RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DUSP9 (Homo sapiens)

Ensembl gene IDs: ENSG00000130829

Ensembl transcript IDs: ENST00000342782.4, ENST00000370167.8, ENST00000477033.1

Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCAGCCACTGGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTaGAGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCT +
Preference number: 1 (lower is better)
Translates to: SSHWDPVQRGGTHPS*RGKRREAQGLAELA
Trigger: AGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCCAGTGGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR GCA 90 bp GGTGAGACGGCCCCACGCTGCAAAGACTGCCAGCCCTGGGCTGGGTaGATCAGTGGGCTAGCATGTGTGTGTGAGCGCCGACACGTGCGC +
Preference number: 1 (lower is better)
Translates to: GETAPRCKDCQPWAG*ISGLACVCERRHVR
Trigger: GCGCACGTGTCGGCGCTCACACACACATGCTAGCCCACTGATGCACCCAGCCCAGGGCTGGCAGTCTTTGCAGCGTGGGGCCGTCTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR CCA 90 bp CCACCAGATGTGTGGCCGGGAACCTGCCCAGTAGCTCCTAGGCCATaGATGTGGGCGGCCACTGCACTCTGGGTCCCCATCCCCTGGGAG +
Preference number: 1 (lower is better)
Translates to: PPDVWPGTCPVAPRP*MWAATALWVPIPWE
Trigger: CTCCCAGGGGATGGGGACCCAGAGTGCAGTGGCCGCCCACATCCATGGCCTAGGAGCTACTGGGCAGGTTCCCGGCCACACATCTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR CCA 90 bp AGGCTCCAGGGTGAGACGGCCCCACGCTGCAAAGACTGCCAGCCCTaGGCTGGGTGCATCAGTGGGCTAGCATGTGTGTGTGAGCGCCGA +
Preference number: 1 (lower is better)
Translates to: RLQGETAPRCKDCQP*AGCISGLACVCERR
Trigger: TCGGCGCTCACACACACATGCTAGCCCACTGATGCACCCAGCCCAGGGCTGGCAGTCTTTGCAGCGTGGGGCCGTCTCACCCTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR GCA 90 bp ATCCTCTCCAGGCTCCAGGGTGAGACGGCCCCACGCTGCAAAGACTaGCAGCCCTGGGCTGGGTGCATCAGTGGGCTAGCATGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: ILSRLQGETAPRCKD*QPWAGCISGLACVC
Trigger: ACACACACATGCTAGCCCACTGATGCACCCAGCCCAGGGCTGGCAGTCTTTGCAGCGTGGGGCCGTCTCACCCTGGAGCCTGGAGAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR CCA 90 bp CTCCGCAGCTCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTaGCCACCCTCACTCACAAAGAGCCCCAGTGATCCCGTCAAGACA +
Preference number: 1 (lower is better)
Translates to: LRSSRSETPSPPAVV*PPSLTKSPSDPVKT
Trigger: TGTCTTGACGGGATCACTGGGGCTCTTTGTGAGTGAGGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR CCA 90 bp CGCACACACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTaGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCCCCTTC +
Preference number: 1 (lower is better)
Translates to: RTHKHTHAHPPPTGV*TEMNDCVCLQLGPF
Trigger: GAAGGGGCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTGTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR TCA 90 bp GGATTACAAAAACAAACAAGCATAGATCCTCTCCAGGCTCCAGGGTaGGACGGCCCCACGCTGCAAAGACTGCCAGCCCTGGGCTGGGTG +
Preference number: 1 (lower is better)
Translates to: GLQKQTSIDPLQAPG*DGPTLQRLPALGWV
Trigger: CACCCAGCCCAGGGCTGGCAGTCTTTGCAGCGTGGGGCCGTCTCACCCTGGAGCCTGGAGAGGATCTATGCTTGTTTGTTTTTGTAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CCA 90 bp AGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTGAGCACCCAGGGGGCAGGCTCCGAGCGTaGTCCCGCCATAGGCACGTT +
Preference number: 2 (lower is better)
Translates to: RGKRREAQGLAELAEHPGGRLRA*SRHRHV
Trigger: AACGTGCCTATGGCGGGACCACGCTCGGAGCCTGCC...CCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CCA 90 bp CTCCGCAGCTCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTGGCCACCCCCCAGGGCCGGGACCTaGGCCTGGACAACCACCTGG +
Preference number: 2 (lower is better)
Translates to: LRSSRSETPSPPAVVWPPPRAGT*AWTTTW
Trigger: CCAGGTGGTTGTCCAGGCCCAGGTCCCGGCCCTGGG...GGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGGAG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR TCA 90 bp CTCCGCAGCTCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTGGCCACCCGGCACACACCCTTCCTaGAGGGGGAAGCGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: LRSSRSETPSPPAVVWPPGTHPS*RGKRRE
Trigger: CTCCCTGCGCTTCCCCCTTCAGGAAGGGTGTGTGCC...GGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR GCA 90 bp CTCCGCAGCTCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTGGCCACCCGATGTGGGCGGCCACTaGACTCTGGGTCCCCATCCC +
Preference number: 2 (lower is better)
Translates to: LRSSRSETPSPPAVVWPPDVGGH*TLGPHP
Trigger: GGGATGGGGACCCAGAGTGCAGTGGCCGCCCACATC...GGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CCA 90 bp CTCCGCAGCTCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTGGCCACCCGCCTGGACAACCACCTaGAGAGGGAACCCCCACCCC +
Preference number: 2 (lower is better)
Translates to: LRSSRSETPSPPAVVWPPAWTTT*RGNPHP
Trigger: GGGGTGGGGGTTCCCTCTCCAGGTGGTTGTCCAGGC...GGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CCA 90 bp GGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGCAGGGCCCTTGCCACACGAGTaGGCAGGGACACCCGTGGGT +
Preference number: 2 (lower is better)
Translates to: GIQCNEVAHTLPEGGSAGPLPHE*AGTPVG
Trigger: ACCCACGGGTGTCCCTGCCCACTCGTGTGGCAAGGG...CCCTGCGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR TCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATCCTAGCCGAGCTGGCTaGGCACCCAGGGCCGGGACC +
Preference number: 2 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNPSRAG*APRAGT
Trigger: GGTCCCGGCCCTGGGTGCTCAGCCAGCTCGGCTAGG...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR TCA 90 bp AGAGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCACCTAGCCGAGCTGGCTaGGCACCCAGGGCCGGGACC +
Preference number: 2 (lower is better)
Translates to: RGPSPWWRNREVTTPVMAPSRAG*APRAGT
Trigger: GGTCCCGGCCCTGGGTGCTCAGCCAGCTCGGCTAGG...TGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CCA 90 bp CCACTGGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGGGCAGGCTCCGAGCGTaGTCCCGCCATAGGCACGTT +
Preference number: 2 (lower is better)
Translates to: PLGSSATRWHTPFLKGEAGRLRA*SRHRHV
Trigger: AACGTGCCTATGGCGGGACCACGCTCGGAGCCTGCC...CGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR TCA 90 bp AGAGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAGGACGGCAGCCCGCGTaGGGTATTGCGCTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: RGPSPWWRNREVTTPVMAGRQPA*GIALSP
Trigger: GGGGGAGAGCGCAATACCTCACGCGGGCTGCCGTCC...TGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CCA 90 bp TGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCACCCAGGGCCGGGACCTaGGCCTGGACAACCACCTGG +
Preference number: 2 (lower is better)
Translates to: WWRNREVTTPVMANASPPPRAGT*AWTTTW
Trigger: CCAGGTGGTTGTCCAGGCCCAGGTCCCGGCCCTGGG...TGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CCA 90 bp CTCCGCAGCTCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTGGCCACCCAGAGGCCCAAGCCCTTaGTGGAGAAACAGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: LRSSRSETPSPPAVVWPPRGPSP*WRNREV
Trigger: CACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT...GGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCGCCGGGACCTGGGCCTaGACAACCACCTGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: RNREVTTPVMANASPPSSAGTWA*TTTWRG
Trigger: CCCTCTCCAGGTGGTTGTCCAGGCCCAGGTCCCGGC...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATGCGGCCACTGCACTCTaGGTCCCCATCCCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNAATAL*VPIPWE
Trigger: CTCCCAGGGGATGGGGACCCAGAGTGCAGTGGCCGC...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR TCA 90 bp CCACCCACAGGGGTGTGGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCCCGCAGCTCTCGCTCTaGGACCCCATCTCCTCCGGC +
Preference number: 2 (lower is better)
Translates to: PPTGVWTEMNDCVCLQLGPQLSL*DPISSG
Trigger: GCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGG...GCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR GCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCTGCCCTCCCCTCCCTTaGCACACGAGTGGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: RNREVTTPVMANASPPSSCPPLP*HTSGQG
Trigger: TCCCTGCCCACTCGTGTGGCAAGGGAGGGGAGGGCA...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR GCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATGATGTGGGCGGCCACTaGACTCTGGGTCCCCATCCC +
Preference number: 2 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNDVGGH*TLGPHP
Trigger: GGGATGGGGACCCAGAGTGCAGTGGCCGCCCACATC...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CCA 90 bp AGAGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCACCCTTGCCACACGAGTaGGCAGGGACACCCGTGGGT +
Preference number: 2 (lower is better)
Translates to: RGPSPWWRNREVTTPVMAPLPHE*AGTPVG
Trigger: ACCCACGGGTGTCCCTGCCCACTCGTGTGGCAAGGG...TGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR TCA 90 bp AGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAAGGCACACACCCTTCCTaGAGGGGGAAGCGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: RPKPLVEKQGGDNTSDGKGTHPS*RGKRRE
Trigger: CTCCCTGCGCTTCCCCCTTCAGGAAGGGTGTGTGCC...TTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR GCA 90 bp CCACCCACAGGGGTGTGGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCTGCCCTCCCCTCCCTTaGCACACGAGTGGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: PPTGVWTEMNDCVCLQLGCPPLP*HTSGQG
Trigger: TCCCTGCCCACTCGTGTGGCAAGGGAGGGGAGGGCA...GCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR GCA 90 bp TGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAGCCACTGGGATCCAGTaGAACGAGGTGGCACACACC +
Preference number: 2 (lower is better)
Translates to: WWRNREVTTPVMANASPPATGIQ*NEVAHT
Trigger: GGTGTGTGCCACCTCGTTGCACTGGATCCCAGTGGC...TGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CCA 90 bp CCACCCACAGGGGTGTGGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCGTAGCAGCGGCTGTGTaGGCCCCGCAGCAGCAAAAG +
Preference number: 2 (lower is better)
Translates to: PPTGVWTEMNDCVCLQLGVAAAV*APQQQK
Trigger: CTTTTGCTGCTGCGGGGCCCACACAGCCGCTGCTAC...GCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATAGAGGCCCAAGCCCTTaGTGGAGAAACAGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNRGPSP*WRNREV
Trigger: CACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATCCTCCGGCGGTAGTTTaGCCACCCTCACTCACAAAG +
Preference number: 2 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNPPAVV*PPSLTK
Trigger: CTTTGTGAGTGAGGGTGGCCAAACTACCGCCGGAGG...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CCA 90 bp TGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCATCCAGTGCAACGAGGTaGCACACACCCTTCCTGAAG +
Preference number: 2 (lower is better)
Translates to: WWRNREVTTPVMANASPPSSATR*HTPFLK
Trigger: CTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGA...TGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR TCA 72 bp GAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTaGGCACCCAGGGCCGGGACCTGGGCCTGGACAACC +
Preference number: 3 (lower is better)
Translates to: EAQGGAGPSRAG*APRAGTWAWTT
Trigger: GGTTGTCCAGGCCCAGGTCCCGGCCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CAA 90 bp AGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTGAGCACCCAGGGCTGCCCTCCCCTCCCTaGCCACACGAGTGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: RGKRREAQGLAELAEHPGLPSPP*PHEWAG
Trigger: CCCTGCCCACTCGTGTGGCAAGGGAGGGGAGGGCAG...CCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR GCA 72 bp GCCCCACGCTGCAAAGACTGCCAGCCCTGGGCTGGGTaGATCAGTGGGCTAGCATGTGTGTGTGAGCGCCGA +
Preference number: 3 (lower is better)
Translates to: APRCKDCQPWAG*ISGLACVCERR
Trigger: TCGGCGCTCACACACACATGCTAGCCCACTGATGCACCCAGCCCAGGGCTGGCAGTCTTTGCAGCGTGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR CCA 72 bp TCCCCCAAGCAGCCACTGGGATCCAGTGCAACGAGGTaGCACACACCCTTCCTGAAGGGGGAAGCGCAGGGA +
Preference number: 3 (lower is better)
Translates to: SPKQPLGSSATR*HTPFLKGEAQG
Trigger: TCCCTGCGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCCAGTGGCTGCTTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CAA 90 bp AGAGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCACTGCCCTCCCCTCCCTaGCCACACGAGTGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: RGPSPWWRNREVTTPVMALPSPP*PHEWAG
Trigger: CCCTGCCCACTCGTGTGGCAAGGGAGGGGAGGGCAG...TGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CAA 90 bp AGAGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCACCCGCCATAGGCACGTaGATTAGGACGGCAGCCCGC +
Preference number: 3 (lower is better)
Translates to: RGPSPWWRNREVTTPVMAPAIGT*IRTAAR
Trigger: GCGGGCTGCCGTCCTAATCAACGTGCCTATGGCGGG...TGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR CCA 72 bp TCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTaGCCACCCTCACTCACAAAGAGCCCCAGTGATCCC +
Preference number: 3 (lower is better)
Translates to: SRSETPSPPAVV*PPSLTKSPSDP
Trigger: GGGATCACTGGGGCTCTTTGTGAGTGAGGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR-3UTR CAA 90 bp AGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACCCGCCATAGGCACGTaGATTAGGACGGCAGCCCGC +
Preference number: 3 (lower is better)
Translates to: RPKPLVEKQGGDNTSDGKPAIGT*IRTAAR
Trigger: GCGGGCTGCCGTCCTAATCAACGTGCCTATGGCGGG...TTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR TCA 72 bp ACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATaGATGACTGTGTGTGTCTGCAGCTTGGCCCCTTCC +
Preference number: 3 (lower is better)
Translates to: THTRHPQGCGQK*MTVCVCSLAPS
Trigger: GGAAGGGGCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR CCA 72 bp AAGCACACACACGCACACCCGCCACCCACAGGGGTGTaGACAGAAATGAATGACTGTGTGTGTCTGCAGCTT +
Preference number: 3 (lower is better)
Translates to: KHTHAHPPPTGV*TEMNDCVCLQL
Trigger: AAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTGAGCACCCAGGGCCCAGGGCCGGGACCTaGGCCTGGACAACCACCTGG +
Preference number: 4 (lower is better)
Translates to: RGKRREAQGLAELAEHPGPRAGT*AWTTTW
Trigger: CCAGGTGGTTGTCCAGGCCCAGGTCCCGGCCCTGGG...CCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTGAGCACCCAGGGCGTACAGCTCGCGGCTaGGGCAGTCCAGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RGKRREAQGLAELAEHPGRTARG*GSPGAG
Trigger: TCCTGCTCCTGGACTGCCGCAGCCGCGAGCTGTACG...CCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTGAGCACCCAGGGGCTTCTGCAGCAGGGTaGCCAGCACCGACTCGGCCT +
Preference number: 4 (lower is better)
Translates to: RGKRREAQGLAELAEHPGASAAG*PAPTRP
Trigger: AGGCCGAGTCGGTGCTGGGCACCCTGCTGCAGAAGC...CCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTGAGCACCCAGGGGATGTGGGCGGCCACTaGACTCTGGGTCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: RGKRREAQGLAELAEHPGDVGGH*TLGPHP
Trigger: GGGATGGGGACCCAGAGTGCAGTGGCCGCCCACATC...CCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTGAGCACCCAGGGGAGACGGCCCCACGCTaGAAAGACTGCCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RGKRREAQGLAELAEHPGETAPR*KDCQPW
Trigger: CCAGGGCTGGCAGTCTTTGCAGCGTGGGGCCGTCTC...CCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTGAGCACCCAGGGGGCCCAGACCCTCCATaGGCGATCGGCTCCCTACAC +
Preference number: 4 (lower is better)
Translates to: RGKRREAQGLAELAEHPGGPDPP*AIGSLH
Trigger: GTGTAGGGAGCCGATCGCCCATGGAGGGTCTGGGCC...CCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTGAGCACCCAGGGCCAGGCCACAGCTCATaGAGTCGCGGTCAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RGKRREAQGLAELAEHPGPGHSS*SRGQPR
Trigger: CCGAGGCTGACCGCGACTCCATGAGCTGTGGCCTGG...CCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTGAGCACCCAGGGCCACTGGTGGGGGTGTaGCACCCTCCGAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: RGKRREAQGLAELAEHPGPLVGV*HPPNPG
Trigger: GCCTGGATTCGGAGGGTGCCACACCCCCACCAGTGG...CCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTGAGCACCCAGGGAGAAGGAGGGCGGGTTaGAGGCCGCAGATGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RGKRREAQGLAELAEHPGRRRAG*RPQMPA
Trigger: GGCAGGCATCTGCGGCCTCCAACCCGCCCTCCTTCT...CCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTGAGCACCCAGGGCTGCCAGCCCTGGGCTaGGTGCATCAGTGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: RGKRREAQGLAELAEHPGLPALG*VHQWAS
Trigger: GCTAGCCCACTGATGCACCCAGCCCAGGGCTGGCAG...CCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp AGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTGAGCACCCAGGGCTGGTCTCACACAGGTaGGGGCACTCGGCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: RGKRREAQGLAELAEHPGLVSHR*GHSAWN
Trigger: ATTCCAGGCCGAGTGCCCTCACCTGTGTGAGACCAG...CCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CTCCGCAGCTCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTGGCCACCCGCACCGGCCGCTTCCTaGCAGCCGGACCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LRSSRSETPSPPAVVWPPAPAAS*QPDPAS
Trigger: GGAAGCTGGGTCCGGCTGCCAGGAAGCGGCCGGTGC...GGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS-3UTR CCA 90 bp AGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTGAGCACCCAGGGCCCCCAAGCAGCCACTaGGATCCAGTGCAACGAGGT +
Preference number: 4 (lower is better)
Translates to: RGKRREAQGLAELAEHPGPPSSH*DPVQRG
Trigger: ACCTCGTTGCACTGGATCCCAGTGGCTGCTTGGGGG...CCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp CTCCGCAGCTCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTGGCCACCCCTCCAGGCTCCAGGGTaGGACGGCCCCACGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LRSSRSETPSPPAVVWPPLQAPG*DGPTLQ
Trigger: TTGCAGCGTGGGGCCGTCTCACCCTGGAGCCTGGAG...GGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp GGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGCAGGGCCGCAGCCCCACTGGTaGGGGTGTGGCACCCTCCGA +
Preference number: 4 (lower is better)
Translates to: GIQCNEVAHTLPEGGSAGPQPHW*GCGTLR
Trigger: TCGGAGGGTGCCACACCCCCACCAGTGGGGCTGCGG...CCCTGCGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp CCACTGGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGGGACGGCAGCCCGCGTaGGGTATTGCGCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PLGSSATRWHTPFLKGEAGRQPA*GIALSP
Trigger: GGGGGAGAGCGCAATACCTCACGCGGGCTGCCGTCC...CGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCCAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CTCCGCAGCTCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTGGCCACCCCCACTGGTGGGGGTGTaGCACCCTCCGAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: LRSSRSETPSPPAVVWPPPLVGV*HPPNPG
Trigger: GCCTGGATTCGGAGGGTGCCACACCCCCACCAGTGG...GGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CCACTGGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGTGCCCGCAGCCCCACTaGTGGGGGTGTGGCACCCTC +
Preference number: 4 (lower is better)
Translates to: PLGSSATRWHTPFLKGEACPQPH*WGCGTL
Trigger: GAGGGTGCCACACCCCCACCAGTGGGGCTGCGGGCA...CGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCCAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CTCCGCAGCTCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTGGCCACCCACCCCCGCCAAGCAGTaGACGAGCACCCCGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LRSSRSETPSPPAVVWPPTPAKQ*TSTPQF
Trigger: GAACTGCGGGGTGCTCGTCCACTGCTTGGCGGGGGT...GGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp GGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGCAGGGGCTTCTGCAGCAGGGTaGCCAGCACCGACTCGGCCT +
Preference number: 4 (lower is better)
Translates to: GIQCNEVAHTLPEGGSAGASAAG*PAPTRP
Trigger: AGGCCGAGTCGGTGCTGGGCACCCTGCTGCAGAAGC...CCCTGCGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp CTCCGCAGCTCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTGGCCACCCGTGTGGCCGGGAACCTaGCCAGTAGCTCCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: LRSSRSETPSPPAVVWPPVWPGT*PVAPRP
Trigger: TGGCCTAGGAGCTACTGGGCAGGTTCCCGGCCACAC...GGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CCACTGGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGGCCGGGACCTGGGCCTaGACAACCACCTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PLGSSATRWHTPFLKGEAAGTWA*TTTWRG
Trigger: CCCTCTCCAGGTGGTTGTCCAGGCCCAGGTCCCGGC...CGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCCAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CTCCGCAGCTCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTGGCCACCCCCTAGGCCATGGATGTaGGCGGCCACTGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: LRSSRSETPSPPAVVWPPPRPWM*AATALW
Trigger: CCAGAGTGCAGTGGCCGCCCACATCCATGGCCTAGG...GGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
3UTR CAA 72 bp GAGGCAGGCTCCGAGCGTGGTCCCGCCATAGGCACGTaGATTAGGACGGCAGCCCGCGTGAGGTATTGCGCT +
Preference number: 4 (lower is better)
Translates to: EAGSERGPAIGT*IRTAARVRYCA
Trigger: AGCGCAATACCTCACGCGGGCTGCCGTCCTAATCAACGTGCCTATGGCGGGACCACGCTCGGAGCCTGCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp TGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCACCTAGCCGAGCTGGCTaGGCACCCAGGGCCGGGACC +
Preference number: 4 (lower is better)
Translates to: WWRNREVTTPVMANASPPPSRAG*APRAGT
Trigger: GGTCCCGGCCCTGGGTGCTCAGCCAGCTCGGCTAGG...TGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp GGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGCAGGGGCTAGCATGTGTGTGTaGGCGCCGACACGTGCGCAC +
Preference number: 4 (lower is better)
Translates to: GIQCNEVAHTLPEGGSAGASMCV*APTRAH
Trigger: GTGCGCACGTGTCGGCGCTCACACACACATGCTAGC...CCCTGCGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCAGGGCGGGGCGGCGGTaGAGGCTCGCACGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSRAGRR*RLARGS
Trigger: GCTTCCACGTGCGAGCCTGCACCGCCGCCCCGCCCT...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS-3UTR GCA 90 bp CTCCGCAGCTCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTGGCCACCCGCCACTGGGATCCAGTaGAACGAGGTGGCACACACC +
Preference number: 4 (lower is better)
Translates to: LRSSRSETPSPPAVVWPPATGIQ*NEVAHT
Trigger: GGTGTGTGCCACCTCGTTGCACTGGATCCCAGTGGC...GGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp CCACTGGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGCCACGCTGCAAAGACTaGCAGCCCTGGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PLGSSATRWHTPFLKGEAPRCKD*QPWAGC
Trigger: GCACCCAGCCCAGGGCTGGCAGTCTTTGCAGCGTGG...CGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CCACTGGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGACCCCCGCCAAGCAGTaGACGAGCACCCCGCAGTTC +
Preference number: 4 (lower is better)
Translates to: PLGSSATRWHTPFLKGEATPAKQ*TSTPQF
Trigger: GAACTGCGGGGTGCTCGTCCACTGCTTGGCGGGGGT...CGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATCCACGGGGCCCTAGGTaGGGGCCAGCTCGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNPRGPR*GPARRR
Trigger: GCGCCTTCGAGCTGGCCCCCACCTAGGGCCCCGTGG...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CTCCGCAGCTCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTGGCCACCCGTAGCTCCTAGGCCATaGATGTGGGCGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: LRSSRSETPSPPAVVWPPVAPRP*MWAATA
Trigger: TGCAGTGGCCGCCCACATCCATGGCCTAGGAGCTAC...GGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATGAGGCCGCAGATGCCTaGCCCCCACTGCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNEAADA*PPLPCS
Trigger: GGAGCAGGGCAGTGGGGGGCAGGCATCTGCGGCCTC...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp GGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGCAGGGCAGCCCTGGGCTGGGTaGATCAGTGGGCTAGCATGT +
Preference number: 4 (lower is better)
Translates to: GIQCNEVAHTLPEGGSAGQPWAG*ISGLAC
Trigger: ACATGCTAGCCCACTGATGCACCCAGCCCAGGGCTG...CCCTGCGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp TGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAACGGGCGCTCCGCTCTaGTCGGTTCTCCGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: WWRNREVTTPVMANASPPTGAPL*SVLRAG
Trigger: ACCGGCGCGGAGAACCGAGCAGAGCGGAGCGCCCGT...TGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370167.8
CDS-3UTR CCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATGTGCAGGCTCGCACGTaGAAGCCGAGCCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNVQART*KPSPAQ
Trigger: CTGCGCGGGGCTCGGCTTCCACGTGCGAGCCTGCAC...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS-3UTR CCA 90 bp AGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAAGAGAGTCCCCAGGCCTaGCCGCCAGGAGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RPKPLVEKQGGDNTSDGKESPQA*PPGEGG
Trigger: CCCGCCCTCTCCTGGCGGCCAGGCCTGGGGACTCTC...TTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS-3UTR CCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCCGCGCGTGGACGTTCTaGCCACGGCCACTGCCACGG +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSRAWTF*PRPLPR
Trigger: CCGTGGCAGTGGCCGTGGCCAGAACGTCCACGCGCG...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS-3UTR CCA 90 bp AGAGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCACGGCTCCCTACACGCTaGACCACGGGCGCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: RGPSPWWRNREVTTPVMARLPTR*TTGAGA
Trigger: CGCTCCAGCGCCCGTGGTCCAGCGTGTAGGGAGCCG...TGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS-3UTR CCA 90 bp TGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAGCACCGGCGCCATGCTaGAGCCGGCACGGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: WWRNREVTTPVMANASPPAPAPC*SRHGQQ
Trigger: TTGCTGGCCGTGCCGGCTCCAGCATGGCGCCGGTGC...TGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATGCACCGGCGCCATGCTaGAGCCGGCACGGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNAPAPC*SRHGQQ
Trigger: TTGCTGGCCGTGCCGGCTCCAGCATGGCGCCGGTGC...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGAGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCACCGCAGCCCCACTGGTaGGGGTGTGGCACCCTCCGA +
Preference number: 4 (lower is better)
Translates to: RGPSPWWRNREVTTPVMAPQPHW*GCGTLR
Trigger: TCGGAGGGTGCCACACCCCCACCAGTGGGGCTGCGG...TGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTGAGCACCCAGGGCTTCTCGAAGAAGTTTaGGAGGTTGGGGGTGACATT +
Preference number: 4 (lower is better)
Translates to: RGKRREAQGLAELAEHPGLLEEV*EVGGDI
Trigger: AATGTCACCCCCAACCTCCCAAACTTCTTCGAGAAG...CCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACCACGGGGCCCTAGGTaGGGGCCAGCTCGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: RPKPLVEKQGGDNTSDGKPRGPR*GPARRR
Trigger: GCGCCTTCGAGCTGGCCCCCACCTAGGGCCCCGTGG...TTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CCACTGGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGCCTAGGCCATGGATGTaGGCGGCCACTGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: PLGSSATRWHTPFLKGEAPRPWM*AATALW
Trigger: CCAGAGTGCAGTGGCCGCCCACATCCATGGCCTAGG...CGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCCAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp CCACTGGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGCGGCCTGGAATCTGCTaGAGCCTCCCTGGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: PLGSSATRWHTPFLKGEARPGIC*SLPGGS
Trigger: ACTACCTCCAGGGAGGCTTCAGCAGATTCCAGGCCG...CGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCCAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp AGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAAGGACGGCAGCCCGCGTaGGGTATTGCGCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: RPKPLVEKQGGDNTSDGKGRQPA*GIALSP
Trigger: GGGGGAGAGCGCAATACCTCACGCGGGCTGCCGTCC...TTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp AGAGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCACTCCAGGCTCCAGGGTaGGACGGCCCCACGCTGCAA +
Preference number: 4 (lower is better)
Translates to: RGPSPWWRNREVTTPVMALQAPG*DGPTLQ
Trigger: TTGCAGCGTGGGGCCGTCTCACCCTGGAGCCTGGAG...TGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAATCTGGCCACGGCCACTaGCACGGCGGAACGCGAGGC +
Preference number: 4 (lower is better)
Translates to: RPKPLVEKQGGDNTSDGKSGHGH*HGGTRG
Trigger: GCCTCGCGTTCCGCCGTGGCAGTGGCCGTGGCCAGA...TTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS-3UTR GCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATAGCCCAGGCACAGGCTaGCCAACCCCACCACGGGCA +
Preference number: 4 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNSPGTG*PTPPRA
Trigger: TGCCCGTGGTGGGGTTGGGCAGCCTGTGCCTGGGCT...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCAGCCCAGGCACAGGCTaGCCAACCCCACCACGGGCA +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSSPGTG*PTPPRA
Trigger: TGCCCGTGGTGGGGTTGGGCAGCCTGTGCCTGGGCT...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCCCACTGCCCTGCTCCTaGGAGTGGCGCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSPLPCS*EWRSSS
Trigger: GCTGGAGGAGCGCCACTCGCAGGAGCAGGGCAGTGG...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCAGCGAGATCCGGCGGTaGACGACCGCGCGTGGACGT +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSSEIRR*TTARGR
Trigger: ACGTCCACGCGCGGTCGTCCACCGCCGGATCTCGCT...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS-3UTR CCA 90 bp CCACCCACAGGGGTGTGGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCCTGGACCACGGGCGCTaGAGCGAGATCCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: PPTGVWTEMNDCVCLQLGLDHGR*SEIRRW
Trigger: CCACCGCCGGATCTCGCTCCAGCGCCCGTGGTCCAG...GCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS-3UTR CCA 90 bp CCACCCACAGGGGTGTGGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCTGCCCGCAGCCCCACTaGTGGGGGTGTGGCACCCTC +
Preference number: 4 (lower is better)
Translates to: PPTGVWTEMNDCVCLQLGCPQPH*WGCGTL
Trigger: GAGGGTGCCACACCCCCACCAGTGGGGCTGCGGGCA...GCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CCACTGGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGCCAGGCTCTCCAAATTaGCGGAATCCCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: PLGSSATRWHTPFLKGEAPGSPN*RNPGHC
Trigger: GCAGTGCCCGGGATTCCGCCAATTTGGAGAGCCTGG...CGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCCAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCCCCTGCTCCTGCGAGTaGCGCTCCTCCAGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSPCSCE*RSSSRK
Trigger: CTTGCGGCTGGAGGAGCGCCACTCGCAGGAGCAGGG...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp TGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAGCCGGGACCTGGGCCTaGACAACCACCTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: WWRNREVTTPVMANASPPAGTWA*TTTWRG
Trigger: CCCTCTCCAGGTGGTTGTCCAGGCCCAGGTCCCGGC...TGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CCACCCACAGGGGTGTGGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCCGGCTCCCTACACGCTaGACCACGGGCGCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: PPTGVWTEMNDCVCLQLGRLPTR*TTGAPL
Trigger: GAGCGGAGCGCCCGTGGTCCAGCGTGTAGGGAGCCG...GCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370167.8
CDS-3UTR TCA 90 bp AGAGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAGGCACACACCCTTCCTaGAGGGGGAAGCGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RGPSPWWRNREVTTPVMAGTHPS*RGKRRE
Trigger: CTCCCTGCGCTTCCCCCTTCAGGAAGGGTGTGTGCC...TGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp AGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACCGCAGCTCTCGCTCTaGGACCCCATCTCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: RPKPLVEKQGGDNTSDGKPQLSL*DPISSG
Trigger: GCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGG...TTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCCGTACAGCTCGCGGCTaGGGCAGTCCAGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSRTARG*GSPGAG
Trigger: TCCTGCTCCTGGACTGCCGCAGCCGCGAGCTGTACG...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATTCAGCGCCCCACCGATaGGCGCCGACTCGTACAGCT +
Preference number: 4 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNSAPHR*APTRTA
Trigger: AGCTGTACGAGTCGGCGCGCATCGGTGGGGCGCTGA...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp CCACCCACAGGGGTGTGGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCCCACTGCCCTGCTCCTaGGAGTGGCGCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PPTGVWTEMNDCVCLQLGPLPCS*EWRSSS
Trigger: GCTGGAGGAGCGCCACTCGCAGGAGCAGGGCAGTGG...GCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp TGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCATGCCCTCCCCTCCCTTaGCACACGAGTGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: WWRNREVTTPVMANASPPCPPLP*HTSGQG
Trigger: TCCCTGCCCACTCGTGTGGCAAGGGAGGGGAGGGCA...TGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCCCACGCTGCAAAGACTaGCAGCCCTGGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSPRCKD*QPWAGC
Trigger: GCACCCAGCCCAGGGCTGGCAGTCTTTGCAGCGTGG...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAATCCGCGCCGGTTCCCTaGGTCGCGGCCGGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: RPKPLVEKQGGDNTSDGKSAPVP*VAAGKF
Trigger: AAACTTCCCGGCCGCGACGCAGGGAACCGGCGCGGA...TTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370167.8
CDS-3UTR CCA 90 bp CCACCCACAGGGGTGTGGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCGTGGACGACCGCGCGTaGACGTTCTGGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: PPTGVWTEMNDCVCLQLGVDDRA*TFWPRP
Trigger: TGGCCGTGGCCAGAACGTCCACGCGCGGTCGTCCAC...GCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS-3UTR CCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATGGCCCAGACCCTCCATaGGCGATCGGCTCCCTACAC +
Preference number: 4 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNGPDPP*AIGSLH
Trigger: GTGTAGGGAGCCGATCGCCCATGGAGGGTCTGGGCC...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATCCAGGCCACAGCTCATaGAGTCGCGGTCAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNPGHSS*SRGQPR
Trigger: CCGAGGCTGACCGCGACTCCATGAGCTGTGGCCTGG...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp GGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGCAGGGAGCACCCCGCAGTTCTaGGACAAGGCCTCATCAATG +
Preference number: 4 (lower is better)
Translates to: GIQCNEVAHTLPEGGSAGSTPQF*DKASSM
Trigger: CATTGATGAGGCCTTGTCCCAGAACTGCGGGGTGCT...CCCTGCGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCAGAAGGAGGGCGGGTTaGAGGCCGCAGATGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSRRRAG*RPQMPA
Trigger: GGCAGGCATCTGCGGCCTCCAACCCGCCCTCCTTCT...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp TGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCACCCTTGCCACACGAGTaGGCAGGGACACCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: WWRNREVTTPVMANASPPPLPHE*AGTPVG
Trigger: ACCCACGGGTGTCCCTGCCCACTCGTGTGGCAAGGG...TGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATCCCTTGCCACACGAGTaGGCAGGGACACCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNPLPHE*AGTPVG
Trigger: ACCCACGGGTGTCCCTGCCCACTCGTGTGGCAAGGG...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp TGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAGGCAGGCTCCGAGCGTaGTCCCGCCATAGGCACGTT +
Preference number: 4 (lower is better)
Translates to: WWRNREVTTPVMANASPPGRLRA*SRHRHV
Trigger: AACGTGCCTATGGCGGGACCACGCTCGGAGCCTGCC...TGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATGCCTGGACAACCACCTaGAGAGGGAACCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNAWTTT*RGNPHP
Trigger: GGGGTGGGGGTTCCCTCTCCAGGTGGTTGTCCAGGC...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CCACCCACAGGGGTGTGGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCGCGGCCACTGCACTCTaGGTCCCCATCCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PPTGVWTEMNDCVCLQLGAATAL*VPIPWE
Trigger: CTCCCAGGGGATGGGGACCCAGAGTGCAGTGGCCGC...GCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATCTGCCAGCCCTGGGCTaGGTGCATCAGTGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNLPALG*VHQWAS
Trigger: GCTAGCCCACTGATGCACCCAGCCCAGGGCTGGCAG...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp GGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGCAGGGGGTCATAGGCATCGTTaGGAGAGAGGTGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GIQCNEVAHTLPEGGSAGGHRHR*ERGGAS
Trigger: AGAAGCTCCACCTCTCTCTCAACGATGCCTATGACC...CCCTGCGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp CCACCCACAGGGGTGTGGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCGGCACACACCCTTCCTaGAGGGGGAAGCGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PPTGVWTEMNDCVCLQLGGTHPS*RGKRRE
Trigger: CTCCCTGCGCTTCCCCCTTCAGGAAGGGTGTGTGCC...GCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp TGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAGCTAGCATGTGTGTGTaGGCGCCGACACGTGCGCAC +
Preference number: 4 (lower is better)
Translates to: WWRNREVTTPVMANASPPASMCV*APTRAH
Trigger: GTGCGCACGTGTCGGCGCTCACACACACATGCTAGC...TGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp TGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCATCCTCTCGCAGCTTCTaGAGCAGGGTGCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: WWRNREVTTPVMANASPPSSRSF*SRVPST
Trigger: GGTGCTGGGCACCCTGCTGCAGAAGCTGCGAGAGGA...TGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAAGATGTGGGCGGCCACTaGACTCTGGGTCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: RPKPLVEKQGGDNTSDGKDVGGH*TLGPHP
Trigger: GGGATGGGGACCCAGAGTGCAGTGGCCGCCCACATC...TTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCGTGTGGCCGGGAACCTaGCCAGTAGCTCCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSVWPGT*PVAPRP
Trigger: TGGCCTAGGAGCTACTGGGCAGGTTCCCGGCCACAC...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp CCACCCACAGGGGTGTGGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCGAGACGGCCCCACGCTaGAAAGACTGCCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PPTGVWTEMNDCVCLQLGETAPR*KDCQPW
Trigger: CCAGGGCTGGCAGTCTTTGCAGCGTGGGGCCGTCTC...GCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CCACTGGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGAGCACCCCGCAGTTCTaGGACAAGGCCTCATCAATG +
Preference number: 4 (lower is better)
Translates to: PLGSSATRWHTPFLKGEASTPQF*DKASSM
Trigger: CATTGATGAGGCCTTGTCCCAGAACTGCGGGGTGCT...CGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CCACCCACAGGGGTGTGGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCGCCTGGACAACCACCTaGAGAGGGAACCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: PPTGVWTEMNDCVCLQLGAWTTT*RGNPHP
Trigger: GGGGTGGGGGTTCCCTCTCCAGGTGGTTGTCCAGGC...GCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATGTAGCAGCGGCTGTGTaGGCCCCGCAGCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNVAAAV*APQQQK
Trigger: CTTTTGCTGCTGCGGGGCCCACACAGCCGCTGCTAC...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CTCCGCAGCTCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTGGCCACCCCCACCCACAGGGGTGTaGACAGAAATGAATGACTGT +
Preference number: 4 (lower is better)
Translates to: LRSSRSETPSPPAVVWPPPPTGV*TEMNDC
Trigger: ACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG...GGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCCGGCCTGGAATCTGCTaGAGCCTCCCTGGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSRPGIC*SLPGGS
Trigger: ACTACCTCCAGGGAGGCTTCAGCAGATTCCAGGCCG...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCCTGGTCTCACACAGGTaGGGGCACTCGGCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSLVSHR*GHSAWN
Trigger: ATTCCAGGCCGAGTGCCCTCACCTGTGTGAGACCAG...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp GGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGCAGGGACAAGGCCTCATCAATaGACTCAATGGCCTCCGGAA +
Preference number: 4 (lower is better)
Translates to: GIQCNEVAHTLPEGGSAGTRPHQ*TQWPPE
Trigger: TTCCGGAGGCCATTGAGTTCATTGATGAGGCCTTGT...CCCTGCGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAATCCTCTCGCAGCTTCTaGAGCAGGGTGCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: RPKPLVEKQGGDNTSDGKSSRSF*SRVPST
Trigger: GGTGCTGGGCACCCTGCTGCAGAAGCTGCGAGAGGA...TTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCGCCACTGGGATCCAGTaGAACGAGGTGGCACACACC +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSATGIQ*NEVAHT
Trigger: GGTGTGTGCCACCTCGTTGCACTGGATCCCAGTGGC...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCCAGCCCTGGGCTGGGTaGATCAGTGGGCTAGCATGT +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSQPWAG*ISGLAC
Trigger: ACATGCTAGCCCACTGATGCACCCAGCCCAGGGCTG...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATCCCCCAAGCAGCCACTaGGATCCAGTGCAACGAGGT +
Preference number: 4 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNPPSSH*DPVQRG
Trigger: ACCTCGTTGCACTGGATCCCAGTGGCTGCTTGGGGG...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp TGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCCCACCAGATGTGTaGCCGGGAACCTGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: WWRNREVTTPVMANASPPSPPDV*PGTCPV
Trigger: TACTGGGCAGGTTCCCGGCCACACATCTGGTGGGCT...TGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCAGCCCACCAGATGTGTaGCCGGGAACCTGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSSPPDV*PGTCPV
Trigger: TACTGGGCAGGTTCCCGGCCACACATCTGGTGGGCT...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAAGTAGCAGCGGCTGTGTaGGCCCCGCAGCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: RPKPLVEKQGGDNTSDGKVAAAV*APQQQK
Trigger: CTTTTGCTGCTGCGGGGCCCACACAGCCGCTGCTAC...TTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGGAATCCCGGGCACTaGCCAGATAGAGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: RPKPLVEKQGGDNTSDGKRNPGH*PDRGWA
Trigger: TGCCCAACCTCTATCTGGGCAGTGCCCGGGATTCCG...TTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp CCACCCACAGGGGTGTGGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCCGGAATCCCGGGCACTaGCCAGATAGAGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: PPTGVWTEMNDCVCLQLGRNPGH*PDRGWA
Trigger: TGCCCAACCTCTATCTGGGCAGTGCCCGGGATTCCG...GCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCCCTCCAGCCGCAAGCTaGGCTCAAAGTCCAGCAACT +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSPPAAS*AQSPAT
Trigger: AGTTGCTGGACTTTGAGCGCAGCTTGCGGCTGGAGG...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR GCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATCCTCCAGCCGCAAGCTaGGCTCAAAGTCCAGCAACT +
Preference number: 4 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNPPAAS*AQSPAT
Trigger: AGTTGCTGGACTTTGAGCGCAGCTTGCGGCTGGAGG...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACCAGGCTCTCCAAATTaGCGGAATCCCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: RPKPLVEKQGGDNTSDGKPGSPN*RNPGHC
Trigger: GCAGTGCCCGGGATTCCGCCAATTTGGAGAGCCTGG...TTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGAGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAGAGGCCCAAGCCCTTaGTGGAGAAACAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RGPSPWWRNREVTTPVMARGPSP*WRNREV
Trigger: CACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT...TGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCAGAGGCCCAAGCCCTTaGTGGAGAAACAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSRGPSP*WRNREV
Trigger: CACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CCACCCACAGGGGTGTGGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCGTAGCTCCTAGGCCATaGATGTGGGCGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: PPTGVWTEMNDCVCLQLGVAPRP*MWAATA
Trigger: TGCAGTGGCCGCCCACATCCATGGCCTAGGAGCTAC...GCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGAGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCACCTCCGGCGGTAGTTTaGCCACCCTCACTCACAAAG +
Preference number: 4 (lower is better)
Translates to: RGPSPWWRNREVTTPVMAPPAVV*PPSLTK
Trigger: CTTTGTGAGTGAGGGTGGCCAAACTACCGCCGGAGG...TGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp TGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCGGATGCCCAGTTTaGCCAGGCTCTCCAAATTGG +
Preference number: 4 (lower is better)
Translates to: WWRNREVTTPVMANASPPSGCPV*PGSPNW
Trigger: CCAATTTGGAGAGCCTGGCCAAACTGGGCATCCGCT...TGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCAGCGGATGCCCAGTTTaGCCAGGCTCTCCAAATTGG +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSSGCPV*PGSPNW
Trigger: CCAATTTGGAGAGCCTGGCCAAACTGGGCATCCGCT...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCTCCAGTGCAACGAGGTaGCACACACCCTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSSSATR*HTPFLK
Trigger: CTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGA...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp CCACCCACAGGGGTGTGGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCCCTCCGGCGGTAGTTTaGCCACCCTCACTCACAAAG +
Preference number: 4 (lower is better)
Translates to: PPTGVWTEMNDCVCLQLGPPAVV*PPSLTK
Trigger: CTTTGTGAGTGAGGGTGGCCAAACTACCGCCGGAGG...GCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp AGAGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAGGTCATAGGCATCGTTaGGAGAGAGGTGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RGPSPWWRNREVTTPVMAGHRHR*ERGGAS
Trigger: AGAAGCTCCACCTCTCTCTCAACGATGCCTATGACC...TGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAATCCAGTGCAACGAGGTaGCACACACCCTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: RPKPLVEKQGGDNTSDGKSSATR*HTPFLK
Trigger: CTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGA...TTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATGGGTGTGGACAGAAATaGATGACTGTGTGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNGCGQK*MTVCVC
Trigger: GCAGACACACACAGTCATTCATTTCTGTCCACACCC...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCGTGGACAGAAATGAATaGCTGTGTGTGTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSVDRNE*LCVSAA
Trigger: AGCTGCAGACACACACAGTCATTCATTTCTGTCCAC...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp AGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAAGGGTGTGGACAGAAATaGATGACTGTGTGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: RPKPLVEKQGGDNTSDGKGCGQK*MTVCVC
Trigger: GCAGACACACACAGTCATTCATTTCTGTCCACACCC...TTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGAAACAGGGAGGTGACAACACCAGTGATGGCAAACGCCTCTCCCCCAAGCAGCCTTCTCGAAGAAGTTTaGGAGGTTGGGGGTGACATT +
Preference number: 4 (lower is better)
Translates to: RNREVTTPVMANASPPSSLLEEV*EVGGDI
Trigger: AATGTCACCCCCAACCTCCCAAACTTCTTCGAGAAG...GCTGCTTGGGGGAGAGGCGTTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CCA 90 bp AGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAACCACCCACAGGGGTGTaGACAGAAATGAATGACTGT +
Preference number: 4 (lower is better)
Translates to: RPKPLVEKQGGDNTSDGKPPTGV*TEMNDC
Trigger: ACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG...TTTGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR TCA 90 bp CCACCCACAGGGGTGTGGACAGAAATGAATGACTGTGTGTGTCTGCAGCTTGGCGTGGACAGAAATGAATaGCTGTGTGTGTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PPTGVWTEMNDCVCLQLGVDRNE*LCVSAA
Trigger: AGCTGCAGACACACACAGTCATTCATTTCTGTCCAC...GCCAAGCTGCAGACACACACAGTCATTCATTTCTGTCCACACCCCTGTGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS CCA 90 bp GCGCTGGAGCGAGATCCGGCGGTGGACGACCGCGCGTGGACGTTCTaGCCACGGCCACTGCCACGGCGGAACGCGAGGCGCCGTCCCGCG +
Preference number: 5 (lower is better)
Translates to: ALERDPAVDDRAWTF*PRPLPRRNARRRPA
Trigger: CGCGGGACGGCGCCTCGCGTTCCGCCGTGGCAGTGGCCGTGGCCAGAACGTCCACGCGCGGTCGTCCACCGCCGGATCTCGCTCCAGCGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS GCA 90 bp ATCCGGCGGTGGACGACCGCGCGTGGACGTTCTGGCCACGGCCACTaGCACGGCGGAACGCGAGGCGCCGTCCCGCGGCAGAGAGTCCCC +
Preference number: 5 (lower is better)
Translates to: IRRWTTARGRSGHGH*HGGTRGAVPRQRVP
Trigger: GGGGACTCTCTGCCGCGGGACGGCGCCTCGCGTTCCGCCGTGGCAGTGGCCGTGGCCAGAACGTCCACGCGCGGTCGTCCACCGCCGGAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS CCA 90 bp GGACCACGGGCGCTGGAGCGAGATCCGGCGGTGGACGACCGCGCGTaGACGTTCTGGCCACGGCCACTGCCACGGCGGAACGCGAGGCGC +
Preference number: 5 (lower is better)
Translates to: GPRALERDPAVDDRA*TFWPRPLPRRNARR
Trigger: GCGCCTCGCGTTCCGCCGTGGCAGTGGCCGTGGCCAGAACGTCCACGCGCGGTCGTCCACCGCCGGATCTCGCTCCAGCGCCCGTGGTCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS GCA 90 bp GGACCACGGGCGCTCCGCTCTGCTCGGTTCTCCGCGCCGGTTCCCTaGGTCGCGGCCGGGAAGTTTCCGAAGCTCGGGCGGCGGGAAGCG +
Preference number: 5 (lower is better)
Translates to: GPRALRSARFSAPVP*VAAGKFPKLGRREA
Trigger: CGCTTCCCGCCGCCCGAGCTTCGGAAACTTCCCGGCCGCGACGCAGGGAACCGGCGCGGAGAACCGAGCAGAGCGGAGCGCCCGTGGTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370167.8
CDS GCA 90 bp CTCCCCCTACCCCTCCGCTCTGCTCGGTTCTCCGCGCCGGTTCCCTaGGTCGCGGCCGGGAAGTTTCCGAAGCTCGGGCGGCGGGAAGCG +
Preference number: 5 (lower is better)
Translates to: LPLPLRSARFSAPVP*VAAGKFPKLGRREA
Trigger: CGCTTCCCGCCGCCCGAGCTTCGGAAACTTCCCGGCCGCGACGCAGGGAACCGGCGCGGAGAACCGAGCAGAGCGGAGGGGTAGGGGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477033.1
CDS GCA 90 bp CAAGTTCGAGCTTCCGACTCTGGCTGGGGGTGTGCGTGCGAGGAGTaGCGTTCGAGGCCTAGATCTCCCCCAGGGCCAGGTGGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: QVRASDSGWGCACEE*RSRPRSPPGPGGPG
Trigger: CCCTGGCCCACCTGGCCCTGGGGGAGATCTAGGCCTCGAACGGCACTCCTCGCACGCACACCCCCAGCCAGAGTCGGAAGCTCGAACTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477033.1
CDS-3UTR CAA 90 bp AGGGGGAAGCGCAGGGAGGCGCAGGGCCTAGCCGAGCTGGCTGAGCACCCAGGGTCCTCCGGCGGTAGTTaGGCCACCCTCACTCACAAA +
Preference number: 5 (lower is better)
Translates to: RGKRREAQGLAELAEHPGSSGGS*ATLTHK
Trigger: TTTGTGAGTGAGGGTGGCCAAACTACCGCCGGAGGA...CCCTGGGTGCTCAGCCAGCTCGGCTAGGCCCTGCGCCTCCCTGCGCTTCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS CCA 90 bp GGATCTGGACAGGGAAGGATGCCCGCAGCCCCACTGGTGGGGGTGTaGCACCCTCCGAATCCAGGCCACAGCTCATGGAGTCGCGGTCAG +
Preference number: 5 (lower is better)
Translates to: GSGQGRMPAAPLVGV*HPPNPGHSSWSRGQ
Trigger: CTGACCGCGACTCCATGAGCTGTGGCCTGGATTCGGAGGGTGCCACACCCCCACCAGTGGGGCTGCGGGCATCCTTCCCTGTCCAGATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CAA 90 bp CCACTGGGATCCAGTGCAACGAGGTGGCACACACCCTTCCTGAAGGGGGAAGCGCTGCCCTCCCCTCCCTaGCCACACGAGTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PLGSSATRWHTPFLKGEALPSPP*PHEWAG
Trigger: CCCTGCCCACTCGTGTGGCAAGGGAGGGGAGGGCAG...CGCTTCCCCCTTCAGGAAGGGTGTGTGCCACCTCGTTGCACTGGATCCCAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CAA 90 bp CTCCGCAGCTCTCGCTCTGAGACCCCATCTCCTCCGGCGGTAGTTTGGCCACCCCCCGCCATAGGCACGTaGATTAGGACGGCAGCCCGC +
Preference number: 5 (lower is better)
Translates to: LRSSRSETPSPPAVVWPPPAIGT*IRTAAR
Trigger: GCGGGCTGCCGTCCTAATCAACGTGCCTATGGCGGG...GGGTGGCCAAACTACCGCCGGAGGAGATGGGGTCTCAGAGCGAGAGCTGCGGAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS CCA 90 bp CCACTGGTGGGGGTGTGGCACCCTCCGAATCCAGGCCACAGCTCATaGAGTCGCGGTCAGCCTCGGATTCCGCATCAGAGCAGTCGGAGC +
Preference number: 5 (lower is better)
Translates to: PLVGVWHPPNPGHSS*SRGQPRIPHQSSRS
Trigger: GCTCCGACTGCTCTGATGCGGAATCCGAGGCTGACCGCGACTCCATGAGCTGTGGCCTGGATTCGGAGGGTGCCACACCCCCACCAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CAA 90 bp AGAGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCAAAGAAGGAGGGCGGGTaGGAGGCCGCAGATGCCTGC +
Preference number: 5 (lower is better)
Translates to: RGPSPWWRNREVTTPVMAKKEGG*EAADAC
Trigger: GCAGGCATCTGCGGCCTCCAACCCGCCCTCCTTCTT...TGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CAA 90 bp CACAAGCACACACACGCACACCCGCCACCCACAGGGGTGTGGACAGAAATGAATAAGAAGGAGGGCGGGTaGGAGGCCGCAGATGCCTGC +
Preference number: 5 (lower is better)
Translates to: HKHTHAHPPPTGVWTEMNKKEGG*EAADAC
Trigger: GCAGGCATCTGCGGCCTCCAACCCGCCCTCCTTCTT...ATTCATTTCTGTCCACACCCCTGTGGGTGGCGGGTGTGCGTGTGTGTGCTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS-3UTR CAA 90 bp AGAGGCCCAAGCCCTTGGTGGAGAAACAGGGAGGTGACAACACCAGTGATGGCATCCTCCGGCGGTAGTTaGGCCACCCTCACTCACAAA +
Preference number: 5 (lower is better)
Translates to: RGPSPWWRNREVTTPVMASSGGS*ATLTHK
Trigger: TTTGTGAGTGAGGGTGGCCAAACTACCGCCGGAGGA...TGCCATCACTGGTGTTGTCACCTCCCTGTTTCTCCACCAAGGGCTTGGGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS GCA 72 bp TGGACGACCGCGCGTGGACGTTCTGGCCACGGCCACTaGCACGGCGGAACGCGAGGCGCCGTCCCGCGGCAG +
Preference number: 6 (lower is better)
Translates to: WTTARGRSGHGH*HGGTRGAVPRQ
Trigger: CTGCCGCGGGACGGCGCCTCGCGTTCCGCCGTGGCAGTGGCCGTGGCCAGAACGTCCACGCGCGGTCGTCCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS CCA 72 bp CGAGATCCGGCGGTGGACGACCGCGCGTGGACGTTCTaGCCACGGCCACTGCCACGGCGGAACGCGAGGCGC +
Preference number: 6 (lower is better)
Translates to: RDPAVDDRAWTF*PRPLPRRNARR
Trigger: GCGCCTCGCGTTCCGCCGTGGCAGTGGCCGTGGCCAGAACGTCCACGCGCGGTCGTCCACCGCCGGATCTCG
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS GCA 72 bp GCGCTCCGCTCTGCTCGGTTCTCCGCGCCGGTTCCCTaGGTCGCGGCCGGGAAGTTTCCGAAGCTCGGGCGG +
Preference number: 6 (lower is better)
Translates to: ALRSARFSAPVP*VAAGKFPKLGR
Trigger: CCGCCCGAGCTTCGGAAACTTCCCGGCCGCGACGCAGGGAACCGGCGCGGAGAACCGAGCAGAGCGGAGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370167.8
CDS GCA 72 bp CCCCTCCGCTCTGCTCGGTTCTCCGCGCCGGTTCCCTaGGTCGCGGCCGGGAAGTTTCCGAAGCTCGGGCGG +
Preference number: 6 (lower is better)
Translates to: PLRSARFSAPVP*VAAGKFPKLGR
Trigger: CCGCCCGAGCTTCGGAAACTTCCCGGCCGCGACGCAGGGAACCGGCGCGGAGAACCGAGCAGAGCGGAGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477033.1
CDS CCA 72 bp GCGCTGGAGCGAGATCCGGCGGTGGACGACCGCGCGTaGACGTTCTGGCCACGGCCACTGCCACGGCGGAAC +
Preference number: 6 (lower is better)
Translates to: ALERDPAVDDRA*TFWPRPLPRRN
Trigger: GTTCCGCCGTGGCAGTGGCCGTGGCCAGAACGTCCACGCGCGGTCGTCCACCGCCGGATCTCGCTCCAGCGC
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS CCA 72 bp ACGCTGGACCACGGGCGCTGGAGCGAGATCCGGCGGTaGACGACCGCGCGTGGACGTTCTGGCCACGGCCAC +
Preference number: 6 (lower is better)
Translates to: TLDHGRWSEIRR*TTARGRSGHGH
Trigger: GTGGCCGTGGCCAGAACGTCCACGCGCGGTCGTCCACCGCCGGATCTCGCTCCAGCGCCCGTGGTCCAGCGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342782.4
CDS GCA 72 bp GGAAGTTTCCGAAGCTCGGGCGGCGGGAAGCGCCACTaGTGCAGCCTAACGCCACCGGAACCCCGGGTGGCG +
Preference number: 6 (lower is better)
Translates to: GSFRSSGGGKRH*CSLTPPEPRVA
Trigger: CGCCACCCGGGGTTCCGGTGGCGTTAGGCTGCAGCAGTGGCGCTTCCCGCCGCCCGAGCTTCGGAAACTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477033.1
CDS GCA 72 bp GCCAGGTGGGCCAGGGGAACAGAGGAGGCGCCGAGGTaGTGGGCCTCAGCGAGTCCTCTCAGAGGTGGTCTG +
Preference number: 6 (lower is better)
Translates to: ARWARGTEEAPR*WASASPLRGGL
Trigger: CAGACCACCTCTGAGAGGACTCGCTGAGGCCCAGCACCTCGGCGCCTCCTCTGTTCCCCTGGCCCACCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477033.1
CDS GCA 72 bp GCTTCCGACTCTGGCTGGGGGTGTGCGTGCGAGGAGTaGCGTTCGAGGCCTAGATCTCCCCCAGGGCCAGGT +
Preference number: 6 (lower is better)
Translates to: ASDSGWGCACEE*RSRPRSPPGPG
Trigger: ACCTGGCCCTGGGGGAGATCTAGGCCTCGAACGGCACTCCTCGCACGCACACCCCCAGCCAGAGTCGGAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477033.1
CDS CCA 72 bp CCCAGACCCTCCATGGGCGATCGGCTCCCTACACGCTaGACCACGGGCGCCCCTTTCTGCTCCTGTCTCGGT +
Preference number: 6 (lower is better)
Translates to: PRPSMGDRLPTR*TTGAPFCSCLG
Trigger: ACCGAGACAGGAGCAGAAAGGGGCGCCCGTGGTCCAGCGTGTAGGGAGCCGATCGCCCATGGAGGGTCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477033.1
CDS TCA 72 bp GAGCCGGCACGGCCAGCAAGGCTGGTCTCACACAGGTaGGGGCACTCGGCCTGGAATCTGCTGAAGCCTCCC +
Preference number: 6 (lower is better)
Translates to: EPARPARLVSHR*GHSAWNLLKPP
Trigger: GGGAGGCTTCAGCAGATTCCAGGCCGAGTGCCCTCACCTGTGTGAGACCAGCCTTGCTGGCCGTGCCGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS CCA 72 bp CAGGGAAGGATGCCCGCAGCCCCACTGGTGGGGGTGTaGCACCCTCCGAATCCAGGCCACAGCTCATGGAGT +
Preference number: 6 (lower is better)
Translates to: QGRMPAAPLVGV*HPPNPGHSSWS
Trigger: ACTCCATGAGCTGTGGCCTGGATTCGGAGGGTGCCACACCCCCACCAGTGGGGCTGCGGGCATCCTTCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS CCA 72 bp CAGGATCTGGACAGGGAAGGATGCCCGCAGCCCCACTaGTGGGGGTGTGGCACCCTCCGAATCCAGGCCACA +
Preference number: 6 (lower is better)
Translates to: QDLDREGCPQPH*WGCGTLRIQAT
Trigger: TGTGGCCTGGATTCGGAGGGTGCCACACCCCCACCAGTGGGGCTGCGGGCATCCTTCCCTGTCCAGATCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS CCA 72 bp GGGGTGTGGCACCCTCCGAATCCAGGCCACAGCTCATaGAGTCGCGGTCAGCCTCGGATTCCGCATCAGAGC +
Preference number: 6 (lower is better)
Translates to: GVWHPPNPGHSS*SRGQPRIPHQS
Trigger: GCTCTGATGCGGAATCCGAGGCTGACCGCGACTCCATGAGCTGTGGCCTGGATTCGGAGGGTGCCACACCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS CCA 72 bp GTGACGGTGACAGAACGGCTGACCCCCGCCAAGCAGTaGACGAGCACCCCGCAGTTCTGGGACAAGGCCTCA +
Preference number: 6 (lower is better)
Translates to: VTVTERLTPAKQ*TSTPQFWDKAS
Trigger: TGAGGCCTTGTCCCAGAACTGCGGGGTGCTCGTCCACTGCTTGGCGGGGGTCAGCCGTTCTGTCACCGTCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8
CDS CCA 72 bp TCTCGCGAACGCTCCCCAAGTTCGAGCTTCCGACTCTaGCTGGGGGTGTGCGTGCGAGGAGTGCCGTTCGAG +
Preference number: 6 (lower is better)
Translates to: SRERSPSSSFRL*LGVCVRGVPFE
Trigger: CTCGAACGGCACTCCTCGCACGCACACCCCCAGCCAGAGTCGGAAGCTCGAACTTGGGGAGCGTTCGCGAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477033.1
CDS GCA 72 bp CAAGTTCGAGCTTCCGACTCTGGCTGGGGGTGTGCGTaGGAGGAGTGCCGTTCGAGGCCTAGATCTCCCCCA +
Preference number: 6 (lower is better)
Translates to: QVRASDSGWGCA*EECRSRPRSPP
Trigger: TGGGGGAGATCTAGGCCTCGAACGGCACTCCTCGCACGCACACCCCCAGCCAGAGTCGGAAGCTCGAACTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477033.1
CDS CCA 72 bp TGTAGCGGATGCCCAGTTTGGCCAGGCTCTCCAAATTaGCGGAATCCCGGGCACTGCCCAGATAGAGGTTGG +
Preference number: 6 (lower is better)
Translates to: CSGCPVWPGSPN*RNPGHCPDRGW
Trigger: CCAACCTCTATCTGGGCAGTGCCCGGGATTCCGCCAATTTGGAGAGCCTGGCCAAACTGGGCATCCGCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342782.4
ENST00000370167.8