RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DUSP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000108861

Ensembl transcript IDs: ENST00000226004.8, ENST00000590342.1, ENST00000590753.1, ENST00000590935.1, ENST00000591618.1

Found 526 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTaGCGTGGGCCATCGGGAAGCATGCAGGCCACAGGCCTTCCCCCT +
Preference number: 1 (lower is better)
Translates to: GTSVSILGLTLPHTS*RGPSGSMQATGLPP
Trigger: AGGGGGAAGGCCTGTGGCCTGCATGCTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR CCA 90 bp AGCTTCGGACCTCAAGACGTGAGAGGGCTGCCTATGCACAGGGTGTaGAAGGCTGTGGGGACAGTGCAGGGCACAGACGTGGTGGGGAGA +
Preference number: 1 (lower is better)
Translates to: SFGPQDVRGLPMHRV*KAVGTVQGTDVVGR
Trigger: TCTCCCCACCACGTCTGTGCCCTGCACTGTCCCCACAGCCTTCCACACCCTGTGCATAGGCAGCCCTCTCACGTCTTGAGGTCCGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR GCA 90 bp GCTGTGGGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTaGATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCC +
Preference number: 1 (lower is better)
Translates to: AVGTVQGTDVVGRVA*ICIVPLLGLKVLRS
Trigger: GGACCTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR GCA 90 bp GGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTaGATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTC +
Preference number: 1 (lower is better)
Translates to: GTVQGTDVVGRVACI*IVPLLGLKVLRSTL
Trigger: GAGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR CCA 90 bp GGCCTTACGCCACACCTGCCTCTCCGTGTCCCAGCCAGGAGCTCCTaGCCAACTCTGAAAAAGGCACATTCCCTACCTTGGCATATTAAC +
Preference number: 1 (lower is better)
Translates to: GLTPHLPLRVPARSS*PTLKKAHSLPWHIN
Trigger: GTTAATATGCCAAGGTAGGGAATGTGCCTTTTTCAGAGTTGGCCAGGAGCTCCTGGCTGGGACACGGAGAGGCAGGTGTGGCGTAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR TCA 90 bp GGTCCACACTCAAGAGAGGATTCGGGAGTTGGGGAAGGGAGGTCATaGGGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACC +
Preference number: 1 (lower is better)
Translates to: GPHSREDSGVGEGRS*GTSVSILGLTLPHT
Trigger: GGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCATGACCTCCCTTCCCCAACTCCCGAATCCTCTCTTGAGTGTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR GCA 90 bp CCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTaGCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAG +
Preference number: 1 (lower is better)
Translates to: PPIKDPFGHSAMSHV*LAESLQGSRAGTRE
Trigger: CTCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR CCA 90 bp GGGAGCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTATGGAGCTaGACAACCCTGGGGGCCAGGCCCTTAATCATTCTGAACCTCAGT +
Preference number: 1 (lower is better)
Translates to: GSSKPKILPSSTLWS*TTLGARPLIILNLS
Trigger: ACTGAGGTTCAGAATGATTAAGGGCCTGGCCCCCAGGGTTGTCCAGCTCCATAAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR TCA 90 bp CATTCAAATGCAGCCTTGCTGTGGGAATCTCCATCCACTAATAACTaGCGGACACCCCCACCCCAGCTTCGGACCTCAAGACGTGAGAGG +
Preference number: 1 (lower is better)
Translates to: HSNAALLWESPSTNN*RTPPPQLRTSRRER
Trigger: CCTCTCACGTCTTGAGGTCCGAAGCTGGGGTGGGGGTGTCCGTCAGTTATTAGTGGATGGAGATTCCCACAGCAAGGCTGCATTTGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR TCA 90 bp AAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCTaGGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGCTGTAAGA +
Preference number: 1 (lower is better)
Translates to: KGSIWTLRHVSCLPG*VTSGIPCWHQRAVR
Trigger: TCTTACAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR CCA 90 bp TTTTGCCTGGATGGTGCTCTGTCAGTCAAAGAAAGGGAACAGGTCTaGGGAGGGGGTAAGGGCACCCTGAGTTCCTGTTCCATCACTTCC +
Preference number: 1 (lower is better)
Translates to: FCLDGALSVKEREQV*GGGKGTLSSCSITS
Trigger: GGAAGTGATGGAACAGGAACTCAGGGTGCCCTTACCCCCTCCCCAGACCTGTTCCCTTTCTTTGACTGACAGAGCACCATCCAGGCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR GCA 90 bp AAAGAGCTGCACATTCTAGCCTATGAGGGACCCACCCTTTTCACTTaGTTCTCCGGGGCTGGATTGAGGGTAAGTGCAGTACACCTGGAG +
Preference number: 1 (lower is better)
Translates to: KELHILAYEGPTLFT*FSGAGLRVSAVHLE
Trigger: CTCCAGGTGTACTGCACTTACCCTCAATCCAGCCCCGGAGAAGCAAGTGAAAAGGGTGGGTCCCTCATAGGCTAGAATGTGCAGCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR CCA 90 bp GGCACAAAAGGCACCAACATTCCCTTTCCAAACCATCCATCACCATaGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGGCTCA +
Preference number: 1 (lower is better)
Translates to: GTKGTNIPFPNHPSP*VEGSATCCPSYYGS
Trigger: TGAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
3UTR TCA 90 bp GAGGGTAAGTGCAGTACACCTGGAGATCCCAGGGAGCCCCCTTCTTaGGAAAGAGTATCGTATGAAAGAATCCAGCTTCAGGGAGCAGCA +
Preference number: 1 (lower is better)
Translates to: EGKCSTPGDPREPPS*ERVSYERIQLQGAA
Trigger: TGCTGCTCCCTGAAGCTGGATTCTTTCATACGATACTCTTTCTCAAGAAGGGGGCTCCCTGGGATCTCCAGGTGTACTGCACTTACCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR GCA 90 bp CCCAAAGTAAAGGCAGTAATTCTCCCAATGGCCTTTTCTCCCTCATaGCCCCACAGAGACTTTCGAGAGGTCCTAGTTAGCCAGCCACAC +
Preference number: 1 (lower is better)
Translates to: PKVKAVILPMAFSPS*PHRDFREVLVSQPH
Trigger: GTGTGGCTGGCTAACTAGGACCTCTCGAAAGTCTCTGTGGGGGCATGAGGGAGAAAAGGCCATTGGGAGAATTACTGCCTTTACTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR GCA 90 bp CCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTaGTGCCCATCATATTATGGCTCACATACCCATAATTTCCTTGCG +
Preference number: 1 (lower is better)
Translates to: PFPNHPSPWVEGSAT*CPSYYGSHTHNFLA
Trigger: CGCAAGGAAATTATGGGTATGTGAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
3UTR TCA 90 bp ACCTGGAGATCCCAGGGAGCCCCCTTCTTGAGAAAGAGTATCGTATaGAAGAATCCAGCTTCAGGGAGCAGCAAACCCAAAATCTTGCCC +
Preference number: 1 (lower is better)
Translates to: TWRSQGAPFLRKSIV*KNPASGSSKPKILP
Trigger: GGGCAAGATTTTGGGTTTGCTGCTCCCTGAAGCTGGATTCTTTCATACGATACTCTTTCTCAAGAAGGGGGCTCCCTGGGATCTCCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR GCA 90 bp TTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTaGCCATCATATTATGGCTCACATACCCATAATTTCCTTGCGGTG +
Preference number: 1 (lower is better)
Translates to: FPNHPSPWVEGSATC*PSYYGSHTHNFLAV
Trigger: CACCGCAAGGAAATTATGGGTATGTGAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
3UTR CCA 90 bp CAAAAGGCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTaGAAGGCAGCGCCACCTGCTGCCCATCATATTATGGCTCACATA +
Preference number: 1 (lower is better)
Translates to: QKAPTFPFQTIHHHG*KAAPPAAHHIMAHI
Trigger: TATGTGAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
3UTR GCA 90 bp TTTTTCACTATCTGGAGAAGAAGACACATACTGGTTGTTCAGGGCTaGTGTGGTCACAGAGAAAAGCGGACAGCAAATGACCAGGCTGGG +
Preference number: 1 (lower is better)
Translates to: FFTIWRRRHILVVQG*CGHREKRTANDQAG
Trigger: CCCAGCCTGGTCATTTGCTGTCCGCTTTTCTCTGTGACCACAGCAGCCCTGAACAACCAGTATGTGTCTTCTTCTCCAGATAGTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR CCA 90 bp ATGAGTCCCCTCATTTGTAGGTGGTGGTTTCTGGATAACTCAGAGTaGCAGGGACACAGACGAGCCTGTGGAAAGGTATACTGCTTTAAG +
Preference number: 1 (lower is better)
Translates to: MSPLICRWWFLDNSE*QGHRRACGKVYCFK
Trigger: CTTAAAGCAGTATACCTTTCCACAGGCTCGTCTGTGTCCCTGCCACTCTGAGTTATCCAGAAACCACCACCTACAAATGAGGGGACTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR CCA 90 bp CCTTCACAAGGCCTTGCGAGTGATCCTACCATGAATTCAGTCTTCTaGGAGCGTGACACACCCACCAGAACAATGCCCTATATATATTTG +
Preference number: 1 (lower is better)
Translates to: PSQGLASDPTMNSVF*ERDTPTRTMPYIYL
Trigger: CAAATATATATAGGGCATTGTTCTGGTGGGTGTGTCACGCTCCCAGAAGACTGAATTCATGGTAGGATCACTCGCAAGGCCTTGTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR CCA 90 bp GCCATTTCACTTAGGTGGGTTTATCTGGACACCTTTTTCACTATCTaGAGAAGAAGACACATACTGGTTGTTCAGGGCTGCTGTGGTCAC +
Preference number: 1 (lower is better)
Translates to: AISLRWVYLDTFFTI*RRRHILVVQGCCGH
Trigger: GTGACCACAGCAGCCCTGAACAACCAGTATGTGTCTTCTTCTCCAGATAGTGAAAAAGGTGTCCAGATAAACCCACCTAAGTGAAATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR GCA 90 bp AACTCAGAGTGGCAGGGACACAGACGAGCCTGTGGAAAGGTATACTaGTTTAAGATTGAGAAGAAAACCATTTGGCGCTCTAATTTTGCC +
Preference number: 1 (lower is better)
Translates to: NSEWQGHRRACGKVY*FKIEKKTIWRSNFA
Trigger: GGCAAAATTAGAGCGCCAAATGGTTTTCTTCTCAATCTTAAAGCAGTATACCTTTCCACAGGCTCGTCTGTGTCCCTGCCACTCTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR CCA 90 bp GGTACCCAGTTTAGAGGATGGCCATTTCACTTAGGTGGGTTTATCTaGACACCTTTTTCACTATCTGGAGAAGAAGACACATACTGGTTG +
Preference number: 1 (lower is better)
Translates to: GTQFRGWPFHLGGFI*TPFSLSGEEDTYWL
Trigger: CAACCAGTATGTGTCTTCTTCTCCAGATAGTGAAAAAGGTGTCCAGATAAACCCACCTAAGTGAAATGGCCATCCTCTAAACTGGGTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR TCA 90 bp AGGATTTTGGTAACTGGGTCCTCAGAGTATCGTGAAAATCCAACTTaGGGCTTTCCAAGGCTGTACAGGCATGCTAATATATTCTTTCTT +
Preference number: 1 (lower is better)
Translates to: RILVTGSSEYRENPT*GFPRLYRHANIFFL
Trigger: AAGAAAGAATATATTAGCATGCCTGTACAGCCTTGGAAAGCCTCAAGTTGGATTTTCACGATACTCTGAGGACCCAGTTACCAAAATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590342.1
3UTR GCA 90 bp AAACTCTTATATTCTGGCAAATGTGCATACACATGTGAGGGCTGGTaGATTCCAATATCATCCTTAGAAAGTCTTTTGAAAGGTTTATCG +
Preference number: 1 (lower is better)
Translates to: KLLYSGKCAYTCEGW*IPISSLESLLKGLS
Trigger: CGATAAACCTTTCAAAAGACTTTCTAAGGATGATATTGGAATGCACCAGCCCTCACATGTGTATGCACATTTGCCAGAATATAAGAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR TCA 90 bp CATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGACCTCTCGAGCATGCTCAGGGCAGACTTaGCGTCCATCTTCTGCCGCA +
Preference number: 2 (lower is better)
Translates to: HGSSGHLCPRPPPRTSRACSGQT*RPSSAA
Trigger: TGCGGCAGAAGATGGACGTCAAGTCTGCCCTGAGCA...TGCTCGAGAGGTCCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp ATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGGGCCATCGGGAAGCATGAGCTCGGGACACCTTTaGCCACGGCCTCCCCCACGG +
Preference number: 2 (lower is better)
Translates to: ILGLTLPHTSCRGPSGSMSSGHL*PRPPPR
Trigger: CCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCT...CATGCTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CCA 90 bp GACCTTTCACTTCCCTGCTTGTCTTCTGGCCGCGTTTCTGAGAGGCACGCCCCCGGGTGTGGAAGGCTGTaGGGACAGTGCAGGGCACAG +
Preference number: 2 (lower is better)
Translates to: DLSLPCLSSGRVSERHAPGCGRL*GQCRAQ
Trigger: CTGTGCCCTGCACTGTCCCCACAGCCTTCCACACCC...GGGGGCGTGCCTCTCAGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR TCA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCAGGGGAAGGGAGGTCATaGGGGACCTCTGTGAGCATC +
Preference number: 2 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLAGEGRS*GTSVSI
Trigger: GATGCTCACAGAGGTCCCTCATGACCTCCCTTCCCC...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR TCA 90 bp GTGGGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAGGGGAAGGGAGGTCATaGGGGACCTCTGTGAGCATC +
Preference number: 2 (lower is better)
Translates to: VGTVQGTDVVGRVACICIGEGRS*GTSVSI
Trigger: GATGCTCACAGAGGTCCCTCATGACCTCCCTTCCCC...TATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp ACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCAGCTCGGGACACCTTTaGCCACGGCCTCCCCCACGG +
Preference number: 2 (lower is better)
Translates to: TNIPFPNHPSPWVEGSATSSGHL*PRPPPR
Trigger: CCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCT...GGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp GACCTTTCACTTCCCTGCTTGTCTTCTGGCCGCGTTTCTGAGAGGCACGCCCCCACACACCTCCTGCCGTaGGCCATCGGGAAGCATGCA +
Preference number: 2 (lower is better)
Translates to: DLSLPCLSSGRVSERHAPTHLLP*AIGKHA
Trigger: TGCATGCTTCCCGATGGCCCACGGCAGGAGGTGTGT...GGGGGCGTGCCTCTCAGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CCA 90 bp GTGTTTCCTAAACATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGCCAGGAAGCCATCGTTaGGGCCGATCTCACGGTTCT +
Preference number: 2 (lower is better)
Translates to: VFPKHGSSGHLCPRPPPRPGSHR*GRSHGS
Trigger: AGAACCGTGAGATCGGCCCCAACGATGGCTTCCTGG...CCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATGTTTAGGAAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR TCA 90 bp ACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTCTTCCCAGCCGGGAGTaGGGCCTTACGCCACACCTG +
Preference number: 2 (lower is better)
Translates to: TFPFQTIHHHGWKAAPPALPSRE*GLTPHL
Trigger: CAGGTGTGGCGTAAGGCCTCACTCCCGGCTGGGAAG...AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR TCA 90 bp TTCCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAGCCTGTCCCATGGGGTaGCCACTGCCTGGTCATGGG +
Preference number: 2 (lower is better)
Translates to: FQEQSRKLYFGVLHPTWRACPMG*PLPGHG
Trigger: CCCATGACCAGGCAGTGGTCACCCCATGGGACAGGC...TCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp GTGGGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATACAGAGGTGGTGGGGGTaGCCTAGGGTTTCAACTTCC +
Preference number: 2 (lower is better)
Translates to: VGTVQGTDVVGRVACICIQRWWG*PRVSTS
Trigger: GGAAGTTGAAACCCTAGGGCACCCCCACCACCTCTG...TATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CCA 90 bp GGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAGTTATGTGCTCCCCAGGGTaGGGAAAGTGGCCCAGGACT +
Preference number: 2 (lower is better)
Translates to: GTVQGTDVVGRVACICIVMCSPG*GKWPRT
Trigger: AGTCCTGGGCCACTTTCCCCACCCTGGGGAGCACAT...AACTATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CCA 90 bp GAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGGGCCATCGGGAAGACACACCTCCTGCCGTaGGCCATCGGGAAGCATGCA +
Preference number: 2 (lower is better)
Translates to: EHLRPYTSTHLLPWAIGKTHLLP*AIGKHA
Trigger: TGCATGCTTCCCGATGGCCCACGGCAGGAGGTGTGT...CTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CCA 90 bp CTGTCCAGGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGTGCAGGGCACAGACGTaGTGGGGAGAGTGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: LSRNSSHPQLGMCWLLHKCRAQT*WGEWPA
Trigger: TGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCA...CTTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCCTGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp ACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCTTACGCCACACCTaGCTCTCCGTGTCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: TFPFQTIHHHGWKAAPPAALRHT*LSVSQP
Trigger: TGGCTGGGACACGGAGAGGCAGGTGTGGCGTAAGGC...AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp ACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTCCATGGGGTGACCACTaGCTGGTCATGGGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: TFPFQTIHHHGWKAAPPAPWGDH*LVMGGE
Trigger: CTCCCCTCCCATGACCAGGCAGTGGTCACCCCATGG...AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp GTGTTTCCTAAACATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGGGCCCAGGACTGTGTTaGGACACACTTGTAGACAAG +
Preference number: 2 (lower is better)
Translates to: VFPKHGSSGHLCPRPPPRGPGLC*DTLVDK
Trigger: CTTGTCTACAAGTGTGTCCCAACACAGTCCTGGGCC...CCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATGTTTAGGAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CCA 90 bp TGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGGGCACAGACGTGGTaGGGAGAGTGGCCTGCATTT +
Preference number: 2 (lower is better)
Translates to: CLMSAWLSHFRDPVLAPERAQTW*GEWPAF
Trigger: AAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCT...CTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CCA 90 bp CACTTGCTTCTCCGGGGCTGGATTGAGGGTAAGTGCAGTACACCTGGAGATCCCAAGAGCCACCTGCAATaGGCAGGGTGTGTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: HLLLRGWIEGKCSTPGDPKSHLQ*AGCVPG
Trigger: CCCAGGCACACACCCTGCCCATTGCAGGTGGCTCTT...GGGATCTCCAGGTGTACTGCACTTACCCTCAATCCAGCCCCGGAGAAGCAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp TTCCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAGCTGTGCCTGTCCCATaGGGTGACCACTGCCTGGTC +
Preference number: 2 (lower is better)
Translates to: FQEQSRKLYFGVLHPTWRAVPVP*GDHCLV
Trigger: GACCAGGCAGTGGTCACCCCATGGGACAGGCACAGC...TCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp GGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAGTTTTGAGCTGGCAGAGCTaGGCCAGGAAGCCATCGTTG +
Preference number: 2 (lower is better)
Translates to: GTVQGTDVVGRVACICIVLSWQS*ARKPSL
Trigger: CAACGATGGCTTCCTGGCCCAGCTCTGCCAGCTCAA...AACTATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR TCA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCAGCTCCTGGCCAACTCTaGAAAAGGCACATTCCCTAC +
Preference number: 2 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLAAPGQL*KRHIPY
Trigger: GTAGGGAATGTGCCTTTTTCAGAGTTGGCCAGGAGC...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR TCA 90 bp CCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTGCTCAGGGCAGACTTaGCGTCCATCTTCTGCCGCA +
Preference number: 2 (lower is better)
Translates to: PNHPSPWVEGSATCCPSYCSGQT*RPSSAA
Trigger: TGCGGCAGAAGATGGACGTCAAGTCTGCCCTGAGCA...ATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590935.1
3UTR-3UTR TCA 90 bp CATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGCTGACCCGGCCATTCTTTTaGGCCAAAGCCTGGTCAATG +
Preference number: 2 (lower is better)
Translates to: HVCLAESLQGSRAGTRELTRPFF*AKAWSM
Trigger: CATTGACCAGGCTTTGGCTCAAAAGAATGGCCGGGT...CAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590342.1
3UTR-3UTR GCA 90 bp GTGGGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAGCAAGCTTCTTTATGTaGTCCCCAGGGTGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: VGTVQGTDVVGRVACICIASFFM*SPGWGK
Trigger: CTTTCCCCACCCTGGGGAGCACATAAAGAAGCTTGC...TATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp GACCTTTCACTTCCCTGCTTGTCTTCTGGCCGCGTTTCTGAGAGGCACGCCCCCAGGGTTCTCCAGGTTTaGCCACAAGGCCTCTTTGTG +
Preference number: 2 (lower is better)
Translates to: DLSLPCLSSGRVSERHAPRVLQV*PQGLFV
Trigger: CACAAAGAGGCCTTGTGGGCAAACCTGGAGAACCCT...GGGGGCGTGCCTCTCAGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp CTGTCCAGGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGGCTGTAAGAGCCACCTaGAATGGGCAGGGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: LSRNSSHPQLGMCWLLHKAVRAT*NGQGVC
Trigger: GCACACACCCTGCCCATTGCAGGTGGCTCTTACAGC...CTTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCCTGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp CTGTCCAGGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGCAGAGGTGGTGGGGGTaGCCTAGGGTTTCAACTTCC +
Preference number: 2 (lower is better)
Translates to: LSRNSSHPQLGMCWLLHKQRWWG*PRVSTS
Trigger: GGAAGTTGAAACCCTAGGGCACCCCCACCACCTCTG...CTTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCCTGGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590935.1
3UTR-3UTR CCA 90 bp CCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAACCAGGGTGGGGAAAGTaGCCCAGGACTGTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: PGAEQKALLRGATSHLEKPGWGK*PRTVLG
Trigger: TCCCAACACAGTCCTGGGCCACTTTCCCCACCCTGG...TTTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp TCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGGCTCCCAGGAAGCCATCGTTaGGGCCGATCTCACGGTTCT +
Preference number: 2 (lower is better)
Translates to: SITMGGRQRHLLPIILWLPGSHR*GRSHGS
Trigger: AGAACCGTGAGATCGGCCCCAACGATGGCTTCCTGG...GAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590935.1
3UTR-3UTR CCA 90 bp ATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGGGCCATCGGGAAGCATGTTGAGCTGGCAGAGCTaGGCCAGGAAGCCATCGTTG +
Preference number: 2 (lower is better)
Translates to: ILGLTLPHTSCRGPSGSMLSWQS*ARKPSL
Trigger: CAACGATGGCTTCCTGGCCCAGCTCTGCCAGCTCAA...CATGCTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590342.1
ENST00000590935.1
3UTR CAA 90 bp GGGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTaGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACT +
Preference number: 2 (lower is better)
Translates to: GDSAGHRRGGESGLH*HSSFTRAQGVEVHT
Trigger: AGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR TCA 90 bp TCAGGGAGCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTATGGAGCTGGACAGGGGAAGGGAGGTCATaGGGGACCTCTGTGAGCATC +
Preference number: 2 (lower is better)
Translates to: SGSSKPKILPSSTLWSWTGEGRS*GTSVSI
Trigger: GATGCTCACAGAGGTCCCTCATGACCTCCCTTCCCC...TGTCCAGCTCCATAAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGCTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR TCA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCAATGCCATCCTTGGGCTaGGCCATGAAGCTTAGGATT +
Preference number: 2 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLAMPSLG*AMKLRI
Trigger: AATCCTAAGCTTCATGGCTCAGCCCAAGGATGGCAT...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590342.1
3UTR-3UTR GCA 90 bp GAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGGGCCATCGGGAAGGCATTGGTGTTGACGTaGATGAAGGACCTGCCCTCA +
Preference number: 2 (lower is better)
Translates to: EHLRPYTSTHLLPWAIGKALVLT*MKDLPS
Trigger: TGAGGGCAGGTCCTTCATGCACGTCAACACCAATGC...CTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590342.1
3UTR-3UTR CCA 90 bp GCAGTACACCTGGAGATCCCAGGGAGCCCCCTTCTTGAGAAAGAGTATCGTATGACACACCTCCTGCCGTaGGCCATCGGGAAGCATGCA +
Preference number: 2 (lower is better)
Translates to: AVHLEIPGSPLLEKEYRMTHLLP*AIGKHA
Trigger: TGCATGCTTCCCGATGGCCCACGGCAGGAGGTGTGT...CATACGATACTCTTTCTCAAGAAGGGGGCTCCCTGGGATCTCCAGGTGTACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp AGCTCCCTAGCCTTTTCCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACCCTATGCACAGGGTGTaGAAGGCTGTGGGGACAGTG +
Preference number: 2 (lower is better)
Translates to: SSLAFSRSRAESSTSGCYPMHRV*KAVGTV
Trigger: CACTGTCCCCACAGCCTTCCACACCCTGTGCATAGG...GTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGGAAAAGGCTAGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp GCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTATGGAGCTGGACAACCCTGGCCTATGCACAGGGTGTaGAAGGCTGTGGGGACAGTG +
Preference number: 2 (lower is better)
Translates to: AANPKSCPAPPYGAGQPWPMHRV*KAVGTV
Trigger: CACTGTCCCCACAGCCTTCCACACCCTGTGCATAGG...CCAGGGTTGTCCAGCTCCATAAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp GCTGTCCAGGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAATCAGGGATCCCGTGCTaGCACCAGAGAGCTGTAAGA +
Preference number: 2 (lower is better)
Translates to: AVQEQLPSAAGHVLALTQSGIPC*HQRAVR
Trigger: TCTTACAGCTCTCTGGTGCCAGCACGGGATCCCTGA...TTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCCTGGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp ACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTATCCATCACCATGGGTaGAAGGCAGCGCCACCTGCT +
Preference number: 2 (lower is better)
Translates to: TFPFQTIHHHGWKAAPPAIHHHG*KAAPPA
Trigger: AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGAT...AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
3UTR-3UTR TCA 90 bp CATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGCTGCGTGAAAATCCAACTTaGGGCTTTCCAAGGCTGTAC +
Preference number: 2 (lower is better)
Translates to: HVCLAESLQGSRAGTRELRENPT*GFPRLY
Trigger: GTACAGCCTTGGAAAGCCTCAAGTTGGATTTTCACG...CAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590342.1
3UTR-3UTR GCA 90 bp CACTTGCTTCTCCGGGGCTGGATTGAGGGTAAGTGCAGTACACCTGGAGATCCCGACCTTTCACTTCCCTaGTTGTCTTCTGGCCGCGTT +
Preference number: 2 (lower is better)
Translates to: HLLLRGWIEGKCSTPGDPDLSLP*LSSGRV
Trigger: AACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC...GGGATCTCCAGGTGTACTGCACTTACCCTCAATCCAGCCCCGGAGAAGCAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp AAAGAATCCAGCTTCAGGGAGCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTGGGTGTGGAAGGCTGTaGGGACAGTGCAGGGCACAG +
Preference number: 2 (lower is better)
Translates to: KESSFREQQTQNLAQLHLGCGRL*GQCRAQ
Trigger: CTGTGCCCTGCACTGTCCCCACAGCCTTCCACACCC...AAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGCTCCCTGAAGCTGGATTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp ACCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCAAGAGCCACCTGCAATaGGCAGGGTGTGTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: TTNKGSIWTLRHVSCLPGKSHLQ*AGCVPG
Trigger: CCCAGGCACACACCCTGCCCATTGCAGGTGGCTCTT...GCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CCA 90 bp GCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACTGGATAACTCAGAGTaGCAGGGACACAGACGAGCC +
Preference number: 2 (lower is better)
Translates to: APTFPFQTIHHHGWKAAPLDNSE*QGHRRA
Trigger: GGCTCGTCTGTGTCCCTGCCACTCTGAGTTATCCAG...TGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
3UTR-3UTR TCA 90 bp GGGGAGAGTGGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGTCGGACCTCAAGACGTaGGAGGGCTGCCTATGCACA +
Preference number: 2 (lower is better)
Translates to: GESGLHLHSSFTRAQGVESDLKT*EGCLCT
Trigger: TGTGCATAGGCAGCCCTCTCACGTCTTGAGGTCCGA...CTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR TCA 90 bp CACCTGGAGAAAGAGCTGCACATTCTAGCCTATGAGGGACCCACCCTTTTCACTTCATGTCTGCCTGGCTaGGTCACTTCAGGGATCCCG +
Preference number: 2 (lower is better)
Translates to: HLEKELHILAYEGPTLFTSCLPG*VTSGIP
Trigger: CGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGA...AGTGAAAAGGGTGGGTCCCTCATAGGCTAGAATGTGCAGCTCTTTCTCCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp AGGAGCTCCTGGCCAACTCTGAAAAAGGCACATTCCCTACCTTGGCATATTAACCTTCCACACACCTCCTaGCGTGGGCCATCGGGAAGC +
Preference number: 2 (lower is better)
Translates to: RSSWPTLKKAHSLPWHINLPHTS*RGPSGS
Trigger: GCTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAG...GTTAATATGCCAAGGTAGGGAATGTGCCTTTTTCAGAGTTGGCCAGGAGCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp GACCTTTCACTTCCCTGCTTGTCTTCTGGCCGCGTTTCTGAGAGGCACGCCCCCAGAGTGGCCTGCATTTaGATAGTTCCTTTACTAGGG +
Preference number: 2 (lower is better)
Translates to: DLSLPCLSSGRVSERHAPRVACI*IVPLLG
Trigger: CCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCT...GGGGGCGTGCCTCTCAGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp TGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGGTGGGGAGAGTGGCCTaGATTTGCATAGTTCCTTTA +
Preference number: 2 (lower is better)
Translates to: CLMSAWLSHFRDPVLAPEVGRVA*ICIVPL
Trigger: TAAAGGAACTATGCAAATGCAGGCCACTCTCCCCAC...CTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp CCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAAAGGGTTCTCCAGGTTTaGCCACAAGGCCTCTTTGTG +
Preference number: 2 (lower is better)
Translates to: PGAEQKALLRGATSHLEKRVLQV*PQGLFV
Trigger: CACAAAGAGGCCTTGTGGGCAAACCTGGAGAACCCT...TTTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp ACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCCCCCACACACATCCATaGACACACGCTGTAATTGGC +
Preference number: 2 (lower is better)
Translates to: TNIPFPNHPSPWVEGSATPHTHP*THAVIG
Trigger: GCCAATTACAGCGTGTGTGCATGGATGTGTGTGGGG...GGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp TTCCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAGCTCTACTTCGGGGTaGTACATCCCACCTGGAGAA +
Preference number: 2 (lower is better)
Translates to: FQEQSRKLYFGVLHPTWRSSTSG*YIPPGE
Trigger: TTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCT...TCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp ACCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCCCGATCTCACGGTTCTaGCTCACGATGCTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: TTNKGSIWTLRHVSCLPGPISRF*LTMLRA
Trigger: TGCCCTGAGCATCGTGAGGCAGAACCGTGAGATCGG...GCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp CACCTGGAGAAAGAGCTGCACATTCTAGCCTATGAGGGACCCACCCTTTTCACTCCGATCTCACGGTTCTaGCTCACGATGCTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: HLEKELHILAYEGPTLFTPISRF*LTMLRA
Trigger: TGCCCTGAGCATCGTGAGGCAGAACCGTGAGATCGG...AGTGAAAAGGGTGGGTCCCTCATAGGCTAGAATGTGCAGCTCTTTCTCCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590935.1
3UTR-3UTR CCA 90 bp ATGAGGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGGGCCCAGGACTGTGTTaGGACACACTTGTAGACAAG +
Preference number: 2 (lower is better)
Translates to: MRDLCEHLRPYTSTHLLPGPGLC*DTLVDK
Trigger: CTTGTCTACAAGTGTGTCCCAACACAGTCCTGGGCC...CGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CCA 90 bp ACCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCCCTATGCACAGGGTGTaGAAGGCTGTGGGGACAGTG +
Preference number: 2 (lower is better)
Translates to: TTNKGSIWTLRHVSCLPGPMHRV*KAVGTV
Trigger: CACTGTCCCCACAGCCTTCCACACCCTGTGCATAGG...GCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CCA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCAAATGCAGCCTTGCTGTaGGAATCTCCATCCACTAAT +
Preference number: 2 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLANAALL*ESPSTN
Trigger: ATTAGTGGATGGAGATTCCCACAGCAAGGCTGCATT...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CCA 90 bp TCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGGCTCATGAATTCAGTCTTCTaGGAGCGTGACACACCCACC +
Preference number: 2 (lower is better)
Translates to: SITMGGRQRHLLPIILWLMNSVF*ERDTPT
Trigger: GGTGGGTGTGTCACGCTCCCAGAAGACTGAATTCAT...GAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp CTGTCCAGGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGGTGCTACATCCCACCTaGAGAAAGAGCTGCACATTC +
Preference number: 2 (lower is better)
Translates to: LSRNSSHPQLGMCWLLHKVLHPT*RKSCTF
Trigger: GAATGTGCAGCTCTTTCTCCAGGTGGGATGTAGCAC...CTTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCCTGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp TCAGGGAGCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTATGGAGCTGGACAAGTCTGTCATTGAGCTaGCAGAGCTGGGCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: SGSSKPKILPSSTLWSWTSLSLS*QSWARK
Trigger: CTTCCTGGCCCAGCTCTGCCAGCTCAATGACAGACT...TGTCCAGCTCCATAAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGCTCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590935.1
3UTR-3UTR TCA 90 bp GCAGTACACCTGGAGATCCCAGGGAGCCCCCTTCTTGAGAAAGAGTATCGTATGAGTCTTCTGGGAGCGTaGCACACCCACCAGAACAAT +
Preference number: 2 (lower is better)
Translates to: AVHLEIPGSPLLEKEYRMSLLGA*HTHQNN
Trigger: ATTGTTCTGGTGGGTGTGTCACGCTCCCAGAAGACT...CATACGATACTCTTTCTCAAGAAGGGGGCTCCCTGGGATCTCCAGGTGTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR TCA 90 bp ACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTACGGGGTTTCAGGGGTaGAGGACTATCAAGAAATCC +
Preference number: 2 (lower is better)
Translates to: TFPFQTIHHHGWKAAPPATGFQG*RTIKKS
Trigger: GGATTTCTTGATAGTCCTTCACCCCTGAAACCCCGT...AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp GGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAGTTAGAGTGGCCTGCATTTaGATAGTTCCTTTACTAGGG +
Preference number: 2 (lower is better)
Translates to: GTVQGTDVVGRVACICIVRVACI*IVPLLG
Trigger: CCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCT...AACTATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp CCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCTACTTCAGGGATCCCGTaGTGGCACCAGAGAGCTGTA +
Preference number: 2 (lower is better)
Translates to: PPIKDPFGHSAMSHVCLATSGIP*WHQRAV
Trigger: TACAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGT...AGCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp GCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCATGGATTGAGGGTAAGTaGAGTACACCTGGAGATCCC +
Preference number: 2 (lower is better)
Translates to: APTFPFQTIHHHGWKAAPWIEGK*STPGDP
Trigger: GGGATCTCCAGGTGTACTGCACTTACCCTCAATCCA...TGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCAAATAAAGGATCCATTTaGACACTCCGCCATGTCTCA +
Preference number: 2 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLANKGSI*TLRHVS
Trigger: TGAGACATGGCGGAGTGTCCAAATGGATCCTTTATT...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CCA 90 bp CTGTCCAGGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGGAAGAAGACACATACTaGTTGTTCAGGGCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: LSRNSSHPQLGMCWLLHKEEDTY*LFRAAV
Trigger: CACAGCAGCCCTGAACAACCAGTATGTGTCTTCTTC...CTTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCCTGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp CCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCTAGTCTGTCATTGAGCTaGCAGAGCTGGGCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: PPIKDPFGHSAMSHVCLASLSLS*QSWARK
Trigger: CTTCCTGGCCCAGCTCTGCCAGCTCAATGACAGACT...AGCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590342.1
ENST00000590935.1
3UTR CAA 90 bp AGAGTGGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTaGAGGTCCACACTCAAGAGAGGATTCGGGAGTTGGGGAAGGGAG +
Preference number: 2 (lower is better)
Translates to: RVACICIVPLLGLKV*RSTLKRGFGSWGRE
Trigger: CTCCCTTCCCCAACTCCCGAATCCTCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR TCA 90 bp GGTAAGACTCCTTCACAAGGCCTTGCGAGTGATCCTACCATGAATTCAGTCTTCTCGGACCTCAAGACGTaGGAGGGCTGCCTATGCACA +
Preference number: 2 (lower is better)
Translates to: GKTPSQGLASDPTMNSVFSDLKT*EGCLCT
Trigger: TGTGCATAGGCAGCCCTCTCACGTCTTGAGGTCCGA...GAAGACTGAATTCATGGTAGGATCACTCGCAAGGCCTTGTGAAGGAGTCTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR TCA 90 bp TCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGGCTCATTTCCTTGCGGTGCTaGATTCCAAGTGGGGATTAT +
Preference number: 2 (lower is better)
Translates to: SITMGGRQRHLLPIILWLISLRC*IPSGDY
Trigger: ATAATCCCCACTTGGAATTCAGCACCGCAAGGAAAT...GAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp ATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGGGCCATCGGGAAGCATGAGAGTGGCCTGCATTTaGATAGTTCCTTTACTAGGG +
Preference number: 2 (lower is better)
Translates to: ILGLTLPHTSCRGPSGSMRVACI*IVPLLG
Trigger: CCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCT...CATGCTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp ATGAGGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGGTGGGGAGAGTGGCCTaGATTTGCATAGTTCCTTTA +
Preference number: 2 (lower is better)
Translates to: MRDLCEHLRPYTSTHLLPVGRVA*ICIVPL
Trigger: TAAAGGAACTATGCAAATGCAGGCCACTCTCCCCAC...CGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp TTCACTTGCTTCTCCGGGGCTGGATTGAGGGTAAGTGCAGTACACCTGGAGATCCGAGTGGCTTGGGCTTaGCAACACTACAATTCAGGA +
Preference number: 2 (lower is better)
Translates to: FTCFSGAGLRVSAVHLEIRVAWA*QHYNSG
Trigger: TCCTGAATTGTAGTGTTGGCAAGCCCAAGCCACTCG...GATCTCCAGGTGTACTGCACTTACCCTCAATCCAGCCCCGGAGAAGCAAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp CCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCTCCCCACACACATCCATaGACACACGCTGTAATTGGC +
Preference number: 2 (lower is better)
Translates to: PPIKDPFGHSAMSHVCLAPHTHP*THAVIG
Trigger: GCCAATTACAGCGTGTGTGCATGGATGTGTGTGGGG...AGCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CCA 90 bp CACCTGGAGAAAGAGCTGCACATTCTAGCCTATGAGGGACCCACCCTTTTCACTGGCCCAGGACTGTGTTaGGACACACTTGTAGACAAG +
Preference number: 2 (lower is better)
Translates to: HLEKELHILAYEGPTLFTGPGLC*DTLVDK
Trigger: CTTGTCTACAAGTGTGTCCCAACACAGTCCTGGGCC...AGTGAAAAGGGTGGGTCCCTCATAGGCTAGAATGTGCAGCTCTTTCTCCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp ATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTCAAGAGAGGATTCCCAGGGTGGGGAAAGTaGCCCAGGACTGTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: IVPLLGLKVLRSTLKRGFPGWGK*PRTVLG
Trigger: TCCCAACACAGTCCTGGGCCACTTTCCCCACCCTGG...GAATCCTCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CCA 90 bp CATAATTTCCTTGCGGTGCTGAATTCCAAGTGGGGATTATTAGAGACCCCTCAGATGTGCTCCCCAGGGTaGGGAAAGTGGCCCAGGACT +
Preference number: 2 (lower is better)
Translates to: HNFLAVLNSKWGLLETPQMCSPG*GKWPRT
Trigger: AGTCCTGGGCCACTTTCCCCACCCTGGGGAGCACAT...CTGAGGGGTCTCTAATAATCCCCACTTGGAATTCAGCACCGCAAGGAAATTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp AGCATCTTAACTTGTGGCACAAAAGGCACCAACATTCCCTTTCCAAACCATCCAGGGTGTGGAAGGCTGTaGGGACAGTGCAGGGCACAG +
Preference number: 2 (lower is better)
Translates to: SILTCGTKGTNIPFPNHPGCGRL*GQCRAQ
Trigger: CTGTGCCCTGCACTGTCCCCACAGCCTTCCACACCC...TGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTGTGCCACAAGTTAAGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp AGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAAGAGCTGCATGTCTCATGTCTGCCTaGCTGAGTCACTTCAGGGAT +
Preference number: 2 (lower is better)
Translates to: RAESSTSGCYIPPGERAACLMSA*LSHFRD
Trigger: ATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACA...TGCAGCTCTTTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp ACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTCAGCTGGGCATGTGTTaGCTCTTACACAAGAGACTT +
Preference number: 2 (lower is better)
Translates to: TFPFQTIHHHGWKAAPPAQLGMC*LLHKRL
Trigger: AAGTCTCTTGTGTAAGAGCCAACACATGCCCAGCTG...AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR TCA 90 bp GCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCAATTTCCTTGCGGTGCTaGATTCCAAGTGGGGATTAT +
Preference number: 2 (lower is better)
Translates to: APTFPFQTIHHHGWKAAPISLRC*IPSGDY
Trigger: ATAATCCCCACTTGGAATTCAGCACCGCAAGGAAAT...TGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp GGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTGCAAGCTTCTTTATGTaGTCCCCAGGGTGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: GLHLHSSFTRAQGVEVHTASFFM*SPGWGK
Trigger: CTTTCCCCACCCTGGGGAGCACATAAAGAAGCTTGC...AGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp AAAGAATCCAGCTTCAGGGAGCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTGCCATGTCTCATGTCTaGCTGGCTGAGTCACTTCAG +
Preference number: 2 (lower is better)
Translates to: KESSFREQQTQNLAQLHLAMSHV*LAESLQ
Trigger: CTGAAGTGACTCAGCCAGGCAGACATGAGACATGGC...AAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGCTCCCTGAAGCTGGATTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp TTTTTCACTATCTGGAGAAGAAGACACATACTGGTTGTTCAGGGCTGCTGTGGTATGTGCTCCCCAGGGTaGGGAAAGTGGCCCAGGACT +
Preference number: 2 (lower is better)
Translates to: FFTIWRRRHILVVQGCCGMCSPG*GKWPRT
Trigger: AGTCCTGGGCCACTTTCCCCACCCTGGGGAGCACAT...ACCACAGCAGCCCTGAACAACCAGTATGTGTCTTCTTCTCCAGATAGTGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp TTCCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGATACACATGTGAGGGCTaGTGCATTCCAATATCATCC +
Preference number: 2 (lower is better)
Translates to: FQEQSRKLYFGVLHPTWRYTCEG*CIPISS
Trigger: GGATGATATTGGAATGCACCAGCCCTCACATGTGTA...TCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp AGCATCTTAACTTGTGGCACAAAAGGCACCAACATTCCCTTTCCAAACCATCCATCCACCTTATGGAGCTaGACAACCCTGGGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: SILTCGTKGTNIPFPNHPSTLWS*TTLGAR
Trigger: CCTGGCCCCCAGGGTTGTCCAGCTCCATAAGGTGGA...TGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTGTGCCACAAGTTAAGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR TCA 90 bp ATTTCTTTCGTTTTAGGTAAGACTCCTTCACAAGGCCTTGCGAGTGATCCTACCCCATCCACTAATAACTaGCGGACACCCCCACCCCAG +
Preference number: 2 (lower is better)
Translates to: ISFVLGKTPSQGLASDPTPSTNN*RTPPPQ
Trigger: CTGGGGTGGGGGTGTCCGTCAGTTATTAGTGGATGG...GGTAGGATCACTCGCAAGGCCTTGTGAAGGAGTCTTACCTAAAACGAAAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR TCA 90 bp GGGGAGAGTGGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGCAGAGCAGCAGATTCTaGACTCAAGGCTTCCAAAGA +
Preference number: 2 (lower is better)
Translates to: GESGLHLHSSFTRAQGVEQSSRF*TQGFQR
Trigger: TCTTTGGAAGCCTTGAGTTCAGAATCTGCTGCTCTG...CTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp TTCACTATCTGGAGAAGAAGACACATACTGGTTGTTCAGGGCTGCTGTGGTCACAGGGTTCTCCAGGTTTaGCCACAAGGCCTCTTTGTG +
Preference number: 2 (lower is better)
Translates to: FTIWRRRHILVVQGCCGHRVLQV*PQGLFV
Trigger: CACAAAGAGGCCTTGTGGGCAAACCTGGAGAACCCT...GTGACCACAGCAGCCCTGAACAACCAGTATGTGTCTTCTTCTCCAGATAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp CATAATTTCCTTGCGGTGCTGAATTCCAAGTGGGGATTATTAGAGACCCCTCAGACTTCAGGGATCCCGTaGTGGCACCAGAGAGCTGTA +
Preference number: 2 (lower is better)
Translates to: HNFLAVLNSKWGLLETPQTSGIP*WHQRAV
Trigger: TACAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGT...CTGAGGGGTCTCTAATAATCCCCACTTGGAATTCAGCACCGCAAGGAAATTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp ACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTACATGTGAGGGCTGGTaGATTCCAATATCATCCTTA +
Preference number: 2 (lower is better)
Translates to: TFPFQTIHHHGWKAAPPATCEGW*IPISSL
Trigger: TAAGGATGATATTGGAATGCACCAGCCCTCACATGT...AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp GCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTATGGAGCTGGACAACCCTGGCACCCACCAGAACAATaGCCTATATATATTTGGTGC +
Preference number: 2 (lower is better)
Translates to: AANPKSCPAPPYGAGQPWHPPEQ*PIYIWC
Trigger: GCACCAAATATATATAGGGCATTGTTCTGGTGGGTG...CCAGGGTTGTCCAGCTCCATAAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp CACCTGGAGAAAGAGCTGCACATTCTAGCCTATGAGGGACCCACCCTTTTCACTATTCAAATGCAGCCTTaGTGTGGGAATCTCCATCCA +
Preference number: 2 (lower is better)
Translates to: HLEKELHILAYEGPTLFTIQMQP*CGNLHP
Trigger: TGGATGGAGATTCCCACAGCAAGGCTGCATTTGAAT...AGTGAAAAGGGTGGGTCCCTCATAGGCTAGAATGTGCAGCTCTTTCTCCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp GGTAAGACTCCTTCACAAGGCCTTGCGAGTGATCCTACCATGAATTCAGTCTTCATGAATTCAGTCTTCTaGGAGCGTGACACACCCACC +
Preference number: 2 (lower is better)
Translates to: GKTPSQGLASDPTMNSVFMNSVF*ERDTPT
Trigger: GGTGGGTGTGTCACGCTCCCAGAAGACTGAATTCAT...GAAGACTGAATTCATGGTAGGATCACTCGCAAGGCCTTGTGAAGGAGTCTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp TCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGGCTCACCTTTTTCACTATCTaGAGAAGAAGACACATACTG +
Preference number: 2 (lower is better)
Translates to: SITMGGRQRHLLPIILWLTFFTI*RRRHIL
Trigger: CAGTATGTGTCTTCTTCTCCAGATAGTGAAAAAGGT...GAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR CAA 90 bp GGCAGGGACACAGACGAGCCTGTGGAAAGGTATACTGCTTTAAGATaGAGAAGAAAACCATTTGGCGCTCTAATTTTGCCTGGATGGTGC +
Preference number: 2 (lower is better)
Translates to: GRDTDEPVERYTALR*RRKPFGALILPGWC
Trigger: GCACCATCCAGGCAAAATTAGAGCGCCAAATGGTTTTCTTCTCAATCTTAAAGCAGTATACCTTTCCACAGGCTCGTCTGTGTCCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp AGCATCTTAACTTGTGGCACAAAAGGCACCAACATTCCCTTTCCAAACCATCCAGCAAGCTTCTTTATGTaGTCCCCAGGGTGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: SILTCGTKGTNIPFPNHPASFFM*SPGWGK
Trigger: CTTTCCCCACCCTGGGGAGCACATAAAGAAGCTTGC...TGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTGTGCCACAAGTTAAGATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp AGGAGCTCCTGGCCAACTCTGAAAAAGGCACATTCCCTACCTTGGCATATTAACGTGGGGAGAGTGGCCTaGATTTGCATAGTTCCTTTA +
Preference number: 2 (lower is better)
Translates to: RSSWPTLKKAHSLPWHINVGRVA*ICIVPL
Trigger: TAAAGGAACTATGCAAATGCAGGCCACTCTCCCCAC...GTTAATATGCCAAGGTAGGGAATGTGCCTTTTTCAGAGTTGGCCAGGAGCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp CCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCTAGGAAATCATTCAAATaGAGCCTTGCTGTGGGAATC +
Preference number: 2 (lower is better)
Translates to: PPIKDPFGHSAMSHVCLARKSFK*SLAVGI
Trigger: GATTCCCACAGCAAGGCTGCATTTGAATGATTTCCT...AGCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp AGATTGAGAAGAAAACCATTTGGCGCTCTAATTTTGCCTGGATGGTGCTCTGTCGCCATGTCTCATGTCTaGCTGGCTGAGTCACTTCAG +
Preference number: 2 (lower is better)
Translates to: RLRRKPFGALILPGWCSVAMSHV*LAESLQ
Trigger: CTGAAGTGACTCAGCCAGGCAGACATGAGACATGGC...GACAGAGCACCATCCAGGCAAAATTAGAGCGCCAAATGGTTTTCTTCTCAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR TCA 90 bp ATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTCAAGAGAGGATTCCAGAGCAGCAGATTCTaGACTCAAGGCTTCCAAAGA +
Preference number: 2 (lower is better)
Translates to: IVPLLGLKVLRSTLKRGFQSSRF*TQGFQR
Trigger: TCTTTGGAAGCCTTGAGTTCAGAATCTGCTGCTCTG...GAATCCTCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR TCA 90 bp AGCATCTTAACTTGTGGCACAAAAGGCACCAACATTCCCTTTCCAAACCATCCAACGGGGTTTCAGGGGTaGAGGACTATCAAGAAATCC +
Preference number: 2 (lower is better)
Translates to: SILTCGTKGTNIPFPNHPTGFQG*RTIKKS
Trigger: GGATTTCTTGATAGTCCTTCACCCCTGAAACCCCGT...TGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTGTGCCACAAGTTAAGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR TCA 90 bp AGCATCTTAACTTGTGGCACAAAAGGCACCAACATTCCCTTTCCAAACCATCCACCCTTCAGTGATTCCTaGCACCAGTTCTGTGAAAAA +
Preference number: 2 (lower is better)
Translates to: SILTCGTKGTNIPFPNHPPFSDS*HQFCEK
Trigger: TTTTTCACAGAACTGGTGTCAGGAATCACTGAAGGG...TGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTGTGCCACAAGTTAAGATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
3UTR-3UTR GCA 90 bp ATTTCTTTCGTTTTAGGTAAGACTCCTTCACAAGGCCTTGCGAGTGATCCTACCATTCAAATGCAGCCTTaGTGTGGGAATCTCCATCCA +
Preference number: 2 (lower is better)
Translates to: ISFVLGKTPSQGLASDPTIQMQP*CGNLHP
Trigger: TGGATGGAGATTCCCACAGCAAGGCTGCATTTGAAT...GGTAGGATCACTCGCAAGGCCTTGTGAAGGAGTCTTACCTAAAACGAAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR GCA 90 bp ATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTCAAGAGAGGATTCAGGAAATCATTCAAATaGAGCCTTGCTGTGGGAATC +
Preference number: 2 (lower is better)
Translates to: IVPLLGLKVLRSTLKRGFRKSFK*SLAVGI
Trigger: GATTCCCACAGCAAGGCTGCATTTGAATGATTTCCT...GAATCCTCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR GCA 90 bp CCCAGAGTGACCCTGAAGATAAATAGCATCACAATCACTTTCCATAATAACAATTATCAGACACCTATGTaGAAGGTGCTGGGGGCATGG +
Preference number: 2 (lower is better)
Translates to: PRVTLKINSITITFHNNNYQTPM*KVLGAW
Trigger: CCATGCCCCCAGCACCTTGCACATAGGTGTCTGATA...ATTGTTATTATGGAAAGTGATTGTGATGCTATTTATCTTCAGGGTCACTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CCA 90 bp TTTTTCACTATCTGGAGAAGAAGACACATACTGGTTGTTCAGGGCTGCTGTGGTAATAAAGGATCCATTTaGACACTCCGCCATGTCTCA +
Preference number: 2 (lower is better)
Translates to: FFTIWRRRHILVVQGCCGNKGSI*TLRHVS
Trigger: TGAGACATGGCGGAGTGTCCAAATGGATCCTTTATT...ACCACAGCAGCCCTGAACAACCAGTATGTGTCTTCTTCTCCAGATAGTGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR TCA 72 bp ACGGACACCCCCACCCCAGCTTCGGACCTCAAGACGTaGGAGGGCTGCCTATGCACAGGGTGTGGAAGGCTG +
Preference number: 3 (lower is better)
Translates to: TDTPTPASDLKT*EGCLCTGCGRL
Trigger: CAGCCTTCCACACCCTGTGCATAGGCAGCCCTCTCACGTCTTGAGGTCCGAAGCTGGGGTGGGGGTGTCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CAA 90 bp GCCGGGAGTGAGGCCTTACGCCACACCTGCCTCTCCGTGTCCCAGCCAGGAGCTCTGAGGACCTTCTCTTaGCCCAGAGTGACCCTGAAG +
Preference number: 3 (lower is better)
Translates to: AGSEALRHTCLSVSQPGALRTFS*PRVTLK
Trigger: CTTCAGGGTCACTCTGGGCAAAGAGAAGGTCCTCAG...AGCTCCTGGCTGGGACACGGAGAGGCAGGTGTGGCGTAAGGCCTCACTCCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CAA 90 bp CATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGACCTCTCGAGCATGGCCCAGGACTGTGTaGGGACACACTTGTAGACAA +
Preference number: 3 (lower is better)
Translates to: HGSSGHLCPRPPPRTSRAWPRTV*GHTCRQ
Trigger: TTGTCTACAAGTGTGTCCCAACACAGTCCTGGGCCA...TGCTCGAGAGGTCCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR CCA 72 bp CCTCAAGACGTGAGAGGGCTGCCTATGCACAGGGTGTaGAAGGCTGTGGGGACAGTGCAGGGCACAGACGTG +
Preference number: 3 (lower is better)
Translates to: PQDVRGLPMHRV*KAVGTVQGTDV
Trigger: CACGTCTGTGCCCTGCACTGTCCCCACAGCCTTCCACACCCTGTGCATAGGCAGCCCTCTCACGTCTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CAA 90 bp GGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGAGACTTTCAGCTCGGGACACCTTaGCCCACGGCCTCCCCCACG +
Preference number: 3 (lower is better)
Translates to: GTAPIRSWACVGSYTRDFQLGTP*PTASPT
Trigger: CGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTG...AAAGTCTCTTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CAA 90 bp GCCGGGAGTGAGGCCTTACGCCACACCTGCCTCTCCGTGTCCCAGCCAGGAGCTCATTCAAATGCAGCCTaGCTGTGGGAATCTCCATCC +
Preference number: 3 (lower is better)
Translates to: AGSEALRHTCLSVSQPGAHSNAA*LWESPS
Trigger: GGATGGAGATTCCCACAGCAAGGCTGCATTTGAATG...AGCTCCTGGCTGGGACACGGAGAGGCAGGTGTGGCGTAAGGCCTCACTCCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR TCA 72 bp TGCTTCTGTGTGATCAGAGACCTTCCCAGCCGGGAGTaGGGCCTTACGCCACACCTGCCTCTCCGTGTCCCA +
Preference number: 3 (lower is better)
Translates to: CFCVIRDLPSRE*GLTPHLPLRVP
Trigger: TGGGACACGGAGAGGCAGGTGTGGCGTAAGGCCTCACTCCCGGCTGGGAAGGTCTCTGATCACACAGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR GCA 72 bp AGTGTGTTTCCTAAACATGGCAGCTCGGGACACCTTTaGCCACGGCCTCCCCCACGGACCTCTCGAGCAGAG +
Preference number: 3 (lower is better)
Translates to: SVFPKHGSSGHL*PRPPPRTSRAE
Trigger: CTCTGCTCGAGAGGTCCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATGTTTAGGAAACACACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR GCA 72 bp GTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTaGCGTGGGCCATCGGGAAGCATGCAGGCCACAGGC +
Preference number: 3 (lower is better)
Translates to: VSILGLTLPHTS*RGPSGSMQATG
Trigger: GCCTGTGGCCTGCATGCTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR GCA 72 bp GCCAGGAAGCCATCGTTGGGGCCGATCTCACGGTTCTaGCTCACGATGCTCAGGGCAGACTTGACGTCCATC +
Preference number: 3 (lower is better)
Translates to: ARKPSLGPISRF*LTMLRADLTSI
Trigger: GATGGACGTCAAGTCTGCCCTGAGCATCGTGAGGCAGAACCGTGAGATCGGCCCCAACGATGGCTTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590342.1
ENST00000590935.1
3UTR CCA 72 bp CATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTaGGCCATCGGGAAGCATGCAGGCCACAGGCCTTCC +
Preference number: 3 (lower is better)
Translates to: HLRPYTSTHLLP*AIGKHAGHRPS
Trigger: GGAAGGCCTGTGGCCTGCATGCTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CAA 90 bp CCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCTCAGCTCGGGACACCTTaGCCCACGGCCTCCCCCACG +
Preference number: 3 (lower is better)
Translates to: PPIKDPFGHSAMSHVCLAQLGTP*PTASPT
Trigger: CGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTG...AGCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CAA 90 bp GTGGGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAGAGAGGATTCGGGAGTaGGGGAAGGGAGGTCATGAG +
Preference number: 3 (lower is better)
Translates to: VGTVQGTDVVGRVACICIERIRE*GKGGHE
Trigger: CTCATGACCTCCCTTCCCCAACTCCCGAATCCTCTC...TATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CAA 90 bp GACCTTTCACTTCCCTGCTTGTCTTCTGGCCGCGTTTCTGAGAGGCACGCCCCCATGCTCAGGGCAGACTaGACGTCCATCTTCTGCCGC +
Preference number: 3 (lower is better)
Translates to: DLSLPCLSSGRVSERHAPMLRAD*TSIFCR
Trigger: GCGGCAGAAGATGGACGTCAAGTCTGCCCTGAGCAT...GGGGGCGTGCCTCTCAGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590342.1
ENST00000590935.1
3UTR GCA 72 bp GAAAAGCGGACAGCAAATGACCAGGCTGGGCAGGGCTaGTTCTGTGTGATCAGAGACCTTCCCAGCCGGGAG +
Preference number: 3 (lower is better)
Translates to: EKRTANDQAGQG*FCVIRDLPSRE
Trigger: CTCCCGGCTGGGAAGGTCTCTGATCACACAGAAGCAGCCCTGCCCAGCCTGGTCATTTGCTGTCCGCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CAA 90 bp ACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGGCCAGGAAGCCATCGTaGGGGCCGATCTCACGGTTC +
Preference number: 3 (lower is better)
Translates to: TIHHHGWKAAPPAAHHIMARKPS*GPISRF
Trigger: GAACCGTGAGATCGGCCCCAACGATGGCTTCCTGGC...CATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590935.1
3UTR-3UTR CAA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCATGGCCCAGGACTGTGTaGGGACACACTTGTAGACAA +
Preference number: 3 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLAWPRTV*GHTCRQ
Trigger: TTGTCTACAAGTGTGTCCCAACACAGTCCTGGGCCA...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CAA 90 bp CTGTCCAGGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGGAGAGGATTCGGGAGTaGGGGAAGGGAGGTCATGAG +
Preference number: 3 (lower is better)
Translates to: LSRNSSHPQLGMCWLLHKERIRE*GKGGHE
Trigger: CTCATGACCTCCCTTCCCCAACTCCCGAATCCTCTC...CTTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCCTGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CAA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACTAGGGCTCAAGGTGTaGAGGTCCACACTCAAGAGA +
Preference number: 3 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLALGLKV*RSTLKR
Trigger: TCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAG...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CAA 90 bp GACCTTTCACTTCCCTGCTTGTCTTCTGGCCGCGTTTCTGAGAGGCACGCCCCCACGAGTGGCTTGGGCTaGCCAACACTACAATTCAGG +
Preference number: 3 (lower is better)
Translates to: DLSLPCLSSGRVSERHAPTSGLG*PTLQFR
Trigger: CCTGAATTGTAGTGTTGGCAAGCCCAAGCCACTCGT...GGGGGCGTGCCTCTCAGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CAA 90 bp ATGAGGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGATGCTCAGGGCAGACTaGACGTCCATCTTCTGCCGC +
Preference number: 3 (lower is better)
Translates to: MRDLCEHLRPYTSTHLLPMLRAD*TSIFCR
Trigger: GCGGCAGAAGATGGACGTCAAGTCTGCCCTGAGCAT...CGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CAA 90 bp GCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCATTGGCTAGTCTGTCATaGAGCTGGCAGAGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: APTFPFQTIHHHGWKAAPLASLS*SWQSWA
Trigger: GGCCCAGCTCTGCCAGCTCAATGACAGACTAGCCAA...TGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590935.1
3UTR-3UTR CAA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCAAAGTTGGCATTGGTGTaGACGTGCATGAAGGACCTG +
Preference number: 3 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLAKLALV*TCMKDL
Trigger: CAGGTCCTTCATGCACGTCAACACCAATGCCAACTT...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590342.1
3UTR TCA 72 bp GCAGCCTTGCTGTGGGAATCTCCATCCACTAATAACTaGCGGACACCCCCACCCCAGCTTCGGACCTCAAGA +
Preference number: 3 (lower is better)
Translates to: AALLWESPSTNN*RTPPPQLRTSR
Trigger: TCTTGAGGTCCGAAGCTGGGGTGGGGGTGTCCGTCAGTTATTAGTGGATGGAGATTCCCACAGCAAGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR TCA 72 bp ATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCTaGGTCACTTCAGGGATCCCGTGCTGGCACCAGAGA +
Preference number: 3 (lower is better)
Translates to: IWTLRHVSCLPG*VTSGIPCWHQR
Trigger: TCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGGAGTGTCCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR GCA 72 bp AAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTaGCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGC +
Preference number: 3 (lower is better)
Translates to: KDPFGHSAMSHV*LAESLQGSRAG
Trigger: GCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR GCA 72 bp TTTCACTTGCTTCTCCGGGGCTGGATTGAGGGTAAGTaGAGTACACCTGGAGATCCCAGGGAGCCCCCTTCT +
Preference number: 3 (lower is better)
Translates to: FHLLLRGWIEGK*STPGDPREPPS
Trigger: AGAAGGGGGCTCCCTGGGATCTCCAGGTGTACTGCACTTACCCTCAATCCAGCCCCGGAGAAGCAAGTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR CCA 72 bp ATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTaGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCA +
Preference number: 3 (lower is better)
Translates to: IHLDTPPCLMSA*LSHFRDPVLAP
Trigger: TGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR CCA 72 bp AGCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTATaGAGCTGGACAACCCTGGGGGCCAGGCCCTTAATC +
Preference number: 3 (lower is better)
Translates to: SSKPKILPSSTL*SWTTLGARPLI
Trigger: GATTAAGGGCCTGGCCCCCAGGGTTGTCCAGCTCCATAAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CAA 90 bp CCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTGGCCCAGGACTGTGTaGGGACACACTTGTAGACAA +
Preference number: 3 (lower is better)
Translates to: PNHPSPWVEGSATCCPSYWPRTV*GHTCRQ
Trigger: TTGTCTACAAGTGTGTCCCAACACAGTCCTGGGCCA...ATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CAA 90 bp ACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTCTGAGGACCTTCTCTTaGCCCAGAGTGACCCTGAAG +
Preference number: 3 (lower is better)
Translates to: TFPFQTIHHHGWKAAPPALRTFS*PRVTLK
Trigger: CTTCAGGGTCACTCTGGGCAAAGAGAAGGTCCTCAG...AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CAA 90 bp ACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTTCTCCGGGGCTGGATaGAGGGTAAGTGCAGTACAC +
Preference number: 3 (lower is better)
Translates to: TNIPFPNHPSPWVEGSATFSGAG*RVSAVH
Trigger: GTGTACTGCACTTACCCTCAATCCAGCCCCGGAGAA...GGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR GCA 72 bp CAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTaGATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGG +
Preference number: 3 (lower is better)
Translates to: QGTDVVGRVACI*IVPLLGLKVLR
Trigger: CCTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR GCA 72 bp ACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTaGATTTGCATAGTTCCTTTACTAGGGCTCAAGGTG +
Preference number: 3 (lower is better)
Translates to: TVQGTDVVGRVA*ICIVPLLGLKV
Trigger: CACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR CCA 72 bp GGCACCAACATTCCCTTTCCAAACCATCCATCACCATaGGTGGAAGGCAGCGCCACCTGCTGCCCATCATAT +
Preference number: 3 (lower is better)
Translates to: GTNIPFPNHPSP*VEGSATCCPSY
Trigger: ATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
3UTR-3UTR CAA 90 bp TCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGGCTCCATTCAAATGCAGCCTaGCTGTGGGAATCTCCATCC +
Preference number: 3 (lower is better)
Translates to: SITMGGRQRHLLPIILWLHSNAA*LWESPS
Trigger: GGATGGAGATTCCCACAGCAAGGCTGCATTTGAATG...GAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CAA 90 bp CCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCTTTGGCTAGTCTGTCATaGAGCTGGCAGAGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: PPIKDPFGHSAMSHVCLALASLS*SWQSWA
Trigger: GGCCCAGCTCTGCCAGCTCAATGACAGACTAGCCAA...AGCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590342.1
ENST00000590935.1
3UTR CCA 72 bp CTCATTTGTAGGTGGTGGTTTCTGGATAACTCAGAGTaGCAGGGACACAGACGAGCCTCTCGAGCAGAGGTG +
Preference number: 3 (lower is better)
Translates to: LICRWWFLDNSE*QGHRRASRAEV
Trigger: CACCTCTGCTCGAGAGGCTCGTCTGTGTCCCTGCCACTCTGAGTTATCCAGAAACCACCACCTACAAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590753.1
3UTR-3UTR CAA 90 bp GGGGAGAGTGGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGCCCACAAGGCCTCTTaGTGTAGGGACCATTCATCC +
Preference number: 3 (lower is better)
Translates to: GESGLHLHSSFTRAQGVEAHKAS*CRDHSS
Trigger: GGATGAATGGTCCCTACACAAAGAGGCCTTGTGGGC...CTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CAA 90 bp GCAGTACACCTGGAGATCCCAGGGAGCCCCCTTCTTGAGAAAGAGTATCGTATGCTTTCACTTCCCTGCTaGTCTTCTGGCCGCGTTTCT +
Preference number: 3 (lower is better)
Translates to: AVHLEIPGSPLLEKEYRMLSLPC*SSGRVS
Trigger: AGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAG...CATACGATACTCTTTCTCAAGAAGGGGGCTCCCTGGGATCTCCAGGTGTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CAA 90 bp ATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTCAAGAGAGGATTCGCCAGGAAGCCATCGTaGGGGCCGATCTCACGGTTC +
Preference number: 3 (lower is better)
Translates to: IVPLLGLKVLRSTLKRGFARKPS*GPISRF
Trigger: GAACCGTGAGATCGGCCCCAACGATGGCTTCCTGGC...GAATCCTCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590342.1
ENST00000590935.1
3UTR TCA 72 bp TCAAGAGAGGATTCGGGAGTTGGGGAAGGGAGGTCATaGGGGACCTCTGTGAGCATCTTAGGCCTTACACTT +
Preference number: 3 (lower is better)
Translates to: SREDSGVGEGRS*GTSVSILGLTL
Trigger: AAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCATGACCTCCCTTCCCCAACTCCCGAATCCTCTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR GCA 72 bp CACATTCTAGCCTATGAGGGACCCACCCTTTTCACTTaGTTCTCCGGGGCTGGATTGAGGGTAAGTGCAGTA +
Preference number: 3 (lower is better)
Translates to: HILAYEGPTLFT*FSGAGLRVSAV
Trigger: TACTGCACTTACCCTCAATCCAGCCCCGGAGAAGCAAGTGAAAAGGGTGGGTCCCTCATAGGCTAGAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR CCA 72 bp GGCCTTGCGAGTGATCCTACCATGAATTCAGTCTTCTaGGAGCGTGACACACCCACCAGAACAATGCCCTAT +
Preference number: 3 (lower is better)
Translates to: GLASDPTMNSVF*ERDTPTRTMPY
Trigger: ATAGGGCATTGTTCTGGTGGGTGTGTCACGCTCCCAGAAGACTGAATTCATGGTAGGATCACTCGCAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR CCA 72 bp CCAACATTCCCTTTCCAAACCATCCATCACCATGGGTaGAAGGCAGCGCCACCTGCTGCCCATCATATTATG +
Preference number: 3 (lower is better)
Translates to: PTFPFQTIHHHG*KAAPPAAHHIM
Trigger: CATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
3UTR-3UTR CAA 90 bp GGGGAGAGTGGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGCTAGGGCTCAAGGTGTaGAGGTCCACACTCAAGAGA +
Preference number: 3 (lower is better)
Translates to: GESGLHLHSSFTRAQGVELGLKV*RSTLKR
Trigger: TCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAG...CTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CAA 90 bp ATGAGGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGGAGAGTGGCCTGCATTaGCATAGTTCCTTTACTAGG +
Preference number: 3 (lower is better)
Translates to: MRDLCEHLRPYTSTHLLPESGLH*HSSFTR
Trigger: CCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTC...CGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CAA 90 bp ATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGGGCCATCGGGAAGCATGGGAGGAGGGTTAGTTTaGAGTTTTCAACATGCCATC +
Preference number: 3 (lower is better)
Translates to: ILGLTLPHTSCRGPSGSMGGGLV*SFQHAI
Trigger: GATGGCATGTTGAAAACTCAAAACTAACCCTCCTCC...CATGCTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590342.1
3UTR-3UTR CAA 90 bp GGGGAGAGTGGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGCATTCAAATGCAGCCTaGCTGTGGGAATCTCCATCC +
Preference number: 3 (lower is better)
Translates to: GESGLHLHSSFTRAQGVEHSNAA*LWESPS
Trigger: GGATGGAGATTCCCACAGCAAGGCTGCATTTGAATG...CTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR GCA 72 bp TTTTCCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTaGTACATCCCACCTGGAGAAAGAGCTGCACATTCT +
Preference number: 3 (lower is better)
Translates to: FSRSRAESSTSG*YIPPGERAAHS
Trigger: AGAATGTGCAGCTCTTTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR GCA 72 bp CATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTaGCCATCATATTATGGCTCACATACCCATAATTTC +
Preference number: 3 (lower is better)
Translates to: HPSPWVEGSATC*PSYYGSHTHNF
Trigger: GAAATTATGGGTATGTGAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
3UTR GCA 72 bp AACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTaGTGCCCATCATATTATGGCTCACATACCCATAAT +
Preference number: 3 (lower is better)
Translates to: NHPSPWVEGSAT*CPSYYGSHTHN
Trigger: ATTATGGGTATGTGAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
3UTR-3UTR CAA 90 bp AGGAGCTCCTGGCCAACTCTGAAAAAGGCACATTCCCTACCTTGGCATATTAACCTAGGGCTCAAGGTGTaGAGGTCCACACTCAAGAGA +
Preference number: 3 (lower is better)
Translates to: RSSWPTLKKAHSLPWHINLGLKV*RSTLKR
Trigger: TCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAG...GTTAATATGCCAAGGTAGGGAATGTGCCTTTTTCAGAGTTGGCCAGGAGCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR TCA 72 bp TCCCAGGGAGCCCCCTTCTTGAGAAAGAGTATCGTATaGAAGAATCCAGCTTCAGGGAGCAGCAAACCCAAA +
Preference number: 3 (lower is better)
Translates to: SQGAPFLRKSIV*KNPASGSSKPK
Trigger: TTTGGGTTTGCTGCTCCCTGAAGCTGGATTCTTTCATACGATACTCTTTCTCAAGAAGGGGGCTCCCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR TCA 72 bp TGCAGTACACCTGGAGATCCCAGGGAGCCCCCTTCTTaGGAAAGAGTATCGTATGAAAGAATCCAGCTTCAG +
Preference number: 3 (lower is better)
Translates to: CSTPGDPREPPS*ERVSYERIQLQ
Trigger: CTGAAGCTGGATTCTTTCATACGATACTCTTTCTCAAGAAGGGGGCTCCCTGGGATCTCCAGGTGTACTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR CCA 72 bp CTCATTTGTAGGTGGTGGTTTCTGGATAACTCAGAGTaGCAGGGACACAGACGAGCCTGTGGAAAGGTATAC +
Preference number: 3 (lower is better)
Translates to: LICRWWFLDNSE*QGHRRACGKVY
Trigger: GTATACCTTTCCACAGGCTCGTCTGTGTCCCTGCCACTCTGAGTTATCCAGAAACCACCACCTACAAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CAA 90 bp ATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTCAAGAGAGGATTCACGAGTGGCTTGGGCTaGCCAACACTACAATTCAGG +
Preference number: 3 (lower is better)
Translates to: IVPLLGLKVLRSTLKRGFTSGLG*PTLQFR
Trigger: CCTGAATTGTAGTGTTGGCAAGCCCAAGCCACTCGT...GAATCCTCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR-3UTR CAA 90 bp ATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTCAAGAGAGGATTCCTTTCACTTCCCTGCTaGTCTTCTGGCCGCGTTTCT +
Preference number: 3 (lower is better)
Translates to: IVPLLGLKVLRSTLKRGFLSLPC*SSGRVS
Trigger: AGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAG...GAATCCTCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR GCA 72 bp ATCTGGAGAAGAAGACACATACTGGTTGTTCAGGGCTaGTGTGGTCACAGAGAAAAGCGGACAGCAAATGAC +
Preference number: 3 (lower is better)
Translates to: IWRRRHILVVQG*CGHREKRTAND
Trigger: GTCATTTGCTGTCCGCTTTTCTCTGTGACCACAGCAGCCCTGAACAACCAGTATGTGTCTTCTTCTCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR GCA 72 bp AGAAAACCATTTGGCGCTCTAATTTTGCCTGGATGGTaGTCTGTCAGTCAAAGAAAGGGAACAGGTCTGGGG +
Preference number: 3 (lower is better)
Translates to: RKPFGALILPGW*SVSQRKGTGLG
Trigger: CCCCAGACCTGTTCCCTTTCTTTGACTGACAGAGCACCATCCAGGCAAAATTAGAGCGCCAAATGGTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CAA 90 bp ATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTCAAGAGAGGATTCGAGAGTGGCCTGCATTaGCATAGTTCCTTTACTAGG +
Preference number: 3 (lower is better)
Translates to: IVPLLGLKVLRSTLKRGFESGLH*HSSFTR
Trigger: CCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTC...GAATCCTCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
3UTR GCA 72 bp TGGCAGGGACACAGACGAGCCTGTGGAAAGGTATACTaGTTTAAGATTGAGAAGAAAACCATTTGGCGCTCT +
Preference number: 3 (lower is better)
Translates to: WQGHRRACGKVY*FKIEKKTIWRS
Trigger: AGAGCGCCAAATGGTTTTCTTCTCAATCTTAAAGCAGTATACCTTTCCACAGGCTCGTCTGTGTCCCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CAA 90 bp AGCATCTTAACTTGTGGCACAAAAGGCACCAACATTCCCTTTCCAAACCATCCAGAGAGTGGCCTGCATTaGCATAGTTCCTTTACTAGG +
Preference number: 3 (lower is better)
Translates to: SILTCGTKGTNIPFPNHPESGLH*HSSFTR
Trigger: CCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTC...TGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTGTGCCACAAGTTAAGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR CCA 72 bp AGAAGAAAACCATTTGGCGCTCTAATTTTGCCTGGATaGTGCTCTGTCAGTCAAAGAAAGGGAACAGGTCTG +
Preference number: 3 (lower is better)
Translates to: RRKPFGALILPG*CSVSQRKGTGL
Trigger: CAGACCTGTTCCCTTTCTTTGACTGACAGAGCACCATCCAGGCAAAATTAGAGCGCCAAATGGTTTTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR-3UTR CAA 90 bp CCCAGAGTGACCCTGAAGATAAATAGCATCACAATCACTTTCCATAATAACAATGCCCACAAGGCCTCTTaGTGTAGGGACCATTCATCC +
Preference number: 3 (lower is better)
Translates to: PRVTLKINSITITFHNNNAHKAS*CRDHSS
Trigger: GGATGAATGGTCCCTACACAAAGAGGCCTTGTGGGC...ATTGTTATTATGGAAAGTGATTGTGATGCTATTTATCTTCAGGGTCACTCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR TCA 72 bp GTAACTGGGTCCTCAGAGTATCGTGAAAATCCAACTTaGGGCTTTCCAAGGCTGTACAGGCATGCTAATATA +
Preference number: 3 (lower is better)
Translates to: VTGSSEYRENPT*GFPRLYRHANI
Trigger: TATATTAGCATGCCTGTACAGCCTTGGAAAGCCTCAAGTTGGATTTTCACGATACTCTGAGGACCCAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590342.1
3UTR GCA 72 bp CAGTCTTCTGGGAGCGTGACACACCCACCAGAACAATaGCCTATATATATTTGGTGCTCAAAAAGTGTTTAC +
Preference number: 3 (lower is better)
Translates to: QSSGSVTHPPEQ*PIYIWCSKSVY
Trigger: GTAAACACTTTTTGAGCACCAAATATATATAGGGCATTGTTCTGGTGGGTGTGTCACGCTCCCAGAAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR CCA 72 bp TTTAGAGGATGGCCATTTCACTTAGGTGGGTTTATCTaGACACCTTTTTCACTATCTGGAGAAGAAGACACA +
Preference number: 3 (lower is better)
Translates to: FRGWPFHLGGFI*TPFSLSGEEDT
Trigger: TGTGTCTTCTTCTCCAGATAGTGAAAAAGGTGTCCAGATAAACCCACCTAAGTGAAATGGCCATCCTCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGACCTCTCGAGCATCCACCTTATGGAGCTaGACAACCCTGGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HGSSGHLCPRPPPRTSRASTLWS*TTLGAR
Trigger: CCTGGCCCCCAGGGTTGTCCAGCTCCATAAGGTGGA...TGCTCGAGAGGTCCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp CATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGACCTCTCGAGCACAGAGGTGGTGGGGGTaGCCTAGGGTTTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: HGSSGHLCPRPPPRTSRAQRWWG*PRVSTS
Trigger: GGAAGTTGAAACCCTAGGGCACCCCCACCACCTCTG...TGCTCGAGAGGTCCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp GCCGGGAGTGAGGCCTTACGCCACACCTGCCTCTCCGTGTCCCAGCCAGGAGCTCCTATGCACAGGGTGTaGAAGGCTGTGGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: AGSEALRHTCLSVSQPGAPMHRV*KAVGTV
Trigger: CACTGTCCCCACAGCCTTCCACACCCTGTGCATAGG...AGCTCCTGGCTGGGACACGGAGAGGCAGGTGTGGCGTAAGGCCTCACTCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp TGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGCGTAGATCCGCGGGGTaGCCTCGTTGCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CLMSAWLSHFRDPVLAPERRSAG*PRCRAG
Trigger: GCCAGCCCTGCAACGAGGTCACCCCGCGGATCTACG...CTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590342.1
CDS-3UTR GCA 90 bp TGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGCTCGGGACACCTTTaGCCACGGCCTCCCCCACGG +
Preference number: 4 (lower is better)
Translates to: CLMSAWLSHFRDPVLAPESSGHL*PRPPPR
Trigger: CCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCT...CTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR TCA 90 bp CATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGACCTCTCGAGCAAGTCTTCTGGGAGCGTaGCACACCCACCAGAACAAT +
Preference number: 4 (lower is better)
Translates to: HGSSGHLCPRPPPRTSRASLLGA*HTHQNN
Trigger: ATTGTTCTGGTGGGTGTGTCACGCTCCCAGAAGACT...TGCTCGAGAGGTCCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp GAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGGGCCATCGGGAAGGAGCCACAGACGCGTTaGCCACGTAGATCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: EHLRPYTSTHLLPWAIGKEPQTR*PRRSAG
Trigger: CCCCGCGGATCTACGTGGGCAACGCGTCTGTGGCTC...CTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226004.8
CDS-3UTR GCA 90 bp CATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGACCTCTCGAGCAGCAAGCTTCTTTATGTaGTCCCCAGGGTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: HGSSGHLCPRPPPRTSRAASFFM*SPGWGK
Trigger: CTTTCCCCACCCTGGGGAGCACATAAAGAAGCTTGC...TGCTCGAGAGGTCCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp CATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGCTGCTTCCACACACCTCCTaGCGTGGGCCATCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: HVCLAESLQGSRAGTRELLPHTS*RGPSGS
Trigger: GCTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAG...CAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp CATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGACCTCTCGAGCAGACCTTTCACTTCCCTaGTTGTCTTCTGGCCGCGTT +
Preference number: 4 (lower is better)
Translates to: HGSSGHLCPRPPPRTSRADLSLP*LSSGRV
Trigger: AACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC...TGCTCGAGAGGTCCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp CATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGCTGTGCAGGGCACAGACGTaGTGGGGAGAGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: HVCLAESLQGSRAGTRELCRAQT*WGEWPA
Trigger: TGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCA...CAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp GTGTTTCCTAAACATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGTCCACCTTATGGAGCTaGACAACCCTGGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VFPKHGSSGHLCPRPPPRSTLWS*TTLGAR
Trigger: CCTGGCCCCCAGGGTTGTCCAGCTCCATAAGGTGGA...CCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATGTTTAGGAAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp GACCTTTCACTTCCCTGCTTGTCTTCTGGCCGCGTTTCTGAGAGGCACGCCCCCGGGGAAGGGAGGTCATaGGGGACCTCTGTGAGCATC +
Preference number: 4 (lower is better)
Translates to: DLSLPCLSSGRVSERHAPGEGRS*GTSVSI
Trigger: GATGCTCACAGAGGTCCCTCATGACCTCCCTTCCCC...GGGGGCGTGCCTCTCAGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR TCA 90 bp GACCTTTCACTTCCCTGCTTGTCTTCTGGCCGCGTTTCTGAGAGGCACGCCCCCAGGTGGAGGTTGCGGTaGGCCAAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: DLSLPCLSSGRVSERHAPRWRLR*AKIAPL
Trigger: CAATGGCGCGATCTTGGCTCACCGCAACCTCCACCT...GGGGGCGTGCCTCTCAGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590935.1
CDS-3UTR CCA 90 bp GACCTTTCACTTCCCTGCTTGTCTTCTGGCCGCGTTTCTGAGAGGCACGCCCCCATGTGCTCCCCAGGGTaGGGAAAGTGGCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: DLSLPCLSSGRVSERHAPMCSPG*GKWPRT
Trigger: AGTCCTGGGCCACTTTCCCCACCCTGGGGAGCACAT...GGGGGCGTGCCTCTCAGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp GGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAGTTGGGTGTGGAAGGCTGTaGGGACAGTGCAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: GTVQGTDVVGRVACICIVGCGRL*GQCRAQ
Trigger: CTGTGCCCTGCACTGTCCCCACAGCCTTCCACACCC...AACTATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR TCA 90 bp CATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGCTGCCATCCACTAATAACTaGCGGACACCCCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: HVCLAESLQGSRAGTRELPSTNN*RTPPPQ
Trigger: CTGGGGTGGGGGTGTCCGTCAGTTATTAGTGGATGG...CAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR TCA 90 bp GTGGGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATATCATGTCTGCCTGGCTaGGTCACTTCAGGGATCCCG +
Preference number: 4 (lower is better)
Translates to: VGTVQGTDVVGRVACICISCLPG*VTSGIP
Trigger: CGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGA...TATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR TCA 90 bp ACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCTGTCCCATGGGGTaGCCACTGCCTGGTCATGGG +
Preference number: 4 (lower is better)
Translates to: TFPFQTIHHHGWKAAPPAACPMG*PLPGHG
Trigger: CCCATGACCAGGCAGTGGTCACCCCATGGGACAGGC...AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp GCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCAGCCTGTCCCATGGGGTaGCCACTGCCTGGTCATGGG +
Preference number: 4 (lower is better)
Translates to: APTFPFQTIHHHGWKAAPACPMG*PLPGHG
Trigger: CCCATGACCAGGCAGTGGTCACCCCATGGGACAGGC...TGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp CCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAAAGCTACTTGGGAGGCTaGGGCGGGAGGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PGAEQKALLRGATSHLEKSYLGG*GGRLRQ
Trigger: CTGCCTCAGCCTCCCGCCTCAGCCTCCCAAGTAGCT...TTTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590935.1
CDS-3UTR GCA 90 bp GACCTTTCACTTCCCTGCTTGTCTTCTGGCCGCGTTTCTGAGAGGCACGCCCCCCAGAGGTGGTGGGGGTaGCCTAGGGTTTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: DLSLPCLSSGRVSERHAPQRWWG*PRVSTS
Trigger: GGAAGTTGAAACCCTAGGGCACCCCCACCACCTCTG...GGGGGCGTGCCTCTCAGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp CATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGCTGCAGAGGTGGTGGGGGTaGCCTAGGGTTTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: HVCLAESLQGSRAGTRELQRWWG*PRVSTS
Trigger: GGAAGTTGAAACCCTAGGGCACCCCCACCACCTCTG...CAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp GTGGGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAGCTGTAAGAGCCACCTaGAATGGGCAGGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: VGTVQGTDVVGRVACICIAVRAT*NGQGVC
Trigger: GCACACACCCTGCCCATTGCAGGTGGCTCTTACAGC...TATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp TCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGGCTCCCATGGGGTGACCACTaGCTGGTCATGGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SITMGGRQRHLLPIILWLPWGDH*LVMGGE
Trigger: CTCCCCTCCCATGACCAGGCAGTGGTCACCCCATGG...GAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp GTGTTTCCTAAACATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGCCAGCCACACCAACCTaGTGTGTTCGCGTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: VFPKHGSSGHLCPRPPPRPATPT*CVRVSS
Trigger: GCTACTTACGCGAACACAGCAGGTTGGTGTGGCTGG...CCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATGTTTAGGAAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp CACTTGCTTCTCCGGGGCTGGATTGAGGGTAAGTGCAGTACACCTGGAGATCCCCTGGGAGGTGGAGGTTaGGGTGAGCCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: HLLLRGWIEGKCSTPGDPLGGGG*GEPRSR
Trigger: GCGCGATCTTGGCTCACCGCAACCTCCACCTCCCAG...GGGATCTCCAGGTGTACTGCACTTACCCTCAATCCAGCCCCGGAGAAGCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590935.1
CDS-3UTR CCA 90 bp AAGGCAGCGCCACCTGCTGCCCATCATATTATGGCTCACATACCCATAATTTCCCGAACGAGCCCGACATaGCGGCGGCGGGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: KAAPPAAHHIMAHIPIISRTSPT*RRRGPA
Trigger: TGCAGGGCCCCGCCGCCGCCATGTCGGGCTCGTTCG...GGAAATTATGGGTATGTGAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226004.8
CDS-3UTR CCA 90 bp CATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGCTGCCAGGAAGCCATCGTTaGGGCCGATCTCACGGTTCT +
Preference number: 4 (lower is better)
Translates to: HVCLAESLQGSRAGTRELPGSHR*GRSHGS
Trigger: AGAACCGTGAGATCGGCCCCAACGATGGCTTCCTGG...CAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp GACCTTTCACTTCCCTGCTTGTCTTCTGGCCGCGTTTCTGAGAGGCACGCCCCCCCAGGAAGCCATCGTTaGGGCCGATCTCACGGTTCT +
Preference number: 4 (lower is better)
Translates to: DLSLPCLSSGRVSERHAPPGSHR*GRSHGS
Trigger: AGAACCGTGAGATCGGCCCCAACGATGGCTTCCTGG...GGGGGCGTGCCTCTCAGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp GACCTTTCACTTCCCTGCTTGTCTTCTGGCCGCGTTTCTGAGAGGCACGCCCCCCCTATGCACAGGGTGTaGAAGGCTGTGGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: DLSLPCLSSGRVSERHAPPMHRV*KAVGTV
Trigger: CACTGTCCCCACAGCCTTCCACACCCTGTGCATAGG...GGGGGCGTGCCTCTCAGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp GAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGGGCCATCGGGAAGAAGAGCCACCTGCAATaGGCAGGGTGTGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EHLRPYTSTHLLPWAIGKKSHLQ*AGCVPG
Trigger: CCCAGGCACACACCCTGCCCATTGCAGGTGGCTCTT...CTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp GCAGTACACCTGGAGATCCCAGGGAGCCCCCTTCTTGAGAAAGAGTATCGTATGGGGGTGACCACTGCCTaGTCATGGGAGGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: AVHLEIPGSPLLEKEYRMGVTTA*SWEGSP
Trigger: GGGGCTCCCCTCCCATGACCAGGCAGTGGTCACCCC...CATACGATACTCTTTCTCAAGAAGGGGGCTCCCTGGGATCTCCAGGTGTACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp GGGGAGAGTGGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGCGTAGATCCGCGGGGTaGCCTCGTTGCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GESGLHLHSSFTRAQGVERRSAG*PRCRAG
Trigger: GCCAGCCCTGCAACGAGGTCACCCCGCGGATCTACG...CTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590342.1
CDS-3UTR TCA 90 bp CATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGACCTCTCGAGCAATTTCCTTGCGGTGCTaGATTCCAAGTGGGGATTAT +
Preference number: 4 (lower is better)
Translates to: HGSSGHLCPRPPPRTSRAISLRC*IPSGDY
Trigger: ATAATCCCCACTTGGAATTCAGCACCGCAAGGAAAT...TGCTCGAGAGGTCCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCAGTCCCTCACACACTCTaGGCCACCATTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLAVPHTL*ATISSS
Trigger: AGAGGAGGAAATGGTGGCTCAGAGTGTGTGAGGGAC...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590342.1
CDS-3UTR GCA 90 bp GCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCAGCCTTACGCCACACCTaGCTCTCCGTGTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: APTFPFQTIHHHGWKAAPALRHT*LSVSQP
Trigger: TGGCTGGGACACGGAGAGGCAGGTGTGGCGTAAGGC...TGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp ACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCCTGGGAGGTGGAGGTTaGGGTGAGCCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: TNIPFPNHPSPWVEGSATLGGGG*GEPRSR
Trigger: GCGCGATCTTGGCTCACCGCAACCTCCACCTCCCAG...GGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590753.1
ENST00000590935.1
CDS-3UTR CCA 90 bp ACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGGGGTGTGGAAGGCTGTaGGGACAGTGCAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: TIHHHGWKAAPPAAHHIMGCGRL*GQCRAQ
Trigger: CTGTGCCCTGCACTGTCCCCACAGCCTTCCACACCC...CATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGACCTCTCGAGCAAATGCAGCCTTGCTGTaGGAATCTCCATCCACTAAT +
Preference number: 4 (lower is better)
Translates to: HGSSGHLCPRPPPRTSRANAALL*ESPSTN
Trigger: ATTAGTGGATGGAGATTCCCACAGCAAGGCTGCATT...TGCTCGAGAGGTCCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp GAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGGGCCATCGGGAAGAACCATCCATCACCATaGGTGGAAGGCAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: EHLRPYTSTHLLPWAIGKNHPSP*VEGSAT
Trigger: GGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTT...CTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp ACAGTGTGTTTCCTAAACATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCAACCATCCATCACCATaGGTGGAAGGCAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: TVCFLNMAARDTFAHGLPNHPSP*VEGSAT
Trigger: GGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTT...GGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATGTTTAGGAAACACACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp ATGAGGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGGGGGAAGGGAGGTCATaGGGGACCTCTGTGAGCATC +
Preference number: 4 (lower is better)
Translates to: MRDLCEHLRPYTSTHLLPGEGRS*GTSVSI
Trigger: GATGCTCACAGAGGTCCCTCATGACCTCCCTTCCCC...CGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR TCA 90 bp ATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGGGCCATCGGGAAGCATGTCGGACCTCAAGACGTaGGAGGGCTGCCTATGCACA +
Preference number: 4 (lower is better)
Translates to: ILGLTLPHTSCRGPSGSMSDLKT*EGCLCT
Trigger: TGTGCATAGGCAGCCCTCTCACGTCTTGAGGTCCGA...CATGCTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR TCA 90 bp CATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGCTGGCACATTCTAGCCTATaGGGGACCCACCCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: HVCLAESLQGSRAGTRELAHSSL*GTHPFH
Trigger: GTGAAAAGGGTGGGTCCCTCATAGGCTAGAATGTGC...CAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp CCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTAGGTGGAGGTTGCGGTaGGCCAAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: PTFPFQTIHHHGWKAAPPRWRLR*AKIAPL
Trigger: CAATGGCGCGATCTTGGCTCACCGCAACCTCCACCT...AGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590753.1
ENST00000590935.1
CDS-3UTR GCA 90 bp GGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTAGCTCGGGACACCTTTaGCCACGGCCTCCCCCACGG +
Preference number: 4 (lower is better)
Translates to: GLHLHSSFTRAQGVEVHTSSGHL*PRPPPR
Trigger: CCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCT...AGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCAAGGGTTCTCCAGGTTTaGCCACAAGGCCTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLARVLQV*PQGLFV
Trigger: CACAAAGAGGCCTTGTGGGCAAACCTGGAGAACCCT...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCAGCCATGTCTCATGTCTaGCTGGCTGAGTCACTTCAG +
Preference number: 4 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLAAMSHV*LAESLQ
Trigger: CTGAAGTGACTCAGCCAGGCAGACATGAGACATGGC...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp CCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTTGAGCTGGCAGAGCTaGGCCAGGAAGCCATCGTTG +
Preference number: 4 (lower is better)
Translates to: PNHPSPWVEGSATCCPSYLSWQS*ARKPSL
Trigger: CAACGATGGCTTCCTGGCCCAGCTCTGCCAGCTCAA...ATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR CCA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCAGGCCCAGGACTGTGTTaGGACACACTTGTAGACAAG +
Preference number: 4 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLAGPGLC*DTLVDK
Trigger: CTTGTCTACAAGTGTGTCCCAACACAGTCCTGGGCC...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp GCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTATGGAGCTGGACAACCCTGGATGTGCTCCCCAGGGTaGGGAAAGTGGCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: AANPKSCPAPPYGAGQPWMCSPG*GKWPRT
Trigger: AGTCCTGGGCCACTTTCCCCACCCTGGGGAGCACAT...CCAGGGTTGTCCAGCTCCATAAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp GGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGAGACTTTTGCAGGGCACAGACGTaGTGGGGAGAGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GTAPIRSWACVGSYTRDFCRAQT*WGEWPA
Trigger: TGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCA...AAAGTCTCTTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp ACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCAAGAGCCACCTGCAATaGGCAGGGTGTGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TNIPFPNHPSPWVEGSATKSHLQ*AGCVPG
Trigger: CCCAGGCACACACCCTGCCCATTGCAGGTGGCTCTT...GGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTCCCAGCTCCACCTTATaGAGCTGGACAACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PTFPFQTIHHHGWKAAPPPSSTL*SWTTLG
Trigger: CCCCAGGGTTGTCCAGCTCCATAAGGTGGAGCTGGG...AGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAACCCAGCTCCACCTTATaGAGCTGGACAACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGAEQKALLRGATSHLEKPSSTL*SWTTLG
Trigger: CCCCAGGGTTGTCCAGCTCCATAAGGTGGAGCTGGG...TTTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp AAAGAATCCAGCTTCAGGGAGCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTGGGGTGACCACTGCCTaGTCATGGGAGGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: KESSFREQQTQNLAQLHLGVTTA*SWEGSP
Trigger: GGGGCTCCCCTCCCATGACCAGGCAGTGGTCACCCC...AAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGCTCCCTGAAGCTGGATTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp AAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTAGCTGTGCCTGTCCCATaGGGTGACCACTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: KPSITMGGRQRHLLPIILAVPVP*GDHCLV
Trigger: GACCAGGCAGTGGTCACCCCATGGGACAGGCACAGC...TAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGGCTCCCATCCGCAGCTaGGCATGTGTTGGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: HSLSKPSITMGGRQRHLLAPIRS*ACVGSY
Trigger: GTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGC...CAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp GCCGGGAGTGAGGCCTTACGCCACACCTGCCTCTCCGTGTCCCAGCCAGGAGCTCTCATTTGTAGGTGGTaGTTTCTGGATAACTCAGAG +
Preference number: 4 (lower is better)
Translates to: AGSEALRHTCLSVSQPGALICRW*FLDNSE
Trigger: CTCTGAGTTATCCAGAAACCACCACCTACAAATGAG...AGCTCCTGGCTGGGACACGGAGAGGCAGGTGTGGCGTAAGGCCTCACTCCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR CAA 72 bp GGACCCACCCTTTTCACTTGCTTCTCCGGGGCTGGATaGAGGGTAAGTGCAGTACACCTGGAGATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GPTLFTCFSGAG*RVSAVHLEIPG
Trigger: CCCTGGGATCTCCAGGTGTACTGCACTTACCCTCAATCCAGCCCCGGAGAAGCAAGTGAAAAGGGTGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp GGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAGTTACCCGGCCATTCTTTTaGGCCAAAGCCTGGTCAATG +
Preference number: 4 (lower is better)
Translates to: GTVQGTDVVGRVACICIVTRPFF*AKAWSM
Trigger: CATTGACCAGGCTTTGGCTCAAAAGAATGGCCGGGT...AACTATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590342.1
CDS-3UTR TCA 90 bp GCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTATGGAGCTGGACAACCCTGGTGCTCAGGGCAGACTTaGCGTCCATCTTCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: AANPKSCPAPPYGAGQPWCSGQT*RPSSAA
Trigger: TGCGGCAGAAGATGGACGTCAAGTCTGCCCTGAGCA...CCAGGGTTGTCCAGCTCCATAAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp ATGAGGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGCTCAGGGCAGACTTaGCGTCCATCTTCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: MRDLCEHLRPYTSTHLLPCSGQT*RPSSAA
Trigger: TGCGGCAGAAGATGGACGTCAAGTCTGCCCTGAGCA...CGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR TCA 90 bp ACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTTGCTCAGGGCAGACTTaGCGTCCATCTTCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: TFPFQTIHHHGWKAAPPACSGQT*RPSSAA
Trigger: TGCGGCAGAAGATGGACGTCAAGTCTGCCCTGAGCA...AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR TCA 90 bp AGCTCCCTAGCCTTTTCCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACTGCTCAGGGCAGACTTaGCGTCCATCTTCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SSLAFSRSRAESSTSGCYCSGQT*RPSSAA
Trigger: TGCGGCAGAAGATGGACGTCAAGTCTGCCCTGAGCA...GTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGGAAAAGGCTAGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp ACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGTCGGACCTCAAGACGTaGGAGGGCTGCCTATGCACA +
Preference number: 4 (lower is better)
Translates to: TIHHHGWKAAPPAAHHIMSDLKT*EGCLCT
Trigger: TGTGCATAGGCAGCCCTCTCACGTCTTGAGGTCCGA...CATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp ATGAGGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGCCATCCACTAATAACTaGCGGACACCCCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: MRDLCEHLRPYTSTHLLPPSTNN*RTPPPQ
Trigger: CTGGGGTGGGGGTGTCCGTCAGTTATTAGTGGATGG...CGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR TCA 90 bp ACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGTCATGTCTGCCTGGCTaGGTCACTTCAGGGATCCCG +
Preference number: 4 (lower is better)
Translates to: TIHHHGWKAAPPAAHHIMSCLPG*VTSGIP
Trigger: CGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGA...CATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp CACAAAAGGCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCTTCCCAGCCGGGAGTaGGGCCTTACGCCACACCTG +
Preference number: 4 (lower is better)
Translates to: HKRHQHSLSKPSITMGGRLPSRE*GLTPHL
Trigger: CAGGTGTGGCGTAAGGCCTCACTCCCGGCTGGGAAG...CCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp GCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCGATCTCACGGTTCTaGCTCACGATGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: APTFPFQTIHHHGWKAAPPISRF*LTMLRA
Trigger: TGCCCTGAGCATCGTGAGGCAGAACCGTGAGATCGG...TGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR GCA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACGAGTGGCTTGGGCTTaGCAACACTACAATTCAGGA +
Preference number: 4 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLARVAWA*QHYNSG
Trigger: TCCTGAATTGTAGTGTTGGCAAGCCCAAGCCACTCG...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp CACCTGGAGAAAGAGCTGCACATTCTAGCCTATGAGGGACCCACCCTTTTCACTGCCTTACGCCACACCTaGCTCTCCGTGTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HLEKELHILAYEGPTLFTALRHT*LSVSQP
Trigger: TGGCTGGGACACGGAGAGGCAGGTGTGGCGTAAGGC...AGTGAAAAGGGTGGGTCCCTCATAGGCTAGAATGTGCAGCTCTTTCTCCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp GACCTTTCACTTCCCTGCTTGTCTTCTGGCCGCGTTTCTGAGAGGCACGCCCCCCTGGTTGTTCAGGGCTaGTGTGGTCACAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: DLSLPCLSSGRVSERHAPLVVQG*CGHREK
Trigger: CTTTTCTCTGTGACCACAGCAGCCCTGAACAACCAG...GGGGGCGTGCCTCTCAGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCATGGATTGAGGGTAAGTaGAGTACACCTGGAGATCCC +
Preference number: 4 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLAWIEGK*STPGDP
Trigger: GGGATCTCCAGGTGTACTGCACTTACCCTCAATCCA...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp GAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGGGCCATCGGGAAGAGCTCTACTTCGGGGTaGTACATCCCACCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: EHLRPYTSTHLLPWAIGKSSTSG*YIPPGE
Trigger: TTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCT...CTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp CTGTCCAGGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGGGCAGCGCCACCTGCTaGCCATCATATTATGGCTCA +
Preference number: 4 (lower is better)
Translates to: LSRNSSHPQLGMCWLLHKGSATC*PSYYGS
Trigger: TGAGCCATAATATGATGGGCAGCAGGTGGCGCTGCC...CTTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCCTGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp GGTTTCTGGATAACTCAGAGTGGCAGGGACACAGACGAGCCTCTCGAGCAGAGGAGTCTGTCATTGAGCTaGCAGAGCTGGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GFWITQSGRDTDEPLEQRSLSLS*QSWARK
Trigger: CTTCCTGGCCCAGCTCTGCCAGCTCAATGACAGACT...CCTCTGCTCGAGAGGCTCGTCTGTGTCCCTGCCACTCTGAGTTATCCAGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590753.1
CDS-3UTR CCA 90 bp ACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGAGGGCACAGACGTGGTaGGGAGAGTGGCCTGCATTT +
Preference number: 4 (lower is better)
Translates to: TIHHHGWKAAPPAAHHIMRAQTW*GEWPAF
Trigger: AAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCT...CATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp TCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGGCTCTCAGGGATCCCGTGCTaGCACCAGAGAGCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: SITMGGRQRHLLPIILWLSGIPC*HQRAVR
Trigger: TCTTACAGCTCTCTGGTGCCAGCACGGGATCCCTGA...GAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCATGTCTCATGTCTGCCTaGCTGAGTCACTTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLACLMSA*LSHFRD
Trigger: ATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACA...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp CATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGCTGATGAATTCAGTCTTCTaGGAGCGTGACACACCCACC +
Preference number: 4 (lower is better)
Translates to: HVCLAESLQGSRAGTRELMNSVF*ERDTPT
Trigger: GGTGGGTGTGTCACGCTCCCAGAAGACTGAATTCAT...CAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp ACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGGCTCCCATCCGCAGCTaGGCATGTGTTGGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: TIHHHGWKAAPPAAHHIMAPIRS*ACVGSY
Trigger: GTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGC...CATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp TTCCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAATCCATCACCATGGGTaGAAGGCAGCGCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: FQEQSRKLYFGVLHPTWRIHHHG*KAAPPA
Trigger: AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGAT...TCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACAGAGCAGCAGATTCTaGACTCAAGGCTTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLAQSSRF*TQGFQR
Trigger: TCTTTGGAAGCCTTGAGTTCAGAATCTGCTGCTCTG...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR TCA 90 bp GTGGGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATACAGAGCAGCAGATTCTaGACTCAAGGCTTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: VGTVQGTDVVGRVACICIQSSRF*TQGFQR
Trigger: TCTTTGGAAGCCTTGAGTTCAGAATCTGCTGCTCTG...TATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR TCA 90 bp CTGTCCAGGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGGCTCCTGGCCAACTCTaGAAAAGGCACATTCCCTAC +
Preference number: 4 (lower is better)
Translates to: LSRNSSHPQLGMCWLLHKAPGQL*KRHIPY
Trigger: GTAGGGAATGTGCCTTTTTCAGAGTTGGCCAGGAGC...CTTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCCTGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp GCTGTCCAGGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGCACATTCTAGCCTATaGGGGACCCACCCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: AVQEQLPSAAGHVLALTQAHSSL*GTHPFH
Trigger: GTGAAAAGGGTGGGTCCCTCATAGGCTAGAATGTGC...TTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCCTGGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp CATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCGGTTAGCCCTTCAGTaGTTCCTGACACCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: HSLSKPSITMGGRQRHLLRLALQ*FLTPVL
Trigger: CAGAACTGGTGTCAGGAATCACTGAAGGGCTAACCG...CAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR TCA 90 bp GGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAGTTATGCCATCCTTGGGCTaGGCCATGAAGCTTAGGATT +
Preference number: 4 (lower is better)
Translates to: GTVQGTDVVGRVACICIVMPSLG*AMKLRI
Trigger: AATCCTAAGCTTCATGGCTCAGCCCAAGGATGGCAT...AACTATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590342.1
CDS-3UTR GCA 90 bp AGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAAGAGCTGCACCGATCTCACGGTTCTaGCTCACGATGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RAESSTSGCYIPPGERAAPISRF*LTMLRA
Trigger: TGCCCTGAGCATCGTGAGGCAGAACCGTGAGATCGG...TGCAGCTCTTTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp AAAGAATCCAGCTTCAGGGAGCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTCTTCCACACACCTCCTaGCGTGGGCCATCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: KESSFREQQTQNLAQLHLLPHTS*RGPSGS
Trigger: GCTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAG...AAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGCTCCCTGAAGCTGGATTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp GACCTTTCACTTCCCTGCTTGTCTTCTGGCCGCGTTTCTGAGAGGCACGCCCCCGTGGGGAGAGTGGCCTaGATTTGCATAGTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: DLSLPCLSSGRVSERHAPVGRVA*ICIVPL
Trigger: TAAAGGAACTATGCAAATGCAGGCCACTCTCCCCAC...GGGGGCGTGCCTCTCAGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp GCTGTCCAGGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAACCCCACACACATCCATaGACACACGCTGTAATTGGC +
Preference number: 4 (lower is better)
Translates to: AVQEQLPSAAGHVLALTQPHTHP*THAVIG
Trigger: GCCAATTACAGCGTGTGTGCATGGATGTGTGTGGGG...TTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCCTGGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp GCAGTACACCTGGAGATCCCAGGGAGCCCCCTTCTTGAGAAAGAGTATCGTATGGCTGTAAGAGCCACCTaGAATGGGCAGGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: AVHLEIPGSPLLEKEYRMAVRAT*NGQGVC
Trigger: GCACACACCCTGCCCATTGCAGGTGGCTCTTACAGC...CATACGATACTCTTTCTCAAGAAGGGGGCTCCCTGGGATCTCCAGGTGTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp CATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGTATCAGACACCTATGTaGAAGGTGCTGGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: HSLSKPSITMGGRQRHLLYQTPM*KVLGAW
Trigger: CCATGCCCCCAGCACCTTGCACATAGGTGTCTGATA...CAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp CCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATCAGACACCTATGTaGAAGGTGCTGGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: PNHPSPWVEGSATCCPSYYQTPM*KVLGAW
Trigger: CCATGCCCCCAGCACCTTGCACATAGGTGTCTGATA...ATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp TGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGCTGGTTGTTCAGGGCTaGTGTGGTCACAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: CLMSAWLSHFRDPVLAPELVVQG*CGHREK
Trigger: CTTTTCTCTGTGACCACAGCAGCCCTGAACAACCAG...CTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp ATGAGGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGCCAGCCACACCAACCTaGTGTGTTCGCGTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: MRDLCEHLRPYTSTHLLPPATPT*CVRVSS
Trigger: GCTACTTACGCGAACACAGCAGGTTGGTGTGGCTGG...CGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp AGCTCCCTAGCCTTTTCCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACGAAGGCAGCGCCACCTaGTGCCCATCATATTATGGC +
Preference number: 4 (lower is better)
Translates to: SSLAFSRSRAESSTSGCYEGSAT*CPSYYG
Trigger: GCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTC...GTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGGAAAAGGCTAGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CACCTGGAGAAAGAGCTGCACATTCTAGCCTATGAGGGACCCACCCTTTTCACTACACACCTCCTGCCGTaGGCCATCGGGAAGCATGCA +
Preference number: 4 (lower is better)
Translates to: HLEKELHILAYEGPTLFTTHLLP*AIGKHA
Trigger: TGCATGCTTCCCGATGGCCCACGGCAGGAGGTGTGT...AGTGAAAAGGGTGGGTCCCTCATAGGCTAGAATGTGCAGCTCTTTCTCCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp GGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGAGACTTTAGGGCACAGACGTGGTaGGGAGAGTGGCCTGCATTT +
Preference number: 4 (lower is better)
Translates to: GTAPIRSWACVGSYTRDFRAQTW*GEWPAF
Trigger: AAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCT...AAAGTCTCTTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp ATGAGGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTCAGGGATCCCGTGCTaGCACCAGAGAGCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: MRDLCEHLRPYTSTHLLPSGIPC*HQRAVR
Trigger: TCTTACAGCTCTCTGGTGCCAGCACGGGATCCCTGA...CGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp GCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCAGCCAGGAGCTCCTaGCCAACTCTGAAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: APTFPFQTIHHHGWKAAPPARSS*PTLKKA
Trigger: TGCCTTTTTCAGAGTTGGCCAGGAGCTCCTGGCTGG...TGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGCTGCAGCTGGGCATGTGTTaGCTCTTACACAAGAGACTT +
Preference number: 4 (lower is better)
Translates to: HVCLAESLQGSRAGTRELQLGMC*LLHKRL
Trigger: AAGTCTCTTGTGTAAGAGCCAACACATGCCCAGCTG...CAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGCTGCGCTCTAATTTTGCCTaGATGGTGCTCTGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: HVCLAESLQGSRAGTRELRSNFA*MVLCQS
Trigger: TGACTGACAGAGCACCATCCAGGCAAAATTAGAGCG...CAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTCTGGATAACTCAGAGTaGCAGGGACACAGACGAGCC +
Preference number: 4 (lower is better)
Translates to: PTFPFQTIHHHGWKAAPPLDNSE*QGHRRA
Trigger: GGCTCGTCTGTGTCCCTGCCACTCTGAGTTATCCAG...AGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR CCA 90 bp GCAGTACACCTGGAGATCCCAGGGAGCCCCCTTCTTGAGAAAGAGTATCGTATGATCCATCACCATGGGTaGAAGGCAGCGCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: AVHLEIPGSPLLEKEYRMIHHHG*KAAPPA
Trigger: AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGAT...CATACGATACTCTTTCTCAAGAAGGGGGCTCCCTGGGATCTCCAGGTGTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR CAA 72 bp GCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTaGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: AGHRRGGESGLH*HSSFTRAQGVE
Trigger: CTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR TCA 90 bp AAGGCAGCGCCACCTGCTGCCCATCATATTATGGCTCACATACCCATAATTTCCCCGAGAGCAGGTCGTTaGGATCCTGCACCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: KAAPPAAHHIMAHIPIISPRAGR*DPAPRA
Trigger: AGCTCTCGGTGCAGGATCTCAACGACCTGCTCTCGG...GGAAATTATGGGTATGTGAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226004.8
CDS-3UTR TCA 90 bp ACCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCTCATGTCTGCCTGGCTaGGTCACTTCAGGGATCCCG +
Preference number: 4 (lower is better)
Translates to: TTNKGSIWTLRHVSCLPGSCLPG*VTSGIP
Trigger: CGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGA...GCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR TCA 90 bp GAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGGGCCATCGGGAAGACAAGGCCTTGCGAGTaGTCCTACCATGAATTCAGT +
Preference number: 4 (lower is better)
Translates to: EHLRPYTSTHLLPWAIGKTRPCE*SYHEFS
Trigger: ACTGAATTCATGGTAGGATCACTCGCAAGGCCTTGT...CTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp CCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATACGGGGTTTCAGGGGTaGAGGACTATCAAGAAATCC +
Preference number: 4 (lower is better)
Translates to: PNHPSPWVEGSATCCPSYTGFQG*RTIKKS
Trigger: GGATTTCTTGATAGTCCTTCACCCCTGAAACCCCGT...ATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp ACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTCGGTTAGCCCTTCAGTaGTTCCTGACACCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: TFPFQTIHHHGWKAAPPARLALQ*FLTPVL
Trigger: CAGAACTGGTGTCAGGAATCACTGAAGGGCTAACCG...AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR TCA 90 bp ACAGTGTGTTTCCTAAACATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCGTGAAAATCCAACTTaGGGCTTTCCAAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: TVCFLNMAARDTFAHGLPRENPT*GFPRLY
Trigger: GTACAGCCTTGGAAAGCCTCAAGTTGGATTTTCACG...GGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATGTTTAGGAAACACACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590342.1
CDS-3UTR GCA 90 bp ACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCGCATTGGTGTTGACGTaGATGAAGGACCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: TNIPFPNHPSPWVEGSATALVLT*MKDLPS
Trigger: TGAGGGCAGGTCCTTCATGCACGTCAACACCAATGC...GGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp ATGAGGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGGCAAGCTTCTTTATGTaGTCCCCAGGGTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: MRDLCEHLRPYTSTHLLPASFFM*SPGWGK
Trigger: CTTTCCCCACCCTGGGGAGCACATAAAGAAGCTTGC...CGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp TTCACTATCTGGAGAAGAAGACACATACTGGTTGTTCAGGGCTGCTGTGGTCACCTTCCACACACCTCCTaGCGTGGGCCATCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: FTIWRRRHILVVQGCCGHLPHTS*RGPSGS
Trigger: GCTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAG...GTGACCACAGCAGCCCTGAACAACCAGTATGTGTCTTCTTCTCCAGATAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp GTGGGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAAGAGTGGCCTGCATTTaGATAGTTCCTTTACTAGGG +
Preference number: 4 (lower is better)
Translates to: VGTVQGTDVVGRVACICIRVACI*IVPLLG
Trigger: CCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCT...TATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp GTGGGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAATTCAAATGCAGCCTTaGTGTGGGAATCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: VGTVQGTDVVGRVACICIIQMQP*CGNLHP
Trigger: TGGATGGAGATTCCCACAGCAAGGCTGCATTTGAAT...TATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp TTCCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAGGGTTCTCCAGGTTTaGCCACAAGGCCTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: FQEQSRKLYFGVLHPTWRRVLQV*PQGLFV
Trigger: CACAAAGAGGCCTTGTGGGCAAACCTGGAGAACCCT...TCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp GCTGTCCAGGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAACGAGTGGCTTGGGCTTaGCAACACTACAATTCAGGA +
Preference number: 4 (lower is better)
Translates to: AVQEQLPSAAGHVLALTQRVAWA*QHYNSG
Trigger: TCCTGAATTGTAGTGTTGGCAAGCCCAAGCCACTCG...TTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCCTGGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp CACCTGGAGAAAGAGCTGCACATTCTAGCCTATGAGGGACCCACCCTTTTCACTGCTGTAAGAGCCACCTaGAATGGGCAGGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: HLEKELHILAYEGPTLFTAVRAT*NGQGVC
Trigger: GCACACACCCTGCCCATTGCAGGTGGCTCTTACAGC...AGTGAAAAGGGTGGGTCCCTCATAGGCTAGAATGTGCAGCTCTTTCTCCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp GGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGAGACTTTACTTCAGGGATCCCGTaGTGGCACCAGAGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: GTAPIRSWACVGSYTRDFTSGIP*WHQRAV
Trigger: TACAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGT...AAAGTCTCTTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp GCTGTCCAGGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAATGGATTGAGGGTAAGTaGAGTACACCTGGAGATCCC +
Preference number: 4 (lower is better)
Translates to: AVQEQLPSAAGHVLALTQWIEGK*STPGDP
Trigger: GGGATCTCCAGGTGTACTGCACTTACCCTCAATCCA...TTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCCTGGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp GGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGAGACTTTCCCACCCTTTTCACTTaGTTCTCCGGGGCTGGATTG +
Preference number: 4 (lower is better)
Translates to: GTAPIRSWACVGSYTRDFPTLFT*FSGAGL
Trigger: CAATCCAGCCCCGGAGAAGCAAGTGAAAAGGGTGGG...AAAGTCTCTTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp GCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCAAGCTCTACTTCGGGGTaGTACATCCCACCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: APTFPFQTIHHHGWKAAPSSTSG*YIPPGE
Trigger: TTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCT...TGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp AAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTAGAAGGCAGCGCCACCTaGTGCCCATCATATTATGGC +
Preference number: 4 (lower is better)
Translates to: KPSITMGGRQRHLLPIILEGSAT*CPSYYG
Trigger: GCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTC...TAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR CCA 90 bp GCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTATGGAGCTGGACAACCCTGGGGCCCAGGACTGTGTTaGGACACACTTGTAGACAAG +
Preference number: 4 (lower is better)
Translates to: AANPKSCPAPPYGAGQPWGPGLC*DTLVDK
Trigger: CTTGTCTACAAGTGTGTCCCAACACAGTCCTGGGCC...CCAGGGTTGTCCAGCTCCATAAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CACAAAAGGCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCCAGGGTGGGGAAAGTaGCCCAGGACTGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: HKRHQHSLSKPSITMGGRPGWGK*PRTVLG
Trigger: TCCCAACACAGTCCTGGGCCACTTTCCCCACCCTGG...CCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp AGCGCCACCTGCTGCCCATCATATTATGGCTCACATACCCATAATTTCCTTGCGCCAGGGTGGGGAAAGTaGCCCAGGACTGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SATCCPSYYGSHTHNFLAPGWGK*PRTVLG
Trigger: TCCCAACACAGTCCTGGGCCACTTTCCCCACCCTGG...CGCAAGGAAATTATGGGTATGTGAGCCATAATATGATGGGCAGCAGGTGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp GGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGAGACTTTTCAGGGATCCCGTGCTaGCACCAGAGAGCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: GTAPIRSWACVGSYTRDFSGIPC*HQRAVR
Trigger: TCTTACAGCTCTCTGGTGCCAGCACGGGATCCCTGA...AAAGTCTCTTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp ACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGTTCAGGGCTGCTGTaGTCACAGAGAAAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: TNIPFPNHPSPWVEGSATCSGLL*SQRKAD
Trigger: GTCCGCTTTTCTCTGTGACCACAGCAGCCCTGAACA...GGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp ATGAGGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTTGCTTCTCCGGGGCTaGATTGAGGGTAAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: MRDLCEHLRPYTSTHLLPLLLRG*IEGKCS
Trigger: ACTGCACTTACCCTCAATCCAGCCCCGGAGAAGCAA...CGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp AGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAAGAGCTGCACTGGATAACTCAGAGTaGCAGGGACACAGACGAGCC +
Preference number: 4 (lower is better)
Translates to: RAESSTSGCYIPPGERAALDNSE*QGHRRA
Trigger: GGCTCGTCTGTGTCCCTGCCACTCTGAGTTATCCAG...TGCAGCTCTTTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGGTAGGTGGTGGTTTCTaGATAACTCAGAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: HSLSKPSITMGGRQRHLLVGGGF*ITQSGR
Trigger: CCTGCCACTCTGAGTTATCCAGAAACCACCACCTAC...CAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR CCA 90 bp CATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGCTGGTGCTGAATTCCAAGTaGGGATTATTAGAGACCCCT +
Preference number: 4 (lower is better)
Translates to: HVCLAESLQGSRAGTRELVLNSK*GLLETP
Trigger: AGGGGTCTCTAATAATCCCCACTTGGAATTCAGCAC...CAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CATACCCATAATTTCCTTGCGGTGCTGAATTCCAAGTGGGGATTATTAGAGACCGACGAGCACCCGGCCTaGGAGGTGGAGGTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: HTHNFLAVLNSKWGLLETDEHPA*EVEVAV
Trigger: CACCGCAACCTCCACCTCCCAGGCCGGGTGCTCGTC...GGTCTCTAATAATCCCCACTTGGAATTCAGCACCGCAAGGAAATTATGGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590753.1
CDS-3UTR TCA 90 bp GCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTATGGAGCTGGACAACCCTGGACGGGGTTTCAGGGGTaGAGGACTATCAAGAAATCC +
Preference number: 4 (lower is better)
Translates to: AANPKSCPAPPYGAGQPWTGFQG*RTIKKS
Trigger: GGATTTCTTGATAGTCCTTCACCCCTGAAACCCCGT...CCAGGGTTGTCCAGCTCCATAAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACTGGTTCTTTCCTGCTaGTTAGACATTCTTAGCGTT +
Preference number: 4 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLALVLSC*LDILSV
Trigger: AACGCTAAGAATGTCTAATCAGCAGGAAAGAACCAG...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590342.1
CDS-3UTR GCA 90 bp AGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAAGAGCTGCAGACCTTTCACTTCCCTaGTTGTCTTCTGGCCGCGTT +
Preference number: 4 (lower is better)
Translates to: RAESSTSGCYIPPGERAADLSLP*LSSGRV
Trigger: AACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC...TGCAGCTCTTTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp ACCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCACTTCAGGGATCCCGTaGTGGCACCAGAGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: TTNKGSIWTLRHVSCLPGTSGIP*WHQRAV
Trigger: TACAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGT...GCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp CATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGCTGCACCCACCAGAACAATaGCCTATATATATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: HVCLAESLQGSRAGTRELHPPEQ*PIYIWC
Trigger: GCACCAAATATATATAGGGCATTGTTCTGGTGGGTG...CAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp CACCTGGAGAAAGAGCTGCACATTCTAGCCTATGAGGGACCCACCCTTTTCACTGGCAGCGCCACCTGCTaGCCATCATATTATGGCTCA +
Preference number: 4 (lower is better)
Translates to: HLEKELHILAYEGPTLFTGSATC*PSYYGS
Trigger: TGAGCCATAATATGATGGGCAGCAGGTGGCGCTGCC...AGTGAAAAGGGTGGGTCCCTCATAGGCTAGAATGTGCAGCTCTTTCTCCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp GGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTTTGAGCTGGCAGAGCTaGGCCAGGAAGCCATCGTTG +
Preference number: 4 (lower is better)
Translates to: GLHLHSSFTRAQGVEVHTLSWQS*ARKPSL
Trigger: CAACGATGGCTTCCTGGCCCAGCTCTGCCAGCTCAA...AGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp ATGAGGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGGTGCTACATCCCACCTaGAGAAAGAGCTGCACATTC +
Preference number: 4 (lower is better)
Translates to: MRDLCEHLRPYTSTHLLPVLHPT*RKSCTF
Trigger: GAATGTGCAGCTCTTTCTCCAGGTGGGATGTAGCAC...CGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR CAA 72 bp AAGAATCCAGCTTCAGGGAGCAGCAAACCCAAAATCTaGCCCAGCTCCACCTTATGGAGCTGGACAACCCTG +
Preference number: 4 (lower is better)
Translates to: KNPASGSSKPKI*PSSTLWSWTTL
Trigger: CAGGGTTGTCCAGCTCCATAAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGCTCCCTGAAGCTGGATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp ATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTCAAGAGAGGATTCCCGAGAGCAGGTCGTTaGGATCCTGCACCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: IVPLLGLKVLRSTLKRGFPRAGR*DPAPRA
Trigger: AGCTCTCGGTGCAGGATCTCAACGACCTGCTCTCGG...GAATCCTCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590342.1
CDS-3UTR TCA 90 bp TTCACTATCTGGAGAAGAAGACACATACTGGTTGTTCAGGGCTGCTGTGGTCACCCATCCACTAATAACTaGCGGACACCCCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: FTIWRRRHILVVQGCCGHPSTNN*RTPPPQ
Trigger: CTGGGGTGGGGGTGTCCGTCAGTTATTAGTGGATGG...GTGACCACAGCAGCCCTGAACAACCAGTATGTGTCTTCTTCTCCAGATAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp ATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTCAAGAGAGGATTCTGCTGGGGGCATGGCTaGGGACCTTCTCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: IVPLLGLKVLRSTLKRGFCWGHG*GPSLCP
Trigger: TGGGCAAAGAGAAGGTCCTCAGCCATGCCCCCAGCA...GAATCCTCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp ACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTAGGGAGCCCCCTTCTTaGGAAAGAGTATCGTATGAA +
Preference number: 4 (lower is better)
Translates to: TFPFQTIHHHGWKAAPPAREPPS*ERVSYE
Trigger: TTCATACGATACTCTTTCTCAAGAAGGGGGCTCCCT...AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp GGTTTCTGGATAACTCAGAGTGGCAGGGACACAGACGAGCCTCTCGAGCAGAGGACTCCATCATTCTTTTaGGCCAAAGCCTGGTCAATG +
Preference number: 4 (lower is better)
Translates to: GFWITQSGRDTDEPLEQRTPSFF*AKAWSM
Trigger: CATTGACCAGGCTTTGGCTCAAAAGAATGATGGAGT...CCTCTGCTCGAGAGGCTCGTCTGTGTCCCTGCCACTCTGAGTTATCCAGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590753.1
CDS-3UTR GCA 90 bp GGGGAGAGTGGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGCATTGGTGTTGACGTaGATGAAGGACCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GESGLHLHSSFTRAQGVEALVLT*MKDLPS
Trigger: TGAGGGCAGGTCCTTCATGCACGTCAACACCAATGC...CTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp CTTGACTTACTTGCAAGGACTATCACGGTTAGCCCTTCAGTGATTCCTGACACCCCGATCTCACGGTTCTaGCTCACGATGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LDLLARTITVSPSVIPDTPISRF*LTMLRA
Trigger: TGCCCTGAGCATCGTGAGGCAGAACCGTGAGATCGG...GGTGTCAGGAATCACTGAAGGGCTAACCGTGATAGTCCTTGCAAGTAAGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR GCA 90 bp ACCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCGCAAGCTTCTTTATGTaGTCCCCAGGGTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: TTNKGSIWTLRHVSCLPGASFFM*SPGWGK
Trigger: CTTTCCCCACCCTGGGGAGCACATAAAGAAGCTTGC...GCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp TCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGGCTCATTCAAATGCAGCCTTaGTGTGGGAATCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: SITMGGRQRHLLPIILWLIQMQP*CGNLHP
Trigger: TGGATGGAGATTCCCACAGCAAGGCTGCATTTGAAT...GAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp GCAGTACACCTGGAGATCCCAGGGAGCCCCCTTCTTGAGAAAGAGTATCGTATGCGAGTGGCTTGGGCTTaGCAACACTACAATTCAGGA +
Preference number: 4 (lower is better)
Translates to: AVHLEIPGSPLLEKEYRMRVAWA*QHYNSG
Trigger: TCCTGAATTGTAGTGTTGGCAAGCCCAAGCCACTCG...CATACGATACTCTTTCTCAAGAAGGGGGCTCCCTGGGATCTCCAGGTGTACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp ACCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCCCCCACACACATCCATaGACACACGCTGTAATTGGC +
Preference number: 4 (lower is better)
Translates to: TTNKGSIWTLRHVSCLPGPHTHP*THAVIG
Trigger: GCCAATTACAGCGTGTGTGCATGGATGTGTGTGGGG...GCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp GGGGAGAGTGGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGCCATGTCTCATGTCTaGCTGGCTGAGTCACTTCAG +
Preference number: 4 (lower is better)
Translates to: GESGLHLHSSFTRAQGVEAMSHV*LAESLQ
Trigger: CTGAAGTGACTCAGCCAGGCAGACATGAGACATGGC...CTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp AGCATCTTAACTTGTGGCACAAAAGGCACCAACATTCCCTTTCCAAACCATCCATGCAGGGCACAGACGTaGTGGGGAGAGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SILTCGTKGTNIPFPNHPCRAQT*WGEWPA
Trigger: TGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCA...TGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTGTGCCACAAGTTAAGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGTACACATGTGAGGGCTaGTGCATTCCAATATCATCC +
Preference number: 4 (lower is better)
Translates to: HSLSKPSITMGGRQRHLLYTCEG*CIPISS
Trigger: GGATGATATTGGAATGCACCAGCCCTCACATGTGTA...CAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp AAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTAATGAATTCAGTCTTCTaGGAGCGTGACACACCCACC +
Preference number: 4 (lower is better)
Translates to: KPSITMGGRQRHLLPIILMNSVF*ERDTPT
Trigger: GGTGGGTGTGTCACGCTCCCAGAAGACTGAATTCAT...TAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp GGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGAGACTTTGTGCTACATCCCACCTaGAGAAAGAGCTGCACATTC +
Preference number: 4 (lower is better)
Translates to: GTAPIRSWACVGSYTRDFVLHPT*RKSCTF
Trigger: GAATGTGCAGCTCTTTCTCCAGGTGGGATGTAGCAC...AAAGTCTCTTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CATACCCATAATTTCCTTGCGGTGCTGAATTCCAAGTGGGGATTATTAGAGACCGCTGTGCCTGTCCCATaGGGTGACCACTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: HTHNFLAVLNSKWGLLETAVPVP*GDHCLV
Trigger: GACCAGGCAGTGGTCACCCCATGGGACAGGCACAGC...GGTCTCTAATAATCCCCACTTGGAATTCAGCACCGCAAGGAAATTATGGGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCCTCATTTGTAGGTaGTGGTTTCTGGATAACTCA +
Preference number: 4 (lower is better)
Translates to: HSLSKPSITMGGRQRHLLPLICR*WFLDNS
Trigger: TGAGTTATCCAGAAACCACCACCTACAAATGAGGGG...CAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR TCA 90 bp TCAGGGAGCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTATGGAGCTGGACAACAAGGCCTTGCGAGTaGTCCTACCATGAATTCAGT +
Preference number: 4 (lower is better)
Translates to: SGSSKPKILPSSTLWSWTTRPCE*SYHEFS
Trigger: ACTGAATTCATGGTAGGATCACTCGCAAGGCCTTGT...TGTCCAGCTCCATAAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGCTCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp ACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGATTTCCTTGCGGTGCTaGATTCCAAGTGGGGATTAT +
Preference number: 4 (lower is better)
Translates to: TIHHHGWKAAPPAAHHIMISLRC*IPSGDY
Trigger: ATAATCCCCACTTGGAATTCAGCACCGCAAGGAAAT...CATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR TCA 90 bp ACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCACTCCATCATTCTTTTaGGCCAAAGCCTGGTCAATG +
Preference number: 4 (lower is better)
Translates to: TNIPFPNHPSPWVEGSATTPSFF*AKAWSM
Trigger: CATTGACCAGGCTTTGGCTCAAAAGAATGATGGAGT...GGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590753.1
ENST00000590935.1
CDS-3UTR GCA 90 bp ATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTCAAGAGAGGATTCCCGATCTCACGGTTCTaGCTCACGATGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: IVPLLGLKVLRSTLKRGFPISRF*LTMLRA
Trigger: TGCCCTGAGCATCGTGAGGCAGAACCGTGAGATCGG...GAATCCTCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp AGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAAGAGCTGCAGTGGGGAGAGTGGCCTaGATTTGCATAGTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: RAESSTSGCYIPPGERAAVGRVA*ICIVPL
Trigger: TAAAGGAACTATGCAAATGCAGGCCACTCTCCCCAC...TGCAGCTCTTTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp ATGAGGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGATTCAAATGCAGCCTTaGTGTGGGAATCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: MRDLCEHLRPYTSTHLLPIQMQP*CGNLHP
Trigger: TGGATGGAGATTCCCACAGCAAGGCTGCATTTGAAT...CGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp CCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATAGGAAATCATTCAAATaGAGCCTTGCTGTGGGAATC +
Preference number: 4 (lower is better)
Translates to: PNHPSPWVEGSATCCPSYRKSFK*SLAVGI
Trigger: GATTCCCACAGCAAGGCTGCATTTGAATGATTTCCT...ATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp AGGAGCTCCTGGCCAACTCTGAAAAAGGCACATTCCCTACCTTGGCATATTAACAGTCTGTCATTGAGCTaGCAGAGCTGGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RSSWPTLKKAHSLPWHINSLSLS*QSWARK
Trigger: CTTCCTGGCCCAGCTCTGCCAGCTCAATGACAGACT...GTTAATATGCCAAGGTAGGGAATGTGCCTTTTTCAGAGTTGGCCAGGAGCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp ATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTCAAGAGAGGATTCAGGGCACAGACGTGGTaGGGAGAGTGGCCTGCATTT +
Preference number: 4 (lower is better)
Translates to: IVPLLGLKVLRSTLKRGFRAQTW*GEWPAF
Trigger: AAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCT...GAATCCTCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp TTCCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAATGCAGCCTTGCTGTaGGAATCTCCATCCACTAAT +
Preference number: 4 (lower is better)
Translates to: FQEQSRKLYFGVLHPTWRNAALL*ESPSTN
Trigger: ATTAGTGGATGGAGATTCCCACAGCAAGGCTGCATT...TCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGAATAAAGGATCCATTTaGACACTCCGCCATGTCTCA +
Preference number: 4 (lower is better)
Translates to: HSLSKPSITMGGRQRHLLNKGSI*TLRHVS
Trigger: TGAGACATGGCGGAGTGTCCAAATGGATCCTTTATT...CAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CATAATTTCCTTGCGGTGCTGAATTCCAAGTGGGGATTATTAGAGACCCCTCAGATCCATCACCATGGGTaGAAGGCAGCGCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: HNFLAVLNSKWGLLETPQIHHHG*KAAPPA
Trigger: AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGAT...CTGAGGGGTCTCTAATAATCCCCACTTGGAATTCAGCACCGCAAGGAAATTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR TCA 90 bp TTCACTATCTGGAGAAGAAGACACATACTGGTTGTTCAGGGCTGCTGTGGTCACAGTCTTCTGGGAGCGTaGCACACCCACCAGAACAAT +
Preference number: 4 (lower is better)
Translates to: FTIWRRRHILVVQGCCGHSLLGA*HTHQNN
Trigger: ATTGTTCTGGTGGGTGTGTCACGCTCCCAGAAGACT...GTGACCACAGCAGCCCTGAACAACCAGTATGTGTCTTCTTCTCCAGATAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp GGTAAGACTCCTTCACAAGGCCTTGCGAGTGATCCTACCATGAATTCAGTCTTCGCTCCTGGCCAACTCTaGAAAAGGCACATTCCCTAC +
Preference number: 4 (lower is better)
Translates to: GKTPSQGLASDPTMNSVFAPGQL*KRHIPY
Trigger: GTAGGGAATGTGCCTTTTTCAGAGTTGGCCAGGAGC...GAAGACTGAATTCATGGTAGGATCACTCGCAAGGCCTTGTGAAGGAGTCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp GGTAAGACTCCTTCACAAGGCCTTGCGAGTGATCCTACCATGAATTCAGTCTTCCCCCACACACATCCATaGACACACGCTGTAATTGGC +
Preference number: 4 (lower is better)
Translates to: GKTPSQGLASDPTMNSVFPHTHP*THAVIG
Trigger: GCCAATTACAGCGTGTGTGCATGGATGTGTGTGGGG...GAAGACTGAATTCATGGTAGGATCACTCGCAAGGCCTTGTGAAGGAGTCTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp ACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGACATGTGAGGGCTGGTaGATTCCAATATCATCCTTA +
Preference number: 4 (lower is better)
Translates to: TIHHHGWKAAPPAAHHIMTCEGW*IPISSL
Trigger: TAAGGATGATATTGGAATGCACCAGCCCTCACATGT...CATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp AGCTCCCTAGCCTTTTCCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACACATGTGAGGGCTGGTaGATTCCAATATCATCCTTA +
Preference number: 4 (lower is better)
Translates to: SSLAFSRSRAESSTSGCYTCEGW*IPISSL
Trigger: TAAGGATGATATTGGAATGCACCAGCCCTCACATGT...GTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGGAAAAGGCTAGGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp AGCATCTTAACTTGTGGCACAAAAGGCACCAACATTCCCTTTCCAAACCATCCACAGGCTGGGCAGGGCTaGTTCTGTGTGATCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SILTCGTKGTNIPFPNHPQAGQG*FCVIRD
Trigger: GTCTCTGATCACACAGAAGCAGCCCTGCCCAGCCTG...TGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTGTGCCACAAGTTAAGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CATACCCATAATTTCCTTGCGGTGCTGAATTCCAAGTGGGGATTATTAGAGACCCCAGGAAGCCATCGTTaGGGCCGATCTCACGGTTCT +
Preference number: 4 (lower is better)
Translates to: HTHNFLAVLNSKWGLLETPGSHR*GRSHGS
Trigger: AGAACCGTGAGATCGGCCCCAACGATGGCTTCCTGG...GGTCTCTAATAATCCCCACTTGGAATTCAGCACCGCAAGGAAATTATGGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR CCA 90 bp TTTTTCACTATCTGGAGAAGAAGACACATACTGGTTGTTCAGGGCTGCTGTGGTTTGAGCTGGCAGAGCTaGGCCAGGAAGCCATCGTTG +
Preference number: 4 (lower is better)
Translates to: FFTIWRRRHILVVQGCCGLSWQS*ARKPSL
Trigger: CAACGATGGCTTCCTGGCCCAGCTCTGCCAGCTCAA...ACCACAGCAGCCCTGAACAACCAGTATGTGTCTTCTTCTCCAGATAGTGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CATAATTTCCTTGCGGTGCTGAATTCCAAGTGGGGATTATTAGAGACCCCTCAGAGTCTGTCATTGAGCTaGCAGAGCTGGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HNFLAVLNSKWGLLETPQSLSLS*QSWARK
Trigger: CTTCCTGGCCCAGCTCTGCCAGCTCAATGACAGACT...CTGAGGGGTCTCTAATAATCCCCACTTGGAATTCAGCACCGCAAGGAAATTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR CCA 90 bp TCAGGGAGCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTATGGAGCTGGACAAATGCAGCCTTGCTGTaGGAATCTCCATCCACTAAT +
Preference number: 4 (lower is better)
Translates to: SGSSKPKILPSSTLWSWTNAALL*ESPSTN
Trigger: ATTAGTGGATGGAGATTCCCACAGCAAGGCTGCATT...TGTCCAGCTCCATAAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGCTCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp AAGGCAGCGCCACCTGCTGCCCATCATATTATGGCTCACATACCCATAATTTCCTGTCTCATGTCTGCCTaGCTGAGTCACTTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: KAAPPAAHHIMAHIPIISCLMSA*LSHFRD
Trigger: ATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACA...GGAAATTATGGGTATGTGAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp ATGAGGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGAATAAAGGATCCATTTaGACACTCCGCCATGTCTCA +
Preference number: 4 (lower is better)
Translates to: MRDLCEHLRPYTSTHLLPNKGSI*TLRHVS
Trigger: TGAGACATGGCGGAGTGTCCAAATGGATCCTTTATT...CGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CCA 90 bp GGGGAGAGTGGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGAAGAAGACACATACTaGTTGTTCAGGGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GESGLHLHSSFTRAQGVEEEDTY*LFRAAV
Trigger: CACAGCAGCCCTGAACAACCAGTATGTGTCTTCTTC...CTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAAGCCATTTCACTTAGGTaGGTTTATCTGGACACCTTT +
Preference number: 4 (lower is better)
Translates to: PGAEQKALLRGATSHLEKAISLR*VYLDTF
Trigger: AAAGGTGTCCAGATAAACCCACCTAAGTGAAATGGC...TTTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp GCGCCACCTGCTGCCCATCATATTATGGCTCACATACCCATAATTTCCTTGCGGACCCAGTTTAGAGGATaGCCATTTCACTTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: APPAAHHIMAHIPIISLRTQFRG*PFHLGG
Trigger: CCCACCTAAGTGAAATGGCCATCCTCTAAACTGGGT...CCGCAAGGAAATTATGGGTATGTGAGCCATAATATGATGGGCAGCAGGTGGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCTCGCTCTAATTTTGCCTaGATGGTGCTCTGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: PPIKDPFGHSAMSHVCLARSNFA*MVLCQS
Trigger: TGACTGACAGAGCACCATCCAGGCAAAATTAGAGCG...AGCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp GGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTGTAGGTGGTGGTTTCTaGATAACTCAGAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GLHLHSSFTRAQGVEVHTVGGGF*ITQSGR
Trigger: CCTGCCACTCTGAGTTATCCAGAAACCACCACCTAC...AGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CACAAAAGGCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGGTAGGTGGTGGTTTCTaGATAACTCAGAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: HKRHQHSLSKPSITMGGRVGGGF*ITQSGR
Trigger: CCTGCCACTCTGAGTTATCCAGAAACCACCACCTAC...CCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR CCA 90 bp TTCCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGACTCATTTGTAGGTGGTaGTTTCTGGATAACTCAGAG +
Preference number: 4 (lower is better)
Translates to: FQEQSRKLYFGVLHPTWRLICRW*FLDNSE
Trigger: CTCTGAGTTATCCAGAAACCACCACCTACAAATGAG...TCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp AAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTACTGACACCAGTTCTGTaGAAAAGAAAATTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: KPSITMGGRQRHLLPIILLTPVL*KRKFPA
Trigger: CGCAGGAAATTTTCTTTTTCACAGAACTGGTGTCAG...TAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR GCA 90 bp AGATTGAGAAGAAAACCATTTGGCGCTCTAATTTTGCCTGGATGGTGCTCTGTCCCCACCCTTTTCACTTaGTTCTCCGGGGCTGGATTG +
Preference number: 4 (lower is better)
Translates to: RLRRKPFGALILPGWCSVPTLFT*FSGAGL
Trigger: CAATCCAGCCCCGGAGAAGCAAGTGAAAAGGGTGGG...GACAGAGCACCATCCAGGCAAAATTAGAGCGCCAAATGGTTTTCTTCTCAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp AGATTGAGAAGAAAACCATTTGGCGCTCTAATTTTGCCTGGATGGTGCTCTGTCGAAGGCAGCGCCACCTaGTGCCCATCATATTATGGC +
Preference number: 4 (lower is better)
Translates to: RLRRKPFGALILPGWCSVEGSAT*CPSYYG
Trigger: GCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTC...GACAGAGCACCATCCAGGCAAAATTAGAGCGCCAAATGGTTTTCTTCTCAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp AGCGCCACCTGCTGCCCATCATATTATGGCTCACATACCCATAATTTCCTTGCGACCCAGTTTAGAGGATaGCCATTTCACTTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SATCCPSYYGSHTHNFLATQFRG*PFHLGG
Trigger: CCCACCTAAGTGAAATGGCCATCCTCTAAACTGGGT...CGCAAGGAAATTATGGGTATGTGAGCCATAATATGATGGGCAGCAGGTGGCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CAAAAGGCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCACAGCTGGGCATGTGTTaGCTCTTACACAAGAGACTT +
Preference number: 4 (lower is better)
Translates to: QKAPTFPFQTIHHHGWKAQLGMC*LLHKRL
Trigger: AAGTCTCTTGTGTAAGAGCCAACACATGCCCAGCTG...TGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
3UTR CAA 72 bp TGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTaGAGGTCCACACTCAAGAGAGGATTCGGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: CICIVPLLGLKV*RSTLKRGFGSW
Trigger: CCAACTCCCGAATCCTCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp GGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTAGAGTGGCCTGCATTTaGATAGTTCCTTTACTAGGG +
Preference number: 4 (lower is better)
Translates to: GLHLHSSFTRAQGVEVHTRVACI*IVPLLG
Trigger: CCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCT...AGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR GCA 90 bp AGATTGAGAAGAAAACCATTTGGCGCTCTAATTTTGCCTGGATGGTGCTCTGTCGACCTTTCACTTCCCTaGTTGTCTTCTGGCCGCGTT +
Preference number: 4 (lower is better)
Translates to: RLRRKPFGALILPGWCSVDLSLP*LSSGRV
Trigger: AACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC...GACAGAGCACCATCCAGGCAAAATTAGAGCGCCAAATGGTTTTCTTCTCAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp GTTAAGAGGCAACAAAAGTTAAGCTTCCAACGAATCTGTTCTCTCAACCGGAAACAGGCTGGGCAGGGCTaGTTCTGTGTGATCAGAGAC +
Preference number: 4 (lower is better)
Translates to: VKRQQKLSFQRICSLNRKQAGQG*FCVIRD
Trigger: GTCTCTGATCACACAGAAGCAGCCCTGCCCAGCCTG...TTTCCGGTTGAGAGAACAGATTCGTTGGAAGCTTAACTTTTGTTGCCTCTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226004.8
CDS-3UTR GCA 90 bp CCCAGAGTGACCCTGAAGATAAATAGCATCACAATCACTTTCCATAATAACAATCCATGGGGTGACCACTaGCTGGTCATGGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PRVTLKINSITITFHNNNPWGDH*LVMGGE
Trigger: CTCCCCTCCCATGACCAGGCAGTGGTCACCCCATGG...ATTGTTATTATGGAAAGTGATTGTGATGCTATTTATCTTCAGGGTCACTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp GTTAAGAGGCAACAAAAGTTAAGCTTCCAACGAATCTGTTCTCTCAACCGGAAACCAGGAAGCCATCGTTaGGGCCGATCTCACGGTTCT +
Preference number: 4 (lower is better)
Translates to: VKRQQKLSFQRICSLNRKPGSHR*GRSHGS
Trigger: AGAACCGTGAGATCGGCCCCAACGATGGCTTCCTGG...TTTCCGGTTGAGAGAACAGATTCGTTGGAAGCTTAACTTTTGTTGCCTCTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR CCA 90 bp AAGAGGCAACAAAAGTTAAGCTTCCAACGAATCTGTTCTCTCAACCGGAAATGTTTGAGCTGGCAGAGCTaGGCCAGGAAGCCATCGTTG +
Preference number: 4 (lower is better)
Translates to: KRQQKLSFQRICSLNRKCLSWQS*ARKPSL
Trigger: CAACGATGGCTTCCTGGCCCAGCTCTGCCAGCTCAA...ACATTTCCGGTTGAGAGAACAGATTCGTTGGAAGCTTAACTTTTGTTGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR CCA 90 bp ATTTCTTTCGTTTTAGGTAAGACTCCTTCACAAGGCCTTGCGAGTGATCCTACCTGTTCAGGGCTGCTGTaGTCACAGAGAAAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: ISFVLGKTPSQGLASDPTCSGLL*SQRKAD
Trigger: GTCCGCTTTTCTCTGTGACCACAGCAGCCCTGAACA...GGTAGGATCACTCGCAAGGCCTTGTGAAGGAGTCTTACCTAAAACGAAAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp ACCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCGCCATTTCACTTAGGTaGGTTTATCTGGACACCTTT +
Preference number: 4 (lower is better)
Translates to: TTNKGSIWTLRHVSCLPGAISLR*VYLDTF
Trigger: AAAGGTGTCCAGATAAACCCACCTAAGTGAAATGGC...GCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp AGATTGAGAAGAAAACCATTTGGCGCTCTAATTTTGCCTGGATGGTGCTCTGTCTTGCTTCTCCGGGGCTaGATTGAGGGTAAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RLRRKPFGALILPGWCSVLLLRG*IEGKCS
Trigger: ACTGCACTTACCCTCAATCCAGCCCCGGAGAAGCAA...GACAGAGCACCATCCAGGCAAAATTAGAGCGCCAAATGGTTTTCTTCTCAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CAAAAGGCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGTGCTGAATTCCAAGTaGGGATTATTAGAGACCCCT +
Preference number: 4 (lower is better)
Translates to: QKAPTFPFQTIHHHGWKAVLNSK*GLLETP
Trigger: AGGGGTCTCTAATAATCCCCACTTGGAATTCAGCAC...TGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR CCA 90 bp AGGCAACAAAAGTTAAGCTTCCAACGAATCTGTTCTCTCAACCGGAAATGTCTTAACCATCCATCACCATaGGTGGAAGGCAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: RQQKLSFQRICSLNRKCLNHPSP*VEGSAT
Trigger: GGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTT...AAGACATTTCCGGTTGAGAGAACAGATTCGTTGGAAGCTTAACTTTTGTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR TCA 90 bp CCCAGAGTGACCCTGAAGATAAATAGCATCACAATCACTTTCCATAATAACAATTGCTGGGGGCATGGCTaGGGACCTTCTCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: PRVTLKINSITITFHNNNCWGHG*GPSLCP
Trigger: TGGGCAAAGAGAAGGTCCTCAGCCATGCCCCCAGCA...ATTGTTATTATGGAAAGTGATTGTGATGCTATTTATCTTCAGGGTCACTCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp CTTGACTTACTTGCAAGGACTATCACGGTTAGCCCTTCAGTGATTCCTGACACCATTTCCTTGCGGTGCTaGATTCCAAGTGGGGATTAT +
Preference number: 4 (lower is better)
Translates to: LDLLARTITVSPSVIPDTISLRC*IPSGDY
Trigger: ATAATCCCCACTTGGAATTCAGCACCGCAAGGAAAT...GGTGTCAGGAATCACTGAAGGGCTAACCGTGATAGTCCTTGCAAGTAAGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR TCA 90 bp CTTGACTTACTTGCAAGGACTATCACGGTTAGCCCTTCAGTGATTCCTGACACCCCCTTCAGTGATTCCTaGCACCAGTTCTGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: LDLLARTITVSPSVIPDTPFSDS*HQFCEK
Trigger: TTTTTCACAGAACTGGTGTCAGGAATCACTGAAGGG...GGTGTCAGGAATCACTGAAGGGCTAACCGTGATAGTCCTTGCAAGTAAGTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR GCA 90 bp AAGAGGCAACAAAAGTTAAGCTTCCAACGAATCTGTTCTCTCAACCGGAAATGTAGGTCGTTGAGATCCTaGACCGAGAGCTCGAACGAG +
Preference number: 4 (lower is better)
Translates to: KRQQKLSFQRICSLNRKCRSLRS*TESSNE
Trigger: CTCGTTCGAGCTCTCGGTGCAGGATCTCAACGACCT...ACATTTCCGGTTGAGAGAACAGATTCGTTGGAAGCTTAACTTTTGTTGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226004.8
CDS-3UTR GCA 90 bp AGGAGCTCCTGGCCAACTCTGAAAAAGGCACATTCCCTACCTTGGCATATTAACAGAGTGGCCTGCATTTaGATAGTTCCTTTACTAGGG +
Preference number: 4 (lower is better)
Translates to: RSSWPTLKKAHSLPWHINRVACI*IVPLLG
Trigger: CCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCT...GTTAATATGCCAAGGTAGGGAATGTGCCTTTTTCAGAGTTGGCCAGGAGCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp CAAAAGGCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCACACCCACCAGAACAATaGCCTATATATATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: QKAPTFPFQTIHHHGWKAHPPEQ*PIYIWC
Trigger: GCACCAAATATATATAGGGCATTGTTCTGGTGGGTG...TGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CCCAGAGTGACCCTGAAGATAAATAGCATCACAATCACTTTCCATAATAACAATACACACCTCCTGCCGTaGGCCATCGGGAAGCATGCA +
Preference number: 4 (lower is better)
Translates to: PRVTLKINSITITFHNNNTHLLP*AIGKHA
Trigger: TGCATGCTTCCCGATGGCCCACGGCAGGAGGTGTGT...ATTGTTATTATGGAAAGTGATTGTGATGCTATTTATCTTCAGGGTCACTCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp AGGCATGCTAATATATTCTTTCTTGAGGCTCCTATTTCACATCTCAGAATGTTAGGGTGTGGAAGGCTGTaGGGACAGTGCAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: RHANIFFLEAPISHLRMLGCGRL*GQCRAQ
Trigger: CTGTGCCCTGCACTGTCCCCACAGCCTTCCACACCC...TAACATTCTGAGATGTGAAATAGGAGCCTCAAGAAAGAATATATTAGCATGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590342.1
CDS-3UTR CCA 90 bp AGGCAACAAAAGTTAAGCTTCCAACGAATCTGTTCTCTCAACCGGAAATGTCTTCCAGCCAGGAGCTCCTaGCCAACTCTGAAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: RQQKLSFQRICSLNRKCLPARSS*PTLKKA
Trigger: TGCCTTTTTCAGAGTTGGCCAGGAGCTCCTGGCTGG...AAGACATTTCCGGTTGAGAGAACAGATTCGTTGGAAGCTTAACTTTTGTTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226004.8
CDS-3UTR CCA 90 bp AGGAGCTCCTGGCCAACTCTGAAAAAGGCACATTCCCTACCTTGGCATATTAACCCCCTCATTTGTAGGTaGTGGTTTCTGGATAACTCA +
Preference number: 4 (lower is better)
Translates to: RSSWPTLKKAHSLPWHINPLICR*WFLDNS
Trigger: TGAGTTATCCAGAAACCACCACCTACAAATGAGGGG...GTTAATATGCCAAGGTAGGGAATGTGCCTTTTTCAGAGTTGGCCAGGAGCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp GGTAAGACTCCTTCACAAGGCCTTGCGAGTGATCCTACCATGAATTCAGTCTTCGTGCTGAATTCCAAGTaGGGATTATTAGAGACCCCT +
Preference number: 4 (lower is better)
Translates to: GKTPSQGLASDPTMNSVFVLNSK*GLLETP
Trigger: AGGGGTCTCTAATAATCCCCACTTGGAATTCAGCAC...GAAGACTGAATTCATGGTAGGATCACTCGCAAGGCCTTGTGAAGGAGTCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp ATTTCTTTCGTTTTAGGTAAGACTCCTTCACAAGGCCTTGCGAGTGATCCTACCAGGGAGCCCCCTTCTTaGGAAAGAGTATCGTATGAA +
Preference number: 4 (lower is better)
Translates to: ISFVLGKTPSQGLASDPTREPPS*ERVSYE
Trigger: TTCATACGATACTCTTTCTCAAGAAGGGGGCTCCCT...GGTAGGATCACTCGCAAGGCCTTGTGAAGGAGTCTTACCTAAAACGAAAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR GCA 90 bp CCAACGAATCTGTTCTCTCAACCGGAAATGTCTTCTATTTCCAATCAGGATAAAGGCAGCGCCACCTGCTaGCCATCATATTATGGCTCA +
Preference number: 4 (lower is better)
Translates to: PTNLFSQPEMSSISNQDKGSATC*PSYYGS
Trigger: TGAGCCATAATATGATGGGCAGCAGGTGGCGCTGCC...TTTATCCTGATTGGAAATAGAAGACATTTCCGGTTGAGAGAACAGATTCGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR CCA 90 bp AGGCAACAAAAGTTAAGCTTCCAACGAATCTGTTCTCTCAACCGGAAATGTCTTGGCCCAGGACTGTGTTaGGACACACTTGTAGACAAG +
Preference number: 4 (lower is better)
Translates to: RQQKLSFQRICSLNRKCLGPGLC*DTLVDK
Trigger: CTTGTCTACAAGTGTGTCCCAACACAGTCCTGGGCC...AAGACATTTCCGGTTGAGAGAACAGATTCGTTGGAAGCTTAACTTTTGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226004.8
CDS-3UTR CCA 90 bp GGGGAGAGTGGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGACCTTTTTCACTATCTaGAGAAGAAGACACATACTG +
Preference number: 4 (lower is better)
Translates to: GESGLHLHSSFTRAQGVETFFTI*RRRHIL
Trigger: CAGTATGTGTCTTCTTCTCCAGATAGTGAAAAAGGT...CTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp GGGGAGAGTGGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGTTAGGTGGGTTTATCTaGACACCTTTTTCACTATCT +
Preference number: 4 (lower is better)
Translates to: GESGLHLHSSFTRAQGVELGGFI*TPFSLS
Trigger: AGATAGTGAAAAAGGTGTCCAGATAAACCCACCTAA...CTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CTAAAATTTGGTGGCGTTAAGAGGCAACAAAAGTTAAGCTTCCAACGAATCTGTCTGGATAACTCAGAGTaGCAGGGACACAGACGAGCC +
Preference number: 4 (lower is better)
Translates to: LKFGGVKRQQKLSFQRICLDNSE*QGHRRA
Trigger: GGCTCGTCTGTGTCCCTGCCACTCTGAGTTATCCAG...ACAGATTCGTTGGAAGCTTAACTTTTGTTGCCTCTTAACGCCACCAAATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR TCA 90 bp AGGCATGCTAATATATTCTTTCTTGAGGCTCCTATTTCACATCTCAGAATGTTATCGGACCTCAAGACGTaGGAGGGCTGCCTATGCACA +
Preference number: 4 (lower is better)
Translates to: RHANIFFLEAPISHLRMLSDLKT*EGCLCT
Trigger: TGTGCATAGGCAGCCCTCTCACGTCTTGAGGTCCGA...TAACATTCTGAGATGTGAAATAGGAGCCTCAAGAAAGAATATATTAGCATGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590342.1
CDS-3UTR GCA 90 bp CATAATCAAATTACCCTAAAATTTGGTGGCGTTAAGAGGCAACAAAAGTTAAGCCAGAGGTGGTGGGGGTaGCCTAGGGTTTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: HNQITLKFGGVKRQQKLSQRWWG*PRVSTS
Trigger: GGAAGTTGAAACCCTAGGGCACCCCCACCACCTCTG...GCTTAACTTTTGTTGCCTCTTAACGCCACCAAATTTTAGGGTAATTTGATTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR GCA 90 bp CCCAGAGTGACCCTGAAGATAAATAGCATCACAATCACTTTCCATAATAACAATACTTCAGGGATCCCGTaGTGGCACCAGAGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: PRVTLKINSITITFHNNNTSGIP*WHQRAV
Trigger: TACAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGT...ATTGTTATTATGGAAAGTGATTGTGATGCTATTTATCTTCAGGGTCACTCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp AAGAGGCAACAAAAGTTAAGCTTCCAACGAATCTGTTCTCTCAACCGGAAATGTCAGAGCAGCAGATTCTaGACTCAAGGCTTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: KRQQKLSFQRICSLNRKCQSSRF*TQGFQR
Trigger: TCTTTGGAAGCCTTGAGTTCAGAATCTGCTGCTCTG...ACATTTCCGGTTGAGAGAACAGATTCGTTGGAAGCTTAACTTTTGTTGCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226004.8
CDS-3UTR GCA 90 bp AGGCATGCTAATATATTCTTTCTTGAGGCTCCTATTTCACATCTCAGAATGTTAAGGTCGTTGAGATCCTaGACCGAGAGCTCGAACGAG +
Preference number: 4 (lower is better)
Translates to: RHANIFFLEAPISHLRMLRSLRS*TESSNE
Trigger: CTCGTTCGAGCTCTCGGTGCAGGATCTCAACGACCT...TAACATTCTGAGATGTGAAATAGGAGCCTCAAGAAAGAATATATTAGCATGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590342.1
CDS-3UTR GCA 90 bp ATTTCTTTCGTTTTAGGTAAGACTCCTTCACAAGGCCTTGCGAGTGATCCTACCAGGAAATCATTCAAATaGAGCCTTGCTGTGGGAATC +
Preference number: 4 (lower is better)
Translates to: ISFVLGKTPSQGLASDPTRKSFK*SLAVGI
Trigger: GATTCCCACAGCAAGGCTGCATTTGAATGATTTCCT...GGTAGGATCACTCGCAAGGCCTTGTGAAGGAGTCTTACCTAAAACGAAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp AGGCATGCTAATATATTCTTTCTTGAGGCTCCTATTTCACATCTCAGAATGTTAAGTCTGTCATTGAGCTaGCAGAGCTGGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RHANIFFLEAPISHLRMLSLSLS*QSWARK
Trigger: CTTCCTGGCCCAGCTCTGCCAGCTCAATGACAGACT...TAACATTCTGAGATGTGAAATAGGAGCCTCAAGAAAGAATATATTAGCATGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590342.1
CDS-3UTR CCA 90 bp ATTTCTTTCGTTTTAGGTAAGACTCCTTCACAAGGCCTTGCGAGTGATCCTACCAATAAAGGATCCATTTaGACACTCCGCCATGTCTCA +
Preference number: 4 (lower is better)
Translates to: ISFVLGKTPSQGLASDPTNKGSI*TLRHVS
Trigger: TGAGACATGGCGGAGTGTCCAAATGGATCCTTTATT...GGTAGGATCACTCGCAAGGCCTTGTGAAGGAGTCTTACCTAAAACGAAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CATACCCATAATTTCCTTGCGGTGCTGAATTCCAAGTGGGGATTATTAGAGACCCTCATTTGTAGGTGGTaGTTTCTGGATAACTCAGAG +
Preference number: 4 (lower is better)
Translates to: HTHNFLAVLNSKWGLLETLICRW*FLDNSE
Trigger: CTCTGAGTTATCCAGAAACCACCACCTACAAATGAG...GGTCTCTAATAATCCCCACTTGGAATTCAGCACCGCAAGGAAATTATGGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
3UTR CAA 72 bp TTAAGATTGAGAAGAAAACCATTTGGCGCTCTAATTTaGCCTGGATGGTGCTCTGTCAGTCAAAGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LRLRRKPFGALI*PGWCSVSQRKG
Trigger: TCCCTTTCTTTGACTGACAGAGCACCATCCAGGCAAAATTAGAGCGCCAAATGGTTTTCTTCTCAATCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp CCAACGAATCTGTTCTCTCAACCGGAAATGTCTTCTATTTCCAATCAGGATAAACCCTTCAGTGATTCCTaGCACCAGTTCTGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: PTNLFSQPEMSSISNQDKPFSDS*HQFCEK
Trigger: TTTTTCACAGAACTGGTGTCAGGAATCACTGAAGGG...TTTATCCTGATTGGAAATAGAAGACATTTCCGGTTGAGAGAACAGATTCGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR TCA 90 bp CATACCCATAATTTCCTTGCGGTGCTGAATTCCAAGTGGGGATTATTAGAGACCATCAGGATAAAACCTTaGCTTACTTGCAAGGACTAT +
Preference number: 4 (lower is better)
Translates to: HTHNFLAVLNSKWGLLETIRIKP*LTCKDY
Trigger: ATAGTCCTTGCAAGTAAGTCAAGGTTTTATCCTGAT...GGTCTCTAATAATCCCCACTTGGAATTCAGCACCGCAAGGAAATTATGGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR CCA 90 bp ATTTCTTTCGTTTTAGGTAAGACTCCTTCACAAGGCCTTGCGAGTGATCCTACCACCTTTTTCACTATCTaGAGAAGAAGACACATACTG +
Preference number: 4 (lower is better)
Translates to: ISFVLGKTPSQGLASDPTTFFTI*RRRHIL
Trigger: CAGTATGTGTCTTCTTCTCCAGATAGTGAAAAAGGT...GGTAGGATCACTCGCAAGGCCTTGTGAAGGAGTCTTACCTAAAACGAAAGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CATACCCATAATTTCCTTGCGGTGCTGAATTCCAAGTGGGGATTATTAGAGACCTTAGGTGGGTTTATCTaGACACCTTTTTCACTATCT +
Preference number: 4 (lower is better)
Translates to: HTHNFLAVLNSKWGLLETLGGFI*TPFSLS
Trigger: AGATAGTGAAAAAGGTGTCCAGATAAACCCACCTAA...GGTCTCTAATAATCCCCACTTGGAATTCAGCACCGCAAGGAAATTATGGGTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CCA 90 bp CCAACGAATCTGTTCTCTCAACCGGAAATGTCTTCTATTTCCAATCAGGATAAACCCCTCATTTGTAGGTaGTGGTTTCTGGATAACTCA +
Preference number: 4 (lower is better)
Translates to: PTNLFSQPEMSSISNQDKPLICR*WFLDNS
Trigger: TGAGTTATCCAGAAACCACCACCTACAAATGAGGGG...TTTATCCTGATTGGAAATAGAAGACATTTCCGGTTGAGAGAACAGATTCGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR TCA 90 bp CTAAAATTTGGTGGCGTTAAGAGGCAACAAAAGTTAAGCTTCCAACGAATCTGTCTGACACCAGTTCTGTaGAAAAGAAAATTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: LKFGGVKRQQKLSFQRICLTPVL*KRKFPA
Trigger: CGCAGGAAATTTTCTTTTTCACAGAACTGGTGTCAG...ACAGATTCGTTGGAAGCTTAACTTTTGTTGCCTCTTAACGCCACCAAATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR CCA 90 bp CCCAGAGTGACCCTGAAGATAAATAGCATCACAATCACTTTCCATAATAACAATTACACATGTGAGGGCTaGTGCATTCCAATATCATCC +
Preference number: 4 (lower is better)
Translates to: PRVTLKINSITITFHNNNYTCEG*CIPISS
Trigger: GGATGATATTGGAATGCACCAGCCCTCACATGTGTA...ATTGTTATTATGGAAAGTGATTGTGATGCTATTTATCTTCAGGGTCACTCTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR TCA 90 bp AGGCAACAAAAGTTAAGCTTCCAACGAATCTGTTCTCTCAACCGGAAATGTCTTATCAGGATAAAACCTTaGCTTACTTGCAAGGACTAT +
Preference number: 4 (lower is better)
Translates to: RQQKLSFQRICSLNRKCLIRIKP*LTCKDY
Trigger: ATAGTCCTTGCAAGTAAGTCAAGGTTTTATCCTGAT...AAGACATTTCCGGTTGAGAGAACAGATTCGTTGGAAGCTTAACTTTTGTTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR CAA 90 bp CATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGACCTCTCGAGCACAGCTCGGGACACCTTaGCCCACGGCCTCCCCCACG +
Preference number: 5 (lower is better)
Translates to: HGSSGHLCPRPPPRTSRAQLGTP*PTASPT
Trigger: CGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTG...TGCTCGAGAGGTCCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp TTCCAGGAGCAGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGACAGCTCGGGACACCTTaGCCCACGGCCTCCCCCACG +
Preference number: 5 (lower is better)
Translates to: FQEQSRKLYFGVLHPTWRQLGTP*PTASPT
Trigger: CGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTG...TCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCTGCTCCTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp GTGTTTCCTAAACATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGGAGAGGATTCGGGAGTaGGGGAAGGGAGGTCATGAG +
Preference number: 5 (lower is better)
Translates to: VFPKHGSSGHLCPRPPPRERIRE*GKGGHE
Trigger: CTCATGACCTCCCTTCCCCAACTCCCGAATCCTCTC...CCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATGTTTAGGAAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp TGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGTCCGAGAGCAGGTCGTaGAGATCCTGCACCGAGAGC +
Preference number: 5 (lower is better)
Translates to: CLMSAWLSHFRDPVLAPESESRS*RSCTES
Trigger: GCTCTCGGTGCAGGATCTCAACGACCTGCTCTCGGA...CTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590342.1
CDS-3UTR CAA 90 bp TCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGGCTCGCCAGGAAGCCATCGTaGGGGCCGATCTCACGGTTC +
Preference number: 5 (lower is better)
Translates to: SITMGGRQRHLLPIILWLARKPS*GPISRF
Trigger: GAACCGTGAGATCGGCCCCAACGATGGCTTCCTGGC...GAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR CAA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCATTGGCTAGTCTGTCATaGAGCTGGCAGAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLALASLS*SWQSWA
Trigger: GGCCCAGCTCTGCCAGCTCAATGACAGACTAGCCAA...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp GTGTTTCCTAAACATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGGCCCACAAGGCCTCTTaGTGTAGGGACCATTCATCC +
Preference number: 5 (lower is better)
Translates to: VFPKHGSSGHLCPRPPPRAHKAS*CRDHSS
Trigger: GGATGAATGGTCCCTACACAAAGAGGCCTTGTGGGC...CCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATGTTTAGGAAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp ATGAGGGACCTCTGTGAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGGCCAGGAAGCCATCGTaGGGGCCGATCTCACGGTTC +
Preference number: 5 (lower is better)
Translates to: MRDLCEHLRPYTSTHLLPARKPS*GPISRF
Trigger: GAACCGTGAGATCGGCCCCAACGATGGCTTCCTGGC...CGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTCACAGAGGTCCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp TGGTTTCTGGATAACTCAGAGTGGCAGGGACACAGACGAGCCTCTCGAGCAGAGGCCAGGAAGCCATCGTaGGGGCCGATCTCACGGTTC +
Preference number: 5 (lower is better)
Translates to: WFLDNSEWQGHRRASRAEARKPS*GPISRF
Trigger: GAACCGTGAGATCGGCCCCAACGATGGCTTCCTGGC...CTCTGCTCGAGAGGCTCGTCTGTGTCCCTGCCACTCTGAGTTATCCAGAAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590753.1
CDS-3UTR CAA 90 bp GTGTTTCCTAAACATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGTGGCCCAGGACTGTGTaGGGACACACTTGTAGACAA +
Preference number: 5 (lower is better)
Translates to: VFPKHGSSGHLCPRPPPRWPRTV*GHTCRQ
Trigger: TTGTCTACAAGTGTGTCCCAACACAGTCCTGGGCCA...CCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATGTTTAGGAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp GTGTTTCCTAAACATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGCTAGGGCTCAAGGTGTaGAGGTCCACACTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: VFPKHGSSGHLCPRPPPRLGLKV*RSTLKR
Trigger: TCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAG...CCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATGTTTAGGAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp GTGGGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATACTGAGGACCTTCTCTTaGCCCAGAGTGACCCTGAAG +
Preference number: 5 (lower is better)
Translates to: VGTVQGTDVVGRVACICILRTFS*PRVTLK
Trigger: CTTCAGGGTCACTCTGGGCAAAGAGAAGGTCCTCAG...TATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp CATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGGCCAAGATCGCGCCATaGCTCTTCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: HSLSKPSITMGGRQRHLLAKIAP*LFSLGN
Trigger: GTTGCCCAGGCTGAAGAGCAATGGCGCGATCTTGGC...CAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590753.1
ENST00000590935.1
CDS-3UTR CAA 90 bp CATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCCACGGACCTCTCGAGCAGGAGGAGGGTTAGTTTaGAGTTTTCAACATGCCATC +
Preference number: 5 (lower is better)
Translates to: HGSSGHLCPRPPPRTSRAGGGLV*SFQHAI
Trigger: GATGGCATGTTGAAAACTCAAAACTAACCCTCCTCC...TGCTCGAGAGGTCCGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590342.1
CDS-3UTR CAA 90 bp TTCACTTGCTTCTCCGGGGCTGGATTGAGGGTAAGTGCAGTACACCTGGAGATCGCCAGGAAGCCATCGTaGGGGCCGATCTCACGGTTC +
Preference number: 5 (lower is better)
Translates to: FTCFSGAGLRVSAVHLEIARKPS*GPISRF
Trigger: GAACCGTGAGATCGGCCCCAACGATGGCTTCCTGGC...GATCTCCAGGTGTACTGCACTTACCCTCAATCCAGCCCCGGAGAAGCAAGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp AGGAGCTCCTGGCCAACTCTGAAAAAGGCACATTCCCTACCTTGGCATATTAACCAGCTCGGGACACCTTaGCCCACGGCCTCCCCCACG +
Preference number: 5 (lower is better)
Translates to: RSSWPTLKKAHSLPWHINQLGTP*PTASPT
Trigger: CGTGGGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTG...GTTAATATGCCAAGGTAGGGAATGTGCCTTTTTCAGAGTTGGCCAGGAGCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp CCGCCATGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACTTTCACTTCCCTGCTaGTCTTCTGGCCGCGTTTCT +
Preference number: 5 (lower is better)
Translates to: PPCLMSAWLSHFRDPVLALSLPC*SSGRVS
Trigger: AGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAG...TGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACATGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp GTGGGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAGAAGACACATACTGGTaGTTCAGGGCTGCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: VGTVQGTDVVGRVACICIEDTYW*FRAAVV
Trigger: GACCACAGCAGCCCTGAACAACCAGTATGTGTCTTC...TATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp AGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAAGAGCTGCATCCGAGAGCAGGTCGTaGAGATCCTGCACCGAGAGC +
Preference number: 5 (lower is better)
Translates to: RAESSTSGCYIPPGERAASESRS*RSCTES
Trigger: GCTCTCGGTGCAGGATCTCAACGACCTGCTCTCGGA...TGCAGCTCTTTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226004.8
CDS-3UTR CAA 90 bp ACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTATGCTCAGGGCAGACTaGACGTCCATCTTCTGCCGC +
Preference number: 5 (lower is better)
Translates to: TFPFQTIHHHGWKAAPPAMLRAD*TSIFCR
Trigger: GCGGCAGAAGATGGACGTCAAGTCTGCCCTGAGCAT...AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR CAA 90 bp ACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCATGCTCAGGGCAGACTaGACGTCCATCTTCTGCCGC +
Preference number: 5 (lower is better)
Translates to: TNIPFPNHPSPWVEGSATMLRAD*TSIFCR
Trigger: GCGGCAGAAGATGGACGTCAAGTCTGCCCTGAGCAT...GGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR CAA 90 bp TGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGTGGCCCAGGACTGTGTaGGGACACACTTGTAGACAA +
Preference number: 5 (lower is better)
Translates to: CLMSAWLSHFRDPVLAPEWPRTV*GHTCRQ
Trigger: TTGTCTACAAGTGTGTCCCAACACAGTCCTGGGCCA...CTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp GCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCAGAGAGGATTCGGGAGTaGGGGAAGGGAGGTCATGAG +
Preference number: 5 (lower is better)
Translates to: APTFPFQTIHHHGWKAAPERIRE*GKGGHE
Trigger: CTCATGACCTCCCTTCCCCAACTCCCGAATCCTCTC...TGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp GACCTTTCACTTCCCTGCTTGTCTTCTGGCCGCGTTTCTGAGAGGCACGCCCCCCATTCAAATGCAGCCTaGCTGTGGGAATCTCCATCC +
Preference number: 5 (lower is better)
Translates to: DLSLPCLSSGRVSERHAPHSNAA*LWESPS
Trigger: GGATGGAGATTCCCACAGCAAGGCTGCATTTGAATG...GGGGGCGTGCCTCTCAGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp CATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGAGCTGCATTCAAATGCAGCCTaGCTGTGGGAATCTCCATCC +
Preference number: 5 (lower is better)
Translates to: HVCLAESLQGSRAGTRELHSNAA*LWESPS
Trigger: GGATGGAGATTCCCACAGCAAGGCTGCATTTGAATG...CAGCTCTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp GAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGGGCCATCGGGAAGACGAGTGGCTTGGGCTaGCCAACACTACAATTCAGG +
Preference number: 5 (lower is better)
Translates to: EHLRPYTSTHLLPWAIGKTSGLG*PTLQFR
Trigger: CCTGAATTGTAGTGTTGGCAAGCCCAAGCCACTCGT...CTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp GTGGGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAAGCAAACCCAAAATCTaGCCCAGCTCCACCTTATGG +
Preference number: 5 (lower is better)
Translates to: VGTVQGTDVVGRVACICISKPKI*PSSTLW
Trigger: CCATAAGGTGGAGCTGGGCAAGATTTTGGGTTTGCT...TATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp CACTTGCTTCTCCGGGGCTGGATTGAGGGTAAGTGCAGTACACCTGGAGATCCCACCCACCCTTTTCACTaGCTTCTCCGGGGCTGGATT +
Preference number: 5 (lower is better)
Translates to: HLLLRGWIEGKCSTPGDPTHPFH*LLRGWI
Trigger: AATCCAGCCCCGGAGAAGCAAGTGAAAAGGGTGGGT...GGGATCTCCAGGTGTACTGCACTTACCCTCAATCCAGCCCCGGAGAAGCAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp GAGCATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGGGCCATCGGGAAGAAGTTGGCATTGGTGTaGACGTGCATGAAGGACCTG +
Preference number: 5 (lower is better)
Translates to: EHLRPYTSTHLLPWAIGKKLALV*TCMKDL
Trigger: CAGGTCCTTCATGCACGTCAACACCAATGCCAACTT...CTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp GGGACAGTGCAGGGCACAGACGTGGTGGGGAGAGTGGCCTGCATTTGCATAGTTAAGTTGGCATTGGTGTaGACGTGCATGAAGGACCTG +
Preference number: 5 (lower is better)
Translates to: GTVQGTDVVGRVACICIVKLALV*TCMKDL
Trigger: CAGGTCCTTCATGCACGTCAACACCAATGCCAACTT...AACTATGCAAATGCAGGCCACTCTCCCCACCACGTCTGTGCCCTGCACTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp CTGTCCAGGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAGCACCCGGCCATTCTTTaGAGCCAAAGCCTGGTCAAT +
Preference number: 5 (lower is better)
Translates to: LSRNSSHPQLGMCWLLHKHPAIL*SQSLVN
Trigger: ATTGACCAGGCTTTGGCTCAAAAGAATGGCCGGGTG...CTTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCCTGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226004.8
CDS-3UTR CAA 90 bp TTCACTTGCTTCTCCGGGGCTGGATTGAGGGTAAGTGCAGTACACCTGGAGATCATGCTCAGGGCAGACTaGACGTCCATCTTCTGCCGC +
Preference number: 5 (lower is better)
Translates to: FTCFSGAGLRVSAVHLEIMLRAD*TSIFCR
Trigger: GCGGCAGAAGATGGACGTCAAGTCTGCCCTGAGCAT...GATCTCCAGGTGTACTGCACTTACCCTCAATCCAGCCCCGGAGAAGCAAGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp GACCTTTCACTTCCCTGCTTGTCTTCTGGCCGCGTTTCTGAGAGGCACGCCCCCGAGAGTGGCCTGCATTaGCATAGTTCCTTTACTAGG +
Preference number: 5 (lower is better)
Translates to: DLSLPCLSSGRVSERHAPESGLH*HSSFTR
Trigger: CCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTC...GGGGGCGTGCCTCTCAGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp ATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGGGCCATCGGGAAGCATGACGAGTGGCTTGGGCTaGCCAACACTACAATTCAGG +
Preference number: 5 (lower is better)
Translates to: ILGLTLPHTSCRGPSGSMTSGLG*PTLQFR
Trigger: CCTGAATTGTAGTGTTGGCAAGCCCAAGCCACTCGT...CATGCTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp TGTCTCATGTCTGCCTGGCTGAGTCACTTCAGGGATCCCGTGCTGGCACCAGAGTTTGGCGCTCTAATTTaGCCTGGATGGTGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: CLMSAWLSHFRDPVLAPEFGALI*PGWCSV
Trigger: GACAGAGCACCATCCAGGCAAAATTAGAGCGCCAAA...CTCTGGTGCCAGCACGGGATCCCTGAAGTGACTCAGCCAGGCAGACATGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS CCA 90 bp TGGACCGTTCTAGAATCTCCTGTAAATCAAATCACATCTGGAAGGTaGGGGCCTGGAAATCCCGGCCCAGCTCCCCGGACTCGCTCATTT +
Preference number: 5 (lower is better)
Translates to: WTVLESPVNQITSGR*GPGNPGPAPRTRSF
Trigger: AAATGAGCGAGTCCGGGGAGCTGGGCCGGGATTTCCAGGCCCCCACCTTCCAGATGTGATTTGATTTACAGGAGATTCTAGAACGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591618.1
CDS CCA 90 bp TTATCACTGGACCGTTCTAGAATCTCCTGTAAATCAAATCACATCTaGAAGGTGGGGGCCTGGAAATCCCGGCCCAGCTCCCCGGACTCG +
Preference number: 5 (lower is better)
Translates to: LSLDRSRISCKSNHI*KVGAWKSRPSSPDS
Trigger: CGAGTCCGGGGAGCTGGGCCGGGATTTCCAGGCCCCCACCTTCCAGATGTGATTTGATTTACAGGAGATTCTAGAACGGTCCAGTGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591618.1
CDS-3UTR CAA 90 bp CCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCTATGCTCAGGGCAGACTaGACGTCCATCTTCTGCCGC +
Preference number: 5 (lower is better)
Translates to: PPIKDPFGHSAMSHVCLAMLRAD*TSIFCR
Trigger: GCGGCAGAAGATGGACGTCAAGTCTGCCCTGAGCAT...AGCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp CACCTGGAGAAAGAGCTGCACATTCTAGCCTATGAGGGACCCACCCTTTTCACTTTGGCTAGTCTGTCATaGAGCTGGCAGAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: HLEKELHILAYEGPTLFTLASLS*SWQSWA
Trigger: GGCCCAGCTCTGCCAGCTCAATGACAGACTAGCCAA...AGTGAAAAGGGTGGGTCCCTCATAGGCTAGAATGTGCAGCTCTTTCTCCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp ACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTGCCCATCATATTATGTGGCCCAGGACTGTGTaGGGACACACTTGTAGACAA +
Preference number: 5 (lower is better)
Translates to: TIHHHGWKAAPPAAHHIMWPRTV*GHTCRQ
Trigger: TTGTCTACAAGTGTGTCCCAACACAGTCCTGGGCCA...CATAATATGATGGGCAGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp AGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAAGAGCTGCATTCTCCGGGGCTGGATaGAGGGTAAGTGCAGTACAC +
Preference number: 5 (lower is better)
Translates to: RAESSTSGCYIPPGERAAFSGAG*RVSAVH
Trigger: GTGTACTGCACTTACCCTCAATCCAGCCCCGGAGAA...TGCAGCTCTTTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp GCACCAACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCAGCAGCTGGGCATGTGTaGGCTCTTACACAAGAGACT +
Preference number: 5 (lower is better)
Translates to: APTFPFQTIHHHGWKAAPAAGHV*ALTQET
Trigger: AGTCTCTTGTGTAAGAGCCAACACATGCCCAGCTGC...TGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp ACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTAAGTTGGCATTGGTGTaGACGTGCATGAAGGACCTG +
Preference number: 5 (lower is better)
Translates to: TFPFQTIHHHGWKAAPPAKLALV*TCMKDL
Trigger: CAGGTCCTTCATGCACGTCAACACCAATGCCAACTT...AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp TTCACTTGCTTCTCCGGGGCTGGATTGAGGGTAAGTGCAGTACACCTGGAGATCCTAGGGCTCAAGGTGTaGAGGTCCACACTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: FTCFSGAGLRVSAVHLEILGLKV*RSTLKR
Trigger: TCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAG...GATCTCCAGGTGTACTGCACTTACCCTCAATCCAGCCCCGGAGAAGCAAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp ACCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCGCCCACAAGGCCTCTTaGTGTAGGGACCATTCATCC +
Preference number: 5 (lower is better)
Translates to: TTNKGSIWTLRHVSCLPGAHKAS*CRDHSS
Trigger: GGATGAATGGTCCCTACACAAAGAGGCCTTGTGGGC...GCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp AGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAAGAGCTGCAACGAGTGGCTTGGGCTaGCCAACACTACAATTCAGG +
Preference number: 5 (lower is better)
Translates to: RAESSTSGCYIPPGERAATSGLG*PTLQFR
Trigger: CCTGAATTGTAGTGTTGGCAAGCCCAAGCCACTCGT...TGCAGCTCTTTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp CACCTGGAGAAAGAGCTGCACATTCTAGCCTATGAGGGACCCACCCTTTTCACTCTGAGGACCTTCTCTTaGCCCAGAGTGACCCTGAAG +
Preference number: 5 (lower is better)
Translates to: HLEKELHILAYEGPTLFTLRTFS*PRVTLK
Trigger: CTTCAGGGTCACTCTGGGCAAAGAGAAGGTCCTCAG...AGTGAAAAGGGTGGGTCCCTCATAGGCTAGAATGTGCAGCTCTTTCTCCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp TCAGGGAGCAGCAAACCCAAAATCTTGCCCAGCTCCACCTTATGGAGCTGGACAGAAGACACATACTGGTaGTTCAGGGCTGCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: SGSSKPKILPSSTLWSWTEDTYW*FRAAVV
Trigger: GACCACAGCAGCCCTGAACAACCAGTATGTGTCTTC...TGTCCAGCTCCATAAGGTGGAGCTGGGCAAGATTTTGGGTTTGCTGCTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp GGGGAGAGTGGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGTTCTCCGGGGCTGGATaGAGGGTAAGTGCAGTACAC +
Preference number: 5 (lower is better)
Translates to: GESGLHLHSSFTRAQGVEFSGAG*RVSAVH
Trigger: GTGTACTGCACTTACCCTCAATCCAGCCCCGGAGAA...CTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp GCGCCACCTGCTGCCCATCATATTATGGCTCACATACCCATAATTTCCTTGCGGACCCACCCTTTTCACTaGCTTCTCCGGGGCTGGATT +
Preference number: 5 (lower is better)
Translates to: APPAAHHIMAHIPIISLRTHPFH*LLRGWI
Trigger: AATCCAGCCCCGGAGAAGCAAGTGAAAAGGGTGGGT...CCGCAAGGAAATTATGGGTATGTGAGCCATAATATGATGGGCAGCAGGTGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp ACAGTGTGTTTCCTAAACATGGCAGCTCGGGACACCTTTGCCCACGGCCTCCCCATGAAGCTTAGGATTTaGGTAACTGGGTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: TVCFLNMAARDTFAHGLPMKLRI*VTGSSE
Trigger: CTCTGAGGACCCAGTTACCAAAATCCTAAGCTTCAT...GGGGAGGCCGTGGGCAAAGGTGTCCCGAGCTGCCATGTTTAGGAAACACACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590342.1
CDS-3UTR CAA 90 bp ACCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCCACCCGGCCATTCTTTaGAGCCAAAGCCTGGTCAAT +
Preference number: 5 (lower is better)
Translates to: TTNKGSIWTLRHVSCLPGHPAIL*SQSLVN
Trigger: ATTGACCAGGCTTTGGCTCAAAAGAATGGCCGGGTG...GCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590342.1
CDS-3UTR CAA 90 bp CCACCAATAAAGGATCCATTTGGACACTCCGCCATGTCTCATGTCTGCCTGGCTCTAGGGCTCAAGGTGTaGAGGTCCACACTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: PPIKDPFGHSAMSHVCLALGLKV*RSTLKR
Trigger: TCTCTTGAGTGTGGACCTCAACACCTTGAGCCCTAG...AGCCAGGCAGACATGAGACATGGCGGAGTGTCCAAATGGATCCTTTATTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590342.1
ENST00000590935.1
CDS-3UTR CAA 90 bp AGCGCCACCTGCTGCCCATCATATTATGGCTCACATACCCATAATTTCCTTGCGGCCCACAAGGCCTCTTaGTGTAGGGACCATTCATCC +
Preference number: 5 (lower is better)
Translates to: SATCCPSYYGSHTHNFLAAHKAS*CRDHSS
Trigger: GGATGAATGGTCCCTACACAAAGAGGCCTTGTGGGC...CGCAAGGAAATTATGGGTATGTGAGCCATAATATGATGGGCAGCAGGTGGCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp AGAGCAGAAAGCTCTACTTCGGGGTGCTACATCCCACCTGGAGAAAGAGCTGCAAGCAAACCCAAAATCTaGCCCAGCTCCACCTTATGG +
Preference number: 5 (lower is better)
Translates to: RAESSTSGCYIPPGERAASKPKI*PSSTLW
Trigger: CCATAAGGTGGAGCTGGGCAAGATTTTGGGTTTGCT...TGCAGCTCTTTCTCCAGGTGGGATGTAGCACCCCGAAGTAGAGCTTTCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp CATAATTTCCTTGCGGTGCTGAATTCCAAGTGGGGATTATTAGAGACCCCTCAGTTGGCTAGTCTGTCATaGAGCTGGCAGAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: HNFLAVLNSKWGLLETPQLASLS*SWQSWA
Trigger: GGCCCAGCTCTGCCAGCTCAATGACAGACTAGCCAA...CTGAGGGGTCTCTAATAATCCCCACTTGGAATTCAGCACCGCAAGGAAATTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR CAA 90 bp CATAATTTCCTTGCGGTGCTGAATTCCAAGTGGGGATTATTAGAGACCCCTCAGGAGAGGATTCGGGAGTaGGGGAAGGGAGGTCATGAG +
Preference number: 5 (lower is better)
Translates to: HNFLAVLNSKWGLLETPQERIRE*GKGGHE
Trigger: CTCATGACCTCCCTTCCCCAACTCCCGAATCCTCTC...CTGAGGGGTCTCTAATAATCCCCACTTGGAATTCAGCACCGCAAGGAAATTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp AAGGCAGCGCCACCTGCTGCCCATCATATTATGGCTCACATACCCATAATTTCCCTTTCACTTCCCTGCTaGTCTTCTGGCCGCGTTTCT +
Preference number: 5 (lower is better)
Translates to: KAAPPAAHHIMAHIPIISLSLPC*SSGRVS
Trigger: AGAAACGCGGCCAGAAGACAAGCAGGGAAGTGAAAG...GGAAATTATGGGTATGTGAGCCATAATATGATGGGCAGCAGGTGGCGCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp AGCGCCACCTGCTGCCCATCATATTATGGCTCACATACCCATAATTTCCTTGCGGCAGCTGGGCATGTGTaGGCTCTTACACAAGAGACT +
Preference number: 5 (lower is better)
Translates to: SATCCPSYYGSHTHNFLAAAGHV*ALTQET
Trigger: AGTCTCTTGTGTAAGAGCCAACACATGCCCAGCTGC...CGCAAGGAAATTATGGGTATGTGAGCCATAATATGATGGGCAGCAGGTGGCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp GCTGTCCAGGAACAGCTCCCATCCGCAGCTGGGCATGTGTTGGCTCTTACACAAAACTCCATCATTCTTTaGAGCCAAAGCCTGGTCAAT +
Preference number: 5 (lower is better)
Translates to: AVQEQLPSAAGHVLALTQNSIIL*SQSLVN
Trigger: ATTGACCAGGCTTTGGCTCAAAAGAATGATGGAGTT...TTGTGTAAGAGCCAACACATGCCCAGCTGCGGATGGGAGCTGTTCCTGGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590935.1
CDS-3UTR CAA 90 bp ATTTCTTTCGTTTTAGGTAAGACTCCTTCACAAGGCCTTGCGAGTGATCCTACCGCCAAGATCGCGCCATaGCTCTTCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: ISFVLGKTPSQGLASDPTAKIAP*LFSLGN
Trigger: GTTGCCCAGGCTGAAGAGCAATGGCGCGATCTTGGC...GGTAGGATCACTCGCAAGGCCTTGTGAAGGAGTCTTACCTAAAACGAAAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590935.1
CDS-3UTR CAA 90 bp AGCATCTTAACTTGTGGCACAAAAGGCACCAACATTCCCTTTCCAAACCATCCATTGGCTAGTCTGTCATaGAGCTGGCAGAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SILTCGTKGTNIPFPNHPLASLS*SWQSWA
Trigger: GGCCCAGCTCTGCCAGCTCAATGACAGACTAGCCAA...TGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTGTGCCACAAGTTAAGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226004.8
ENST00000590753.1
ENST00000590935.1
CDS-3UTR CAA 90 bp GGCCTGCATTTGCATAGTTCCTTTACTAGGGCTCAAGGTGTTGAGGTCCACACTTTTGGCGCTCTAATTTaGCCTGGATGGTGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: GLHLHSSFTRAQGVEVHTFGALI*PGWCSV
Trigger: GACAGAGCACCATCCAGGCAAAATTAGAGCGCCAAA...AGTGTGGACCTCAACACCTTGAGCCCTAGTAAAGGAACTATGCAAATGCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp AGCGCCACCTGCTGCCCATCATATTATGGCTCACATACCCATAATTTCCTTGCGGAGAGTGGCCTGCATTaGCATAGTTCCTTTACTAGG +
Preference number: 5 (lower is better)
Translates to: SATCCPSYYGSHTHNFLAESGLH*HSSFTR
Trigger: CCTAGTAAAGGAACTATGCAAATGCAGGCCACTCTC...CGCAAGGAAATTATGGGTATGTGAGCCATAATATGATGGGCAGCAGGTGGCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590935.1
CDS-3UTR CAA 90 bp ACATTCCCTTTCCAAACCATCCATCACCATGGGTGGAAGGCAGCGCCACCTGCTAAAACCTTGACTTACTaGCAAGGACTATCACGGTTA +
Preference number: 5 (lower is better)
Translates to: TFPFQTIHHHGWKAAPPAKTLTY*QGLSRL
Trigger: TAACCGTGATAGTCCTTGCAAGTAAGTCAAGGTTTT...AGCAGGTGGCGCTGCCTTCCACCCATGGTGATGGATGGTTTGGAAAGGGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS-3UTR CAA 90 bp ATCTTAGGCCTTACACTTCCACACACCTCCTGCCGTGGGCCATCGGGAAGCATGAATCAGGATAAAACCTaGACTTACTTGCAAGGACTA +
Preference number: 5 (lower is better)
Translates to: ILGLTLPHTSCRGPSGSMNQDKT*TYLQGL
Trigger: TAGTCCTTGCAAGTAAGTCAAGGTTTTATCCTGATT...CATGCTTCCCGATGGCCCACGGCAGGAGGTGTGTGGAAGTGTAAGGCCTAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226004.8
CDS TCA 90 bp GCTCCTATTTCACATCTCAGAATGTTAACACTGGTTCTTTCCTGCTaGTTAGACATTCTTAGCGTTGCCCACGTAGATCCGCGGGGTGAC +
Preference number: 5 (lower is better)
Translates to: APISHLRMLTLVLSC*LDILSVAHVDPRGD
Trigger: GTCACCCCGCGGATCTACGTGGGCAACGCTAAGAATGTCTAATCAGCAGGAAAGAACCAGTGTTAACATTCTGAGATGTGAAATAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590342.1
CDS-3UTR CAA 90 bp CATAATTTCCTTGCGGTGCTGAATTCCAAGTGGGGATTATTAGAGACCCCTCAGAACTCCATCATTCTTTaGAGCCAAAGCCTGGTCAAT +
Preference number: 5 (lower is better)
Translates to: HNFLAVLNSKWGLLETPQNSIIL*SQSLVN
Trigger: ATTGACCAGGCTTTGGCTCAAAAGAATGATGGAGTT...CTGAGGGGTCTCTAATAATCCCCACTTGGAATTCAGCACCGCAAGGAAATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590753.1
ENST00000590935.1
CDS-3UTR CAA 90 bp TTTTTCACTATCTGGAGAAGAAGACACATACTGGTTGTTCAGGGCTGCTGTGGTAAAACCTTGACTTACTaGCAAGGACTATCACGGTTA +
Preference number: 5 (lower is better)
Translates to: FFTIWRRRHILVVQGCCGKTLTY*QGLSRL
Trigger: TAACCGTGATAGTCCTTGCAAGTAAGTCAAGGTTTT...ACCACAGCAGCCCTGAACAACCAGTATGTGTCTTCTTCTCCAGATAGTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226004.8
CDS-3UTR CAA 90 bp AAGAGGCAACAAAAGTTAAGCTTCCAACGAATCTGTTCTCTCAACCGGAAATGTAATCAGGATAAAACCTaGACTTACTTGCAAGGACTA +
Preference number: 5 (lower is better)
Translates to: KRQQKLSFQRICSLNRKCNQDKT*TYLQGL
Trigger: TAGTCCTTGCAAGTAAGTCAAGGTTTTATCCTGATT...ACATTTCCGGTTGAGAGAACAGATTCGTTGGAAGCTTAACTTTTGTTGCCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226004.8
ENST00000590753.1
CDS TCA 72 bp TGGACGAGCACCCGGCCTGGGAGGTGGAGGTTGCGGTaGGCCAAGATCGCGCCATTGCTCTTCAGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: WTSTRPGRWRLR*AKIAPLLFSLG
Trigger: GCCCAGGCTGAAGAGCAATGGCGCGATCTTGGCTCACCGCAACCTCCACCTCCCAGGCCGGGTGCTCGTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590753.1
CDS CAA 72 bp CTGGAAATCCCGGCCCAGCTCCCCGGACTCGCTCATTaGGGGTGTTTAGGTTCCCTGATCCGGGACTGCCGG +
Preference number: 6 (lower is better)
Translates to: LEIPAQLPGLAH*GCLGSLIRDCR
Trigger: CCGGCAGTCCCGGATCAGGGAACCTAAACACCCCAAATGAGCGAGTCCGGGGAGCTGGGCCGGGATTTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591618.1
CDS CCA 72 bp TCCTGTAAATCAAATCACATCTGGAAGGTGGGGGCCTaGAAATCCCGGCCCAGCTCCCCGGACTCGCTCATT +
Preference number: 6 (lower is better)
Translates to: SCKSNHIWKVGA*KSRPSSPDSLI
Trigger: AATGAGCGAGTCCGGGGAGCTGGGCCGGGATTTCCAGGCCCCCACCTTCCAGATGTGATTTGATTTACAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591618.1
CDS TCA 72 bp TCACATCTCAGAATGTTAACACTGGTTCTTTCCTGCTaGTTAGACATTCTTAGCGTTGCCCACGTAGATCCG +
Preference number: 6 (lower is better)
Translates to: SHLRMLTLVLSC*LDILSVAHVDP
Trigger: CGGATCTACGTGGGCAACGCTAAGAATGTCTAATCAGCAGGAAAGAACCAGTGTTAACATTCTGAGATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590342.1