RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DUSP7 (Homo sapiens)

Ensembl gene IDs: ENSG00000164086

Ensembl transcript IDs: ENST00000469623.1, ENST00000495880.2

Found 357 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCAAGAGCCGAGGCCTCTCCAGCAAGCCCTGCAGTGGGAGACCTTaGCTGCGGGCCCTGCCCCCAAGGATGGTGAGGGGCGCTCCGACA +
Preference number: 1 (lower is better)
Translates to: SKSRGLSSKPCSGRP*LRALPPRMVRGAPT
Trigger: TGTCGGAGCGCCCCTCACCATCCTTGGGGGCAGGGCCCGCAGGCAAGGTCTCCCACTGCAGGGCTTGCTGGAGAGGCCTCGGCTCTTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CCA 90 bp GCACAGGTGACATCTGGGGGTTCCTCAGGCCAGAGGTGGCGGGCTTaGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGG +
Preference number: 1 (lower is better)
Translates to: AQVTSGGSSGQRWRA*ALPPSPVESRAGAW
Trigger: CCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCCGCCACCTCTGGCCTGAGGAACCCCCAGATGTCACCTGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR GCA 90 bp GCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCAGCAAGCCCTaGAGTGGGAGACCTTGCCTGCGGGCCCTGCCCCCAAGGATGGTG +
Preference number: 1 (lower is better)
Translates to: AQSHVSKSRGLSSKP*SGRPCLRALPPRMV
Trigger: CACCATCCTTGGGGGCAGGGCCCGCAGGCAAGGTCTCCCACTGCAGGGCTTGCTGGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CCA 90 bp GGCCTCTGGGCACAGGTGACATCTGGGGGTTCCTCAGGCCAGAGGTaGCGGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCA +
Preference number: 1 (lower is better)
Translates to: GLWAQVTSGGSSGQR*RAWALPPSPVESRA
Trigger: TGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCCGCCACCTCTGGCCTGAGGAACCCCCAGATGTCACCTGTGCCCAGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CCA 90 bp CCAAGGATGGTGAGGGGCGCTCCGACACCGATCAGCCTGGGCCTCTaGGCACAGGTGACATCTGGGGGTTCCTCAGGCCAGAGGTGGCGG +
Preference number: 1 (lower is better)
Translates to: PRMVRGAPTPISLGL*AQVTSGGSSGQRWR
Trigger: CCGCCACCTCTGGCCTGAGGAACCCCCAGATGTCACCTGTGCCCAGAGGCCCAGGCTGATCGGTGTCGGAGCGCCCCTCACCATCCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CCA 90 bp AAGCCACGTGTCCAAGAGCCGAGGCCTCTCCAGCAAGCCCTGCAGTaGGAGACCTTGCCTGCGGGCCCTGCCCCCAAGGATGGTGAGGGG +
Preference number: 1 (lower is better)
Translates to: KPRVQEPRPLQQALQ*ETLPAGPAPKDGEG
Trigger: CCCCTCACCATCCTTGGGGGCAGGGCCCGCAGGCAAGGTCTCCCACTGCAGGGCTTGCTGGAGAGGCCTCGGCTCTTGGACACGTGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR TCA 90 bp GAGACTGCTCAGGCCCCAACAGGTAGAGGGGCCCAAGGGACTCGGTaGCTCACAGTAGGCCTGGGTACACCCACGGGCACACGCTGGCAC +
Preference number: 1 (lower is better)
Translates to: ETAQAPTGRGAQGTR*LTVGLGTPTGTRWH
Trigger: GTGCCAGCGTGTGCCCGTGGGTGTACCCAGGCCTACTGTGAGTCACCGAGTCCCTTGGGCCCCTCTACCTGTTGGGGCCTGAGCAGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR CCA 90 bp GGGCTGTCAGCAGAAAGGAGCGTCCTGGACAGGATGAGGCCCTGGTaGACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCAGCA +
Preference number: 1 (lower is better)
Translates to: GLSAERSVLDRMRPW*TPKATCPRAEASPA
Trigger: TGCTGGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATCCTGTCCAGGACGCTCCTTTCTGCTGACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CCA 90 bp GCTGGGCTGTCAGCAGAAAGGAGCGTCCTGGACAGGATGAGGCCCTaGTGGACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCA +
Preference number: 1 (lower is better)
Translates to: AGLSAERSVLDRMRP*WTPKATCPRAEASP
Trigger: TGGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATCCTGTCCAGGACGCTCCTTTCTGCTGACAGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR TCA 90 bp CCAAACTGGCTGGGCTGTCAGCAGAAAGGAGCGTCCTGGACAGGATaGGGCCCTGGTGGACGCCCAAAGCCACGTGTCCAAGAGCCGAGG +
Preference number: 1 (lower is better)
Translates to: PNWLGCQQKGASWTG*GPGGRPKPRVQEPR
Trigger: CCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATCCTGTCCAGGACGCTCCTTTCTGCTGACAGCCCAGCCAGTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR TCA 90 bp AGCCTCCAGCTGGCCAAGGAGAAAGCAGTGGGGACCCGAGTCTGCTaGGGCTGGGGATACAGGGACTCGAAGGGCACTAAGCCAGACAGC +
Preference number: 1 (lower is better)
Translates to: SLQLAKEKAVGTRVC*GWGYRDSKGTKPDS
Trigger: GCTGTCTGGCTTAGTGCCCTTCGAGTCCCTGTATCCCCAGCCTCAGCAGACTCGGGTCCCCACTGCTTTCTCCTTGGCCAGCTGGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR CCA 90 bp AGCGTTTACATTCATCCTGAGCCCTCGTGCCCCTTCCTTGCACCCTaGGCCAGGGGAGATGACCTGTGGTCTCAGCCTCCAGCTGGCCAA +
Preference number: 1 (lower is better)
Translates to: SVYIHPEPSCPFLAP*ARGDDLWSQPPAGQ
Trigger: TTGGCCAGCTGGAGGCTGAGACCACAGGTCATCTCCCCTGGCCCAGGGTGCAAGGAAGGGGCACGAGGGCTCAGGATGAATGTAAACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR TCA 90 bp GGCACTATGACAACCCCATCCTGGAGAGACACGTGTGCTGAGGCGTaGTGCGGAGCAAGTGAGACCCGTGGGAGGTCTGTGCGCTGTGAT +
Preference number: 1 (lower is better)
Translates to: GTMTTPSWRDTCAEA*CGASETRGRSVRCD
Trigger: ATCACAGCGCACAGACCTCCCACGGGTCTCACTTGCTCCGCATCACGCCTCAGCACACGTGTCTCTCCAGGATGGGGTTGTCATAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR CCA 90 bp CAACTTGCAGCAGTCATCACAGGCGAATGCAGAGCTAAGTCAGACTaGGCCAAGGGTGGGAGGCGGCACGACTGGGGGTCCCAATACCTG +
Preference number: 1 (lower is better)
Translates to: QLAAVITGECRAKSD*AKGGRRHDWGSQYL
Trigger: CAGGTATTGGGACCCCCAGTCGTGCCGCCTCCCACCCTTGGCCCAGTCTGACTTAGCTCTGCATTCGCCTGTGATGACTGCTGCAAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CCA 90 bp CCCCACCTTCTGCCTCAGGGAGGTCTGCAGGGACCACCAGAGGGATaGATGAGACGGCAGAAAATGCAAAGACCACCATCCAGCCCACCA +
Preference number: 1 (lower is better)
Translates to: PHLLPQGGLQGPPEG*MRRQKMQRPPSSPP
Trigger: TGGTGGGCTGGATGGTGGTCTTTGCATTTTCTGCCGTCTCATCCATCCCTCTGGTGGTCCCTGCAGACCTCCCTGAGGCAGAAGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR GCA 90 bp CATCCAGCCCACCAATCACAACTTGCAGCAGTCATCACAGGCGAATaGAGAGCTAAGTCAGACTGGGCCAAGGGTGGGAGGCGGCACGAC +
Preference number: 1 (lower is better)
Translates to: HPAHQSQLAAVITGE*RAKSDWAKGGRRHD
Trigger: GTCGTGCCGCCTCCCACCCTTGGCCCAGTCTGACTTAGCTCTGCATTCGCCTGTGATGACTGCTGCAAGTTGTGATTGGTGGGCTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CCA 90 bp TGCAGAGCTAAGTCAGACTGGGCCAAGGGTGGGAGGCGGCACGACTaGGGGTCCCAATACCTGAAGAGCAGTAAGCCACCCCTTCAAGAA +
Preference number: 1 (lower is better)
Translates to: CRAKSDWAKGGRRHD*GSQYLKSSKPPLQE
Trigger: TTCTTGAAGGGGTGGCTTACTGCTCTTCAGGTATTGGGACCCCCAGTCGTGCCGCCTCCCACCCTTGGCCCAGTCTGACTTAGCTCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR TCA 90 bp CCTTCCTCCCAGCCAGGCACCTACTTTTGGTTCCCAGTAAGCGGATaGGGCGGGGAAGCCTCCCACTTCCTGTTGTTAAAGCTAGCCCAG +
Preference number: 1 (lower is better)
Translates to: PSSQPGTYFWFPVSG*GGEASHFLLLKLAQ
Trigger: CTGGGCTAGCTTTAACAACAGGAAGTGGGAGGCTTCCCCGCCTCATCCGCTTACTGGGAACCAAAAGTAGGTGCCTGGCTGGGAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR GCA 90 bp TCTAAGCCAGGAAAACACAAGCTGGACAGCAGAGAGCCCATGACGTaGTGTCAGCTAGGGGGAGCTCAGGACTCAGGAGACTGCTCAGGC +
Preference number: 1 (lower is better)
Translates to: SKPGKHKLDSREPMT*CQLGGAQDSGDCSG
Trigger: GCCTGAGCAGTCTCCTGAGTCCTGAGCTCCCCCTAGCTGACAGCACGTCATGGGCTCTCTGCTGTCCAGCTTGTGTTTTCCTGGCTTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR TCA 90 bp ACCTTCTGCCTCAGGGAGGTCTGCAGGGACCACCAGAGGGATGGATaGGACGGCAGAAAATGCAAAGACCACCATCCAGCCCACCAATCA +
Preference number: 1 (lower is better)
Translates to: TFCLREVCRDHQRDG*DGRKCKDHHPAHQS
Trigger: TGATTGGTGGGCTGGATGGTGGTCTTTGCATTTTCTGCCGTCTCATCCATCCCTCTGGTGGTCCCTGCAGACCTCCCTGAGGCAGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR GCA 90 bp TGGCTAAGGCACTGGGGCAGGATCATCTGGCAAGGAGACAGACATTaGAGCTTCATGAGGAGCTGTGTGGTCAGACCTCGAGATTGGGGG +
Preference number: 1 (lower is better)
Translates to: WLRHWGRIIWQGDRH*SFMRSCVVRPRDWG
Trigger: CCCCCAATCTCGAGGTCTGACCACACAGCTCCTCATGAAGCTGCAATGTCTGTCTCCTTGCCAGATGATCCTGCCCCAGTGCCTTAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR GCA 90 bp GTGCTGAGGCGTGATGCGGAGCAAGTGAGACCCGTGGGAGGTCTGTaGGCTGTGATGTTTCAGCTTGCTAAGCCCGAAACAACATCTAAG +
Preference number: 1 (lower is better)
Translates to: VLRRDAEQVRPVGGL*AVMFQLAKPETTSK
Trigger: CTTAGATGTTGTTTCGGGCTTAGCAAGCTGAAACATCACAGCGCACAGACCTCCCACGGGTCTCACTTGCTCCGCATCACGCCTCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR GCA 90 bp ACTGAACAACTCAGTCCTGTAATCTCTCCTGGACCCCGGGGCAGCTaGCTCTCTGTGTGCCACAGCTGTGCCAGGGACATAGATTCACAA +
Preference number: 1 (lower is better)
Translates to: TEQLSPVISPGPRGS*LSVCHSCARDIDSQ
Trigger: TTGTGAATCTATGTCCCTGGCACAGCTGTGGCACACAGAGAGGCAGCTGCCCCGGGGTCCAGGAGAGATTACAGGACTGAGTTGTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR TCA 90 bp CCTTTCAGCCCTCTTAGGTCCACATTAAAGCCCAAAGAGGCACTATaGCAACCCCATCCTGGAGAGACACGTGTGCTGAGGCGTGATGCG +
Preference number: 1 (lower is better)
Translates to: PFSPLRSTLKPKEAL*QPHPGETRVLRRDA
Trigger: CGCATCACGCCTCAGCACACGTGTCTCTCCAGGATGGGGTTGTCATAGTGCCTCTTTGGGCTTTAATGTGGACCTAAGAGGGCTGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR TCA 90 bp GAGCCAGGCACACAGCTAGCACGCAATCAATGCCTTCCTACAAGATaGCATACGGGTTCACCCACTGTTCTTCGTTGCCTTTGTCCTGAC +
Preference number: 1 (lower is better)
Translates to: EPGTQLARNQCLPTR*HTGSPTVLRCLCPD
Trigger: GTCAGGACAAAGGCAACGAAGAACAGTGGGTGAACCCGTATGTCATCTTGTAGGAAGGCATTGATTGCGTGCTAGCTGTGTGCCTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR TCA 90 bp ACACCAGGATGTGAGGAACGCCTGGCCTCCAAACCCACCTCCAGGTaGTCCAAAGACAGTCTGTTTCTGCTGGCTTTATTTTTGGCCTTT +
Preference number: 1 (lower is better)
Translates to: TPGCEERLASKPTSR*SKDSLFLLALFLAF
Trigger: AAAGGCCAAAAATAAAGCCAGCAGAAACAGACTGTCTTTGGATCACCTGGAGGTGGGTTTGGAGGCCAGGCGTTCCTCACATCCTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR CCA 90 bp CTGAACATTTCTCTCTCTTGCAGGATCAGGAAAGGGATGAAATACTaGGTTATACAATCCACTGTTGCATGTAGCCTGAAAATAACACTT +
Preference number: 1 (lower is better)
Translates to: LNISLSCRIRKGMKY*VIQSTVACSLKITL
Trigger: AAGTGTTATTTTCAGGCTACATGCAACAGTGGATTGTATAACCCAGTATTTCATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CAA 90 bp GTCCAAGAGCCGAGGCCTCTCCAGCAAGCCCTGCAGTGGGAGACCTaGCCTGCGGGCCCTGCCCCCAAGGATGGTGAGGGGCGCTCCGAC +
Preference number: 2 (lower is better)
Translates to: VQEPRPLQQALQWET*PAGPAPKDGEGRSD
Trigger: GTCGGAGCGCCCCTCACCATCCTTGGGGGCAGGGCCCGCAGGCAAGGTCTCCCACTGCAGGGCTTGCTGGAGAGGCCTCGGCTCTTGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR CCA 90 bp GATGAGGCCCTGGTGGACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCTCCCACCTAGCCCTGTaGAGAGCCGAGCAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: DEALVDAQSHVSKSRGLSSHLAL*RAEQGP
Trigger: AGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGA...GGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR TCA 90 bp GCCCAGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAGTGATGCGGAGCAAGTaGGACCCGTGGGAGGTCTGT +
Preference number: 2 (lower is better)
Translates to: AQPSRHQNALHWTQPPSGVMRSK*DPWEVC
Trigger: ACAGACCTCCCACGGGTCTCACTTGCTCCGCATCAC...TCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR TCA 90 bp CTGGAAGGAAGTAGGTGGCCTGGCCCTGCATTTCGCTCTGCCATCTGCCCAGCTCTGGGCCAGGGGAGATaGCCTGTGGTCTCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: LEGSRWPGPAFRSAICPALGQGR*PVVSAS
Trigger: GGAGGCTGAGACCACAGGTCATCTCCCCTGGCCCAG...AGCTGGGCAGATGGCAGAGCGAAATGCAGGGCCAGGCCACCTACTTCCTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR GCA 90 bp ACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCCATCCTGAGCCCTCGTaGCCCTTCCTTGCACCCTGG +
Preference number: 2 (lower is better)
Translates to: TKTPSTGHSHHREKTARAHPEPS*PFLAPW
Trigger: CCAGGGTGCAAGGAAGGGGCACGAGGGCTCAGGATG...GGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR CCA 90 bp CTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCACCCCCACACCTTGCCCCAAGGAGAAAGCAGTaGGGACCCGAGTCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: LDTATIGKRQPGPPPHLAPRRKQ*GPESAE
Trigger: CTCAGCAGACTCGGGTCCCCACTGCTTTCTCCTTGG...GGCAAGGTGTGGGGGTGGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR TCA 90 bp GCCCAGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGACGTTTACATTCATCCTaGGCCCTCGTGCCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: AQPSRHQNALHWTQPPSGRLHSS*ALVPLP
Trigger: AGGAAGGGGCACGAGGGCTCAGGATGAATGTAAACG...TCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR GCA 90 bp GTCCATCCTTGCCCCACTTGCCCCCGCCCTAGGGTTGAAATGGGTGCAAGTCTCTGCCTCAGGGAGGTCTaGAGGGACCACCAGAGGGAT +
Preference number: 2 (lower is better)
Translates to: VHPCPTCPRPRVEMGASLCLREV*RDHQRD
Trigger: ATCCCTCTGGTGGTCCCTGCAGACCTCCCTGAGGCA...GAGACTTGCACCCATTTCAACCCTAGGGCGGGGGCAAGTGGGGCAAGGATGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR TCA 90 bp CAATACCTGAAGAGCAGTAAGCCACCCCTTCAAGAAGGGCCCGCTGAGGAAACATGCCCCCAAGGATGGTaGGGGGCGCTCCGACACCGA +
Preference number: 2 (lower is better)
Translates to: QYLKSSKPPLQEGPAEETCPQGW*GALRHR
Trigger: TCGGTGTCGGAGCGCCCCTCACCATCCTTGGGGGCA...TGTTTCCTCAGCGGGCCCTTCTTGAAGGGGTGGCTTACTGCTCTTCAGGTATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR GCA 90 bp GCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGACAGCCAGAGAGCCCATGACGTaGTGTCAGCTAGGGGGAGCT +
Preference number: 2 (lower is better)
Translates to: ADTKTPSTGHSHHREKTAREPMT*CQLGGA
Trigger: AGCTCCCCCTAGCTGACAGCACGTCATGGGCTCTCT...GGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR CCA 90 bp GGCGGGGAAGCCTCCCACTTCCTGTTGTTAAAGCTAGCCCAGCCCAGCCGACACTTTGGGGTGTGCCTCTaGCTCCAGGGCTACCTTTCA +
Preference number: 2 (lower is better)
Translates to: GGEASHFLLLKLAQPSRHFGVCL*LQGYLS
Trigger: TGAAAGGTAGCCCTGGAGCCAGAGGCACACCCCAAA...GTGTCGGCTGGGCTGGGCTAGCTTTAACAACAGGAAGTGGGAGGCTTCCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR CCA 90 bp CTGGAAGGAAGTAGGTGGCCTGGCCCTGCATTTCGCTCTGCCATCTGCCCAGCTCCTACCACAGCTGACTaGATGGGGCCAACCTTCCTG +
Preference number: 2 (lower is better)
Translates to: LEGSRWPGPAFRSAICPAPTTAD*MGPTFL
Trigger: CAGGAAGGTTGGCCCCATCCAGTCAGCTGTGGTAGG...AGCTGGGCAGATGGCAGAGCGAAATGCAGGGCCAGGCCACCTACTTCCTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR CAA 90 bp AGAGATAGAGCGTTTACATTCATCCTGAGCCCTCGTGCCCCTTCCTaGCACCCTGGGCCAGGGGAGATGACCTGTGGTCTCAGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: RDRAFTFILSPRAPS*HPGPGEMTCGLSLQ
Trigger: CTGGAGGCTGAGACCACAGGTCATCTCCCCTGGCCCAGGGTGCAAGGAAGGGGCACGAGGGCTCAGGATGAATGTAAACGCTCTATCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR TCA 90 bp CTGGAAGGAAGTAGGTGGCCTGGCCCTGCATTTCGCTCTGCCATCTGCCCAGCTCCCAAAGAGGCACTATaGCAACCCCATCCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: LEGSRWPGPAFRSAICPAPKEAL*QPHPGE
Trigger: CTCTCCAGGATGGGGTTGTCATAGTGCCTCTTTGGG...AGCTGGGCAGATGGCAGAGCGAAATGCAGGGCCAGGCCACCTACTTCCTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR TCA 90 bp GTCCATCCTTGCCCCACTTGCCCCCGCCCTAGGGTTGAAATGGGTGCAAGTCTCTCAAGAAGGGCCCGCTaGGGAAACAGAGGCTTCACA +
Preference number: 2 (lower is better)
Translates to: VHPCPTCPRPRVEMGASLSRRAR*GNRGFT
Trigger: TGTGAAGCCTCTGTTTCCTCAGCGGGCCCTTCTTGA...GAGACTTGCACCCATTTCAACCCTAGGGCGGGGGCAAGTGGGGCAAGGATGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR CCA 90 bp GGCGGGGAAGCCTCCCACTTCCTGTTGTTAAAGCTAGCCCAGCCCAGCCGACACATGACAACCCCATCCTaGAGAGACACGTGTGCTGAG +
Preference number: 2 (lower is better)
Translates to: GGEASHFLLLKLAQPSRHMTTPS*RDTCAE
Trigger: CTCAGCACACGTGTCTCTCCAGGATGGGGTTGTCAT...GTGTCGGCTGGGCTGGGCTAGCTTTAACAACAGGAAGTGGGAGGCTTCCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR CCA 90 bp TACCCAGACGGGGAGGAGCTTTCAGGAAGGATAAAGGTACCCACTAGCCAGGCCAGGGGAGATGACCTGTaGTCTCAGCCTCCAGCTGGC +
Preference number: 2 (lower is better)
Translates to: YPDGEELSGRIKVPTSQARGDDL*SQPPAG
Trigger: GCCAGCTGGAGGCTGAGACCACAGGTCATCTCCCCT...GGCCTGGCTAGTGGGTACCTTTATCCTTCCTGAAAGCTCCTCCCCGTCTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR TCA 90 bp AGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGCATCTGGAGGCTGACTaGGCTAGCAGTCACCACATT +
Preference number: 2 (lower is better)
Translates to: SPADTKTPSTGHSHHREKHLEAD*ASSHHI
Trigger: AATGTGGTGACTGCTAGCTCAGTCAGCCTCCAGATG...CTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR GCA 90 bp GGCGGGGAAGCCTCCCACTTCCTGTTGTTAAAGCTAGCCCAGCCCAGCCGACACCCACATTTCAATAGCTaGCTGTTTGGGGTGTGCCTC +
Preference number: 2 (lower is better)
Translates to: GGEASHFLLLKLAQPSRHPHFNS*LFGVCL
Trigger: GAGGCACACCCCAAACAGGCAGCTATTGAAATGTGG...GTGTCGGCTGGGCTGGGCTAGCTTTAACAACAGGAAGTGGGAGGCTTCCCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR GCA 90 bp TACCCAGACGGGGAGGAGCTTTCAGGAAGGATAAAGGTACCCACTAGCCAGGCCGCAAGCCCTACAGGCTaGAGAGAGCATCTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: YPDGEELSGRIKVPTSQAASPTG*REHLEA
Trigger: AGCCTCCAGATGCTCTCTGCAGCCTGTAGGGCTTGC...GGCCTGGCTAGTGGGTACCTTTATCCTTCCTGAAAGCTCCTCCCCGTCTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR CCA 90 bp GTCCATCCTTGCCCCACTTGCCCCCGCCCTAGGGTTGAAATGGGTGCAAGTCTCAACAGCCAAACTGGCTaGGCTGTCAGCAGAAAGGAG +
Preference number: 2 (lower is better)
Translates to: VHPCPTCPRPRVEMGASLNSQTG*AVSRKE
Trigger: CTCCTTTCTGCTGACAGCCCAGCCAGTTTGGCTGTT...GAGACTTGCACCCATTTCAACCCTAGGGCGGGGGCAAGTGGGGCAAGGATGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR TCA 90 bp AAGGCACTGGGGCAGGATCATCTGGCAAGGAGACAGACATTGCAGCTTCATGAGACGTGTGCTGAGGCGTaGTGCGGAGCAAGTGAGACC +
Preference number: 2 (lower is better)
Translates to: KALGQDHLARRQTLQLHETCAEA*CGASET
Trigger: GGTCTCACTTGCTCCGCATCACGCCTCAGCACACGT...CTCATGAAGCTGCAATGTCTGTCTCCTTGCCAGATGATCCTGCCCCAGTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR TCA 90 bp AAGGCACTGGGGCAGGATCATCTGGCAAGGAGACAGACATTGCAGCTTCATGAGGAGAGACACGTGTGCTaGGGCGTGATGCGGAGCAAG +
Preference number: 2 (lower is better)
Translates to: KALGQDHLARRQTLQLHEERHVC*GVMRSK
Trigger: CTTGCTCCGCATCACGCCTCAGCACACGTGTCTCTC...CTCATGAAGCTGCAATGTCTGTCTCCTTGCCAGATGATCCTGCCCCAGTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR TCA 90 bp CTGGAAGGAAGTAGGTGGCCTGGCCCTGCATTTCGCTCTGCCATCTGCCCAGCTATGGGGCTTCATAAGTaGGGTGTGCTTAAATGGGCC +
Preference number: 2 (lower is better)
Translates to: LEGSRWPGPAFRSAICPAMGLHK*GVLKWA
Trigger: GGCCCATTTAAGCACACCTCACTTATGAAGCCCCAT...AGCTGGGCAGATGGCAGAGCGAAATGCAGGGCCAGGCCACCTACTTCCTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR GCA 90 bp TACCCAGACGGGGAGGAGCTTTCAGGAAGGATAAAGGTACCCACTAGCCAGGCCGACAGCAGGACACACTaGTCTGGGGAAGGCCTTTCT +
Preference number: 2 (lower is better)
Translates to: YPDGEELSGRIKVPTSQADSRTH*SGEGLS
Trigger: AGAAAGGCCTTCCCCAGAGCAGTGTGTCCTGCTGTC...GGCCTGGCTAGTGGGTACCTTTATCCTTCCTGAAAGCTCCTCCCCGTCTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR GCA 90 bp CTCGACTGTGGCAAGATTTTAATCTGCTGCGCTAAAGAATCCCTGAAAGCCACCGTGGGAGACCTTGCCTaGGGGCCCTGCCCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: LDCGKILICCAKESLKATVGDLA*GPCPQG
Trigger: TCCTTGGGGGCAGGGCCCGCAGGCAAGGTCTCCCAC...GGTGGCTTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTTGCCACAGTCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CAA 90 bp ATGGCTAAGGCACTGGGGCAGGATCATCTGGCAAGGAGACAGACATaGCAGCTTCATGAGGAGCTGTGTGGTCAGACCTCGAGATTGGGG +
Preference number: 2 (lower is better)
Translates to: MAKALGQDHLARRQT*QLHEELCGQTSRLG
Trigger: CCCCAATCTCGAGGTCTGACCACACAGCTCCTCATGAAGCTGCAATGTCTGTCTCCTTGCCAGATGATCCTGCCCCAGTGCCTTAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR TCA 90 bp GGTCTGTGCGCTGTGATGTTTCAGCTTGCTAAGCCCGAAACAACATCTAAGCCAGCCCAAGGGACTCGGTaGCTCACAGTAGGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: GLCAVMFQLAKPETTSKPAQGTR*LTVGLG
Trigger: ACCCAGGCCTACTGTGAGTCACCGAGTCCCTTGGGC...TGGCTTAGATGTTGTTTCGGGCTTAGCAAGCTGAAACATCACAGCGCACAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR GCA 90 bp AAGGCACTGGGGCAGGATCATCTGGCAAGGAGACAGACATTGCAGCTTCATGAGCAGCCTGGCGAAGCCTaGTTCCCTCTCTCTATTCCC +
Preference number: 2 (lower is better)
Translates to: KALGQDHLARRQTLQLHEQPGEA*FPLSIP
Trigger: GGGAATAGAGAGAGGGAAGCAGGCTTCGCCAGGCTG...CTCATGAAGCTGCAATGTCTGTCTCCTTGCCAGATGATCCTGCCCCAGTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR GCA 90 bp TGGCCACCTTCTGGCATACCCTCATTTACACAAATCTGGTACATCTTTCTGGGTTGCAGTGGGAGACCTTaGCTGCGGGCCCTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: WPPSGIPSFTQIWYIFLGCSGRP*LRALPP
Trigger: TGGGGGCAGGGCCCGCAGGCAAGGTCTCCCACTGCA...ACCCAGAAAGATGTACCAGATTTGTGTAAATGAGGGTATGCCAGAAGGTGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR CCA 90 bp TACCCAGACGGGGAGGAGCTTTCAGGAAGGATAAAGGTACCCACTAGCCAGGCCATTCCCCTCCCTCGTTaGGGGAGTTCAAATGCTGAG +
Preference number: 2 (lower is better)
Translates to: YPDGEELSGRIKVPTSQAIPLPR*GSSNAE
Trigger: CTCAGCATTTGAACTCCCCCAACGAGGGAGGGGAAT...GGCCTGGCTAGTGGGTACCTTTATCCTTCCTGAAAGCTCCTCCCCGTCTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR TCA 90 bp CTCGACTGTGGCAAGATTTTAATCTGCTGCGCTAAAGAATCCCTGAAAGCCACCGCCTCTGGGCACAGGTaGCATCTGGGGGTTCCTCAG +
Preference number: 2 (lower is better)
Translates to: LDCGKILICCAKESLKATASGHR*HLGVPQ
Trigger: CTGAGGAACCCCCAGATGTCACCTGTGCCCAGAGGC...GGTGGCTTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTTGCCACAGTCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR GCA 90 bp GTCCATCCTTGCCCCACTTGCCCCCGCCCTAGGGTTGAAATGGGTGCAAGTCTCGAGGCTTCACACATGTaGAAAACGCATTTGGTCAAG +
Preference number: 2 (lower is better)
Translates to: VHPCPTCPRPRVEMGASLEASHM*KTHLVK
Trigger: CTTGACCAAATGCGTTTTGCACATGTGTGAAGCCTC...GAGACTTGCACCCATTTCAACCCTAGGGCGGGGGCAAGTGGGGCAAGGATGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR GCA 90 bp CTCGACTGTGGCAAGATTTTAATCTGCTGCGCTAAAGAATCCCTGAAAGCCACCAGGGTCCCCACCTTCTaGCTCAGGGAGGTCTGCAGG +
Preference number: 2 (lower is better)
Translates to: LDCGKILICCAKESLKATRVPTF*LREVCR
Trigger: CCTGCAGACCTCCCTGAGGCAGAAGGTGGGGACCCT...GGTGGCTTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTTGCCACAGTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR GCA 90 bp TGGCCACCTTCTGGCATACCCTCATTTACACAAATCTGGTACATCTTTCTGGGTCTGCTGGTCCATCCTTaGCCCACTTGCCCCCGCCCT +
Preference number: 2 (lower is better)
Translates to: WPPSGIPSFTQIWYIFLGLLVHP*PTCPRP
Trigger: AGGGCGGGGGCAAGTGGGGCAAGGATGGACCAGCAG...ACCCAGAAAGATGTACCAGATTTGTGTAAATGAGGGTATGCCAGAAGGTGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR CCA 90 bp TGCCACTTGCTAGACCTTCCTCAGGAGGCCCATGTGTCAGTGATATCTCCTACCCTTGCCACTGGAGGCTaGGCAGAAACATTGGGTCAC +
Preference number: 2 (lower is better)
Translates to: CHLLDLPQEAHVSVISPTLATGG*AETLGH
Trigger: GTGACCCAATGTTTCTGCCCAGCCTCCAGTGGCAAG...GGTAGGAGATATCACTGACACATGGGCCTCCTGAGGAAGGTCTAGCAAGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR TCA 90 bp TGCCACTTGCTAGACCTTCCTCAGGAGGCCCATGTGTCAGTGATATCTCCTACCGAGGTCTGTGCGCTGTaGTGTTTCAGCTTGCTAAGC +
Preference number: 2 (lower is better)
Translates to: CHLLDLPQEAHVSVISPTEVCAL*CFSLLS
Trigger: GCTTAGCAAGCTGAAACATCACAGCGCACAGACCTC...GGTAGGAGATATCACTGACACATGGGCCTCCTGAGGAAGGTCTAGCAAGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR CCA 90 bp AAGGCACTGGGGCAGGATCATCTGGCAAGGAGACAGACATTGCAGCTTCATGAGGCTGGGCAGAAACATTaGGTCACCAGGCTCAGAGAT +
Preference number: 2 (lower is better)
Translates to: KALGQDHLARRQTLQLHEAGQKH*VTRLRD
Trigger: ATCTCTGAGCCTGGTGACCCAATGTTTCTGCCCAGC...CTCATGAAGCTGCAATGTCTGTCTCCTTGCCAGATGATCCTGCCCCAGTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR CCA 90 bp CTCGACTGTGGCAAGATTTTAATCTGCTGCGCTAAAGAATCCCTGAAAGCCACCGGCACAGGTGACATCTaGGGGTTCCTCAGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: LDCGKILICCAKESLKATGTGDI*GFLRPE
Trigger: CTCTGGCCTGAGGAACCCCCAGATGTCACCTGTGCC...GGTGGCTTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTTGCCACAGTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CAA 90 bp ACGGCAGAAAATGCAAAGACCACCATCCAGCCCACCAATCACAACTaGCAGCAGTCATCACAGGCGAATGCAGAGCTAAGTCAGACTGGG +
Preference number: 2 (lower is better)
Translates to: TAENAKTTIQPTNHN*QQSSQANAELSQTG
Trigger: CCCAGTCTGACTTAGCTCTGCATTCGCCTGTGATGACTGCTGCAAGTTGTGATTGGTGGGCTGGATGGTGGTCTTTGCATTTTCTGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR GCA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCATCCCCCACCTTCTCTTaGACTCCTCCCTACACTCCA +
Preference number: 2 (lower is better)
Translates to: LRHMDWDDGHTITCDGASSPTFS*TPPYTP
Trigger: TGGAGTGTAGGGAGGAGTGCAAGAGAAGGTGGGGGA...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR TCA 90 bp AACATTTCTCTCTCTTGCAGGATCAGGAAAGGGATGAAATACTGGGTTATACAAGCGTCCTGGACAGGATaGGGCCCTGGTGGACGCCCA +
Preference number: 2 (lower is better)
Translates to: NISLSCRIRKGMKYWVIQASWTG*GPGGRP
Trigger: TGGGCGTCCACCAGGGCCTCATCCTGTCCAGGACGC...TTGTATAACCCAGTATTTCATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR TCA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCATGCCTTCCTACAAGATaGCATACGGGTTCACCCACT +
Preference number: 2 (lower is better)
Translates to: LRHMDWDDGHTITCDGASCLPTR*HTGSPT
Trigger: AGTGGGTGAACCCGTATGTCATCTTGTAGGAAGGCA...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR CCA 90 bp AACATTTCTCTCTCTTGCAGGATCAGGAAAGGGATGAAATACTGGGTTATACAATCCTCAGGCCAGAGGTaGCGGGCTTGGGCTCTCCCA +
Preference number: 2 (lower is better)
Translates to: NISLSCRIRKGMKYWVIQSSGQR*RAWALP
Trigger: TGGGAGAGCCCAAGCCCGCCACCTCTGGCCTGAGGA...TTGTATAACCCAGTATTTCATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR CCA 90 bp AACATTTCTCTCTCTTGCAGGATCAGGAAAGGGATGAAATACTGGGTTATACAAGACAGGATGAGGCCCTaGTGGACGCCCAAAGCCACG +
Preference number: 2 (lower is better)
Translates to: NISLSCRIRKGMKYWVIQDRMRP*WTPKAT
Trigger: CGTGGCTTTGGGCGTCCACCAGGGCCTCATCCTGTC...TTGTATAACCCAGTATTTCATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR CCA 90 bp AACATTTCTCTCTCTTGCAGGATCAGGAAAGGGATGAAATACTGGGTTATACAAAGGATGAGGCCCTGGTaGACGCCCAAAGCCACGTGT +
Preference number: 2 (lower is better)
Translates to: NISLSCRIRKGMKYWVIQRMRPW*TPKATC
Trigger: ACACGTGGCTTTGGGCGTCCACCAGGGCCTCATCCT...TTGTATAACCCAGTATTTCATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR CCA 90 bp CTCGACTGTGGCAAGATTTTAATCTGCTGCGCTAAAGAATCCCTGAAAGCCACCGTGCTCCAGGGAGCTTaGATTTACCTGCCAAAAGTA +
Preference number: 2 (lower is better)
Translates to: LDCGKILICCAKESLKATVLQGA*IYLPKV
Trigger: TACTTTTGGCAGGTAAATCCAAGCTCCCTGGAGCAC...GGTGGCTTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTTGCCACAGTCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR TCA 72 bp GGAGACCTTGCCTGCGGGCCCTGCCCCCAAGGATGGTaGGGGGCGCTCCGACACCGATCAGCCTGGGCCTCT +
Preference number: 3 (lower is better)
Translates to: GDLACGPCPQGW*GALRHRSAWAS
Trigger: AGAGGCCCAGGCTGATCGGTGTCGGAGCGCCCCTCACCATCCTTGGGGGCAGGGCCCGCAGGCAAGGTCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR GCA 72 bp CGAGGCCTCTCCAGCAAGCCCTGCAGTGGGAGACCTTaGCTGCGGGCCCTGCCCCCAAGGATGGTGAGGGGC +
Preference number: 3 (lower is better)
Translates to: RGLSSKPCSGRP*LRALPPRMVRG
Trigger: GCCCCTCACCATCCTTGGGGGCAGGGCCCGCAGGCAAGGTCTCCCACTGCAGGGCTTGCTGGAGAGGCCTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CCA 72 bp GCACAGGTGACATCTGGGGGTTCCTCAGGCCAGAGGTaGCGGGCTTGGGCTCTCCCACCTAGCCCTGTGGAG +
Preference number: 3 (lower is better)
Translates to: AQVTSGGSSGQR*RAWALPPSPVE
Trigger: CTCCACAGGGCTAGGTGGGAGAGCCCAAGCCCGCCACCTCTGGCCTGAGGAACCCCCAGATGTCACCTGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR TCA 72 bp CAGGCCCCAACAGGTAGAGGGGCCCAAGGGACTCGGTaGCTCACAGTAGGCCTGGGTACACCCACGGGCACA +
Preference number: 3 (lower is better)
Translates to: QAPTGRGAQGTR*LTVGLGTPTGT
Trigger: TGTGCCCGTGGGTGTACCCAGGCCTACTGTGAGTCACCGAGTCCCTTGGGCCCCTCTACCTGTTGGGGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR CCA 72 bp CTAGCCCAGCCCAGCCGACACCAAAACGCCCTCCACTaGACACAGCCACCATCGGGAAAAGACAGCCCGGGC +
Preference number: 3 (lower is better)
Translates to: LAQPSRHQNALH*TQPPSGKDSPG
Trigger: GCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCTGGGCTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR CCA 72 bp GCAGAAAGGAGCGTCCTGGACAGGATGAGGCCCTGGTaGACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCC +
Preference number: 3 (lower is better)
Translates to: AERSVLDRMRPW*TPKATCPRAEA
Trigger: GGCCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATCCTGTCCAGGACGCTCCTTTCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR TCA 72 bp GTGCTGGGACCAGCCTCCAGTGGTGACACCAGGATGTaGGGAACGCCTGGCCTCCAAACCCACCTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: VLGPASSGDTRM*GTPGLQTHLQV
Trigger: CACCTGGAGGTGGGTTTGGAGGCCAGGCGTTCCTCACATCCTGGTGTCACCACTGGAGGCTGGTCCCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR CCA 72 bp GCAGTCATCACAGGCGAATGCAGAGCTAAGTCAGACTaGGCCAAGGGTGGGAGGCGGCACGACTGGGGGTCC +
Preference number: 3 (lower is better)
Translates to: AVITGECRAKSD*AKGGRRHDWGS
Trigger: GGACCCCCAGTCGTGCCGCCTCCCACCCTTGGCCCAGTCTGACTTAGCTCTGCATTCGCCTGTGATGACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR TCA 72 bp CTGGGCTGTCAGCAGAAAGGAGCGTCCTGGACAGGATaGGGCCCTGGTGGACGCCCAAAGCCACGTGTCCAA +
Preference number: 3 (lower is better)
Translates to: LGCQQKGASWTG*GPGGRPKPRVQ
Trigger: TTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATCCTGTCCAGGACGCTCCTTTCTGCTGACAGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CCA 72 bp CCCTTCCTTGCACCCTGGGCCAGGGGAGATGACCTGTaGTCTCAGCCTCCAGCTGGCCAAGGAGAAAGCAGT +
Preference number: 3 (lower is better)
Translates to: PFLAPWARGDDL*SQPPAGQGESS
Trigger: ACTGCTTTCTCCTTGGCCAGCTGGAGGCTGAGACCACAGGTCATCTCCCCTGGCCCAGGGTGCAAGGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR CCA 72 bp TCAGCAGAAAGGAGCGTCCTGGACAGGATGAGGCCCTaGTGGACGCCCAAAGCCACGTGTCCAAGAGCCGAG +
Preference number: 3 (lower is better)
Translates to: SAERSVLDRMRP*WTPKATCPRAE
Trigger: CTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATCCTGTCCAGGACGCTCCTTTCTGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CCA 72 bp AAGTCAGACTGGGCCAAGGGTGGGAGGCGGCACGACTaGGGGTCCCAATACCTGAAGAGCAGTAAGCCACCC +
Preference number: 3 (lower is better)
Translates to: KSDWAKGGRRHD*GSQYLKSSKPP
Trigger: GGGTGGCTTACTGCTCTTCAGGTATTGGGACCCCCAGTCGTGCCGCCTCCCACCCTTGGCCCAGTCTGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR CAA 90 bp ACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCGGCTGGGCAGAAACATaGGGTCACCAGGCTCAGAGA +
Preference number: 3 (lower is better)
Translates to: TKTPSTGHSHHREKTARAGWAET*GHQAQR
Trigger: TCTCTGAGCCTGGTGACCCAATGTTTCTGCCCAGCC...GGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR CAA 90 bp AAGGCACTGGGGCAGGATCATCTGGCAAGGAGACAGACATTGCAGCTTCATGAGGCACCCCTAGCCCTCTaGACCCAGGGGGTGGTGGGC +
Preference number: 3 (lower is better)
Translates to: KALGQDHLARRQTLQLHEAPLAL*TQGVVG
Trigger: GCCCACCACCCCCTGGGTCAAGAGGGCTAGGGGTGC...CTCATGAAGCTGCAATGTCTGTCTCCTTGCCAGATGATCCTGCCCCAGTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR TCA 72 bp ACAACCCCATCCTGGAGAGACACGTGTGCTGAGGCGTaGTGCGGAGCAAGTGAGACCCGTGGGAGGTCTGTG +
Preference number: 3 (lower is better)
Translates to: TTPSWRDTCAEA*CGASETRGRSV
Trigger: CACAGACCTCCCACGGGTCTCACTTGCTCCGCATCACGCCTCAGCACACGTGTCTCTCCAGGATGGGGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR GCA 72 bp GACTCGAAGGGCACTAAGCCAGACAGCAGGACACACTaGTCTGGGGAAGGCCTTTCTCCACTCCCCCACCTT +
Preference number: 3 (lower is better)
Translates to: DSKGTKPDSRTH*SGEGLSPLPHL
Trigger: AAGGTGGGGGAGTGGAGAAAGGCCTTCCCCAGAGCAGTGTGTCCTGCTGTCTGGCTTAGTGCCCTTCGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR CAA 90 bp GACGGGGAGGAGCTTTCAGGAAGGATAAAGGTACCCACTAGCCAGGCCCAGCCTGCCTCCCACTTCCTGTaGTTAAAGCTAGCCCAGCCC +
Preference number: 3 (lower is better)
Translates to: DGEELSGRIKVPTSQAQPASHFL*LKLAQP
Trigger: GGGCTGGGCTAGCTTTAACAACAGGAAGTGGGAGGC...AGGCTGGGCCTGGCTAGTGGGTACCTTTATCCTTCCTGAAAGCTCCTCCCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR TCA 72 bp TCACCAGGCTCAGAGATAGAGCGTTTACATTCATCCTaGGCCCTCGTGCCCCTTCCTTGCACCCTGGGCCAG +
Preference number: 3 (lower is better)
Translates to: SPGSEIERLHSS*ALVPLPCTLGQ
Trigger: CTGGCCCAGGGTGCAAGGAAGGGGCACGAGGGCTCAGGATGAATGTAAACGCTCTATCTCTGAGCCTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR GCA 72 bp GGAAAACACAAGCTGGACAGCAGAGAGCCCATGACGTaGTGTCAGCTAGGGGGAGCTCAGGACTCAGGAGAC +
Preference number: 3 (lower is better)
Translates to: GKHKLDSREPMT*CQLGGAQDSGD
Trigger: GTCTCCTGAGTCCTGAGCTCCCCCTAGCTGACAGCACGTCATGGGCTCTCTGCTGTCCAGCTTGTGTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR TCA 72 bp CAGCCAGGCACCTACTTTTGGTTCCCAGTAAGCGGATaGGGCGGGGAAGCCTCCCACTTCCTGTTGTTAAAG +
Preference number: 3 (lower is better)
Translates to: QPGTYFWFPVSG*GGEASHFLLLK
Trigger: CTTTAACAACAGGAAGTGGGAGGCTTCCCCGCCTCATCCGCTTACTGGGAACCAAAAGTAGGTGCCTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR GCA 72 bp CACTGGGGCAGGATCATCTGGCAAGGAGACAGACATTaGAGCTTCATGAGGAGCTGTGTGGTCAGACCTCGA +
Preference number: 3 (lower is better)
Translates to: HWGRIIWQGDRH*SFMRSCVVRPR
Trigger: TCGAGGTCTGACCACACAGCTCCTCATGAAGCTGCAATGTCTGTCTCCTTGCCAGATGATCCTGCCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR GCA 72 bp TTCATAAGTGAGGTGTGCTTAAATGGGCCCCACCCCTaGCACTTGCTAGACCTTCCTCAGGAGGCCCATGTG +
Preference number: 3 (lower is better)
Translates to: FISEVCLNGPHP*HLLDLPQEAHV
Trigger: CACATGGGCCTCCTGAGGAAGGTCTAGCAAGTGGCAGGGGTGGGGCCCATTTAAGCACACCTCACTTATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR GCA 72 bp CACCAATCACAACTTGCAGCAGTCATCACAGGCGAATaGAGAGCTAAGTCAGACTGGGCCAAGGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: HQSQLAAVITGE*RAKSDWAKGGR
Trigger: CCTCCCACCCTTGGCCCAGTCTGACTTAGCTCTGCATTCGCCTGTGATGACTGCTGCAAGTTGTGATTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR-3UTR CAA 90 bp TGCCACTTGCTAGACCTTCCTCAGGAGGCCCATGTGTCAGTGATATCTCCTACCGCCAGGCACCTACTTTaGGTTCCCAGTAAGCGGATG +
Preference number: 3 (lower is better)
Translates to: CHLLDLPQEAHVSVISPTARHLL*VPSKRM
Trigger: CATCCGCTTACTGGGAACCAAAAGTAGGTGCCTGGC...GGTAGGAGATATCACTGACACATGGGCCTCCTGAGGAAGGTCTAGCAAGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR TCA 72 bp GGATCATCTGGCAAGGAGACAGACATTGCAGCTTCATaGGGAGCTGTGTGGTCAGACCTCGAGATTGGGGGT +
Preference number: 3 (lower is better)
Translates to: GSSGKETDIAAS*GAVWSDLEIGG
Trigger: ACCCCCAATCTCGAGGTCTGACCACACAGCTCCTCATGAAGCTGCAATGTCTGTCTCCTTGCCAGATGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR TCA 72 bp CCTCTTAGGTCCACATTAAAGCCCAAAGAGGCACTATaGCAACCCCATCCTGGAGAGACACGTGTGCTGAGG +
Preference number: 3 (lower is better)
Translates to: PLRSTLKPKEAL*QPHPGETRVLR
Trigger: CCTCAGCACACGTGTCTCTCCAGGATGGGGTTGTCATAGTGCCTCTTTGGGCTTTAATGTGGACCTAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR GCA 72 bp GAAGGGCCCGCTGAGGAAACAGAGGCTTCACACATGTaGAAAACGCATTTGGTCAAGGTCAACATGGCGTCT +
Preference number: 3 (lower is better)
Translates to: EGPAEETEASHM*KTHLVKVNMAS
Trigger: AGACGCCATGTTGACCTTGACCAAATGCGTTTTGCACATGTGTGAAGCCTCTGTTTCCTCAGCGGGCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR TCA 72 bp ACACAGCTAGCACGCAATCAATGCCTTCCTACAAGATaGCATACGGGTTCACCCACTGTTCTTCGTTGCCTT +
Preference number: 3 (lower is better)
Translates to: TQLARNQCLPTR*HTGSPTVLRCL
Trigger: AAGGCAACGAAGAACAGTGGGTGAACCCGTATGTCATCTTGTAGGAAGGCATTGATTGCGTGCTAGCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR CAA 90 bp TGCCACTTGCTAGACCTTCCTCAGGAGGCCCATGTGTCAGTGATATCTCCTACCCCTCAATTCCTTCACTaGTCAAATGAGGAAAAAGGT +
Preference number: 3 (lower is better)
Translates to: CHLLDLPQEAHVSVISPTPQFLH*SNEEKG
Trigger: ACCTTTTTCCTCATTTGACAAGTGAAGGAATTGAGG...GGTAGGAGATATCACTGACACATGGGCCTCCTGAGGAAGGTCTAGCAAGTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR GCA 72 bp AACCCACCTCCAGGTGATCCAAAGACAGTCTGTTTCTaGTGGCTTTATTTTTGGCCTTTTCAGGGTGTAGCT +
Preference number: 3 (lower is better)
Translates to: NPPPGDPKTVCF*WLYFWPFQGVA
Trigger: AGCTACACCCTGAAAAGGCCAAAAATAAAGCCAGCAGAAACAGACTGTCTTTGGATCACCTGGAGGTGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469623.1
3UTR-3UTR CAA 90 bp TGGCCACCTTCTGGCATACCCTCATTTACACAAATCTGGTACATCTTTCTGGGTGAACATTTCTCTCTCTaGCAGGATCAGGAAAGGGAT +
Preference number: 3 (lower is better)
Translates to: WPPSGIPSFTQIWYIFLGEHFSL*QDQERD
Trigger: ATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTTC...ACCCAGAAAGATGTACCAGATTTGTGTAAATGAGGGTATGCCAGAAGGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CCA 72 bp TCTCTCTCTTGCAGGATCAGGAAAGGGATGAAATACTaGGTTATACAATCCACTGTTGCATGTAGCCTGAAA +
Preference number: 3 (lower is better)
Translates to: SLSCRIRKGMKY*VIQSTVACSLK
Trigger: TTTCAGGCTACATGCAACAGTGGATTGTATAACCCAGTATTTCATCCCTTTCCTGATCCTGCAAGAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCATGCCCCCCATGTGCGCCCGCGCTaGGGGGCCGCGGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: ALPPSPVESRAGAWCHAPHVRPR*GAAELV
Trigger: AACCAGCTCCGCGGCCCCCCAGCGCGGGCGCACATG...GGGGGCATGGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGC
73% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp GCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCATGCCCCCTGCCCCCAAGGATGGTaGGGGGCGCTCCGACACCGA +
Preference number: 4 (lower is better)
Translates to: ALPPSPVESRAGAWCHAPCPQGW*GALRHR
Trigger: TCGGTGTCGGAGCGCCCCTCACCATCCTTGGGGGCA...GGGGGCATGGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp CCTTGCCTGCGGGCCCTGCCCCCAAGGATGGTGAGGGGCGCTCCGACACCGATCGCGTCCTGGACAGGATaGGGCCCTGGTGGACGCCCA +
Preference number: 4 (lower is better)
Translates to: PCLRALPPRMVRGAPTPIASWTG*GPGGRP
Trigger: TGGGCGTCCACCAGGGCCTCATCCTGTCCAGGACGC...GATCGGTGTCGGAGCGCCCCTCACCATCCTTGGGGGCAGGGCCCGCAGGCAAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCCCGCCTTGCAGCGCGTaGCGAAGCGCTCCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: GLGLSHLALWRAEQGPGAPPCSA*RSAPCR
Trigger: CCGACAAGGAGCGCTTCGCCACGCGCTGCAAGGCGG...GGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CAA 72 bp CCGAGGCCTCTCCAGCAAGCCCTGCAGTGGGAGACCTaGCCTGCGGGCCCTGCCCCCAAGGATGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PRPLQQALQWET*PAGPAPKDGEG
Trigger: CCCCTCACCATCCTTGGGGGCAGGGCCCGCAGGCAAGGTCTCCCACTGCAGGGCTTGCTGGAGAGGCCTCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp GGCCAGAGGTGGCGGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCATGCAGTGGGAGACCTTaGCTGCGGGCCCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GQRWRAWALPPSPVESRACSGRP*LRALPP
Trigger: TGGGGGCAGGGCCCGCAGGCAAGGTCTCCCACTGCA...TGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCCGCCACCTCTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GATGAGGCCCTGGTGGACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCCGCTCTTGCAGGGCATaGCCCCTGCCCCCGTCGCCG +
Preference number: 4 (lower is better)
Translates to: DEALVDAQSHVSKSRGLSRSCRA*PLPPSP
Trigger: CGGCGACGGGGGCAGGGGCCATGCCCTGCAAGAGCG...GGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCATGCCCCCCAGCAAGCCCTGCAGTaGGAGACCTTGCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: ALPPSPVESRAGAWCHAPQQALQ*ETLPAG
Trigger: GCCCGCAGGCAAGGTCTCCCACTGCAGGGCTTGCTG...GGGGGCATGGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp GGCCAGAGGTGGCGGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCACGGCGTGGTTGGGGATaGTGGAGCGGATGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GQRWRAWALPPSPVESRARRGWG*WSGWAG
Trigger: ACCTGCCCATCCGCTCCATCATCCCCAACCACGCCG...TGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCCGCCACCTCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp GGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCGCCTCTGGGCACAGGTaGCATCTGGGGGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLGLSHLALWRAEQGPGAASGHR*HLGVPQ
Trigger: CTGAGGAACCCCCAGATGTCACCTGTGCCCAGAGGC...GGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp GATGAGGCCCTGGTGGACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCGCCACTCGGCGCTCTTaGAGGGCATGGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: DEALVDAQSHVSKSRGLSATRRS*RAWPLP
Trigger: GGGCAGGGGCCATGCCCTGCAAGAGCGCCGAGTGGC...GGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCATGCCCCCTGCCGTCTGACTCGGTaGCACTGCTGGGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: ALPPSPVESRAGAWCHAPCRLTR*HCWAAL
Trigger: GAGAGCTGCCCAGCAGTGCCACCGAGTCAGACGGCA...GGGGGCATGGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GGCCAGAGGTGGCGGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGCTAATGCTACTGCCTaGCAGCCCCCTGCGGCCCAC +
Preference number: 4 (lower is better)
Translates to: GQRWRAWALPPSPVESRAANATA*QPPAAH
Trigger: GTGGGCCGCAGGGGGCTGCCAGGCAGTAGCATTAGC...TGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCCGCCACCTCTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCATGCCCCCAGGGGACAAGGGGGCTaGGAGTGGCCAGACCAAAGC +
Preference number: 4 (lower is better)
Translates to: ALPPSPVESRAGAWCHAPRGQGG*EWPDQS
Trigger: GCTTTGGTCTGGCCACTCCCAGCCCCCTTGTCCCCT...GGGGGCATGGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp GCCCAGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAGCGGATGGGCAGGTTaGCCTTGCGCAGGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: AQPSRHQNALHWTQPPSGSGWAG*PCAGGA
Trigger: TGCGCCGCCTGCGCAAGGGCAACCTGCCCATCCGCT...TCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp GCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCATGCCCCCCATCCTTGCCCCACTTaGCCCCGCCCTAGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: ALPPSPVESRAGAWCHAPHPCPT*PRPRVE
Trigger: TTCAACCCTAGGGCGGGGGCAAGTGGGGCAAGGATG...GGGGGCATGGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GGCCAGAGGTGGCGGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGAAGGCTGGTTGGCTaGATGGCACAGGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: GQRWRAWALPPSPVESRAGRLVG*MAQGCR
Trigger: ACGGCAGCCCTGTGCCATCCAGCCAACCAGCCTTCC...TGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCCGCCACCTCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCATGCCCCCACAGGGAAGGCTGGTTaGCTGGATGGCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ALPPSPVESRAGAWCHAPTGKAG*LDGTGL
Trigger: CAGCCCTGTGCCATCCAGCCAACCAGCCTTCCCTGT...GGGGGCATGGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp GCCCAGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGACTGACTCGGTGGCACTaGTGGGCAGCTCTCGGTCCG +
Preference number: 4 (lower is better)
Translates to: AQPSRHQNALHWTQPPSGLTRWH*WAALGP
Trigger: CGGACCGAGAGCTGCCCAGCAGTGCCACCGAGTCAG...TCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp GATGAGGCCCTGGTGGACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCGGTTGTCGCACGGGCTaGTTAGCCCCAGCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: DEALVDAQSHVSKSRGLSGCRTG*LAPASA
Trigger: AGCGGACGCTGGGGCTAAGCAGCCCGTGCGACAACC...GGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp GGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCCACTCACATGCTGAGTaGTGCTCCGTCAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: GLGLSHLALWRAEQGPGAHSHAE*CSVRDP
Trigger: AGGGTCCCTGACGGAGCAGCACTCAGCATGTGAGTG...GGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp CTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCACCCCCACACCTTGCCTTCCCAGTAAGCGGATaGGGCGGGGAAGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LDTATIGKRQPGPPPHLAFPVSG*GGEASH
Trigger: GTGGGAGGCTTCCCCGCCTCATCCGCTTACTGGGAA...GGCAAGGTGTGGGGGTGGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp GCCCAGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGACAGCCATGGGGTCCTTaGTGTCCCCACCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: AQPSRHQNALHWTQPPSGQPWGP*CPHHPD
Trigger: GTCAGGGTGGTGGGGACATCAAGGACCCCATGGCTG...TCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp GCCAGGGGAGATGACCTGTGGTCTCAGCCTCCAGCTGGCCAAGGAGAAAGCAGTGCACGGTGGCCGCCTTaGAGCGCGTGGCGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: ARGDDLWSQPPAGQGESSARWPP*SAWRSA
Trigger: AGCGCTTCGCCACGCGCTGCAAGGCGGCCACCGTGC...ACTGCTTTCTCCTTGGCCAGCTGGAGGCTGAGACCACAGGTCATCTCCCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp GCCCAGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAGGTGGGTGGCGAGCTaGTCGGCGAGGAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: AQPSRHQNALHWTQPPSGRWVAS*SARKSC
Trigger: ACAGCTCTTCCTCGCCGAGCAGCTCGCCACCCACCT...TCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp GATGAGGCCCTGGTGGACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCAGGTGGGTGGCGAGCTaGTCGGCGAGGAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: DEALVDAQSHVSKSRGLSRWVAS*SARKSC
Trigger: ACAGCTCTTCCTCGCCGAGCAGCTCGCCACCCACCT...GGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GCCCAGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAGGAAGGCTGGTTGGCTaGATGGCACAGGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: AQPSRHQNALHWTQPPSGGRLVG*MAQGCR
Trigger: ACGGCAGCCCTGTGCCATCCAGCCAACCAGCCTTCC...TCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp GATGAGGCCCTGGTGGACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCGGCCTTCTTAGGGGCTaGCCCCAGAGGGCTAATGCT +
Preference number: 4 (lower is better)
Translates to: DEALVDAQSHVSKSRGLSGLLRG*PQRANA
Trigger: AGCATTAGCCCTCTGGGGTCAGCCCCTAAGAAGGCC...GGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp ACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCAGCAAGCCCTGCAGTGGTGAACTCGCCGCCGTaGTCGAAGGCGTTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: TPKATCPRAEASPASPAVVNSPP*SKALGR
Trigger: CCTACCCAACGCCTTCGAGCACGGCGGCGAGTTCAC...CACTGCAGGGCTTGCTGGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp GGCGGGGAAGCCTCCCACTTCCTGTTGTTAAAGCTAGCCCAGCCCAGCCGACACGCCACCCCCACACCTTaGCACTGGAGGCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GGEASHFLLLKLAQPSRHATPTP*HWRLGR
Trigger: TCTGCCCAGCCTCCAGTGGCAAGGTGTGGGGGTGGC...GTGTCGGCTGGGCTGGGCTAGCTTTAACAACAGGAAGTGGGAGGCTTCCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp GATGAGGCCCTGGTGGACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCTGCCTCAGGGAGGTCTaGAGGGACCACCAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: DEALVDAQSHVSKSRGLSCLREV*RDHQRD
Trigger: ATCCCTCTGGTGGTCCCTGCAGACCTCCCTGAGGCA...GGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp ACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCAGCAAGCCCTGCAGTGAGGGTCCCCACCTTCTaGCTCAGGGAGGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TPKATCPRAEASPASPAVRVPTF*LREVCR
Trigger: CCTGCAGACCTCCCTGAGGCAGAAGGTGGGGACCCT...CACTGCAGGGCTTGCTGGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp CCTTGCCTGCGGGCCCTGCCCCCAAGGATGGTGAGGGGCGCTCCGACACCGATCAACAGCCAAACTGGCTaGGCTGTCAGCAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: PCLRALPPRMVRGAPTPINSQTG*AVSRKE
Trigger: CTCCTTTCTGCTGACAGCCCAGCCAGTTTGGCTGTT...GATCGGTGTCGGAGCGCCCCTCACCATCCTTGGGGGCAGGGCCCGCAGGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp ACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCAGCAAGCCCTGCAGTGGGGAGGCGGCACGACTaGGGGTCCCAATACCTGAAG +
Preference number: 4 (lower is better)
Translates to: TPKATCPRAEASPASPAVGRRHD*GSQYLK
Trigger: CTTCAGGTATTGGGACCCCCAGTCGTGCCGCCTCCC...CACTGCAGGGCTTGCTGGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp GCCAGGGGAGATGACCTGTGGTCTCAGCCTCCAGCTGGCCAAGGAGAAAGCAGTCGGCGTGGTTGGGGATaGTGGAGCGGATGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ARGDDLWSQPPAGQGESSRRGWG*WSGWAG
Trigger: ACCTGCCCATCCGCTCCATCATCCCCAACCACGCCG...ACTGCTTTCTCCTTGGCCAGCTGGAGGCTGAGACCACAGGTCATCTCCCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp GCCCAGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGACTGATCCTGTCCCACTaGCTCCTAAGGGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: AQPSRHQNALHWTQPPSGLILSH*LLRDAW
Trigger: CCAGGCATCCCTTAGGAGTCAGTGGGACAGGATCAG...TCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp GGCCAGAGGTGGCGGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCATGGACTCCAGCGTATTaGGTGGGAACAGGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GQRWRAWALPPSPVESRAWTPAY*VGTGCG
Trigger: ACCACAACCTGTTCCCACTCAATACGCTGGAGTCCA...TGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCCGCCACCTCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp ACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCAGCAAGCCCTGCAGTGGGGGGTCCCAATACCTaGAGAGCAGTAAGCCACCCC +
Preference number: 4 (lower is better)
Translates to: TPKATCPRAEASPASPAVGGPNT*RAVSHP
Trigger: GGGGTGGCTTACTGCTCTTCAGGTATTGGGACCCCC...CACTGCAGGGCTTGCTGGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp AGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGGACTCGAAGAGCTCGTaGGGCCGGCAGTCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPADTKTPSTGHSHHREKDSKSS*GRQSSS
Trigger: GCTGCTCGACTGCCGGCCGCACGAGCTCTTCGAGTC...CTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp GTCCATCCTTGCCCCACTTGCCCCCGCCCTAGGGTTGAAATGGGTGCAAGTCTCGACTCGAAGAGCTCGTaGGGCCGGCAGTCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VHPCPTCPRPRVEMGASLDSKSS*GRQSSS
Trigger: GCTGCTCGACTGCCGGCCGCACGAGCTCTTCGAGTC...GAGACTTGCACCCATTTCAACCCTAGGGCGGGGGCAAGTGGGGCAAGGATGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp GCCCAGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGACGCCACCCAGAGTCCTaGATACACCTTGATGCACCC +
Preference number: 4 (lower is better)
Translates to: AQPSRHQNALHWTQPPSGRHPES*IHLDAP
Trigger: GGGTGCATCAAGGTGTATGCAGGACTCTGGGTGGCG...TCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp CTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCACCCCCACACCTTGCCCAGCCTGGCGAAGCCTaGTTCCCTCTCTCTATTCCC +
Preference number: 4 (lower is better)
Translates to: LDTATIGKRQPGPPPHLAQPGEA*FPLSIP
Trigger: GGGAATAGAGAGAGGGAAGCAGGCTTCGCCAGGCTG...GGCAAGGTGTGGGGGTGGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp GTCCATCCTTGCCCCACTTGCCCCCGCCCTAGGGTTGAAATGGGTGCAAGTCTCCCTGACTCCTCTGCCTaGCCCAGGCCCCCATGCAGT +
Preference number: 4 (lower is better)
Translates to: VHPCPTCPRPRVEMGASLPDSSA*PRPPCS
Trigger: ACTGCATGGGGGCCTGGGGCAGGCAGAGGAGTCAGG...GAGACTTGCACCCATTTCAACCCTAGGGCGGGGGCAAGTGGGGCAAGGATGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGACAGCCGCTGCCACTCGGCCGTaGCCTCGTCGTAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ADTKTPSTGHSHHREKTAAATRP*PRRRAA
Trigger: TGCTGCTCTACGACGAGGCCACGGCCGAGTGGCAGC...GGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp ACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCACTCGGTGGCACTGCTaGGCAGCTCTCGGTCCGACT +
Preference number: 4 (lower is better)
Translates to: TKTPSTGHSHHREKTARATRWHC*AALGPT
Trigger: AGTCGGACCGAGAGCTGCCCAGCAGTGCCACCGAGT...GGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp ACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCCGAGCACGTCCAGGTTaGTGGAGTCCTTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: TKTPSTGHSHHREKTARARARPG*WSPWRS
Trigger: GCTGCGCCAAGGACTCCACCAACCTGGACGTGCTCG...GGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp CTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCACCCCCACACCTTGCCCAAAACGCCCTCCACTaGACACAGCCACCATCGGGA +
Preference number: 4 (lower is better)
Translates to: LDTATIGKRQPGPPPHLAQNALH*TQPPSG
Trigger: TCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTG...GGCAAGGTGTGGGGGTGGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp CTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCACCCCCACACCTTGCCGATGTGAGGAACGCCTaGCCTCCAAACCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LDTATIGKRQPGPPPHLADVRNA*PPNPPP
Trigger: TGGAGGTGGGTTTGGAGGCCAGGCGTTCCTCACATC...GGCAAGGTGTGGGGGTGGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp GCCCAGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGACCTACCACAGCTGACTaGATGGGGCCAACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: AQPSRHQNALHWTQPPSGPTTAD*MGPTFL
Trigger: CAGGAAGGTTGGCCCCATCCAGTCAGCTGTGGTAGG...TCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp GCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCATGCCCCCGGAACAGGTTGTGGTTaGTGGGCGTGGAAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: ALPPSPVESRAGAWCHAPGTGCG*WAWKSR
Trigger: TCTACTTTTCCACGCCCACCAACCACAACCTGTTCC...GGGGGCATGGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GTCCATCCTTGCCCCACTTGCCCCCGCCCTAGGGTTGAAATGGGTGCAAGTCTCTCCTCAGGCCAGAGGTaGCGGGCTTGGGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VHPCPTCPRPRVEMGASLSSGQR*RAWALP
Trigger: TGGGAGAGCCCAAGCCCGCCACCTCTGGCCTGAGGA...GAGACTTGCACCCATTTCAACCCTAGGGCGGGGGCAAGTGGGGCAAGGATGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GATGAGGCCCTGGTGGACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCCGTGGCTTCGTTCTGTaGAGGCAGGGGGAAGTGAAC +
Preference number: 4 (lower is better)
Translates to: DEALVDAQSHVSKSRGLSRGFVL*RQGEVN
Trigger: GTTCACTTCCCCCTGCCTCCACAGAACGAAGCCACG...GGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp GCCCAGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGACCCAAAGAGGCACTATaGCAACCCCATCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: AQPSRHQNALHWTQPPSGPKEAL*QPHPGE
Trigger: CTCTCCAGGATGGGGTTGTCATAGTGCCTCTTTGGG...TCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp GACGGGGAGGAGCTTTCAGGAAGGATAAAGGTACCCACTAGCCAGGCCCAGCCTCTGGGCCAGGGGAGATaGCCTGTGGTCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: DGEELSGRIKVPTSQAQPLGQGR*PVVSAS
Trigger: GGAGGCTGAGACCACAGGTCATCTCCCCTGGCCCAG...AGGCTGGGCCTGGCTAGTGGGTACCTTTATCCTTCCTGAAAGCTCCTCCCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp GGCCAGAGGTGGCGGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAAGTCGTAGGCGTCGTTaGGTGACAGGTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GQRWRAWALPPSPVESRASRRRR*VTGSSS
Trigger: AGAAGATGAACCTGTCACTCAACGACGCCTACGACT...TGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCCGCCACCTCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp GCCAGGGGAGATGACCTGTGGTCTCAGCCTCCAGCTGGCCAAGGAGAAAGCAGTCATCCTGAGCCCTCGTaGCCCTTCCTTGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: ARGDDLWSQPPAGQGESSHPEPS*PFLAPW
Trigger: CCAGGGTGCAAGGAAGGGGCACGAGGGCTCAGGATG...ACTGCTTTCTCCTTGGCCAGCTGGAGGCTGAGACCACAGGTCATCTCCCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp AGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGGGTGGGAAAAGGGGGTaGTGGGACCAGCCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: SPADTKTPSTGHSHHREKGGKRG*WDQPPV
Trigger: CACTGGAGGCTGGTCCCAGCACCCCCTTTTCCCACC...CTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp GGCGGGGAAGCCTCCCACTTCCTGTTGTTAAAGCTAGCCCAGCCCAGCCGACACACAGGGAAGGCTGGTTaGCTGGATGGCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GGEASHFLLLKLAQPSRHTGKAG*LDGTGL
Trigger: CAGCCCTGTGCCATCCAGCCAACCAGCCTTCCCTGT...GTGTCGGCTGGGCTGGGCTAGCTTTAACAACAGGAAGTGGGAGGCTTCCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp AGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGGGGAAAAGGGGGTGCTaGGACCAGCCTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SPADTKTPSTGHSHHREKGKRGC*DQPPVV
Trigger: CACCACTGGAGGCTGGTCCCAGCACCCCCTTTTCCC...CTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp GACGGGGAGGAGCTTTCAGGAAGGATAAAGGTACCCACTAGCCAGGCCCAGCCTGCCCAAGGGACTCGGTaGCTCACAGTAGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: DGEELSGRIKVPTSQAQPAQGTR*LTVGLG
Trigger: ACCCAGGCCTACTGTGAGTCACCGAGTCCCTTGGGC...AGGCTGGGCCTGGCTAGTGGGTACCTTTATCCTTCCTGAAAGCTCCTCCCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp GCCAGGGGAGATGACCTGTGGTCTCAGCCTCCAGCTGGCCAAGGAGAAAGCAGTGGGGAGTTCAAATGCTaGGGCAGCACCCCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: ARGDDLWSQPPAGQGESSGEFKC*GSTPSP
Trigger: AGGGCTAGGGGTGCTGCCTCAGCATTTGAACTCCCC...ACTGCTTTCTCCTTGGCCAGCTGGAGGCTGAGACCACAGGTCATCTCCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp GGCGGGGAAGCCTCCCACTTCCTGTTGTTAAAGCTAGCCCAGCCCAGCCGACACATGGCCGTCTCGATGTaGGACGACTCGAAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: GGEASHFLLLKLAQPSRHMAVSM*DDSKSS
Trigger: CGAGCTCTTCGAGTCGTCGCACATCGAGACGGCCAT...GTGTCGGCTGGGCTGGGCTAGCTTTAACAACAGGAAGTGGGAGGCTTCCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp CAATACCTGAAGAGCAGTAAGCCACCCCTTCAAGAAGGGCCCGCTGAGGAAACAAGGGGCCTGGTGCCATaGCCCCCGTGCACCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QYLKSSKPPLQEGPAEETRGLVP*PPCTRP
Trigger: AGGCCTGGTGCACGGGGGGCATGGCACCAGGCCCCT...TGTTTCCTCAGCGGGCCCTTCTTGAAGGGGTGGCTTACTGCTCTTCAGGTATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp AGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGCCACAGCTGACTGGATaGGGCCAACCTTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SPADTKTPSTGHSHHREKPQLTG*GQPSCP
Trigger: GGGACAGGAAGGTTGGCCCCATCCAGTCAGCTGTGG...CTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp GGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCTGTGCAAAACGCATTTaGTCAAGGTCAACATGGCGT +
Preference number: 4 (lower is better)
Translates to: GLGLSHLALWRAEQGPGACAKRI*SRSTWR
Trigger: ACGCCATGTTGACCTTGACCAAATGCGTTTTGCACA...GGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CAA 72 bp GCGTTTACATTCATCCTGAGCCCTCGTGCCCCTTCCTaGCACCCTGGGCCAGGGGAGATGACCTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: AFTFILSPRAPS*HPGPGEMTCGL
Trigger: GAGACCACAGGTCATCTCCCCTGGCCCAGGGTGCAAGGAAGGGGCACGAGGGCTCAGGATGAATGTAAACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp CACAACTTGCAGCAGTCATCACAGGCGAATGCAGAGCTAAGTCAGACTGGGCCACACAGGGCTGCCGTCTaGCTCGGTGGCACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HNLQQSSQANAELSQTGPHRAAV*LGGTAG
Trigger: CCCAGCAGTGCCACCGAGTCAGACGGCAGCCCTGTG...TGGCCCAGTCTGACTTAGCTCTGCATTCGCCTGTGATGACTGCTGCAAGTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp GATGAGGCCCTGGTGGACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCGTAGGCGTCGTTGAGTaGCAGGTTCATCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: DEALVDAQSHVSKSRGLSVGVVE*QVHLLH
Trigger: ATGCAGAAGATGAACCTGTCACTCAACGACGCCTAC...GGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp GGCGGGGAAGCCTCCCACTTCCTGTTGTTAAAGCTAGCCCAGCCCAGCCGACACTCCCCCACCTTCTCTTaGACTCCTCCCTACACTCCA +
Preference number: 4 (lower is better)
Translates to: GGEASHFLLLKLAQPSRHSPTFS*TPPYTP
Trigger: TGGAGTGTAGGGAGGAGTGCAAGAGAAGGTGGGGGA...GTGTCGGCTGGGCTGGGCTAGCTTTAACAACAGGAAGTGGGAGGCTTCCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp GCCCAGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGACCCACTGTTCTTCGTTaGCTTTGTCCTGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: AQPSRHQNALHWTQPPSGPTVLR*LCPDRA
Trigger: AGCTCTGTCAGGACAAAGGCAACGAAGAACAGTGGG...TCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp AGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGTTTCGCTCTGCCATCTaGCCAGCTAGTCCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SPADTKTPSTGHSHHREKFRSAI*PASPQG
Trigger: GCCTTGGGGACTAGCTGGGCAGATGGCAGAGCGAAA...CTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp GGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCAACATTTCTCTCTCTTaGAGGATCAGGAAAGGGATG +
Preference number: 4 (lower is better)
Translates to: GLGLSHLALWRAEQGPGANISLS*RIRKGM
Trigger: CATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTT...GGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGACAGCCCTGGAAGGAAGTAGGTaGCCTGGCCCTGCATTTCGC +
Preference number: 4 (lower is better)
Translates to: ADTKTPSTGHSHHREKTALEGSR*PGPAFR
Trigger: GCGAAATGCAGGGCCAGGCCACCTACTTCCTTCCAG...GGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp GCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCATGCCCCCTGGTCAAGGTCAACATaGCGTCTGTCTTTTCCATTA +
Preference number: 4 (lower is better)
Translates to: ALPPSPVESRAGAWCHAPWSRST*RLSFPL
Trigger: TAATGGAAAAGACAGACGCCATGTTGACCTTGACCA...GGGGGCATGGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GGCCAGAGGTGGCGGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAAAACTGGCCACCTTCTaGCATACCCTCATTTACACA +
Preference number: 4 (lower is better)
Translates to: GQRWRAWALPPSPVESRAKLATF*HTLIYT
Trigger: TGTGTAAATGAGGGTATGCCAGAAGGTGGCCAGTTT...TGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCCGCCACCTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp GGCCAGAGGTGGCGGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCACTGTTTGAAACTTGTTaGAACCACCTTGGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: GQRWRAWALPPSPVESRALFETC*NHLGGS
Trigger: ACTACCTCCAAGGTGGTTTCAACAAGTTTCAAACAG...TGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCCGCCACCTCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp TACCCAGACGGGGAGGAGCTTTCAGGAAGGATAAAGGTACCCACTAGCCAGGCCACGTGTGCTGAGGCGTaGTGCGGAGCAAGTGAGACC +
Preference number: 4 (lower is better)
Translates to: YPDGEELSGRIKVPTSQATCAEA*CGASET
Trigger: GGTCTCACTTGCTCCGCATCACGCCTCAGCACACGT...GGCCTGGCTAGTGGGTACCTTTATCCTTCCTGAAAGCTCCTCCCCGTCTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp TACCCAGACGGGGAGGAGCTTTCAGGAAGGATAAAGGTACCCACTAGCCAGGCCGGTGACACCAGGATGTaGGGAACGCCTGGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: YPDGEELSGRIKVPTSQAGDTRM*GTPGLQ
Trigger: TTGGAGGCCAGGCGTTCCTCACATCCTGGTGTCACC...GGCCTGGCTAGTGGGTACCTTTATCCTTCCTGAAAGCTCCTCCCCGTCTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp GGCGGGGAAGCCTCCCACTTCCTGTTGTTAAAGCTAGCCCAGCCCAGCCGACACTCGTTGCCTTTGTCCTaGCAGAGCTTCCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: GGEASHFLLLKLAQPSRHSLPLS*QSFLSH
Trigger: ATGGGAGAGGAAGCTCTGTCAGGACAAAGGCAACGA...GTGTCGGCTGGGCTGGGCTAGCTTTAACAACAGGAAGTGGGAGGCTTCCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp GCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCATGCCCCCGGATCAGGAAAGGGATaGAATACTGGGTTATACAAT +
Preference number: 4 (lower is better)
Translates to: ALPPSPVESRAGAWCHAPGSGKG*NTGLYN
Trigger: ATTGTATAACCCAGTATTTCATCCCTTTCCTGATCC...GGGGGCATGGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp ACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCAGCAAGCCCTGCAGTGCACCAGAGGGATGGATaGGACGGCAGAAAATGCAAA +
Preference number: 4 (lower is better)
Translates to: TPKATCPRAEASPASPAVHQRDG*DGRKCK
Trigger: TTTGCATTTTCTGCCGTCTCATCCATCCCTCTGGTG...CACTGCAGGGCTTGCTGGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp GACGGGGAGGAGCTTTCAGGAAGGATAAAGGTACCCACTAGCCAGGCCCAGCCTAGAGAGCCCATGACGTaGTGTCAGCTAGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: DGEELSGRIKVPTSQAQPREPMT*CQLGGA
Trigger: AGCTCCCCCTAGCTGACAGCACGTCATGGGCTCTCT...AGGCTGGGCCTGGCTAGTGGGTACCTTTATCCTTCCTGAAAGCTCCTCCCCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp CAATACCTGAAGAGCAGTAAGCCACCCCTTCAAGAAGGGCCCGCTGAGGAAACAGCCTCCAGCTCCTCCTaGAGCCACTCGGCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: QYLKSSKPPLQEGPAEETASSSS*SHSALL
Trigger: CAAGAGCGCCGAGTGGCTGCAGGAGGAGCTGGAGGC...TGTTTCCTCAGCGGGCCCTTCTTGAAGGGGTGGCTTACTGCTCTTCAGGTATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp ACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCAGCAAGCCCTGCAGTGCCACCAATCACAACTTaGAGCAGTCATCACAGGCGA +
Preference number: 4 (lower is better)
Translates to: TPKATCPRAEASPASPAVPPITT*SSHHRR
Trigger: TCGCCTGTGATGACTGCTGCAAGTTGTGATTGGTGG...CACTGCAGGGCTTGCTGGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GTGGGAGGTCTGTGCGCTGTGATGTTTCAGCTTGCTAAGCCCGAAACAACATCTCCGCCTTGCAGCGCGTaGCGAAGCGCTCCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: VGGLCAVMFQLAKPETTSPPCSA*RSAPCR
Trigger: CCGACAAGGAGCGCTTCGCCACGCGCTGCAAGGCGG...AGATGTTGTTTCGGGCTTAGCAAGCTGAAACATCACAGCGCACAGACCTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp GACGGGGAGGAGCTTTCAGGAAGGATAAAGGTACCCACTAGCCAGGCCCAGCCTCCAAGGAGAAAGCAGTaGGGACCCGAGTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: DGEELSGRIKVPTSQAQPPRRKQ*GPESAE
Trigger: CTCAGCAGACTCGGGTCCCCACTGCTTTCTCCTTGG...AGGCTGGGCCTGGCTAGTGGGTACCTTTATCCTTCCTGAAAGCTCCTCCCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp GGCGGGGAAGCCTCCCACTTCCTGTTGTTAAAGCTAGCCCAGCCCAGCCGACACGCTGGGCAGAAACATTaGGTCACCAGGCTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: GGEASHFLLLKLAQPSRHAGQKH*VTRLRD
Trigger: ATCTCTGAGCCTGGTGACCCAATGTTTCTGCCCAGC...GTGTCGGCTGGGCTGGGCTAGCTTTAACAACAGGAAGTGGGAGGCTTCCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp GGCGGGGAAGCCTCCCACTTCCTGTTGTTAAAGCTAGCCCAGCCCAGCCGACACATTCCCCTCCCTCGTTaGGGGAGTTCAAATGCTGAG +
Preference number: 4 (lower is better)
Translates to: GGEASHFLLLKLAQPSRHIPLPR*GSSNAE
Trigger: CTCAGCATTTGAACTCCCCCAACGAGGGAGGGGAAT...GTGTCGGCTGGGCTGGGCTAGCTTTAACAACAGGAAGTGGGAGGCTTCCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp TACCCAGACGGGGAGGAGCTTTCAGGAAGGATAAAGGTACCCACTAGCCAGGCCCTGGGCTGGTTCTCTTaGAGCCGCTCCCATGGGTTG +
Preference number: 4 (lower is better)
Translates to: YPDGEELSGRIKVPTSQALGWFS*SRSHGL
Trigger: CAACCCATGGGAGCGGCTCCAAGAGAACCAGCCCAG...GGCCTGGCTAGTGGGTACCTTTATCCTTCCTGAAAGCTCCTCCCCGTCTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp ACCATCCAGCCCACCAATCACAACTTGCAGCAGTCATCACAGGCGAATGCAGAGTCCCACCTAGCCCTGTaGAGAGCCGAGCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: TIQPTNHNLQQSSQANAESHLAL*RAEQGP
Trigger: AGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGA...CTCTGCATTCGCCTGTGATGACTGCTGCAAGTTGTGATTGGTGGGCTGGATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp CACAACTTGCAGCAGTCATCACAGGCGAATGCAGAGCTAAGTCAGACTGGGCCACAGAGGTGGCGGGCTTaGGCTCTCCCACCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: HNLQQSSQANAELSQTGPQRWRA*ALPPSP
Trigger: AGGGCTAGGTGGGAGAGCCCAAGCCCGCCACCTCTG...TGGCCCAGTCTGACTTAGCTCTGCATTCGCCTGTGATGACTGCTGCAAGTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GTCCATCCTTGCCCCACTTGCCCCCGCCCTAGGGTTGAAATGGGTGCAAGTCTCGCCCTAGGGTTGAAATaGGTGCAAGTCTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VHPCPTCPRPRVEMGASLALGLK*VQVSWQ
Trigger: CTGCCAGGAGACTTGCACCCATTTCAACCCTAGGGC...GAGACTTGCACCCATTTCAACCCTAGGGCGGGGGCAAGTGGGGCAAGGATGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCACACAGGGCTGCCGTCTaGCTCGGTGGCACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRHMDWDDGHTITCDGASHRAAV*LGGTAG
Trigger: CCCAGCAGTGCCACCGAGTCAGACGGCAGCCCTGTG...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp CTGGAAGGAAGTAGGTGGCCTGGCCCTGCATTTCGCTCTGCCATCTGCCCAGCTCATCTGGAGGCTGACTaGGCTAGCAGTCACCACATT +
Preference number: 4 (lower is better)
Translates to: LEGSRWPGPAFRSAICPAHLEAD*ASSHHI
Trigger: AATGTGGTGACTGCTAGCTCAGTCAGCCTCCAGATG...AGCTGGGCAGATGGCAGAGCGAAATGCAGGGCCAGGCCACCTACTTCCTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp TACCCAGACGGGGAGGAGCTTTCAGGAAGGATAAAGGTACCCACTAGCCAGGCCAATGGGCCCCACCCCTaGCACTTGCTAGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: YPDGEELSGRIKVPTSQANGPHP*HLLDLP
Trigger: AGGAAGGTCTAGCAAGTGGCAGGGGTGGGGCCCATT...GGCCTGGCTAGTGGGTACCTTTATCCTTCCTGAAAGCTCCTCCCCGTCTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp TGCCACTTGCTAGACCTTCCTCAGGAGGCCCATGTGTCAGTGATATCTCCTACCCGCTCCTTGTCGGCGTaGTTGGGGATGATGGAGCGG +
Preference number: 4 (lower is better)
Translates to: CHLLDLPQEAHVSVISPTRSLSA*LGMMER
Trigger: CCGCTCCATCATCCCCAACCACGCCGACAAGGAGCG...GGTAGGAGATATCACTGACACATGGGCCTCCTGAGGAAGGTCTAGCAAGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCACGTAGAGCAGCACGGTaGCCGCCTTGCAGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: LRHMDWDDGHTITCDGASRRAAR*PPCSAW
Trigger: CCACGCGCTGCAAGGCGGCCACCGTGCTGCTCTACG...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp CACAACTTGCAGCAGTCATCACAGGCGAATGCAGAGCTAAGTCAGACTGGGCCAACTCGGTGGCACTGCTaGGCAGCTCTCGGTCCGACT +
Preference number: 4 (lower is better)
Translates to: HNLQQSSQANAELSQTGPTRWHC*AALGPT
Trigger: AGTCGGACCGAGAGCTGCCCAGCAGTGCCACCGAGT...TGGCCCAGTCTGACTTAGCTCTGCATTCGCCTGTGATGACTGCTGCAAGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp AAGGCACTGGGGCAGGATCATCTGGCAAGGAGACAGACATTGCAGCTTCATGAGTGCCGTCTGACTCGGTaGCACTGCTGGGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: KALGQDHLARRQTLQLHECRLTR*HCWAAL
Trigger: GAGAGCTGCCCAGCAGTGCCACCGAGTCAGACGGCA...CTCATGAAGCTGCAATGTCTGTCTCCTTGCCAGATGATCCTGCCCCAGTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp AAGGCACTGGGGCAGGATCATCTGGCAAGGAGACAGACATTGCAGCTTCATGAGGCACGTCCAGGTTGGTaGAGTCCTTGGCGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: KALGQDHLARRQTLQLHEARPGW*SPWRSR
Trigger: TCGGCTGCGCCAAGGACTCCACCAACCTGGACGTGC...CTCATGAAGCTGCAATGTCTGTCTCCTTGCCAGATGATCCTGCCCCAGTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp GCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGACAGCCTGGGGCAGGATCATCTaGCAAGGAGACAGACATTGC +
Preference number: 4 (lower is better)
Translates to: ADTKTPSTGHSHHREKTAWGRII*QGDRHC
Trigger: GCAATGTCTGTCTCCTTGCCAGATGATCCTGCCCCA...GGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp ACCATCCAGCCCACCAATCACAACTTGCAGCAGTCATCACAGGCGAATGCAGAGACCTGGAGGTCGGGCTaGGCCCCACCACCTAATGTC +
Preference number: 4 (lower is better)
Translates to: TIQPTNHNLQQSSQANAETWRSG*APPPNV
Trigger: GACATTAGGTGGTGGGGCCCAGCCCGACCTCCAGGT...CTCTGCATTCGCCTGTGATGACTGCTGCAAGTTGTGATTGGTGGGCTGGATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp TGCCACTTGCTAGACCTTCCTCAGGAGGCCCATGTGTCAGTGATATCTCCTACCGTGATGCGGAGCAAGTaGGACCCGTGGGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: CHLLDLPQEAHVSVISPTVMRSK*DPWEVC
Trigger: ACAGACCTCCCACGGGTCTCACTTGCTCCGCATCAC...GGTAGGAGATATCACTGACACATGGGCCTCCTGAGGAAGGTCTAGCAAGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp TGCCACTTGCTAGACCTTCCTCAGGAGGCCCATGTGTCAGTGATATCTCCTACCGAGAGACACGTGTGCTaGGGCGTGATGCGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: CHLLDLPQEAHVSVISPTERHVC*GVMRSK
Trigger: CTTGCTCCGCATCACGCCTCAGCACACGTGTCTCTC...GGTAGGAGATATCACTGACACATGGGCCTCCTGAGGAAGGTCTAGCAAGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp GCCAGGGGAGATGACCTGTGGTCTCAGCCTCCAGCTGGCCAAGGAGAAAGCAGTTGCCTTCCTACAAGATaGCATACGGGTTCACCCACT +
Preference number: 4 (lower is better)
Translates to: ARGDDLWSQPPAGQGESSCLPTR*HTGSPT
Trigger: AGTGGGTGAACCCGTATGTCATCTTGTAGGAAGGCA...ACTGCTTTCTCCTTGGCCAGCTGGAGGCTGAGACCACAGGTCATCTCCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp GCCAGGGGAGATGACCTGTGGTCTCAGCCTCCAGCTGGCCAAGGAGAAAGCAGTATGGGGCTTCATAAGTaGGGTGTGCTTAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: ARGDDLWSQPPAGQGESSMGLHK*GVLKWA
Trigger: GGCCCATTTAAGCACACCTCACTTATGAAGCCCCAT...ACTGCTTTCTCCTTGGCCAGCTGGAGGCTGAGACCACAGGTCATCTCCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp ACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCCCACACTATCACTTGTaGTGGGGCTTCATAAGTGAG +
Preference number: 4 (lower is better)
Translates to: TKTPSTGHSHHREKTARAPHYHL*WGFISE
Trigger: CTCACTTATGAAGCCCCATCACAAGTGATAGTGTGG...GGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp GCCAGGGGAGATGACCTGTGGTCTCAGCCTCCAGCTGGCCAAGGAGAAAGCAGTACACATGGACTGGGATaGTGGCCACACTATCACTTG +
Preference number: 4 (lower is better)
Translates to: ARGDDLWSQPPAGQGESSTHGLG*WPHYHL
Trigger: CAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGT...ACTGCTTTCTCCTTGGCCAGCTGGAGGCTGAGACCACAGGTCATCTCCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp GACGGGGAGGAGCTTTCAGGAAGGATAAAGGTACCCACTAGCCAGGCCCAGCCTCTGACTCCTAAGGGATaGCTGGGCCTCAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: DGEELSGRIKVPTSQAQPLTPKG*LGLNSF
Trigger: GAAGGAATTGAGGCCCAGGCATCCCTTAGGAGTCAG...AGGCTGGGCCTGGCTAGTGGGTACCTTTATCCTTCCTGAAAGCTCCTCCCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp GCCAGGGGAGATGACCTGTGGTCTCAGCCTCCAGCTGGCCAAGGAGAAAGCAGTTTCATAAGTGAGGTGTaGTTAAATGGGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: ARGDDLWSQPPAGQGESSFISEV*LNGPHP
Trigger: GGGGTGGGGCCCATTTAAGCACACCTCACTTATGAA...ACTGCTTTCTCCTTGGCCAGCTGGAGGCTGAGACCACAGGTCATCTCCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp ACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCAGCAAGCCCTGCAGTGCTCAAACACTCTTTGTaGTCCAGGGAGCTTGGATTT +
Preference number: 4 (lower is better)
Translates to: TPKATCPRAEASPASPAVLKHSL*SRELGF
Trigger: AAATCCAAGCTCCCTGGAGCACAAAGAGTGTTTGAG...CACTGCAGGGCTTGCTGGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp ACCATCCAGCCCACCAATCACAACTTGCAGCAGTCATCACAGGCGAATGCAGAGTCACATGCTGAGTGCTaGTCCGTCAGGGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: TIQPTNHNLQQSSQANAESHAEC*SVRDPG
Trigger: GCCAGGGTCCCTGACGGAGCAGCACTCAGCATGTGA...CTCTGCATTCGCCTGTGATGACTGCTGCAAGTTGTGATTGGTGGGCTGGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp TACCCAGACGGGGAGGAGCTTTCAGGAAGGATAAAGGTACCCACTAGCCAGGCCTTTGGGGTGTGCCTCTaGCTCCAGGGCTACCTTTCA +
Preference number: 4 (lower is better)
Translates to: YPDGEELSGRIKVPTSQAFGVCL*LQGYLS
Trigger: TGAAAGGTAGCCCTGGAGCCAGAGGCACACCCCAAA...GGCCTGGCTAGTGGGTACCTTTATCCTTCCTGAAAGCTCCTCCCCGTCTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp AAGGCACTGGGGCAGGATCATCTGGCAAGGAGACAGACATTGCAGCTTCATGAGAGGGGAGATGACCTGTaGTCTCAGCCTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: KALGQDHLARRQTLQLHERGDDL*SQPPAG
Trigger: GCCAGCTGGAGGCTGAGACCACAGGTCATCTCCCCT...CTCATGAAGCTGCAATGTCTGTCTCCTTGCCAGATGATCCTGCCCCAGTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp TACCCAGACGGGGAGGAGCTTTCAGGAAGGATAAAGGTACCCACTAGCCAGGCCCCATGGCTAAGGCACTaGGGCAGGATCATCTGGCAA +
Preference number: 4 (lower is better)
Translates to: YPDGEELSGRIKVPTSQAPWLRH*GRIIWQ
Trigger: TTGCCAGATGATCCTGCCCCAGTGCCTTAGCCATGG...GGCCTGGCTAGTGGGTACCTTTATCCTTCCTGAAAGCTCCTCCCCGTCTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCAGACTGGGGGCTGGGCTaGTTCTCTTGGAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LRHMDWDDGHTITCDGASDWGLG*FSWSRS
Trigger: GGAGCGGCTCCAAGAGAACCAGCCCAGCCCCCAGTC...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp CTCGACTGTGGCAAGATTTTAATCTGCTGCGCTAAAGAATCCCTGAAAGCCACCGGAGCTGGTTTTTCATaGGGAGCGCGGGCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LDCGKILICCAKESLKATGAGFS*GARAAR
Trigger: CCGGGCCGCCCGCGCTCCCCATGAAAAACCAGCTCC...GGTGGCTTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTTGCCACAGTCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp CAATACCTGAAGAGCAGTAAGCCACCCCTTCAAGAAGGGCCCGCTGAGGAAACATGCTCACTCGACGCGTaGTTGTCGCACGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QYLKSSKPPLQEGPAEETCSLDA*LSHGLL
Trigger: AAGCAGCCCGTGCGACAACCACGCGTCGAGTGAGCA...TGTTTCCTCAGCGGGCCCTTCTTGAAGGGGTGGCTTACTGCTCTTCAGGTATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCAAAGGGATGAAATACTaGGTTATACAATCCACTGTT +
Preference number: 4 (lower is better)
Translates to: GLGLSHLALWRAEQGPGAKGMKY*VIQSTV
Trigger: AACAGTGGATTGTATAACCCAGTATTTCATCCCTTT...GGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GGCCAGAGGTGGCGGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCATCAATTTCTCGACTGTaGCAAGATTTTAATCTGCTG +
Preference number: 4 (lower is better)
Translates to: GQRWRAWALPPSPVESRASISRL*QDFNLL
Trigger: CAGCAGATTAAAATCTTGCCACAGTCGAGAAATTGA...TGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCCGCCACCTCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCACAAAGTCCCGTTGTTaGTTCGGGATATATATATAT +
Preference number: 4 (lower is better)
Translates to: GLGLSHLALWRAEQGPGATKSRC*FGIYIY
Trigger: ATATATATATATCCCGAACCAACAACGGGACTTTGT...GGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CAA 72 bp GCACTGGGGCAGGATCATCTGGCAAGGAGACAGACATaGCAGCTTCATGAGGAGCTGTGTGGTCAGACCTCG +
Preference number: 4 (lower is better)
Translates to: ALGQDHLARRQT*QLHEELCGQTS
Trigger: CGAGGTCTGACCACACAGCTCCTCATGAAGCTGCAATGTCTGTCTCCTTGCCAGATGATCCTGCCCCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp GCCAGGGGAGATGACCTGTGGTCTCAGCCTCCAGCTGGCCAAGGAGAAAGCAGTCCTTCACTTGTCAAATaGGGAAAAAGGTCCCCCTAC +
Preference number: 4 (lower is better)
Translates to: ARGDDLWSQPPAGQGESSPSLVK*GKRSPY
Trigger: GTAGGGGGACCTTTTTCCTCATTTGACAAGTGAAGG...ACTGCTTTCTCCTTGGCCAGCTGGAGGCTGAGACCACAGGTCATCTCCCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCATCCAGACTCAGGGACTaGCAGGGGGCCCCATGGCTA +
Preference number: 4 (lower is better)
Translates to: LRHMDWDDGHTITCDGASSRLRD*QGAPWL
Trigger: TAGCCATGGGGCCCCCTGTCAGTCCCTGAGTCTGGA...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp CTGGAAGGAAGTAGGTGGCCTGGCCCTGCATTTCGCTCTGCCATCTGCCCAGCTTACTGGCCGAGCTACTaGACAACTCAGTCCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LEGSRWPGPAFRSAICPAYWPSY*TTQSCN
Trigger: ATTACAGGACTGAGTTGTTCAGTAGCTCGGCCAGTA...AGCTGGGCAGATGGCAGAGCGAAATGCAGGGCCAGGCCACCTACTTCCTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp GGTCTGTGCGCTGTGATGTTTCAGCTTGCTAAGCCCGAAACAACATCTAAGCCAGTGAACTCGCCGCCGTaGTCGAAGGCGTTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GLCAVMFQLAKPETTSKPVNSPP*SKALGR
Trigger: CCTACCCAACGCCTTCGAGCACGGCGGCGAGTTCAC...TGGCTTAGATGTTGTTTCGGGCTTAGCAAGCTGAAACATCACAGCGCACAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp CTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCACCCCCACACCTTGCCAAGACAGTCTGTTTCTaGTGGCTTTATTTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LDTATIGKRQPGPPPHLAKTVCF*WLYFWP
Trigger: AGGCCAAAAATAAAGCCAGCAGAAACAGACTGTCTT...GGCAAGGTGTGGGGGTGGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp GCCAGGGGAGATGACCTGTGGTCTCAGCCTCCAGCTGGCCAAGGAGAAAGCAGTAAAGCATACAGTAGGTaGTTCCTCCAGACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: ARGDDLWSQPPAGQGESSKAYSR*FLQTQG
Trigger: TCCCTGAGTCTGGAGGAAGCACCTACTGTATGCTTT...ACTGCTTTCTCCTTGGCCAGCTGGAGGCTGAGACCACAGGTCATCTCCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp CTCGACTGTGGCAAGATTTTAATCTGCTGCGCTAAAGAATCCCTGAAAGCCACCGCTGCCACTCGGCCGTaGCCTCGTCGTAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LDCGKILICCAKESLKATAATRP*PRRRAA
Trigger: TGCTGCTCTACGACGAGGCCACGGCCGAGTGGCAGC...GGTGGCTTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTTGCCACAGTCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp TGGCCACCTTCTGGCATACCCTCATTTACACAAATCTGGTACATCTTTCTGGGTAGACTGGGCCAAGGGTaGGAGGCGGCACGACTGGGG +
Preference number: 4 (lower is better)
Translates to: WPPSGIPSFTQIWYIFLGRLGQG*EAARLG
Trigger: CCCCAGTCGTGCCGCCTCCCACCCTTGGCCCAGTCT...ACCCAGAAAGATGTACCAGATTTGTGTAAATGAGGGTATGCCAGAAGGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCAGGATCTGCTTGTAGGTaGACTCGCCGCCGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: LRHMDWDDGHTITCDGASGSACR*TRRRAR
Trigger: TCGAGCACGGCGGCGAGTTCACCTACAAGCAGATCC...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp CTCGACTGTGGCAAGATTTTAATCTGCTGCGCTAAAGAATCCCTGAAAGCCACCCACAGTGACCGTCACTaGGCGGCTGATGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LDCGKILICCAKESLKATHSDRH*AADACQ
Trigger: CTGGCAGGCATCAGCCGCTCAGTGACGGTCACTGTG...GGTGGCTTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTTGCCACAGTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp CACAACTTGCAGCAGTCATCACAGGCGAATGCAGAGCTAAGTCAGACTGGGCCATCAAGAAGGGCCCGCTaGGGAAACAGAGGCTTCACA +
Preference number: 4 (lower is better)
Translates to: HNLQQSSQANAELSQTGPSRRAR*GNRGFT
Trigger: TGTGAAGCCTCTGTTTCCTCAGCGGGCCCTTCTTGA...TGGCCCAGTCTGACTTAGCTCTGCATTCGCCTGTGATGACTGCTGCAAGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp CTCGACTGTGGCAAGATTTTAATCTGCTGCGCTAAAGAATCCCTGAAAGCCACCCGCTCCTTGTCGGCGTaGTTGGGGATGATGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LDCGKILICCAKESLKATRSLSA*LGMMER
Trigger: CCGCTCCATCATCCCCAACCACGCCGACAAGGAGCG...GGTGGCTTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTTGCCACAGTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp CTCGACTGTGGCAAGATTTTAATCTGCTGCGCTAAAGAATCCCTGAAAGCCACCCGAGCACGTCCAGGTTaGTGGAGTCCTTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LDCGKILICCAKESLKATRARPG*WSPWRS
Trigger: GCTGCGCCAAGGACTCCACCAACCTGGACGTGCTCG...GGTGGCTTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTTGCCACAGTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCATCCTGTAATCTCTCCTaGACCCCGGGGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LRHMDWDDGHTITCDGASSCNLS*TPGQLP
Trigger: AGGCAGCTGCCCCGGGGTCCAGGAGAGATTACAGGA...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp TGCCACTTGCTAGACCTTCCTCAGGAGGCCCATGTGTCAGTGATATCTCCTACCTTGGAGCCGCTCCCATaGGTTGTCCCTGAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: CHLLDLPQEAHVSVISPTLEPLP*VVPESL
Trigger: AAGACTCTCAGGGACAACCCATGGGAGCGGCTCCAA...GGTAGGAGATATCACTGACACATGGGCCTCCTGAGGAAGGTCTAGCAAGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp CTCGACTGTGGCAAGATTTTAATCTGCTGCGCTAAAGAATCCCTGAAAGCCACCGGAGAAGGAAGAACCTaGAGGTCGGGCTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LDCGKILICCAKESLKATGEGRT*RSGWAP
Trigger: TGGGGCCCAGCCCGACCTCCAGGTTCTTCCTTCTCC...GGTGGCTTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTTGCCACAGTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp CTGGAAGGAAGTAGGTGGCCTGGCCCTGCATTTCGCTCTGCCATCTGCCCAGCTCTGTTTGAAACTTGTTaGAACCACCTTGGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: LEGSRWPGPAFRSAICPALFETC*NHLGGS
Trigger: ACTACCTCCAAGGTGGTTTCAACAAGTTTCAAACAG...AGCTGGGCAGATGGCAGAGCGAAATGCAGGGCCAGGCCACCTACTTCCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp CTCGACTGTGGCAAGATTTTAATCTGCTGCGCTAAAGAATCCCTGAAAGCCACCGGATCTGCTTGTAGGTaGACTCGCCGCCGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: LDCGKILICCAKESLKATGSACR*TRRRAR
Trigger: TCGAGCACGGCGGCGAGTTCACCTACAAGCAGATCC...GGTGGCTTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTTGCCACAGTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp TGCCACTTGCTAGACCTTCCTCAGGAGGCCCATGTGTCAGTGATATCTCCTACCCCCATGGGTTGTCCCTaGGAGTCTTCTAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: CHLLDLPQEAHVSVISPTPMGCP*ESSRKV
Trigger: CACTTTCCTAGAAGACTCTCAGGGACAACCCATGGG...GGTAGGAGATATCACTGACACATGGGCCTCCTGAGGAAGGTCTAGCAAGTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp CAATACCTGAAGAGCAGTAAGCCACCCCTTCAAGAAGGGCCCGCTGAGGAAACAAAGAGCTGTCCACGTTaGTCTCGCAGTGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: QYLKSSKPPLQEGPAEETKSCPR*SRSAQS
Trigger: ACTCTGAGCACTGCGAGACCAACGTGGACAGCTCTT...TGTTTCCTCAGCGGGCCCTTCTTGAAGGGGTGGCTTACTGCTCTTCAGGTATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp TGGCCACCTTCTGGCATACCCTCATTTACACAAATCTGGTACATCTTTCTGGGTGCACGTCCAGGTTGGTaGAGTCCTTGGCGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: WPPSGIPSFTQIWYIFLGARPGW*SPWRSR
Trigger: TCGGCTGCGCCAAGGACTCCACCAACCTGGACGTGC...ACCCAGAAAGATGTACCAGATTTGTGTAAATGAGGGTATGCCAGAAGGTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GTGGGAGGTCTGTGCGCTGTGATGTTTCAGCTTGCTAAGCCCGAAACAACATCTGCTGCAGAGAGCATCTaGAGGCTGACTGAGCTAGCA +
Preference number: 4 (lower is better)
Translates to: VGGLCAVMFQLAKPETTSAAESI*RLTELA
Trigger: TGCTAGCTCAGTCAGCCTCCAGATGCTCTCTGCAGC...AGATGTTGTTTCGGGCTTAGCAAGCTGAAACATCACAGCGCACAGACCTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp CACAACTTGCAGCAGTCATCACAGGCGAATGCAGAGCTAAGTCAGACTGGGCCATGTGGTTGGTGGGCGTaGAAAAGTAGAGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: HNLQQSSQANAELSQTGPCGWWA*KSRAAH
Trigger: GTGAGCAGCTCTACTTTTCCACGCCCACCAACCACA...TGGCCCAGTCTGACTTAGCTCTGCATTCGCCTGTGATGACTGCTGCAAGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp CTCGACTGTGGCAAGATTTTAATCTGCTGCGCTAAAGAATCCCTGAAAGCCACCAGAGCTAAGTCAGACTaGGCCAAGGGTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LDCGKILICCAKESLKATRAKSD*AKGGRR
Trigger: CCGCCTCCCACCCTTGGCCCAGTCTGACTTAGCTCT...GGTGGCTTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTTGCCACAGTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp ACCATCCAGCCCACCAATCACAACTTGCAGCAGTCATCACAGGCGAATGCAGAGGGACCACCAGAGGGATaGATGAGACGGCAGAAAATG +
Preference number: 4 (lower is better)
Translates to: TIQPTNHNLQQSSQANAEGPPEG*MRRQKM
Trigger: CATTTTCTGCCGTCTCATCCATCCCTCTGGTGGTCC...CTCTGCATTCGCCTGTGATGACTGCTGCAAGTTGTGATTGGTGGGCTGGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp CTGGAAGGAAGTAGGTGGCCTGGCCCTGCATTTCGCTCTGCCATCTGCCCAGCTTCAGAGTACTCTGTTTaGAACTTGTTGAAACCACCT +
Preference number: 4 (lower is better)
Translates to: LEGSRWPGPAFRSAICPASEYSV*NLLKPP
Trigger: AGGTGGTTTCAACAAGTTTCAAACAGAGTACTCTGA...AGCTGGGCAGATGGCAGAGCGAAATGCAGGGCCAGGCCACCTACTTCCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp CTCGACTGTGGCAAGATTTTAATCTGCTGCGCTAAAGAATCCCTGAAAGCCACCATGGCCGTCTCGATGTaGGACGACTCGAAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: LDCGKILICCAKESLKATMAVSM*DDSKSS
Trigger: CGAGCTCTTCGAGTCGTCGCACATCGAGACGGCCAT...GGTGGCTTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTTGCCACAGTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp AACATTTCTCTCTCTTGCAGGATCAGGAAAGGGATGAAATACTGGGTTATACAAGCACGGTGGCCGCCTTaGAGCGCGTGGCGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: NISLSCRIRKGMKYWVIQARWPP*SAWRSA
Trigger: AGCGCTTCGCCACGCGCTGCAAGGCGGCCACCGTGC...TTGTATAACCCAGTATTTCATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp TGCCACTTGCTAGACCTTCCTCAGGAGGCCCATGTGTCAGTGATATCTCCTACCCCACATTTCAATAGCTaGCTGTTTGGGGTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: CHLLDLPQEAHVSVISPTPHFNS*LFGVCL
Trigger: GAGGCACACCCCAAACAGGCAGCTATTGAAATGTGG...GGTAGGAGATATCACTGACACATGGGCCTCCTGAGGAAGGTCTAGCAAGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCAGACAGCAGGACACACTaGTCTGGGGAAGGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LRHMDWDDGHTITCDGASDSRTH*SGEGLS
Trigger: AGAAAGGCCTTCCCCAGAGCAGTGTGTCCTGCTGTC...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp CAATACCTGAAGAGCAGTAAGCCACCCCTTCAAGAAGGGCCCGCTGAGGAAACAGTCATCACAGGCGAATaGAGAGCTAAGTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: QYLKSSKPPLQEGPAEETVITGE*RAKSDW
Trigger: CCAGTCTGACTTAGCTCTGCATTCGCCTGTGATGAC...TGTTTCCTCAGCGGGCCCTTCTTGAAGGGGTGGCTTACTGCTCTTCAGGTATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp GTGGGAGGTCTGTGCGCTGTGATGTTTCAGCTTGCTAAGCCCGAAACAACATCTAAGAGCTGTCCACGTTaGTCTCGCAGTGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: VGGLCAVMFQLAKPETTSKSCPR*SRSAQS
Trigger: ACTCTGAGCACTGCGAGACCAACGTGGACAGCTCTT...AGATGTTGTTTCGGGCTTAGCAAGCTGAAACATCACAGCGCACAGACCTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp GGTCTGTGCGCTGTGATGTTTCAGCTTGCTAAGCCCGAAACAACATCTAAGCCACTTGCCACTGGAGGCTaGGCAGAAACATTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: GLCAVMFQLAKPETTSKPLATGG*AETLGH
Trigger: GTGACCCAATGTTTCTGCCCAGCCTCCAGTGGCAAG...TGGCTTAGATGTTGTTTCGGGCTTAGCAAGCTGAAACATCACAGCGCACAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp GTGGGAGGTCTGTGCGCTGTGATGTTTCAGCTTGCTAAGCCCGAAACAACATCTAGTCTTCTAGGAAAGTaGCCTGAGGGAGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VGGLCAVMFQLAKPETTSSLLGK*PEGGSS
Trigger: AGAGGAGCCTCCCTCAGGCCACTTTCCTAGAAGACT...AGATGTTGTTTCGGGCTTAGCAAGCTGAAACATCACAGCGCACAGACCTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp TGGCCACCTTCTGGCATACCCTCATTTACACAAATCTGGTACATCTTTCTGGGTAGGATGAGGCCCTGGTaGACGCCCAAAGCCACGTGT +
Preference number: 4 (lower is better)
Translates to: WPPSGIPSFTQIWYIFLGRMRPW*TPKATC
Trigger: ACACGTGGCTTTGGGCGTCCACCAGGGCCTCATCCT...ACCCAGAAAGATGTACCAGATTTGTGTAAATGAGGGTATGCCAGAAGGTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCAGAGGTCTGTGCGCTGTaGTGTTTCAGCTTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: LRHMDWDDGHTITCDGASEVCAL*CFSLLS
Trigger: GCTTAGCAAGCTGAAACATCACAGCGCACAGACCTC...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR TCA 90 bp GGTCTGTGCGCTGTGATGTTTCAGCTTGCTAAGCCCGAAACAACATCTAAGCCAAGGCCCATGTGTCAGTaGTATCTCCTACCACAGCTG +
Preference number: 4 (lower is better)
Translates to: GLCAVMFQLAKPETTSKPRPMCQ*YLLPQL
Trigger: CAGCTGTGGTAGGAGATATCACTGACACATGGGCCT...TGGCTTAGATGTTGTTTCGGGCTTAGCAAGCTGAAACATCACAGCGCACAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR GCA 90 bp TGCCACTTGCTAGACCTTCCTCAGGAGGCCCATGTGTCAGTGATATCTCCTACCCAAGGAGACAGACATTaGAGCTTCATGAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: CHLLDLPQEAHVSVISPTQGDRH*SFMRSC
Trigger: ACAGCTCCTCATGAAGCTGCAATGTCTGTCTCCTTG...GGTAGGAGATATCACTGACACATGGGCCTCCTGAGGAAGGTCTAGCAAGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCAATGACAACCCCATCCTaGAGAGACACGTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LRHMDWDDGHTITCDGASMTTPS*RDTCAE
Trigger: CTCAGCACACGTGTCTCTCCAGGATGGGGTTGTCAT...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp GTGGGAGGTCTGTGCGCTGTGATGTTTCAGCTTGCTAAGCCCGAAACAACATCTCTCCTAAGGGATGCCTaGGCCTCAATTCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: VGGLCAVMFQLAKPETTSLLRDA*ASIPSL
Trigger: AAGTGAAGGAATTGAGGCCCAGGCATCCCTTAGGAG...AGATGTTGTTTCGGGCTTAGCAAGCTGAAACATCACAGCGCACAGACCTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp AAGGCACTGGGGCAGGATCATCTGGCAAGGAGACAGACATTGCAGCTTCATGAGCTAAGACACATGGACTaGGATGATGGCCACACTATC +
Preference number: 4 (lower is better)
Translates to: KALGQDHLARRQTLQLHELRHMD*DDGHTI
Trigger: GATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG...CTCATGAAGCTGCAATGTCTGTCTCCTTGCCAGATGATCCTGCCCCAGTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CCA 90 bp ACCATCCAGCCCACCAATCACAACTTGCAGCAGTCATCACAGGCGAATGCAGAGGTGCTCCAGGGAGCTTaGATTTACCTGCCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: TIQPTNHNLQQSSQANAEVLQGA*IYLPKV
Trigger: TACTTTTGGCAGGTAAATCCAAGCTCCCTGGAGCAC...CTCTGCATTCGCCTGTGATGACTGCTGCAAGTTGTGATTGGTGGGCTGGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp AACATTTCTCTCTCTTGCAGGATCAGGAAAGGGATGAAATACTGGGTTATACAACTGACTCGGTGGCACTaGTGGGCAGCTCTCGGTCCG +
Preference number: 4 (lower is better)
Translates to: NISLSCRIRKGMKYWVIQLTRWH*WAALGP
Trigger: CGGACCGAGAGCTGCCCAGCAGTGCCACCGAGTCAG...TTGTATAACCCAGTATTTCATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp CAATACCTGAAGAGCAGTAAGCCACCCCTTCAAGAAGGGCCCGCTGAGGAAACAGAGGCTTCACACATGTaGAAAACGCATTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: QYLKSSKPPLQEGPAEETEASHM*KTHLVK
Trigger: CTTGACCAAATGCGTTTTGCACATGTGTGAAGCCTC...TGTTTCCTCAGCGGGCCCTTCTTGAAGGGGTGGCTTACTGCTCTTCAGGTATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp AACATTTCTCTCTCTTGCAGGATCAGGAAAGGGATGAAATACTGGGTTATACAACTGCTGGTCCATCCTTaGCCCACTTGCCCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: NISLSCRIRKGMKYWVIQLLVHP*PTCPRP
Trigger: AGGGCGGGGGCAAGTGGGGCAAGGATGGACCAGCAG...TTGTATAACCCAGTATTTCATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CAA 72 bp AATGCAAAGACCACCATCCAGCCCACCAATCACAACTaGCAGCAGTCATCACAGGCGAATGCAGAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: NAKTTIQPTNHN*QQSSQANAELS
Trigger: ACTTAGCTCTGCATTCGCCTGTGATGACTGCTGCAAGTTGTGATTGGTGGGCTGGATGGTGGTCTTTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR TCA 90 bp AACATTTCTCTCTCTTGCAGGATCAGGAAAGGGATGAAATACTGGGTTATACAAGCCCCCATGCAGTCCTaGCACCTGGTGGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: NISLSCRIRKGMKYWVIQAPMQS*HLVELR
Trigger: CCTCAGTTCCACCAGGTGTCAGGACTGCATGGGGGC...TTGTATAACCCAGTATTTCATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp TGGCCACCTTCTGGCATACCCTCATTTACACAAATCTGGTACATCTTTCTGGGTAGTGGGAACAGGTTGTaGTTGGTGGGCGTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: WPPSGIPSFTQIWYIFLGSGNRL*LVGVEK
Trigger: CTTTTCCACGCCCACCAACCACAACCTGTTCCCACT...ACCCAGAAAGATGTACCAGATTTGTGTAAATGAGGGTATGCCAGAAGGTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp TGGCCACCTTCTGGCATACCCTCATTTACACAAATCTGGTACATCTTTCTGGGTACAGGTTGTGGTTGGTaGGCGTGGAAAAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: WPPSGIPSFTQIWYIFLGTGCGW*AWKSRA
Trigger: AGCTCTACTTTTCCACGCCCACCAACCACAACCTGT...ACCCAGAAAGATGTACCAGATTTGTGTAAATGAGGGTATGCCAGAAGGTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp AACATTTCTCTCTCTTGCAGGATCAGGAAAGGGATGAAATACTGGGTTATACAAGGCACAGGTGACATCTaGGGGTTCCTCAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: NISLSCRIRKGMKYWVIQGTGDI*GFLRPE
Trigger: CTCTGGCCTGAGGAACCCCCAGATGTCACCTGTGCC...TTGTATAACCCAGTATTTCATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp AACATTTCTCTCTCTTGCAGGATCAGGAAAGGGATGAAATACTGGGTTATACAAATCAGCCTGGGCCTCTaGGCACAGGTGACATCTGGG +
Preference number: 4 (lower is better)
Translates to: NISLSCRIRKGMKYWVIQISLGL*AQVTSG
Trigger: CCCAGATGTCACCTGTGCCCAGAGGCCCAGGCTGAT...TTGTATAACCCAGTATTTCATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR GCA 90 bp CAATACCTGAAGAGCAGTAAGCCACCCCTTCAAGAAGGGCCCGCTGAGGAAACAAAGATTTTAATCTGCTaGGCTAAAGAATCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: QYLKSSKPPLQEGPAEETKILIC*AKESLK
Trigger: TTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTT...TGTTTCCTCAGCGGGCCCTTCTTGAAGGGGTGGCTTACTGCTCTTCAGGTATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CAA 72 bp GAGGAAACAGAGGCTTCACACATGTGCAAAACGCATTaGGTCAAGGTCAACATGGCGTCTGTCTTTTCCATT +
Preference number: 4 (lower is better)
Translates to: EETEASHMCKTH*VKVNMASVFSI
Trigger: AATGGAAAAGACAGACGCCATGTTGACCTTGACCAAATGCGTTTTGCACATGTGTGAAGCCTCTGTTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CCA 90 bp CTCGACTGTGGCAAGATTTTAATCTGCTGCGCTAAAGAATCCCTGAAAGCCACCGAACCATGTACAGCATaGAAGCTTGTTGTCAATTTC +
Preference number: 4 (lower is better)
Translates to: LDCGKILICCAKESLKATEPCTA*KLVVNF
Trigger: GAAATTGACAACAAGCTTCCATGCTGTACATGGTTC...GGTGGCTTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTTGCCACAGTCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
3UTR CAA 72 bp AAGAGAGAAAAAGAGAACCATGTACAGCATGGAAGCTaGTTGTCAATTTCTCGACTGTGGCAAGATTTTAAT +
Preference number: 4 (lower is better)
Translates to: KREKENHVQHGS*LSISRLWQDFN
Trigger: ATTAAAATCTTGCCACAGTCGAGAAATTGACAACAAGCTTCCATGCTGTACATGGTTCTCTTTTTCTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS GCA 90 bp TCGAGCAGCAGCAAGGACGCGCCGCCGCGCGCCTCCAGCTCCTCCTaGAGCCACTCGGCGCTCTTGCAGGGCATGGCCCCTGCCCCCGTC +
Preference number: 5 (lower is better)
Translates to: SSSSKDAPPRASSSS*SHSALLQGMAPAPV
Trigger: GACGGGGGCAGGGGCCATGCCCTGCAAGAGCGCCGAGTGGCTGCAGGAGGAGCTGGAGGCGCGCGGCGGCGCGTCCTTGCTGCTGCTCGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp CGGGCCCTGCCCCCAAGGATGGTGAGGGGCGCTCCGACACCGATCAGCCTGGGCGTGGCGAAGCGCTCCTaGTCGGCGTGGTTGGGGATG +
Preference number: 5 (lower is better)
Translates to: RALPPRMVRGAPTPISLGVAKRS*SAWLGM
Trigger: CATCCCCAACCACGCCGACAAGGAGCGCTTCGCCAC...GCCCAGGCTGATCGGTGTCGGAGCGCCCCTCACCATCCTTGGGGGCAGGGCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp ACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCAGCAAGCCCTGCAGTGAGCACGGTGGCCGCCTaGCAGCGCGTGGCGAAGCGC +
Preference number: 5 (lower is better)
Translates to: TPKATCPRAEASPASPAVSTVAA*QRVAKR
Trigger: GCGCTTCGCCACGCGCTGCAAGGCGGCCACCGTGCT...CACTGCAGGGCTTGCTGGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS TCA 90 bp CCTTGCAGCGCGTGGCGAAGCGCTCCTTGTCGGCGTGGTTGGGGATaGTGGAGCGGATGGGCAGGTTGCCCTTGCGCAGGCGGCGCAACA +
Preference number: 5 (lower is better)
Translates to: PCSAWRSAPCRRGWG*WSGWAGCPCAGGAT
Trigger: TGTTGCGCCGCCTGCGCAAGGGCAACCTGCCCATCCGCTCCATCATCCCCAACCACGCCGACAAGGAGCGCTTCGCCACGCGCTGCAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2
CDS TCA 90 bp CTGGACAGGGAAGGCTGGTTGGCTGGATGGCACAGGGCTGCCGTCTaGCTCGGTGGCACTGCTGGGCAGCTCTCGGTCCGACTCGCCGTC +
Preference number: 5 (lower is better)
Translates to: LDREGWLAGWHRAAV*LGGTAGQLSVRLAV
Trigger: GACGGCGAGTCGGACCGAGAGCTGCCCAGCAGTGCCACCGAGTCAGACGGCAGCCCTGTGCCATCCAGCCAACCAGCCTTCCCTGTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2
CDS GCA 90 bp CTGGTTGGCTGGATGGCACAGGGCTGCCGTCTGACTCGGTGGCACTaGTGGGCAGCTCTCGGTCCGACTCGCCGTCGGAGCAGTCAGAGC +
Preference number: 5 (lower is better)
Translates to: LVGWMAQGCRLTRWH*WAALGPTRRRSSQS
Trigger: GCTCTGACTGCTCCGACGGCGAGTCGGACCGAGAGCTGCCCAGCAGTGCCACCGAGTCAGACGGCAGCCCTGTGCCATCCAGCCAACCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2
CDS-3UTR CAA 90 bp GCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCATGCCCCCCCGTGCTCGAAGGCGTaGGGTAGGTTGGGTGTGACA +
Preference number: 5 (lower is better)
Translates to: ALPPSPVESRAGAWCHAPPCSKA*GRLGVT
Trigger: TGTCACACCCAACCTACCCAACGCCTTCGAGCACGG...GGGGGCATGGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGC
68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp CTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCACCCCCACACCTTGCCATGGGCAGGTTGCCCTaGCGCAGGCGGCGCAACATG +
Preference number: 5 (lower is better)
Translates to: LDTATIGKRQPGPPPHLAMGRLP*RRRRNM
Trigger: CATGTTGCGCCGCCTGCGCAAGGGCAACCTGCCCAT...GGCAAGGTGTGGGGGTGGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp GCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGACAGCCAGCACGGTGGCCGCCTaGCAGCGCGTGGCGAAGCGC +
Preference number: 5 (lower is better)
Translates to: ADTKTPSTGHSHHREKTASTVAA*QRVAKR
Trigger: GCGCTTCGCCACGCGCTGCAAGGCGGCCACCGTGCT...GGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp GGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCGAAGAGCTGTCCACGTaGGTCTCGCAGTGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: GLGLSHLALWRAEQGPGAEELST*VSQCSE
Trigger: CTCTGAGCACTGCGAGACCAACGTGGACAGCTCTTC...GGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp ACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCGCACCCCTAGCCCTCTaGACCCAGGGGGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: TKTPSTGHSHHREKTARAAPLAL*TQGVVG
Trigger: GCCCACCACCCCCTGGGTCAAGAGGGCTAGGGGTGC...GGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp CGGGCCCTGCCCCCAAGGATGGTGAGGGGCGCTCCGACACCGATCAGCCTGGGCTTGAGTGGGAACAGGTaGTGGTTGGTGGGCGTGGAA +
Preference number: 5 (lower is better)
Translates to: RALPPRMVRGAPTPISLGLSGNR*WLVGVE
Trigger: TTCCACGCCCACCAACCACAACCTGTTCCCACTCAA...GCCCAGGCTGATCGGTGTCGGAGCGCCCCTCACCATCCTTGGGGGCAGGGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp GTCCATCCTTGCCCCACTTGCCCCCGCCCTAGGGTTGAAATGGGTGCAAGTCTCCTGCAGTGGGAGACCTaGCCTGCGGGCCCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: VHPCPTCPRPRVEMGASLLQWET*PAGPAP
Trigger: GGGGGCAGGGCCCGCAGGCAAGGTCTCCCACTGCAG...GAGACTTGCACCCATTTCAACCCTAGGGCGGGGGCAAGTGGGGCAAGGATGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS GCA 90 bp GCAGGATCTGGACAGGGAAGGCTGGTTGGCTGGATGGCACAGGGCTaGCGTCTGACTCGGTGGCACTGCTGGGCAGCTCTCGGTCCGACT +
Preference number: 5 (lower is better)
Translates to: AGSGQGRLVGWMAQG*RLTRWHCWAALGPT
Trigger: AGTCGGACCGAGAGCTGCCCAGCAGTGCCACCGAGTCAGACGGCAGCCCTGTGCCATCCAGCCAACCAGCCTTCCCTGTCCAGATCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2
CDS-3UTR CAA 90 bp ACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCAGCAAGCCCTGCAGTGATGGGCAGGTTGCCCTaGCGCAGGCGGCGCAACATG +
Preference number: 5 (lower is better)
Translates to: TPKATCPRAEASPASPAVMGRLP*RRRRNM
Trigger: CATGTTGCGCCGCCTGCGCAAGGGCAACCTGCCCAT...CACTGCAGGGCTTGCTGGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp GATGAGGCCCTGGTGGACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCGACAGGGAAGGCTGGTaGGCTGGATGGCACAGGGCT +
Preference number: 5 (lower is better)
Translates to: DEALVDAQSHVSKSRGLSDREGW*AGWHRA
Trigger: AGCCCTGTGCCATCCAGCCAACCAGCCTTCCCTGTC...GGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp GCCCAGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGACCCCACCCCTGCCACTaGCTAGACCTTCCTCAGGAG +
Preference number: 5 (lower is better)
Translates to: AQPSRHQNALHWTQPPSGPHPCH*LDLPQE
Trigger: CTCCTGAGGAAGGTCTAGCAAGTGGCAGGGGTGGGG...TCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp CGGGCCCTGCCCCCAAGGATGGTGAGGGGCGCTCCGACACCGATCAGCCTGGGCGAGCTCAAACACTCTTaGTGCTCCAGGGAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: RALPPRMVRGAPTPISLGELKHS*CSRELG
Trigger: TCCAAGCTCCCTGGAGCACAAAGAGTGTTTGAGCTC...GCCCAGGCTGATCGGTGTCGGAGCGCCCCTCACCATCCTTGGGGGCAGGGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp GCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCATGCCCCCCCCACCAATCACAACTaGCAGCAGTCATCACAGGCG +
Preference number: 5 (lower is better)
Translates to: ALPPSPVESRAGAWCHAPPTNHN*QQSSQA
Trigger: CGCCTGTGATGACTGCTGCAAGTTGTGATTGGTGGG...GGGGGCATGGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGC
66% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp GCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCATGCCCCCCTTGTTGAAACCACCTaGGAGGTAGTAGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: ALPPSPVESRAGAWCHAPLVETT*EVVGLA
Trigger: TGCCAGGCCTACTACCTCCAAGGTGGTTTCAACAAG...GGGGGCATGGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp ACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCCCGAGCACGTCCAGGTaGGTGGAGTCCTTGGCGCAG +
Preference number: 5 (lower is better)
Translates to: TKTPSTGHSHHREKTARAPSTSR*VESLAQ
Trigger: CTGCGCCAAGGACTCCACCAACCTGGACGTGCTCGG...GGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp GCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCATGCCCCCTACTTGATGCCATACTaGCCGAGCACGTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: ALPPSPVESRAGAWCHAPYLMPY*PSTSRL
Trigger: CAACCTGGACGTGCTCGGCAAGTATGGCATCAAGTA...GGGGGCATGGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp GGGCTTGGGCTCTCCCACCTAGCCCTGTGGAGAGCCGAGCAGGGGCCTGGTGCCTGTGCTCCAGGGAGCTaGGATTTACCTGCCAAAAGT +
Preference number: 5 (lower is better)
Translates to: GLGLSHLALWRAEQGPGACAPGS*DLPAKS
Trigger: ACTTTTGGCAGGTAAATCCAAGCTCCCTGGAGCACA...GGCACCAGGCCCCTGCTCGGCTCTCCACAGGGCTAGGTGGGAGAGCCCAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp ACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCTCCTTGTCGGCGTGGTaGGGGATGATGGAGCGGATG +
Preference number: 5 (lower is better)
Translates to: TKTPSTGHSHHREKTARASLSAW*GMMERM
Trigger: CATCCGCTCCATCATCCCCAACCACGCCGACAAGGA...GGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp GTCCATCCTTGCCCCACTTGCCCCCGCCCTAGGGTTGAAATGGGTGCAAGTCTCTCACTCGACGCGTGGTaGTCGCACGGGCTGCTTAGC +
Preference number: 5 (lower is better)
Translates to: VHPCPTCPRPRVEMGASLSLDAW*SHGLLS
Trigger: GCTAAGCAGCCCGTGCGACAACCACGCGTCGAGTGA...GAGACTTGCACCCATTTCAACCCTAGGGCGGGGGCAAGTGGGGCAAGGATGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp GATGAGGCCCTGGTGGACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCGTGGACTCCAGCGTATaGAGTGGGAACAGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: DEALVDAQSHVSKSRGLSVDSSV*SGNRLW
Trigger: CCACAACCTGTTCCCACTCAATACGCTGGAGTCCAC...GGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp CTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCACCCCCACACCTTGCCCTTGTTGAAACCACCTaGGAGGTAGTAGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: LDTATIGKRQPGPPPHLALVETT*EVVGLA
Trigger: TGCCAGGCCTACTACCTCCAAGGTGGTTTCAACAAG...GGCAAGGTGTGGGGGTGGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp CTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCACCCCCACACCTTGCCGCAAGGAGACAGACATaGCAGCTTCATGAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LDTATIGKRQPGPPPHLAARRQT*QLHEEL
Trigger: CAGCTCCTCATGAAGCTGCAATGTCTGTCTCCTTGC...GGCAAGGTGTGGGGGTGGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCAGAGCGGATGGGCAGGTaGCCCTTGCGCAGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: LRHMDWDDGHTITCDGASERMGR*PLRRRR
Trigger: GCGCCGCCTGCGCAAGGGCAACCTGCCCATCCGCTC...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp CACAACTTGCAGCAGTCATCACAGGCGAATGCAGAGCTAAGTCAGACTGGGCCACCGAGCACGTCCAGGTaGGTGGAGTCCTTGGCGCAG +
Preference number: 5 (lower is better)
Translates to: HNLQQSSQANAELSQTGPPSTSR*VESLAQ
Trigger: CTGCGCCAAGGACTCCACCAACCTGGACGTGCTCGG...TGGCCCAGTCTGACTTAGCTCTGCATTCGCCTGTGATGACTGCTGCAAGTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp ACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGACAGCCCGGGCCTACTTGATGCCATACTaGCCGAGCACGTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: TKTPSTGHSHHREKTARAYLMPY*PSTSRL
Trigger: CAACCTGGACGTGCTCGGCAAGTATGGCATCAAGTA...GGCCCGGGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp GCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGACAGCCGCCAGGCACCTACTTTaGGTTCCCAGTAAGCGGATG +
Preference number: 5 (lower is better)
Translates to: ADTKTPSTGHSHHREKTAARHLL*VPSKRM
Trigger: CATCCGCTTACTGGGAACCAAAAGTAGGTGCCTGGC...GGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp GATGAGGCCCTGGTGGACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCATGTGCAAAACGCATTaGGTCAAGGTCAACATGGCG +
Preference number: 5 (lower is better)
Translates to: DEALVDAQSHVSKSRGLSMCKTH*VKVNMA
Trigger: CGCCATGTTGACCTTGACCAAATGCGTTTTGCACAT...GGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp TGGCCACCTTCTGGCATACCCTCATTTACACAAATCTGGTACATCTTTCTGGGTGAGCGGATGGGCAGGTaGCCCTTGCGCAGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: WPPSGIPSFTQIWYIFLGERMGR*PLRRRR
Trigger: GCGCCGCCTGCGCAAGGGCAACCTGCCCATCCGCTC...ACCCAGAAAGATGTACCAGATTTGTGTAAATGAGGGTATGCCAGAAGGTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCAGTGGCGAAGCGCTCCTaGTCGGCGTGGTTGGGGATG +
Preference number: 5 (lower is better)
Translates to: LRHMDWDDGHTITCDGASVAKRS*SAWLGM
Trigger: CATCCCCAACCACGCCGACAAGGAGCGCTTCGCCAC...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp GCCCAGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGACTCAGAGTACTCTGTTaGAAACTTGTTGAAACCACC +
Preference number: 5 (lower is better)
Translates to: AQPSRHQNALHWTQPPSGLRVLC*KLVETT
Trigger: GGTGGTTTCAACAAGTTTCAAACAGAGTACTCTGAG...TCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp ACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCAGCAAGCCCTGCAGTGAGGTTGGGTGTGACATaGAGGATATACTTGATGCCA +
Preference number: 5 (lower is better)
Translates to: TPKATCPRAEASPASPAVRLGVT*RIYLMP
Trigger: TGGCATCAAGTATATCCTCAATGTCACACCCAACCT...CACTGCAGGGCTTGCTGGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp GTGGGAGGTCTGTGCGCTGTGATGTTTCAGCTTGCTAAGCCCGAAACAACATCTGCTGGGCTGGTTCTCTaGGAGCCGCTCCCATGGGTT +
Preference number: 5 (lower is better)
Translates to: VGGLCAVMFQLAKPETTSAGLVL*EPLPWV
Trigger: AACCCATGGGAGCGGCTCCAAGAGAACCAGCCCAGC...AGATGTTGTTTCGGGCTTAGCAAGCTGAAACATCACAGCGCACAGACCTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp TGGCCACCTTCTGGCATACCCTCATTTACACAAATCTGGTACATCTTTCTGGGTAGCCACTCGGCGCTCTaGCAGGGCATGGCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: WPPSGIPSFTQIWYIFLGSHSAL*QGMAPA
Trigger: GGCAGGGGCCATGCCCTGCAAGAGCGCCGAGTGGCT...ACCCAGAAAGATGTACCAGATTTGTGTAAATGAGGGTATGCCAGAAGGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp TGCCACTTGCTAGACCTTCCTCAGGAGGCCCATGTGTCAGTGATATCTCCTACCGAAGAGCTGTCCACGTaGGTCTCGCAGTGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: CHLLDLPQEAHVSVISPTEELST*VSQCSE
Trigger: CTCTGAGCACTGCGAGACCAACGTGGACAGCTCTTC...GGTAGGAGATATCACTGACACATGGGCCTCCTGAGGAAGGTCTAGCAAGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCAGACAGGGAAGGCTGGTaGGCTGGATGGCACAGGGCT +
Preference number: 5 (lower is better)
Translates to: LRHMDWDDGHTITCDGASDREGW*AGWHRA
Trigger: AGCCCTGTGCCATCCAGCCAACCAGCCTTCCCTGTC...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp GCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGACAGCCAGGTTGGGTGTGACATaGAGGATATACTTGATGCCA +
Preference number: 5 (lower is better)
Translates to: ADTKTPSTGHSHHREKTARLGVT*RIYLMP
Trigger: TGGCATCAAGTATATCCTCAATGTCACACCCAACCT...GGCTGTCTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCACCGTGCTCGAAGGCGTaGGGTAGGTTGGGTGTGACA +
Preference number: 5 (lower is better)
Translates to: LRHMDWDDGHTITCDGASPCSKA*GRLGVT
Trigger: TGTCACACCCAACCTACCCAACGCCTTCGAGCACGG...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp GTGGGAGGTCTGTGCGCTGTGATGTTTCAGCTTGCTAAGCCCGAAACAACATCTGCCTCCCACTTCCTGTaGTTAAAGCTAGCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: VGGLCAVMFQLAKPETTSASHFL*LKLAQP
Trigger: GGGCTGGGCTAGCTTTAACAACAGGAAGTGGGAGGC...AGATGTTGTTTCGGGCTTAGCAAGCTGAAACATCACAGCGCACAGACCTCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp GATGAGGCCCTGGTGGACGCCCAAAGCCACGTGTCCAAGAGCCGAGGCCTCTCCAACAAAGTCCCGTTGTaGGTTCGGGATATATATATA +
Preference number: 5 (lower is better)
Translates to: DEALVDAQSHVSKSRGLSNKVPL*VRDIYI
Trigger: TATATATATATCCCGAACCAACAACGGGACTTTGTT...GGAGAGGCCTCGGCTCTTGGACACGTGGCTTTGGGCGTCCACCAGGGCCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCAGGCTGGGCAGAAACATaGGGTCACCAGGCTCAGAGA +
Preference number: 5 (lower is better)
Translates to: LRHMDWDDGHTITCDGASGWAET*GHQAQR
Trigger: TCTCTGAGCCTGGTGACCCAATGTTTCTGCCCAGCC...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp AGCCCAGCCGACACCAAAACGCCCTCCACTGGACACAGCCACCATCGGGAAAAGCCTCAATTCCTTCACTaGTCAAATGAGGAAAAAGGT +
Preference number: 5 (lower is better)
Translates to: SPADTKTPSTGHSHHREKPQFLH*SNEEKG
Trigger: ACCTTTTTCCTCATTTGACAAGTGAAGGAATTGAGG...CTTTTCCCGATGGTGGCTGTGTCCAGTGGAGGGCGTTTTGGTGTCGGCTGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp AACATTTCTCTCTCTTGCAGGATCAGGAAAGGGATGAAATACTGGGTTATACAATCTGCTGGTCCATCCTaGCCCCACTTGCCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: NISLSCRIRKGMKYWVIQSAGPS*PHLPPP
Trigger: GGGCGGGGGCAAGTGGGGCAAGGATGGACCAGCAGA...TTGTATAACCCAGTATTTCATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp GTCCATCCTTGCCCCACTTGCCCCCGCCCTAGGGTTGAAATGGGTGCAAGTCTCATAAACAAAGTCCCGTaGTTGGTTCGGGATATATAT +
Preference number: 5 (lower is better)
Translates to: VHPCPTCPRPRVEMGASLINKVP*LVRDIY
Trigger: ATATATATCCCGAACCAACAACGGGACTTTGTTTAT...GAGACTTGCACCCATTTCAACCCTAGGGCGGGGGCAAGTGGGGCAAGGATGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp TGCCACTTGCTAGACCTTCCTCAGGAGGCCCATGTGTCAGTGATATCTCCTACCACATTGAGGATATACTaGATGCCATACTTGCCGAGC +
Preference number: 5 (lower is better)
Translates to: CHLLDLPQEAHVSVISPTTLRIY*MPYLPS
Trigger: GCTCGGCAAGTATGGCATCAAGTATATCCTCAATGT...GGTAGGAGATATCACTGACACATGGGCCTCCTGAGGAAGGTCTAGCAAGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp CAATACCTGAAGAGCAGTAAGCCACCCCTTCAAGAAGGGCCCGCTGAGGAAACAACATTGAGGATATACTaGATGCCATACTTGCCGAGC +
Preference number: 5 (lower is better)
Translates to: QYLKSSKPPLQEGPAEETTLRIY*MPYLPS
Trigger: GCTCGGCAAGTATGGCATCAAGTATATCCTCAATGT...TGTTTCCTCAGCGGGCCCTTCTTGAAGGGGTGGCTTACTGCTCTTCAGGTATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp TGGCCACCTTCTGGCATACCCTCATTTACACAAATCTGGTACATCTTTCTGGGTAGGACACCACACTTCTaGGAGCGGGCTTCGTCAATG +
Preference number: 5 (lower is better)
Translates to: WPPSGIPSFTQIWYIFLGRTPHF*ERASSM
Trigger: CATTGACGAAGCCCGCTCCAAGAAGTGTGGTGTCCT...ACCCAGAAAGATGTACCAGATTTGTGTAAATGAGGGTATGCCAGAAGGTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp ACCATCCAGCCCACCAATCACAACTTGCAGCAGTCATCACAGGCGAATGCAGAGGAACATTTCTCTCTCTaGCAGGATCAGGAAAGGGAT +
Preference number: 5 (lower is better)
Translates to: TIQPTNHNLQQSSQANAEEHFSL*QDQERD
Trigger: ATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTTC...CTCTGCATTCGCCTGTGATGACTGCTGCAAGTTGTGATTGGTGGGCTGGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp CTAAGACACATGGACTGGGATGATGGCCACACTATCACTTGTGATGGGGCTTCACTGCTGGCTTTATTTTaGGCCTTTTCAGGGTGTAGC +
Preference number: 5 (lower is better)
Translates to: LRHMDWDDGHTITCDGASLLALF*AFSGCS
Trigger: GCTACACCCTGAAAAGGCCAAAAATAAAGCCAGCAG...TGAAGCCCCATCACAAGTGATAGTGTGGCCATCATCCCAGTCCATGTGTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469623.1
CDS-3UTR CAA 90 bp CTCGACTGTGGCAAGATTTTAATCTGCTGCGCTAAAGAATCCCTGAAAGCCACCCAGCATGGAAGCTTGTaGTCAATTTCTCGACTGTGG +
Preference number: 5 (lower is better)
Translates to: LDCGKILICCAKESLKATQHGSL*SISRLW
Trigger: CCACAGTCGAGAAATTGACAACAAGCTTCCATGCTG...GGTGGCTTTCAGGGATTCTTTAGCGCAGCAGATTAAAATCTTGCCACAGTCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp AACATTTCTCTCTCTTGCAGGATCAGGAAAGGGATGAAATACTGGGTTATACAAGTACAGCATGGAAGCTaGTTGTCAATTTCTCGACTG +
Preference number: 5 (lower is better)
Translates to: NISLSCRIRKGMKYWVIQVQHGS*LSISRL
Trigger: CAGTCGAGAAATTGACAACAAGCTTCCATGCTGTAC...TTGTATAACCCAGTATTTCATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS-3UTR CAA 90 bp AACATTTCTCTCTCTTGCAGGATCAGGAAAGGGATGAAATACTGGGTTATACAACTCAGAGTACTCTGTTaGAAACTTGTTGAAACCACC +
Preference number: 5 (lower is better)
Translates to: NISLSCRIRKGMKYWVIQLRVLC*KLVETT
Trigger: GGTGGTTTCAACAAGTTTCAAACAGAGTACTCTGAG...TTGTATAACCCAGTATTTCATCCCTTTCCTGATCCTGCAAGAGAGAGAAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS GCA 72 bp CCGTGGCCTCGTCGTAGAGCAGCACGGTGGCCGCCTTaGAGCGCGTGGCGAAGCGCTCCTTGTCGGCGTGGT +
Preference number: 6 (lower is better)
Translates to: PWPRRRAARWPP*SAWRSAPCRRG
Trigger: ACCACGCCGACAAGGAGCGCTTCGCCACGCGCTGCAAGGCGGCCACCGTGCTGCTCTACGACGAGGCCACGG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2
CDS CCA 72 bp GCCACTCGGCCGTGGCCTCGTCGTAGAGCAGCACGGTaGCCGCCTTGCAGCGCGTGGCGAAGCGCTCCTTGT +
Preference number: 6 (lower is better)
Translates to: ATRPWPRRRAAR*PPCSAWRSAPC
Trigger: ACAAGGAGCGCTTCGCCACGCGCTGCAAGGCGGCCACCGTGCTGCTCTACGACGAGGCCACGGCCGAGTGGC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2
CDS CAA 90 bp GTGGCCGCCTTGCAGCGCGTGGCGAAGCGCTCCTTGTCGGCGTGGTaGGGGATGATGGAGCGGATGGGCAGGTTGCCCTTGCGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: VAALQRVAKRSLSAW*GMMERMGRLPLRRR
Trigger: CCGCCTGCGCAAGGGCAACCTGCCCATCCGCTCCATCATCCCCAACCACGCCGACAAGGAGCGCTTCGCCACGCGCTGCAAGGCGGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2
CDS GCA 72 bp TGGATGGCACAGGGCTGCCGTCTGACTCGGTGGCACTaGTGGGCAGCTCTCGGTCCGACTCGCCGTCGGAGC +
Preference number: 6 (lower is better)
Translates to: WMAQGCRLTRWH*WAALGPTRRRS
Trigger: GCTCCGACGGCGAGTCGGACCGAGAGCTGCCCAGCAGTGCCACCGAGTCAGACGGCAGCCCTGTGCCATCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2
CDS CAA 72 bp ACGGTGGCCGCCTTGCAGCGCGTGGCGAAGCGCTCCTaGTCGGCGTGGTTGGGGATGATGGAGCGGATGGGC +
Preference number: 6 (lower is better)
Translates to: TVAALQRVAKRS*SAWLGMMERMG
Trigger: GCCCATCCGCTCCATCATCCCCAACCACGCCGACAAGGAGCGCTTCGCCACGCGCTGCAAGGCGGCCACCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2
CDS TCA 72 bp GCGTGGCGAAGCGCTCCTTGTCGGCGTGGTTGGGGATaGTGGAGCGGATGGGCAGGTTGCCCTTGCGCAGGC +
Preference number: 6 (lower is better)
Translates to: AWRSAPCRRGWG*WSGWAGCPCAG
Trigger: GCCTGCGCAAGGGCAACCTGCCCATCCGCTCCATCATCCCCAACCACGCCGACAAGGAGCGCTTCGCCACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2
CDS CCA 72 bp ATGGCACAGGGCTGCCGTCTGACTCGGTGGCACTGCTaGGCAGCTCTCGGTCCGACTCGCCGTCGGAGCAGT +
Preference number: 6 (lower is better)
Translates to: MAQGCRLTRWHC*AALGPTRRRSS
Trigger: ACTGCTCCGACGGCGAGTCGGACCGAGAGCTGCCCAGCAGTGCCACCGAGTCAGACGGCAGCCCTGTGCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2
CDS CCA 72 bp GTTGGCTGGATGGCACAGGGCTGCCGTCTGACTCGGTaGCACTGCTGGGCAGCTCTCGGTCCGACTCGCCGT +
Preference number: 6 (lower is better)
Translates to: VGWMAQGCRLTR*HCWAALGPTRR
Trigger: ACGGCGAGTCGGACCGAGAGCTGCCCAGCAGTGCCACCGAGTCAGACGGCAGCCCTGTGCCATCCAGCCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2
CDS TCA 72 bp GAAGGCTGGTTGGCTGGATGGCACAGGGCTGCCGTCTaGCTCGGTGGCACTGCTGGGCAGCTCTCGGTCCGA +
Preference number: 6 (lower is better)
Translates to: EGWLAGWHRAAV*LGGTAGQLSVR
Trigger: TCGGACCGAGAGCTGCCCAGCAGTGCCACCGAGTCAGACGGCAGCCCTGTGCCATCCAGCCAACCAGCCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2
CDS GCA 72 bp GGACAGGGAAGGCTGGTTGGCTGGATGGCACAGGGCTaGCGTCTGACTCGGTGGCACTGCTGGGCAGCTCTC +
Preference number: 6 (lower is better)
Translates to: GQGRLVGWMAQG*RLTRWHCWAAL
Trigger: GAGAGCTGCCCAGCAGTGCCACCGAGTCAGACGGCAGCCCTGTGCCATCCAGCCAACCAGCCTTCCCTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2
CDS CAA 72 bp TTGCAGCGCGTGGCGAAGCGCTCCTTGTCGGCGTGGTaGGGGATGATGGAGCGGATGGGCAGGTTGCCCTTG +
Preference number: 6 (lower is better)
Translates to: LQRVAKRSLSAW*GMMERMGRLPL
Trigger: CAAGGGCAACCTGCCCATCCGCTCCATCATCCCCAACCACGCCGACAAGGAGCGCTTCGCCACGCGCTGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2
CDS CAA 72 bp CCCCCGTGCACCAGGCCTCACGTGGACTCCAGCGTATaGAGTGGGAACAGGTTGTGGTTGGTGGGCGTGGAA +
Preference number: 6 (lower is better)
Translates to: PPCTRPHVDSSV*SGNRLWLVGVE
Trigger: TTCCACGCCCACCAACCACAACCTGTTCCCACTCAATACGCTGGAGTCCACGTGAGGCCTGGTGCACGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS TCA 72 bp CCCCGTGCACCAGGCCTCACGTGGACTCCAGCGTATTaGGTGGGAACAGGTTGTGGTTGGTGGGCGTGGAAA +
Preference number: 6 (lower is better)
Translates to: PRAPGLTWTPAY*VGTGCGWWAWK
Trigger: TTTCCACGCCCACCAACCACAACCTGTTCCCACTCAATACGCTGGAGTCCACGTGAGGCCTGGTGCACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS CAA 72 bp ATGCCTGCCAGGCAGTGCACCAGGACACCACACTTCTaGGAGCGGGCTTCGTCAATGAAGCTGATGGCCTCA +
Preference number: 6 (lower is better)
Translates to: MPARQCTRTPHF*ERASSMKLMAS
Trigger: TGAGGCCATCAGCTTCATTGACGAAGCCCGCTCCAAGAAGTGTGGTGTCCTGGTGCACTGCCTGGCAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS CCA 72 bp GTGGCGAGCTGCTCGGCGAGGAAGAGCTGTCCACGTTaGTCTCGCAGTGCTCAGAGTACTCTGTTTGAAACT +
Preference number: 6 (lower is better)
Translates to: VASCSARKSCPR*SRSAQSTLFET
Trigger: AGTTTCAAACAGAGTACTCTGAGCACTGCGAGACCAACGTGGACAGCTCTTCCTCGCCGAGCAGCTCGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2
CDS CCA 72 bp GTGCACCAGGCCTCACGTGGACTCCAGCGTATTGAGTaGGAACAGGTTGTGGTTGGTGGGCGTGGAAAAGTA +
Preference number: 6 (lower is better)
Translates to: VHQASRGLQRIE*EQVVVGGRGKV
Trigger: TACTTTTCCACGCCCACCAACCACAACCTGTTCCCACTCAATACGCTGGAGTCCACGTGAGGCCTGGTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495880.2
CDS CAA 72 bp CCGTGCTCGAAGGCGTTGGGTAGGTTGGGTGTGACATaGAGGATATACTTGATGCCATACTTGCCGAGCACG +
Preference number: 6 (lower is better)
Translates to: PCSKALGRLGVT*RIYLMPYLPST
Trigger: CGTGCTCGGCAAGTATGGCATCAAGTATATCCTCAATGTCACACCCAACCTACCCAACGCCTTCGAGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469623.1
ENST00000495880.2