Pregenerated sensors for DUSP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000158050Ensembl transcript IDs: ENST00000288943.5, ENST00000488952.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTGGGCTCCAGGCCCTGGGCAGACGAACCCACAGACAGGGCTCCTaGTTGTCACAGCTTGTTCCTTGGAGCTCTCAGGCTGCCAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: LGLQALGRRTHRQGS*LSQLVPWSSQAAKG Trigger: GCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTGCCCAGGGCCTGGAGCCCAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR GCA 90 bp | ACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTGGAGCTCTCAGGCTaGCAAGGGCTTCAACATGGTGGTGGACCAGGGAGAGTCCACGGT | + |
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Preference number: 1 (lower is better) Translates to: TGLLVVTACSLELSG*QGLQHGGGPGRVHG Trigger: ACCGTGGACTCTCCCTGGTCCACCACCATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCAGGAGCCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR CCA 90 bp | AGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTaGAGCTCTCAGGCTGCCAAGGGCTTCAACATGGTGGTGGACCAG | + |
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Preference number: 1 (lower is better) Translates to: RRTHRQGSWLSQLVP*SSQAAKGFNMVVDQ Trigger: CTGGTCCACCACCATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR TCA 90 bp | CAACATGGTGGTGGACCAGGGAGAGTCCACGGTATAGCGTCTAGCTaGTTTCTGCCAGAGGATGGGGAGGGAAAGAGCAGACACACCCTT | + |
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Preference number: 1 (lower is better) Translates to: QHGGGPGRVHGIASS*FLPEDGEGKSRHTL Trigger: AAGGGTGTGTCTGCTCTTTCCCTCCCCATCCTCTGGCAGAAATCAGCTAGACGCTATACCGTGGACTCTCCCTGGTCCACCACCATGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR CAA 90 bp | GGGCTCCAGGCCCTGGGCAGACGAACCCACAGACAGGGCTCCTGGTaGTCACAGCTTGTTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: GLQALGRRTHRQGSW*SQLVPWSSQAAKGF Trigger: GAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTGCCCAGGGCCTGGAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR-3UTR TCA 90 bp | AGCAGACACACCCTTGGTTCCCGACCCCGAATGAGGGCCAGCCTCAGTCCCCCAGGGCTTCTGAAACTCTaGGGAGGTAGCAGCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: SRHTLGSRPRMRASLSPPGLLKL*GGSSPA Trigger: GGCAGGGCTGCTACCTCCTCAGAGTTTCAGAAGCCC...TGGGGGACTGAGGCTGGCCCTCATTCGGGGTCGGGAACCAAGGGTGTGTCTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCAGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTGGGTGAGGGGACTGTGCTaGCCCAGAGGGGAGCCCACC | + |
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Preference number: 2 (lower is better) Translates to: LGRRTHRQGSWLSQLVPWVRGLC*PRGEPT Trigger: GGTGGGCTCCCCTCTGGGCCAGCACAGTCCCCTCAC...CCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTGCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR CAA 90 bp | CCCTGGGCAGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTaGTTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTCAACATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: PWADEPTDRAPGCHS*FLGALRLPRASTWW Trigger: CCACCATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTGCCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR-3UTR TCA 90 bp | TGGTTGTCACAGCTTGTTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTCAACATGGTTCCCGACCCCGAATaGGGGCCAGCCTCAGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: WLSQLVPWSSQAAKGFNMVPDPE*GPASVP Trigger: GGGGACTGAGGCTGGCCCTCATTCGGGGTCGGGAAC...CATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCAGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTGGGAGCAGACACACCCTTaGTTCCCGACCCCGAATGAG | + |
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Preference number: 2 (lower is better) Translates to: LGRRTHRQGSWLSQLVPWEQTHP*FPTPNE Trigger: CTCATTCGGGGTCGGGAACCAAGGGTGTGTCTGCTC...CCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTGCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR CAA 90 bp | CAGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTaGGAGCTCTCAGGCTGCCAAGGGCTTCAACATGGTGGTGGACCA | + |
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Preference number: 2 (lower is better) Translates to: QTNPQTGLLVVTACS*ELSGCQGLQHGGGP Trigger: TGGTCCACCACCATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGGCAGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTAGGGCTTCAACATGGTaGTGGACCAGGGAGAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: PWADEPTDRAPGCHSLFLRASTW*WTRESP Trigger: TGGACTCTCCCTGGTCCACCACCATGTTGAAGCCCT...AAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTGCCCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGGCAGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTCCAAGGGCTTCAACATaGTGGTGGACCAGGGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: PWADEPTDRAPGCHSLFLPRAST*WWTRES Trigger: ACTCTCCCTGGTCCACCACCATGTTGAAGCCCTTGG...AAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTGCCCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCTCACAGACAGACACACGCAACATGACACACCCATCACTTCCCAAGTCCTTGGGCTCCAGGCCCTaGGCAGACGAACCCACAGAC | + |
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Preference number: 2 (lower is better) Translates to: KGSQTDTRNMTHPSLPKSLGSRP*ADEPTD Trigger: GTCTGTGGGTTCGTCTGCCCAGGGCCTGGAGCCCAA...GGACTTGGGAAGTGATGGGTGTGTCATGTTGCGTGTGTCTGTCTGTGAGCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR-3UTR TCA 90 bp | CAAATAATTTTCCAGCGCCAGCACAGGTGTGAAAGGCTCACAGACAGACACACGGGTATAGCGTCTAGCTaGTTTCTGCCAGAGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: QIIFQRQHRCERLTDRHTGIASS*FLPEDG Trigger: CCCATCCTCTGGCAGAAATCAGCTAGACGCTATACC...CGTGTGTCTGTCTGTGAGCCTTTCACACCTGTGCTGGCGCTGGAAAATTATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR CCA 72 bp | GAGGTAGCAGCCCTGCCAGAGGTGAGGGGACTGTGCTaGCCCAGAGGGGAGCCCACCAGTCCACAGTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: EVAALPEVRGLC*PRGEPTSPQSA Trigger: AGCTGACTGTGGACTGGTGGGCTCCCCTCTGGGCCAGCACAGTCCCCTCACCTCTGGCAGGGCTGCTACCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR CCA 72 bp | CAGGCCCTGGGCAGACGAACCCACAGACAGGGCTCCTaGTTGTCACAGCTTGTTCCTTGGAGCTCTCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: QALGRRTHRQGS*LSQLVPWSSQA Trigger: AGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTGCCCAGGGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR CCA 72 bp | TTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTCAACATaGTGGTGGACCAGGGAGAGTCCACGGTATAGCGTC | + |
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Preference number: 3 (lower is better) Translates to: FLGALRLPRAST*WWTRESPRYSV Trigger: GACGCTATACCGTGGACTCTCCCTGGTCCACCACCATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR TCA 72 bp | GGTGGACCAGGGAGAGTCCACGGTATAGCGTCTAGCTaGTTTCTGCCAGAGGATGGGGAGGGAAAGAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: GGPGRVHGIASS*FLPEDGEGKSR Trigger: TCTGCTCTTTCCCTCCCCATCCTCTGGCAGAAATCAGCTAGACGCTATACCGTGGACTCTCCCTGGTCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR GCA 72 bp | CTGGTTGTCACAGCTTGTTCCTTGGAGCTCTCAGGCTaGCAAGGGCTTCAACATGGTGGTGGACCAGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: LVVTACSLELSG*QGLQHGGGPGR Trigger: TCTCCCTGGTCCACCACCATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR GCA 90 bp | AGCAGACACACCCTTGGTTCCCGACCCCGAATGAGGGCCAGCCTCAGTCCCCCAGATCCCGCAGCAGCGTaGCCAGCGCCGCGCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: SRHTLGSRPRMRASLSPPDPAAA*PAPRTP Trigger: TGGAGTGCGCGGCGCTGGGCACGCTGCTGCGGGATC...TGGGGGACTGAGGCTGGCCCTCATTCGGGGTCGGGAACCAAGGGTGTGTCTGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | CAGACACACCCTTGGTTCCCGACCCCGAATGAGGGCCAGCCTCAGTCCCCCAGCGGAAGTACACGGCAGTaGGCCCCGCGCGGGTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: QTHPWFPTPNEGQPQSPSGSTRQ*APRGSR Trigger: ACGAGACCCGCGCGGGGCCCACTGCCGTGTACTTCC...GCTGGGGGACTGAGGCTGGCCCTCATTCGGGGTCGGGAACCAAGGGTGTGTCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | AGCAGAAGAGCACCAGGTCGGAAAGACCAGCATGCCGGCATTCCTAGAGCCCCCCGCGTTCCAAGGCACTaGCCGCGCGGCGCGCACGTG | + |
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Preference number: 4 (lower is better) Translates to: SRRAPGRKDQHAGIPRAPRVPRH*PRGAHV Trigger: CACGTGCGCGCCGCGCGGCCAGTGCCTTGGAACGCG...GGGGGCTCTAGGAATGCCGGCATGCTGGTCTTTCCGACCTGGTGCTCTTCTGCT 67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR TCA 90 bp | AGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTGGAGCTCTGCGGCCAGCAGCACATaGGCCGGGCTGTCGGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: RRTHRQGSWLSQLVPWSSAASST*AGLSGR Trigger: CCGGCCCGACAGCCCGGCTCATGTGCTGCTGGCCGC...AGAGCTCCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR TCA 90 bp | GGAGGGAAAGAGCAGACACACCCTTGGTTCCCGACCCCGAATGAGGGCCAGCCTCAGCCCCTGCAGGTCTaGCGAGTGACTGCAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GGKEQTHPWFPTPNEGQPQPLQV*RVTAAA Trigger: GGCAGCTGCAGTCACTCGTCAGACCTGCAGGGGCTG...AGGCTGGCCCTCATTCGGGGTCGGGAACCAAGGGTGTGTCTGCTCTTTCCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | AGCAGACACACCCTTGGTTCCCGACCCCGAATGAGGGCCAGCCTCAGTCCCCCATTGGGCTCCAGGCCCTaGGCAGACGAACCCACAGAC | + |
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Preference number: 4 (lower is better) Translates to: SRHTLGSRPRMRASLSPPLGSRP*ADEPTD Trigger: GTCTGTGGGTTCGTCTGCCCAGGGCCTGGAGCCCAA...TGGGGGACTGAGGCTGGCCCTCATTCGGGGTCGGGAACCAAGGGTGTGTCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR GCA 90 bp | CAGACACACCCTTGGTTCCCGACCCCGAATGAGGGCCAGCCTCAGTCCCCCAGCACGAGTGACTGCAGCTaGCCAGGAACAGGTAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: QTHPWFPTPNEGQPQSPSTSDCS*PGTGRA Trigger: TGCCCTACCTGTTCCTGGGCAGCTGCAGTCACTCGT...GCTGGGGGACTGAGGCTGGCCCTCATTCGGGGTCGGGAACCAAGGGTGTGTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | CACCAGGTCGGAAAGACCAGCATGCCGGCATTCCTAGAGCCCCCATGTGGGGGCTGGAGTCGGAGCGGCTaGTTTTGTCCCCTGTTGGCG | + |
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Preference number: 4 (lower is better) Translates to: HQVGKTSMPAFLEPPCGGWSRSG*FCPLLA Trigger: CGCCAACAGGGGACAAAACCAGCCGCTCCGACTCCA...GCCCCCACATGGGGGCTCTAGGAATGCCGGCATGCTGGTCTTTCCGACCTGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | CAGACACACCCTTGGTTCCCGACCCCGAATGAGGGCCAGCCTCAGTCCCCCAGCATGCCAGACAGATGGTaGCAGAGCGCGAGATACCCG | + |
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Preference number: 4 (lower is better) Translates to: QTHPWFPTPNEGQPQSPSMPDRW*QSARYP Trigger: CGGGTATCTCGCGCTCTGCCACCATCTGTCTGGCAT...GCTGGGGGACTGAGGCTGGCCCTCATTCGGGGTCGGGAACCAAGGGTGTGTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR GCA 90 bp | AGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTGGAGCTCTCCGCCACCGAGGCACTaGCCTCGTCCAGCACCACGG | + |
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Preference number: 4 (lower is better) Translates to: RRTHRQGSWLSQLVPWSSPPPRH*PRPAPR Trigger: CCGTGGTGCTGGACGAGGGCAGTGCCTCGGTGGCGG...AGAGCTCCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | AGCAGACACACCCTTGGTTCCCGACCCCGAATGAGGGCCAGCCTCAGTCCCCCAGCTTCAACATGGTGGTaGACCAGGGAGAGTCCACGG | + |
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Preference number: 4 (lower is better) Translates to: SRHTLGSRPRMRASLSPPASTWW*TRESPR Trigger: CCGTGGACTCTCCCTGGTCCACCACCATGTTGAAGC...TGGGGGACTGAGGCTGGCCCTCATTCGGGGTCGGGAACCAAGGGTGTGTCTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR TCA 90 bp | GGAGGGAAAGAGCAGACACACCCTTGGTTCCCGACCCCGAATGAGGGCCAGCCTCACGGCGACTCTGCATaGGGTATGCCAGACAGATGG | + |
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Preference number: 4 (lower is better) Translates to: GGKEQTHPWFPTPNEGQPHGDSA*GMPDRW Trigger: CCATCTGTCTGGCATACCTCATGCAGAGTCGCCGTG...AGGCTGGCCCTCATTCGGGGTCGGGAACCAAGGGTGTGTCTGCTCTTTCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | AAAGGCTCACAGACAGACACACGCAACATGACACACCCATCACTTCCCAAGTCCGGGCTCTCGTGGCGGTaGCGCTGCCCGAGCGGTCGA | + |
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Preference number: 4 (lower is better) Translates to: KGSQTDTRNMTHPSLPKSGLSWR*RCPSGR Trigger: TCGACCGCTCGGGCAGCGCCACCGCCACGAGAGCCC...GGACTTGGGAAGTGATGGGTGTGTCATGTTGCGTGTGTCTGTCTGTGAGCCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | CTGGGCAGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTGGGGCCCTCAAAGTGGTTaGGGCAGCTGGCGGACACGT | + |
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Preference number: 4 (lower is better) Translates to: LGRRTHRQGSWLSQLVPWGPQSG*GSWRTR Trigger: ACGTGTCCGCCAGCTGCCCCAACCACTTTGAGGGCC...CCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR GCA 90 bp | GTCACAGCTTGTTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTCAACATGGTGGTAGTCCAGCAGCAGCGTaGGTTCCGCCTCCCGCGGAT | + |
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Preference number: 4 (lower is better) Translates to: VTACSLELSGCQGLQHGGSPAAA*VPPPAD Trigger: ATCCGCGGGAGGCGGAACGCACGCTGCTGCTGGACT...ACCACCATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | GCAGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTGGAGCTTCGGGACAGCAGCCCTaGAAGCCGTCGAAGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: ADEPTDRAPGCHSLFLGASGQQP*KPSKPP Trigger: AGGAGGCTTCGACGGCTTCCAGGGCTGCTGTCCCGA...AGCTCCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | CACCAGGTCGGAAAGACCAGCATGCCGGCATTCCTAGAGCCCCCATGTGGGGGCCACAGACAGGGCTCCTaGTTGTCACAGCTTGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: HQVGKTSMPAFLEPPCGGHRQGS*LSQLVP Trigger: AGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTG...GCCCCCACATGGGGGCTCTAGGAATGCCGGCATGCTGGTCTTTCCGACCTGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR GCA 90 bp | CTGGGCAGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTGGGGTCTGACGAGTGACTaGAGCTGCCCAGGAACAGGT | + |
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Preference number: 4 (lower is better) Translates to: LGRRTHRQGSWLSQLVPWGLTSD*SCPGTG Trigger: ACCTGTTCCTGGGCAGCTGCAGTCACTCGTCAGACC...CCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTGCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | AGCAGAAGAGCACCAGGTCGGAAAGACCAGCATGCCGGCATTCCTAGAGCCCCCAAGCCTATGGCCTCCTaGAACCAGGCACTGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: SRRAPGRKDQHAGIPRAPKPMAS*NQALIS Trigger: GGAGATCAGTGCCTGGTTCCAGGAGGCCATAGGCTT...GGGGGCTCTAGGAATGCCGGCATGCTGGTCTTTCCGACCTGGTGCTCTTCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | AAAGGCTCACAGACAGACACACGCAACATGACACACCCATCACTTCCCAAGTCCGTGAGGGGACTGTGCTaGCCCAGAGGGGAGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: KGSQTDTRNMTHPSLPKSVRGLC*PRGEPT Trigger: GGTGGGCTCCCCTCTGGGCCAGCACAGTCCCCTCAC...GGACTTGGGAAGTGATGGGTGTGTCATGTTGCGTGTGTCTGTCTGTGAGCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR TCA 90 bp | AGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTGGAGCTCTTGCAGGTCTGACGAGTaGCTGCAGCTGCCCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: RRTHRQGSWLSQLVPWSSCRSDE*LQLPRN Trigger: GTTCCTGGGCAGCTGCAGTCACTCGTCAGACCTGCA...AGAGCTCCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR TCA 90 bp | GTCACAGCTTGTTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTCAACATGGTGGTGGGCTTCTGAAACTCTaGGGAGGTAGCAGCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VTACSLELSGCQGLQHGGGLLKL*GGSSPA Trigger: GGCAGGGCTGCTACCTCCTCAGAGTTTCAGAAGCCC...ACCACCATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR TCA 90 bp | GCAGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTGGAGCTGCGCCAGCACAGGTGTaGAAGGCTCACAGACAGACA | + |
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Preference number: 4 (lower is better) Translates to: ADEPTDRAPGCHSLFLGAAPAQV*KAHRQT Trigger: TGTCTGTCTGTGAGCCTTTCACACCTGTGCTGGCGC...AGCTCCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR GCA 90 bp | GTCACAGCTTGTTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTCAACATGGTGGTCCCCATGGCCACCGGTaGCTCTTCCTCTTCCTTTCG | + |
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Preference number: 4 (lower is better) Translates to: VTACSLELSGCQGLQHGGPHGHR*LFLFLS Trigger: CGAAAGGAAGAGGAAGAGGCACCGGTGGCCATGGGG...ACCACCATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | GTCACAGCTTGTTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTCAACATGGTGGTCGTAGACAGGAGCCCTaGAGTCGGAGCGGCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: VTACSLELSGCQGLQHGGRRQEP*SRSGWF Trigger: AAACCAGCCGCTCCGACTCCAGGGCTCCTGTCTACG...ACCACCATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | AGCAGAAGAGCACCAGGTCGGAAAGACCAGCATGCCGGCATTCCTAGAGCCCCCTCACAGCTTGTTCCTTaGAGCTCTCAGGCTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: SRRAPGRKDQHAGIPRAPSQLVP*SSQAAK Trigger: CTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGA...GGGGGCTCTAGGAATGCCGGCATGCTGGTCTTTCCGACCTGGTGCTCTTCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR CAA 72 bp | GACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTaGTTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: DEPTDRAPGCHS*FLGALRLPRAS Trigger: TGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR GCA 90 bp | CCCTGGGCAGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTTTGGAGCTCTCAGGCTaGCAAGGGCTTCAACATGGT | + |
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Preference number: 4 (lower is better) Translates to: PWADEPTDRAPGCHSLFLLELSG*QGLQHG Trigger: ACCATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAA...AAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTGCCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| 3UTR CAA 72 bp | CCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTaGGAGCTCTCAGGCTGCCAAGGGCTTCAACATGGT | + |
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Preference number: 4 (lower is better) Translates to: PQTGLLVVTACS*ELSGCQGLQHG Trigger: ACCATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR TCA 90 bp | CAAATAATTTTCCAGCGCCAGCACAGGTGTGAAAGGCTCACAGACAGACACACGGGGGCACCACCTCAGTaGCACAGCACCTGGGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: QIIFQRQHRCERLTDRHTGAPPQ*HSTWVS Trigger: TGAGACCCAGGTGCTGTGTCACTGAGGTGGTGCCCC...CGTGTGTCTGTCTGTGAGCCTTTCACACCTGTGCTGGCGCTGGAAAATTATTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR GCA 90 bp | TGGTTGTCACAGCTTGTTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTCAACATGCGCACACGGCGACTCTaGATGAGGTATGCCAGACAG | + |
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Preference number: 4 (lower is better) Translates to: WLSQLVPWSSQAAKGFNMRTRRL*MRYARQ Trigger: CTGTCTGGCATACCTCATGCAGAGTCGCCGTGTGCG...CATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | TGGTTGTCACAGCTTGTTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTCAACATGGAGCAGACACACCCTTaGTTCCCGACCCCGAATGAG | + |
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Preference number: 4 (lower is better) Translates to: WLSQLVPWSSQAAKGFNMEQTHP*FPTPNE Trigger: CTCATTCGGGGTCGGGAACCAAGGGTGTGTCTGCTC...CATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | GTCACAGCTTGTTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTCAACATGGTGGTAGGGCTTCAACATGGTaGTGGACCAGGGAGAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VTACSLELSGCQGLQHGGRASTW*WTRESP Trigger: TGGACTCTCCCTGGTCCACCACCATGTTGAAGCCCT...ACCACCATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | CCTGGTTGTCACAGCTTGTTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTCAACACCAAGGGCTTCAACATaGTGGTGGACCAGGGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: PGCHSLFLGALRLPRASTPRAST*WWTRES Trigger: ACTCTCCCTGGTCCACCACCATGTTGAAGCCCTTGG...TGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR TCA 90 bp | AGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTGGAGCTCTGGTATAGCGTCTAGCTaGTTTCTGCCAGAGGATGGG | + |
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Preference number: 4 (lower is better) Translates to: RRTHRQGSWLSQLVPWSSGIASS*FLPEDG Trigger: CCCATCCTCTGGCAGAAATCAGCTAGACGCTATACC...AGAGCTCCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR TCA 90 bp | GTCACAGCTTGTTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTCAACATGGTGGTCAGACACACGCAACATaGCACACCCATCACTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: VTACSLELSGCQGLQHGGQTHAT*HTHHFP Trigger: TGGGAAGTGATGGGTGTGTCATGTTGCGTGTGTCTG...ACCACCATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | AAAGGCTCACAGACAGACACACGCAACATGACACACCCATCACTTCCCAAGTCCAAAAGGCCCTCAAAGTaGTTGGGGCAGCTGGCGGAC | + |
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Preference number: 4 (lower is better) Translates to: KGSQTDTRNMTHPSLPKSKRPSK*LGQLAD Trigger: GTCCGCCAGCTGCCCCAACCACTTTGAGGGCCTTTT...GGACTTGGGAAGTGATGGGTGTGTCATGTTGCGTGTGTCTGTCTGTGAGCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CCA 90 bp | TGGTTGTCACAGCTTGTTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTCAACATGGGTATGCCAGACAGATaGTGGCAGAGCGCGAGATAC | + |
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Preference number: 4 (lower is better) Translates to: WLSQLVPWSSQAAKGFNMGMPDR*WQSARY Trigger: GTATCTCGCGCTCTGCCACCATCTGTCTGGCATACC...CATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR TCA 90 bp | TGGTTGTCACAGCTTGTTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTCAACATGTCTTCACCCAGTCAATaGAGCCTATGGCCTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: WLSQLVPWSSQAAKGFNMSSPSQ*SLWPPG Trigger: TCCAGGAGGCCATAGGCTTCATTGACTGGGTGAAGA...CATGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR GCA 90 bp | CCTGGTTGTCACAGCTTGTTCCTTGGAGCTCTCAGGCTGCCAAGGGCTTCAACAACTCTGCATGAGGTATaGCAGACAGATGGTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: PGCHSLFLGALRLPRASTTLHEV*QTDGGR Trigger: TCTGCCACCATCTGTCTGGCATACCTCATGCAGAGT...TGTTGAAGCCCTTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGACAACCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR TCA 90 bp | CTGGGCAGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTGGGTGTTAAATGTCAGCTaGGCACAAATAATTTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LGRRTHRQGSWLSQLVPWVLNVS*AQIIFQ Trigger: CTGGAAAATTATTTGTGCTCAGCTGACATTTAACAC...CCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTGCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS CCA 90 bp | AGGAGGGCCGCGCGCGCGGCGCCGCAGCAGCGCGTTCCAAGGCACTaGCCGCGCGGCGCGCACGTGGCGCCGGCAGAAGGCCAGGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: RRAARAAPQQRVPRH*PRGAHVAPAEGQEG Trigger: CCCTTCCTGGCCTTCTGCCGGCGCCACGTGCGCGCCGCGCGGCCAGTGCCTTGGAACGCGCTGCTGCGGCGCCGCGCGCGCGGCCCTCCT 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS TCA 90 bp | GTGGGCCCCGCGCGGGTCTCGTGCAGCAGCGCGGCCAGCAGCACATaGGCCGGGCTGTCGGGCCGGAGCTCCGCCACCGAGGCACTGCCC | + |
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Preference number: 5 (lower is better) Translates to: VGPARVSCSSAASST*AGLSGRSSATEALP Trigger: GGGCAGTGCCTCGGTGGCGGAGCTCCGGCCCGACAGCCCGGCTCATGTGCTGCTGGCCGCGCTGCTGCACGAGACCCGCGCGGGGCCCAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS GCA 90 bp | GCACATGAGCCGGGCTGTCGGGCCGGAGCTCCGCCACCGAGGCACTaGCCTCGTCCAGCACCACGGCCCGCGCCAGCTCCCCGCGGACCA | + |
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Preference number: 5 (lower is better) Translates to: AHEPGCRAGAPPPRH*PRPAPRPAPAPRGP Trigger: TGGTCCGCGGGGAGCTGGCGCGGGCCGTGGTGCTGGACGAGGGCAGTGCCTCGGTGGCGGAGCTCCGGCCCGACAGCCCGGCTCATGTGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CAA 90 bp | AGCAGAAGAGCACCAGGTCGGAAAGACCAGCATGCCGGCATTCCTAGAGCCCCCTCGGAGCGGCTGGTTTaGTCCCCTGTTGGCGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SRRAPGRKDQHAGIPRAPSERLV*SPVGGS Trigger: GCTGCCGCCAACAGGGGACAAAACCAGCCGCTCCGA...GGGGGCTCTAGGAATGCCGGCATGCTGGTCTTTCCGACCTGGTGCTCTTCTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CAA 90 bp | AGCAGAAGAGCACCAGGTCGGAAAGACCAGCATGCCGGCATTCCTAGAGCCCCCCAGCTGGCGGACACGTaGAGGACGGCTGTGATGCCA | + |
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Preference number: 5 (lower is better) Translates to: SRRAPGRKDQHAGIPRAPQLADT*RTAVMP Trigger: TGGCATCACAGCCGTCCTCAACGTGTCCGCCAGCTG...GGGGGCTCTAGGAATGCCGGCATGCTGGTCTTTCCGACCTGGTGCTCTTCTGCT 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CAA 90 bp | CACCAGGTCGGAAAGACCAGCATGCCGGCATTCCTAGAGCCCCCATGTGGGGGCGTCACAGCTTGTTCCTaGGAGCTCTCAGGCTGCCAA | + |
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Preference number: 5 (lower is better) Translates to: HQVGKTSMPAFLEPPCGGVTACS*ELSGCQ Trigger: TTGGCAGCCTGAGAGCTCCAAGGAACAAGCTGTGAC...GCCCCCACATGGGGGCTCTAGGAATGCCGGCATGCTGGTCTTTCCGACCTGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS TCA 90 bp | TGGGCTGGCCGAGACAAGAGGACTCCTCAGCCAGTCCTCCTGACCTaGGACAGGTCTCAGGAATGTGCGGAGGACACACCGGGACATACA | + |
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Preference number: 5 (lower is better) Translates to: WAGRDKRTPQPVLLT*DRSQECAEDTPGHT Trigger: TGTATGTCCCGGTGTGTCCTCCGCACATTCCTGAGACCTGTCTCAGGTCAGGAGGACTGGCTGAGGAGTCCTCTTGTCTCGGCCAGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488952.1 |
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| CDS-3UTR CAA 90 bp | GGAGGGAAAGAGCAGACACACCCTTGGTTCCCGACCCCGAATGAGGGCCAGCCTAGACAGGGCTCCTGGTaGTCACAGCTTGTTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: GGKEQTHPWFPTPNEGQPRQGSW*SQLVPW Trigger: CCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCT...AGGCTGGCCCTCATTCGGGGTCGGGAACCAAGGGTGTGTCTGCTCTTTCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CAA 90 bp | CTGGGCAGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTGGCCTGGTTGTCACAGCTaGTTCCTTGGAGCTCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LGRRTHRQGSWLSQLVPWPGCHS*FLGALR Trigger: CCTGAGAGCTCCAAGGAACAAGCTGTGACAACCAGG...CCAAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS-3UTR CAA 90 bp | CCCTGGGCAGACGAACCCACAGACAGGGCTCCTGGTTGTCACAGCTTGTTCCTTATCTCCACCATCTGGTaGTCCTCCACAGGGATACTC | + |
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Preference number: 5 (lower is better) Translates to: PWADEPTDRAPGCHSLFLISTIW*SSTGIL Trigger: GAGTATCCCTGTGGAGGACAACCAGATGGTGGAGAT...AAGGAACAAGCTGTGACAACCAGGAGCCCTGTCTGTGGGTTCGTCTGCCCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS TCA 72 bp | GCGCGGGTCTCGTGCAGCAGCGCGGCCAGCAGCACATaGGCCGGGCTGTCGGGCCGGAGCTCCGCCACCGAG | + |
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Preference number: 6 (lower is better) Translates to: ARVSCSSAASST*AGLSGRSSATE Trigger: CTCGGTGGCGGAGCTCCGGCCCGACAGCCCGGCTCATGTGCTGCTGGCCGCGCTGCTGCACGAGACCCGCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS CCA 72 bp | AGCGCGTTCCAAGGCACTGGCCGCGCGGCGCGCACGTaGCGCCGGCAGAAGGCCAGGAAGGGGCGGCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SAFQGTGRAART*RRQKARKGRQS Trigger: GGACTGCCGCCCCTTCCTGGCCTTCTGCCGGCGCCACGTGCGCGCCGCGCGGCCAGTGCCTTGGAACGCGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS CCA 72 bp | AGCCGTCGAAGCCTCCTCGCAGGAAGTACACGGCAGTaGGCCCCGCGCGGGTCTCGTGCAGCAGCGCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SRRSLLAGSTRQ*APRGSRAAARP Trigger: TGGCCGCGCTGCTGCACGAGACCCGCGCGGGGCCCACTGCCGTGTACTTCCTGCGAGGAGGCTTCGACGGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS CCA 72 bp | GCGGGGGCCTCAGAGCACAGATCGGGACAGCAGCCCTaGAAGCCGTCGAAGCCTCCTCGCAGGAAGTACACG | + |
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Preference number: 6 (lower is better) Translates to: AGASEHRSGQQP*KPSKPPRRKYT Trigger: CGTGTACTTCCTGCGAGGAGGCTTCGACGGCTTCCAGGGCTGCTGTCCCGATCTGTGCTCTGAGGCCCCCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS CAA 72 bp | AGGCCCTCAAAGTGGTTGGGGCAGCTGGCGGACACGTaGAGGACGGCTGTGATGCCACAGGCCTGCAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: RPSKWLGQLADT*RTAVMPQACSP Trigger: GGGGCTGCAGGCCTGTGGCATCACAGCCGTCCTCAACGTGTCCGCCAGCTGCCCCAACCACTTTGAGGGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000288943.5 ENST00000488952.1 |
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| CDS CCA 72 bp | TCTCCACAGGGCCACCCTGGTCGTAGACAGGAGCCCTaGAGTCGGAGCGGCTGGTTTTGTCCCCTGTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: SPQGHPGRRQEP*SRSGWFCPLLA Trigger: CGCCAACAGGGGACAAAACCAGCCGCTCCGACTCCAGGGCTCCTGTCTACGACCAGGGTGGCCCTGTGGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000288943.5 |
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| CDS CCA 72 bp | CTGTTCTTCACCCAGTCAATGAAGCCTATGGCCTCCTaGAACCAGGCACTGATCTCCACCATCTGGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LFFTQSMKPMAS*NQALISTIWLS Trigger: GGACAACCAGATGGTGGAGATCAGTGCCTGGTTCCAGGAGGCCATAGGCTTCATTGACTGGGTGAAGAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000288943.5 ENST00000488952.1 |
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