Pregenerated sensors for DUT (Homo sapiens)
Ensembl gene IDs: ENSG00000128951Ensembl transcript IDs: ENST00000331200.8, ENST00000455976.6, ENST00000558367.1, ENST00000558472.5, ENST00000558813.5, ENST00000558978.5, ENST00000559416.5, ENST00000559540.5, ENST00000559935.5
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGAAGCACTCCATGTGTATAACCCACATCCTCAAAACGATGCCTaGTGTCTCACAGAATCTGATGGACAAAACCTAAGTGACACCCAA | + |
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Preference number: 1 (lower is better) Translates to: PEALHVYNPHPQNDA*CLTESDGQNLSDTQ Trigger: TTGGGTGTCACTTAGGTTTTGTCCATCAGATTCTGTGAGACACCAGGCATCGTTTTGAGGATGTGGGTTATACACATGGAGTGCTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR CCA 90 bp | AATCACCAGAAAAGAACACTCTTGCCTGTGCTTCCACAAACTGGGTaGTCAAGTGGGCTGATAGTTCCAGAAGCACTCCATGTGTATAAC | + |
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Preference number: 1 (lower is better) Translates to: NHQKRTLLPVLPQTG*SSGLIVPEALHVYN Trigger: GTTATACACATGGAGTGCTTCTGGAACTATCAGCCCACTTGACCACCCAGTTTGTGGAAGCACAGGCAAGAGTGTTCTTTTCTGGTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR TCA 90 bp | TGGCTATGTCCCACTGAGTTGATTTCATGGCTCACTAATGAAATGTaGGCCACAGAGGGACAATTACATTGCAGGGTATTAAATGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: WLCPTELISWLTNEM*ATEGQLHCRVLNGL Trigger: CAGGCCATTTAATACCCTGCAATGTAATTGTCCCTCTGTGGCTCACATTTCATTAGTGAGCCATGAAATCAACTCAGTGGGACATAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR TCA 90 bp | CACAGAATCAGTCCCATATCTGCAATGAAATGCTGCTTATGTATGTaGGACAGAAAAACCTGGTGGCTGAAGTATTATTTCATTTATCTT | + |
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Preference number: 1 (lower is better) Translates to: HRISPISAMKCCLCM*DRKTWWLKYYFIYL Trigger: AAGATAAATGAAATAATACTTCAGCCACCAGGTTTTTCTGTCTCACATACATAAGCAGCATTTCATTGCAGATATGGGACTGATTCTGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR CAA 90 bp | TGCAGGGTATTAAATGGCCTGGAGAATCACCAGAAAAGAACACTCTaGCCTGTGCTTCCACAAACTGGGTGGTCAAGTGGGCTGATAGTT | + |
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Preference number: 2 (lower is better) Translates to: CRVLNGLENHQKRTL*PVLPQTGWSSGLIV Trigger: AACTATCAGCCCACTTGACCACCCAGTTTGTGGAAGCACAGGCAAGAGTGTTCTTTTCTGGTGATTCTCCAGGCCATTTAATACCCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR-3UTR CCA 90 bp | GGTATGCAAAAATGCTGGCTATGTCCCACTGAGTTGATTTCATGGCTCACTAATAACTGGGTGGTCAAGTaGGCTGATAGTTCCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: GMQKCWLCPTELISWLTNNWVVK*ADSSRS Trigger: GCTTCTGGAACTATCAGCCCACTTGACCACCCAGTT...ATTAGTGAGCCATGAAATCAACTCAGTGGGACATAGCCAGCATTTTTGCATACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR-3UTR CCA 90 bp | GGTATGCAAAAATGCTGGCTATGTCCCACTGAGTTGATTTCATGGCTCACTAATCTTCCACAAACTGGGTaGTCAAGTGGGCTGATAGTT | + |
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Preference number: 2 (lower is better) Translates to: GMQKCWLCPTELISWLTNLPQTG*SSGLIV Trigger: AACTATCAGCCCACTTGACCACCCAGTTTGTGGAAG...ATTAGTGAGCCATGAAATCAACTCAGTGGGACATAGCCAGCATTTTTGCATACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR-3UTR TCA 90 bp | AGTGGGCTGATAGTTCCAGAAGCACTCCATGTGTATAACCCACATCCTCAAAACATTTGCCTGATGAGATaGAATTCAAGGGAACAAACC | + |
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Preference number: 2 (lower is better) Translates to: SGLIVPEALHVYNPHPQNICLMR*NSREQT Trigger: GGTTTGTTCCCTTGAATTTCATCTCATCAGGCAAAT...GTTTTGAGGATGTGGGTTATACACATGGAGTGCTTCTGGAACTATCAGCCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR-3UTR TCA 90 bp | GGTATGCAAAAATGCTGGCTATGTCCCACTGAGTTGATTTCATGGCTCACTAATTGCTGCTTATGTATGTaGGACAGAAAAACCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: GMQKCWLCPTELISWLTNCCLCM*DRKTWW Trigger: CCACCAGGTTTTTCTGTCTCACATACATAAGCAGCA...ATTAGTGAGCCATGAAATCAACTCAGTGGGACATAGCCAGCATTTTTGCATACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR-3UTR TCA 90 bp | CTCACAGAATCTGATGGACAAAACCTAAGTGACACCCAAAACCCTGATACAAAGCTATTGCTACTTCACTaGGGGAAAACTCGTAACTAC | + |
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Preference number: 2 (lower is better) Translates to: LTESDGQNLSDTQNPDTKLLLLH*GKTRNY Trigger: GTAGTTACGAGTTTTCCCTCAGTGAAGTAGCAATAG...CTTTGTATCAGGGTTTTGGGTGTCACTTAGGTTTTGTCCATCAGATTCTGTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR-3UTR GCA 90 bp | AGTGGGCTGATAGTTCCAGAAGCACTCCATGTGTATAACCCACATCCTCAAAACAATCAGTCCCATATCTaGAATGAAATGCTGCTTATG | + |
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Preference number: 2 (lower is better) Translates to: SGLIVPEALHVYNPHPQNNQSHI*NEMLLM Trigger: CATAAGCAGCATTTCATTGCAGATATGGGACTGATT...GTTTTGAGGATGTGGGTTATACACATGGAGTGCTTCTGGAACTATCAGCCCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR-3UTR TCA 90 bp | CTCACAGAATCTGATGGACAAAACCTAAGTGACACCCAAAACCCTGATACAAAGGTCCCATATCTGCAATaGAATGCTGCTTATGTATGT | + |
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Preference number: 2 (lower is better) Translates to: LTESDGQNLSDTQNPDTKVPYLQ*NAAYVC Trigger: ACATACATAAGCAGCATTTCATTGCAGATATGGGAC...CTTTGTATCAGGGTTTTGGGTGTCACTTAGGTTTTGTCCATCAGATTCTGTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR-3UTR TCA 90 bp | CATATCTGCAATGAAATGCTGCTTATGTATGTGAGACAGAAAAACCTGGTGGCTATTTGCCTGATGAGATaGAATTCAAGGGAACAAACC | + |
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Preference number: 2 (lower is better) Translates to: HICNEMLLMYVRQKNLVAICLMR*NSREQT Trigger: GGTTTGTTCCCTTGAATTTCATCTCATCAGGCAAAT...AGCCACCAGGTTTTTCTGTCTCACATACATAAGCAGCATTTCATTGCAGATATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR-3UTR TCA 90 bp | TTCCAAAAGATGTTAATCAAGGTAAGCCACAGAATCAGTCCCATATCTGCAATGCTATTGCTACTTCACTaGGGGAAAACTCGTAACTAC | + |
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Preference number: 2 (lower is better) Translates to: FQKMLIKVSHRISPISAMLLLLH*GKTRNY Trigger: GTAGTTACGAGTTTTCCCTCAGTGAAGTAGCAATAG...CATTGCAGATATGGGACTGATTCTGTGGCTTACCTTGATTAACATCTTTTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR-3UTR CCA 90 bp | CTCACAGAATCTGATGGACAAAACCTAAGTGACACCCAAAACCCTGATACAAAGGACAGAAAAACCTGGTaGCTGAAGTATTATTTCATT | + |
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Preference number: 2 (lower is better) Translates to: LTESDGQNLSDTQNPDTKDRKTW*LKYYFI Trigger: AATGAAATAATACTTCAGCCACCAGGTTTTTCTGTC...CTTTGTATCAGGGTTTTGGGTGTCACTTAGGTTTTGTCCATCAGATTCTGTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR CCA 72 bp | CCAGAAAAGAACACTCTTGCCTGTGCTTCCACAAACTaGGTGGTCAAGTGGGCTGATAGTTCCAGAAGCACT | + |
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Preference number: 3 (lower is better) Translates to: PEKNTLACASTN*VVKWADSSRST Trigger: AGTGCTTCTGGAACTATCAGCCCACTTGACCACCCAGTTTGTGGAAGCACAGGCAAGAGTGTTCTTTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR CCA 72 bp | AAAAGAACACTCTTGCCTGTGCTTCCACAAACTGGGTaGTCAAGTGGGCTGATAGTTCCAGAAGCACTCCAT | + |
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Preference number: 3 (lower is better) Translates to: KRTLLPVLPQTG*SSGLIVPEALH Trigger: ATGGAGTGCTTCTGGAACTATCAGCCCACTTGACCACCCAGTTTGTGGAAGCACAGGCAAGAGTGTTCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR TCA 72 bp | CTGGTATGCAAAAATGCTGGCTATGTCCCACTGAGTTaGTTTCATGGCTCACTAATGAAATGTGAGCCACAG | + |
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Preference number: 3 (lower is better) Translates to: LVCKNAGYVPLS*FHGSLMKCEPQ Trigger: CTGTGGCTCACATTTCATTAGTGAGCCATGAAATCAACTCAGTGGGACATAGCCAGCATTTTTGCATACCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR TCA 72 bp | CCCACTGAGTTGATTTCATGGCTCACTAATGAAATGTaGGCCACAGAGGGACAATTACATTGCAGGGTATTA | + |
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Preference number: 3 (lower is better) Translates to: PTELISWLTNEM*ATEGQLHCRVL Trigger: TAATACCCTGCAATGTAATTGTCCCTCTGTGGCTCACATTTCATTAGTGAGCCATGAAATCAACTCAGTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| 3UTR TCA 72 bp | AGTCCCATATCTGCAATGAAATGCTGCTTATGTATGTaGGACAGAAAAACCTGGTGGCTGAAGTATTATTTC | + |
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Preference number: 3 (lower is better) Translates to: SPISAMKCCLCM*DRKTWWLKYYF Trigger: GAAATAATACTTCAGCCACCAGGTTTTTCTGTCTCACATACATAAGCAGCATTTCATTGCAGATATGGGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR TCA 90 bp | AGTGGGCTGATAGTTCCAGAAGCACTCCATGTGTATAACCCACATCCTCAAAACGAGGAGAGCGCACGATaGGCGTCGCCGCAGGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SGLIVPEALHVYNPHPQNEESAR*ASPQGA Trigger: CGCTCCCTGCGGCGACGCTCATCGTGCGCTCTCCTC...GTTTTGAGGATGTGGGTTATACACATGGAGTGCTTCTGGAACTATCAGCCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455976.6 |
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| CDS-3UTR GCA 90 bp | AGTGGGCTGATAGTTCCAGAAGCACTCCATGTGTATAACCCACATCCTCAAAACGTGGGGGCCGTGGCGTaGTCGGAGAGCCGGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SGLIVPEALHVYNPHPQNVGAVA*SESRAK Trigger: CTTTGCCCGGCTCTCCGAGCACGCCACGGCCCCCAC...GTTTTGAGGATGTGGGTTATACACATGGAGTGCTTCTGGAACTATCAGCCCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CCA 90 bp | CTCACAGAATCTGATGGACAAAACCTAAGTGACACCCAAAACCCTGATACAAAGCGGCCCCGACTGTACTaGCTCCGCGGCAGCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: LTESDGQNLSDTQNPDTKRPRLY*LRGSLG Trigger: GCCAAGGCTGCCGCGGAGCCAGTACAGTCGGGGCCG...CTTTGTATCAGGGTTTTGGGTGTCACTTAGGTTTTGTCCATCAGATTCTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000331200.8 |
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| CDS-3UTR CCA 90 bp | AGTGGGCTGATAGTTCCAGAAGCACTCCATGTGTATAACCCACATCCTCAAAACCCCCAGAGTTTGGGCTaGTTGGGTCCTCGGCACCTC | + |
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Preference number: 4 (lower is better) Translates to: SGLIVPEALHVYNPHPQNPQSLG*LGPRHL Trigger: GAGGTGCCGAGGACCCAACCAGCCCAAACTCTGGGG...GTTTTGAGGATGTGGGTTATACACATGGAGTGCTTCTGGAACTATCAGCCCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331200.8 |
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| CDS-3UTR GCA 90 bp | TTCTTGATTACAGCCTATTGCTACTTCACTGAGGGAAAACTCGTAACTACAACTGTGGGGGCCGTGGCGTaGTCGGAGAGCCGGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: FLITAYCYFTEGKLVTTTVGAVA*SESRAK Trigger: CTTTGCCCGGCTCTCCGAGCACGCCACGGCCCCCAC...AGTTGTAGTTACGAGTTTTCCCTCAGTGAAGTAGCAATAGGCTGTAATCAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CCA 90 bp | AGTGGGCTGATAGTTCCAGAAGCACTCCATGTGTATAACCCACATCCTCAAAACATTTCCCCCAGAGTTTaGGCTGGTTGGGTCCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: SGLIVPEALHVYNPHPQNISPRV*AGWVLG Trigger: GCCGAGGACCCAACCAGCCCAAACTCTGGGGGAAAT...GTTTTGAGGATGTGGGTTATACACATGGAGTGCTTCTGGAACTATCAGCCCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331200.8 |
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| CDS-3UTR GCA 90 bp | ACAGCCAGAATTCTACTCTTGCTATATCATCTTTTCAAAAGGGAGATTACAGAAGTGGGGGCCGTGGCGTaGTCGGAGAGCCGGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: TARILLLLYHLFKREITEVGAVA*SESRAK Trigger: CTTTGCCCGGCTCTCCGAGCACGCCACGGCCCCCAC...TTCTGTAATCTCCCTTTTGAAAAGATGATATAGCAAGAGTAGAATTCTGGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000559540.5 |
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| CDS-3UTR GCA 90 bp | GAAAAGAACACTCTTGCCTGTGCTTCCACAAACTGGGTGGTCAAGTGGGCTGATCCTGGTATGCAAAAATaGTGGCTATGTCCCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: EKNTLACASTNWVVKWADPGMQK*WLCPTE Trigger: CTCAGTGGGACATAGCCAGCATTTTTGCATACCAGG...ATCAGCCCACTTGACCACCCAGTTTGTGGAAGCACAGGCAAGAGTGTTCTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CCA 90 bp | GAAAAGAACACTCTTGCCTGTGCTTCCACAAACTGGGTGGTCAAGTGGGCTGATCTTCCACAAACTGGGTaGTCAAGTGGGCTGATAGTT | + |
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Preference number: 4 (lower is better) Translates to: EKNTLACASTNWVVKWADLPQTG*SSGLIV Trigger: AACTATCAGCCCACTTGACCACCCAGTTTGTGGAAG...ATCAGCCCACTTGACCACCCAGTTTGTGGAAGCACAGGCAAGAGTGTTCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CCA 90 bp | GAAAAGAACACTCTTGCCTGTGCTTCCACAAACTGGGTGGTCAAGTGGGCTGATCCTCAAAACGATGCCTaGTGTCTCACAGAATCTGAT | + |
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Preference number: 4 (lower is better) Translates to: EKNTLACASTNWVVKWADPQNDA*CLTESD Trigger: ATCAGATTCTGTGAGACACCAGGCATCGTTTTGAGG...ATCAGCCCACTTGACCACCCAGTTTGTGGAAGCACAGGCAAGAGTGTTCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CCA 90 bp | GAAAAGAACACTCTTGCCTGTGCTTCCACAAACTGGGTGGTCAAGTGGGCTGATGGTATGCAAAAATGCTaGCTATGTCCCACTGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: EKNTLACASTNWVVKWADGMQKC*LCPTEL Trigger: CAACTCAGTGGGACATAGCCAGCATTTTTGCATACC...ATCAGCCCACTTGACCACCCAGTTTGTGGAAGCACAGGCAAGAGTGTTCTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CCA 90 bp | CATGTCTTTCACAAACATACCTCTACCCAGTCAATAGAGGATTTATCAAAAGAAGCTTACTGGGTGAAATaGCGGGTGTCTCCGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: HVFHKHTSTQSIEDLSKEAYWVK*RVSPAP Trigger: CGGGGCCGGAGACACCCGCCATTTCACCCAGTAAGC...TTCTTTTGATAAATCCTCTATTGACTGGGTAGAGGTATGTTTGTGAAAGACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331200.8 |
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| CDS-3UTR CCA 90 bp | CTCACAGAATCTGATGGACAAAACCTAAGTGACACCCAAAACCCTGATACAAAGAACTGGGTGGTCAAGTaGGCTGATAGTTCCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: LTESDGQNLSDTQNPDTKNWVVK*ADSSRS Trigger: GCTTCTGGAACTATCAGCCCACTTGACCACCCAGTT...CTTTGTATCAGGGTTTTGGGTGTCACTTAGGTTTTGTCCATCAGATTCTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CCA 90 bp | CTCACAGAATCTGATGGACAAAACCTAAGTGACACCCAAAACCCTGATACAAAGTGTGCTTCCACAAACTaGGTGGTCAAGTGGGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: LTESDGQNLSDTQNPDTKCASTN*VVKWAD Trigger: ATCAGCCCACTTGACCACCCAGTTTGTGGAAGCACA...CTTTGTATCAGGGTTTTGGGTGTCACTTAGGTTTTGTCCATCAGATTCTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CCA 90 bp | GAAAAGAACACTCTTGCCTGTGCTTCCACAAACTGGGTGGTCAAGTGGGCTGATTTTTATAGCCCAACCTaGTATGCAAAAATGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: EKNTLACASTNWVVKWADFYSPT*YAKMLA Trigger: AGCCAGCATTTTTGCATACCAGGTTGGGCTATAAAA...ATCAGCCCACTTGACCACCCAGTTTGTGGAAGCACAGGCAAGAGTGTTCTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR GCA 90 bp | GAAAAGAACACTCTTGCCTGTGCTTCCACAAACTGGGTGGTCAAGTGGGCTGATTTGATTACAGCCTATTaGTACTTCACTGAGGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: EKNTLACASTNWVVKWADLITAY*YFTEGK Trigger: TTTTCCCTCAGTGAAGTAGCAATAGGCTGTAATCAA...ATCAGCCCACTTGACCACCCAGTTTGTGGAAGCACAGGCAAGAGTGTTCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR GCA 90 bp | GAAAAGAACACTCTTGCCTGTGCTTCCACAAACTGGGTGGTCAAGTGGGCTGATAATCAGTCCCATATCTaGAATGAAATGCTGCTTATG | + |
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Preference number: 4 (lower is better) Translates to: EKNTLACASTNWVVKWADNQSHI*NEMLLM Trigger: CATAAGCAGCATTTCATTGCAGATATGGGACTGATT...ATCAGCCCACTTGACCACCCAGTTTGTGGAAGCACAGGCAAGAGTGTTCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR TCA 90 bp | TTCTTGATTACAGCCTATTGCTACTTCACTGAGGGAAAACTCGTAACTACAACTCTGGCTATGTCCCACTaGGTTGATTTCATGGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: FLITAYCYFTEGKLVTTTLAMSH*VDFMAH Trigger: GTGAGCCATGAAATCAACTCAGTGGGACATAGCCAG...AGTTGTAGTTACGAGTTTTCCCTCAGTGAAGTAGCAATAGGCTGTAATCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR TCA 90 bp | TTCCAAAAGATGTTAATCAAGGTAAGCCACAGAATCAGTCCCATATCTGCAATGCTGGCTATGTCCCACTaGGTTGATTTCATGGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: FQKMLIKVSHRISPISAMLAMSH*VDFMAH Trigger: GTGAGCCATGAAATCAACTCAGTGGGACATAGCCAG...CATTGCAGATATGGGACTGATTCTGTGGCTTACCTTGATTAACATCTTTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR GCA 90 bp | GGTATGCAAAAATGCTGGCTATGTCCCACTGAGTTGATTTCATGGCTCACTAATACATCCTCAAAACGATaGCTGGTGTCTCACAGAATC | + |
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Preference number: 4 (lower is better) Translates to: GMQKCWLCPTELISWLTNTSSKR*LVSHRI Trigger: GATTCTGTGAGACACCAGGCATCGTTTTGAGGATGT...ATTAGTGAGCCATGAAATCAACTCAGTGGGACATAGCCAGCATTTTTGCATACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR GCA 90 bp | TTCCAAAAGATGTTAATCAAGGTAAGCCACAGAATCAGTCCCATATCTGCAATGGAACACTCTTGCCTGTaGTTCCACAAACTGGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: FQKMLIKVSHRISPISAMEHSCL*FHKLGG Trigger: ACCACCCAGTTTGTGGAAGCACAGGCAAGAGTGTTC...CATTGCAGATATGGGACTGATTCTGTGGCTTACCTTGATTAACATCTTTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR GCA 90 bp | TTCTTGATTACAGCCTATTGCTACTTCACTGAGGGAAAACTCGTAACTACAACTGAACACTCTTGCCTGTaGTTCCACAAACTGGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: FLITAYCYFTEGKLVTTTEHSCL*FHKLGG Trigger: ACCACCCAGTTTGTGGAAGCACAGGCAAGAGTGTTC...AGTTGTAGTTACGAGTTTTCCCTCAGTGAAGTAGCAATAGGCTGTAATCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CCA 90 bp | TTCTTGATTACAGCCTATTGCTACTTCACTGAGGGAAAACTCGTAACTACAACTTGTGCTTCCACAAACTaGGTGGTCAAGTGGGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: FLITAYCYFTEGKLVTTTCASTN*VVKWAD Trigger: ATCAGCCCACTTGACCACCCAGTTTGTGGAAGCACA...AGTTGTAGTTACGAGTTTTCCCTCAGTGAAGTAGCAATAGGCTGTAATCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR TCA 90 bp | GGTATGCAAAAATGCTGGCTATGTCCCACTGAGTTGATTTCATGGCTCACTAATCTCACTAATGAAATGTaGGCCACAGAGGGACAATTA | + |
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Preference number: 4 (lower is better) Translates to: GMQKCWLCPTELISWLTNLTNEM*ATEGQL Trigger: TAATTGTCCCTCTGTGGCTCACATTTCATTAGTGAG...ATTAGTGAGCCATGAAATCAACTCAGTGGGACATAGCCAGCATTTTTGCATACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR GCA 90 bp | GGTATGCAAAAATGCTGGCTATGTCCCACTGAGTTGATTTCATGGCTCACTAATAGAAAAGAACACTCTTaGCTGTGCTTCCACAAACTG | + |
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Preference number: 4 (lower is better) Translates to: GMQKCWLCPTELISWLTNRKEHS*LCFHKL Trigger: CAGTTTGTGGAAGCACAGGCAAGAGTGTTCTTTTCT...ATTAGTGAGCCATGAAATCAACTCAGTGGGACATAGCCAGCATTTTTGCATACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR GCA 90 bp | CTCACAGAATCTGATGGACAAAACCTAAGTGACACCCAAAACCCTGATACAAAGAGAAAAGAACACTCTTaGCTGTGCTTCCACAAACTG | + |
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Preference number: 4 (lower is better) Translates to: LTESDGQNLSDTQNPDTKRKEHS*LCFHKL Trigger: CAGTTTGTGGAAGCACAGGCAAGAGTGTTCTTTTCT...CTTTGTATCAGGGTTTTGGGTGTCACTTAGGTTTTGTCCATCAGATTCTGTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR TCA 90 bp | GGTATGCAAAAATGCTGGCTATGTCCCACTGAGTTGATTTCATGGCTCACTAATATTTGCCTGATGAGATaGAATTCAAGGGAACAAACC | + |
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Preference number: 4 (lower is better) Translates to: GMQKCWLCPTELISWLTNICLMR*NSREQT Trigger: GGTTTGTTCCCTTGAATTTCATCTCATCAGGCAAAT...ATTAGTGAGCCATGAAATCAACTCAGTGGGACATAGCCAGCATTTTTGCATACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR GCA 90 bp | TTCCAAAAGATGTTAATCAAGGTAAGCCACAGAATCAGTCCCATATCTGCAATGACATCCTCAAAACGATaGCTGGTGTCTCACAGAATC | + |
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Preference number: 4 (lower is better) Translates to: FQKMLIKVSHRISPISAMTSSKR*LVSHRI Trigger: GATTCTGTGAGACACCAGGCATCGTTTTGAGGATGT...CATTGCAGATATGGGACTGATTCTGTGGCTTACCTTGATTAACATCTTTTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CCA 90 bp | GGTATGCAAAAATGCTGGCTATGTCCCACTGAGTTGATTTCATGGCTCACTAATTTTTATAGCCCAACCTaGTATGCAAAAATGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: GMQKCWLCPTELISWLTNFYSPT*YAKMLA Trigger: AGCCAGCATTTTTGCATACCAGGTTGGGCTATAAAA...ATTAGTGAGCCATGAAATCAACTCAGTGGGACATAGCCAGCATTTTTGCATACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR TCA 90 bp | TTCTTGATTACAGCCTATTGCTACTTCACTGAGGGAAAACTCGTAACTACAACTCTATTGCTACTTCACTaGGGGAAAACTCGTAACTAC | + |
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Preference number: 4 (lower is better) Translates to: FLITAYCYFTEGKLVTTTLLLLH*GKTRNY Trigger: GTAGTTACGAGTTTTCCCTCAGTGAAGTAGCAATAG...AGTTGTAGTTACGAGTTTTCCCTCAGTGAAGTAGCAATAGGCTGTAATCAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR GCA 90 bp | GGTATGCAAAAATGCTGGCTATGTCCCACTGAGTTGATTTCATGGCTCACTAATAATCAGTCCCATATCTaGAATGAAATGCTGCTTATG | + |
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Preference number: 4 (lower is better) Translates to: GMQKCWLCPTELISWLTNNQSHI*NEMLLM Trigger: CATAAGCAGCATTTCATTGCAGATATGGGACTGATT...ATTAGTGAGCCATGAAATCAACTCAGTGGGACATAGCCAGCATTTTTGCATACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR GCA 90 bp | CATGTCTTTCACAAACATACCTCTACCCAGTCAATAGAGGATTTATCAAAAGAACCTGGTATGCAAAAATaGTGGCTATGTCCCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: HVFHKHTSTQSIEDLSKEPGMQK*WLCPTE Trigger: CTCAGTGGGACATAGCCAGCATTTTTGCATACCAGG...TTCTTTTGATAAATCCTCTATTGACTGGGTAGAGGTATGTTTGTGAAAGACATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CCA 90 bp | TTCCAAAAGATGTTAATCAAGGTAAGCCACAGAATCAGTCCCATATCTGCAATGTTGCAGGGTATTAAATaGCCTGGAGAATCACCAGAA | + |
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Preference number: 4 (lower is better) Translates to: FQKMLIKVSHRISPISAMLQGIK*PGESPE Trigger: TTCTGGTGATTCTCCAGGCCATTTAATACCCTGCAA...CATTGCAGATATGGGACTGATTCTGTGGCTTACCTTGATTAACATCTTTTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR TCA 90 bp | CATGTCTTTCACAAACATACCTCTACCCAGTCAATAGAGGATTTATCAAAAGAATGCTGCTTATGTATGTaGGACAGAAAAACCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HVFHKHTSTQSIEDLSKECCLCM*DRKTWW Trigger: CCACCAGGTTTTTCTGTCTCACATACATAAGCAGCA...TTCTTTTGATAAATCCTCTATTGACTGGGTAGAGGTATGTTTGTGAAAGACATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR TCA 90 bp | TTCTTGATTACAGCCTATTGCTACTTCACTGAGGGAAAACTCGTAACTACAACTGTCCCATATCTGCAATaGAATGCTGCTTATGTATGT | + |
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Preference number: 4 (lower is better) Translates to: FLITAYCYFTEGKLVTTTVPYLQ*NAAYVC Trigger: ACATACATAAGCAGCATTTCATTGCAGATATGGGAC...AGTTGTAGTTACGAGTTTTCCCTCAGTGAAGTAGCAATAGGCTGTAATCAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CCA 90 bp | CATGTCTTTCACAAACATACCTCTACCCAGTCAATAGAGGATTTATCAAAAGAACCTCAAAACGATGCCTaGTGTCTCACAGAATCTGAT | + |
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Preference number: 4 (lower is better) Translates to: HVFHKHTSTQSIEDLSKEPQNDA*CLTESD Trigger: ATCAGATTCTGTGAGACACCAGGCATCGTTTTGAGG...TTCTTTTGATAAATCCTCTATTGACTGGGTAGAGGTATGTTTGTGAAAGACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR TCA 90 bp | CATGTCTTTCACAAACATACCTCTACCCAGTCAATAGAGGATTTATCAAAAGAACTCACTAATGAAATGTaGGCCACAGAGGGACAATTA | + |
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Preference number: 4 (lower is better) Translates to: HVFHKHTSTQSIEDLSKELTNEM*ATEGQL Trigger: TAATTGTCCCTCTGTGGCTCACATTTCATTAGTGAG...TTCTTTTGATAAATCCTCTATTGACTGGGTAGAGGTATGTTTGTGAAAGACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR GCA 90 bp | TTCTTGATTACAGCCTATTGCTACTTCACTGAGGGAAAACTCGTAACTACAACTTTGATTACAGCCTATTaGTACTTCACTGAGGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: FLITAYCYFTEGKLVTTTLITAY*YFTEGK Trigger: TTTTCCCTCAGTGAAGTAGCAATAGGCTGTAATCAA...AGTTGTAGTTACGAGTTTTCCCTCAGTGAAGTAGCAATAGGCTGTAATCAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CCA 90 bp | CATATCTGCAATGAAATGCTGCTTATGTATGTGAGACAGAAAAACCTGGTGGCTGACAGAAAAACCTGGTaGCTGAAGTATTATTTCATT | + |
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Preference number: 4 (lower is better) Translates to: HICNEMLLMYVRQKNLVADRKTW*LKYYFI Trigger: AATGAAATAATACTTCAGCCACCAGGTTTTTCTGTC...AGCCACCAGGTTTTTCTGTCTCACATACATAAGCAGCATTTCATTGCAGATATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CCA 90 bp | CATGTCTTTCACAAACATACCTCTACCCAGTCAATAGAGGATTTATCAAAAGAATTGCAGGGTATTAAATaGCCTGGAGAATCACCAGAA | + |
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Preference number: 4 (lower is better) Translates to: HVFHKHTSTQSIEDLSKELQGIK*PGESPE Trigger: TTCTGGTGATTCTCCAGGCCATTTAATACCCTGCAA...TTCTTTTGATAAATCCTCTATTGACTGGGTAGAGGTATGTTTGTGAAAGACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR TCA 90 bp | CATGTCTTTCACAAACATACCTCTACCCAGTCAATAGAGGATTTATCAAAAGAAGTCCCATATCTGCAATaGAATGCTGCTTATGTATGT | + |
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Preference number: 4 (lower is better) Translates to: HVFHKHTSTQSIEDLSKEVPYLQ*NAAYVC Trigger: ACATACATAAGCAGCATTTCATTGCAGATATGGGAC...TTCTTTTGATAAATCCTCTATTGACTGGGTAGAGGTATGTTTGTGAAAGACATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS GCA 90 bp | CGGGTGGGGGCCGTGGCGTGCTCGGAGAGCCGGGCAAAGCGGAGCTaGATGCCGCCCACCTCCGCAGGCCGGGCCCGCTTACTGGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: RVGAVACSESRAKRS*MPPTSAGRARLLGE Trigger: TTCACCCAGTAAGCGGGCCCGGCCTGCGGAGGTGGGCGGCATGCAGCTCCGCTTTGCCCGGCTCTCCGAGCACGCCACGGCCCCCACCCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000331200.8 ENST00000455976.6 ENST00000558472.5 ENST00000558813.5 ENST00000558978.5 ENST00000559416.5 ENST00000559540.5 ENST00000559935.5 |
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| CDS TCA 90 bp | TGGGTGAAATGGCGGGTGTCTCTGGGGCGGCACCGCCCGCAGCCATaGCTCCCGGGCTCTGAGTTTAGCGGCGCCCTAAGCGCCGGAACC | + |
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Preference number: 5 (lower is better) Translates to: WVKWRVSLGRHRPQP*LPGSEFSGALSAGT Trigger: GGTTCCGGCGCTTAGGGCGCCGCTAAACTCAGAGCCCGGGAGTCATGGCTGCGGGCGGTGCCGCCCCAGAGACACCCGCCATTTCACCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000559416.5 ENST00000559935.5 |
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| CDS TCA 90 bp | AGAAGGCGAGCGAGGAGACCACCGGGGGAAGAGGAGAGCGCACGATaGGCGTCGCCGCAGGGAGCGCGCCAAAACCGAAATTTCCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: RRRARRPPGEEESAR*ASPQGARQNRNFPP Trigger: TGGCGGGAAATTTCGGTTTTGGCGCGCTCCCTGCGGCGACGCTCATCGTGCGCTCTCCTCTTCCCCCGGTGGTCTCCTCGCTCGCCTTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455976.6 |
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| CDS-3UTR CAA 90 bp | CTCACAGAATCTGATGGACAAAACCTAAGTGACACCCAAAACCCTGATACAAAGCAGAGTTTGGGCTGGTaGGGTCCTCGGCACCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: LTESDGQNLSDTQNPDTKQSLGW*GPRHLR Trigger: CCGGAGGTGCCGAGGACCCAACCAGCCCAAACTCTG...CTTTGTATCAGGGTTTTGGGTGTCACTTAGGTTTTGTCCATCAGATTCTGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331200.8 |
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| CDS-3UTR CAA 90 bp | GGTATGCAAAAATGCTGGCTATGTCCCACTGAGTTGATTTCATGGCTCACTAATCATTTCCCCCAGAGTTaGGGCTGGTTGGGTCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: GMQKCWLCPTELISWLTNHFPQS*GWLGPR Trigger: CCGAGGACCCAACCAGCCCAAACTCTGGGGGAAATG...ATTAGTGAGCCATGAAATCAACTCAGTGGGACATAGCCAGCATTTTTGCATACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331200.8 |
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| CDS-3UTR CAA 90 bp | GAAAAGAACACTCTTGCCTGTGCTTCCACAAACTGGGTGGTCAAGTGGGCTGATCTATGTCCCACTGAGTaGATTTCATGGCTCACTAAT | + |
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Preference number: 5 (lower is better) Translates to: EKNTLACASTNWVVKWADLCPTE*ISWLTN Trigger: ATTAGTGAGCCATGAAATCAACTCAGTGGGACATAG...ATCAGCCCACTTGACCACCCAGTTTGTGGAAGCACAGGCAAGAGTGTTCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CAA 90 bp | CTCACAGAATCTGATGGACAAAACCTAAGTGACACCCAAAACCCTGATACAAAGCAGAAAAGAACACTCTaGCCTGTGCTTCCACAAACT | + |
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Preference number: 5 (lower is better) Translates to: LTESDGQNLSDTQNPDTKQKRTL*PVLPQT Trigger: AGTTTGTGGAAGCACAGGCAAGAGTGTTCTTTTCTG...CTTTGTATCAGGGTTTTGGGTGTCACTTAGGTTTTGTCCATCAGATTCTGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CAA 90 bp | CATATCTGCAATGAAATGCTGCTTATGTATGTGAGACAGAAAAACCTGGTGGCTCAGAAAAGAACACTCTaGCCTGTGCTTCCACAAACT | + |
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Preference number: 5 (lower is better) Translates to: HICNEMLLMYVRQKNLVAQKRTL*PVLPQT Trigger: AGTTTGTGGAAGCACAGGCAAGAGTGTTCTTTTCTG...AGCCACCAGGTTTTTCTGTCTCACATACATAAGCAGCATTTCATTGCAGATATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CAA 90 bp | GGTATGCAAAAATGCTGGCTATGTCCCACTGAGTTGATTTCATGGCTCACTAATCTATGTCCCACTGAGTaGATTTCATGGCTCACTAAT | + |
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Preference number: 5 (lower is better) Translates to: GMQKCWLCPTELISWLTNLCPTE*ISWLTN Trigger: ATTAGTGAGCCATGAAATCAACTCAGTGGGACATAG...ATTAGTGAGCCATGAAATCAACTCAGTGGGACATAGCCAGCATTTTTGCATACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS-3UTR CAA 90 bp | TTCCAAAAGATGTTAATCAAGGTAAGCCACAGAATCAGTCCCATATCTGCAATGAGAGGGACAATTACATaGCAGGGTATTAAATGGCCT | + |
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Preference number: 5 (lower is better) Translates to: FQKMLIKVSHRISPISAMRGTIT*QGIKWP Trigger: AGGCCATTTAATACCCTGCAATGTAATTGTCCCTCT...CATTGCAGATATGGGACTGATTCTGTGGCTTACCTTGATTAACATCTTTTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331200.8 ENST00000455976.6 |
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| CDS CCA 72 bp | CCACCTCCGCAGGCCGGGCCCGCTTACTGGGTGAAATaGCGGGTGTCTCTGGGGCGGCACCGCCCGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PPPQAGPAYWVK*RVSLGRHRPQP Trigger: TGGCTGCGGGCGGTGCCGCCCCAGAGACACCCGCCATTTCACCCAGTAAGCGGGCCCGGCCTGCGGAGGTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000559416.5 ENST00000559935.5 |
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| CDS TCA 72 bp | GGCGCCCTAAGCGCCGGAACCGCATCTCGGCGCCGGTaGCAGTTATTGCGCCCGGGGCCGCTCCCCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: GALSAGTASRRR*QLLRPGPLPKL Trigger: CAGCTTGGGGAGCGGCCCCGGGCGCAATAACTGTCACCGGCGCCGAGATGCGGTTCCGGCGCTTAGGGCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559935.5 |
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| CDS TCA 72 bp | TGGCGGGTGTCTCTGGGGCGGCACCGCCCGCAGCCATaGCTCCCGGGCTCTGAGTTTAGCGGCGCCCTAAGC | + |
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Preference number: 6 (lower is better) Translates to: WRVSLGRHRPQP*LPGSEFSGALS Trigger: GCTTAGGGCGCCGCTAAACTCAGAGCCCGGGAGTCATGGCTGCGGGCGGTGCCGCCCCAGAGACACCCGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000559416.5 ENST00000559935.5 |
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| CDS GCA 72 bp | GCGCCGGAACCGCATCTCGGCGCCGGTGACAGTTATTaGGCCCGGGGCCGCTCCCCAAGCTGTGGGCAAGAC | + |
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Preference number: 6 (lower is better) Translates to: APEPHLGAGDSY*ARGRSPSCGQD Trigger: GTCTTGCCCACAGCTTGGGGAGCGGCCCCGGGCGCAATAACTGTCACCGGCGCCGAGATGCGGTTCCGGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559935.5 |
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| CDS CCA 72 bp | CCACCTCCGCAGGCCGGGCCCGCTTACTGGGTGAAATaGCGGGTGTCTCTCCGGACGTGCGCCAGGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PPPQAGPAYWVK*RVSLRTCARLP Trigger: TGGAAGCCTGGCGCACGTCCGGAGAGACACCCGCCATTTCACCCAGTAAGCGGGCCCGGCCTGCGGAGGTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558813.5 |
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| CDS TCA 72 bp | GCGAGGAGACCACCGGGGGAAGAGGAGAGCGCACGATaGGCGTCGCCGCAGGGAGCGCGCCAAAACCGAAAT | + |
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Preference number: 6 (lower is better) Translates to: ARRPPGEEESAR*ASPQGARQNRN Trigger: ATTTCGGTTTTGGCGCGCTCCCTGCGGCGACGCTCATCGTGCGCTCTCCTCTTCCCCCGGTGGTCTCCTCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455976.6 |
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| CDS CCA 72 bp | GCACAGCATCACCCTCGGGCCACTCGAAAGCCACCATaGGCCTTCCTCTCTATCTTCTATTTAGGAAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: AQHHPRATRKPP*AFLSIFYLGRA Trigger: TGCCCTTCCTAAATAGAAGATAGAGAGGAAGGCCCATGGTGGCTTTCGAGTGGCCCGAGGGTGATGCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558367.1 |
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