Pregenerated sensors for DYDC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000170788Ensembl transcript IDs: ENST00000372202.6, ENST00000372204.7, ENST00000421924.6, ENST00000453477.1, ENST00000454362.5
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTCCAGCCCACACCTGGGAGACAGCTAGCCAGCCAGCCAGCCAACTaGGCGGGGGCACCCGGGCAGGGGTGCCAGATACAGTATTGTATC | + |
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Preference number: 5 (lower is better) Translates to: LQPTPGRQLASQPAN*AGAPGQGCQIQYCI Trigger: GATACAATACTGTATCTGGCACCCCTGCCCGGGTGCCCCCGCCCAGTTGGCTGGCTGGCTGGCTAGCTGTCTCCCAGGTGTGGGCTGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000453477.1 |
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| CDS CCA 90 bp | CTAACTCCCACACCTGGGAGACAGCTAGCCAGCCAGCCAGCCAACTaGGCGGGGGCACCCGGGCAGGGGTGCCAGATACAGTATTGTATC | + |
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Preference number: 5 (lower is better) Translates to: LTPTPGRQLASQPAN*AGAPGQGCQIQYCI Trigger: GATACAATACTGTATCTGGCACCCCTGCCCGGGTGCCCCCGCCCAGTTGGCTGGCTGGCTGGCTAGCTGTCTCCCAGGTGTGGGAGTTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454362.5 |
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| CDS TCA 90 bp | GCTGCAATGCCAGCTGTTGCTGCTGAAGTAAGAGCTCCTCTGCTTTaGGCCTCTCCATCATTTCCTGCTCCATCAGAGCTAATTCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: AAMPAVAAEVRAPLL*ASPSFPAPSELILF Trigger: AAAGAGAATTAGCTCTGATGGAGCAGGAAATGATGGAGAGGCTCAAAGCAGAGGAGCTCTTACTTCAGCAGCAACAGCTGGCATTGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000372202.6 ENST00000372204.7 ENST00000421924.6 ENST00000454362.5 |
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| CDS CCA 72 bp | CCGGGGCGCTCAGTGTGGTTTTCCCACCCGGGAGTCTaGAAGGGTCTCCCGCAGCCCGCAGGAGACGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: PGRSVWFSHPGV*KGLPQPAGDAA Trigger: CGCTGCGTCTCCTGCGGGCTGCGGGAGACCCTTCCAGACTCCCGGGTGGGAAAACCACACTGAGCGCCCCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000453477.1 ENST00000454362.5 |
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| CDS GCA 72 bp | CAGCCAGCCAACTGGGCGGGGGCACCCGGGCAGGGGTaGCAGATACAGTATTGTATCTGGCAACCTCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: QPANWAGAPGQG*QIQYCIWQPPG Trigger: CCCGGGAGGTTGCCAGATACAATACTGTATCTGGCACCCCTGCCCGGGTGCCCCCGCCCAGTTGGCTGGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000453477.1 ENST00000454362.5 |
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| CDS TCA 72 bp | CCAGCTGTTGCTGCTGAAGTAAGAGCTCCTCTGCTTTaGGCCTCTCCATCATTTCCTGCTCCATCAGAGCTA | + |
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Preference number: 6 (lower is better) Translates to: PAVAAEVRAPLL*ASPSFPAPSEL Trigger: TAGCTCTGATGGAGCAGGAAATGATGGAGAGGCTCAAAGCAGAGGAGCTCTTACTTCAGCAGCAACAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000372202.6 ENST00000372204.7 ENST00000421924.6 ENST00000454362.5 |
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| CDS CAA 90 bp | CAAGACCTTGAGTTAAACAGGCCCCAAGGTGCTTTTGAAGATATATaGACTCCATTTCTAACTCCCACACCTGGGAGACAGCTAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: QDLELNRPQGAFEDI*TPFLTPTPGRQLAS Trigger: GCTGGCTAGCTGTCTCCCAGGTGTGGGAGTTAGAAATGGAGTCAATATATCTTCAAAAGCACCTTGGGGCCTGTTTAACTCAAGGTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454362.5 |
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| CDS CAA 90 bp | AAATCCACAATGCTAAATATTCTATCGGATCCACTGGGCGAACTCTaGCCACTTCTGCAAGACCTTGAGTTAAACAGGCCCCAAGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: KSTMLNILSDPLGEL*PLLQDLELNRPQGA Trigger: AGCACCTTGGGGCCTGTTTAACTCAAGGTCTTGCAGAAGTGGCAAGAGTTCGCCCAGTGGATCCGATAGAATATTTAGCATTGTGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000372202.6 ENST00000372204.7 ENST00000421924.6 ENST00000453477.1 ENST00000454362.5 |
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| CDS CAA 72 bp | ATGCTAAATATTCTATCGGATCCACTGGGCGAACTCTaGCCACTTCTGCAAGACCTTGAGTTAAACAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: MLNILSDPLGEL*PLLQDLELNRP Trigger: GGGCCTGTTTAACTCAAGGTCTTGCAGAAGTGGCAAGAGTTCGCCCAGTGGATCCGATAGAATATTTAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000372202.6 ENST00000372204.7 ENST00000421924.6 ENST00000453477.1 ENST00000454362.5 |
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| CDS CAA 72 bp | GAGTTAAACAGGCCCCAAGGTGCTTTTGAAGATATATaGACTCCATTTCTAACTCCCACACCTGGGAGACAG | + |
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Preference number: 6 (lower is better) Translates to: ELNRPQGAFEDI*TPFLTPTPGRQ Trigger: CTGTCTCCCAGGTGTGGGAGTTAGAAATGGAGTCAATATATCTTCAAAAGCACCTTGGGGCCTGTTTAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454362.5 |
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| CDS CAA 90 bp | CAAGACCTTGAGTTAAACAGGCCCCAAGGTGCTTTTGAAGATATATaGACTCCATTTCTAACTCCTGTAATCCCAGCTACTTGGAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: QDLELNRPQGAFEDI*TPFLTPVIPATWKA Trigger: AGCCTTCCAAGTAGCTGGGATTACAGGAGTTAGAAATGGAGTCAATATATCTTCAAAAGCACCTTGGGGCCTGTTTAACTCAAGGTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372204.7 ENST00000453477.1 |
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