RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DUSP28 (Homo sapiens)

Ensembl gene IDs: ENSG00000188542

Ensembl transcript IDs: ENST00000343217.6, ENST00000405954.2, ENST00000438823.1, ENST00000479788.5

Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTGTGGAGGCGAGTGCACTGGGCGGCCGTGGTGCCGTGGGACCATaGACCTCAGAGGGCACTGGTGGCAGGACCGCAGAGCGGGCCCTT +
Preference number: 1 (lower is better)
Translates to: SVEASALGGRGAVGP*TSEGTGGRTAERAL
Trigger: AAGGGCCCGCTCTGCGGTCCTGCCACCAGTGCCCTCTGAGGTCCATGGTCCCACGGCACCACGGCCGCCCAGTGCACTCGCCTCCACACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR CCA 90 bp GAAAACTCAGTGTGGAGGCGAGTGCACTGGGCGGCCGTGGTGCCGTaGGACCATGGACCTCAGAGGGCACTGGTGGCAGGACCGCAGAGC +
Preference number: 1 (lower is better)
Translates to: ENSVWRRVHWAAVVP*DHGPQRALVAGPQS
Trigger: GCTCTGCGGTCCTGCCACCAGTGCCCTCTGAGGTCCATGGTCCCACGGCACCACGGCCGCCCAGTGCACTCGCCTCCACACTGAGTTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR CCA 90 bp CTGGGAGGTGGGAGGAAGGAGATGTACTGTGGCTTCAGCAGCTGGTaGGCAGGAGGCTCTGCTGGCAGCTCCAGGTGCCCTCCACAGCCA +
Preference number: 1 (lower is better)
Translates to: LGGGRKEMYCGFSSW*AGGSAGSSRCPPQP
Trigger: TGGCTGTGGAGGGCACCTGGAGCTGCCAGCAGAGCCTCCTGCCCACCAGCTGCTGAAGCCACAGTACATCTCCTTCCTCCCACCTCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR GCA 90 bp GGGTTCCCTCACCAGGCCGTCTGTCAGCACAGCCTCCTTCTCCCCTaGCTGTCACAGGAGGGGCTTCCCATGTTCGGTGCCCAGATGAGA +
Preference number: 1 (lower is better)
Translates to: GFPHQAVCQHSLLLP*LSQEGLPMFGAQMR
Trigger: TCTCATCTGGGCACCGAACATGGGAAGCCCCTCCTGTGACAGGCAGGGGAGAAGGAGGCTGTGCTGACAGACGGCCTGGTGAGGGAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR GCA 90 bp GAGATTAAGAAAGTGACAATGGGCGGGTCTCCCTTTGGTTCCTGCTaGTCTGGTCATGTCTGTAGTGAGCTGCGTGGGAGCCGTGCTATG +
Preference number: 1 (lower is better)
Translates to: EIKKVTMGGSPFGSC*SGHVCSELRGSRAM
Trigger: CATAGCACGGCTCCCACGCAGCTCACTACAGACATGACCAGAGCAGCAGGAACCAAAGGGAGACCCGCCCATTGTCACTTTCTTAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR GCA 90 bp TCAGAGATTAAGAAAGTGACAATGGGCGGGTCTCCCTTTGGTTCCTaGTGCTCTGGTCATGTCTGTAGTGAGCTGCGTGGGAGCCGTGCT +
Preference number: 1 (lower is better)
Translates to: SEIKKVTMGGSPFGS*CSGHVCSELRGSRA
Trigger: AGCACGGCTCCCACGCAGCTCACTACAGACATGACCAGAGCAGCAGGAACCAAAGGGAGACCCGCCCATTGTCACTTTCTTAATCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR CCA 90 bp CTTATGGGGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTaGCTTGACAGTAGCTATGTGACCTTAAGTTGGGGTGCAATGTTG +
Preference number: 1 (lower is better)
Translates to: LMGFHPHTAGEAAPC*LDSSYVTLSWGAML
Trigger: CAACATTGCACCCCAACTTAAGGTCACATAGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACCCCATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR TCA 90 bp AGTGGTTTAGATTTTCCTGACCAAGGCTTGTTTAATAAGCTGAGCTaGCCAGAGGGAGAGGACGGAGCAGATGGTGGTGCAGGGGTCCAT +
Preference number: 1 (lower is better)
Translates to: SGLDFPDQGLFNKLS*PEGEDGADGGAGVH
Trigger: ATGGACCCCTGCACCACCATCTGCTCCGTCCTCTCCCTCTGGTCAGCTCAGCTTATTAAACAAGCCTTGGTCAGGAAAATCTAAACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR CCA 90 bp GCTGCTCTGGTCATGTCTGTAGTGAGCTGCGTGGGAGCCGTGCTATaGAATAAAAAGTATGGTGACATTTGGTACCTGAAAGAGGATTCC +
Preference number: 1 (lower is better)
Translates to: AALVMSVVSCVGAVL*NKKYGDIWYLKEDS
Trigger: GGAATCCTCTTTCAGGTACCAAATGTCACCATACTTTTTATTCCATAGCACGGCTCCCACGCAGCTCACTACAGACATGACCAGAGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR CCA 90 bp GTGGTGGCTTATGGGGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGCTCAGAGGGCACTGGTaGCAGGACCGCAGAGCGGGC +
Preference number: 2 (lower is better)
Translates to: VVAYGVPPSHGGRGSTLLLRGHW*QDRRAG
Trigger: GCCCGCTCTGCGGTCCTGCCACCAGTGCCCTCTGAG...CAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACCCCATAAGCCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR GCA 90 bp AAAACTCAGTGTGGAGGCGAGTGCACTGGGCGGCCGTGGTGCCGTGGGACCATGGCAGTGAGCCGGGATTaGGCCACTGCACTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: KTQCGGECTGRPWCRGTMAVSRD*ATALQP
Trigger: AGGCTGGAGTGCAGTGGCGCAATCCCGGCTCACTGC...CATGGTCCCACGGCACCACGGCCGCCCAGTGCACTCGCCTCCACACTGAGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR GCA 90 bp GGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCTTGACAGTAGCTACTGGGCGGCCGTGGTaGCGTGGGACCATGGACCTC +
Preference number: 2 (lower is better)
Translates to: GSTLTRRERQHLVGLTVATGRPW*RGTMDL
Trigger: GAGGTCCATGGTCCCACGGCACCACGGCCGCCCAGT...AGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR CCA 90 bp GTGGTGGCTTATGGGGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGGCTTCAGCAGCTGGTaGGCAGGAGGCTCTGCTGGC +
Preference number: 2 (lower is better)
Translates to: VVAYGVPPSHGGRGSTLLGFSSW*AGGSAG
Trigger: GCCAGCAGAGCCTCCTGCCCACCAGCTGCTGAAGCC...CAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACCCCATAAGCCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR TCA 90 bp AAAACTCAGTGTGGAGGCGAGTGCACTGGGCGGCCGTGGTGCCGTGGGACCATGATGTGGGTGACACTGTaGAGGCCTCGAATGGGGAGC +
Preference number: 2 (lower is better)
Translates to: KTQCGGECTGRPWCRGTMMWVTL*RPRMGS
Trigger: GCTCCCCATTCGAGGCCTTCACAGTGTCACCCACAT...CATGGTCCCACGGCACCACGGCCGCCCAGTGCACTCGCCTCCACACTGAGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR CCA 90 bp AAAACTCAGTGTGGAGGCGAGTGCACTGGGCGGCCGTGGTGCCGTGGGACCATGTGTGAAGGCCTCGAATaGGGAGCTCCTTCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: KTQCGGECTGRPWCRGTMCEGLE*GAPSCR
Trigger: TCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACA...CATGGTCCCACGGCACCACGGCCGCCCAGTGCACTCGCCTCCACACTGAGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR TCA 90 bp GGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCTTGACAGTAGCTCCACTTCAGGGCCACTaGGGTGGAGGATTCTCTTGT +
Preference number: 2 (lower is better)
Translates to: GSTLTRRERQHLVGLTVAPLQGH*GGGFSC
Trigger: ACAAGAGAATCCTCCACCTCAGTGGCCCTGAAGTGG...AGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR GCA 90 bp TCTGATGCGCAGACCCTTGCCCCACCAGCAAGAGGGGACAGAGACCCTCTGGAGCCCTTTGGTTCCTGCTaGTCTGGTCATGTCTGTAGT +
Preference number: 2 (lower is better)
Translates to: SDAQTLAPPARGDRDPLEPFGSC*SGHVCS
Trigger: ACTACAGACATGACCAGAGCAGCAGGAACCAAAGGG...CTCCAGAGGGTCTCTGTCCCCTCTTGCTGGTGGGGCAAGGGTCTGCGCATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR TCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCATGTGGGTGACACTGTaGAGGCCTCGAATGGGGAGC +
Preference number: 2 (lower is better)
Translates to: KWKEVNVGDTVKASNGELMWVTL*RPRMGS
Trigger: GCTCCCCATTCGAGGCCTTCACAGTGTCACCCACAT...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
3UTR-3UTR TCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCGCCTGGGCACCAGAGTaGGACTCCGTCTCAAGAAAA +
Preference number: 2 (lower is better)
Translates to: KWKEVNVGDTVKASNGELAWAPE*DSVSRK
Trigger: TTTTCTTGAGACGGAGTCTCACTCTGGTGCCCAGGC...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR GCA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACAGCCTTCTGTATCAGTaGAGGGACATCCTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: VNVGDTVKASNGELLPADSLLYQ*RDILPP
Trigger: TGGAGGAAGGATGTCCCTGCACTGATACAGAAGGCT...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR GCA 90 bp GGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCTTGACAGTAGCTCCCAATCACCCAAGTTaGCCTTCAACAATGTCTTCA +
Preference number: 2 (lower is better)
Translates to: GSTLTRRERQHLVGLTVAPNHPS*PSTMSS
Trigger: TGAAGACATTGTTGAAGGGCAACTTGGGTGATTGGG...AGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR GCA 90 bp AGGACCGCAGAGCGGGCCCTTCAGGCCACTTCAGGGCCACTGAGGTGGAGGATTCTTGAGAGAAATTTCTaGAACCCACAGTCAGCAATT +
Preference number: 2 (lower is better)
Translates to: RTAERALQATSGPLRWRILERNF*NPQSAI
Trigger: AATTGCTGACTGTGGGTTGCAGAAATTTCTCTCAAG...AATCCTCCACCTCAGTGGCCCTGAAGTGGCCTGAAGGGCCCGCTCTGCGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR GCA 90 bp CTTGACAGTAGCTATGTGACCTTAAGTTGGGGTGCAATGTTGGTGAAACAGAGACAGTGTGGAGGCGAGTaGACTGGGCGGCCGTGGTGC +
Preference number: 2 (lower is better)
Translates to: LDSSYVTLSWGAMLVKQRQCGGE*TGRPWC
Trigger: GCACCACGGCCGCCCAGTGCACTCGCCTCCACACTG...TCTCTGTTTCACCAACATTGCACCCCAACTTAAGGTCACATAGCTACTGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR CCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCTGTGAAGGCCTCGAATaGGGAGCTCCTTCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: KWKEVNVGDTVKASNGELCEGLE*GAPSCR
Trigger: TCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACA...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
3UTR-3UTR GCA 90 bp CTTGACAGTAGCTATGTGACCTTAAGTTGGGGTGCAATGTTGGTGAAACAGAGACCGGGAGGCGGAGCTTaGAGTGAGCCAAGATGGCGC +
Preference number: 2 (lower is better)
Translates to: LDSSYVTLSWGAMLVKQRPGGGA*SEPRWR
Trigger: GCGCCATCTTGGCTCACTGCAAGCTCCGCCTCCCGG...TCTCTGTTTCACCAACATTGCACCCCAACTTAAGGTCACATAGCTACTGTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR TCA 90 bp GGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCTTGACAGTAGCTAACACAAAACTGTTATaGCAAGATTCATGGGACACG +
Preference number: 2 (lower is better)
Translates to: GSTLTRRERQHLVGLTVANTKLL*QDSWDT
Trigger: CGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTT...AGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR TCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCAGAGATTAAGAAAGTaGCAATGGGCGGGTCTCCCT +
Preference number: 2 (lower is better)
Translates to: KWKEVNVGDTVKASNGELQRLRK*QWAGLP
Trigger: AGGGAGACCCGCCCATTGTCACTTTCTTAATCTCTG...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR CCA 90 bp TCTGATGCGCAGACCCTTGCCCCACCAGCAAGAGGGGACAGAGACCCTCTGGAGGCCCAGTTTATAAACTaGGATCAAGATGTGCATTAT +
Preference number: 2 (lower is better)
Translates to: SDAQTLAPPARGDRDPLEAQFIN*DQDVHY
Trigger: ATAATGCACATCTTGATCCCAGTTTATAAACTGGGC...CTCCAGAGGGTCTCTGTCCCCTCTTGCTGGTGGGGCAAGGGTCTGCGCATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR TCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCGTGACATTTGGTACCTaGAAGAGGATTCCAGCTCAC +
Preference number: 2 (lower is better)
Translates to: KWKEVNVGDTVKASNGELVTFGT*KRIPAH
Trigger: GTGAGCTGGAATCCTCTTTCAGGTACCAAATGTCAC...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR GCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACACAGCTTCTGTATCAGTaGAGGGACATCCTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATQLLYQ*RDILPP
Trigger: TGGAGGAAGGATGTCCCTGCACTGATACAGAAGCTG...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
3UTR-3UTR CCA 90 bp CTTGACAGTAGCTATGTGACCTTAAGTTGGGGTGCAATGTTGGTGAAACAGAGAGGGCGGGTCTCCCTTTaGTTCCTGCTGCTCTGGTCA +
Preference number: 2 (lower is better)
Translates to: LDSSYVTLSWGAMLVKQRGRVSL*FLLLWS
Trigger: TGACCAGAGCAGCAGGAACCAAAGGGAGACCCGCCC...TCTCTGTTTCACCAACATTGCACCCCAACTTAAGGTCACATAGCTACTGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR CCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCTGGGACACGTTTAAGTaGAAAGAGGTGAATGTGGGT +
Preference number: 2 (lower is better)
Translates to: KWKEVNVGDTVKASNGELWDTFK*KEVNVG
Trigger: ACCCACATTCACCTCTTTCCACTTAAACGTGTCCCA...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
3UTR-3UTR GCA 90 bp TTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGAGACACGGCAGGCTTTaGCAGAAACAGCTTCTGTAT +
Preference number: 2 (lower is better)
Translates to: FKWKEVNVGDTVKASNGERHGRL*QKQLLY
Trigger: ATACAGAAGCTGTTTCTGGCAAAGCCTGCCGTGTCT...CTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
3UTR-3UTR GCA 90 bp CTTGACAGTAGCTATGTGACCTTAAGTTGGGGTGCAATGTTGGTGAAACAGAGAATGTCTGTAGTGAGCTaGGTGGGAGCCGTGCTATGG +
Preference number: 2 (lower is better)
Translates to: LDSSYVTLSWGAMLVKQRMSVVS*VGAVLW
Trigger: CCATAGCACGGCTCCCACGCAGCTCACTACAGACAT...TCTCTGTTTCACCAACATTGCACCCCAACTTAAGGTCACATAGCTACTGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR TCA 90 bp GGAACACAAAACTGTTATGACAAGATTCATGGGACACGTTTAAGTGGAAAGAGGATGTGGGTGACACTGTaGAGGCCTCGAATGGGGAGC +
Preference number: 2 (lower is better)
Translates to: GTQNCYDKIHGTRLSGKRMWVTL*RPRMGS
Trigger: GCTCCCCATTCGAGGCCTTCACAGTGTCACCCACAT...CCTCTTTCCACTTAAACGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
3UTR-3UTR GCA 90 bp GTGCTATGGAATAAAAAGTATGGTGACATTTGGTACCTGAAAGAGGATTCCAGCTGGGGAGCTCCTTCCTaGAGACACAGTCCCGATGTG +
Preference number: 2 (lower is better)
Translates to: VLWNKKYGDIWYLKEDSSWGAPS*RHSPDV
Trigger: CACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCA...GCTGGAATCCTCTTTCAGGTACCAAATGTCACCATACTTTTTATTCCATAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR CCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCAAACACTCAAGATTCTaGAGTGTAAATAATGGAGGA +
Preference number: 2 (lower is better)
Translates to: KWKEVNVGDTVKASNGELKHSRF*SVNNGG
Trigger: TCCTCCATTATTTACACTCCAGAATCTTGAGTGTTT...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR CCA 90 bp CTTGACAGTAGCTATGTGACCTTAAGTTGGGGTGCAATGTTGGTGAAACAGAGATGGGACACGTTTAAGTaGAAAGAGGTGAATGTGGGT +
Preference number: 2 (lower is better)
Translates to: LDSSYVTLSWGAMLVKQRWDTFK*KEVNVG
Trigger: ACCCACATTCACCTCTTTCCACTTAAACGTGTCCCA...TCTCTGTTTCACCAACATTGCACCCCAACTTAAGGTCACATAGCTACTGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR GCA 72 bp CACCAGGCCGTCTGTCAGCACAGCCTCCTTCTCCCCTaGCTGTCACAGGAGGGGCTTCCCATGTTCGGTGCC +
Preference number: 3 (lower is better)
Translates to: HQAVCQHSLLLP*LSQEGLPMFGA
Trigger: GGCACCGAACATGGGAAGCCCCTCCTGTGACAGGCAGGGGAGAAGGAGGCTGTGCTGACAGACGGCCTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR CCA 72 bp GCTGAGCTGACCAGAGGGAGAGGACGGAGCAGATGGTaGTGCAGGGGTCCATGTGGTCTGATGCGCAGACCC +
Preference number: 3 (lower is better)
Translates to: AELTRGRGRSRW*CRGPCGLMRRP
Trigger: GGGTCTGCGCATCAGACCACATGGACCCCTGCACCACCATCTGCTCCGTCCTCTCCCTCTGGTCAGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR CCA 72 bp GAATCAACATGCTTGGATGCCTCCAGTGGTGGCTTATaGGGTTCCACCCTCACACGGCGGGAGAGGCAGCAC +
Preference number: 3 (lower is better)
Translates to: ESTCLDASSGGL*GSTLTRRERQH
Trigger: GTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACCCCATAAGCCACCACTGGAGGCATCCAAGCATGTTGATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR CAA 90 bp TCTGATGCGCAGACCCTTGCCCCACCAGCAAGAGGGGACAGAGACCCTCTGGAGGGGCCTGACTGGGTCTaGTTAAGAGATACACAGCTT +
Preference number: 3 (lower is better)
Translates to: SDAQTLAPPARGDRDPLEGPDWV*LRDTQL
Trigger: AAGCTGTGTATCTCTTAACAAGACCCAGTCAGGCCC...CTCCAGAGGGTCTCTGTCCCCTCTTGCTGGTGGGGCAAGGGTCTGCGCATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR CAA 90 bp GTGGTGGCTTATGGGGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGAAGACACGGCAGGCTTaGCCAGAAACAGCTGAAATG +
Preference number: 3 (lower is better)
Translates to: VVAYGVPPSHGGRGSTLLKTRQA*PETAEM
Trigger: CATTTCAGCTGTTTCTGGCAAAGCCTGCCGTGTCTT...CAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACCCCATAAGCCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR CAA 90 bp GGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCTTGACAGTAGCTCATGAGGTCAGGAGATaGAGACCATCCTGGCTAACA +
Preference number: 3 (lower is better)
Translates to: GSTLTRRERQHLVGLTVAHEVRR*RPSWLT
Trigger: TGTTAGCCAGGATGGTCTCAATCTCCTGACCTCATG...AGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR GCA 72 bp AAAGTGACAATGGGCGGGTCTCCCTTTGGTTCCTGCTaGTCTGGTCATGTCTGTAGTGAGCTGCGTGGGAGC +
Preference number: 3 (lower is better)
Translates to: KVTMGGSPFGSC*SGHVCSELRGS
Trigger: GCTCCCACGCAGCTCACTACAGACATGACCAGAGCAGCAGGAACCAAAGGGAGACCCGCCCATTGTCACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR GCA 72 bp AAGAAAGTGACAATGGGCGGGTCTCCCTTTGGTTCCTaGTGCTCTGGTCATGTCTGTAGTGAGCTGCGTGGG +
Preference number: 3 (lower is better)
Translates to: KKVTMGGSPFGS*CSGHVCSELRG
Trigger: CCCACGCAGCTCACTACAGACATGACCAGAGCAGCAGGAACCAAAGGGAGACCCGCCCATTGTCACTTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR CCA 72 bp TTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTaGCTTGACAGTAGCTATGTGACCTTAAGTTGGGGT +
Preference number: 3 (lower is better)
Translates to: FHPHTAGEAAPC*LDSSYVTLSWG
Trigger: ACCCCAACTTAAGGTCACATAGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR TCA 72 bp GATTTTCCTGACCAAGGCTTGTTTAATAAGCTGAGCTaGCCAGAGGGAGAGGACGGAGCAGATGGTGGTGCA +
Preference number: 3 (lower is better)
Translates to: DFPDQGLFNKLS*PEGEDGADGGA
Trigger: TGCACCACCATCTGCTCCGTCCTCTCCCTCTGGTCAGCTCAGCTTATTAAACAAGCCTTGGTCAGGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR CCA 72 bp GGGACAGAGACCCTCTGGAGCTGCATTTCCGGAAGATaGGGCTTAACTGGGAAAAATGAAAACTCAGTGTGG +
Preference number: 3 (lower is better)
Translates to: GTETLWSCISGR*GLTGKNENSVW
Trigger: CCACACTGAGTTTTCATTTTTCCCAGTTAAGCCCCATCTTCCGGAAATGCAGCTCCAGAGGGTCTCTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR CAA 90 bp TCATGGGACACGTTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCAAGACACGGCAGGCTTaGCCAGAAACAGCTTCTGTA +
Preference number: 3 (lower is better)
Translates to: SWDTFKWKEVNVGDTVKAKTRQA*PETASV
Trigger: TACAGAAGCTGTTTCTGGCAAAGCCTGCCGTGTCTT...GGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAACGTGTCCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
3UTR TCA 72 bp TCTTTAGGCCACAGGATGTCCAGGAGAGGTGGTGTCTaGACTAGAGAAGGAATCAACATGCTTGGATGCCTC +
Preference number: 3 (lower is better)
Translates to: SLGHRMSRRGGV*TREGINMLGCL
Trigger: GAGGCATCCAAGCATGTTGATTCCTTCTCTAGTTCAGACACCACCTCTCCTGGACATCCTGTGGCCTAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR GCA 72 bp CCGGATAGAGAGACAAATGTAAGACACGGCAGGCTTTaGCAGAAACAGCTTCTGTATCAGTGCAGGGACATC +
Preference number: 3 (lower is better)
Translates to: PDRETNVRHGRL*QKQLLYQCRDI
Trigger: GATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCGTGTCTTACATTTGTCTCTCTATCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
3UTR GCA 72 bp ATTGTCCGAACTCCTATGGGACAGCTCCAGCTGTATTaGAGAGGGGCTGATGAAGAGAATAATTCCCCAATC +
Preference number: 3 (lower is better)
Translates to: IVRTPMGQLQLY*RGADEENNSPI
Trigger: GATTGGGGAATTATTCTCTTCATCAGCCCCTCTGCAATACAGCTGGAGCTGTCCCATAGGAGTTCGGACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR CCA 72 bp GTAGAATGCGCCGGCACCCCCAAACACTCAAGATTCTaGAGTGTAAATAATGGAGGATCCCTATTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: VECAGTPKHSRF*SVNNGGSLFAF
Trigger: AAAAGCAAATAGGGATCCTCCATTATTTACACTCCAGAATCTTGAGTGTTTGGGGGTGCCGGCGCATTCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR CCA 72 bp GTCATGTCTGTAGTGAGCTGCGTGGGAGCCGTGCTATaGAATAAAAAGTATGGTGACATTTGGTACCTGAAA +
Preference number: 3 (lower is better)
Translates to: VMSVVSCVGAVL*NKKYGDIWYLK
Trigger: TTTCAGGTACCAAATGTCACCATACTTTTTATTCCATAGCACGGCTCCCACGCAGCTCACTACAGACATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR-3UTR CAA 90 bp GGAACACAAAACTGTTATGACAAGATTCATGGGACACGTTTAAGTGGAAAGAGGAAGACACGGCAGGCTTaGCCAGAAACAGCTTCTGTA +
Preference number: 3 (lower is better)
Translates to: GTQNCYDKIHGTRLSGKRKTRQA*PETASV
Trigger: TACAGAAGCTGTTTCTGGCAAAGCCTGCCGTGTCTT...CCTCTTTCCACTTAAACGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
3UTR CCA 72 bp GGAGCCGTGCTATGGAATAAAAAGTATGGTGACATTTaGTACCTGAAAGAGGATTCCAGCTCACAGCATTGT +
Preference number: 3 (lower is better)
Translates to: GAVLWNKKYGDI*YLKEDSSSQHC
Trigger: ACAATGCTGTGAGCTGGAATCCTCTTTCAGGTACCAAATGTCACCATACTTTTTATTCCATAGCACGGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405954.2
3UTR TCA 72 bp TGCTATGGAATAAAAAGTATGGTGACATTTGGTACCTaGAAGAGGATTCCAGCTCACAGCATTGTGTTTGAC +
Preference number: 3 (lower is better)
Translates to: CYGIKSMVTFGT*KRIPAHSIVFD
Trigger: GTCAAACACAATGCTGTGAGCTGGAATCCTCTTTCAGGTACCAAATGTCACCATACTTTTTATTCCATAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp AGGACCGCAGAGCGGGCCCTTCAGGCCACTTCAGGGCCACTGAGGTGGAGGATTCGCCCCCGCGGCCTGTaGCACTGGGCTTGCGTCTGT +
Preference number: 4 (lower is better)
Translates to: RTAERALQATSGPLRWRIRPRGL*HWACVC
Trigger: ACAGACGCAAGCCCAGTGCCACAGGCCGCGGGGGCG...AATCCTCCACCTCAGTGGCCCTGAAGTGGCCTGAAGGGCCCGCTCTGCGGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp TCTGATGCGCAGACCCTTGCCCCACCAGCAAGAGGGGACAGAGACCCTCTGGAGGCACCGCGGCCTCCATaGCGGCGCACGTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SDAQTLAPPARGDRDPLEAPRPP*RRTWAP
Trigger: TGGAGCCCACGTGCGCCGCCATGGAGGCCGCGGTGC...CTCCAGAGGGTCTCTGTCCCCTCTTGCTGGTGGGGCAAGGGTCTGCGCATCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp TCTGATGCGCAGACCCTTGCCCCACCAGCAAGAGGGGACAGAGACCCTCTGGAGTGGAGGCGAGTGCACTaGGCGGCCGTGGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: SDAQTLAPPARGDRDPLEWRRVH*AAVVPW
Trigger: CCACGGCACCACGGCCGCCCAGTGCACTCGCCTCCA...CTCCAGAGGGTCTCTGTCCCCTCTTGCTGGTGGGGCAAGGGTCTGCGCATCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp AGGACCGCAGAGCGGGCCCTTCAGGCCACTTCAGGGCCACTGAGGTGGAGGATTGGGGTCCATGTGGTCTaGTGCGCAGACCCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: RTAERALQATSGPLRWRIGVHVV*CADPCP
Trigger: GGGGCAAGGGTCTGCGCATCAGACCACATGGACCCC...AATCCTCCACCTCAGTGGCCCTGAAGTGGCCTGAAGGGCCCGCTCTGCGGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp TCTGATGCGCAGACCCTTGCCCCACCAGCAAGAGGGGACAGAGACCCTCTGGAGCACGTGGGCTCCAGGTaGGCCAGCAGGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SDAQTLAPPARGDRDPLEHVGSR*ASRSSA
Trigger: GGCTGAGGACCTGCTGGCGCACCTGGAGCCCACGTG...CTCCAGAGGGTCTCTGTCCCCTCTTGCTGGTGGGGCAAGGGTCTGCGCATCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp TCTGATGCGCAGACCCTTGCCCCACCAGCAAGAGGGGACAGAGACCCTCTGGAGGCGGCCGTGGTGCCGTaGGACCATGGACCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SDAQTLAPPARGDRDPLEAAVVP*DHGPQR
Trigger: CCTCTGAGGTCCATGGTCCCACGGCACCACGGCCGC...CTCCAGAGGGTCTCTGTCCCCTCTTGCTGGTGGGGCAAGGGTCTGCGCATCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp AAAACTCAGTGTGGAGGCGAGTGCACTGGGCGGCCGTGGTGCCGTGGGACCATGGGCTTCAGCAGCTGGTaGGCAGGAGGCTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KTQCGGECTGRPWCRGTMGFSSW*AGGSAG
Trigger: GCCAGCAGAGCCTCCTGCCCACCAGCTGCTGAAGCC...CATGGTCCCACGGCACCACGGCCGCCCAGTGCACTCGCCTCCACACTGAGTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp GGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCTTGACAGTAGCTGCTCCCGAGGAAGAGTaGGGGCGCGACGCGCACCAA +
Preference number: 4 (lower is better)
Translates to: GSTLTRRERQHLVGLTVAAPEEE*GRDAHQ
Trigger: TTGGTGCGCGTCGCGCCCTCACTCTTCCTCGGGAGC...AGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACCGAGGTGGACCAGGCTaGGGCTTGGGTCCCCCGCGG +
Preference number: 4 (lower is better)
Translates to: VNVGDTVKASNGELLPADRGGPG*GLGPPR
Trigger: CCGCGGGGGACCCAAGCCCCAGCCTGGTCCACCTCG...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR CCA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACCGCGGGCCGGGCTGCTaGCGGGAGACGTTGACGCAC +
Preference number: 4 (lower is better)
Translates to: VNVGDTVKASNGELLPADRGPGC*RETLTH
Trigger: GTGCGTCAACGTCTCCCGCCAGCAGCCCGGCCCGCG...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR GCA 90 bp GGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCTTGACAGTAGCTGCCCGGGTTCGGTTCTaGTACCGGGCGAGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: GSTLTRRERQHLVGLTVAARVRF*YRASAL
Trigger: AAGAGCGCTCGCCCGGTAGCAGAACCGAACCCGGGC...AGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp GTGGTGGCTTATGGGGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCAGTGAGCCGGGATTaGGCCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VVAYGVPPSHGGRGSTLLAVSRD*ATALQP
Trigger: AGGCTGGAGTGCAGTGGCGCAATCCCGGCTCACTGC...CAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACCCCATAAGCCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp GGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCTTGACAGTAGCTCCGGGAGGCGGAGCTTaGAGTGAGCCAAGATGGCGC +
Preference number: 4 (lower is better)
Translates to: GSTLTRRERQHLVGLTVAPGGGA*SEPRWR
Trigger: GCGCCATCTTGGCTCACTGCAAGCTCCGCCTCCCGG...AGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACGCATGGCGGGAGGTTTaGGCCTCACCAGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: VNVGDTVKASNGELLPADAWREV*ASPGRR
Trigger: CCGGCGCCCTGGTGAGGCCCAAACCTCCCGCCATGC...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR CCA 90 bp CGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCCGAGGTGGACCAGGCTaGGGCTTGGGTCCCCCGCGG +
Preference number: 4 (lower is better)
Translates to: RQALPETASVSVQGHPSSRGGPG*GLGPPR
Trigger: CCGCGGGGGACCCAAGCCCCAGCCTGGTCCACCTCG...GGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CCA 90 bp CGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCCGCGGGCCGGGCTGCTaGCGGGAGACGTTGACGCAC +
Preference number: 4 (lower is better)
Translates to: RQALPETASVSVQGHPSSRGPGC*RETLTH
Trigger: GTGCGTCAACGTCTCCCGCCAGCAGCCCGGCCCGCG...GGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR CCA 90 bp AGGACCGCAGAGCGGGCCCTTCAGGCCACTTCAGGGCCACTGAGGTGGAGGATTGCGCTCTTCACCATCTaGAAGGCCTTCGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RTAERALQATSGPLRWRIALFTI*KAFARL
Trigger: CAGCCTGGCGAAGGCCTTCCAGATGGTGAAGAGCGC...AATCCTCCACCTCAGTGGCCCTGAAGTGGCCTGAAGGGCCCGCTCTGCGGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp GGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCTTGACAGTAGCTAGGCGGAGCTTGCAGTaGGCCAAGATGGCGCCCACT +
Preference number: 4 (lower is better)
Translates to: GSTLTRRERQHLVGLTVARRSLQ*AKMAPT
Trigger: AGTGGGCGCCATCTTGGCTCACTGCAAGCTCCGCCT...AGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp AGGACCGCAGAGCGGGCCCTTCAGGCCACTTCAGGGCCACTGAGGTGGAGGATTGAGGCGGGAGGATCATaGGGTCAGGAGATTGAGACC +
Preference number: 4 (lower is better)
Translates to: RTAERALQATSGPLRWRIEAGGS*GQEIET
Trigger: GGTCTCAATCTCCTGACCTCATGATCCTCCCGCCTC...AATCCTCCACCTCAGTGGCCCTGAAGTGGCCTGAAGGGCCCGCTCTGCGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp GGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCTTGACAGTAGCTGGCTGCGGCCGTTCTTaGAGTAGACTAGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GSTLTRRERQHLVGLTVAGCGRS*SRLGRR
Trigger: GCGCCTGCCTAGTCTACTGCAAGAACGGCCGCAGCC...AGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACCGGCGGCCGAGCGGCTaGGGCCGTTCTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: VNVGDTVKASNGELLPADRRPSG*GRSCSR
Trigger: TCTACTGCAAGAACGGCCGCAGCCGCTCGGCCGCCG...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR GCA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACCAGTGTGGAGGCGAGTaGACTGGGCGGCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VNVGDTVKASNGELLPADQCGGE*TGRPWC
Trigger: GCACCACGGCCGCCCAGTGCACTCGCCTCCACACTG...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp CGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCGGGCTTGGGTCTCGTTaGGGCCGGGGCATGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RQALPETASVSVQGHPSSGLGSR*GRGMAG
Trigger: TCCCGCCATGCCCCGGCCCCAACGAGACCCAAGCCC...GGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CCA 90 bp CGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCGACGCGCACCAACGGTaGAGGTACGGGCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RQALPETASVSVQGHPSSDAHQR*RYGRGG
Trigger: GCCGCCTCGCCCGTACCTCCACCGTTGGTGCGCGTC...GGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CCA 90 bp GGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCTTGACAGTAGCTCAGGCAGTGGGGATCTaGGTGGCAGGTCCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: GSTLTRRERQHLVGLTVAQAVGI*VAGPCD
Trigger: GTCACAGGGACCTGCCACCCAGATCCCCACTGCCTG...AGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACACCCTGCCCGCTCTACTaGGGCGTCTGGCGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATPCPLY*GVWRGG
Trigger: GCCTCCGCGCCAGACGCCGCAGTAGAGCGGGCAGGG...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR GCA 90 bp CTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCAGGCAGCTTGGGCGCAGCGCCCTaGCCGCTCTACTGCGGCGTC +
Preference number: 4 (lower is better)
Translates to: LCQKQLLYQCRDILPPGSLGAAP*PLYCGV
Trigger: GACGCCGCAGTAGAGCGGGCAGGGCGCTGCGCCCAA...GCTGCCTGGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR GCA 90 bp CGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCCACGTGGGCTCCAGGTaGGCCAGCAGGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RQALPETASVSVQGHPSSHVGSR*ASRSSA
Trigger: GGCTGAGGACCTGCTGGCGCACCTGGAGCCCACGTG...GGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR GCA 90 bp CGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCCGGCGGCCGAGCGGCTaGGGCCGTTCTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: RQALPETASVSVQGHPSSRRPSG*GRSCSR
Trigger: TCTACTGCAAGAACGGCCGCAGCCGCTCGGCCGCCG...GGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR GCA 90 bp CGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCAGGCTGAGGCCGCGGTaGCGCATGAGGTACGCGGTG +
Preference number: 4 (lower is better)
Translates to: RQALPETASVSVQGHPSSRLRPR*RMRYAV
Trigger: CACCGCGTACCTCATGCGGCACCGCGGCCTCAGCCT...GGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR GCA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACGCCCGGGTTCGGTTCTaGTACCGGGCGAGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: VNVGDTVKASNGELLPADARVRF*YRASAL
Trigger: AAGAGCGCTCGCCCGGTAGCAGAACCGAACCCGGGC...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR GCA 90 bp AAAACTCAGTGTGGAGGCGAGTGCACTGGGCGGCCGTGGTGCCGTGGGACCATGATGTCTGTAGTGAGCTaGGTGGGAGCCGTGCTATGG +
Preference number: 4 (lower is better)
Translates to: KTQCGGECTGRPWCRGTMMSVVS*VGAVLW
Trigger: CCATAGCACGGCTCCCACGCAGCTCACTACAGACAT...CATGGTCCCACGGCACCACGGCCGCCCAGTGCACTCGCCTCCACACTGAGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACGGACGGCGGGCTGCGTaGTTCCCGTGTCTTCACCCT +
Preference number: 4 (lower is better)
Translates to: VNVGDTVKASNGELLPADGRRAA*FPCLHP
Trigger: AGGGTGAAGACACGGGAACCACGCAGCCCGCCGTCC...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CCA 90 bp CTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCAGGCAGCTGCGTCTGTGGCTCTTaGGCGCAGCGCCCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LCQKQLLYQCRDILPPGSCVCGS*AQRPAR
Trigger: GCGGGCAGGGCGCTGCGCCCAAGAGCCACAGACGCA...GCTGCCTGGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CCA 90 bp CTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCAGGCAGCCGCCCCCGCGGCCTGTaGCACTGGGCTTGCGTCTGT +
Preference number: 4 (lower is better)
Translates to: LCQKQLLYQCRDILPPGSRPRGL*HWACVC
Trigger: ACAGACGCAAGCCCAGTGCCACAGGCCGCGGGGGCG...GCTGCCTGGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CCA 90 bp CGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCCCAGGAGTCTATTTGTaGGAGCCGGGCGGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RQALPETASVSVQGHPSSPGVYL*EPGGPP
Trigger: CGGCGGCCCGCCCGGCTCCCACAAATAGACTCCTGG...GGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCCATGGCGGCGCACGTaGGCTCCAGGTGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KWKEVNVGDTVKASNGELPWRRT*APGAPA
Trigger: TGCTGGCGCACCTGGAGCCCACGTGCGCCGCCATGG...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR CCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACAGCACCGCGGCCTCCATaGCGGCGCACGTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATAPRPP*RRTWAP
Trigger: TGGAGCCCACGTGCGCCGCCATGGAGGCCGCGGTGC...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR CCA 90 bp GTGGTGGCTTATGGGGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGAAATGCTCAGTGGATTaGCCGGGCGAGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: VVAYGVPPSHGGRGSTLLKCSVD*PGEVAH
Trigger: GTGAGCCACCTCGCCCGGCCAATCCACTGAGCATTT...CAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACCCCATAAGCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp TTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGGGCCGCGGTGCCGCATaGGGTACGCGGTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: FKWKEVNVGDTVKASNGEGRGAA*GTRCRR
Trigger: CCGTCTGCACCGCGTACCTCATGCGGCACCGCGGCC...CTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR GCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCACGTGGGCTCCAGGTaGGCCAGCAGGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: KWKEVNVGDTVKASNGELHVGSR*ASRSSA
Trigger: GGCTGAGGACCTGCTGGCGCACCTGGAGCCCACGTG...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR GCA 90 bp CGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCGCCCGGGTTCGGTTCTaGTACCGGGCGAGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: RQALPETASVSVQGHPSSARVRF*YRASAL
Trigger: AAGAGCGCTCGCCCGGTAGCAGAACCGAACCCGGGC...GGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR CCA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACCCTGAGGATCTATTTTaGGGGCTCAGGCGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: VNVGDTVKASNGELLPADPEDLF*GLRRPP
Trigger: GGGCGGGCGCCTGAGCCCCCAAAATAGATCCTCAGG...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR CCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACACCATGGCGGCGCACGTaGGCTCCAGGTGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATPWRRT*APGAPA
Trigger: TGCTGGCGCACCTGGAGCCCACGTGCGCCGCCATGG...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR CCA 90 bp GGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCTTGACAGTAGCTGTGCAGGGGTCCATGTaGTCTGATGCGCAGACCCTT +
Preference number: 4 (lower is better)
Translates to: GSTLTRRERQHLVGLTVAVQGSM*SDAQTL
Trigger: AAGGGTCTGCGCATCAGACCACATGGACCCCTGCAC...AGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp ACAAATGTAAGACACGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGGCCGCGGTGCCGCATaGGGTACGCGGTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: TNVRHGRLCQKQLLYQCRGRGAA*GTRCRR
Trigger: CCGTCTGCACCGCGTACCTCATGCGGCACCGCGGCC...CCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCGTGTCTTACATTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR GCA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACGCCCGCCGAAGAGTCTaGTTTTGGGCCCTGAGGATC +
Preference number: 4 (lower is better)
Translates to: VNVGDTVKASNGELLPADARRRV*FWALRI
Trigger: GATCCTCAGGGCCCAAAAGCAGACTCTTCGGCGGGC...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR GCA 90 bp CGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCGGCTGCGGCCGTTCTTaGAGTAGACTAGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: RQALPETASVSVQGHPSSGCGRS*SRLGRR
Trigger: GCGCCTGCCTAGTCTACTGCAAGAACGGCCGCAGCC...GGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR GCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACACGGCGGCCGAGCGGCTaGGGCCGTTCTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATRRPSG*GRSCSR
Trigger: TCTACTGCAAGAACGGCCGCAGCCGCTCGGCCGCCG...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR GCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACAAGGCTGAGGCCGCGGTaGCGCATGAGGTACGCGGTG +
Preference number: 4 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATRLRPR*RMRYAV
Trigger: CACCGCGTACCTCATGCGGCACCGCGGCCTCAGCCT...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR GCA 90 bp AAAACTCAGTGTGGAGGCGAGTGCACTGGGCGGCCGTGGTGCCGTGGGACCATGAGCCTTCTGTATCAGTaGAGGGACATCCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KTQCGGECTGRPWCRGTMSLLYQ*RDILPP
Trigger: TGGAGGAAGGATGTCCCTGCACTGATACAGAAGGCT...CATGGTCCCACGGCACCACGGCCGCCCAGTGCACTCGCCTCCACACTGAGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACACTCTACTGCGGCGTCTaGCGCGGAGGCGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATLYCGV*RGGVAW
Trigger: CCAAGCCACGCCTCCGCGCCAGACGCCGCAGTAGAG...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACACTGGGCTTGCGTCTGTaGCTCTTGGGCGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATLGLRL*LLGAAP
Trigger: GGGCGCTGCGCCCAAGAGCCACAGACGCAAGCCCAG...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CCA 90 bp TTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGAGGGCGCCGGGGCCTTaGACCGCTCTGCGTCCCATG +
Preference number: 4 (lower is better)
Translates to: FKWKEVNVGDTVKASNGERAPGP*TALRPM
Trigger: CATGGGACGCAGAGCGGTCCAAGGCCCCGGCGCCCT...CTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR CCA 90 bp TTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCCATGGCGGCGCACGTaGGCTCCAGGTGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: FKWKEVNVGDTVKASNGEPWRRT*APGAPA
Trigger: TGCTGGCGCACCTGGAGCCCACGTGCGCCGCCATGG...CTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR CCA 90 bp ACAAATGTAAGACACGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGCACCGCGGCCTCCATaGCGGCGCACGTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TNVRHGRLCQKQLLYQCRAPRPP*RRTWAP
Trigger: TGGAGCCCACGTGCGCCGCCATGGAGGCCGCGGTGC...CCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCGTGTCTTACATTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR CCA 90 bp GGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCTTGACAGTAGCTGAAGGAGATGTACTGTaGCTTCAGCAGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GSTLTRRERQHLVGLTVAEGDVL*LQQLVG
Trigger: GCCCACCAGCTGCTGAAGCCACAGTACATCTCCTTC...AGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp AAAACTCAGTGTGGAGGCGAGTGCACTGGGCGGCCGTGGTGCCGTGGGACCATGGTGACATTTGGTACCTaGAAGAGGATTCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: KTQCGGECTGRPWCRGTMVTFGT*KRIPAH
Trigger: GTGAGCTGGAATCCTCTTTCAGGTACCAAATGTCAC...CATGGTCCCACGGCACCACGGCCGCCCAGTGCACTCGCCTCCACACTGAGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp CTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCAGGCAGCCTGTGGCACTGGGCTTaGGTCTGTGGCTCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: LCQKQLLYQCRDILPPGSLWHWA*VCGSWA
Trigger: CGCCCAAGAGCCACAGACGCAAGCCCAGTGCCACAG...GCTGCCTGGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR GCA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACTGGGGAGCTCCTTCCTaGAGACACAGTCCCGATGTG +
Preference number: 4 (lower is better)
Translates to: VNVGDTVKASNGELLPADWGAPS*RHSPDV
Trigger: CACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCA...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR GCA 90 bp GTGGTGGCTTATGGGGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGCCCTTTGGTTCCTGCTaGTCTGGTCATGTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: VVAYGVPPSHGGRGSTLLPFGSC*SGHVCS
Trigger: ACTACAGACATGACCAGAGCAGCAGGAACCAAAGGG...CAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACCCCATAAGCCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp TCTGATGCGCAGACCCTTGCCCCACCAGCAAGAGGGGACAGAGACCCTCTGGAGTCTCCCTTTGGTTCCTaGTGCTCTGGTCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: SDAQTLAPPARGDRDPLESPFGS*CSGHVC
Trigger: ACAGACATGACCAGAGCAGCAGGAACCAAAGGGAGA...CTCCAGAGGGTCTCTGTCCCCTCTTGCTGGTGGGGCAAGGGTCTGCGCATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp TCATGGGACACGTTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCACTGGGCGGCCGTGGTaGCGTGGGACCATGGACCTC +
Preference number: 4 (lower is better)
Translates to: SWDTFKWKEVNVGDTVKATGRPW*RGTMDL
Trigger: GAGGTCCATGGTCCCACGGCACCACGGCCGCCCAGT...GGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAACGTGTCCCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp TCATGGGACACGTTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGGCTAGGGCCCCGTaGCTACCCGGTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: SWDTFKWKEVNVGDTVKASARAP*LPGARG
Trigger: TCCACGTGCACCGGGTAGCCACGGGGCCCTAGCCGA...GGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAACGTGTCCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACACGCGGCCTGTGGCACTaGGCTTGCGTCTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATRGLWH*ACVCGS
Trigger: AGAGCCACAGACGCAAGCCCAGTGCCACAGGCCGCG...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CCA 90 bp ACAAATGTAAGACACGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGAGGGCGCCGGGGCCTTaGACCGCTCTGCGTCCCATG +
Preference number: 4 (lower is better)
Translates to: TNVRHGRLCQKQLLYQCRRAPGP*TALRPM
Trigger: CATGGGACGCAGAGCGGTCCAAGGCCCCGGCGCCCT...CCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCGTGTCTTACATTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CCA 90 bp TCATGGGACACGTTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCCCAGGAGTCTATTTGTaGGAGCCGGGCGGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SWDTFKWKEVNVGDTVKAPGVYL*EPGGPP
Trigger: CGGCGGCCCGCCCGGCTCCCACAAATAGACTCCTGG...GGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAACGTGTCCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR CCA 90 bp AGGACCGCAGAGCGGGCCCTTCAGGCCACTTCAGGGCCACTGAGGTGGAGGATTTTGTCCGAACTCCTATaGGACAGCTCCAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: RTAERALQATSGPLRWRILSELL*DSSSCI
Trigger: AATACAGCTGGAGCTGTCCCATAGGAGTTCGGACAA...AATCCTCCACCTCAGTGGCCCTGAAGTGGCCTGAAGGGCCCGCTCTGCGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp TCATGGGACACGTTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCCTCAGAGGGCACTGGTaGCAGGACCGCAGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SWDTFKWKEVNVGDTVKALRGHW*QDRRAG
Trigger: GCCCGCTCTGCGGTCCTGCCACCAGTGCCCTCTGAG...GGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAACGTGTCCCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp GGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCTTGACAGTAGCTAATGAAAACTCAGTGTaGAGGCGAGTGCACTGGGCG +
Preference number: 4 (lower is better)
Translates to: GSTLTRRERQHLVGLTVANENSV*RRVHWA
Trigger: CGCCCAGTGCACTCGCCTCCACACTGAGTTTTCATT...AGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACTCATACTTCTGGAGCTaGGACCAGAAGCCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: VNVGDTVKASNGELLPADSYFWS*DQKPGF
Trigger: GAACCCGGGCTTCTGGTCTCAGCTCCAGAAGTATGA...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR TCA 90 bp CGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCATGTGGGTGACACTGTaGAGGCCTCGAATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RQALPETASVSVQGHPSSMWVTL*RPRMGS
Trigger: GCTCCCCATTCGAGGCCTTCACAGTGTCACCCACAT...GGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR GCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCGGCCTTGGACCGCTCTaGGTCCCATGTTCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: KWKEVNVGDTVKASNGELGLGPL*VPCSLS
Trigger: GGACAGAGAACATGGGACGCAGAGCGGTCCAAGGCC...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR GCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCGCCCGCCGAAGAGTCTaGTTTTGGGCCCTGAGGATC +
Preference number: 4 (lower is better)
Translates to: KWKEVNVGDTVKASNGELARRRV*FWALRI
Trigger: GATCCTCAGGGCCCAAAAGCAGACTCTTCGGCGGGC...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR CCA 90 bp ACAAATGTAAGACACGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGTTGGGGCCGGGGCATaGCGGGAGGTTTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TNVRHGRLCQKQLLYQCRVGAGA*REVWAS
Trigger: TGAGGCCCAAACCTCCCGCCATGCCCCGGCCCCAAC...CCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCGTGTCTTACATTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CCA 90 bp CTTGACAGTAGCTATGTGACCTTAAGTTGGGGTGCAATGTTGGTGAAACAGAGACCGGGACAGGGGGCTTaGGTCTCGTTGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LDSSYVTLSWGAMLVKQRPGQGA*VSLGPG
Trigger: CCCCGGCCCCAACGAGACCCAAGCCCCCTGTCCCGG...TCTCTGTTTCACCAACATTGCACCCCAACTTAAGGTCACATAGCTACTGTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp TTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTTCTGCCGGTCCCATaGCGCCCGCCGAAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: FKWKEVNVGDTVKASNGELLPVP*RPPKSL
Trigger: CAGACTCTTCGGCGGGCGCCATGGGACCGGCAGAAG...CTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR CCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCGCGCTCTTCACCATCTaGAAGGCCTTCGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KWKEVNVGDTVKASNGELALFTI*KAFARL
Trigger: CAGCCTGGCGAAGGCCTTCCAGATGGTGAAGAGCGC...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR TCA 90 bp CTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCAGGCAGCATGTGGGTGACACTGTaGAGGCCTCGAATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LCQKQLLYQCRDILPPGSMWVTL*RPRMGS
Trigger: GCTCCCCATTCGAGGCCTTCACAGTGTCACCCACAT...GCTGCCTGGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR GCA 90 bp TCATGGGACACGTTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCACGTGGACGGCGGGCTaGGTGGTTCCCGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SWDTFKWKEVNVGDTVKATWTAG*VVPVSS
Trigger: TGAAGACACGGGAACCACGCAGCCCGCCGTCCACGT...GGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAACGTGTCCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR GCA 90 bp GGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCTTGACAGTAGCTAGGTGTCATTTATGGTaGAACACCTTCCATCCGAGC +
Preference number: 4 (lower is better)
Translates to: GSTLTRRERQHLVGLTVARCHLW*NTFHPS
Trigger: GCTCGGATGGAAGGTGTTGCACCATAAATGACACCT...AGCTACTGTCAAGCCAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCGAGACCCTCTGGAGCTaGATTTCCGGAAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: KWKEVNVGDTVKASNGELETLWS*ISGRWG
Trigger: GCCCCATCTTCCGGAAATGCAGCTCCAGAGGGTCTC...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp CTTGACAGTAGCTATGTGACCTTAAGTTGGGGTGCAATGTTGGTGAAACAGAGAGGGCTTGGGTCTCGTTaGGGCCGGGGCATGGCGGGA +
Preference number: 4 (lower is better)
Translates to: LDSSYVTLSWGAMLVKQRGLGSR*GRGMAG
Trigger: TCCCGCCATGCCCCGGCCCCAACGAGACCCAAGCCC...TCTCTGTTTCACCAACATTGCACCCCAACTTAAGGTCACATAGCTACTGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp TCATGGGACACGTTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCCCTGAGGATCTATTTTaGGGGCTCAGGCGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: SWDTFKWKEVNVGDTVKAPEDLF*GLRRPP
Trigger: GGGCGGGCGCCTGAGCCCCCAAAATAGATCCTCAGG...GGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAACGTGTCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR CCA 90 bp CGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCTGTGAAGGCCTCGAATaGGGAGCTCCTTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RQALPETASVSVQGHPSSCEGLE*GAPSCR
Trigger: TCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACA...GGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR CCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACAGGACGGAGCAGATGGTaGTGCAGGGGTCCATGTGGT +
Preference number: 4 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATGRSRW*CRGPCG
Trigger: ACCACATGGACCCCTGCACCACCATCTGCTCCGTCC...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp GTGCTATGGAATAAAAAGTATGGTGACATTTGGTACCTGAAAGAGGATTCCAGCGGCCGCGGTGCCGCATaGGGTACGCGGTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: VLWNKKYGDIWYLKEDSSGRGAA*GTRCRR
Trigger: CCGTCTGCACCGCGTACCTCATGCGGCACCGCGGCC...GCTGGAATCCTCTTTCAGGTACCAAATGTCACCATACTTTTTATTCCATAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp GGAACACAAAACTGTTATGACAAGATTCATGGGACACGTTTAAGTGGAAAGAGGCCCGTGGCTACCCGGTaGACGTGGACGGCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GTQNCYDKIHGTRLSGKRPVATR*TWTAGC
Trigger: GCAGCCCGCCGTCCACGTGCACCGGGTAGCCACGGG...CCTCTTTCCACTTAAACGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR GCA 90 bp ACAAATGTAAGACACGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGGCTGCGGCCGTTCTTaGAGTAGACTAGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TNVRHGRLCQKQLLYQCRGCGRS*SRLGRR
Trigger: GCGCCTGCCTAGTCTACTGCAAGAACGGCCGCAGCC...CCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCGTGTCTTACATTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR GCA 90 bp AAGAGAGAAAGAAAAAGGATGTCCGTAATTGTCCGAACTCCTATGGGACAGCTCAGGCTGAGGCCGCGGTaGCGCATGAGGTACGCGGTG +
Preference number: 4 (lower is better)
Translates to: KRERKRMSVIVRTPMGQLRLRPR*RMRYAV
Trigger: CACCGCGTACCTCATGCGGCACCGCGGCCTCAGCCT...GAGCTGTCCCATAGGAGTTCGGACAATTACGGACATCCTTTTTCTTTCTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACATGGGGAGCTCCTTCCTaGAGACACAGTCCCGATGTG +
Preference number: 4 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATWGAPS*RHSPDV
Trigger: CACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCA...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR CCA 90 bp AAGAGAGAAAGAAAAAGGATGTCCGTAATTGTCCGAACTCCTATGGGACAGCTCGTTGGGGCCGGGGCATaGCGGGAGGTTTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KRERKRMSVIVRTPMGQLVGAGA*REVWAS
Trigger: TGAGGCCCAAACCTCCCGCCATGCCCCGGCCCCAAC...GAGCTGTCCCATAGGAGTTCGGACAATTACGGACATCCTTTTTCTTTCTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp GGAACACAAAACTGTTATGACAAGATTCATGGGACACGTTTAAGTGGAAAGAGGCCGGGACAGGGGGCTTaGGTCTCGTTGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GTQNCYDKIHGTRLSGKRPGQGA*VSLGPG
Trigger: CCCCGGCCCCAACGAGACCCAAGCCCCCTGTCCCGG...CCTCTTTCCACTTAAACGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR CCA 90 bp TTATGGTGCAACACCTTCCATCCGAGCCCTGATATTTTAATTACCCCAGTTTATCGCGGGCCGGGCTGCTaGCGGGAGACGTTGACGCAC +
Preference number: 4 (lower is better)
Translates to: LWCNTFHPSPDILITPVYRGPGC*RETLTH
Trigger: GTGCGTCAACGTCTCCCGCCAGCAGCCCGGCCCGCG...ATAAACTGGGGTAATTAAAATATCAGGGCTCGGATGGAAGGTGTTGCACCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp TTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGGCGCTCTTCACCATCTaGAAGGCCTTCGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FKWKEVNVGDTVKASNGEALFTI*KAFARL
Trigger: CAGCCTGGCGAAGGCCTTCCAGATGGTGAAGAGCGC...CTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR CCA 90 bp GTGGTGGCTTATGGGGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGTGCATTTCCGGAAGATaGGGCTTAACTGGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: VVAYGVPPSHGGRGSTLLCISGR*GLTGKN
Trigger: ATTTTTCCCAGTTAAGCCCCATCTTCCGGAAATGCA...CAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACCCCATAAGCCACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp TCATGGGACACGTTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTGTGGCTTCAGCAGCTaGTGGGCAGGAGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SWDTFKWKEVNVGDTVKACGFSS*WAGGSA
Trigger: AGCAGAGCCTCCTGCCCACCAGCTGCTGAAGCCACA...GGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAACGTGTCCCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACATCATACTTCTGGAGCTaGGACCAGAAGCCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATSYFWS*DQKPGF
Trigger: GAACCCGGGCTTCTGGTCTCAGCTCCAGAAGTATGA...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR TCA 90 bp CTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCAGGCAGCAGAGGTGAATGTGGGTaGCACTGTGAAGGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: LCQKQLLYQCRDILPPGSRGECG*HCEGLE
Trigger: TTCGAGGCCTTCACAGTGTCACCCACATTCACCTCT...GCTGCCTGGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR TCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCAGAGGTGAATGTGGGTaGCACTGTGAAGGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: KWKEVNVGDTVKASNGELRGECG*HCEGLE
Trigger: TTCGAGGCCTTCACAGTGTCACCCACATTCACCTCT...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR TCA 90 bp TCTGATGCGCAGACCCTTGCCCCACCAGCAAGAGGGGACAGAGACCCTCTGGAGAACACAAAACTGTTATaGCAAGATTCATGGGACACG +
Preference number: 4 (lower is better)
Translates to: SDAQTLAPPARGDRDPLENTKLL*QDSWDT
Trigger: CGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTT...CTCCAGAGGGTCTCTGTCCCCTCTTGCTGGTGGGGCAAGGGTCTGCGCATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACAGACACGGCAGGCTTTaGCAGAAACAGCTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: VNVGDTVKASNGELLPADRHGRL*QKQLLY
Trigger: ATACAGAAGCTGTTTCTGGCAAAGCCTGCCGTGTCT...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR GCA 90 bp TCTGATGCGCAGACCCTTGCCCCACCAGCAAGAGGGGACAGAGACCCTCTGGAGCTTGAGAGAAATTTCTaGAACCCACAGTCAGCAATT +
Preference number: 4 (lower is better)
Translates to: SDAQTLAPPARGDRDPLELERNF*NPQSAI
Trigger: AATTGCTGACTGTGGGTTGCAGAAATTTCTCTCAAG...CTCCAGAGGGTCTCTGTCCCCTCTTGCTGGTGGGGCAAGGGTCTGCGCATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp AAGAGAGAAAGAAAAAGGATGTCCGTAATTGTCCGAACTCCTATGGGACAGCTCCTTCTGCCGGTCCCATaGCGCCCGCCGAAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: KRERKRMSVIVRTPMGQLLLPVP*RPPKSL
Trigger: CAGACTCTTCGGCGGGCGCCATGGGACCGGCAGAAG...GAGCTGTCCCATAGGAGTTCGGACAATTACGGACATCCTTTTTCTTTCTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp GGAACACAAAACTGTTATGACAAGATTCATGGGACACGTTTAAGTGGAAAGAGGGACGCGCACCAACGGTaGAGGTACGGGCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: GTQNCYDKIHGTRLSGKRDAHQR*RYGRGG
Trigger: GCCGCCTCGCCCGTACCTCCACCGTTGGTGCGCGTC...CCTCTTTCCACTTAAACGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR CCA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACAAAATTAGCCGGGTCTaGTGTCACACACCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: VNVGDTVKASNGELLPADKISRV*CHTPVV
Trigger: GACTACAGGTGTGTGACACCAGACCCGGCTAATTTT...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp AAGAGAGAAAGAAAAAGGATGTCCGTAATTGTCCGAACTCCTATGGGACAGCTCGACCTCAGAGGGCACTaGTGGCAGGACCGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: KRERKRMSVIVRTPMGQLDLRGH*WQDRRA
Trigger: CGCTCTGCGGTCCTGCCACCAGTGCCCTCTGAGGTC...GAGCTGTCCCATAGGAGTTCGGACAATTACGGACATCCTTTTTCTTTCTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp TTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGAGAGGACGGAGCAGATaGTGGTGCAGGGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: FKWKEVNVGDTVKASNGERGRSR*WCRGPC
Trigger: ACATGGACCCCTGCACCACCATCTGCTCCGTCCTCT...CTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp GTGGTGGCTTATGGGGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGTATGTGACCTTAAGTTaGGGTGCAATGTTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: VVAYGVPPSHGGRGSTLLYVTLS*GAMLVK
Trigger: TTTCACCAACATTGCACCCCAACTTAAGGTCACATA...CAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACCCCATAAGCCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp GGAACACAAAACTGTTATGACAAGATTCATGGGACACGTTTAAGTGGAAAGAGGGCTCCCGAGGAAGAGTaGGGGCGCGACGCGCACCAA +
Preference number: 4 (lower is better)
Translates to: GTQNCYDKIHGTRLSGKRAPEEE*GRDAHQ
Trigger: TTGGTGCGCGTCGCGCCCTCACTCTTCCTCGGGAGC...CCTCTTTCCACTTAAACGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR TCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACAAGAGGTGAATGTGGGTaGCACTGTGAAGGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATRGECG*HCEGLE
Trigger: TTCGAGGCCTTCACAGTGTCACCCACATTCACCTCT...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR GCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCAGCTTCTGTATCAGTaGAGGGACATCCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KWKEVNVGDTVKASNGELQLLYQ*RDILPP
Trigger: TGGAGGAAGGATGTCCCTGCACTGATACAGAAGCTG...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR GCA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACCCCAATCACCCAAGTTaGCCTTCAACAATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VNVGDTVKASNGELLPADPNHPS*PSTMSS
Trigger: TGAAGACATTGTTGAAGGGCAACTTGGGTGATTGGG...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCAGACACGGCAGGCTTTaGCAGAAACAGCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: KWKEVNVGDTVKASNGELRHGRL*QKQLKC
Trigger: GCATTTCAGCTGTTTCTGGCAAAGCCTGCCGTGTCT...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp TTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGGCTTCCCATGTTCGGTaGCCAGATGAGACCAGTGAG +
Preference number: 4 (lower is better)
Translates to: FKWKEVNVGDTVKASNGEASHVR*PDETSE
Trigger: CTCACTGGTCTCATCTGGGCACCGAACATGGGAAGC...CTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp GGAACACAAAACTGTTATGACAAGATTCATGGGACACGTTTAAGTGGAAAGAGGGCTACCCGGTGCACGTaGACGGCGGGCTGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: GTQNCYDKIHGTRLSGKRATRCT*TAGCVV
Trigger: AACCACGCAGCCCGCCGTCCACGTGCACCGGGTAGC...CCTCTTTCCACTTAAACGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CCA 90 bp TCATGGGACACGTTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCGGGACAGAGACCCTCTaGAGCTGCATTTCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: SWDTFKWKEVNVGDTVKAGTETL*SCISGR
Trigger: TCTTCCGGAAATGCAGCTCCAGAGGGTCTCTGTCCC...GGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAACGTGTCCCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp ACAAATGTAAGACACGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGTCATACTTCTGGAGCTaGGACCAGAAGCCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: TNVRHGRLCQKQLLYQCRSYFWS*DQKPGF
Trigger: GAACCCGGGCTTCTGGTCTCAGCTCCAGAAGTATGA...CCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCGTGTCTTACATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR CCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACAGAGGCAGCACCTTGTTaGCTTGACAGTAGCTATGTG +
Preference number: 4 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATEAAPC*LDSSYV
Trigger: CACATAGCTACTGTCAAGCCAACAAGGTGCTGCCTC...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACAACACAAAACTGTTATaGCAAGATTCATGGGACACG +
Preference number: 4 (lower is better)
Translates to: VNVGDTVKASNGELLPADNTKLL*QDSWDT
Trigger: CGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTT...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR GCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACAGAGAAGGAATCAACATaGTTGGATGCCTCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATEKEST*LDASSG
Trigger: ACCACTGGAGGCATCCAAGCATGTTGATTCCTTCTC...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCGAAGAGTCTGCTTTTaGGCCCTGAGGATCTATTTT +
Preference number: 4 (lower is better)
Translates to: KWKEVNVGDTVKASNGELRRVCF*ALRIYF
Trigger: AAAATAGATCCTCAGGGCCCAAAAGCAGACTCTTCG...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR CCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACATGCAGGTGTCATTTATaGTGCAACACCTTCCATCCG +
Preference number: 4 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATCRCHL*CNTFHP
Trigger: CGGATGGAAGGTGTTGCACCATAAATGACACCTGCA...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp GTGCTATGGAATAAAAAGTATGGTGACATTTGGTACCTGAAAGAGGATTCCAGCGGTGCCGTGGGACCATaGACCTCAGAGGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: VLWNKKYGDIWYLKEDSSGAVGP*TSEGTG
Trigger: ACCAGTGCCCTCTGAGGTCCATGGTCCCACGGCACC...GCTGGAATCCTCTTTCAGGTACCAAATGTCACCATACTTTTTATTCCATAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp CTTGACAGTAGCTATGTGACCTTAAGTTGGGGTGCAATGTTGGTGAAACAGAGATCCAGTGGTGGCTTATaGGGTTCCACCCTCACACGG +
Preference number: 4 (lower is better)
Translates to: LDSSYVTLSWGAMLVKQRSSGGL*GSTLTR
Trigger: CCGTGTGAGGGTGGAACCCCATAAGCCACCACTGGA...TCTCTGTTTCACCAACATTGCACCCCAACTTAAGGTCACATAGCTACTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp CTTGACAGTAGCTATGTGACCTTAAGTTGGGGTGCAATGTTGGTGAAACAGAGAGGATGCCTCCAGTGGTaGCTTATGGGGTTCCACCCT +
Preference number: 4 (lower is better)
Translates to: LDSSYVTLSWGAMLVKQRGCLQW*LMGFHP
Trigger: AGGGTGGAACCCCATAAGCCACCACTGGAGGCATCC...TCTCTGTTTCACCAACATTGCACCCCAACTTAAGGTCACATAGCTACTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp TTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGGGGGTGCAATGTTGGTaGAACAGAGATCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: FKWKEVNVGDTVKASNGEGVQCW*NRDQSR
Trigger: CCTACTTTGATCTCTGTTTCACCAACATTGCACCCC...CTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp TCATGGGACACGTTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCAGGAGAGGTGGTGTCTaGACTAGAGAAGGAATCAAC +
Preference number: 4 (lower is better)
Translates to: SWDTFKWKEVNVGDTVKARRGGV*TREGIN
Trigger: GTTGATTCCTTCTCTAGTTCAGACACCACCTCTCCT...GGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAACGTGTCCCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp TCATGGGACACGTTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCCCTTTCCCTAGTGACTaGGTTGTCGGCTTTACGTTT +
Preference number: 4 (lower is better)
Translates to: SWDTFKWKEVNVGDTVKAPFPSD*VVGFTF
Trigger: AAACGTAAAGCCGACAACGCAGTCACTAGGGAAAGG...GGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAACGTGTCCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR GCA 90 bp TTATGGTGCAACACCTTCCATCCGAGCCCTGATATTTTAATTACCCCAGTTTATGGCCTTGGACCGCTCTaGGTCCCATGTTCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LWCNTFHPSPDILITPVYGLGPL*VPCSLS
Trigger: GGACAGAGAACATGGGACGCAGAGCGGTCCAAGGCC...ATAAACTGGGGTAATTAAAATATCAGGGCTCGGATGGAAGGTGTTGCACCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp ACAAATGTAAGACACGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGCAGCTTCTGTATCAGTaGAGGGACATCCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TNVRHGRLCQKQLLYQCRQLLYQ*RDILPP
Trigger: TGGAGGAAGGATGTCCCTGCACTGATACAGAAGCTG...CCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCGTGTCTTACATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR GCA 90 bp TCATGGGACACGTTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCATCAACATGCTTGGATaGCTCCAGTGGTGGCTTATG +
Preference number: 4 (lower is better)
Translates to: SWDTFKWKEVNVGDTVKAINMLG*LQWWLM
Trigger: CATAAGCCACCACTGGAGGCATCCAAGCATGTTGAT...GGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAACGTGTCCCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp GGAACACAAAACTGTTATGACAAGATTCATGGGACACGTTTAAGTGGAAAGAGGGGGCGGGTCTCCCTTTaGTTCCTGCTGCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GTQNCYDKIHGTRLSGKRGRVSL*FLLLWS
Trigger: TGACCAGAGCAGCAGGAACCAAAGGGAGACCCGCCC...CCTCTTTCCACTTAAACGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp TTATGGTGCAACACCTTCCATCCGAGCCCTGATATTTTAATTACCCCAGTTTATATGTGGGTGACACTGTaGAGGCCTCGAATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LWCNTFHPSPDILITPVYMWVTL*RPRMGS
Trigger: GCTCCCCATTCGAGGCCTTCACAGTGTCACCCACAT...ATAAACTGGGGTAATTAAAATATCAGGGCTCGGATGGAAGGTGTTGCACCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp CTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCAGGCAGCAACACAAAACTGTTATaGCAAGATTCATGGGACACG +
Preference number: 4 (lower is better)
Translates to: LCQKQLLYQCRDILPPGSNTKLL*QDSWDT
Trigger: CGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTT...GCTGCCTGGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR GCA 90 bp TTATGGTGCAACACCTTCCATCCGAGCCCTGATATTTTAATTACCCCAGTTTATTGGGGAGCTCCTTCCTaGAGACACAGTCCCGATGTG +
Preference number: 4 (lower is better)
Translates to: LWCNTFHPSPDILITPVYWGAPS*RHSPDV
Trigger: CACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCA...ATAAACTGGGGTAATTAAAATATCAGGGCTCGGATGGAAGGTGTTGCACCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp CTTGACAGTAGCTATGTGACCTTAAGTTGGGGTGCAATGTTGGTGAAACAGAGACAGCTCCAGCTGTATTaGAGAGGGGCTGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: LDSSYVTLSWGAMLVKQRQLQLY*RGADEE
Trigger: CTCTTCATCAGCCCCTCTGCAATACAGCTGGAGCTG...TCTCTGTTTCACCAACATTGCACCCCAACTTAAGGTCACATAGCTACTGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp AAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCTTTAACAAGTACCACTaGAGGTGTCATTTATGGTGC +
Preference number: 4 (lower is better)
Translates to: KWKEVNVGDTVKASNGELFNKYH*RCHLWC
Trigger: GCACCATAAATGACACCTGCAGTGGTACTTGTTAAA...GAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp TCATGGGACACGTTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTGGGACACGTTTAAGTaGAAAGAGGTGAATGTGGGT +
Preference number: 4 (lower is better)
Translates to: SWDTFKWKEVNVGDTVKAWDTFK*KEVNVG
Trigger: ACCCACATTCACCTCTTTCCACTTAAACGTGTCCCA...GGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAACGTGTCCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR TCA 90 bp TTATGGTGCAACACCTTCCATCCGAGCCCTGATATTTTAATTACCCCAGTTTATGCCTGGGCACCAGAGTaGGACTCCGTCTCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: LWCNTFHPSPDILITPVYAWAPE*DSVSRK
Trigger: TTTTCTTGAGACGGAGTCTCACTCTGGTGCCCAGGC...ATAAACTGGGGTAATTAAAATATCAGGGCTCGGATGGAAGGTGTTGCACCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp TTATGGTGCAACACCTTCCATCCGAGCCCTGATATTTTAATTACCCCAGTTTATCCACTTCAGGGCCACTaGGGTGGAGGATTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: LWCNTFHPSPDILITPVYPLQGH*GGGFSC
Trigger: ACAAGAGAATCCTCCACCTCAGTGGCCCTGAAGTGG...ATAAACTGGGGTAATTAAAATATCAGGGCTCGGATGGAAGGTGTTGCACCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp AAGAGAGAAAGAAAAAGGATGTCCGTAATTGTCCGAACTCCTATGGGACAGCTCGCTTGTTTAATAAGCTaGGCTGACCAGAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KRERKRMSVIVRTPMGQLACLIS*ADQRER
Trigger: CCTCTCCCTCTGGTCAGCTCAGCTTATTAAACAAGC...GAGCTGTCCCATAGGAGTTCGGACAATTACGGACATCCTTTTTCTTTCTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACAAAGTATGGTGACATTTaGTACCTGAAAGAGGATTCC +
Preference number: 4 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATKYGDI*YLKEDS
Trigger: GGAATCCTCTTTCAGGTACCAAATGTCACCATACTT...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp GGAACACAAAACTGTTATGACAAGATTCATGGGACACGTTTAAGTGGAAAGAGGCTTAGAAATGCTCAGTaGATTGGCCGGGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GTQNCYDKIHGTRLSGKRLRNAQ*IGRARW
Trigger: CCACCTCGCCCGGCCAATCCACTGAGCATTTCTAAG...CCTCTTTCCACTTAAACGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp GGAACACAAAACTGTTATGACAAGATTCATGGGACACGTTTAAGTGGAAAGAGGCTTGGATGCCTCCAGTaGTGGCTTATGGGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GTQNCYDKIHGTRLSGKRLGCLQ*WLMGFH
Trigger: GTGGAACCCCATAAGCCACCACTGGAGGCATCCAAG...CCTCTTTCCACTTAAACGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR GCA 90 bp AAGAGAGAAAGAAAAAGGATGTCCGTAATTGTCCGAACTCCTATGGGACAGCTCGCTGCGTGGGAGCCGTaGTATGGAATAAAAAGTATG +
Preference number: 4 (lower is better)
Translates to: KRERKRMSVIVRTPMGQLAAWEP*YGIKSM
Trigger: CATACTTTTTATTCCATAGCACGGCTCCCACGCAGC...GAGCTGTCCCATAGGAGTTCGGACAATTACGGACATCCTTTTTCTTTCTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp GTGCTATGGAATAAAAAGTATGGTGACATTTGGTACCTGAAAGAGGATTCCAGCTTTAATAAGCTGAGCTaGCCAGAGGGAGAGGACGGA +
Preference number: 4 (lower is better)
Translates to: VLWNKKYGDIWYLKEDSSFNKLS*PEGEDG
Trigger: TCCGTCCTCTCCCTCTGGTCAGCTCAGCTTATTAAA...GCTGGAATCCTCTTTCAGGTACCAAATGTCACCATACTTTTTATTCCATAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp CTTGACAGTAGCTATGTGACCTTAAGTTGGGGTGCAATGTTGGTGAAACAGAGAGTGGGAGCCGTGCTATaGAATAAAAAGTATGGTGAC +
Preference number: 4 (lower is better)
Translates to: LDSSYVTLSWGAMLVKQRVGAVL*NKKYGD
Trigger: GTCACCATACTTTTTATTCCATAGCACGGCTCCCAC...TCTCTGTTTCACCAACATTGCACCCCAACTTAAGGTCACATAGCTACTGTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp TTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGAAACACTCAAGATTCTaGAGTGTAAATAATGGAGGA +
Preference number: 4 (lower is better)
Translates to: FKWKEVNVGDTVKASNGEKHSRF*SVNNGG
Trigger: TCCTCCATTATTTACACTCCAGAATCTTGAGTGTTT...CTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR TCA 90 bp GTGCTATGGAATAAAAAGTATGGTGACATTTGGTACCTGAAAGAGGATTCCAGCCTTCCATCCGAGCCCTaGTATTTTAATTACCCCAGT +
Preference number: 4 (lower is better)
Translates to: VLWNKKYGDIWYLKEDSSLPSEP*YFNYPS
Trigger: ACTGGGGTAATTAAAATATCAGGGCTCGGATGGAAG...GCTGGAATCCTCTTTCAGGTACCAAATGTCACCATACTTTTTATTCCATAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp GGAACACAAAACTGTTATGACAAGATTCATGGGACACGTTTAAGTGGAAAGAGGCGAAGAGTCTGCTTTTaGGCCCTGAGGATCTATTTT +
Preference number: 4 (lower is better)
Translates to: GTQNCYDKIHGTRLSGKRRRVCF*ALRIYF
Trigger: AAAATAGATCCTCAGGGCCCAAAAGCAGACTCTTCG...CCTCTTTCCACTTAAACGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR CCA 90 bp AAGAGAGAAAGAAAAAGGATGTCCGTAATTGTCCGAACTCCTATGGGACAGCTCGCCCAGTTTATAAACTaGGATCAAGATGTGCATTAT +
Preference number: 4 (lower is better)
Translates to: KRERKRMSVIVRTPMGQLAQFIN*DQDVHY
Trigger: ATAATGCACATCTTGATCCCAGTTTATAAACTGGGC...GAGCTGTCCCATAGGAGTTCGGACAATTACGGACATCCTTTTTCTTTCTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CCA 90 bp GGAACACAAAACTGTTATGACAAGATTCATGGGACACGTTTAAGTGGAAAGAGGTCTAAATGTCCCACGTaGGTATGCATTTTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: GTQNCYDKIHGTRLSGKRSKCPT*VCIFSN
Trigger: GTTTGAGAAAATGCATACCCACGTGGGACATTTAGA...CCTCTTTCCACTTAAACGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS TCA 90 bp CAGCTGCTCCTCCGCGCCCGCGGCTCGCGCGCTCCCGAGGAAGAGTaGGGGCGCGACGCGCACCAACGGTGGAGGTACGGGCGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: QLLLRARGSRAPEEE*GRDAHQRWRYGRGG
Trigger: GCCGCCTCGCCCGTACCTCCACCGTTGGTGCGCGTCGCGCCCTCACTCTTCCTCGGGAGCGCGCGAGCCGCGGGCGCGGAGGAGCAGCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS CCA 90 bp CTGTGGCTCTTGGGCGCAGCGCCCTGCCCGCTCTACTGCGGCGTCTaGCGCGGAGGCGTGGCTTGGCCGGGCCCGCCCACTTCGCGTCCG +
Preference number: 5 (lower is better)
Translates to: LWLLGAAPCPLYCGV*RGGVAWPGPPTSRP
Trigger: CGGACGCGAAGTGGGCGGGCCCGGCCAAGCCACGCCTCCGCGCCAGACGCCGCAGTAGAGCGGGCAGGGCGCTGCGCCCAAGAGCCACAG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS CCA 90 bp CCCCGCCCCCGCGGCCTGTGGCACTGGGCTTGCGTCTGTGGCTCTTaGGCGCAGCGCCCTGCCCGCTCTACTGCGGCGTCTGGCGCGGAG +
Preference number: 5 (lower is better)
Translates to: PRPRGLWHWACVCGS*AQRPARSTAASGAE
Trigger: CTCCGCGCCAGACGCCGCAGTAGAGCGGGCAGGGCGCTGCGCCCAAGAGCCACAGACGCAAGCCCAGTGCCACAGGCCGCGGGGGCGGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS GCA 90 bp GGCTTGCGTCTGTGGCTCTTGGGCGCAGCGCCCTGCCCGCTCTACTaGGGCGTCTGGCGCGGAGGCGTGGCTTGGCCGGGCCCGCCCACT +
Preference number: 5 (lower is better)
Translates to: GLRLWLLGAAPCPLY*GVWRGGVAWPGPPT
Trigger: AGTGGGCGGGCCCGGCCAAGCCACGCCTCCGCGCCAGACGCCGCAGTAGAGCGGGCAGGGCGCTGCGCCCAAGAGCCACAGACGCAAGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS CCA 90 bp CCGGGCCCGCCCACTTCGCGTCCGCGTCGTTCGGCTAGGGCCCCGTaGCTACCCGGTGCACGTGGACGGCGGGCTGCGTGGTTCCCGTGT +
Preference number: 5 (lower is better)
Translates to: PGPPTSRPRRSARAP*LPGARGRRAAWFPC
Trigger: ACACGGGAACCACGCAGCCCGCCGTCCACGTGCACCGGGTAGCCACGGGGCCCTAGCCGAACGACGCGGACGCGAAGTGGGCGGGCCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS CCA 90 bp CCGTCCTCCCCGCCCCCGCGGCCTGTGGCACTGGGCTTGCGTCTGTaGCTCTTGGGCGCAGCGCCCTGCCCGCTCTACTGCGGCGTCTGG +
Preference number: 5 (lower is better)
Translates to: PSSPPPRPVALGLRL*LLGAAPCPLYCGVW
Trigger: CCAGACGCCGCAGTAGAGCGGGCAGGGCGCTGCGCCCAAGAGCCACAGACGCAAGCCCAGTGCCACAGGCCGCGGGGGCGGGGAGGACGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS GCA 90 bp CCTGTGGCACTGGGCTTGCGTCTGTGGCTCTTGGGCGCAGCGCCCTaGCCGCTCTACTGCGGCGTCTGGCGCGGAGGCGTGGCTTGGCCG +
Preference number: 5 (lower is better)
Translates to: PVALGLRLWLLGAAP*PLYCGVWRGGVAWP
Trigger: CGGCCAAGCCACGCCTCCGCGCCAGACGCCGCAGTAGAGCGGGCAGGGCGCTGCGCCCAAGAGCCACAGACGCAAGCCCAGTGCCACAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS GCA 90 bp CAACGGTGGAGGTACGGGCGAGGCGGCCCCGCGGCGCCCAGCTTCTaGCGGTCCCATGGCGCCCGCCGAAGAGTCTGCTTTTGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: QRWRYGRGGPAAPSF*RSHGARRRVCFWAL
Trigger: CAGGGCCCAAAAGCAGACTCTTCGGCGGGCGCCATGGGACCGGCAGAAGCTGGGCGCCGCGGGGCCGCCTCGCCCGTACCTCCACCGTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS CCA 90 bp GTACGGGCGAGGCGGCCCCGCGGCGCCCAGCTTCTGCCGGTCCCATaGCGCCCGCCGAAGAGTCTGCTTTTGGGCCCTGAGGATCTATTT +
Preference number: 5 (lower is better)
Translates to: VRARRPRGAQLLPVP*RPPKSLLLGPEDLF
Trigger: AAATAGATCCTCAGGGCCCAAAAGCAGACTCTTCGGCGGGCGCCATGGGACCGGCAGAAGCTGGGCGCCGCGGGGCCGCCTCGCCCGTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR CAA 90 bp GTGGTGGCTTATGGGGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGGCCGGGACAGGGGGCTaGGGTCTCGTTGGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: VVAYGVPPSHGGRGSTLLAGTGG*GLVGAG
Trigger: CCCGGCCCCAACGAGACCCAAGCCCCCTGTCCCGGC...CAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACCCCATAAGCCACCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS CCA 90 bp GCTAGGGCCCCGTGGCTACCCGGTGCACGTGGACGGCGGGCTGCGTaGTTCCCGTGTCTTCACCCTTTCCCTAGTGACTGCGTTGTCGGC +
Preference number: 5 (lower is better)
Translates to: ARAPWLPGARGRRAA*FPCLHPFPSDCVVG
Trigger: GCCGACAACGCAGTCACTAGGGAAAGGGTGAAGACACGGGAACCACGCAGCCCGCCGTCCACGTGCACCGGGTAGCCACGGGGCCCTAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CAA 90 bp GTGGTGGCTTATGGGGTTCCACCCTCACACGGCGGGAGAGGCAGCACCTTGTTGCAGGGCGCCGGGGCCTaGGACCGCTCTGCGTCCCAT +
Preference number: 5 (lower is better)
Translates to: VVAYGVPPSHGGRGSTLLQGAGA*DRSASH
Trigger: ATGGGACGCAGAGCGGTCCAAGGCCCCGGCGCCCTG...CAACAAGGTGCTGCCTCTCCCGCCGTGTGAGGGTGGAACCCCATAAGCCACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CAA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACCAGGGCGCCGGGGCCTaGGACCGCTCTGCGTCCCAT +
Preference number: 5 (lower is better)
Translates to: VNVGDTVKASNGELLPADQGAGA*DRSASH
Trigger: ATGGGACGCAGAGCGGTCCAAGGCCCCGGCGCCCTG...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR CAA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACGGCATGGCGGGAGGTTaGGGCCTCACCAGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: VNVGDTVKASNGELLPADGMAGG*GLTRAP
Trigger: CGGCGCCCTGGTGAGGCCCAAACCTCCCGCCATGCC...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR CAA 90 bp CGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCGCCGGGACAGGGGGCTaGGGTCTCGTTGGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: RQALPETASVSVQGHPSSAGTGG*GLVGAG
Trigger: CCCGGCCCCAACGAGACCCAAGCCCCCTGTCCCGGC...GGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CAA 90 bp TCTGATGCGCAGACCCTTGCCCCACCAGCAAGAGGGGACAGAGACCCTCTGGAGCTGATGCGCAGACCCTaGCCCCACCAGCAAGAGGGG +
Preference number: 5 (lower is better)
Translates to: SDAQTLAPPARGDRDPLELMRRP*PHQQEG
Trigger: CCCCTCTTGCTGGTGGGGCAAGGGTCTGCGCATCAG...CTCCAGAGGGTCTCTGTCCCCTCTTGCTGGTGGGGCAAGGGTCTGCGCATCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CAA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACCGCCCAGGAGTCTATTaGTGGGAGCCGGGCGGGCCG +
Preference number: 5 (lower is better)
Translates to: VNVGDTVKASNGELLPADRPGVY*WEPGGP
Trigger: CGGCCCGCCCGGCTCCCACAAATAGACTCCTGGGCG...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS GCA 90 bp CTCCTCATACTTCTGGAGCTGAGACCAGAAGCCCGGGTTCGGTTCTaGTACCGGGCGAGCGCTCTTCACCATCTGGAAGGCCTTCGCCAG +
Preference number: 5 (lower is better)
Translates to: LLILLELRPEARVRF*YRASALHHLEGLRQ
Trigger: CTGGCGAAGGCCTTCCAGATGGTGAAGAGCGCTCGCCCGGTAGCAGAACCGAACCCGGGCTTCTGGTCTCAGCTCCAGAAGTATGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS-3UTR CAA 90 bp CTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCAGGCAGCTTGCGTCTGTGGCTCTaGGGCGCAGCGCCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: LCQKQLLYQCRDILPPGSLRLWL*GAAPCP
Trigger: CGGGCAGGGCGCTGCGCCCAAGAGCCACAGACGCAA...GCTGCCTGGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CAA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACACGCCCAGGAGTCTATTaGTGGGAGCCGGGCGGGCCG +
Preference number: 5 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATRPGVY*WEPGGP
Trigger: CGGCCCGCCCGGCTCCCACAAATAGACTCCTGGGCG...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS-3UTR CAA 90 bp AAAACTCAGTGTGGAGGCGAGTGCACTGGGCGGCCGTGGTGCCGTGGGACCATGGGGCCTGACTGGGTCTaGTTAAGAGATACACAGCTT +
Preference number: 5 (lower is better)
Translates to: KTQCGGECTGRPWCRGTMGPDWV*LRDTQL
Trigger: AAGCTGTGTATCTCTTAACAAGACCCAGTCAGGCCC...CATGGTCCCACGGCACCACGGCCGCCCAGTGCACTCGCCTCCACACTGAGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CAA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACACCTGTGGCACTGGGCTaGCGTCTGTGGCTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATPVALG*RLWLLG
Trigger: GCCCAAGAGCCACAGACGCAAGCCCAGTGCCACAGG...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CAA 90 bp CTTGACAGTAGCTATGTGACCTTAAGTTGGGGTGCAATGTTGGTGAAACAGAGAGGCATGGCGGGAGGTTaGGGCCTCACCAGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: LDSSYVTLSWGAMLVKQRGMAGG*GLTRAP
Trigger: CGGCGCCCTGGTGAGGCCCAAACCTCCCGCCATGCC...TCTCTGTTTCACCAACATTGCACCCCAACTTAAGGTCACATAGCTACTGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CAA 90 bp TTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGTGCTGGCGGGAGACGTaGACGCACAGCGTGACTCCC +
Preference number: 5 (lower is better)
Translates to: FKWKEVNVGDTVKASNGECWRET*THSVTP
Trigger: GGGAGTCACGCTGTGCGTCAACGTCTCCCGCCAGCA...CTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS GCA 90 bp CGGCGGGCTGCGTGGTTCCCGTGTCTTCACCCTTTCCCTAGTGACTaGGTTGTCGGCTTTACGTTTATTCCTTTTTGTGGCCCGCTTTGT +
Preference number: 5 (lower is better)
Translates to: RRAAWFPCLHPFPSD*VVGFTFIPFCGPLC
Trigger: ACAAAGCGGGCCACAAAAAGGAATAAACGTAAAGCCGACAACGCAGTCACTAGGGAAAGGGTGAAGACACGGGAACCACGCAGCCCGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CAA 90 bp ACAAATGTAAGACACGGCAGGCTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGTGCTGGCGGGAGACGTaGACGCACAGCGTGACTCCC +
Preference number: 5 (lower is better)
Translates to: TNVRHGRLCQKQLLYQCRCWRET*THSVTP
Trigger: GGGAGTCACGCTGTGCGTCAACGTCTCCCGCCAGCA...CCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCGTGTCTTACATTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR CAA 90 bp GTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGCTCCTTCCTGCAGACAAGACACGGCAGGCTTaGCCAGAAACAGCTGAAATG +
Preference number: 5 (lower is better)
Translates to: VNVGDTVKASNGELLPADKTRQA*PETAEM
Trigger: CATTTCAGCTGTTTCTGGCAAAGCCTGCCGTGTCTT...GTCTGCAGGAAGGAGCTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CAA 90 bp CTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCAGGCAGCAAGACACGGCAGGCTTaGCCAGAAACAGCTTCTGTA +
Preference number: 5 (lower is better)
Translates to: LCQKQLLYQCRDILPPGSKTRQA*PETASV
Trigger: TACAGAAGCTGTTTCTGGCAAAGCCTGCCGTGTCTT...GCTGCCTGGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR CAA 90 bp CTTTGCCAGAAACAGCTTCTGTATCAGTGCAGGGACATCCTTCCTCCAGGCAGCTCCCTAGTGACTGCGTaGTCGGCTTTACGTTTATTC +
Preference number: 5 (lower is better)
Translates to: LCQKQLLYQCRDILPPGSSLVTA*SALRLF
Trigger: GAATAAACGTAAAGCCGACAACGCAGTCACTAGGGA...GCTGCCTGGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS-3UTR CAA 90 bp TTTAAGTGGAAAGAGGTGAATGTGGGTGACACTGTGAAGGCCTCGAATGGGGAGAAGACACGGCAGGCTTaGCCAGAAACAGCTTCTGTA +
Preference number: 5 (lower is better)
Translates to: FKWKEVNVGDTVKASNGEKTRQA*PETASV
Trigger: TACAGAAGCTGTTTCTGGCAAAGCCTGCCGTGTCTT...CTCCCCATTCGAGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000438823.1
CDS-3UTR CAA 90 bp CTTGACAGTAGCTATGTGACCTTAAGTTGGGGTGCAATGTTGGTGAAACAGAGAAGGCAGGAGAATCACTaGAACCAGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: LDSSYVTLSWGAMLVKQRRQENH*NQGGGG
Trigger: ACCTCCGCCTCCCTGGTTCAAGTGATTCTCCTGCCT...TCTCTGTTTCACCAACATTGCACCCCAACTTAAGGTCACATAGCTACTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CAA 90 bp GGAACACAAAACTGTTATGACAAGATTCATGGGACACGTTTAAGTGGAAAGAGGGAAATGCTCAGTGGATaGGCCGGGCGAGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: GTQNCYDKIHGTRLSGKREMLSG*AGRGGS
Trigger: TGAGCCACCTCGCCCGGCCAATCCACTGAGCATTTC...CCTCTTTCCACTTAAACGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CAA 90 bp CGAATGGGGAGCTCCTTCCTGCAGACACAGTCCCGATGTGTTCATATAGCAACACTATGTGACCTTAAGTaGGGGTGCAATGTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: RMGSSFLQTQSRCVHIATLCDLK*GCNVGE
Trigger: TTCACCAACATTGCACCCCAACTTAAGGTCACATAG...TGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS-3UTR CAA 90 bp GTGCTATGGAATAAAAAGTATGGTGACATTTGGTACCTGAAAGAGGATTCCAGCAAGGAATCAACATGCTaGGATGCCTCCAGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: VLWNKKYGDIWYLKEDSSKESTC*DASSGG
Trigger: GCCACCACTGGAGGCATCCAAGCATGTTGATTCCTT...GCTGGAATCCTCTTTCAGGTACCAAATGTCACCATACTTTTTATTCCATAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405954.2
CDS CAA 90 bp TCTGCCACGCCGGGCGCGCGCGGGCCGGGCTGCTGGCGGGAGACGTaGACGCACAGCGTGACTCCCGCGCGCGCCAGCTGCTCCTCCGCG +
Preference number: 6 (lower is better)
Translates to: SATPGARGPGCWRET*THSVTPARASCSSA
Trigger: CGCGGAGGAGCAGCTGGCGCGCGCGGGAGTCACGCTGTGCGTCAACGTCTCCCGCCAGCAGCCCGGCCCGCGCGCGCCCGGCGTGGCAGA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS CCA 72 bp CCCCCGGGTCCTAGAGGCCTCCGAGGTGGACCAGGCTaGGGCTTGGGTCCCCCGCGGGCGCTGGGCCGGGAC +
Preference number: 6 (lower is better)
Translates to: PPGPRGLRGGPG*GLGPPRALGRD
Trigger: GTCCCGGCCCAGCGCCCGCGGGGGACCCAAGCCCCAGCCTGGTCCACCTCGGAGGCCTCTAGGACCCGGGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS GCA 72 bp CGCAGCTCTGCCACGCCGGGCGCGCGCGGGCCGGGCTaGTGGCGGGAGACGTTGACGCACAGCGTGACTCCC +
Preference number: 6 (lower is better)
Translates to: RSSATPGARGPG*WRETLTHSVTP
Trigger: GGGAGTCACGCTGTGCGTCAACGTCTCCCGCCAGCAGCCCGGCCCGCGCGCGCCCGGCGTGGCAGAGCTGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS CCA 72 bp TTGGGCGCAGCGCCCTGCCCGCTCTACTGCGGCGTCTaGCGCGGAGGCGTGGCTTGGCCGGGCCCGCCCACT +
Preference number: 6 (lower is better)
Translates to: LGAAPCPLYCGV*RGGVAWPGPPT
Trigger: AGTGGGCGGGCCCGGCCAAGCCACGCCTCCGCGCCAGACGCCGCAGTAGAGCGGGCAGGGCGCTGCGCCCAA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS CCA 72 bp TTTGGGGGCTCAGGCGCCCGCCCAGGAGTCTATTTGTaGGAGCCGGGCGGGCCGCCGGGCGCCCCCGGGTCC +
Preference number: 6 (lower is better)
Translates to: FGGSGARPGVYL*EPGGPPGAPGS
Trigger: GGACCCGGGGGCGCCCGGCGGCCCGCCCGGCTCCCACAAATAGACTCCTGGGCGGGCGCCTGAGCCCCCAAA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS CAA 72 bp CCGTCCTCCCCGCCCCCGCGGCCTGTGGCACTGGGCTaGCGTCTGTGGCTCTTGGGCGCAGCGCCCTGCCCG +
Preference number: 6 (lower is better)
Translates to: PSSPPPRPVALG*RLWLLGAAPCP
Trigger: CGGGCAGGGCGCTGCGCCCAAGAGCCACAGACGCAAGCCCAGTGCCACAGGCCGCGGGGGCGGGGAGGACGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS CAA 72 bp GGTCCTAGAGGCCTCCGAGGTGGACCAGGCTGGGGCTaGGGTCCCCCGCGGGCGCTGGGCCGGGACAGGGGG +
Preference number: 6 (lower is better)
Translates to: GPRGLRGGPGWG*GPPRALGRDRG
Trigger: CCCCCTGTCCCGGCCCAGCGCCCGCGGGGGACCCAAGCCCCAGCCTGGTCCACCTCGGAGGCCTCTAGGACC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS CAA 90 bp TCCCCGCCCCCGCGGCCTGTGGCACTGGGCTTGCGTCTGTGGCTCTaGGGCGCAGCGCCCTGCCCGCTCTACTGCGGCGTCTGGCGCGGA +
Preference number: 6 (lower is better)
Translates to: SPPPRPVALGLRLWL*GAAPCPLYCGVWRG
Trigger: TCCGCGCCAGACGCCGCAGTAGAGCGGGCAGGGCGCTGCGCCCAAGAGCCACAGACGCAAGCCCAGTGCCACAGGCCGCGGGGGCGGGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS TCA 72 bp CTCCGCGCCCGCGGCTCGCGCGCTCCCGAGGAAGAGTaGGGGCGCGACGCGCACCAACGGTGGAGGTACGGG +
Preference number: 6 (lower is better)
Translates to: LRARGSRAPEEE*GRDAHQRWRYG
Trigger: CCCGTACCTCCACCGTTGGTGCGCGTCGCGCCCTCACTCTTCCTCGGGAGCGCGCGAGCCGCGGGCGCGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS GCA 72 bp CTGTGGCTCTTGGGCGCAGCGCCCTGCCCGCTCTACTaGGGCGTCTGGCGCGGAGGCGTGGCTTGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: LWLLGAAPCPLY*GVWRGGVAWPG
Trigger: GCCCGGCCAAGCCACGCCTCCGCGCCAGACGCCGCAGTAGAGCGGGCAGGGCGCTGCGCCCAAGAGCCACAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS CCA 72 bp CCGCTCTACTGCGGCGTCTGGCGCGGAGGCGTGGCTTaGCCGGGCCCGCCCACTTCGCGTCCGCGTCGTTCG +
Preference number: 6 (lower is better)
Translates to: PLYCGVWRGGVA*PGPPTSRPRRS
Trigger: CGAACGACGCGGACGCGAAGTGGGCGGGCCCGGCCAAGCCACGCCTCCGCGCCAGACGCCGCAGTAGAGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS CCA 72 bp CGGGCGCTGGGCCGGGACAGGGGGCTTGGGTCTCGTTaGGGCCGGGGCATGGCGGGAGGTTTGGGCCTCACC +
Preference number: 6 (lower is better)
Translates to: RALGRDRGLGSR*GRGMAGGLGLT
Trigger: GGTGAGGCCCAAACCTCCCGCCATGCCCCGGCCCCAACGAGACCCAAGCCCCCTGTCCCGGCCCAGCGCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS CCA 72 bp CCCACTTCGCGTCCGCGTCGTTCGGCTAGGGCCCCGTaGCTACCCGGTGCACGTGGACGGCGGGCTGCGTGG +
Preference number: 6 (lower is better)
Translates to: PTSRPRRSARAP*LPGARGRRAAW
Trigger: CCACGCAGCCCGCCGTCCACGTGCACCGGGTAGCCACGGGGCCCTAGCCGAACGACGCGGACGCGAAGTGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS CCA 72 bp CCGCCCCCGCGGCCTGTGGCACTGGGCTTGCGTCTGTaGCTCTTGGGCGCAGCGCCCTGCCCGCTCTACTGC +
Preference number: 6 (lower is better)
Translates to: PPPRPVALGLRL*LLGAAPCPLYC
Trigger: GCAGTAGAGCGGGCAGGGCGCTGCGCCCAAGAGCCACAGACGCAAGCCCAGTGCCACAGGCCGCGGGGGCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS GCA 72 bp CTGGGCTTGCGTCTGTGGCTCTTGGGCGCAGCGCCCTaGCCGCTCTACTGCGGCGTCTGGCGCGGAGGCGTG +
Preference number: 6 (lower is better)
Translates to: LGLRLWLLGAAP*PLYCGVWRGGV
Trigger: CACGCCTCCGCGCCAGACGCCGCAGTAGAGCGGGCAGGGCGCTGCGCCCAAGAGCCACAGACGCAAGCCCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS GCA 72 bp TGGGCCTCACCAGGGCGCCGGGGCCTTGGACCGCTCTaGGTCCCATGTTCTCTGTCCCCGGGCGCCGTCCTC +
Preference number: 6 (lower is better)
Translates to: WASPGRRGLGPL*VPCSLSPGAVL
Trigger: GAGGACGGCGCCCGGGGACAGAGAACATGGGACGCAGAGCGGTCCAAGGCCCCGGCGCCCTGGTGAGGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS GCA 72 bp AGGTACGGGCGAGGCGGCCCCGCGGCGCCCAGCTTCTaGCGGTCCCATGGCGCCCGCCGAAGAGTCTGCTTT +
Preference number: 6 (lower is better)
Translates to: RYGRGGPAAPSF*RSHGARRRVCF
Trigger: AAAGCAGACTCTTCGGCGGGCGCCATGGGACCGGCAGAAGCTGGGCGCCGCGGGGCCGCCTCGCCCGTACCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS CCA 72 bp AGGCGGCCCCGCGGCGCCCAGCTTCTGCCGGTCCCATaGCGCCCGCCGAAGAGTCTGCTTTTGGGCCCTGAG +
Preference number: 6 (lower is better)
Translates to: RRPRGAQLLPVP*RPPKSLLLGPE
Trigger: CTCAGGGCCCAAAAGCAGACTCTTCGGCGGGCGCCATGGGACCGGCAGAAGCTGGGCGCCGCGGGGCCGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS CCA 72 bp CGCGGCCTGTGGCACTGGGCTTGCGTCTGTGGCTCTTaGGCGCAGCGCCCTGCCCGCTCTACTGCGGCGTCT +
Preference number: 6 (lower is better)
Translates to: RGLWHWACVCGS*AQRPARSTAAS
Trigger: AGACGCCGCAGTAGAGCGGGCAGGGCGCTGCGCCCAAGAGCCACAGACGCAAGCCCAGTGCCACAGGCCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS CCA 72 bp GCGGGAGGTTTGGGCCTCACCAGGGCGCCGGGGCCTTaGACCGCTCTGCGTCCCATGTTCTCTGTCCCCGGG +
Preference number: 6 (lower is better)
Translates to: AGGLGLTRAPGP*TALRPMFSVPG
Trigger: CCCGGGGACAGAGAACATGGGACGCAGAGCGGTCCAAGGCCCCGGCGCCCTGGTGAGGCCCAAACCTCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS CAA 72 bp GGCGGGAGGTTTGGGCCTCACCAGGGCGCCGGGGCCTaGGACCGCTCTGCGTCCCATGTTCTCTGTCCCCGG +
Preference number: 6 (lower is better)
Translates to: GGRFGPHQGAGA*DRSASHVLCPR
Trigger: CCGGGGACAGAGAACATGGGACGCAGAGCGGTCCAAGGCCCCGGCGCCCTGGTGAGGCCCAAACCTCCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS GCA 72 bp ACCATCTGGAAGGCCTTCGCCAGGCTGAGGCCGCGGTaGCGCATGAGGTACGCGGTGCAGACGGCGGCCGAG +
Preference number: 6 (lower is better)
Translates to: TIWKAFARLRPR*RMRYAVQTAAE
Trigger: CTCGGCCGCCGTCTGCACCGCGTACCTCATGCGGCACCGCGGCCTCAGCCTGGCGAAGGCCTTCCAGATGGT
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS CAA 90 bp GCCCAGCTTCTGCCGGTCCCATGGCGCCCGCCGAAGAGTCTGCTTTaGGGCCCTGAGGATCTATTTTGGGGGCTCAGGCGCCCGCCCAGG +
Preference number: 6 (lower is better)
Translates to: AQLLPVPWRPPKSLL*GPEDLFWGLRRPPR
Trigger: CCTGGGCGGGCGCCTGAGCCCCCAAAATAGATCCTCAGGGCCCAAAAGCAGACTCTTCGGCGGGCGCCATGGGACCGGCAGAAGCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343217.6
ENST00000405954.2
CDS CCA 72 bp CCGTGGCTACCCGGTGCACGTGGACGGCGGGCTGCGTaGTTCCCGTGTCTTCACCCTTTCCCTAGTGACTGC +
Preference number: 6 (lower is better)
Translates to: PWLPGARGRRAA*FPCLHPFPSDC
Trigger: GCAGTCACTAGGGAAAGGGTGAAGACACGGGAACCACGCAGCCCGCCGTCCACGTGCACCGGGTAGCCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS GCA 72 bp CTTCTGGAGCTGAGACCAGAAGCCCGGGTTCGGTTCTaGTACCGGGCGAGCGCTCTTCACCATCTGGAAGGC +
Preference number: 6 (lower is better)
Translates to: LLELRPEARVRF*YRASALHHLEG
Trigger: GCCTTCCAGATGGTGAAGAGCGCTCGCCCGGTAGCAGAACCGAACCCGGGCTTCTGGTCTCAGCTCCAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343217.6
ENST00000405954.2
ENST00000438823.1
CDS CAA 72 bp GGTTCCCGTGTCTTCACCCTTTCCCTAGTGACTGCGTaGTCGGCTTTACGTTTATTCCTTTTTGTGGCCCGC +
Preference number: 6 (lower is better)
Translates to: GSRVFTLSLVTA*SALRLFLFVAR
Trigger: GCGGGCCACAAAAAGGAATAAACGTAAAGCCGACAACGCAGTCACTAGGGAAAGGGTGAAGACACGGGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS CAA 90 bp GGGCTGCGTGGTTCCCGTGTCTTCACCCTTTCCCTAGTGACTGCGTaGTCGGCTTTACGTTTATTCCTTTTTGTGGCCCGCTTTGTAATT +
Preference number: 6 (lower is better)
Translates to: GLRGSRVFTLSLVTA*SALRLFLFVARFVI
Trigger: AATTACAAAGCGGGCCACAAAAAGGAATAAACGTAAAGCCGACAACGCAGTCACTAGGGAAAGGGTGAAGACACGGGAACCACGCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343217.6
CDS GCA 72 bp CCGGATAGAGAGACAAATGTAAGACACGGCAGGCTTTaGCAGAAACAGCCTGTTATCTGTGTGCCACACTGT +
Preference number: 6 (lower is better)
Translates to: PDRETNVRHGRL*QKQPVICVPHC
Trigger: ACAGTGTGGCACACAGATAACAGGCTGTTTCTGGCAAAGCCTGCCGTGTCTTACATTTGTCTCTCTATCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479788.5