCTCAACAATGACACCGAGG...TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATCCTCGGTGTCATTGTTaGGGTTCCAGAGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNPRCHC*GSRGPS
Trigger: GCTTGGACCTCTGGAACCTCAACAATGACACCGAGG...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGCTGTCTCTCGTCGTTTaGGATCCAGATCAGAGTCGT +
Preference number: 4 (lower is better)
Translates to: GAKLAQYGTQNITAILILLSLVV*DPDQSR
Trigger: ACGACTCTGATCTGGATCGCAAACGACGAGAGACAG...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACCTGTCTCTCGTCGTTTaGGATCCAGATCAGAGTCGT +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADLSLVV*DPDQSR
Trigger: ACGACTCTGATCTGGATCGCAAACGACGAGAGACAG...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGCCGGTGAGATACCAATaGTTTGCAGCAAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GAKLAQYGTQNITAILILPVRYQ*FAAKPL
Trigger: CAGAGGCTTTGCTGCAAAGCATTGGTATCTCACCGG...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACAGCTTCACTGGGAGTaGTCACTGATTTCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LGAKLAQYGTQNITAILIQLHWE*SLISRR
Trigger: CCTCCTCGAAATCAGTGAGCACTCCCAGTGAAGCTG...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGCAGCTTCACTGGGAGTaGTCACTGATTTCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EEHHICTQSYLASYGFNRQLHWE*SLISRR
Trigger: CCTCCTCGAAATCAGTGAGCACTCCCAGTGAAGCTG...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGGGTCTGTGTCCCACTaGAGGGTCCTTGTTAATGGC +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMGSVSH*RVLVNG
Trigger: GCCATTAACAAGGACCCTGCAGTGGGACACAGACCC...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCAGTTCTGAGTCTGACTaGAGCTGGAGCACTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSSSESD*SWSTEG
Trigger: CCCCTCAGTGCTCCAGCTGCAGTCAGACTCAGAACT...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAAGTTCTGAGTCTGACTaGAGCTGGAGCACTGAGGGG +
Preference number: 4 (lower is better)
Translates to: HICTQSYLASYGFNRTMPSSESD*SWSTEG
Trigger: CCCCTCAGTGCTCCAGCTGCAGTCAGACTCAGAACT...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp AGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCTGAGTCCTTCGATGACTaGGATTGTCCCAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: SNTDTEWTPNTRDLTADAESFDD*DCPRGQ
Trigger: TTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTC...AGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp AGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCTTGTACACCAGCTCCATaGTCTCCTGTGGAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: SNTDTEWTPNTRDLTADACTPAP*SPVELR
Trigger: TCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACA...AGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACAGTCGATTGGGCCCACTaGCATGTGGCAGTTAATTCC +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTVDWAH*HVAVNS
Trigger: GGAATTAACTGCCACATGGCAGTGGGCCCAATCGAC...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp TGCTATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTGCAAAAAGCGCAGGATaGACGGGGGACCACATGACA +
Preference number: 4 (lower is better)
Translates to: CYVELNITSTAAERIQSSAKSAG*TGDHMT
Trigger: TGTCATGTGGTCCCCCGTGCATCCTGCGCTTTTTGC...AGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGCAAAAAGCGCAGGATaGACGGGGGACCACATGACA +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMAKSAG*TGDHMT
Trigger: TGTCATGTGGTCCCCCGTGCATCCTGCGCTTTTTGC...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGCAAAAAGCGCAGGATaGACGGGGGACCACATGACA +
Preference number: 4 (lower is better)
Translates to: HICTQSYLASYGFNRTMPAKSAG*TGDHMT
Trigger: TGTCATGTGGTCCCCCGTGCATCCTGCGCTTTTTGC...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACTCAATGGCCACACTTaGTGTTGGAACCTCGGTGTC +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTLNGHT*CWNLGV
Trigger: GACACCGAGGTTCCAACAGCAAGTGTGGCCATTGAG...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGGGCAGGAAATCCACTTaGGTGACCTTTGACACGCCC +
Preference number: 4 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQGRKST*VTFDTP
Trigger: GGGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCC...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGGGACACTACTTCCCTTaGCAGGAAATCCACTTGGGT +
Preference number: 4 (lower is better)
Translates to: GAKLAQYGTQNITAILILGHYFP*QEIHLG
Trigger: ACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCC...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TCACCATGTAAAACACCACGTCTCAAGTCTTTGGCCCTGTACCATAATATGAGGCTCTGTCAACTCTCTTaGAGGGGCTTCCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: SPCKTPRLKSLALYHNMRLCQLS*RGFLHF
Trigger: GAAGTGAAGGAAGCCCCTCCAAGAGAGTTGACAGAG...CCTCATATTATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACATCAGCTCAGGGTACTaGAGGGACCAGTCCATACAA +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADISSGY*RDQSIQ
Trigger: TTGTATGGACTGGTCCCTCCAGTACCCTGAGCTGAT...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGATTGACGTCTCCCGTTaGGAAAGCCATTCCGGTAAC +
Preference number: 4 (lower is better)
Translates to: GAKLAQYGTQNITAILILIDVSR*ESHSGN
Trigger: GTTACCGGAATGGCTTTCCCAACGGGAGACGTCAAT...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACATTGACGTCTCCCGTTaGGAAAGCCATTCCGGTAAC +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADIDVSR*ESHSGN
Trigger: GTTACCGGAATGGCTTTCCCAACGGGAGACGTCAAT...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATAGTGAGAAAAGTCGATTaGGCCCACTGCCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: LGAKLAQYGTQNITAILIVRKVD*AHCHVA
Trigger: TGCCACATGGCAGTGGGCCCAATCGACTTTTCTCAC...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAACGGATGCCCCCTCAATaGCCACACTTGCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LEYLEQSWHNMAPKISQQRMPPQ*PHLLLE
Trigger: TTCCAACAGCAAGTGTGGCCATTGAGGGGGCATCCG...TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCGGATGCCCCCTCAATaGCCACACTTGCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQRMPPQ*PHLLLE
Trigger: TTCCAACAGCAAGTGTGGCCATTGAGGGGGCATCCG...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TCACCATGTAAAACACCACGTCTCAAGTCTTTGGCCCTGTACCATAATATGAGGACTTCTTTGCCAGCTTaGGCCCAACGAACACGGTTT +
Preference number: 4 (lower is better)
Translates to: SPCKTPRLKSLALYHNMRTSLPA*AQRTRF
Trigger: AAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGT...CCTCATATTATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR TCA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATAAGATCAGAGTCGTCCTaGACGGGTTCTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LGAKLAQYGTQNITAILIRSESS*TGSFFC
Trigger: GCAGAAGAAAGAACCCGTTCAGGACGACTCTGATCT...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCTGGCCCCAGATCGCCTaGGTCTTGGCTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TATFHIDKRVSSSQTHEIWPQIA*VLASSF
Trigger: GAAGCTGGAAGCCAAGACTCAGGCGATCTGGGGCCA...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR TCA 90 bp TTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAACACTTGGGTGACCTTTaGCACGCCCAGTTTATGCAG +
Preference number: 4 (lower is better)
Translates to: LEYLEQSWHNMAPKISQQHLGDL*HAQFMQ
Trigger: CTGCATAAACTGGGCGTGTCAAAGGTCACCCAAGTG...TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGCACTTGGGTGACCTTTaGCACGCCCAGTTTATGCAG +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMHLGDL*HAQFMQ
Trigger: CTGCATAAACTGGGCGTGTCAAAGGTCACCCAAGTG...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGGATGAGAAATTCCTCTaGATGAAGGATCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWDEKFL*MKDLLF
Trigger: AAACAGCAGATCCTTCATTCAGAGGAATTTCTCATC...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR TCA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATACCAGTCCATACAAGTaGCCACTCGATGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNTSPYK*PLDAWT
Trigger: GGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGT...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAACCAGTCCATACAAGTaGCCACTCGATGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: HICTQSYLASYGFNRTMPTSPYK*PLDAWT
Trigger: GGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGT...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGACATCACAGAGGACTaGCAGTGGAAGACGTATTCT +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADDITED*QWKTYS
Trigger: AGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTC...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACAACCACGAAGTTATTaGCGTCTCCCGTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTQPRSY*RLPLGK
Trigger: CTTTCCCAACGGGAGACGTCAATAACTTCGTGGTTG...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATGTCACTGGCCCTTGGTaGCCTTCAAAGACCTCACCA +
Preference number: 4 (lower is better)
Translates to: YVELNITSTAAERIQSSHVTGPW*PSKTSP
Trigger: TGGTGAGGTCTTTGAAGGTCACCAAGGGCCAGTGAC...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR TCA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACAGCACGGGGGACCACATaGCATCGTACACATAGTCTG +
Preference number: 4 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTARGTT*HRTHSL
Trigger: CAGACTATGTGTACGATGTCATGTGGTCCCCCGTGC...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp AGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCTCCCTGTACCATAATATaGGGAACACCACATCTGCAC +
Preference number: 4 (lower is better)
Translates to: SNTDTEWTPNTRDLTADAPCTII*GTPHLH
Trigger: GTGCAGATGTGGTGTTCCTCATATTATGGTACAGGG...AGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR TCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGTTCATCGCAAACACATaGAATCCTCAATATGTAGGC +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWFIANT*NPQYVG
Trigger: GCCTACATATTGAGGATTTCATGTGTTTGCGATGAA...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR GCA 90 bp AGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCTATCTGTGCTAAGCGCTaGTTTTTGCGCTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: SNTDTEWTPNTRDLTADAICAKR*FLRSSS
Trigger: TGAGCTAGAGCGCAAAAAGCAGCGCTTAGCACAGAT...AGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGCTGTCTCTCGTCGTTTaGGATCCAGATCAGAGTCGT +
Preference number: 4 (lower is better)
Translates to: EEHHICTQSYLASYGFNRLSLVV*DPDQSR
Trigger: ACGACTCTGATCTGGATCGCAAACGACGAGAGACAG...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACCGGTGAGATACCAATaGTTTGCAGCAAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LGAKLAQYGTQNITAILIPVRYQ*FAAKPL
Trigger: CAGAGGCTTTGCTGCAAAGCATTGGTATCTCACCGG...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGCAGCTTCACTGGGAGTaGTCACTGATTTCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMQLHWE*SLISRR
Trigger: CCTCCTCGAAATCAGTGAGCACTCCCAGTGAAGCTG...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp ATAAGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTCAGCTTCACTGGGAGTaGTCACTGATTTCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ISTKVLRVLLWWWKHDVFQLHWE*SLISRR
Trigger: CCTCCTCGAAATCAGTGAGCACTCCCAGTGAAGCTG...AAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR GCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCCAGCTTCACTGGGAGTaGTCACTGATTTCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSQLHWE*SLISRR
Trigger: CCTCCTCGAAATCAGTGAGCACTCCCAGTGAAGCTG...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAGCTTCACTGGGAGTaGTCACTGATTTCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQQLHWE*SLISRR
Trigger: CCTCCTCGAAATCAGTGAGCACTCCCAGTGAAGCTG...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATAGAGTCCTTCGATGACTaGGATTGTCCCAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: LGAKLAQYGTQNITAILIESFDD*DCPRGQ
Trigger: TTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTC...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGACCTCACCAATACCTaGTTTGCTTCCATGACGACA +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADDLTNT*FASMTT
Trigger: TGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGTC...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGGACCTCACCAATACCTaGTTTGCTTCCATGACGACA +
Preference number: 4 (lower is better)
Translates to: GAKLAQYGTQNITAILILDLTNT*FASMTT
Trigger: TGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGTC...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTATGCAGCAAAAAGCGCAGGATaGACGGGGGACCACATGACA +
Preference number: 4 (lower is better)
Translates to: ELNITSTAAERIQSSHYAAKSAG*TGDHMT
Trigger: TGTCATGTGGTCCCCCGTGCATCCTGCGCTTTTTGC...TGCATAATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGCTCAATGGCCACACTTaGTGTTGGAACCTCGGTGTC +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMLNGHT*CWNLGV
Trigger: GACACCGAGGTTCCAACAGCAAGTGTGGCCATTGAG...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGCAACAGCAACTTCTTTaGCAGCTTGGGCCCAACGAA +
Preference number: 4 (lower is better)
Translates to: EEHHICTQSYLASYGFNRQQQLL*QLGPNE
Trigger: TTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTG...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp TCACCATGTAAAACACCACGTCTCAAGTCTTTGGCCCTGTACCATAATATGAGGCAGATAACTCAACAGTaGCTTCCTCCTCGCTATCAG +
Preference number: 4 (lower is better)
Translates to: SPCKTPRLKSLALYHNMRQITQQ*LPPRYQ
Trigger: CTGATAGCGAGGAGGAAGGCACTGTTGAGTTATCTG...CCTCATATTATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGGACACGCCCAGTTTATaGAGTCTTCTTCTTGTTAAT +
Preference number: 4 (lower is better)
Translates to: GTHLSVADITSRHSWAQWDTPSL*SLLLVN
Trigger: ATTAACAAGAAGAAGACTGCATAAACTGGGCGTGTC...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAGAGTCTGACTGCAGCTaGAGCACTGAGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLESDCS*STEGSV
Trigger: CACAGACCCCTCAGTGCTCCAGCTGCAGTCAGACTC...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAGGCAGGAAATCCACTTaGGTGACCTTTGACACGCCC +
Preference number: 4 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLGRKST*VTFDTP
Trigger: GGGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCC...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACTCTGTCAACTCTCTTaGAGGGGCTTCCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTLCQLS*RGFLHF
Trigger: GAAGTGAAGGAAGCCCCTCCAAGAGAGTTGACAGAG...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TGCTATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCAAGGCCACTCCATCTaGTTCATGGGGAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: CYVELNITSTAAERIQSSQGHSI*FMGSIF
Trigger: GAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTG...AGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp GACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCCAAGGCCACTCCATCTaGTTCATGGGGAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: DTFRILGAKLAQYGTQNIQGHSI*FMGSIF
Trigger: GAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTG...GATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAACAAGGCCACTCCATCTaGTTCATGGGGAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: LEYLEQSWHNMAPKISQQQGHSI*FMGSIF
Trigger: GAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTG...TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGACCACCAAGTTAGGATaGAAACGGGCGAAGCAGACC +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMTTKLG*KRAKQT
Trigger: GGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGT...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp ATGCAGCACACTACAATAAATAAGGAGCAGCAATGTTCTTCTAGTAAATCCATTGGGTGTCCGCTGCACTaGAGTCCTTCGATGACTGCG +
Preference number: 4 (lower is better)
Translates to: MQHTTINKEQQCSSSKSIGCPLH*SPSMTA
Trigger: CGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCC...AATGGATTTACTAGAAGAACATTGCTGCTCCTTATTTATTGTAGTGTGCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGATTGACGTCTCCCGTTaGGAAAGCCATTCCGGTAAC +
Preference number: 4 (lower is better)
Translates to: EEHHICTQSYLASYGFNRIDVSR*ESHSGN
Trigger: GTTACCGGAATGGCTTTCCCAACGGGAGACGTCAAT...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGTGAGAAAAGTCGATTaGGCCCACTGCCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: HICTQSYLASYGFNRTMPVRKVD*AHCHVA
Trigger: TGCCACATGGCAGTGGGCCCAATCGACTTTTCTCAC...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATAGGCCACACTTGCTGTTaGAACCTCGGTGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: LGAKLAQYGTQNITAILIGHTCC*NLGVIV
Trigger: AACAATGACACCGAGGTTCCAACAGCAAGTGTGGCC...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACAACTTCTTTGCCAGCTTaGGCCCAACGAACACGGTTT +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTTSLPA*AQRTRF
Trigger: AAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGT...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGAGATCAGAGTCGTCCTaGACGGGTTCTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQRSESS*TGSFFC
Trigger: GCAGAAGAAAGAACCCGTTCAGGACGACTCTGATCT...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp ATAAGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTAGATCAGAGTCGTCCTaGACGGGTTCTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ISTKVLRVLLWWWKHDVFRSESS*TGSFFC
Trigger: GCAGAAGAAAGAACCCGTTCAGGACGACTCTGATCT...AAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR TCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCAGATCAGAGTCGTCCTaGACGGGTTCTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSRSESS*TGSFFC
Trigger: GCAGAAGAAAGAACCCGTTCAGGACGACTCTGATCT...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATGGAAATCCACTTGGGTaGCCTTTGACACGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: YVELNITSTAAERIQSSHGNPLG*PLTRPV
Trigger: AACTGGGCGTGTCAAAGGTCACCCAAGTGGATTTCC...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR TCA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCAGGAAATCCACTTGGGTaGCCTTTGACACGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: THLEYLEQSWHNMAPKISGNPLG*PLTRPV
Trigger: AACTGGGCGTGTCAAAGGTCACCCAAGTGGATTTCC...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGAGATTGGCTCCAGCCTaGACATCCCCATCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQRLAPA*TSPSFS
Trigger: GGAAAAAGATGGGGATGTTCAGGCTGGAGCCAATCT...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAAAGATTGGCTCCAGCCTaGACATCCCCATCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: LEYLEQSWHNMAPKISQQRLAPA*TSPSFS
Trigger: GGAAAAAGATGGGGATGTTCAGGCTGGAGCCAATCT...TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGCAACCACGAAGTTATTaGCGTCTCCCGTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMQPRSY*RLPLGK
Trigger: CTTTCCCAACGGGAGACGTCAATAACTTCGTGGTTG...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAACCACGAAGTTATTaGCGTCTCCCGTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQQPRSY*RLPLGK
Trigger: CTTTCCCAACGGGAGACGTCAATAACTTCGTGGTTG...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAACCGTCACTGGCCCTTGGTaGCCTTCAAAGACCTCACCA +
Preference number: 4 (lower is better)
Translates to: SYGFNRTMPGVHVSTNLTVTGPW*PSKTSP
Trigger: TGGTGAGGTCTTTGAAGGTCACCAAGGGCCAGTGAC...GGTTAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAACCGCACGGGGGACCACATaGCATCGTACACATAGTCTG +
Preference number: 4 (lower is better)
Translates to: SYGFNRTMPGVHVSTNLTARGTT*HRTHSL
Trigger: CAGACTATGTGTACGATGTCATGTGGTCCCCCGTGC...GGTTAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTACTTGACTGCAGACGCTaGGCTCTAGGACACAAAGGT +
Preference number: 4 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLLDCRR*ALGHKG
Trigger: ACCTTTGTGTCCTAGAGCTCAGCGTCTGCAGTCAAG...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACACTTGACTGCAGACGCTaGGCTCTAGGACACAAAGGT +
Preference number: 4 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTLDCRR*ALGHKG
Trigger: ACCTTTGTGTCCTAGAGCTCAGCGTCTGCAGTCAAG...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACTTGACTGCAGACGCTaGGCTCTAGGACACAAAGGT +
Preference number: 4 (lower is better)
Translates to: THLEYLEQSWHNMAPKISLDCRR*ALGHKG
Trigger: ACCTTTGTGTCCTAGAGCTCAGCGTCTGCAGTCAAG...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCGAATACAAGAGACTTaGCTGCAGACGCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQRIQET*LQTLSS
Trigger: AGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCG...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCCTGTACCATAATATaGGGAACACCACATCTGCAC +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTPCTII*GTPHLH
Trigger: GTGCAGATGTGGTGTTCCTCATATTATGGTACAGGG...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR TCA 90 bp ATAAGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTCCCACCACTTTGGGATaGAGAGGGAGGAGAATCATT +
Preference number: 4 (lower is better)
Translates to: ISTKVLRVLLWWWKHDVFPTTLG*RGRRII
Trigger: AATGATTCTCCTCCCTCTTCATCCCAAAGTGGTGGG...AAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR GCA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGCTAAGCGCTGCTTTTTaGGCTCTAGCTCAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: GAKLAQYGTQNITAILILLSAAF*ALAQLL
Trigger: TAAAAGCTGAGCTAGAGCGCAAAAAGCAGCGCTTAG...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp AGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTATTCTGTCTCTCGTCGTTTaGGATCCAGATCAGAGTCGT +
Preference number: 4 (lower is better)
Translates to: STKVLRVLLWWWKHDVFILSLVV*DPDQSR
Trigger: ACGACTCTGATCTGGATCGCAAACGACGAGAGACAG...AATAAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR GCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGCCGGTGAGATACCAATaGTTTGCAGCAAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMPVRYQ*FAAKPL
Trigger: CAGAGGCTTTGCTGCAAAGCATTGGTATCTCACCGG...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp AGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTATTCCGGTGAGATACCAATaGTTTGCAGCAAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: STKVLRVLLWWWKHDVFIPVRYQ*FAAKPL
Trigger: CAGAGGCTTTGCTGCAAAGCATTGGTATCTCACCGG...AATAAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR GCA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCCGGTGAGATACCAATaGTTTGCAGCAAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQPVRYQ*FAAKPL
Trigger: CAGAGGCTTTGCTGCAAAGCATTGGTATCTCACCGG...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAAGTTCTGAGTCTGACTaGAGCTGGAGCACTGAGGGG +
Preference number: 4 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLSSESD*SWSTEG
Trigger: CCCCTCAGTGCTCCAGCTGCAGTCAGACTCAGAACT...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGGACACGCCCAGTTTATaGAGTCTTCTTCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: GAKLAQYGTQNITAILILDTPSL*SLLPSS
Trigger: AGAACTTGGAAGAAGACTGCATAAACTGGGCGTGTC...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACCAAGTGACCACTCGATaGTTGGACCAATGTTCATCA +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADQVTTR*LDQCSS
Trigger: TGATGAACATTGGTCCAAGCATCGAGTGGTCACTTG...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp TCACCATGTAAAACACCACGTCTCAAGTCTTTGGCCCTGTACCATAATATGAGGCAAGTGACCACTCGATaGTTGGACCAATGTTCATCA +
Preference number: 4 (lower is better)
Translates to: SPCKTPRLKSLALYHNMRQVTTR*LDQCSS
Trigger: TGATGAACATTGGTCCAAGCATCGAGTGGTCACTTG...CCTCATATTATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp TTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATGTACACCAGCTCCATaGTCTCCTGTGGAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: LEYLEQSWHNMAPKISQQCTPAP*SPVELR
Trigger: TCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACA...TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTGTACACCAGCTCCATaGTCTCCTGTGGAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNCTPAP*SPVELR
Trigger: TCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACA...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCATGTACACCAGCTCCATaGTCTCCTGTGGAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: HICTQSYLASYGFNRTMPCTPAP*SPVELR
Trigger: TCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACA...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACAGACCTCACCAATACCTaGTTTGCTTCCATGACGACA +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTDLTNT*FASMTT
Trigger: TGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGTC...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAGTCGATTGGGCCCACTaGCATGTGGCAGTTAATTCC +
Preference number: 4 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLVDWAH*HVAVNS
Trigger: GGAATTAACTGCCACATGGCAGTGGGCCCAATCGAC...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTATGCACTCAATGGCCACACTTaGTGTTGGAACCTCGGTGTC +
Preference number: 4 (lower is better)
Translates to: ELNITSTAAERIQSSHYALNGHT*CWNLGV
Trigger: GACACCGAGGTTCCAACAGCAAGTGTGGCCATTGAG...TGCATAATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp TGCTATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCAACAGCAACTTCTTTaGCAGCTTGGGCCCAACGAA +
Preference number: 4 (lower is better)
Translates to: CYVELNITSTAAERIQSSQQQLL*QLGPNE
Trigger: TTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTG...AGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAACAGCAACTTCTTTaGCAGCTTGGGCCCAACGAA +
Preference number: 4 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQQQQLL*QLGPNE
Trigger: TTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTG...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGCAACAGCAACTTCTTTaGCAGCTTGGGCCCAACGAA +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMQQQLL*QLGPNE
Trigger: TTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTG...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGCAGATAACTCAACAGTaGCTTCCTCCTCGCTATCAG +
Preference number: 4 (lower is better)
Translates to: EEHHICTQSYLASYGFNRQITQQ*LPPRYQ
Trigger: CTGATAGCGAGGAGGAAGGCACTGTTGAGTTATCTG...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCATTTTGTCAGACATGTTaGTTTCCTGGACGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: HICTQSYLASYGFNRTMPFCQTC*FPGRAR
Trigger: CCGAGCGCGTCCAGGAAACCAACATGTCTGACAAAA...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp ATAAGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTTTTTGTCAGACATGTTaGTTTCCTGGACGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: ISTKVLRVLLWWWKHDVFFCQTC*FPGRAR
Trigger: CCGAGCGCGTCCAGGAAACCAACATGTCTGACAAAA...AAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCTTAT
44% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR CCA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTTTGTCAGACATGTTaGTTTCCTGGACGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNFCQTC*FPGRAR
Trigger: CCGAGCGCGTCCAGGAAACCAACATGTCTGACAAAA...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGGACACTACTTCCCTTaGCAGGAAATCCACTTGGGT +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMGHYFP*QEIHLG
Trigger: ACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCC...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATGGACACTACTTCCCTTaGCAGGAAATCCACTTGGGT +
Preference number: 4 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNGHYFP*QEIHLG
Trigger: ACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCC...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCGGACACTACTTCCCTTaGCAGGAAATCCACTTGGGT +
Preference number: 4 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSGHYFP*QEIHLG
Trigger: ACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCC...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATATCCAGTTCTGAGTCCTaGCCAACTTTAGATTCCACC +
Preference number: 4 (lower is better)
Translates to: LGAKLAQYGTQNITAILISSSES*PTLDST
Trigger: GGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGA...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCCTCTGTCAACTCTCTTaGAGGGGCTTCCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSLCQLS*RGFLHF
Trigger: GAAGTGAAGGAAGCCCCTCCAAGAGAGTTGACAGAG...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGATCAGCTCAGGGTACTaGAGGGACCAGTCCATACAA +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMISSGY*RDQSIQ
Trigger: TTGTATGGACTGGTCCCTCCAGTACCCTGAGCTGAT...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCATCAGCTCAGGGTACTaGAGGGACCAGTCCATACAA +
Preference number: 4 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSISSGY*RDQSIQ
Trigger: TTGTATGGACTGGTCCCTCCAGTACCCTGAGCTGAT...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATCAAGGCCACTCCATCTaGTTCATGGGGAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: YVELNITSTAAERIQSSHQGHSI*FMGSIF
Trigger: GAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTG...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATATTGACGTCTCCCGTTaGGAAAGCCATTCCGGTAAC +
Preference number: 4 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNIDVSR*ESHSGN
Trigger: GTTACCGGAATGGCTTTCCCAACGGGAGACGTCAAT...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATGTGAGAAAAGTCGATTaGGCCCACTGCCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: YVELNITSTAAERIQSSHVRKVD*AHCHVA
Trigger: TGCCACATGGCAGTGGGCCCAATCGACTTTTCTCAC...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAGTGAGAAAAGTCGATTaGGCCCACTGCCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLVRKVD*AHCHVA
Trigger: TGCCACATGGCAGTGGGCCCAATCGACTTTTCTCAC...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACAGTGAGAAAAGTCGATTaGGCCCACTGCCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTVRKVD*AHCHVA
Trigger: TGCCACATGGCAGTGGGCCCAATCGACTTTTCTCAC...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGCCACACTTGCTGTTaGAACCTCGGTGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: HICTQSYLASYGFNRTMPGHTCC*NLGVIV
Trigger: AACAATGACACCGAGGTTCCAACAGCAAGTGTGGCC...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACTTCTTTGCCAGCTTaGGCCCAACGAACACGGTTT +
Preference number: 4 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSTSLPA*AQRTRF
Trigger: AAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGT...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATACTTCTTTGCCAGCTTaGGCCCAACGAACACGGTTT +
Preference number: 4 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNTSLPA*AQRTRF
Trigger: AAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGT...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACATTTCCACAAGGGTCCTaGCAAATCGGGTCCATTCAT +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTFPQGS*QIGSIH
Trigger: ATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAA...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCAAGATTGGCTCCAGCCTaGACATCCCCATCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: THLEYLEQSWHNMAPKISRLAPA*TSPSFS
Trigger: GGAAAAAGATGGGGATGTTCAGGCTGGAGCCAATCT...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTATGCAAGATTGGCTCCAGCCTaGACATCCCCATCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: ELNITSTAAERIQSSHYARLAPA*TSPSFS
Trigger: GGAAAAAGATGGGGATGTTCAGGCTGGAGCCAATCT...TGCATAATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR TCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCGACATCACAGAGGACTaGCAGTGGAAGACGTATTCT +
Preference number: 4 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSDITED*QWKTYS
Trigger: AGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTC...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCACTGGAGTCCTTCGATaGCTGCGATTGTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TATFHIDKRVSSSQTHEITGVLR*LRLSQR
Trigger: CCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGT...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR TCA 90 bp GACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGTGATGAGGTTATaGGCATTCTGGGTCCCAACA +
Preference number: 4 (lower is better)
Translates to: DTFRILGAKLAQYGTQNITVMRL*AFWVPT
Trigger: TGTTGGGACCCAGAATGCTCATAACCTCATCACTGT...GATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGACAGTGATGAGGTTATaGGCATTCTGGGTCCCAACA +
Preference number: 4 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQTVMRL*AFWVPT
Trigger: TGTTGGGACCCAGAATGCTCATAACCTCATCACTGT...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTATGCACAACCACGAAGTTATTaGCGTCTCCCGTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: ELNITSTAAERIQSSHYAQPRSY*RLPLGK
Trigger: CTTTCCCAACGGGAGACGTCAATAACTTCGTGGTTG...TGCATAATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR TCA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCGTCACTGGCCCTTGGTaGCCTTCAAAGACCTCACCA +
Preference number: 4 (lower is better)
Translates to: TATFHIDKRVSSSQTHEIVTGPW*PSKTSP
Trigger: TGGTGAGGTCTTTGAAGGTCACCAAGGGCCAGTGAC...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR TCA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTGCACGGGGGACCACATaGCATCGTACACATAGTCTG +
Preference number: 4 (lower is better)
Translates to: SSICRHLITKLWIQKTKAARGTT*HRTHSL
Trigger: CAGACTATGTGTACGATGTCATGTGGTCCCCCGTGC...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR TCA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACACGAATACAAGAGACTTaGCTGCAGACGCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTRIQET*LQTLSS
Trigger: AGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCG...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACGAATACAAGAGACTTaGCTGCAGACGCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: THLEYLEQSWHNMAPKISRIQET*LQTLSS
Trigger: AGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCG...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATATCTGTGCTAAGCGCTaGTTTTTGCGCTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNICAKR*FLRSSS
Trigger: TGAGCTAGAGCGCAAAAAGCAGCGCTTAGCACAGAT...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp AGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTATTATCTGTGCTAAGCGCTaGTTTTTGCGCTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: STKVLRVLLWWWKHDVFIICAKR*FLRSSS
Trigger: TGAGCTAGAGCGCAAAAAGCAGCGCTTAGCACAGAT...AATAAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR GCA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACACTGTCTCTCGTCGTTTaGGATCCAGATCAGAGTCGT +
Preference number: 4 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTLSLVV*DPDQSR
Trigger: ACGACTCTGATCTGGATCGCAAACGACGAGAGACAG...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATCCGGTGAGATACCAATaGTTTGCAGCAAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: YVELNITSTAAERIQSSHPVRYQ*FAAKPL
Trigger: CAGAGGCTTTGCTGCAAAGCATTGGTATCTCACCGG...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGGACACGCCCAGTTTATaGAGTCTTCTTCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: EEHHICTQSYLASYGFNRDTPSL*SLLPSS
Trigger: AGAACTTGGAAGAAGACTGCATAAACTGGGCGTGTC...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATGAGTCCTTCGATGACTaGGATTGTCCCAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: YVELNITSTAAERIQSSHESFDD*DCPRGQ
Trigger: TTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTC...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCAGAGTCCTTCGATGACTaGGATTGTCCCAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: THLEYLEQSWHNMAPKISESFDD*DCPRGQ
Trigger: TTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTC...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACATGTACACCAGCTCCATaGTCTCCTGTGGAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTCTPAP*SPVELR
Trigger: TCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACA...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCGACCTCACCAATACCTaGTTTGCTTCCATGACGACA +
Preference number: 4 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSDLTNT*FASMTT
Trigger: TGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGTC...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTACTCAATGGCCACACTTaGTGTTGGAACCTCGGTGTC +
Preference number: 4 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLLNGHT*CWNLGV
Trigger: GACACCGAGGTTCCAACAGCAAGTGTGGCCATTGAG...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCCAGATAACTCAACAGTaGCTTCCTCCTCGCTATCAG +
Preference number: 4 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSQITQQ*LPPRYQ
Trigger: CTGATAGCGAGGAGGAAGGCACTGTTGAGTTATCTG...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAGATAACTCAACAGTaGCTTCCTCCTCGCTATCAG +
Preference number: 4 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQQITQQ*LPPRYQ
Trigger: CTGATAGCGAGGAGGAAGGCACTGTTGAGTTATCTG...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCCAGATAACTCAACAGTaGCTTCCTCCTCGCTATCAG +
Preference number: 4 (lower is better)
Translates to: DTFRILGAKLAQYGTQNIQITQQ*LPPRYQ
Trigger: CTGATAGCGAGGAGGAAGGCACTGTTGAGTTATCTG...GATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACATTTTGTCAGACATGTTaGTTTCCTGGACGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTFCQTC*FPGRAR
Trigger: CCGAGCGCGTCCAGGAAACCAACATGTCTGACAAAA...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTATTTTGTCAGACATGTTaGTTTCCTGGACGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLFCQTC*FPGRAR
Trigger: CCGAGCGCGTCCAGGAAACCAACATGTCTGACAAAA...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCGGCAGGAAATCCACTTaGGTGACCTTTGACACGCCC +
Preference number: 4 (lower is better)
Translates to: TATFHIDKRVSSSQTHEIGRKST*VTFDTP
Trigger: GGGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCC...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp GACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCTCCAGTTCTGAGTCCTaGCCAACTTTAGATTCCACC +
Preference number: 4 (lower is better)
Translates to: DTFRILGAKLAQYGTQNISSSES*PTLDST
Trigger: GGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGA...GATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTACTCTGTCAACTCTCTTaGAGGGGCTTCCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLLCQLS*RGFLHF
Trigger: GAAGTGAAGGAAGCCCCTCCAAGAGAGTTGACAGAG...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACAATCAGCTCAGGGTACTaGAGGGACCAGTCCATACAA +
Preference number: 4 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTISSGY*RDQSIQ
Trigger: TTGTATGGACTGGTCCCTCCAGTACCCTGAGCTGAT...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAACCACCACCAAGTTAGGATaGAAACGGGCGAAGCAGACC +
Preference number: 4 (lower is better)
Translates to: SYGFNRTMPGVHVSTNLTTTKLG*KRAKQT
Trigger: GGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGT...GGTTAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATATTGACGTCTCCCGTTaGGAAAGCCATTCCGGTAAC +
Preference number: 4 (lower is better)
Translates to: YVELNITSTAAERIQSSHIDVSR*ESHSGN
Trigger: GTTACCGGAATGGCTTTCCCAACGGGAGACGTCAAT...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAGGCCACACTTGCTGTTaGAACCTCGGTGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLGHTCC*NLGVIV
Trigger: AACAATGACACCGAGGTTCCAACAGCAAGTGTGGCC...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCAGGCCACACTTGCTGTTaGAACCTCGGTGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: THLEYLEQSWHNMAPKISGHTCC*NLGVIV
Trigger: AACAATGACACCGAGGTTCCAACAGCAAGTGTGGCC...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATTTCCACAAGGGTCCTaGCAAATCGGGTCCATTCAT +
Preference number: 4 (lower is better)
Translates to: LEYLEQSWHNMAPKISQQFPQGS*QIGSIH
Trigger: ATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAA...TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCTTTCCACAAGGGTCCTaGCAAATCGGGTCCATTCAT +
Preference number: 4 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSFPQGS*QIGSIH
Trigger: ATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAA...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp AGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCTAAAGCTGGCACAATATaGCACCCAAAATATCACAGC +
Preference number: 4 (lower is better)
Translates to: SNTDTEWTPNTRDLTADAKAGTI*HPKYHS
Trigger: GCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTT...AGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATATACTTGGAGCAAAGCTaGCACAATATGGCACCCAAA +
Preference number: 4 (lower is better)
Translates to: LGAKLAQYGTQNITAILIYLEQS*HNMAPK
Trigger: TTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTA...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
3UTR CAA 72 bp GTCAGTGGAAAGCATGATGGGACACATTTAGAATACTaGGAGCAAAGCTGGCACAATATGGCACCCAAAATA +
Preference number: 4 (lower is better)
Translates to: VSGKHDGTHLEY*EQSWHNMAPKI
Trigger: TATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTCCCATCATGCTTTCCACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTCACTTGGGTGACCTTTaGCACGCCCAGTTTATGCAG +
Preference number: 4 (lower is better)
Translates to: SSICRHLITKLWIQKTKAHLGDL*HAQFMQ
Trigger: CTGCATAAACTGGGCGTGTCAAAGGTCACCCAAGTG...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR TCA 90 bp ATGCAGCACACTACAATAAATAAGGAGCAGCAATGTTCTTCTAGTAAATCCATTGGAAATCCACTTGGGTaGCCTTTGACACGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: MQHTTINKEQQCSSSKSIGNPLG*PLTRPV
Trigger: AACTGGGCGTGTCAAAGGTCACCCAAGTGGATTTCC...AATGGATTTACTAGAAGAACATTGCTGCTCCTTATTTATTGTAGTGTGCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR TCA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCGGAAATCCACTTGGGTaGCCTTTGACACGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: TATFHIDKRVSSSQTHEIGNPLG*PLTRPV
Trigger: AACTGGGCGTGTCAAAGGTCACCCAAGTGGATTTCC...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR TCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGATGAGAAATTCCTCTaGATGAAGGATCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADDEKFL*MKDLLF
Trigger: AAACAGCAGATCCTTCATTCAGAGGAATTTCTCATC...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp AGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCTGATGAGAAATTCCTCTaGATGAAGGATCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SNTDTEWTPNTRDLTADADEKFL*MKDLLF
Trigger: AAACAGCAGATCCTTCATTCAGAGGAATTTCTCATC...AGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGCATAGAACTGACGATTaGAAGAAAGATTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: EEHHICTQSYLASYGFNRHRTDD*KKDWLQ
Trigger: CTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATG...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACAGACATCACAGAGGACTaGCAGTGGAAGACGTATTCT +
Preference number: 4 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTDITED*QWKTYS
Trigger: AGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTC...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCAACAGTGATGAGGTTATaGGCATTCTGGGTCCCAACA +
Preference number: 4 (lower is better)
Translates to: THLEYLEQSWHNMAPKISTVMRL*AFWVPT
Trigger: TGTTGGGACCCAGAATGCTCATAACCTCATCACTGT...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTACAACCACGAAGTTATTaGCGTCTCCCGTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLQPRSY*RLPLGK
Trigger: CTTTCCCAACGGGAGACGTCAATAACTTCGTGGTTG...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTACGAATACAAGAGACTTaGCTGCAGACGCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLRIQET*LQTLSS
Trigger: AGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCG...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTACCCTGTACCATAATATaGGGAACACCACATCTGCAC +
Preference number: 4 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLPCTII*GTPHLH
Trigger: GTGCAGATGTGGTGTTCCTCATATTATGGTACAGGG...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp TGCTATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCTAAGCGCTGCTTTTTaGGCTCTAGCTCAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: CYVELNITSTAAERIQSSLSAAF*ALAQLL
Trigger: TAAAAGCTGAGCTAGAGCGCAAAAAGCAGCGCTTAG...AGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp AGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTATTCTAAGCGCTGCTTTTTaGGCTCTAGCTCAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: STKVLRVLLWWWKHDVFILSAAF*ALAQLL
Trigger: TAAAAGCTGAGCTAGAGCGCAAAAAGCAGCGCTTAG...AATAAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR GCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCCTAAGCGCTGCTTTTTaGGCTCTAGCTCAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSLSAAF*ALAQLL
Trigger: TAAAAGCTGAGCTAGAGCGCAAAAAGCAGCGCTTAG...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATCTGTGCTAAGCGCTaGTTTTTGCGCTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLICAKR*FLRSSS
Trigger: TGAGCTAGAGCGCAAAAAGCAGCGCTTAGCACAGAT...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGAGATACCAATGCTTTaGAGCAAAGCCTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMEIPML*SKASVS
Trigger: AGAGACAGAGGCTTTGCTGCAAAGCATTGGTATCTC...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp ATAAGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTGAGATACCAATGCTTTaGAGCAAAGCCTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: ISTKVLRVLLWWWKHDVFEIPML*SKASVS
Trigger: AGAGACAGAGGCTTTGCTGCAAAGCATTGGTATCTC...AAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR GCA 90 bp GACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCGAGATACCAATGCTTTaGAGCAAAGCCTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: DTFRILGAKLAQYGTQNIEIPML*SKASVS
Trigger: AGAGACAGAGGCTTTGCTGCAAAGCATTGGTATCTC...GATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCCAGCTTCACTGGGAGTaGTCACTGATTTCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TATFHIDKRVSSSQTHEIQLHWE*SLISRR
Trigger: CCTCCTCGAAATCAGTGAGCACTCCCAGTGAAGCTG...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR GCA 90 bp GACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCCAAGTGACCACTCGATaGTTGGACCAATGTTCATCA +
Preference number: 4 (lower is better)
Translates to: DTFRILGAKLAQYGTQNIQVTTR*LDQCSS
Trigger: TGATGAACATTGGTCCAAGCATCGAGTGGTCACTTG...GATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGCAAGTGACCACTCGATaGTTGGACCAATGTTCATCA +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMQVTTR*LDQCSS
Trigger: TGATGAACATTGGTCCAAGCATCGAGTGGTCACTTG...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp TCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAACCGAGTCCTTCGATGACTaGGATTGTCCCAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: SYGFNRTMPGVHVSTNLTESFDD*DCPRGQ
Trigger: TTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTC...GGTTAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAGACCTCACCAATACCTaGTTTGCTTCCATGACGACA +
Preference number: 4 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLDLTNT*FASMTT
Trigger: TGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGTC...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp ATGCAGCACACTACAATAAATAAGGAGCAGCAATGTTCTTCTAGTAAATCCATTCTCAATGGCCACACTTaGTGTTGGAACCTCGGTGTC +
Preference number: 4 (lower is better)
Translates to: MQHTTINKEQQCSSSKSILNGHT*CWNLGV
Trigger: GACACCGAGGTTCCAACAGCAAGTGTGGCCATTGAG...AATGGATTTACTAGAAGAACATTGCTGCTCCTTATTTATTGTAGTGTGCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTCTCAATGGCCACACTTaGTGTTGGAACCTCGGTGTC +
Preference number: 4 (lower is better)
Translates to: SSICRHLITKLWIQKTKALNGHT*CWNLGV
Trigger: GACACCGAGGTTCCAACAGCAAGTGTGGCCATTGAG...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR GCA 90 bp TCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAACCCAACAGCAACTTCTTTaGCAGCTTGGGCCCAACGAA +
Preference number: 4 (lower is better)
Translates to: SYGFNRTMPGVHVSTNLTQQQLL*QLGPNE
Trigger: TTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTG...GGTTAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTCCAGTTCTGAGTCCTaGCCAACTTTAGATTCCACC +
Preference number: 4 (lower is better)
Translates to: YVELNITSTAAERIQSSHSSSES*PTLDST
Trigger: GGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGA...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp GAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTATGCATCCAGTTCTGAGTCCTaGCCAACTTTAGATTCCACC +
Preference number: 4 (lower is better)
Translates to: ELNITSTAAERIQSSHYASSSES*PTLDST
Trigger: GGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGA...TGCATAATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAATCAGCTCAGGGTACTaGAGGGACCAGTCCATACAA +
Preference number: 4 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLISSGY*RDQSIQ
Trigger: TTGTATGGACTGGTCCCTCCAGTACCCTGAGCTGAT...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTCAAGGCCACTCCATCTaGTTCATGGGGAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: SSICRHLITKLWIQKTKAQGHSI*FMGSIF
Trigger: GAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTG...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp ATGCAGCACACTACAATAAATAAGGAGCAGCAATGTTCTTCTAGTAAATCCATTACCACCAAGTTAGGATaGAAACGGGCGAAGCAGACC +
Preference number: 4 (lower is better)
Translates to: MQHTTINKEQQCSSSKSITTKLG*KRAKQT
Trigger: GGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGT...AATGGATTTACTAGAAGAACATTGCTGCTCCTTATTTATTGTAGTGTGCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTACCACCAAGTTAGGATaGAAACGGGCGAAGCAGACC +
Preference number: 4 (lower is better)
Translates to: SSICRHLITKLWIQKTKATTKLG*KRAKQT
Trigger: GGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGT...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp TCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAACCGGCCACACTTGCTGTTaGAACCTCGGTGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: SYGFNRTMPGVHVSTNLTGHTCC*NLGVIV
Trigger: AACAATGACACCGAGGTTCCAACAGCAAGTGTGGCC...GGTTAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTATTTCCACAAGGGTCCTaGCAAATCGGGTCCATTCAT +
Preference number: 4 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLFPQGS*QIGSIH
Trigger: ATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAA...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTATGCATTTCCACAAGGGTCCTaGCAAATCGGGTCCATTCAT +
Preference number: 4 (lower is better)
Translates to: ELNITSTAAERIQSSHYAFPQGS*QIGSIH
Trigger: ATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAA...TGCATAATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGAAAGCTGGCACAATATaGCACCCAAAATATCACAGC +
Preference number: 4 (lower is better)
Translates to: EEHHICTQSYLASYGFNRKAGTI*HPKYHS
Trigger: GCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTT...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATAAAAGCTGGCACAATATaGCACCCAAAATATCACAGC +
Preference number: 4 (lower is better)
Translates to: LGAKLAQYGTQNITAILIKAGTI*HPKYHS
Trigger: GCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTT...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACAAAAGCTGGCACAATATaGCACCCAAAATATCACAGC +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTKAGTI*HPKYHS
Trigger: GCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTT...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TGCTATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTTACTTGGAGCAAAGCTaGCACAATATGGCACCCAAA +
Preference number: 4 (lower is better)
Translates to: CYVELNITSTAAERIQSSYLEQS*HNMAPK
Trigger: TTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTA...AGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp TTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTTGGAGCAAAGCTaGCACAATATGGCACCCAAA +
Preference number: 4 (lower is better)
Translates to: LEYLEQSWHNMAPKISQQYLEQS*HNMAPK
Trigger: TTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTA...TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACTGTCTTCAGTGGAACTaGCATACTGTAATTGCTATG +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADCLQWN*HTVIAM
Trigger: CATAGCAATTACAGTATGCCAGTTCCACTGAAGACA...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTACAAGCAGGCATAGCTaGGCACAGTGGCTCATGTCT +
Preference number: 4 (lower is better)
Translates to: SSICRHLITKLWIQKTKATSRHS*AQWLMS
Trigger: AGACATGAGCCACTGTGCCCAGCTATGCCTGCTTGT...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR TCA 90 bp AGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCTAGAAATTCCTCTGAATaGAGGATCTGCTGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SNTDTEWTPNTRDLTADARNSSE*RICCFS
Trigger: AGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCT...AGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCCATAGAACTGACGATTaGAAGAAAGATTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: DTFRILGAKLAQYGTQNIHRTDD*KKDWLQ
Trigger: CTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATG...GATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGCATAGAACTGACGATTaGAAGAAAGATTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMHRTDD*KKDWLQ
Trigger: CTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATG...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAGACATCACAGAGGACTaGCAGTGGAAGACGTATTCT +
Preference number: 4 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLDITED*QWKTYS
Trigger: AGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTC...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAACAGTGATGAGGTTATaGGCATTCTGGGTCCCAACA +
Preference number: 4 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLTVMRL*AFWVPT
Trigger: TGTTGGGACCCAGAATGCTCATAACCTCATCACTGT...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTACCCTGTACCATAATATaGGGAACACCACATCTGCAC +
Preference number: 4 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLPCTII*GTPHLH
Trigger: GTGCAGATGTGGTGTTCCTCATATTATGGTACAGGG...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTCTGTCTCTCGTCGTTTaGGATCCAGATCAGAGTCGT +
Preference number: 4 (lower is better)
Translates to: SSICRHLITKLWIQKTKALSLVV*DPDQSR
Trigger: ACGACTCTGATCTGGATCGCAAACGACGAGAGACAG...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR GCA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACAGAGATACCAATGCTTTaGAGCAAAGCCTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTEIPML*SKASVS
Trigger: AGAGACAGAGGCTTTGCTGCAAAGCATTGGTATCTC...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCAGAGATACCAATGCTTTaGAGCAAAGCCTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: THLEYLEQSWHNMAPKISEIPML*SKASVS
Trigger: AGAGACAGAGGCTTTGCTGCAAAGCATTGGTATCTC...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACACAAGTGACCACTCGATaGTTGGACCAATGTTCATCA +
Preference number: 4 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTQVTTR*LDQCSS
Trigger: TGATGAACATTGGTCCAAGCATCGAGTGGTCACTTG...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACAACAGTCCTCTCATTATaGACATGCTCTAGGATCATT +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTTVLSL*TCSRII
Trigger: AATGATCCTAGAGCATGTGCATAATGAGAGGACTGT...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCTTTTGTCAGACATGTTaGTTTCCTGGACGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: TATFHIDKRVSSSQTHEIFCQTC*FPGRAR
Trigger: CCGAGCGCGTCCAGGAAACCAACATGTCTGACAAAA...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTATCCAGTTCTGAGTCCTaGCCAACTTTAGATTCCACC +
Preference number: 4 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLSSSES*PTLDST
Trigger: GGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGA...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTATCAGCTCAGGGTACTaGAGGGACCAGTCCATACAA +
Preference number: 4 (lower is better)
Translates to: SSICRHLITKLWIQKTKAISSGY*RDQSIQ
Trigger: TTGTATGGACTGGTCCCTCCAGTACCCTGAGCTGAT...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGGTGGAAGACGTATTCTaGTGTGGTTTTCTTAAACTT +
Preference number: 4 (lower is better)
Translates to: GAKLAQYGTQNITAILILVEDVF*CGFLKL
Trigger: AAGTTTAAGAAAACCACACCAGAATACGTCTTCCAC...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCATTGACGTCTCCCGTTaGGAAAGCCATTCCGGTAAC +
Preference number: 4 (lower is better)
Translates to: TATFHIDKRVSSSQTHEIIDVSR*ESHSGN
Trigger: GTTACCGGAATGGCTTTCCCAACGGGAGACGTCAAT...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTGGCCACACTTGCTGTTaGAACCTCGGTGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: SSICRHLITKLWIQKTKAGHTCC*NLGVIV
Trigger: AACAATGACACCGAGGTTCCAACAGCAAGTGTGGCC...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp ATGCAGCACACTACAATAAATAAGGAGCAGCAATGTTCTTCTAGTAAATCCATTACTTCTTTGCCAGCTTaGGCCCAACGAACACGGTTT +
Preference number: 4 (lower is better)
Translates to: MQHTTINKEQQCSSSKSITSLPA*AQRTRF
Trigger: AAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGT...AATGGATTTACTAGAAGAACATTGCTGCTCCTTATTTATTGTAGTGTGCTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTACTTCTTTGCCAGCTTaGGCCCAACGAACACGGTTT +
Preference number: 4 (lower is better)
Translates to: SSICRHLITKLWIQKTKATSLPA*AQRTRF
Trigger: AAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGT...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGTGCTGTGGTGAATTTTaGGTCAGTGGAAAGCATGAT +
Preference number: 4 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQCCGEF*VSGKHD
Trigger: ATCATGCTTTCCACTGACCCAAAATTCACCACAGCA...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATATGTCTTCAGTGGAACTaGCATACTGTAATTGCTATG +
Preference number: 4 (lower is better)
Translates to: LGAKLAQYGTQNITAILICLQWN*HTVIAM
Trigger: CATAGCAATTACAGTATGCCAGTTCCACTGAAGACA...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp ATAAGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTCTAAGAGTGCTACTCTaGTGGTGGAAACATGATGTT +
Preference number: 4 (lower is better)
Translates to: ISTKVLRVLLWWWKHDVFLRVLL*WWKHDV
Trigger: AACATCATGTTTCCACCACCAGAGTAGCACTCTTAG...AAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR TCA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGGATGAGAAATTCCTCTaGATGAAGGATCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQDEKFL*MKDLLF
Trigger: AAACAGCAGATCCTTCATTCAGAGGAATTTCTCATC...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATGAGAAATTCCTCTaGATGAAGGATCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMDEKFL*MKDLLF
Trigger: AAACAGCAGATCCTTCATTCAGAGGAATTTCTCATC...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACACATAGAACTGACGATTaGAAGAAAGATTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTHRTDD*KKDWLQ
Trigger: CTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATG...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACATAGAACTGACGATTaGAAGAAAGATTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: THLEYLEQSWHNMAPKISHRTDD*KKDWLQ
Trigger: CTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATG...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTGACATCACAGAGGACTaGCAGTGGAAGACGTATTCT +
Preference number: 4 (lower is better)
Translates to: SSICRHLITKLWIQKTKADITED*QWKTYS
Trigger: AGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTC...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR TCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACAAGTCAAATGATGATGTaGCAAACAGGTGAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTSQMMM*QTGEKS
Trigger: ACTTTTCTCACCTGTTTGTCACATCATCATTTGACT...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp ATGCAGCACACTACAATAAATAAGGAGCAGCAATGTTCTTCTAGTAAATCCATTATCTGTGCTAAGCGCTaGTTTTTGCGCTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: MQHTTINKEQQCSSSKSIICAKR*FLRSSS
Trigger: TGAGCTAGAGCGCAAAAAGCAGCGCTTAGCACAGAT...AATGGATTTACTAGAAGAACATTGCTGCTCCTTATTTATTGTAGTGTGCTGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCATCTGTGCTAAGCGCTaGTTTTTGCGCTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: TATFHIDKRVSSSQTHEIICAKR*FLRSSS
Trigger: TGAGCTAGAGCGCAAAAAGCAGCGCTTAGCACAGAT...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR GCA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTGACCTCACCAATACCTaGTTTGCTTCCATGACGACA +
Preference number: 4 (lower is better)
Translates to: SSICRHLITKLWIQKTKADLTNT*FASMTT
Trigger: TGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGTC...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR GCA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATACAGTCCTCTCATTATaGACATGCTCTAGGATCATT +
Preference number: 4 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNTVLSL*TCSRII
Trigger: AATGATCCTAGAGCATGTGCATAATGAGAGGACTGT...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAGTCCTCTCATTATaGACATGCTCTAGGATCATT +
Preference number: 4 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSTVLSL*TCSRII
Trigger: AATGATCCTAGAGCATGTGCATAATGAGAGGACTGT...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp TTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAAGACACGCCCAGTTTATaGAGTCTTCTTCTTGTTAAT +
Preference number: 4 (lower is better)
Translates to: LEYLEQSWHNMAPKISQQDTPSL*SLLLVN
Trigger: ATTAACAAGAAGAAGACTGCATAAACTGGGCGTGTC...TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359388.8
ENST00000437599.5
CDS-3UTR CCA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCTCCAGTTCTGAGTCCTaGCCAACTTTAGATTCCACC +
Preference number: 4 (lower is better)
Translates to: TATFHIDKRVSSSQTHEISSSES*PTLDST
Trigger: GGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGA...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACAGTGGAAGACGTATTCTaGTGTGGTTTTCTTAAACTT +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTVEDVF*CGFLKL
Trigger: AAGTTTAAGAAAACCACACCAGAATACGTCTTCCAC...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGGTGGAAGACGTATTCTaGTGTGGTTTTCTTAAACTT +
Preference number: 4 (lower is better)
Translates to: EEHHICTQSYLASYGFNRVEDVF*CGFLKL
Trigger: AAGTTTAAGAAAACCACACCAGAATACGTCTTCCAC...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACAAATACTGATACTGAATaGACACCGAATACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTNTDTE*TPNTRD
Trigger: GTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATT...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAAAAGCTGGCACAATATaGCACCCAAAATATCACAGC +
Preference number: 4 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLKAGTI*HPKYHS
Trigger: GCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTT...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACATGCTGTGGTGAATTTTaGGTCAGTGGAAAGCATGAT +
Preference number: 4 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTCCGEF*VSGKHD
Trigger: ATCATGCTTTCCACTGACCCAAAATTCACCACAGCA...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTGCTGTGGTGAATTTTaGGTCAGTGGAAAGCATGAT +
Preference number: 4 (lower is better)
Translates to: YVELNITSTAAERIQSSHCCGEF*VSGKHD
Trigger: ATCATGCTTTCCACTGACCCAAAATTCACCACAGCA...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCACCCAATCATATCTaGCTTCATATGGATTTAATA +
Preference number: 4 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADAPNHI*LHMDLI
Trigger: TATTAAATCCATATGAAGCCAGATATGATTGGGTGC...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTGTCTTCAGTGGAACTaGCATACTGTAATTGCTATG +
Preference number: 4 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNCLQWN*HTVIAM
Trigger: CATAGCAATTACAGTATGCCAGTTCCACTGAAGACA...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp AGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTATTAGAGTGCTACTCTGGTaGTGGAAACATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: STKVLRVLLWWWKHDVFIRVLLW*WKHDVF
Trigger: AAAAACATCATGTTTCCACCACCAGAGTAGCACTCT...AATAAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR TCA 90 bp TGCTATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTAGAAATTCCTCTGAATaGAGGATCTGCTGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: CYVELNITSTAAERIQSSRNSSE*RICCFS
Trigger: AGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCT...AGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR TCA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAAGTCAAATGATGATGTaGCAAACAGGTGAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: HICTQSYLASYGFNRTMPSQMMM*QTGEKS
Trigger: ACTTTTCTCACCTGTTTGTCACATCATCATTTGACT...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp ATGCAGCACACTACAATAAATAAGGAGCAGCAATGTTCTTCTAGTAAATCCATTCTAAGCGCTGCTTTTTaGGCTCTAGCTCAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: MQHTTINKEQQCSSSKSILSAAF*ALAQLL
Trigger: TAAAAGCTGAGCTAGAGCGCAAAAAGCAGCGCTTAG...AATGGATTTACTAGAAGAACATTGCTGCTCCTTATTTATTGTAGTGTGCTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCCTAAGCGCTGCTTTTTaGGCTCTAGCTCAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: TATFHIDKRVSSSQTHEILSAAF*ALAQLL
Trigger: TAAAAGCTGAGCTAGAGCGCAAAAAGCAGCGCTTAG...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR GCA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCGAGATACCAATGCTTTaGAGCAAAGCCTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: TATFHIDKRVSSSQTHEIEIPML*SKASVS
Trigger: AGAGACAGAGGCTTTGCTGCAAAGCATTGGTATCTC...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR GCA 90 bp ATGCAGCACACTACAATAAATAAGGAGCAGCAATGTTCTTCTAGTAAATCCATTGACACGCCCAGTTTATaGAGTCTTCTTCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: MQHTTINKEQQCSSSKSIDTPSL*SLLPSS
Trigger: AGAACTTGGAAGAAGACTGCATAAACTGGGCGTGTC...AATGGATTTACTAGAAGAACATTGCTGCTCCTTATTTATTGTAGTGTGCTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324972.10
ENST00000447467.6
CDS-3UTR GCA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCCAAGTGACCACTCGATaGTTGGACCAATGTTCATCA +
Preference number: 4 (lower is better)
Translates to: TATFHIDKRVSSSQTHEIQVTTR*LDQCSS
Trigger: TGATGAACATTGGTCCAAGCATCGAGTGGTCACTTG...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp TGCTATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTGTGGAAGACGTATTCTaGTGTGGTTTTCTTAAACTT +
Preference number: 4 (lower is better)
Translates to: CYVELNITSTAAERIQSSVEDVF*CGFLKL
Trigger: AAGTTTAAGAAAACCACACCAGAATACGTCTTCCAC...AGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAAATACTGATACTGAATaGACACCGAATACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: HICTQSYLASYGFNRTMPNTDTE*TPNTRD
Trigger: GTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATT...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGAATACTGATACTGAATaGACACCGAATACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQNTDTE*TPNTRD
Trigger: GTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATT...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGGCACCCAATCATATCTaGCTTCATATGGATTTAATA +
Preference number: 4 (lower is better)
Translates to: EEHHICTQSYLASYGFNRAPNHI*LHMDLI
Trigger: TATTAAATCCATATGAAGCCAGATATGATTGGGTGC...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTATGCATGTCTTCAGTGGAACTaGCATACTGTAATTGCTATG +
Preference number: 4 (lower is better)
Translates to: ELNITSTAAERIQSSHYACLQWN*HTVIAM
Trigger: CATAGCAATTACAGTATGCCAGTTCCACTGAAGACA...TGCATAATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp ATAAGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTGTGCTACTCTGGTGGTaGAAACATGATGTTTTTATT +
Preference number: 4 (lower is better)
Translates to: ISTKVLRVLLWWWKHDVFVLLWW*KHDVFI
Trigger: AATAAAAACATCATGTTTCCACCACCAGAGTAGCAC...AAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR CCA 90 bp ATAAGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTACTACAGGATTTTATTaGGGCCAATTGGGGAAATTT +
Preference number: 4 (lower is better)
Translates to: ISTKVLRVLLWWWKHDVFTTGFY*GQLGKF
Trigger: AAATTTCCCCAATTGGCCCCAATAAAATCCTGTAGT...AAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR TCA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAAGTCAAATGATGATGTaGCAAACAGGTGAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLSQMMM*QTGEKS
Trigger: ACTTTTCTCACCTGTTTGTCACATCATCATTTGACT...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACAAGTCAAATGATGATGTaGCAAACAGGTGAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTSQMMM*QTGEKS
Trigger: ACTTTTCTCACCTGTTTGTCACATCATCATTTGACT...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATAGTCAAATGATGATGTaGCAAACAGGTGAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: YVELNITSTAAERIQSSHSQMMM*QTGEKS
Trigger: ACTTTTCTCACCTGTTTGTCACATCATCATTTGACT...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR GCA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAACAGTCCTCTCATTATaGACATGCTCTAGGATCATT +
Preference number: 4 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLTVLSL*TCSRII
Trigger: AATGATCCTAGAGCATGTGCATAATGAGAGGACTGT...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAAATACTGATACTGAATaGACACCGAATACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLNTDTE*TPNTRD
Trigger: GTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATT...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp ATGCAGCACACTACAATAAATAAGGAGCAGCAATGTTCTTCTAGTAAATCCATTTGCTGTGGTGAATTTTaGGTCAGTGGAAAGCATGAT +
Preference number: 4 (lower is better)
Translates to: MQHTTINKEQQCSSSKSICCGEF*VSGKHD
Trigger: ATCATGCTTTCCACTGACCCAAAATTCACCACAGCA...AATGGATTTACTAGAAGAACATTGCTGCTCCTTATTTATTGTAGTGTGCTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGATTTCATGTCTTCAGTaGAACTGGCATACTGTAATT +
Preference number: 4 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQISCLQ*NWHTVI
Trigger: AATTACAGTATGCCAGTTCCACTGAAGACATGAAAT...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp TGCTATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTATTTCATGTCTTCAGTaGAACTGGCATACTGTAATT +
Preference number: 4 (lower is better)
Translates to: CYVELNITSTAAERIQSSISCLQ*NWHTVI
Trigger: AATTACAGTATGCCAGTTCCACTGAAGACATGAAAT...AGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCATTTCATGTCTTCAGTaGAACTGGCATACTGTAATT +
Preference number: 4 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSISCLQ*NWHTVI
Trigger: AATTACAGTATGCCAGTTCCACTGAAGACATGAAAT...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR TCA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAAGAAATTCCTCTGAATaGAGGATCTGCTGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLRNSSE*RICCFS
Trigger: AGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCT...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR GCA 90 bp ATGCAGCACACTACAATAAATAAGGAGCAGCAATGTTCTTCTAGTAAATCCATTGACACGCCCAGTTTATaGAGTCTTCTTCTTGTTAAT +
Preference number: 4 (lower is better)
Translates to: MQHTTINKEQQCSSSKSIDTPSL*SLLLVN
Trigger: ATTAACAAGAAGAAGACTGCATAAACTGGGCGTGTC...AATGGATTTACTAGAAGAACATTGCTGCTCCTTATTTATTGTAGTGTGCTGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359388.8
ENST00000437599.5
CDS-3UTR CCA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAAATACTGATACTGAATaGACACCGAATACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLNTDTE*TPNTRD
Trigger: GTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATT...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CCA 90 bp GAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTATGCAGCACCCAATCATATCTaGCTTCATATGGATTTAATA +
Preference number: 4 (lower is better)
Translates to: ELNITSTAAERIQSSHYAAPNHI*LHMDLI
Trigger: TATTAAATCCATATGAAGCCAGATATGATTGGGTGC...TGCATAATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAGCACCCAATCATATCTaGCTTCATATGGATTTAATA +
Preference number: 4 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLAPNHI*LHMDLI
Trigger: TATTAAATCCATATGAAGCCAGATATGATTGGGTGC...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR TCA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTAGAAATTCCTCTGAATaGAGGATCTGCTGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SSICRHLITKLWIQKTKARNSSE*RICCFS
Trigger: AGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCT...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR TCA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTAGTCAAATGATGATGTaGCAAACAGGTGAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: SSICRHLITKLWIQKTKASQMMM*QTGEKS
Trigger: ACTTTTCTCACCTGTTTGTCACATCATCATTTGACT...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp ATGCAGCACACTACAATAAATAAGGAGCAGCAATGTTCTTCTAGTAAATCCATTGTGGAAGACGTATTCTaGTGTGGTTTTCTTAAACTT +
Preference number: 4 (lower is better)
Translates to: MQHTTINKEQQCSSSKSIVEDVF*CGFLKL
Trigger: AAGTTTAAGAAAACCACACCAGAATACGTCTTCCAC...AATGGATTTACTAGAAGAACATTGCTGCTCCTTATTTATTGTAGTGTGCTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CCA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTGTGGAAGACGTATTCTaGTGTGGTTTTCTTAAACTT +
Preference number: 4 (lower is better)
Translates to: SSICRHLITKLWIQKTKAVEDVF*CGFLKL
Trigger: AAGTTTAAGAAAACCACACCAGAATACGTCTTCCAC...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CCA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAATTTCATGTCTTCAGTaGAACTGGCATACTGTAATT +
Preference number: 4 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLISCLQ*NWHTVI
Trigger: AATTACAGTATGCCAGTTCCACTGAAGACATGAAAT...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS GCA 90 bp CCGAAGGTGGCGGGGCCGGCGCGGGCAGGATGTGCTGTCTCACGCTaGGCCGGCCGCTCGGCTCGCGCTCCTCCGGGAGCGATCACTTCC +
Preference number: 5 (lower is better)
Translates to: PKVAGPARAGCAVSR*AGRSARAPPGAITS
Trigger: GGAAGTGATCGCTCCCGGAGGAGCGCGAGCCGAGCGGCCGGCGCAGCGTGAGACAGCACATCCTGCCCGCGCCGGCCCCGCCACCTTCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000524053.5
ENST00000537881.5
ENST00000630942.2
CDS CCA 90 bp CAAATACGGCCTTCCGAGTCCCCAACAGCAACTTCTTTGCCAGCTTaGGCCCAACGAACACGGTTTAGGGCGGATGCCCCCTCAATGGCC +
Preference number: 5 (lower is better)
Translates to: QIRPSESPTATSLPA*AQRTRFRADAPSMA
Trigger: GGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCGGAAGGCCGTATTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000537881.5
ENST00000630942.2
CDS GCA 90 bp CATAGACCCAAATACGGCCTTCCGAGTCCCCAACAGCAACTTCTTTaGCAGCTTGGGCCCAACGAACACGGTTTAGGGCGGATGCCCCCT +
Preference number: 5 (lower is better)
Translates to: HRPKYGLPSPQQQLL*QLGPNEHGLGRMPP
Trigger: AGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCGGAAGGCCGTATTTGGGTCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000537881.5
ENST00000630942.2
CDS GCA 90 bp TGCAGCGGCTGCACTAGAGGCGGCTCCGGTGAGATACCAATGCTTTaGAGCAAAGCCTCTGTCTCTCGTCGTTTGCGATCCAGATCAGAG +
Preference number: 5 (lower is better)
Translates to: CSGCTRGGSGEIPML*SKASVSRRLRSRSE
Trigger: CTCTGATCTGGATCGCAAACGACGAGAGACAGAGGCTTTGCTGCAAAGCATTGGTATCTCACCGGAGCCGCCTCTAGTGCAGCCGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324972.10
ENST00000437599.5
CDS CCA 90 bp CAGACGCTGAGCTCTAGGACACAAAGGTGGGGGCTGCAGTGGGGGTaGCTCATTTCCACTAGGCAGATAACTCAACAGTGCCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: QTLSSRTQRWGLQWG*LISTRQITQQCLPP
Trigger: AGGAGGAAGGCACTGTTGAGTTATCTGCCTAGTGGAAATGAGCCACCCCCACTGCAGCCCCCACCTTTGTGTCCTAGAGCTCAGCGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS GCA 90 bp ATAGGGGTTGGGACTAGAGGCGGCTCCGGTGAGATACCAATGCTTTaGAGCAAAGCCTCTGTCTCTCGTCGTTTGCGATCCAGATCAGAG +
Preference number: 5 (lower is better)
Translates to: IGVGTRGGSGEIPML*SKASVSRRLRSRSE
Trigger: CTCTGATCTGGATCGCAAACGACGAGAGACAGAGGCTTTGCTGCAAAGCATTGGTATCTCACCGGAGCCGCCTCTAGTCCCAACCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359388.8
ENST00000413338.5
ENST00000447467.6
ENST00000457059.2
ENST00000518089.5
ENST00000524053.5
ENST00000537881.5
ENST00000630942.2
CDS-3UTR CAA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCTGGGCGGCGGCAGCGTaGGTGCAGGCGGCTCCCGAA +
Preference number: 5 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSWAAAA*VQAAPE
Trigger: TTCGGGAGCCGCCTGCACCAACGCTGCCGCCGCCCA...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp AGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTATTTGGGCGGCGGCAGCGTaGGTGCAGGCGGCTCCCGAA +
Preference number: 5 (lower is better)
Translates to: STKVLRVLLWWWKHDVFIWAAAA*VQAAPE
Trigger: TTCGGGAGCCGCCTGCACCAACGCTGCCGCCGCCCA...AATAAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR CAA 90 bp TGCTATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTTGGGCGGCGGCAGCGTaGGTGCAGGCGGCTCCCGAA +
Preference number: 5 (lower is better)
Translates to: CYVELNITSTAAERIQSSWAAAA*VQAAPE
Trigger: TTCGGGAGCCGCCTGCACCAACGCTGCCGCCGCCCA...AGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp TTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATGGGCGGCGGCAGCGTaGGTGCAGGCGGCTCCCGAA +
Preference number: 5 (lower is better)
Translates to: LEYLEQSWHNMAPKISQQWAAAA*VQAAPE
Trigger: TTCGGGAGCCGCCTGCACCAACGCTGCCGCCGCCCA...TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS GCA 90 bp AAAAATGCAGCGGCTGCACTAGAGGCGGCTCCGGTGAGATACCAATaGTTTGCAGCAAAGCCTCTGTCTCTCGTCGTTTGCGATCCAGAT +
Preference number: 5 (lower is better)
Translates to: KNAAAALEAAPVRYQ*FAAKPLSLVVCDPD
Trigger: ATCTGGATCGCAAACGACGAGAGACAGAGGCTTTGCTGCAAAGCATTGGTATCTCACCGGAGCCGCCTCTAGTGCAGCCGCTGCATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324972.10
ENST00000437599.5
CDS-3UTR CAA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCATGGGCGGCGGCAGCGTaGGTGCAGGCGGCTCCCGAA +
Preference number: 5 (lower is better)
Translates to: THLEYLEQSWHNMAPKISWAAAA*VQAAPE
Trigger: TTCGGGAGCCGCCTGCACCAACGCTGCCGCCGCCCA...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGGGTGAGAAAAGTCGATaGGGCCCACTGCCATGTGGC +
Preference number: 5 (lower is better)
Translates to: GTHLSVADITSRHSWAQWGEKSR*GPLPCG
Trigger: GCCACATGGCAGTGGGCCCAATCGACTTTTCTCACC...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS TCA 90 bp ATCCTCTTCAGACTGATGCGTGGCAAGAGGAGTCTGGGTCTCCTTTaGGTAGGACACTACTTCCCTTGGCAGGAAATCCACTTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: ILFRLMRGKRSLGLL*VGHYFPWQEIHLGD
Trigger: GTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAGTCTGAAGAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000519371.1
ENST00000537881.5
ENST00000630942.2
CDS TCA 90 bp GGTGGGTGGAAGCCAAGTGTCTCATGCATAACCCTCCTGGATTGGTaGCCCGTCAAATCCCTTAATGTAGTTGGGTCTGGCAGAGAGGTA +
Preference number: 5 (lower is better)
Translates to: GGWKPSVSCITLLDW*PVKSLNVVGSGREV
Trigger: TACCTCTCTGCCAGACCCAACTACATTAAGGGATTTGACGGGTCACCAATCCAGGAGGGTTATGCATGAGACACTTGGCTTCCACCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497626.1
CDS CCA 90 bp CCCAGTTTATGCAGTCTTCTTCCAAGTTCTGAGTCTGACTGCAGCTaGAGCACTGAGGGGTCTGTGTCCCACTGCAGGGTCCTTGTTAAT +
Preference number: 5 (lower is better)
Translates to: PSLCSLLPSSESDCS*STEGSVSHCRVLVN
Trigger: ATTAACAAGGACCCTGCAGTGGGACACAGACCCCTCAGTGCTCCAGCTGCAGTCAGACTCAGAACTTGGAAGAAGACTGCATAAACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
ENST00000537881.5
CDS-3UTR CAA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGGGAACCTCGGTGTCATaGTTGAGGTTCCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GTHLSVADITSRHSWAQWGTSVS*LRFQRS
Trigger: GGACCTCTGGAACCTCAACAATGACACCGAGGTTCC...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CAA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGCCTCAATGGCCACACTaGCTGTTGGAACCTCGGTGT +
Preference number: 5 (lower is better)
Translates to: GTHLSVADITSRHSWAQWPQWPH*LLEPRC
Trigger: ACACCGAGGTTCCAACAGCAAGTGTGGCCATTGAGG...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CAA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGCTTTTGTCAGACATGTaGGTTTCCTGGACGCGCTCG +
Preference number: 5 (lower is better)
Translates to: GTHLSVADITSRHSWAQWLLSDM*VSWTRS
Trigger: CGAGCGCGTCCAGGAAACCAACATGTCTGACAAAAG...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CAA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGACCTCGGTGTCATTGTaGAGGTTCCAGAGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: GTHLSVADITSRHSWAQWTSVSL*RFQRSK
Trigger: CTTGGACCTCTGGAACCTCAACAATGACACCGAGGT...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CAA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGAACTTCTTTGCCAGCTaGGGCCCAACGAACACGGTT +
Preference number: 5 (lower is better)
Translates to: GTHLSVADITSRHSWAQWNFFAS*GPTNTV
Trigger: AACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTT...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS TCA 90 bp AAGCCACCATCAGCTCAGGGTACTGGAGGGACCAGTCCATACAAGTaGCCACTCGATGCTTGGACCAATGTTCATCATAGAACTGACGAT +
Preference number: 5 (lower is better)
Translates to: KPPSAQGTGGTSPYK*PLDAWTNVHHRTDD
Trigger: ATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAGTACCCTGAGCTGATGGTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000519371.1
ENST00000537881.5
ENST00000630942.2
CDS GCA 90 bp GTGAGATACCAATGCTTTGCAGCAAAGCCTCTGTCTCTCGTCGTTTaGGATCCAGATCAGAGTCGTCCTGAACGGGTTCTTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: VRYQCFAAKPLSLVV*DPDQSRPERVLSSA
Trigger: AGCAGAAGAAAGAACCCGTTCAGGACGACTCTGATCTGGATCGCAAACGACGAGAGACAGAGGCTTTGCTGCAAAGCATTGGTATCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000413338.5
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000518089.5
ENST00000524053.5
ENST00000537881.5
ENST00000630942.2
CDS CCA 90 bp TGTACCTTCCTCACTGCCAACCACGAAGTTATTGACGTCTCCCGTTaGGAAAGCCATTCCGGTAACAGCGACAGGCTTGGACTTATTGTA +
Preference number: 5 (lower is better)
Translates to: CTFLTANHEVIDVSR*ESHSGNSDRLGLIV
Trigger: TACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCAACGGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000497626.1
ENST00000537881.5
ENST00000630942.2
CDS-3UTR CAA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACCCACTGCAGGGTCCTaGTTAATGGCCCCAGATCGC +
Preference number: 5 (lower is better)
Translates to: LGAKLAQYGTQNITAILIPTAGS*LMAPDR
Trigger: GCGATCTGGGGCCATTAACAAGGACCCTGCAGTGGG...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGACAGGCTTGGACTTATaGTACACCAGCTCCATGCTC +
Preference number: 5 (lower is better)
Translates to: GTHLSVADITSRHSWAQWTGLDL*YTSSML
Trigger: GAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGT...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CAA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGCCAACCACGAAGTTATaGACGTCTCCCGTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: GTHLSVADITSRHSWAQWPTTKL*TSPVGK
Trigger: TTTCCCAACGGGAGACGTCAATAACTTCGTGGTTGG...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CAA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGGAACCTCGGTGTCATaGTTGAGGTTCCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADGTSVS*LRFQRS
Trigger: GGACCTCTGGAACCTCAACAATGACACCGAGGTTCC...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGCCTCAATGGCCACACTaGCTGTTGGAACCTCGGTGT +
Preference number: 5 (lower is better)
Translates to: GAKLAQYGTQNITAILILPQWPH*LLEPRC
Trigger: ACACCGAGGTTCCAACAGCAAGTGTGGCCATTGAGG...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGCCAACAGCAACTTCTTaGCCAGCTTGGGCCCAACGA +
Preference number: 5 (lower is better)
Translates to: GAKLAQYGTQNITAILILPTATS*PAWAQR
Trigger: TCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGG...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GGTACTCATCTCTCAGTAGCTGATATAACAAGCAGGCATAGCTGGGCACAGTGGTTGAGTCCAGGAATTTaGAGACCAGCCTGGCAACAT +
Preference number: 5 (lower is better)
Translates to: GTHLSVADITSRHSWAQWLSPGI*RPAWQH
Trigger: ATGTTGCCAGGCTGGTCTCAAAATTCCTGGACTCAA...CCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS TCA 90 bp AAAGCCTCTGTCTCTCGTCGTTTGCGATCCAGATCAGAGTCGTCCTaGACGGGTTCTTTCTTCTGCTGCATATCAGCCTCTTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: KASVSRRLRSRSESS*TGSFFCCISASFFF
Trigger: GAAAAAGAAAGAGGCTGATATGCAGCAGAAGAAAGAACCCGTTCAGGACGACTCTGATCTGGATCGCAAACGACGAGAGACAGAGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000413338.5
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000518089.5
ENST00000524053.5
ENST00000537881.5
ENST00000630942.2
CDS-3UTR CAA 90 bp AGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCTCTTTTGTCAGACATGTaGGTTTCCTGGACGCGCTCG +
Preference number: 5 (lower is better)
Translates to: SNTDTEWTPNTRDLTADALLSDM*VSWTRS
Trigger: CGAGCGCGTCCAGGAAACCAACATGTCTGACAAAAG...AGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACCTTTTGTCAGACATGTaGGTTTCCTGGACGCGCTCG +
Preference number: 5 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADLLSDM*VSWTRS
Trigger: CGAGCGCGTCCAGGAAACCAACATGTCTGACAAAAG...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp TCACCATGTAAAACACCACGTCTCAAGTCTTTGGCCCTGTACCATAATATGAGGTCTGTCTCTCGTCGTTaGCGATCCAGATCAGAGTCG +
Preference number: 5 (lower is better)
Translates to: SPCKTPRLKSLALYHNMRSVSRR*RSRSES
Trigger: CGACTCTGATCTGGATCGCAAACGACGAGAGACAGA...CCTCATATTATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTACCCACTGCAGGGTCCTaGTTAATGGCCCCAGATCGC +
Preference number: 5 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLPTAGS*LMAPDR
Trigger: GCGATCTGGGGCCATTAACAAGGACCCTGCAGTGGG...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACACCCACTGCAGGGTCCTaGTTAATGGCCCCAGATCGC +
Preference number: 5 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTPTAGS*LMAPDR
Trigger: GCGATCTGGGGCCATTAACAAGGACCCTGCAGTGGG...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATATCCTGTCACTGGCCCTaGGTGACCTTCAAAGACCTC +
Preference number: 5 (lower is better)
Translates to: LGAKLAQYGTQNITAILISCHWP*VTFKDL
Trigger: GAGGTCTTTGAAGGTCACCAAGGGCCAGTGACAGGA...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGGGTGAGAAAAGTCGATaGGGCCCACTGCCATGTGGC +
Preference number: 5 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQGEKSR*GPLPCG
Trigger: GCCACATGGCAGTGGGCCCAATCGACTTTTCTCACC...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATGGTGAGAAAAGTCGATaGGGCCCACTGCCATGTGGC +
Preference number: 5 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNGEKSR*GPLPCG
Trigger: GCCACATGGCAGTGGGCCCAATCGACTTTTCTCACC...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCGGTGAGAAAAGTCGATaGGGCCCACTGCCATGTGGC +
Preference number: 5 (lower is better)
Translates to: DTFRILGAKLAQYGTQNIGEKSR*GPLPCG
Trigger: GCCACATGGCAGTGGGCCCAATCGACTTTTCTCACC...GATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGTGAGAAAAGTCGATaGGGCCCACTGCCATGTGGC +
Preference number: 5 (lower is better)
Translates to: HICTQSYLASYGFNRTMPGEKSR*GPLPCG
Trigger: GCCACATGGCAGTGGGCCCAATCGACTTTTCTCACC...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACAGCGGCTTGTTGTGCTaGGTGGTCCACAGTTTGACA +
Preference number: 5 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADSGLLC*VVHSLT
Trigger: TGTCAAACTGTGGACCACCAAGCACAACAAGCCGCT...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGACCTCGGTGTCATTGTaGAGGTTCCAGAGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: GAKLAQYGTQNITAILILTSVSL*RFQRSK
Trigger: CTTGGACCTCTGGAACCTCAACAATGACACCGAGGT...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACCTCAATGGCCACACTaGCTGTTGGAACCTCGGTGT +
Preference number: 5 (lower is better)
Translates to: LGAKLAQYGTQNITAILIPQWPH*LLEPRC
Trigger: ACACCGAGGTTCCAACAGCAAGTGTGGCCATTGAGG...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAACTTCTTTGCCAGCTaGGGCCCAACGAACACGGTT +
Preference number: 5 (lower is better)
Translates to: GAKLAQYGTQNITAILILNFFAS*GPTNTV
Trigger: AACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTT...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp TCACCATGTAAAACACCACGTCTCAAGTCTTTGGCCCTGTACCATAATATGAGGCCGAATACAAGAGACTaGACTGCAGACGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: SPCKTPRLKSLALYHNMRPNTRD*TADAEL
Trigger: GAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGG...CCTCATATTATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTTTTGTCAGACATGTaGGTTTCCTGGACGCGCTCG +
Preference number: 5 (lower is better)
Translates to: LGAKLAQYGTQNITAILILLSDM*VSWTRS
Trigger: CGAGCGCGTCCAGGAAACCAACATGTCTGACAAAAG...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGTCTGTCTCTCGTCGTTaGCGATCCAGATCAGAGTCG +
Preference number: 5 (lower is better)
Translates to: EEHHICTQSYLASYGFNRSVSRR*RSRSES
Trigger: CGACTCTGATCTGGATCGCAAACGACGAGAGACAGA...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGTAACAGCGACAGGCTaGGACTTATTGTACACCAGC +
Preference number: 5 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADVTATG*DLLYTS
Trigger: GCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTAC...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCTCCTGTCACTGGCCCTaGGTGACCTTCAAAGACCTC +
Preference number: 5 (lower is better)
Translates to: DTFRILGAKLAQYGTQNISCHWP*VTFKDL
Trigger: GAGGTCTTTGAAGGTCACCAAGGGCCAGTGACAGGA...GATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGTCCTGTCACTGGCCCTaGGTGACCTTCAAAGACCTC +
Preference number: 5 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMSCHWP*VTFKDL
Trigger: GAGGTCTTTGAAGGTCACCAAGGGCCAGTGACAGGA...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCAGGTGAGAAAAGTCGATaGGGCCCACTGCCATGTGGC +
Preference number: 5 (lower is better)
Translates to: THLEYLEQSWHNMAPKISGEKSR*GPLPCG
Trigger: GCCACATGGCAGTGGGCCCAATCGACTTTTCTCACC...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGAGCGGCTTGTTGTGCTaGGTGGTCCACAGTTTGACA +
Preference number: 5 (lower is better)
Translates to: EEHHICTQSYLASYGFNRSGLLC*VVHSLT
Trigger: TGTCAAACTGTGGACCACCAAGCACAACAAGCCGCT...CCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp TGCTATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTGGAACCTCGGTGTCATaGTTGAGGTTCCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: CYVELNITSTAAERIQSSGTSVS*LRFQRS
Trigger: GGACCTCTGGAACCTCAACAATGACACCGAGGTTCC...AGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATGGAACCTCGGTGTCATaGTTGAGGTTCCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNGTSVS*LRFQRS
Trigger: GGACCTCTGGAACCTCAACAATGACACCGAGGTTCC...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp TTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAAGGAACCTCGGTGTCATaGTTGAGGTTCCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LEYLEQSWHNMAPKISQQGTSVS*LRFQRS
Trigger: GGACCTCTGGAACCTCAACAATGACACCGAGGTTCC...TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGGAACCTCGGTGTCATaGTTGAGGTTCCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMGTSVS*LRFQRS
Trigger: GGACCTCTGGAACCTCAACAATGACACCGAGGTTCC...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCACCTCAATGGCCACACTaGCTGTTGGAACCTCGGTGT +
Preference number: 5 (lower is better)
Translates to: HICTQSYLASYGFNRTMPPQWPH*LLEPRC
Trigger: ACACCGAGGTTCCAACAGCAAGTGTGGCCATTGAGG...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCCTCAATGGCCACACTaGCTGTTGGAACCTCGGTGT +
Preference number: 5 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQPQWPH*LLEPRC
Trigger: ACACCGAGGTTCCAACAGCAAGTGTGGCCATTGAGG...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCCCAACAGCAACTTCTTaGCCAGCTTGGGCCCAACGA +
Preference number: 5 (lower is better)
Translates to: DTFRILGAKLAQYGTQNIPTATS*PAWAQR
Trigger: TCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGG...GATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCCAACAGCAACTTCTTaGCCAGCTTGGGCCCAACGA +
Preference number: 5 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQPTATS*PAWAQR
Trigger: TCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGG...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATCCAACAGCAACTTCTTaGCCAGCTTGGGCCCAACGA +
Preference number: 5 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNPTATS*PAWAQR
Trigger: TCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGG...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACCGAATACAAGAGACTaGACTGCAGACGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: LGAKLAQYGTQNITAILIPNTRD*TADAEL
Trigger: GAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGG...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS CCA 90 bp AACTTCCACAAAGCTGGTGCATTTCCAGTAATAAACACTGAGGCCTaGTTCCCTAGAATTTATGGGAGGGCCAGTTACTTCACTCTTGGT +
Preference number: 5 (lower is better)
Translates to: NFHKAGAFPVINTEA*FPRIYGRASYFTLG
Trigger: ACCAAGAGTGAAGTAACTGGCCCTCCCATAAATTCTAGGGAACCAGGCCTCAGTGTTTATTACTGGAAATGCACCAGCTTTGTGGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497626.1
CDS-3UTR CAA 90 bp ATAAGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTCTTTTGTCAGACATGTaGGTTTCCTGGACGCGCTCG +
Preference number: 5 (lower is better)
Translates to: ISTKVLRVLLWWWKHDVFLLSDM*VSWTRS
Trigger: CGAGCGCGTCCAGGAAACCAACATGTCTGACAAAAG...AAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR CAA 90 bp ATAAGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTTCTGTCTCTCGTCGTTaGCGATCCAGATCAGAGTCG +
Preference number: 5 (lower is better)
Translates to: ISTKVLRVLLWWWKHDVFSVSRR*RSRSES
Trigger: CGACTCTGATCTGGATCGCAAACGACGAGAGACAGA...AAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCTTAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR CAA 90 bp TGCTATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTTCTGTCTCTCGTCGTTaGCGATCCAGATCAGAGTCG +
Preference number: 5 (lower is better)
Translates to: CYVELNITSTAAERIQSSSVSRR*RSRSES
Trigger: CGACTCTGATCTGGATCGCAAACGACGAGAGACAGA...AGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCATCCTGTCACTGGCCCTaGGTGACCTTCAAAGACCTC +
Preference number: 5 (lower is better)
Translates to: THLEYLEQSWHNMAPKISSCHWP*VTFKDL
Trigger: GAGGTCTTTGAAGGTCACCAAGGGCCAGTGACAGGA...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp TGCTATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTAGCGGCTTGTTGTGCTaGGTGGTCCACAGTTTGACA +
Preference number: 5 (lower is better)
Translates to: CYVELNITSTAAERIQSSSGLLC*VVHSLT
Trigger: TGTCAAACTGTGGACCACCAAGCACAACAAGCCGCT...AGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp CATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGACCTCGGTGTCATTGTaGAGGTTCCAGAGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: HLEYLEQSWHNMAPKISQTSVSL*RFQRSK
Trigger: CTTGGACCTCTGGAACCTCAACAATGACACCGAGGT...CTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATACCTCGGTGTCATTGTaGAGGTTCCAGAGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNTSVSL*RFQRSK
Trigger: CTTGGACCTCTGGAACCTCAACAATGACACCGAGGT...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp TCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCTGGCCACACTTGCTGTaGGAACCTCGGTGTCATTGT +
Preference number: 5 (lower is better)
Translates to: SYLASYGFNRTMPGVHVSWPHLL*EPRCHC
Trigger: ACAATGACACCGAGGTTCCAACAGCAAGTGTGGCCA...GCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCATGGCCACACTTGCTGTaGGAACCTCGGTGTCATTGT +
Preference number: 5 (lower is better)
Translates to: HICTQSYLASYGFNRTMPWPHLL*EPRCHC
Trigger: ACAATGACACCGAGGTTCCAACAGCAAGTGTGGCCA...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACCTCAATGGCCACACTaGCTGTTGGAACCTCGGTGT +
Preference number: 5 (lower is better)
Translates to: THLEYLEQSWHNMAPKISPQWPH*LLEPRC
Trigger: ACACCGAGGTTCCAACAGCAAGTGTGGCCATTGAGG...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCAACTTCTTTGCCAGCTaGGGCCCAACGAACACGGTT +
Preference number: 5 (lower is better)
Translates to: DTFRILGAKLAQYGTQNINFFAS*GPTNTV
Trigger: AACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTT...GATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATAACTTCTTTGCCAGCTaGGGCCCAACGAACACGGTT +
Preference number: 5 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNNFFAS*GPTNTV
Trigger: AACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTT...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACCCACGTCTCAAGTCTTaGGCCCTGTACCATAATATG +
Preference number: 5 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADPRLKS*ALYHNM
Trigger: CATATTATGGTACAGGGCCAAAGACTTGAGACGTGG...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp AGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCTTATGCAGTCTTCTTCTaGTTAATGGCCCCAGATCGC +
Preference number: 5 (lower is better)
Translates to: SNTDTEWTPNTRDLTADAYAVFF*LMAPDR
Trigger: GCGATCTGGGGCCATTAACAAGAAGAAGACTGCATA...AGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359388.8
ENST00000437599.5
CDS-3UTR CAA 90 bp ATAAGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTGCAATGCTTCGTCTCTaGTTAATGGCCCCAGATCGC +
Preference number: 5 (lower is better)
Translates to: ISTKVLRVLLWWWKHDVFAMLRL*LMAPDR
Trigger: GCGATCTGGGGCCATTAACAAGAGACGAAGCATTGC...AAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR CAA 90 bp TGCTATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTACAGGCTTGGACTTATaGTACACCAGCTCCATGCTC +
Preference number: 5 (lower is better)
Translates to: CYVELNITSTAAERIQSSTGLDL*YTSSML
Trigger: GAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGT...AGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp TTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAAGTAACAGCGACAGGCTaGGACTTATTGTACACCAGC +
Preference number: 5 (lower is better)
Translates to: LEYLEQSWHNMAPKISQQVTATG*DLLYTS
Trigger: GCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTAC...TTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCGTAACAGCGACAGGCTaGGACTTATTGTACACCAGC +
Preference number: 5 (lower is better)
Translates to: DTFRILGAKLAQYGTQNIVTATG*DLLYTS
Trigger: GCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTAC...GATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CTGGCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATCCAACCACGAAGTTATaGACGTCTCCCGTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: LASYGFNRTMPGVHVSTNPTTKL*TSPVGK
Trigger: TTTCCCAACGGGAGACGTCAATAACTTCGTGGTTGG...ATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCACCAACCACGAAGTTATaGACGTCTCCCGTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: HICTQSYLASYGFNRTMPPTTKL*TSPVGK
Trigger: TTTCCCAACGGGAGACGTCAATAACTTCGTGGTTGG...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGCCAACCACGAAGTTATaGACGTCTCCCGTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMPTTKL*TSPVGK
Trigger: TTTCCCAACGGGAGACGTCAATAACTTCGTGGTTGG...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAAGCGGCTTGTTGTGCTaGGTGGTCCACAGTTTGACA +
Preference number: 5 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLSGLLC*VVHSLT
Trigger: TGTCAAACTGTGGACCACCAAGCACAACAAGCCGCT...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATAGCGGCTTGTTGTGCTaGGTGGTCCACAGTTTGACA +
Preference number: 5 (lower is better)
Translates to: YVELNITSTAAERIQSSHSGLLC*VVHSLT
Trigger: TGTCAAACTGTGGACCACCAAGCACAACAAGCCGCT...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp GAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTATGCAACCTCGGTGTCATTGTaGAGGTTCCAGAGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: ELNITSTAAERIQSSHYATSVSL*RFQRSK
Trigger: CTTGGACCTCTGGAACCTCAACAATGACACCGAGGT...TGCATAATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCAACCTCGGTGTCATTGTaGAGGTTCCAGAGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: THLEYLEQSWHNMAPKISTSVSL*RFQRSK
Trigger: CTTGGACCTCTGGAACCTCAACAATGACACCGAGGT...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp TATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTGGCCACACTTGCTGTaGGAACCTCGGTGTCATTGT +
Preference number: 5 (lower is better)
Translates to: YVELNITSTAAERIQSSHWPHLL*EPRCHC
Trigger: ACAATGACACCGAGGTTCCAACAGCAAGTGTGGCCA...ATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp GAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTATGCATGGCCACACTTGCTGTaGGAACCTCGGTGTCATTGT +
Preference number: 5 (lower is better)
Translates to: ELNITSTAAERIQSSHYAWPHLL*EPRCHC
Trigger: ACAATGACACCGAGGTTCCAACAGCAAGTGTGGCCA...TGCATAATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp GAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTATGCAAACTTCTTTGCCAGCTaGGGCCCAACGAACACGGTT +
Preference number: 5 (lower is better)
Translates to: ELNITSTAAERIQSSHYANFFAS*GPTNTV
Trigger: AACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTT...TGCATAATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp TCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAACCCCAACAGCAACTTCTTaGCCAGCTTGGGCCCAACGA +
Preference number: 5 (lower is better)
Translates to: SYGFNRTMPGVHVSTNLTPTATS*PAWAQR
Trigger: TCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGG...GGTTAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACACCGAATACAAGAGACTaGACTGCAGACGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTPNTRD*TADAEL
Trigger: GAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGG...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACATATGCAGTCTTCTTCTaGTTAATGGCCCCAGATCGC +
Preference number: 5 (lower is better)
Translates to: AGTIWHPKYHSNTDTEWTYAVFF*LMAPDR
Trigger: GCGATCTGGGGCCATTAACAAGAAGAAGACTGCATA...TGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359388.8
ENST00000437599.5
CDS-3UTR CAA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTATCTGTCTCTCGTCGTTaGCGATCCAGATCAGAGTCG +
Preference number: 5 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLSVSRR*RSRSES
Trigger: CGACTCTGATCTGGATCGCAAACGACGAGAGACAGA...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACAACAGGCTTGGACTTATaGTACACCAGCTCCATGCTC +
Preference number: 5 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTTGLDL*YTSSML
Trigger: GAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGT...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAACAGGCTTGGACTTATaGTACACCAGCTCCATGCTC +
Preference number: 5 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLTGLDL*YTSSML
Trigger: GAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGT...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCAACAGGCTTGGACTTATaGTACACCAGCTCCATGCTC +
Preference number: 5 (lower is better)
Translates to: THLEYLEQSWHNMAPKISTGLDL*YTSSML
Trigger: GAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGT...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp ACACATTTAGAATACTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCAGTAACAGCGACAGGCTaGGACTTATTGTACACCAGC +
Preference number: 5 (lower is better)
Translates to: THLEYLEQSWHNMAPKISVTATG*DLLYTS
Trigger: GCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTAC...TGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp ATATGGCACCCAAAATATCACAGCAATACTGATACTGAATGGACACCGAATACAGTAACAGCGACAGGCTaGGACTTATTGTACACCAGC +
Preference number: 5 (lower is better)
Translates to: IWHPKYHSNTDTEWTPNTVTATG*DLLYTS
Trigger: GCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTAC...TGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTATGCACCAACCACGAAGTTATaGACGTCTCCCGTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: ELNITSTAAERIQSSHYAPTTKL*TSPVGK
Trigger: TTTCCCAACGGGAGACGTCAATAACTTCGTGGTTGG...TGCATAATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp ATGCAGCACACTACAATAAATAAGGAGCAGCAATGTTCTTCTAGTAAATCCATTTCCTGTCACTGGCCCTaGGTGACCTTCAAAGACCTC +
Preference number: 5 (lower is better)
Translates to: MQHTTINKEQQCSSSKSISCHWP*VTFKDL
Trigger: GAGGTCTTTGAAGGTCACCAAGGGCCAGTGACAGGA...AATGGATTTACTAGAAGAACATTGCTGCTCCTTATTTATTGTAGTGTGCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTTCCTGTCACTGGCCCTaGGTGACCTTCAAAGACCTC +
Preference number: 5 (lower is better)
Translates to: SSICRHLITKLWIQKTKASCHWP*VTFKDL
Trigger: GAGGTCTTTGAAGGTCACCAAGGGCCAGTGACAGGA...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CAA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTATGGCCACACTTGCTGTaGGAACCTCGGTGTCATTGT +
Preference number: 5 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLWPHLL*EPRCHC
Trigger: ACAATGACACCGAGGTTCCAACAGCAAGTGTGGCCA...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp TCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAACCAACTTCTTTGCCAGCTaGGGCCCAACGAACACGGTT +
Preference number: 5 (lower is better)
Translates to: SYGFNRTMPGVHVSTNLTNFFAS*GPTNTV
Trigger: AACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTT...GGTTAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCCCAACAGCAACTTCTTaGCCAGCTTGGGCCCAACGA +
Preference number: 5 (lower is better)
Translates to: TATFHIDKRVSSSQTHEIPTATS*PAWAQR
Trigger: TCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGG...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CAA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCACCACGTCTCAAGTCTTaGGCCCTGTACCATAATATG +
Preference number: 5 (lower is better)
Translates to: HICTQSYLASYGFNRTMPPRLKS*ALYHNM
Trigger: CATATTATGGTACAGGGCCAAAGACTTGAGACGTGG...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp AGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCTAGGAACCATAGACTTTaGTCAGACTGTGTTAGCTTC +
Preference number: 5 (lower is better)
Translates to: SNTDTEWTPNTRDLTADARNHRL*SDCVSF
Trigger: GAAGCTAACACAGTCTGACAAAAGTCTATGGTTCCT...AGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp AGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTATTAGGGAGGAGAATCATTaGAGGCCAGAAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: STKVLRVLLWWWKHDVFIREENH*RPEVQD
Trigger: GTCTTGAACTTCTGGCCTCAAATGATTCTCCTCCCT...AATAAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR CAA 90 bp AGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACGCTGCTTTTAAGTCACTTTaGTCAGACATGTTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: SNTDTEWTPNTRDLTADAAFKSL*SDMLVS
Trigger: GGAAACCAACATGTCTGACAAAAGTGACTTAAAAGC...AGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCTCTGTCTCTCGTCGTTaGCGATCCAGATCAGAGTCG +
Preference number: 5 (lower is better)
Translates to: TATFHIDKRVSSSQTHEISVSRR*RSRSES
Trigger: CGACTCTGATCTGGATCGCAAACGACGAGAGACAGA...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CAA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCAGCGGCTTGTTGTGCTaGGTGGTCCACAGTTTGACA +
Preference number: 5 (lower is better)
Translates to: TATFHIDKRVSSSQTHEISGLLC*VVHSLT
Trigger: TGTCAAACTGTGGACCACCAAGCACAACAAGCCGCT...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CAA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTTGGCCACACTTGCTGTaGGAACCTCGGTGTCATTGT +
Preference number: 5 (lower is better)
Translates to: SSICRHLITKLWIQKTKAWPHLL*EPRCHC
Trigger: ACAATGACACCGAGGTTCCAACAGCAAGTGTGGCCA...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CAA 90 bp TCACCATGTAAAACACCACGTCTCAAGTCTTTGGCCCTGTACCATAATATGAGGACACATTTAGAATACTaGGAGCAAAGCTGGCACAAT +
Preference number: 5 (lower is better)
Translates to: SPCKTPRLKSLALYHNMRTHLEY*EQSWHN
Trigger: ATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT...CCTCATATTATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp CACAGCAATACTGATACTGAATGGACACCGAATACAAGAGACTTGACTGCAGACACACATTTAGAATACTaGGAGCAAAGCTGGCACAAT +
Preference number: 5 (lower is better)
Translates to: HSNTDTEWTPNTRDLTADTHLEY*EQSWHN
Trigger: ATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT...GTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATACTGACACATTTAGAATACTaGGAGCAAAGCTGGCACAAT +
Preference number: 5 (lower is better)
Translates to: GAKLAQYGTQNITAILILTHLEY*EQSWHN
Trigger: ATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT...CAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp CTTGGAGCAAAGCTGGCACAATATGGCACCCAAAATATCACAGCAATACTGATAAGGAACCATAGACTTTaGTCAGACTGTGTTAGCTTC +
Preference number: 5 (lower is better)
Translates to: LGAKLAQYGTQNITAILIRNHRL*SDCVSF
Trigger: GAAGCTAACACAGTCTGACAAAAGTCTATGGTTCCT...TATCAGTATTGCTGTGATATTTTGGGTGCCATATTGTGCCAGCTTTGCTCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTGTAACAGCGACAGGCTaGGACTTATTGTACACCAGC +
Preference number: 5 (lower is better)
Translates to: SSICRHLITKLWIQKTKAVTATG*DLLYTS
Trigger: GCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTAC...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CAA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTACCACGTCTCAAGTCTTaGGCCCTGTACCATAATATG +
Preference number: 5 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLPRLKS*ALYHNM
Trigger: CATATTATGGTACAGGGCCAAAGACTTGAGACGTGG...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAAGGAACCATAGACTTTaGTCAGACTGTGTTAGCTTC +
Preference number: 5 (lower is better)
Translates to: HICTQSYLASYGFNRTMPRNHRL*SDCVSF
Trigger: GAAGCTAACACAGTCTGACAAAAGTCTATGGTTCCT...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp AGCACTAAGGTGCTAAGAGTGCTACTCTGGTGGTGGAAACATGATGTTTTTATTGCTTTTAAGTCACTTTaGTCAGACATGTTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: STKVLRVLLWWWKHDVFIAFKSL*SDMLVS
Trigger: GGAAACCAACATGTCTGACAAAAGTGACTTAAAAGC...AATAAAAACATCATGTTTCCACCACCAGAGTAGCACTCTTAGCACCTTAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS-3UTR CAA 90 bp CACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAATAGGACTATGCCAGCTTTTAAGTCACTTTaGTCAGACATGTTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: HICTQSYLASYGFNRTMPAFKSL*SDMLVS
Trigger: GGAAACCAACATGTCTGACAAAAGTGACTTAAAAGC...TGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp TGCTATGTGGAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTACACATTTAGAATACTaGGAGCAAAGCTGGCACAAT +
Preference number: 5 (lower is better)
Translates to: CYVELNITSTAAERIQSSTHLEY*EQSWHN
Trigger: ATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT...AGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTTATGCAGTCTTCTTCTaGTTAATGGCCCCAGATCGC +
Preference number: 5 (lower is better)
Translates to: SSICRHLITKLWIQKTKAYAVFF*LMAPDR
Trigger: GCGATCTGGGGCCATTAACAAGAAGAAGACTGCATA...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CAA 90 bp TACCATAATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGCTTTTGTCAGACATGTaGGTTTCCATCATCATGACT +
Preference number: 5 (lower is better)
Translates to: YHNMRNTTSAPNHIWLHMLLSDM*VSIIMT
Trigger: AGTCATGATGATGGAAACCAACATGTCTGACAAAAG...CATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATTATGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457059.2
CDS-3UTR CAA 90 bp AATATGAGGAACACCACATCTGCACCCAATCATATCTGGCTTCATATGGATTTAGCTTTTAAGTCACTTTaGTCAGACATGTTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: NMRNTTSAPNHIWLHMDLAFKSL*SDMLVS
Trigger: GGAAACCAACATGTCTGACAAAAGTGACTTAAAAGC...TAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GAACTTAATATAACCTCAACAGCAGCAGAGAGAATACAGTCCTCTCATTATGCAGCTTTTAAGTCACTTTaGTCAGACATGTTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: ELNITSTAAERIQSSHYAAFKSL*SDMLVS
Trigger: GGAAACCAACATGTCTGACAAAAGTGACTTAAAAGC...TGCATAATGAGAGGACTGTATTCTCTCTGCTGCTGTTGAGGTTATATTAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
CDS-3UTR CAA 90 bp ACAGCAACATTTCATATTGATAAAAGGGTCAGTTCATCGCAAACACATGAAATCGCCAACATAGGAGGATaGCTTGAGTCCAGGAATTTT +
Preference number: 5 (lower is better)
Translates to: TATFHIDKRVSSSQTHEIANIGG*LESRNF
Trigger: AAAATTCCTGGACTCAAGCAATCCTCCTATGTTGGC...GATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS-3UTR CAA 90 bp TCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAACCGCTTTTAAGTCACTTTaGTCAGACATGTTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: SYGFNRTMPGVHVSTNLTAFKSL*SDMLVS
Trigger: GGAAACCAACATGTCTGACAAAAGTGACTTAAAAGC...GGTTAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp GCTTCATATGGATTTAATAGGACTATGCCAGGAGTGCATGTAAGCACAAATTTAACACATTTAGAATACTaGGAGCAAAGCTGGCACAAT +
Preference number: 5 (lower is better)
Translates to: ASYGFNRTMPGVHVSTNLTHLEY*EQSWHN
Trigger: ATTGTGCCAGCTTTGCTCCAAGTATTCTAAATGTGT...TAAATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
CDS-3UTR CAA 90 bp TCCTCAATATGTAGGCACCTAATAACAAAGCTTTGGATACAGAAAACAAAAGCTGCTTTTAAGTCACTTTaGTCAGACATGTTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: SSICRHLITKLWIQKTKAAFKSL*SDMLVS
Trigger: GGAAACCAACATGTCTGACAAAAGTGACTTAAAAGC...AGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCCTACATATTGAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630942.2
CDS GCA 72 bp GCTCCCGAAGGTGGCGGGGCCGGCGCGGGCAGGATGTaGTGTCTCACGCTGCGCCGGCCGCTCGGCTCGCGC +
Preference number: 6 (lower is better)
Translates to: APEGGGAGAGRM*CLTLRRPLGSR
Trigger: GCGCGAGCCGAGCGGCCGGCGCAGCGTGAGACAGCACATCCTGCCCGCGCCGGCCCCGCCACCTTCGGGAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000413338.5
ENST00000437599.5
ENST00000447467.6
ENST00000524053.5
ENST00000537881.5
ENST00000630942.2
CDS CCA 72 bp CGGCGGAACTGGGCTCCCCGAGCCGGCGGCGGCTCCTaGGCGGCGGCAGCGTTGGTGCAGGCGGCTCCCGAA +
Preference number: 6 (lower is better)
Translates to: RRNWAPRAGGGS*AAAALVQAAPE
Trigger: TTCGGGAGCCGCCTGCACCAACGCTGCCGCCGCCCAGGAGCCGCCGCCGGCTCGGGGAGCCCAGTTCCGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000413338.5
ENST00000437599.5
ENST00000447467.6
ENST00000524053.5
ENST00000537881.5
ENST00000630942.2
CDS CCA 72 bp CCTTCCGAGTCCCCAACAGCAACTTCTTTGCCAGCTTaGGCCCAACGAACACGGTTTAGGGCGGATGCCCCC +
Preference number: 6 (lower is better)
Translates to: PSESPTATSLPA*AQRTRFRADAP
Trigger: GGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCGGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000537881.5
ENST00000630942.2
CDS TCA 72 bp TGGCCACACTTGCTGTTGGAACCTCGGTGTCATTGTTaGGGTTCCAGAGGTCCAAGCGCCCCATCCCGTCCA +
Preference number: 6 (lower is better)
Translates to: WPHLLLEPRCHC*GSRGPSAPSRP
Trigger: TGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTTCCAACAGCAAGTGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000537881.5
ENST00000630942.2
CDS GCA 72 bp GCGGCTGCACTAGAGGCGGCTCCGGTGAGATACCAATaGTTTGCAGCAAAGCCTCTGTCTCTCGTCGTTTGC +
Preference number: 6 (lower is better)
Translates to: AAALEAAPVRYQ*FAAKPLSLVVC
Trigger: GCAAACGACGAGAGACAGAGGCTTTGCTGCAAAGCATTGGTATCTCACCGGAGCCGCCTCTAGTGCAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324972.10
ENST00000437599.5
CDS GCA 72 bp AAATACGGCCTTCCGAGTCCCCAACAGCAACTTCTTTaGCAGCTTGGGCCCAACGAACACGGTTTAGGGCGG +
Preference number: 6 (lower is better)
Translates to: KYGLPSPQQQLL*QLGPNEHGLGR
Trigger: CCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCGGAAGGCCGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000537881.5
ENST00000630942.2
CDS GCA 72 bp GGGACTAGAGGCGGCTCCGGTGAGATACCAATGCTTTaGAGCAAAGCCTCTGTCTCTCGTCGTTTGCGATCC +
Preference number: 6 (lower is better)
Translates to: GTRGGSGEIPML*SKASVSRRLRS
Trigger: GGATCGCAAACGACGAGAGACAGAGGCTTTGCTGCAAAGCATTGGTATCTCACCGGAGCCGCCTCTAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359388.8
ENST00000413338.5
ENST00000447467.6
ENST00000457059.2
ENST00000518089.5
ENST00000524053.5
ENST00000537881.5
ENST00000630942.2
CDS GCA 72 bp GGGTTGGGACTAGAGGCGGCTCCGGTGAGATACCAATaGTTTGCAGCAAAGCCTCTGTCTCTCGTCGTTTGC +
Preference number: 6 (lower is better)
Translates to: GLGLEAAPVRYQ*FAAKPLSLVVC
Trigger: GCAAACGACGAGAGACAGAGGCTTTGCTGCAAAGCATTGGTATCTCACCGGAGCCGCCTCTAGTCCCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359388.8
ENST00000413338.5
ENST00000447467.6
ENST00000457059.2
ENST00000518089.5
ENST00000524053.5
ENST00000537881.5
ENST00000630942.2
CDS CCA 72 bp TGCAGTCTTCTTCCAAGTTCTGAGTCTGACTGCAGCTaGAGCACTGAGGGGTCTGTGTCCCACTGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: CSLLPSSESDCS*STEGSVSHCRV
Trigger: GACCCTGCAGTGGGACACAGACCCCTCAGTGCTCCAGCTGCAGTCAGACTCAGAACTTGGAAGAAGACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
ENST00000537881.5
CDS CCA 72 bp CCCAACGAACACGGTTTAGGGCGGATGCCCCCTCAATaGCCACACTTGCTGTTGGAACCTCGGTGTCATTGT +
Preference number: 6 (lower is better)
Translates to: PNEHGLGRMPPQ*PHLLLEPRCHC
Trigger: ACAATGACACCGAGGTTCCAACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000537881.5
ENST00000630942.2
CDS CCA 72 bp GCAGACATATACCCAAGTTCTGAGTCTGACTGCAGCTaGAGCACTGAGGGGTCTGTGTCCCACTGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: ADIYPSSESDCS*STEGSVSHCRV
Trigger: GACCCTGCAGTGGGACACAGACCCCTCAGTGCTCCAGCTGCAGTCAGACTCAGAACTTGGGTATATGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518089.5
CDS CAA 72 bp CAAATACGGCCTTCCGAGTCCCCAACAGCAACTTCTTaGCCAGCTTGGGCCCAACGAACACGGTTTAGGGCG +
Preference number: 6 (lower is better)
Translates to: QIRPSESPTATS*PAWAQRTRFRA
Trigger: CGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCGGAAGGCCGTATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000537881.5
ENST00000630942.2
CDS GCA 72 bp TGCACTAGAGGCGGCTCCGGTGAGATACCAATGCTTTaGAGCAAAGCCTCTGTCTCTCGTCGTTTGCGATCC +
Preference number: 6 (lower is better)
Translates to: CTRGGSGEIPML*SKASVSRRLRS
Trigger: GGATCGCAAACGACGAGAGACAGAGGCTTTGCTGCAAAGCATTGGTATCTCACCGGAGCCGCCTCTAGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324972.10
ENST00000437599.5
CDS CAA 90 bp CCCGTTGGGAAAGCCATTCCGGTAACAGCGACAGGCTTGGACTTATaGTACACCAGCTCCATGCTCTCCTGTGGAGTTGAGAGCATGTCC +
Preference number: 6 (lower is better)
Translates to: PVGKAIPVTATGLDL*YTSSMLSCGVESMS
Trigger: GGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCAACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000497626.1
ENST00000537881.5
ENST00000630942.2
CDS GCA 72 bp AAATCCACTTGGGTGACCTTTGACACGCCCAGTTTATaGAGTCTTCTTCTGGGTCGGAGGGTCCTACGCCCA +
Preference number: 6 (lower is better)
Translates to: KSTWVTFDTPSL*SLLLGRRVLRP
Trigger: TGGGCGTAGGACCCTCCGACCCAGAAGAAGACTGCATAAACTGGGCGTGTCAAAGGTCACCCAAGTGGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519371.1
CDS CCA 72 bp CTCACTGCCAACCACGAAGTTATTGACGTCTCCCGTTaGGAAAGCCATTCCGGTAACAGCGACAGGCTTGGA +
Preference number: 6 (lower is better)
Translates to: LTANHEVIDVSR*ESHSGNSDRLG
Trigger: TCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCAACGGGAGACGTCAATAACTTCGTGGTTGGCAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000497626.1
ENST00000537881.5
ENST00000630942.2
CDS CAA 72 bp CCCGTTGGGAAAGCCATTCCGGTAACAGCGACAGGCTaGGACTTATTGTACACCAGCTCCATGCTCTCCTGT +
Preference number: 6 (lower is better)
Translates to: PVGKAIPVTATG*DLLYTSSMLSC
Trigger: ACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCAACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000497626.1
ENST00000537881.5
ENST00000630942.2
CDS CAA 90 bp TTGACGTCTCCCGTTGGGAAAGCCATTCCGGTAACAGCGACAGGCTaGGACTTATTGTACACCAGCTCCATGCTCTCCTGTGGAGTTGAG +
Preference number: 6 (lower is better)
Translates to: LTSPVGKAIPVTATG*DLLYTSSMLSCGVE
Trigger: CTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCAACGGGAGACGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000497626.1
ENST00000537881.5
ENST00000630942.2
CDS TCA 72 bp AGACTGATGCGTGGCAAGAGGAGTCTGGGTCTCCTTTaGGTAGGACACTACTTCCCTTGGCAGGAAATCCAC +
Preference number: 6 (lower is better)
Translates to: RLMRGKRSLGLL*VGHYFPWQEIH
Trigger: GTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000519371.1
ENST00000537881.5
ENST00000630942.2
CDS CAA 72 bp CAGACTGATGCGTGGCAAGAGGAGTCTGGGTCTCCTTaGAGTAGGACACTACTTCCCTTGGCAGGAAATCCA +
Preference number: 6 (lower is better)
Translates to: QTDAWQEESGSP*SRTLLPLAGNP
Trigger: TGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000519371.1
ENST00000537881.5
ENST00000630942.2
CDS TCA 72 bp GTCTCTCGTCGTTTGCGATCCAGATCAGAGTCGTCCTaGACGGGTTCTTTCTTCTGCTGCATATCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: VSRRLRSRSESS*TGSFFCCISAS
Trigger: AGAGGCTGATATGCAGCAGAAGAAAGAACCCGTTCAGGACGACTCTGATCTGGATCGCAAACGACGAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000413338.5
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000518089.5
ENST00000524053.5
ENST00000537881.5
ENST00000630942.2
CDS GCA 72 bp CAATGCTTTGCAGCAAAGCCTCTGTCTCTCGTCGTTTaGGATCCAGATCAGAGTCGTCCTGAACGGGTTCTT +
Preference number: 6 (lower is better)
Translates to: QCFAAKPLSLVV*DPDQSRPERVL
Trigger: AAGAACCCGTTCAGGACGACTCTGATCTGGATCGCAAACGACGAGAGACAGAGGCTTTGCTGCAAAGCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000413338.5
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000518089.5
ENST00000524053.5
ENST00000537881.5
ENST00000630942.2
CDS GCA 72 bp TGTGACAAACAGGTGAGAAAAGTCGATTGGGCCCACTaGCATGTGGCAGTTAATTCCTGTCACTGGCCCTTG +
Preference number: 6 (lower is better)
Translates to: CDKQVRKVDWAH*HVAVNSCHWPL
Trigger: CAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000497626.1
ENST00000537881.5
ENST00000630942.2
CDS CAA 72 bp AAAGCCATTCCGGTAACAGCGACAGGCTTGGACTTATaGTACACCAGCTCCATGCTCTCCTGTGGAGTTGAG +
Preference number: 6 (lower is better)
Translates to: KAIPVTATGLDL*YTSSMLSCGVE
Trigger: CTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000497626.1
ENST00000537881.5
ENST00000630942.2
CDS CAA 72 bp AAGACCAGCCTGGGGAATATAGCAATGCTTCGTCTCTaGTTAATGGCCCCAGATCGCCTGAGTCTTGGCTTC +
Preference number: 6 (lower is better)
Translates to: KTSLGNIAMLRL*LMAPDRLSLGF
Trigger: GAAGCCAAGACTCAGGCGATCTGGGGCCATTAACAAGAGACGAAGCATTGCTATATTCCCCAGGCTGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413338.5
CDS TCA 72 bp AGGACACTACTTCCCTTGGCAGGAAATCCACTTGGGTaGCCTTTGACACGCCCAGTTTATGCAGTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: RTLLPLAGNPLG*PLTRPVYAVFF
Trigger: GAAGAAGACTGCATAAACTGGGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000519371.1
ENST00000537881.5
ENST00000630942.2
CDS TCA 72 bp TCAGCTCAGGGTACTGGAGGGACCAGTCCATACAAGTaGCCACTCGATGCTTGGACCAATGTTCATCATAGA +
Preference number: 6 (lower is better)
Translates to: SAQGTGGTSPYK*PLDAWTNVHHR
Trigger: TCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAGTACCCTGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000519371.1
ENST00000537881.5
ENST00000630942.2
CDS TCA 72 bp GCCATGTGGCAGTTAATTCCTGTCACTGGCCCTTGGTaGCCTTCAAAGACCTCACCAATACCTGCTTTGCTT +
Preference number: 6 (lower is better)
Translates to: AMWQLIPVTGPW*PSKTSPIPALL
Trigger: AAGCAAAGCAGGTATTGGTGAGGTCTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000497626.1
ENST00000537881.5
ENST00000630942.2
CDS TCA 72 bp AAGCCAAGTGTCTCATGCATAACCCTCCTGGATTGGTaGCCCGTCAAATCCCTTAATGTAGTTGGGTCTGGC +
Preference number: 6 (lower is better)
Translates to: KPSVSCITLLDW*PVKSLNVVGSG
Trigger: GCCAGACCCAACTACATTAAGGGATTTGACGGGTCACCAATCCAGGAGGGTTATGCATGAGACACTTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497626.1
CDS TCA 72 bp TACTTCCCTTGGCAGGAAATCCACTTGGGTGACCTTTaGCACGCCCAGTTTATGCAGTCTTCTTCCAAGTTC +
Preference number: 6 (lower is better)
Translates to: YFPWQEIHLGDL*HAQFMQSSSKF
Trigger: GAACTTGGAAGAAGACTGCATAAACTGGGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
ENST00000537881.5
CDS GCA 72 bp AAATCCACTTGGGTGACCTTTGACACGCCCAGTTTATaGAGTCTTCTTCCAAGTTCTGAGTCTGACTGCAGC +
Preference number: 6 (lower is better)
Translates to: KSTWVTFDTPSL*SLLPSSESDCS
Trigger: GCTGCAGTCAGACTCAGAACTTGGAAGAAGACTGCATAAACTGGGCGTGTCAAAGGTCACCCAAGTGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324972.10
ENST00000447467.6
ENST00000457059.2
ENST00000537881.5
CDS CAA 72 bp TGCTTTTTGCGCTCTAGCTCAGCTTTTAAGTCACTTTaGTCAGACATGTTGGTTTCCTGGACGCGCTCGGCA +
Preference number: 6 (lower is better)
Translates to: CFLRSSSAFKSL*SDMLVSWTRSA
Trigger: TGCCGAGCGCGTCCAGGAAACCAACATGTCTGACAAAAGTGACTTAAAAGCTGAGCTAGAGCGCAAAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000413338.5
ENST00000437599.5
ENST00000447467.6
ENST00000537881.5
ENST00000630942.2
CDS CCA 72 bp AAAGCTGGTGCATTTCCAGTAATAAACACTGAGGCCTaGTTCCCTAGAATTTATGGGAGGGCCAGTTACTTC +
Preference number: 6 (lower is better)
Translates to: KAGAFPVINTEA*FPRIYGRASYF
Trigger: GAAGTAACTGGCCCTCCCATAAATTCTAGGGAACCAGGCCTCAGTGTTTATTACTGGAAATGCACCAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497626.1
CDS CAA 90 bp AGAAGGAAGCTGACAGATTATAAGAGACCTCCTCTTACTTTTGCCTaGGGCTTAGATCAAGTCAATGAACCAGGGGACAGAAGAGAAAGC +
Preference number: 6 (lower is better)
Translates to: RRKLTDYKRPPLTFA*GLDQVNEPGDRRES
Trigger: GCTTTCTCTTCTGTCCCCTGGTTCATTGACTTGATCTAAGCCCAAGGCAAAAGTAAGAGGAGGTCTCTTATAATCTGTCAGCTTCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497626.1
CDS TCA 72 bp GATGCTTGGACCAATGTTCATCATAGAACTGACGATTaGAAGAAAGATTGGCTCCAGCCTGAACATCCCCAT +
Preference number: 6 (lower is better)
Translates to: DAWTNVHHRTDD*KKDWLQPEHPH
Trigger: ATGGGGATGTTCAGGCTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324972.10
ENST00000359388.8
ENST00000437599.5
ENST00000447467.6
ENST00000457059.2
ENST00000519371.1
ENST00000537881.5
ENST00000630942.2
CDS CCA 72 bp AAACCAACCAGGCATAAATTAAATTCCATAGGTGGGTaGAAGCCAAGTGTCTCATGCATAACCCTCCTGGAT +
Preference number: 6 (lower is better)
Translates to: KPTRHKLNSIGG*KPSVSCITLLD
Trigger: ATCCAGGAGGGTTATGCATGAGACACTTGGCTTCCACCCACCTATGGAATTTAATTTATGCCTGGTTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497626.1
CDS CAA 72 bp TGCTTTTTGCGCTCTAGCTCAGCTTTTAAGTCACTTTaGTCAGACATGTTGGTTTCTTCCAATTTAGATGAT +
Preference number: 6 (lower is better)
Translates to: CFLRSSSAFKSL*SDMLVSSNLDD
Trigger: ATCATCTAAATTGGAAGAAACCAACATGTCTGACAAAAGTGACTTAAAAGCTGAGCTAGAGCGCAAAAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518089.5