RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DYDC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000133665

Ensembl transcript IDs: ENST00000256039.3, ENST00000372197.5, ENST00000372198.5, ENST00000372199.5, ENST00000411538.5, ENST00000444807.6, ENST00000616870.4

Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTTCTTTGTTTGATCACCAACAAATAGTGTGGGCTTCCAGAGCTTaGGGACTTCACAGCCTCCATACTAGCATTGGCCCCCTGGTCCCA +
Preference number: 1 (lower is better)
Translates to: VSLFDHQQIVWASRA*GLHSLHTSIGPLVP
Trigger: TGGGACCAGGGGGCCAATGCTAGTATGGAGGCTGTGAAGTCCCCAAGCTCTGGAAGCCCACACTATTTGTTGGTGATCAAACAAAGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
3UTR TCA 90 bp ACAGCCTCCATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTaGCTTGTCTTTTCTCTTTCCTTTGACTCGGCTGGACTTTGTAGC +
Preference number: 1 (lower is better)
Translates to: TASILALAPWSHFLS*LVFSLSFDSAGLCS
Trigger: GCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATGGAGGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
3UTR TCA 90 bp CCACTTTCTTTCAACTCCCACATCCTCATCACCTGTTTCTTTGTTTaGTCACCAACAAATAGTGTGGGCTTCCAGAGCTTGGGGACTTCA +
Preference number: 1 (lower is better)
Translates to: PLSFNSHILITCFFV*SPTNSVGFQSLGTS
Trigger: TGAAGTCCCCAAGCTCTGGAAGCCCACACTATTTGTTGGTGATCAAACAAAGAAACAGGTGATGAGGATGTGGGAGTTGAAAGAAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
3UTR CCA 90 bp ACATCCTCATCACCTGTTTCTTTGTTTGATCACCAACAAATAGTGTaGGCTTCCAGAGCTTGGGGACTTCACAGCCTCCATACTAGCATT +
Preference number: 1 (lower is better)
Translates to: TSSSPVSLFDHQQIV*ASRAWGLHSLHTSI
Trigger: AATGCTAGTATGGAGGCTGTGAAGTCCCCAAGCTCTGGAAGCCCACACTATTTGTTGGTGATCAAACAAAGAAACAGGTGATGAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
3UTR-3UTR TCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTAGGCTGGAGAGTCCCTaGACTTGCCTTTTACAGCCC +
Preference number: 2 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFRLESP*TCLLQP
Trigger: GGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCCT...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
3UTR-3UTR CCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTAGAAAAGGAGTAGGCTaGAGAGTCCCTGAACTTGCC +
Preference number: 2 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGRKGVG*RVPELA
Trigger: GGCAAGTTCAGGGACTCTCCAGCCTACTCCTTTTCT...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
3UTR-3UTR TCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTAGGCTGGAGAGTCCCTaGACTTGCCTTTTACAGCCC +
Preference number: 2 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSRLESP*TCLLQP
Trigger: GGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCCT...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
3UTR-3UTR CCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTAGCTGGCCATTTTCTTaGCTTCTAGCTTTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGSWPFS*LLALRE
Trigger: TTCTCTCAAAGCTAGAAGCCAAGAAAATGGCCAGCT...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
3UTR-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTAGCTGGCCATTTTCTTaGCTTCTAGCTTTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFSWPFS*LLALRE
Trigger: TTCTCTCAAAGCTAGAAGCCAAGAAAATGGCCAGCT...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
3UTR-3UTR CCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTAGAAAAGGAGTAGGCTaGAGAGTCCCTGAACTTGCC +
Preference number: 2 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSRKGVG*RVPELA
Trigger: GGCAAGTTCAGGGACTCTCCAGCCTACTCCTTTTCT...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
3UTR-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTAATCTTGGTTCTAGCTaGCCATTTTCTTGGCTTCTA +
Preference number: 2 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFNLGSS*PFSWLL
Trigger: TAGAAGCCAAGAAAATGGCCAGCTAGAACCAAGATT...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
3UTR-3UTR CCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTAGAAAAGGAGTAGGCTaGAGAGTCCCTGAACTTGCC +
Preference number: 2 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSRKGVG*RVPELA
Trigger: GGCAAGTTCAGGGACTCTCCAGCCTACTCCTTTTCT...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
3UTR-3UTR CCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTAATCTTGGTTCTAGCTaGCCATTTTCTTGGCTTCTA +
Preference number: 2 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSNLGSS*PFSWLL
Trigger: TAGAAGCCAAGAAAATGGCCAGCTAGAACCAAGATT...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
3UTR-3UTR CCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTAATCTTGGTTCTAGCTaGCCATTTTCTTGGCTTCTA +
Preference number: 2 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSNLGSS*PFSWLL
Trigger: TAGAAGCCAAGAAAATGGCCAGCTAGAACCAAGATT...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
3UTR-3UTR CAA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTTCTTGGCTTCTAGCTTaGAGAGAAGTAAATCAGAAG +
Preference number: 3 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGSWLLA*REVNQK
Trigger: CTTCTGATTTACTTCTCTCAAAGCTAGAAGCCAAGA...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
3UTR-3UTR CAA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCTTGGCTTCTAGCTTaGAGAGAAGTAAATCAGAAG +
Preference number: 3 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFSWLLA*REVNQK
Trigger: CTTCTGATTTACTTCTCTCAAAGCTAGAAGCCAAGA...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
3UTR CCA 72 bp TCACCTGTTTCTTTGTTTGATCACCAACAAATAGTGTaGGCTTCCAGAGCTTGGGGACTTCACAGCCTCCAT +
Preference number: 3 (lower is better)
Translates to: SPVSLFDHQQIV*ASRAWGLHSLH
Trigger: ATGGAGGCTGTGAAGTCCCCAAGCTCTGGAAGCCCACACTATTTGTTGGTGATCAAACAAAGAAACAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
3UTR-3UTR CAA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTTCTTGGCTTCTAGCTTaGAGAGAAGTAAATCAGAAG +
Preference number: 3 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSSWLLA*REVNQK
Trigger: CTTCTGATTTACTTCTCTCAAAGCTAGAAGCCAAGA...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
3UTR TCA 72 bp TTCAACTCCCACATCCTCATCACCTGTTTCTTTGTTTaGTCACCAACAAATAGTGTGGGCTTCCAGAGCTTG +
Preference number: 3 (lower is better)
Translates to: FNSHILITCFFV*SPTNSVGFQSL
Trigger: CAAGCTCTGGAAGCCCACACTATTTGTTGGTGATCAAACAAAGAAACAGGTGATGAGGATGTGGGAGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
3UTR TCA 72 bp AAAATGCTAAACCCTCACAGCTGTAGTTCATTCGCTTaGTACACCACTTTCTTTCAACTCCCACATCCTCAT +
Preference number: 3 (lower is better)
Translates to: KMLNPHSCSSFA*YTTFFQLPHPH
Trigger: ATGAGGATGTGGGAGTTGAAAGAAAGTGGTGTATCAAGCGAATGAACTACAGCTGTGAGGGTTTAGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR TCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTTCCTCCTGCTCCCCCTaGGCGGGGAGCGCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGSSCSP*AGSAAS
Trigger: AGACGCAGCGCTCCCCGCTCAGGGGGAGCAGGAGGA...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372197.5
ENST00000372199.5
CDS-3UTR GCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTCTGAGCGGGGAGCGCTaGGTCTCCTGCGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFLSGER*VSCGLR
Trigger: CCGCAGCCCGCAGGAGACGCAGCGCTCCCCGCTCAG...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR CCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTAGGCCGCTTCGCGCCTaGGGCTCCCGAAAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGRPLRA*GSRKRP
Trigger: TGGCCGCTTTCGGGAGCCCCAGGCGCGAAGCGGCCT...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372197.5
ENST00000372199.5
CDS-3UTR TCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCCTCCTGCTCCCCCTaGGCGGGGAGCGCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFSSCSP*AGSAAS
Trigger: AGACGCAGCGCTCCCCGCTCAGGGGGAGCAGGAGGA...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR GCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTGTATCTGGCACCCCTaGCCGGGTGCCCCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFCIWHP*PGAPAQ
Trigger: CTGGGCGGGGGCACCCGGGCAGGGGTGCCAGATACA...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTAGGCCGCTTCGCGCCTaGGGCTCCCGAAAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFRPLRA*GSRKRP
Trigger: TGGCCGCTTTCGGGAGCCCCAGGCGCGAAGCGGCCT...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR TCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTGTGGGAAAACCACACTaGGCGCCCCGGGAGGTTGCC +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGVGKPH*APREVA
Trigger: GGCAACCTCCCGGGGCGCTCAGTGTGGTTTTCCCAC...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372197.5
ENST00000372199.5
CDS-3UTR GCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTGAGCGCTGCGTCTCCTaGGGGCTGCGGGAGACCCTT +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFERCVS*GLRETL
Trigger: AAGGGTCTCCCGCAGCCCGCAGGAGACGCAGCGCTC...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTGTGCCCCCGCCCAGTTaGCTGGCTGGCTGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFVPPPS*LAGWLA
Trigger: AGCTAGCCAGCCAGCCAGCCAACTGGGCGGGGGCAC...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR GCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTCGCCACCTCTGCCAGTaGCTGGGCCAGGCAATTTCC +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFRHLCQ*LGQAIS
Trigger: GGAAATTGCCTGGCCCAGGCACTGGCAGAGGTGGCG...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR GCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTAACCTTCGCCACCTCTaGCAGTGCCTGGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFNLRHL*QCLGQA
Trigger: TGCCTGGCCCAGGCACTGGCAGAGGTGGCGAAGGTT...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR GCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCTGTATCTGGCACCCCTaGCCGGGTGCCCCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSCIWHP*PGAPAQ
Trigger: CTGGGCGGGGGCACCCGGGCAGGGGTGCCAGATACA...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR GCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTTGTATCTGGCACCCCTaGCCGGGTGCCCCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSCIWHP*PGAPAQ
Trigger: CTGGGCGGGGGCACCCGGGCAGGGGTGCCAGATACA...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR GCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTCTGAGCGGGGAGCGCTaGGTCTCCTGCGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSLSGER*VSCGLR
Trigger: CCGCAGCCCGCAGGAGACGCAGCGCTCCCCGCTCAG...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372197.5
ENST00000372199.5
CDS-3UTR CCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTAGTTGGCTGGCTGGCTaGCTAGCTGTCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGSWLAG*LAVSQV
Trigger: CACCTGGGAGACAGCTAGCCAGCCAGCCAGCCAACT...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372197.5
ENST00000372199.5
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTGCCCAGTTGGCTGGCTaGCTGGCTAGCTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFAQLAG*LASCLP
Trigger: TGGGAGACAGCTAGCCAGCCAGCCAGCCAACTGGGC...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR TCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGGCCAGCAGACTCTaGAGGAGGAACCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGLASRL*RRNLLR
Trigger: CCTCAACAGGTTCCTCCTTCAGAGTCTGCTGGCCAG...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR GCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCGCGCCCCTTCCGCTTTaGGGCGCCTACACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSAPLPL*GAYTGS
Trigger: GGAGCCAGTGTAGGCGCCGCAAAGCGGAAGGGGCGC...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256039.3
ENST00000616870.4
CDS-3UTR GCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCGAGCGCTGCGTCTCCTaGGGGCTGCGGGAGACCCTT +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSERCVS*GLRETL
Trigger: AAGGGTCTCCCGCAGCCCGCAGGAGACGCAGCGCTC...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTGTGGTTGCCAGGGGCTaGGGAGAGAGAGAAATGGCG +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFVVARG*GEREMA
Trigger: CGCCATTTCTCTCTCTCCCCAGCCCCTGGCAACCAC...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCGTGCCCCCGCCCAGTTaGCTGGCTGGCTGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSVPPPS*LAGWLA
Trigger: AGCTAGCCAGCCAGCCAGCCAACTGGGCGGGGGCAC...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR CCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTAGGCCGCTTCGCGCCTaGGGCTCCCGAAAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSRPLRA*GSRKRP
Trigger: TGGCCGCTTTCGGGAGCCCCAGGCGCGAAGCGGCCT...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372197.5
ENST00000372199.5
CDS-3UTR TCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTAGGCTGGAGAGTCCCTaGACTTGCCTTTTACAGCCC +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGRLESP*TCLLQP
Trigger: GGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCCT...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR TCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCGTGGGAAAACCACACTaGGCGCCCCGGGAGGTTGCC +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSVGKPH*APREVA
Trigger: GGCAACCTCCCGGGGCGCTCAGTGTGGTTTTCCCAC...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR TCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTGTGGGAAAACCACACTaGGCGCCCCGGGAGGTTGCC +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSVGKPH*APREVA
Trigger: GGCAACCTCCCGGGGCGCTCAGTGTGGTTTTCCCAC...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR GCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTGCGCCCCTTCCGCTTTaGGGCGCCTACACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSAPLPL*GAYTGS
Trigger: GGAGCCAGTGTAGGCGCCGCAAAGCGGAAGGGGCGC...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256039.3
ENST00000616870.4
CDS-3UTR GCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTAGAAAGAATGGTGGTTaGCAGGGGCTGGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGRKNGG*QGLGRE
Trigger: CTCTCTCCCCAGCCCCTGGCAACCACCATTCTTTCT...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR GCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTGCGTCTCCTGCGGGCTaGGGGAGACCCTTCCAGACT +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSASPAG*GRPFQT
Trigger: AGTCTGGAAGGGTCTCCCGCAGCCCGCAGGAGACGC...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR GCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCGCGTCTCCTGCGGGCTaGGGGAGACCCTTCCAGACT +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSASPAG*GRPFQT
Trigger: AGTCTGGAAGGGTCTCCCGCAGCCCGCAGGAGACGC...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR CCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTTATACCGCCCACGCTTaGCACACTGGGAGCTCTATC +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGYTAHA*HTGSSI
Trigger: GATAGAGCTCCCAGTGTGCCAAGCGTGGGCGGTATA...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256039.3
CDS-3UTR CCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTTGGGCTTCCAGAGCTTaGGGACTTCACAGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGWASRA*GLHSLH
Trigger: ATGGAGGCTGTGAAGTCCCCAAGCTCTGGAAGCCCA...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTGTGCCCCCGCCCAGTTaGCTGGCTGGCTGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSVPPPS*LAGWLA
Trigger: AGCTAGCCAGCCAGCCAGCCAACTGGGCGGGGGCAC...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372197.5
ENST00000372199.5
CDS-3UTR CCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTATACAATACTGTATCTaGCACCCCTGCCCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGIQYCI*HPCPGA
Trigger: GGCACCCGGGCAGGGGTGCCAGATACAGTATTGTAT...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372197.5
ENST00000372199.5
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTTCCAGACTCCCGGGTaGGAAAACCACACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFFQTPG*ENHTER
Trigger: GCGCTCAGTGTGGTTTTCCCACCCGGGAGTCTGGAA...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR GCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTCGCCACCTCTGCCAGTaGCTGGGCCAGGCAATTTCC +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSRHLCQ*LGQAIS
Trigger: GGAAATTGCCTGGCCCAGGCACTGGCAGAGGTGGCG...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR GCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCAACCTTCGCCACCTCTaGCAGTGCCTGGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSNLRHL*QCLGQA
Trigger: TGCCTGGCCCAGGCACTGGCAGAGGTGGCGAAGGTT...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR GCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTAACCTTCGCCACCTCTaGCAGTGCCTGGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSNLRHL*QCLGQA
Trigger: TGCCTGGCCCAGGCACTGGCAGAGGTGGCGAAGGTT...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR GCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTCCTGGCAGGAATTCCTaGTTCAAGGCCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGPGRNS*FKASFS
Trigger: TGAGAAGGAGGCCTTGAAGCAGGAATTCCTGCCAGG...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR GCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTAGCGCCCCGGGAGGTTaGCAGATACAATACTGTATC +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGSAPGG*QIQYCI
Trigger: GATACAGTATTGTATCTGGCAACCTCCCGGGGCGCT...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372197.5
ENST00000372199.5
CDS-3UTR CCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTATTCTATTGGGTCACTaGGCCGAACCTTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGILLGH*AEPSPP
Trigger: AGGTGGCGAAGGTTCGGCCCAGTGACCCAATAGAAT...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTGGGCTTCCAGAGCTTaGGGACTTCACAGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFWASRA*GLHSLH
Trigger: ATGGAGGCTGTGAAGTCCCCAAGCTCTGGAAGCCCA...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTCAGAGACAGAAAGAATaGTGGTTGCCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFQRQKE*WLPGAG
Trigger: CCCAGCCCCTGGCAACCACCATTCTTTCTGTCTCTG...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTCCTTCCATCTCTGTaGCACCTTCTTCACGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGLLPSL*HLLHAG
Trigger: TCCAGCGTGAAGAAGGTGCCACAGAGATGGAAGGAG...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372197.5
ENST00000372199.5
CDS-3UTR CCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTGCCCAGTTGGCTGGCTaGCTGGCTAGCTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSAQLAG*LASCLP
Trigger: TGGGAGACAGCTAGCCAGCCAGCCAGCCAACTGGGC...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR TCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTGAAGGAGGAACCTGTTaGGGCATTCCTGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGEGGTC*GIPGIR
Trigger: TCTGATTCCAGGAATGCCTCAACAGGTTCCTCCTTC...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR GCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTCGCCACCTCTGCCAGTaGCTGGGCCAGGCAATTTCC +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSRHLCQ*LGQAIS
Trigger: GGAAATTGCCTGGCCCAGGCACTGGCAGAGGTGGCG...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR GCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTCCTGGCAGGAATTCCTaGTTCAAGGCCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFPGRNS*FKASFS
Trigger: TGAGAAGGAGGCCTTGAAGCAGGAATTCCTGCCAGG...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTCATCCTGGCAGCCAATaGGGGGAGAGGCTATTTTTC +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFHPGSQ*GERLFF
Trigger: GAAAAATAGCCTCTCCCCCCATTGGCTGCCAGGATG...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000256039.3
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTATTCTATTGGGTCACTaGGCCGAACCTTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFILLGH*AEPSPP
Trigger: AGGTGGCGAAGGTTCGGCCCAGTGACCCAATAGAAT...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTAGCCAGGTATTCTATTaGGTCACTGGGCCGAACCTT +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGSQVFY*VTGPNL
Trigger: AAGGTTCGGCCCAGTGACCCAATAGAATACCTGGCT...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTGTGGTTGCCAGGGGCTaGGGAGAGAGAGAAATGGCG +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSVVARG*GEREMA
Trigger: CGCCATTTCTCTCTCTCCCCAGCCCCTGGCAACCAC...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCGTGGTTGCCAGGGGCTaGGGAGAGAGAGAAATGGCG +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSVVARG*GEREMA
Trigger: CGCCATTTCTCTCTCTCCCCAGCCCCTGGCAACCAC...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTCTCCTTCCATCTCTGTaGCACCTTCTTCACGCTGGA +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFLLPSL*HLLHAG
Trigger: TCCAGCGTGAAGAAGGTGCCACAGAGATGGAAGGAG...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTGCTGTCTCCCAGGTGTaGGTAAGGAATCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFAVSQV*VRNLLP
Trigger: TGGAAGGAGATTCCTTACCCACACCTGGGAGACAGC...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR CCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCAGTTGGCTGGCTGGCTaGCTAGCTGTCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSSWLAG*LAVSQV
Trigger: CACCTGGGAGACAGCTAGCCAGCCAGCCAGCCAACT...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR CCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTGCCCAGTTGGCTGGCTaGCTGGCTAGCTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSAQLAG*LASCLP
Trigger: TGGGAGACAGCTAGCCAGCCAGCCAGCCAACTGGGC...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372197.5
ENST00000372199.5
CDS-3UTR TCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTTTGTGTCCTCCTGCATaGATATGGTCTTCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGLCPPA*IWSSSW
Trigger: CCACGAAGAAGACCATATTCATGCAGGAGGACACAA...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR TCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTGAAGGAGGAACCTGTTaGGGCATTCCTGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFEGGTC*GIPGIR
Trigger: TCTGATTCCAGGAATGCCTCAACAGGTTCCTCCTTC...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR TCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCCTGGCCAGCAGACTCTaGAGGAGGAACCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSLASRL*RRNLLR
Trigger: CCTCAACAGGTTCCTCCTTCAGAGTCTGCTGGCCAG...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR TCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTCTGGCCAGCAGACTCTaGAGGAGGAACCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSLASRL*RRNLLR
Trigger: CCTCAACAGGTTCCTCCTTCAGAGTCTGCTGGCCAG...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTAGCCAGGTATTCTATTaGGTCACTGGGCCGAACCTT +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFSQVFY*VTGPNL
Trigger: AAGGTTCGGCCCAGTGACCCAATAGAATACCTGGCT...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTCAGACTGGAAGTACCTaGCAGGAATTCCTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGQTGST*QEFLLQ
Trigger: TTGAAGCAGGAATTCCTGCCAGGTACTTCCAGTCTG...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTAAGTTCTGGTCAATCTaGCCAGCAGACTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGKFWSI*PADSEG
Trigger: TCCTTCAGAGTCTGCTGGCCAGATTGACCAGAACTT...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTGGCATTTTGAAGTTCTaGTCAATCTGGCCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGGILKF*SIWPAD
Trigger: GTCTGCTGGCCAGATTGACCAGAACTTCAAAATGCC...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTAGAAAAGGAGTAGGCTaGAGAGTCCCTGAACTTGCC +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFRKGVG*RVPELA
Trigger: GGCAAGTTCAGGGACTCTCCAGCCTACTCCTTTTCT...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTGTGGTTGCCAGGGGCTaGGGAGAGAGAGAAATGGCG +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSVVARG*GEREMA
Trigger: CGCCATTTCTCTCTCTCCCCAGCCCCTGGCAACCAC...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTGTCTCAGAATCATGGTaGGAGGCGAAAGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFVSESW*EAKGTS
Trigger: AGAAGTGCCTTTCGCCTCCCACCATGATTCTGAGAC...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
CDS-3UTR CCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCTTCCAGACTCCCGGGTaGGAAAACCACACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSFQTPG*ENHTER
Trigger: GCGCTCAGTGTGGTTTTCCCACCCGGGAGTCTGGAA...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR TCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTTGTGTCCTCCTGCATaGATATGGTCTTCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFLCPPA*IWSSSW
Trigger: CCACGAAGAAGACCATATTCATGCAGGAGGACACAA...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR TCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTCTGGCCAGCAGACTCTaGAGGAGGAACCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSLASRL*RRNLLR
Trigger: CCTCAACAGGTTCCTCCTTCAGAGTCTGCTGGCCAG...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR GCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCAGAAAGAATGGTGGTTaGCAGGGGCTGGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSRKNGG*QGLGRE
Trigger: CTCTCTCCCCAGCCCCTGGCAACCACCATTCTTTCT...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTCAGACTGGAAGTACCTaGCAGGAATTCCTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFQTGST*QEFLLQ
Trigger: TTGAAGCAGGAATTCCTGCCAGGTACTTCCAGTCTG...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTTTCCTGGAATCAGACTaGAAGTACCTGGCAGGAATT +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGFLESD*KYLAGI
Trigger: AATTCCTGCCAGGTACTTCCAGTCTGATTCCAGGAA...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTCTGTTGAGGCATTCCTaGAATCAGACTGGAAGTACC +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFLLRHS*NQTGST
Trigger: GGTACTTCCAGTCTGATTCCAGGAATGCCTCAACAG...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTAAGTTCTGGTCAATCTaGCCAGCAGACTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFKFWSI*PADSEG
Trigger: TCCTTCAGAGTCTGCTGGCCAGATTGACCAGAACTT...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTTGGGCTTCCAGAGCTTaGGGACTTCACAGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSWASRA*GLHSLH
Trigger: ATGGAGGCTGTGAAGTCCCCAAGCTCTGGAAGCCCA...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCTGGGCTTCCAGAGCTTaGGGACTTCACAGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSWASRA*GLHSLH
Trigger: ATGGAGGCTGTGAAGTCCCCAAGCTCTGGAAGCCCA...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTCAGAGACAGAAAGAATaGTGGTTGCCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSQRQKE*WLPGAG
Trigger: CCCAGCCCCTGGCAACCACCATTCTTTCTGTCTCTG...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCCAGAGACAGAAAGAATaGTGGTTGCCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSQRQKE*WLPGAG
Trigger: CCCAGCCCCTGGCAACCACCATTCTTTCTGTCTCTG...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCATACAATACTGTATCTaGCACCCCTGCCCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSIQYCI*HPCPGA
Trigger: GGCACCCGGGCAGGGGTGCCAGATACAGTATTGTAT...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR TCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTTTTCTTGTGGCATTTTaGAGTTCTGGTCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGFLVAF*SSGQSG
Trigger: GCCAGATTGACCAGAACTTCAAAATGCCACAAGAAA...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR TCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTAGGCTGGAGAGTCCCTaGACTTGCCTTTTACAGCCC +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSRLESP*TCLLQP
Trigger: GGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCCT...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR TCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTGCAAAAGTTAAGACATaGACACACGAGATGGATGTG +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGAKVKT*THEMDV
Trigger: CACATCCATCTCGTGTGTTCATGTCTTAACTTTTGC...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR TCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTTTCAGTTTTGCAAGATaGAAGAGTTTTGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGFSFAR*KSFAAG
Trigger: TCCGGCTGCAAAACTCTTTCATCTTGCAAAACTGAA...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR TCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTAGGGCTTTCTTATGTTaGGCCAAGATGCTTTTTAGG +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGRAFLC*AKMLFR
Trigger: CCTAAAAAGCATCTTGGCTCAACATAAGAAAGCCCT...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372199.5
CDS-3UTR GCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCCCTGGCAGGAATTCCTaGTTCAAGGCCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSPGRNS*FKASFS
Trigger: TGAGAAGGAGGCCTTGAAGCAGGAATTCCTGCCAGG...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR GCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTAGAAAGAATGGTGGTTaGCAGGGGCTGGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSRKNGG*QGLGRE
Trigger: CTCTCTCCCCAGCCCCTGGCAACCACCATTCTTTCT...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR GCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTAGCGCCCCGGGAGGTTaGCAGATACAATACTGTATC +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSSAPGG*QIQYCI
Trigger: GATACAGTATTGTATCTGGCAACCTCCCGGGGCGCT...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR GCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCAGCGCCCCGGGAGGTTaGCAGATACAATACTGTATC +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSSAPGG*QIQYCI
Trigger: GATACAGTATTGTATCTGGCAACCTCCCGGGGCGCT...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR GCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTGCAGCAGTTCCACATTaGTGGGGAGGTCTCAGAATC +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSAAVPH*WGGLRI
Trigger: GATTCTGAGACCTCCCCAGCAATGTGGAACTGCTGC...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372198.5
CDS-3UTR CCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTATTCTATTGGGTCACTaGGCCGAACCTTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSILLGH*AEPSPP
Trigger: AGGTGGCGAAGGTTCGGCCCAGTGACCCAATAGAAT...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTTCCTGGAATCAGACTaGAAGTACCTGGCAGGAATT +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFFLESD*KYLAGI
Trigger: AATTCCTGCCAGGTACTTCCAGTCTGATTCCAGGAA...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTCCTAAAAAGGAGATTTaGAGCCAGGAGGCATTTCAT +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGPKKEI*SQEAFH
Trigger: ATGAAATGCCTCCTGGCTCCAAATCTCCTTTTTAGG...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTCTCCTTCCATCTCTGTaGCACCTTCTTCACGCTGGA +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSLLPSL*HLLHAG
Trigger: TCCAGCGTGAAGAAGGTGCCACAGAGATGGAAGGAG...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR TCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTGAAGGAGGAACCTGTTaGGGCATTCCTGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSEGGTC*GIPGIR
Trigger: TCTGATTCCAGGAATGCCTCAACAGGTTCCTCCTTC...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR TCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCGAAGGAGGAACCTGTTaGGGCATTCCTGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSEGGTC*GIPGIR
Trigger: TCTGATTCCAGGAATGCCTCAACAGGTTCCTCCTTC...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR TCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTTTCTTGTGGCATTTTaGAGTTCTGGTCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFFLVAF*SSGQSG
Trigger: GCCAGATTGACCAGAACTTCAAAATGCCACAAGAAA...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR TCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTGCAAAAGTTAAGACATaGACACACGAGATGGATGTG +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFAKVKT*THEMDV
Trigger: CACATCCATCTCGTGTGTTCATGTCTTAACTTTTGC...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR TCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTTCAGTTTTGCAAGATaGAAGAGTTTTGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFFSFAR*KSFAAG
Trigger: TCCGGCTGCAAAACTCTTTCATCTTGCAAAACTGAA...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR GCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTCCTGGCAGGAATTCCTaGTTCAAGGCCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSPGRNS*FKASFS
Trigger: TGAGAAGGAGGCCTTGAAGCAGGAATTCCTGCCAGG...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR GCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTTTAACTCAAGGTCTTaGAGAAGTGGCAAGAGTTCG +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFFNSRS*RSGKSS
Trigger: CGAACTCTTGCCACTTCTGCAAGACCTTGAGTTAAA...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000372199.5
CDS-3UTR CCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCAGCCAGGTATTCTATTaGGTCACTGGGCCGAACCTT +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSSQVFY*VTGPNL
Trigger: AAGGTTCGGCCCAGTGACCCAATAGAATACCTGGCT...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTCCTAAAAAGGAGATTTaGAGCCAGGAGGCATTTCAT +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFPKKEI*SQEAFH
Trigger: ATGAAATGCCTCCTGGCTCCAAATCTCCTTTTTAGG...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTAATCTTGGTTCTAGCTaGCCATTTTCTTGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGNLGSS*PFSWLL
Trigger: TAGAAGCCAAGAAAATGGCCAGCTAGAACCAAGATT...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCAGAAAAGGAGTAGGCTaGAGAGTCCCTGAACTTGCC +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSRKGVG*RVPELA
Trigger: GGCAAGTTCAGGGACTCTCCAGCCTACTCCTTTTCT...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTAAGGTCTTGCAGAAGTaGCAAGAGTTCGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSKVLQK*QEFAQW
Trigger: CCACTGGGCGAACTCTTGCCACTTCTGCAAGACCTT...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372199.5
CDS-3UTR TCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTTTGTGTCCTCCTGCATaGATATGGTCTTCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSLCPPA*IWSSSW
Trigger: CCACGAAGAAGACCATATTCATGCAGGAGGACACAA...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR TCA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTACCTGTTTCTTTGTTTaGTCACCAACAAATAGTGTG +
Preference number: 4 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGTCFFV*SPTNSV
Trigger: CACACTATTTGTTGGTGATCAAACAAAGAAACAGGT...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR GCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCTCCTTAGTTCCACATTaGTGGGGAGGTCTCAGAATC +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSSLVPH*WGGLRI
Trigger: GATTCTGAGACCTCCCCAGCAATGTGGAACTAAGGA...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372199.5
CDS-3UTR CCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTAGCCAGGTATTCTATTaGGTCACTGGGCCGAACCTT +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSSQVFY*VTGPNL
Trigger: AAGGTTCGGCCCAGTGACCCAATAGAATACCTGGCT...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCCAGACTGGAAGTACCTaGCAGGAATTCCTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSQTGST*QEFLLQ
Trigger: TTGAAGCAGGAATTCCTGCCAGGTACTTCCAGTCTG...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTCAGACTGGAAGTACCTaGCAGGAATTCCTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSQTGST*QEFLLQ
Trigger: TTGAAGCAGGAATTCCTGCCAGGTACTTCCAGTCTG...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCCTGTTGAGGCATTCCTaGAATCAGACTGGAAGTACC +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSLLRHS*NQTGST
Trigger: GGTACTTCCAGTCTGATTCCAGGAATGCCTCAACAG...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTCTGTTGAGGCATTCCTaGAATCAGACTGGAAGTACC +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSLLRHS*NQTGST
Trigger: GGTACTTCCAGTCTGATTCCAGGAATGCCTCAACAG...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTAAGTTCTGGTCAATCTaGCCAGCAGACTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSKFWSI*PADSEG
Trigger: TCCTTCAGAGTCTGCTGGCCAGATTGACCAGAACTT...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTGGCATTTTGAAGTTCTaGTCAATCTGGCCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSGILKF*SIWPAD
Trigger: GTCTGCTGGCCAGATTGACCAGAACTTCAAAATGCC...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTGTCTCAGAATCATGGTaGGAGGCGAAAGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSVSESW*EAKGTS
Trigger: AGAAGTGCCTTTCGCCTCCCACCATGATTCTGAGAC...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
CDS-3UTR TCA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTACCTGTTTCTTTGTTTaGTCACCAACAAATAGTGTG +
Preference number: 4 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFTCFFV*SPTNSV
Trigger: CACACTATTTGTTGGTGATCAAACAAAGAAACAGGT...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR GCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCTGTTTAGTTCCACATTaGTGGGGAGGTCTCAGAATC +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSCLVPH*WGGLRI
Trigger: GATTCTGAGACCTCCCCAGCAATGTGGAACTAAACA...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372197.5
CDS-3UTR CCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTCAGACTGGAAGTACCTaGCAGGAATTCCTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSQTGST*QEFLLQ
Trigger: TTGAAGCAGGAATTCCTGCCAGGTACTTCCAGTCTG...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCTTCCTGGAATCAGACTaGAAGTACCTGGCAGGAATT +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSFLESD*KYLAGI
Trigger: AATTCCTGCCAGGTACTTCCAGTCTGATTCCAGGAA...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTTTCCTGGAATCAGACTaGAAGTACCTGGCAGGAATT +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSFLESD*KYLAGI
Trigger: AATTCCTGCCAGGTACTTCCAGTCTGATTCCAGGAA...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTAAGTTCTGGTCAATCTaGCCAGCAGACTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSKFWSI*PADSEG
Trigger: TCCTTCAGAGTCTGCTGGCCAGATTGACCAGAACTT...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTGGCATTTTGAAGTTCTaGTCAATCTGGCCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSGILKF*SIWPAD
Trigger: GTCTGCTGGCCAGATTGACCAGAACTTCAAAATGCC...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTTCTTCAAAAGCACCTTaGGGCCTGTTTAACTCAAGG +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSSSKAP*GLFNSR
Trigger: CCTTGAGTTAAACAGGCCCCAAGGTGCTTTTGAAGA...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372199.5
CDS-3UTR TCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTGAAGTCAGTTCCTTGTaGCACTTTTCACAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSEVSSL*HFSQFC
Trigger: ACAGAACTGTGAAAAGTGTCACAAGGAACTGACTTC...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR TCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCTTTCTTGTGGCATTTTaGAGTTCTGGTCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSFLVAF*SSGQSG
Trigger: GCCAGATTGACCAGAACTTCAAAATGCCACAAGAAA...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR TCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTGCAAAAGTTAAGACATaGACACACGAGATGGATGTG +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSAKVKT*THEMDV
Trigger: CACATCCATCTCGTGTGTTCATGTCTTAACTTTTGC...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR TCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTTTCAGTTTTGCAAGATaGAAGAGTTTTGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSFSFAR*KSFAAG
Trigger: TCCGGCTGCAAAACTCTTTCATCTTGCAAAACTGAA...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTCCTAAAAAGGAGATTTaGAGCCAGGAGGCATTTCAT +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSPKKEI*SQEAFH
Trigger: ATGAAATGCCTCCTGGCTCCAAATCTCCTTTTTAGG...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTAGCTGGCCATTTTCTTaGCTTCTAGCTTTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSSWPFS*LLALRE
Trigger: TTCTCTCAAAGCTAGAAGCCAAGAAAATGGCCAGCT...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCAGCTGGCCATTTTCTTaGCTTCTAGCTTTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSSWPFS*LLALRE
Trigger: TTCTCTCAAAGCTAGAAGCCAAGAAAATGGCCAGCT...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR TCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTGAAGTCAGTTCCTTGTaGCACTTTTCACAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSEVSSL*HFSQFC
Trigger: ACAGAACTGTGAAAAGTGTCACAAGGAACTGACTTC...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR TCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTGCAAAAGTTAAGACATaGACACACGAGATGGATGTG +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSAKVKT*THEMDV
Trigger: CACATCCATCTCGTGTGTTCATGTCTTAACTTTTGC...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR TCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTTTCAGTTTTGCAAGATaGAAGAGTTTTGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSFSFAR*KSFAAG
Trigger: TCCGGCTGCAAAACTCTTTCATCTTGCAAAACTGAA...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTAGCTGGCCATTTTCTTaGCTTCTAGCTTTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSSWPFS*LLALRE
Trigger: TTCTCTCAAAGCTAGAAGCCAAGAAAATGGCCAGCT...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCAATCTTGGTTCTAGCTaGCCATTTTCTTGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSNLGSS*PFSWLL
Trigger: TAGAAGCCAAGAAAATGGCCAGCTAGAACCAAGATT...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR TCA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCACCTGTTTCTTTGTTTaGTCACCAACAAATAGTGTG +
Preference number: 4 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSTCFFV*SPTNSV
Trigger: CACACTATTTGTTGGTGATCAAACAAAGAAACAGGT...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR TCA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTACCTGTTTCTTTGTTTaGTCACCAACAAATAGTGTG +
Preference number: 4 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSTCFFV*SPTNSV
Trigger: CACACTATTTGTTGGTGATCAAACAAAGAAACAGGT...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR TCA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTACCTGTTTCTTTGTTTaGTCACCAACAAATAGTGTG +
Preference number: 4 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSTCFFV*SPTNSV
Trigger: CACACTATTTGTTGGTGATCAAACAAAGAAACAGGT...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS CCA 90 bp TCTGGCACCCCTGCCCGGGTGCCCCCGCCCAGTTGGCTGGCTGGCTaGCTAGCTGTCTCCCAGGTGTGGGTAAGGAATCTCCTTCCATCT +
Preference number: 5 (lower is better)
Translates to: SGTPARVPPPSWLAG*LAVSQVWVRNLLPS
Trigger: AGATGGAAGGAGATTCCTTACCCACACCTGGGAGACAGCTAGCCAGCCAGCCAGCCAACTGGGCGGGGGCACCCGGGCAGGGGTGCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS CCA 90 bp TGTATCTGGCACCCCTGCCCGGGTGCCCCCGCCCAGTTGGCTGGCTaGCTGGCTAGCTGTCTCCCAGGTGTGGGTAAGGAATCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: CIWHPCPGAPAQLAG*LASCLPGVGKESPS
Trigger: GGAAGGAGATTCCTTACCCACACCTGGGAGACAGCTAGCCAGCCAGCCAGCCAACTGGGCGGGGGCACCCGGGCAGGGGTGCCAGATACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR CAA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTGGTGCCCCCGCCCAGTaGGCTGGCTGGCTGGCTAGC +
Preference number: 5 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFGAPAQ*AGWLAS
Trigger: GCTAGCCAGCCAGCCAGCCAACTGGGCGGGGGCACC...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS CCA 90 bp TACAATACTGTATCTGGCACCCCTGCCCGGGTGCCCCCGCCCAGTTaGCTGGCTGGCTGGCTAGCTGTCTCCCAGGTGTGGGTAAGGAAT +
Preference number: 5 (lower is better)
Translates to: YNTVSGTPARVPPPS*LAGWLAVSQVWVRN
Trigger: ATTCCTTACCCACACCTGGGAGACAGCTAGCCAGCCAGCCAGCCAACTGGGCGGGGGCACCCGGGCAGGGGTGCCAGATACAGTATTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS CCA 90 bp CCCCCGCCCAGTTGGCTGGCTGGCTGGCTAGCTGTCTCCCAGGTGTaGGTAAGGAATCTCCTTCCATCTCTGTGGCACCTTCTTCACGCT +
Preference number: 5 (lower is better)
Translates to: PPPSWLAGWLAVSQV*VRNLLPSLWHLLHA
Trigger: AGCGTGAAGAAGGTGCCACAGAGATGGAAGGAGATTCCTTACCCACACCTGGGAGACAGCTAGCCAGCCAGCCAGCCAACTGGGCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR CAA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCGGTGCCCCCGCCCAGTaGGCTGGCTGGCTGGCTAGC +
Preference number: 5 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSGAPAQ*AGWLAS
Trigger: GCTAGCCAGCCAGCCAGCCAACTGGGCGGGGGCACC...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR CAA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTGGTGCCCCCGCCCAGTaGGCTGGCTGGCTGGCTAGC +
Preference number: 5 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSGAPAQ*AGWLAS
Trigger: GCTAGCCAGCCAGCCAGCCAACTGGGCGGGGGCACC...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR CAA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTGTGGGCTTCCAGAGCTaGGGGACTTCACAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGVGFQS*GTSQPP
Trigger: TGGAGGCTGTGAAGTCCCCAAGCTCTGGAAGCCCAC...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTCGCGCCCCTTCCGCTTaGCGGCGCCTACACTGGCTC +
Preference number: 5 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSRAPSA*RRLHWL
Trigger: GAGCCAGTGTAGGCGCCGCAAAGCGGAAGGGGCGCG...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256039.3
ENST00000616870.4
CDS-3UTR CAA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTCAGAAAGAATGGTGGTaGCCAGGGGCTGGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGQKEWW*PGAGER
Trigger: TCTCTCCCCAGCCCCTGGCAACCACCATTCTTTCTG...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS CCA 90 bp GATAAGAATAGGGGTTGTCTTTGTTTACTGTATACCGCCCACGCTTaGCACACTGGGAGCTCTATCCGCGCGCCCCTTCCGCTTTGCGGC +
Preference number: 5 (lower is better)
Translates to: DKNRGCLCLLYTAHA*HTGSSIRAPLPLCG
Trigger: GCCGCAAAGCGGAAGGGGCGCGCGGATAGAGCTCCCAGTGTGCCAAGCGTGGGCGGTATACAGTAAACAAAGACAACCCCTATTCTTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256039.3
CDS-3UTR CAA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTCAGAAAGAATGGTGGTaGCCAGGGGCTGGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFQKEWW*PGAGER
Trigger: TCTCTCCCCAGCCCCTGGCAACCACCATTCTTTCTG...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTGAGCGCCCCGGGAGGTaGCCAGATACAATACTGTAT +
Preference number: 5 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGERPGR*PDTILY
Trigger: ATACAGTATTGTATCTGGCAACCTCCCGGGGCGCTC...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372197.5
ENST00000372199.5
CDS CCA 90 bp TCCTGTAATGATAAAGCCAGTGAGCCAGGTATTCTATTGGGTCACTaGGCCGAACCTTCGCCACCTCTGCCAGTGCCTGGGCCAGGCAAT +
Preference number: 5 (lower is better)
Translates to: SCNDKASEPGILLGH*AEPSPPLPVPGPGN
Trigger: ATTGCCTGGCCCAGGCACTGGCAGAGGTGGCGAAGGTTCGGCCCAGTGACCCAATAGAATACCTGGCTCACTGGCTTTATCATTACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000411538.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CAA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTGAGCCAGGTATTCTATaGGGTCACTGGGCCGAACCT +
Preference number: 5 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFEPGIL*GHWAEP
Trigger: AGGTTCGGCCCAGTGACCCAATAGAATACCTGGCTC...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CAA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTGAGCGCCCCGGGAGGTaGCCAGATACAATACTGTAT +
Preference number: 5 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFERPGR*PDTILY
Trigger: ATACAGTATTGTATCTGGCAACCTCCCGGGGCGCTC...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS-3UTR CAA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCGTGGGCTTCCAGAGCTaGGGGACTTCACAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSVGFQS*GTSQPP
Trigger: TGGAGGCTGTGAAGTCCCCAAGCTCTGGAAGCCCAC...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTAGACTTGCTGGCTCCTaGCTTCTAGCACTCCCATTA +
Preference number: 5 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGRLAGS*LLALPL
Trigger: TAATGGGAGTGCTAGAAGCAAGGAGCCAGCAAGTCT...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTGTGTTGGGAGAAAAGTaGAGGCAGGGCTTGGAACAT +
Preference number: 5 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGVLGEK*RQGLEH
Trigger: ATGTTCCAAGCCCTGCCTCAACTTTTCTCCCAACAC...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTGTGGGCTTCCAGAGCTaGGGGACTTCACAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSVGFQS*GTSQPP
Trigger: TGGAGGCTGTGAAGTCCCCAAGCTCTGGAAGCCCAC...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTAGACTTGCTGGCTCCTaGCTTCTAGCACTCCCATTA +
Preference number: 5 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFRLAGS*LLALPL
Trigger: TAATGGGAGTGCTAGAAGCAAGGAGCCAGCAAGTCT...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTCAGAAAGAATGGTGGTaGCCAGGGGCTGGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSQKEWW*PGAGER
Trigger: TCTCTCCCCAGCCCCTGGCAACCACCATTCTTTCTG...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCCAGAAAGAATGGTGGTaGCCAGGGGCTGGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSQKEWW*PGAGER
Trigger: TCTCTCCCCAGCCCCTGGCAACCACCATTCTTTCTG...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTGAGCCAGGTATTCTATaGGGTCACTGGGCCGAACCT +
Preference number: 5 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSEPGIL*GHWAEP
Trigger: AGGTTCGGCCCAGTGACCCAATAGAATACCTGGCTC...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CAA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCGAGCCAGGTATTCTATaGGGTCACTGGGCCGAACCT +
Preference number: 5 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSEPGIL*GHWAEP
Trigger: AGGTTCGGCCCAGTGACCCAATAGAATACCTGGCTC...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CAA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTGAGGAAAGCTTAGTGTaGGGAGAAAAGTTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFEESLV*GEKLRQ
Trigger: CTGCCTCAACTTTTCTCCCAACACTAAGCTTTCCTC...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTCAAGATGAAAGAGTTTaGCAGCCGGATGGTGATGAT +
Preference number: 5 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGQDERV*QPDGDD
Trigger: ATCATCACCATCCGGCTGCAAAACTCTTTCATCTTG...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTCTGTTTAGTTCCACATaGCTGGGGAGGTCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFLFSST*LGRSQN
Trigger: ATTCTGAGACCTCCCCAGCAATGTGGAACTAAACAG...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372197.5
CDS TCA 90 bp AAGTTCTGGTCAATCTGGCCAGCAGACTCTGAAGGAGGAACCTGTTaGGGCATTCCTGGAATCAGACTGGAAGTACCTGGCAGGAATTCC +
Preference number: 5 (lower is better)
Translates to: KFWSIWPADSEGGTC*GIPGIRLEVPGRNS
Trigger: GGAATTCCTGCCAGGTACTTCCAGTCTGATTCCAGGAATGCCTCAACAGGTTCCTCCTTCAGAGTCTGCTGGCCAGATTGACCAGAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CAA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCACACAGTTCCTGGACTaGCACTCAGTAGGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSTQFLD*HSVGKV
Trigger: CACCTTGCCTACTGAGTGCAAGTCCAGGAACTGTGT...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256039.3
CDS-3UTR CAA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTGTCATTTCCATTTCCTaGAGGCTACTGTCATATTCC +
Preference number: 5 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGVISIS*RLLSYS
Trigger: GGAATATGACAGTAGCCTCAAGGAAATGGAAATGAC...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTTCTTTTCTCTTTCCTTaGACTCGGCTGGACTTTGTA +
Preference number: 5 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGSFLFP*TRLDFV
Trigger: TACAAAGTCCAGCCGAGTCAAAGGAAAGAGAAAAGA...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTGAGCGCCCCGGGAGGTaGCCAGATACAATACTGTAT +
Preference number: 5 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSERPGR*PDTILY
Trigger: ATACAGTATTGTATCTGGCAACCTCCCGGGGCGCTC...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372197.5
ENST00000372199.5
CDS-3UTR CAA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTGTCATTTCCATTTCCTaGAGGCTACTGTCATATTCC +
Preference number: 5 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFVISIS*RLLSYS
Trigger: GGAATATGACAGTAGCCTCAAGGAAATGGAAATGAC...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CAA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTTTTCACAGTTCTGTaGAATCTGATACTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGLFTVL*NLILFL
Trigger: CAGGAAGAGTATCAGATTCAACAGAACTGTGAAAAG...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp TCTCTTTCCTTTGACTCGGCTGGACTTTGTAGCCCCCATGGCCGGGTGTTGGGTATTTCTTGTGGCATTTaGAAGTTCTGGTCAATCTGG +
Preference number: 5 (lower is better)
Translates to: SLSFDSAGLCSPHGRVLGISCGI*KFWSIW
Trigger: CCAGATTGACCAGAACTTCAAAATGCCACAAGAAAT...ACCCAACACCCGGCCATGGGGGCTACAAAGTCCAGCCGAGTCAAAGGAAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCTTTTCTCTTTCCTTaGACTCGGCTGGACTTTGTA +
Preference number: 5 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFSFLFP*TRLDFV
Trigger: TACAAAGTCCAGCCGAGTCAAAGGAAAGAGAAAAGA...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCAGACTTGCTGGCTCCTaGCTTCTAGCACTCCCATTA +
Preference number: 5 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSRLAGS*LLALPL
Trigger: TAATGGGAGTGCTAGAAGCAAGGAGCCAGCAAGTCT...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCGTGTTGGGAGAAAAGTaGAGGCAGGGCTTGGAACAT +
Preference number: 5 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSVLGEK*RQGLEH
Trigger: ATGTTCCAAGCCCTGCCTCAACTTTTCTCCCAACAC...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTCTCCTTAGTTCCACATaGCTGGGGAGGTCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSLLSST*LGRSQN
Trigger: ATTCTGAGACCTCCCCAGCAATGTGGAACTAAGGAG...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372199.5
CDS-3UTR CAA 90 bp CTTTGTAGCCCCCATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTATTTCTTGTGGCATTTaGAAGTTCTGGTCAATCTGG +
Preference number: 5 (lower is better)
Translates to: LCSPHGRVLGLITPTDVFISCGI*KFWSIW
Trigger: CCAGATTGACCAGAACTTCAAAATGCCACAAGAAAT...AAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATGGGGGCTACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CAA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTAGACTTGCTGGCTCCTaGCTTCTAGCACTCCCATTA +
Preference number: 5 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSRLAGS*LLALPL
Trigger: TAATGGGAGTGCTAGAAGCAAGGAGCCAGCAAGTCT...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTGTGTTGGGAGAAAAGTaGAGGCAGGGCTTGGAACAT +
Preference number: 5 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSVLGEK*RQGLEH
Trigger: ATGTTCCAAGCCCTGCCTCAACTTTTCTCCCAACAC...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCGAGGAAAGCTTAGTGTaGGGAGAAAAGTTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSEESLV*GEKLRQ
Trigger: CTGCCTCAACTTTTCTCCCAACACTAAGCTTTCCTC...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTGAGGAAAGCTTAGTGTaGGGAGAAAAGTTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSEESLV*GEKLRQ
Trigger: CTGCCTCAACTTTTCTCCCAACACTAAGCTTTCCTC...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS TCA 90 bp TTCTTGTGGCATTTTGAAGTTCTGGTCAATCTGGCCAGCAGACTCTaGAGGAGGAACCTGTTGAGGCATTCCTGGAATCAGACTGGAAGT +
Preference number: 5 (lower is better)
Translates to: FLWHFEVLVNLASRL*RRNLLRHSWNQTGS
Trigger: ACTTCCAGTCTGATTCCAGGAATGCCTCAACAGGTTCCTCCTTCAGAGTCTGCTGGCCAGATTGACCAGAACTTCAAAATGCCACAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CAA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTCAAGATGAAAGAGTTTaGCAGCCGGATGGTGATGAT +
Preference number: 5 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSQDERV*QPDGDD
Trigger: ATCATCACCATCCGGCTGCAAAACTCTTTCATCTTG...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCCAAGATGAAAGAGTTTaGCAGCCGGATGGTGATGAT +
Preference number: 5 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSQDERV*QPDGDD
Trigger: ATCATCACCATCCGGCTGCAAAACTCTTTCATCTTG...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCGTCATTTCCATTTCCTaGAGGCTACTGTCATATTCC +
Preference number: 5 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSVISIS*RLLSYS
Trigger: GGAATATGACAGTAGCCTCAAGGAAATGGAAATGAC...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CAA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTGTCATTTCCATTTCCTaGAGGCTACTGTCATATTCC +
Preference number: 5 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSVISIS*RLLSYS
Trigger: GGAATATGACAGTAGCCTCAAGGAAATGGAAATGAC...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CAA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCTCTTTTCTCTTTCCTTaGACTCGGCTGGACTTTGTA +
Preference number: 5 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSSFLFP*TRLDFV
Trigger: TACAAAGTCCAGCCGAGTCAAAGGAAAGAGAAAAGA...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTCAAGATGAAAGAGTTTaGCAGCCGGATGGTGATGAT +
Preference number: 5 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSQDERV*QPDGDD
Trigger: ATCATCACCATCCGGCTGCAAAACTCTTTCATCTTG...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCCTTTTCACAGTTCTGTaGAATCTGATACTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSLFTVL*NLILFL
Trigger: CAGGAAGAGTATCAGATTCAACAGAACTGTGAAAAG...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CAA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTCTTTTCACAGTTCTGTaGAATCTGATACTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSLFTVL*NLILFL
Trigger: CAGGAAGAGTATCAGATTCAACAGAACTGTGAAAAG...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CAA 90 bp CATGGCCGGGTGTTGGGTCTGATCACCCCAACAGATGTGTTTTCATTGTGTAGTATTTCTTGTGGCATTTaGAAGTTCTGGTCAATCTGG +
Preference number: 5 (lower is better)
Translates to: HGRVLGLITPTDVFSLCSISCGI*KFWSIW
Trigger: CCAGATTGACCAGAACTTCAAAATGCCACAAGAAAT...ACTACACAATGAAAACACATCTGTTGGGGTGATCAGACCCAACACCCGGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CAA 90 bp GGCTGGAGAGTCCCTGAACTTGCCTTTTACAGCCCCTTAAATCTTGGTTCTAGCATTTCTTGTGGCATTTaGAAGTTCTGGTCAATCTGG +
Preference number: 5 (lower is better)
Translates to: GWRVPELAFYSPLNLGSSISCGI*KFWSIW
Trigger: CCAGATTGACCAGAACTTCAAAATGCCACAAGAAAT...GCTAGAACCAAGATTTAAGGGGCTGTAAAAGGCAAGTTCAGGGACTCTCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS-3UTR CAA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTTCTTTTCTCTTTCCTTaGACTCGGCTGGACTTTGTA +
Preference number: 5 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSSFLFP*TRLDFV
Trigger: TACAAAGTCCAGCCGAGTCAAAGGAAAGAGAAAAGA...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTCTTTTCACAGTTCTGTaGAATCTGATACTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSLFTVL*NLILFL
Trigger: CAGGAAGAGTATCAGATTCAACAGAACTGTGAAAAG...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS-3UTR CAA 90 bp CATACTAGCATTGGCCCCCTGGTCCCACTTTCTCTCTTGACTTGTCTTTTCTCTTCTTGGCTTCTAGCTTaGAGAGAAGTAAATCAGAAG +
Preference number: 5 (lower is better)
Translates to: HTSIGPLVPLSLLTCLFSSWLLA*REVNQK
Trigger: CTTCTGATTTACTTCTCTCAAAGCTAGAAGCCAAGA...AGAGAAAAGACAAGTCAAGAGAGAAAGTGGGACCAGGGGGCCAATGCTAGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000616870.4
CDS GCA 90 bp AATATATCTTCAAAAGCACCTTGGGGCCTGTTTAACTCAAGGTCTTaGAGAAGTGGCAAGAGTTCGCCCAGTGGATCCGATAGAATATTT +
Preference number: 5 (lower is better)
Translates to: NISSKAPWGLFNSRS*RSGKSSPSGSDRIF
Trigger: AAATATTCTATCGGATCCACTGGGCGAACTCTTGCCACTTCTGCAAGACCTTGAGTTAAACAGGCCCCAAGGTGCTTTTGAAGATATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372199.5
CDS CCA 90 bp TTTTTAGGAGTTAGAAATGGAGTCAATATATCTTCAAAAGCACCTTaGGGCCTGTTTAACTCAAGGTCTTGCAGAAGTGGCAAGAGTTCG +
Preference number: 5 (lower is better)
Translates to: FLGVRNGVNISSKAP*GLFNSRSCRSGKSS
Trigger: CGAACTCTTGCCACTTCTGCAAGACCTTGAGTTAAACAGGCCCCAAGGTGCTTTTGAAGATATATTGACTCCATTTCTAACTCCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372199.5
CDS CCA 72 bp CACCCCTGCCCGGGTGCCCCCGCCCAGTTGGCTGGCTaGCTGGCTAGCTGTCTCCCAGGTGTGGGTAAGGAA +
Preference number: 6 (lower is better)
Translates to: HPCPGAPAQLAG*LASCLPGVGKE
Trigger: TTCCTTACCCACACCTGGGAGACAGCTAGCCAGCCAGCCAGCCAACTGGGCGGGGGCACCCGGGCAGGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS CAA 72 bp TCCATCCTGGCAGCCTATCCGCGCGCCCCTTCCGCTTaGCGGCGCCTACACTGGCTCCTGAGGCGCGAGCTC +
Preference number: 6 (lower is better)
Translates to: SILAAYPRAPSA*RRLHWLLRREL
Trigger: GAGCTCGCGCCTCAGGAGCCAGTGTAGGCGCCGCAAAGCGGAAGGGGCGCGCGGATAGGCTGCCAGGATGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616870.4
CDS CCA 72 bp CCTGCCCGGGTGCCCCCGCCCAGTTGGCTGGCTGGCTaGCTAGCTGTCTCCCAGGTGTGGGTAAGGAATCTC +
Preference number: 6 (lower is better)
Translates to: PARVPPPSWLAG*LAVSQVWVRNL
Trigger: GAGATTCCTTACCCACACCTGGGAGACAGCTAGCCAGCCAGCCAGCCAACTGGGCGGGGGCACCCGGGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS CCA 72 bp TCTTTGTTTACTGTATACCGCCCACGCTTGGCACACTaGGAGCTCTATCCGCGCGCCCCTTCCGCTTTGCGG +
Preference number: 6 (lower is better)
Translates to: SLFTVYRPRLAH*ELYPRAPSALR
Trigger: CCGCAAAGCGGAAGGGGCGCGCGGATAGAGCTCCCAGTGTGCCAAGCGTGGGCGGTATACAGTAAACAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256039.3
CDS CCA 72 bp AGGGGTTGTCTTTGTTTACTGTATACCGCCCACGCTTaGCACACTGGGAGCTCTATCCGCGCGCCCCTTCCG +
Preference number: 6 (lower is better)
Translates to: RGCLCLLYTAHA*HTGSSIRAPLP
Trigger: CGGAAGGGGCGCGCGGATAGAGCTCCCAGTGTGCCAAGCGTGGGCGGTATACAGTAAACAAAGACAACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256039.3
CDS TCA 72 bp GAGACCCTTCCAGACTCCCGGGTGGGAAAACCACACTaGGCGCCCCGGGAGGTTGCCAGATACAATACTGTA +
Preference number: 6 (lower is better)
Translates to: ETLPDSRVGKPH*APREVARYNTV
Trigger: TACAGTATTGTATCTGGCAACCTCCCGGGGCGCTCAGTGTGGTTTTCCCACCCGGGAGTCTGGAAGGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS CCA 72 bp GATAAAGCCAGTGAGCCAGGTATTCTATTGGGTCACTaGGCCGAACCTTCGCCACCTCTGCCAGTGCCTGGG +
Preference number: 6 (lower is better)
Translates to: DKASEPGILLGH*AEPSPPLPVPG
Trigger: CCCAGGCACTGGCAGAGGTGGCGAAGGTTCGGCCCAGTGACCCAATAGAATACCTGGCTCACTGGCTTTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000411538.5
ENST00000444807.6
ENST00000616870.4
CDS CCA 72 bp AGTTGGCTGGCTGGCTGGCTAGCTGTCTCCCAGGTGTaGGTAAGGAATCTCCTTCCATCTCTGTGGCACCTT +
Preference number: 6 (lower is better)
Translates to: SWLAGWLAVSQV*VRNLLPSLWHL
Trigger: AAGGTGCCACAGAGATGGAAGGAGATTCCTTACCCACACCTGGGAGACAGCTAGCCAGCCAGCCAGCCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372197.5
ENST00000372199.5
ENST00000444807.6
CDS CCA 72 bp CTTCACGCTGGAGGCAGCTGTTTAGTTCCACATTGCTaGGGAGGTCTCAGAATCATGGTGGGAGGCGAAAGG +
Preference number: 6 (lower is better)
Translates to: LHAGGSCLVPHC*GGLRIMVGGER
Trigger: CCTTTCGCCTCCCACCATGATTCTGAGACCTCCCCAGCAATGTGGAACTAAACAGCTGCCTCCAGCGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372197.5
CDS GCA 72 bp CCTGGAATCAGACTGGAAGTACCTGGCAGGAATTCCTaGTTCAAGGCCTCCTTCTCAAGGGGGTTTGTGTCC +
Preference number: 6 (lower is better)
Translates to: PGIRLEVPGRNS*FKASFSRGFVS
Trigger: GGACACAAACCCCCTTGAGAAGGAGGCCTTGAAGCAGGAATTCCTGCCAGGTACTTCCAGTCTGATTCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS GCA 72 bp CTTCTTCACGCTGGAGGCAGCTGTTTAGTTCCACATTaGTGGGGAGGTCTCAGAATCATGGTGGGAGGCGAA +
Preference number: 6 (lower is better)
Translates to: LLHAGGSCLVPH*WGGLRIMVGGE
Trigger: TTCGCCTCCCACCATGATTCTGAGACCTCCCCAGCAATGTGGAACTAAACAGCTGCCTCCAGCGTGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372197.5
CDS CCA 72 bp CCTGTAATGATAAAGCCAGTGAGCCAGGTATTCTATTaGGTCACTGGGCCGAACCTTCGCCACCTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: PVMIKPVSQVFY*VTGPNLRHLCQ
Trigger: CTGGCAGAGGTGGCGAAGGTTCGGCCCAGTGACCCAATAGAATACCTGGCTCACTGGCTTTATCATTACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000411538.5
ENST00000444807.6
ENST00000616870.4
CDS CCA 72 bp CAGTTCCACATTGCTGGGGAGGTCTCAGAATCATGGTaGGAGGCGAAAGGCACTTCTTACATGGTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: QFHIAGEVSESW*EAKGTSYMVAA
Trigger: TGCTGCCACCATGTAAGAAGTGCCTTTCGCCTCCCACCATGATTCTGAGACCTCCCCAGCAATGTGGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372198.5
CDS TCA 72 bp TCAATCTGGCCAGCAGACTCTGAAGGAGGAACCTGTTaGGGCATTCCTGGAATCAGACTGGAAGTACCTGGC +
Preference number: 6 (lower is better)
Translates to: SIWPADSEGGTC*GIPGIRLEVPG
Trigger: GCCAGGTACTTCCAGTCTGATTCCAGGAATGCCTCAACAGGTTCCTCCTTCAGAGTCTGCTGGCCAGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS CAA 72 bp TCCTGTAATGATAAAGCCAGTGAGCCAGGTATTCTATaGGGTCACTGGGCCGAACCTTCGCCACCTCTGCCA +
Preference number: 6 (lower is better)
Translates to: SCNDKASEPGIL*GHWAEPSPPLP
Trigger: TGGCAGAGGTGGCGAAGGTTCGGCCCAGTGACCCAATAGAATACCTGGCTCACTGGCTTTATCATTACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000411538.5
ENST00000444807.6
ENST00000616870.4
CDS TCA 72 bp GGAGAGGCTATTTTTCAGTGTTTCCCAGAGCTCCTCTaGGGGTCTGCTTACACAGTTCCTGGACTTGCACTC +
Preference number: 6 (lower is better)
Translates to: GEAIFQCFPELL*GSAYTVPGLAL
Trigger: GAGTGCAAGTCCAGGAACTGTGTAAGCAGACCCTCAGAGGAGCTCTGGGAAACACTGAAAAATAGCCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256039.3
CDS GCA 72 bp TCAAAAGCACCTTGGGGCCTGTTTAACTCAAGGTCTTaGAGAAGTGGCAAGAGTTCGCCCAGTGGATCCGAT +
Preference number: 6 (lower is better)
Translates to: SKAPWGLFNSRS*RSGKSSPSGSD
Trigger: ATCGGATCCACTGGGCGAACTCTTGCCACTTCTGCAAGACCTTGAGTTAAACAGGCCCCAAGGTGCTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372199.5
CDS CCA 72 bp AAGGAGGAACCTGTTGAGGCATTCCTGGAATCAGACTaGAAGTACCTGGCAGGAATTCCTGCTTCAAGGCCT +
Preference number: 6 (lower is better)
Translates to: KEEPVEAFLESD*KYLAGIPASRP
Trigger: AGGCCTTGAAGCAGGAATTCCTGCCAGGTACTTCCAGTCTGATTCCAGGAATGCCTCAACAGGTTCCTCCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS CAA 90 bp GTTTCCCAGAGCTCCTCTGAGGGTCTGCTTACACAGTTCCTGGACTaGCACTCAGTAGGCAAGGTGATAAGAATAGGGGTTGTCTTTGTT +
Preference number: 6 (lower is better)
Translates to: VSQSSSEGLLTQFLD*HSVGKVIRIGVVFV
Trigger: AACAAAGACAACCCCTATTCTTATCACCTTGCCTACTGAGTGCAAGTCCAGGAACTGTGTAAGCAGACCCTCAGAGGAGCTCTGGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256039.3
CDS TCA 72 bp CATTTTGAAGTTCTGGTCAATCTGGCCAGCAGACTCTaGAGGAGGAACCTGTTGAGGCATTCCTGGAATCAG +
Preference number: 6 (lower is better)
Translates to: HFEVLVNLASRL*RRNLLRHSWNQ
Trigger: CTGATTCCAGGAATGCCTCAACAGGTTCCTCCTTCAGAGTCTGCTGGCCAGATTGACCAGAACTTCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000444807.6
ENST00000616870.4
CDS CAA 72 bp AGAAGTCAGTTCCTTGTGACACTTTTCACAGTTCTGTaGAATCTGATACTCTTCCTGTTTCAGCATTTCTGT +
Preference number: 6 (lower is better)
Translates to: RSQFLVTLFTVL*NLILFLFQHFC
Trigger: ACAGAAATGCTGAAACAGGAAGAGTATCAGATTCAACAGAACTGTGAAAAGTGTCACAAGGAACTGACTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000411538.5
ENST00000444807.6
ENST00000616870.4
CDS CAA 90 bp AACAGTTTCAGAAGTCAGTTCCTTGTGACACTTTTCACAGTTCTGTaGAATCTGATACTCTTCCTGTTTCAGCATTTCTGTCATTTCCAT +
Preference number: 6 (lower is better)
Translates to: NSFRSQFLVTLFTVL*NLILFLFQHFCHFH
Trigger: ATGGAAATGACAGAAATGCTGAAACAGGAAGAGTATCAGATTCAACAGAACTGTGAAAAGTGTCACAAGGAACTGACTTCTGAAACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256039.3
ENST00000372197.5
ENST00000372198.5
ENST00000372199.5
ENST00000411538.5
ENST00000444807.6
ENST00000616870.4