RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DUSP16 (Homo sapiens)

Ensembl gene IDs: ENSG00000111266

Ensembl transcript IDs: ENST00000228862.3, ENST00000298573.9, ENST00000536236.1, ENST00000539940.1, ENST00000541207.1, ENST00000545864.1, ENST00000626413.3, ENST00000626461.1, ENST00000627160.1, ENST00000628303.1, ENST00000629698.1, ENST00000630190.1

Found 792 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGCGGGCTGTCCTCTAACAGCGACGGCTGCACGCTGGGCACGCTaGGCACGCTGGCGGGATGCACGGGCCTTTGTCCTGCTGCCTCTG +
Preference number: 1 (lower is better)
Translates to: PAGCPLTATAARWAR*ARWRDARAFVLLPL
Trigger: CAGAGGCAGCAGGACAAAGGCCCGTGCATCCCGCCAGCGTGCCCAGCGTGCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 90 bp GCGCCTGTACCAGCGGGCTGTCCTCTAACAGCGACGGCTGCACGCTaGGCACGCTGGGCACGCTGGCGGGATGCACGGGCCTTTGTCCTG +
Preference number: 1 (lower is better)
Translates to: APVPAGCPLTATAAR*ARWARWRDARAFVL
Trigger: CAGGACAAAGGCCCGTGCATCCCGCCAGCGTGCCCAGCGTGCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 90 bp GCCAGCTCCGCCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTaGGCACAGAATAGACTTGGTCTCCGCAAGTGGGCAGCTGGCTGC +
Preference number: 1 (lower is better)
Translates to: ASSAASQLCHLASAA*AQNRLGLRKWAAGC
Trigger: GCAGCCAGCTGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGAGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR TCA 90 bp GCTTATTGCTGTCTTCCAGCCTGTCTGCGGACAGGTGCAGCCCACTaGGCGCCTGTACCAGCGGGCTGTCCTCTAACAGCGACGGCTGCA +
Preference number: 1 (lower is better)
Translates to: AYCCLPACLRTGAAH*APVPAGCPLTATAA
Trigger: TGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAGTGGGCTGCACCTGTCCGCAGACAGGCTGGAAGACAGCAATAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 90 bp AAAAGGGACCTCTGGGCGGTGCCACTGCTGCTGGTTCTGACCGAATaGAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGC +
Preference number: 1 (lower is better)
Translates to: KRDLWAVPLLLVLTE*NRLLWLSEGLAVCS
Trigger: GCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGGTCAGAACCAGCAGCAGTGGCACCGCCCAGAGGTCCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 90 bp GCGGTGCCACTGCTGCTGGTTCTGACCGAATGCAATCGCTTGCTCTaGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTGGGGATGCTG +
Preference number: 1 (lower is better)
Translates to: AVPLLLVLTECNRLL*LSEGLAVCSFLGML
Trigger: CAGCATCCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGGTCAGAACCAGCAGCAGTGGCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 90 bp GGGGCTCTCTTCATGCCAGCTCCGCCGCGAGTCAGCTCTGTCACTTaGCTTCTGCCGCCTGCGCACAGAATAGACTTGGTCTCCGCAAGT +
Preference number: 1 (lower is better)
Translates to: GALFMPAPPRVSSVT*LLPPAHRIDLVSAS
Trigger: ACTTGCGGAGACCAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGAGCTGGCATGAAGAGAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR TCA 90 bp GGCACAGGGTGGACTGAGGGGCGTCTCGCTTTTCTGTCCACCCTCTaGGACAGCAGGGACAGGTTCATTTGGCTTCTCCAGGTGCAGCAG +
Preference number: 1 (lower is better)
Translates to: GTGWTEGRLAFLSTL*DSRDRFIWLLQVQQ
Trigger: CTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTGCTGTCTCAGAGGGTGGACAGAAAAGCGAGACGCCCCTCAGTCCACCCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR TCA 90 bp GTGGAGATAAAAGGGACCTCTGGGCGGTGCCACTGCTGCTGGTTCTaGCCGAATGCAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCGG +
Preference number: 1 (lower is better)
Translates to: VEIKGTSGRCHCCWF*PNAIACSGCLKAWR
Trigger: CCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGGTCAGAACCAGCAGCAGTGGCACCGCCCAGAGGTCCCTTTTATCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 90 bp GAACGCTTGAGCTTATTGCTGTCTTCCAGCCTGTCTGCGGACAGGTaGAGCCCACTGAGCGCCTGTACCAGCGGGCTGTCCTCTAACAGC +
Preference number: 1 (lower is better)
Translates to: ERLSLLLSSSLSADR*SPLSACTSGLSSNS
Trigger: GCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAGTGGGCTGCACCTGTCCGCAGACAGGCTGGAAGACAGCAATAAGCTCAAGCGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 90 bp CAGAGAGAAGGAACGCTTGAGCTTATTGCTGTCTTCCAGCCTGTCTaGGGACAGGTGCAGCCCACTGAGCGCCTGTACCAGCGGGCTGTC +
Preference number: 1 (lower is better)
Translates to: QREGTLELIAVFQPV*GQVQPTERLYQRAV
Trigger: GACAGCCCGCTGGTACAGGCGCTCAGTGGGCTGCACCTGTCCGCAGACAGGCTGGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 90 bp GCCTGCGCACAGAATAGACTTGGTCTCCGCAAGTGGGCAGCTGGCTaGAGCTGTAGGCAGAGTAACTGGCACTGCCTCCGTAGATGGCTG +
Preference number: 1 (lower is better)
Translates to: ACAQNRLGLRKWAAG*SCRQSNWHCLRRWL
Trigger: CAGCCATCTACGGAGGCAGTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 90 bp GGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTaGCACTGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGG +
Preference number: 1 (lower is better)
Translates to: GLRKWAAGCSCRQSN*HCLRRWLRQSRSVR
Trigger: CCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 90 bp TTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGGTCTCCGCAAGTaGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACTGCCTC +
Preference number: 1 (lower is better)
Translates to: LASAACAQNRLGLRK*AAGCSCRQSNWHCL
Trigger: GAGGCAGTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 90 bp CGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACTaGCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTG +
Preference number: 1 (lower is better)
Translates to: RKWAAGCSCRQSNWH*LRRWLRQSRSVRTL
Trigger: CAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 90 bp TCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTGGGGATGCTaGCTTCCTCCTTATCAGGACTGGTTTCGGGAGTCTGCTCCGATA +
Preference number: 1 (lower is better)
Translates to: SGCLKAWRSAASWGC*LPPYQDWFRESAPI
Trigger: TATCGGAGCAGACTCCCGAAACCAGTCCTGATAAGGAGGAAGCCAGCATCCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 90 bp TCCTCCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTaGGCGGTGCCACTGCTGCTGGTTCTGACCGAATGCAATCGCTTG +
Preference number: 1 (lower is better)
Translates to: SSTLPLRCSGDKRDL*AVPLLLVLTECNRL
Trigger: CAAGCGATTGCATTCGGTCAGAACCAGCAGCAGTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 90 bp CCACCCTCTGAGACAGCAGGGACAGGTTCATTTGGCTTCTCCAGGTaGAGCAGCTTGAGTTTGCTCTTTGGCCCTGATGCTCCAGTCTGG +
Preference number: 1 (lower is better)
Translates to: PPSETAGTGSFGFSR*SSLSLLFGPDAPVW
Trigger: CCAGACTGGAGCATCAGGGCCAAAGAGCAAACTCAAGCTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTGCTGTCTCAGAGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 90 bp ACCGAATGCAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCGGTCTaGAGCTTCTTGGGGATGCTGGCTTCCTCCTTATCAGGACTGGTT +
Preference number: 1 (lower is better)
Translates to: TECNRLLWLSEGLAV*SFLGMLASSLSGLV
Trigger: AACCAGTCCTGATAAGGAGGAAGCCAGCATCCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 90 bp TGGCAGCTTCTGCGTTTAAACTGCTTTTCAAAGGGGCTCTCTTCATaGCAGCTCCGCCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGC +
Preference number: 1 (lower is better)
Translates to: WQLLRLNCFSKGLSS*QLRRESALSLGFCR
Trigger: GCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGAGCTGGCATGAAGAGAGCCCCTTTGAAAAGCAGTTTAAACGCAGAAGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 90 bp GCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACTGCCTCCGTAGATaGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCAAAATACC +
Preference number: 1 (lower is better)
Translates to: AGCSCRQSNWHCLRR*LRQSRSVRTLWQNT
Trigger: GGTATTTTGCCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCAGTTACTCTGCCTACAGCTGCAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR TCA 90 bp TCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTAGACTaGCTGCCCACTTTCCCCAGCTCTTCCCGTGACCTGTTCTCTGAC +
Preference number: 1 (lower is better)
Translates to: SQETSMISMLPEKLD*LPTFPSSSRDLFSD
Trigger: GTCAGAGAACAGGTCACGGGAAGAGCTGGGGAAAGTGGGCAGTCAGTCTAGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR TCA 90 bp CCTCCGAGGCCACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTaGTTATCTGACACTAGTGAACCAGCACTAAAGGCTGTAGGATGT +
Preference number: 1 (lower is better)
Translates to: PPRPPLRHGSLDSKN*LSDTSEPALKAVGC
Trigger: ACATCCTACAGCCTTTAGTGCTGGTTCACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTGGCCTCGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR TCA 90 bp TCCTCCTTATCAGGACTGGTTTCGGGAGTCTGCTCCGATAGTTCCTaGACAGGGGAGAACTGGCATAGCTTGTTGGTCCCATCCAGAGTA +
Preference number: 1 (lower is better)
Translates to: SSLSGLVSGVCSDSS*TGENWHSLLVPSRV
Trigger: TACTCTGGATGGGACCAACAAGCTATGCCAGTTCTCCCCTGTTCAGGAACTATCGGAGCAGACTCCCGAAACCAGTCCTGATAAGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR TCA 90 bp CCTATGTTCAGCTGCCAGGACCGATTCCATACAGTGATTGTAGGTTaGGGACTGAGGACGCCCCTTTGCTCTCGCTCCATTTTGATTTGC +
Preference number: 1 (lower is better)
Translates to: PMFSCQDRFHTVIVG*GLRTPLCSRSILIC
Trigger: GCAAATCAAAATGGAGCGAGAGCAAAGGGGCGTCCTCAGTCCTCAACCTACAATCACTGTATGGAATCGGTCCTGGCAGCTGAACATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR GCA 90 bp ATGATGCTCTCTCCAAATTCCATTTGGCAGCTTCTGCGTTTAAACTaGTTTTCAAAGGGGCTCTCTTCATGCCAGCTCCGCCGCGAGTCA +
Preference number: 1 (lower is better)
Translates to: MMLSPNSIWQLLRLN*FSKGLSSCQLRRES
Trigger: TGACTCGCGGCGGAGCTGGCATGAAGAGAGCCCCTTTGAAAAGCAGTTTAAACGCAGAAGCTGCCAAATGGAATTTGGAGAGAGCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 90 bp GAACAGGACAGGTTTCACCACTGCCTCCTTTGGCAACTTGAGTGGTaGTGTTCCCACCGAGTTTATGGCTGCAAAGATAGGTCTTTTCTC +
Preference number: 1 (lower is better)
Translates to: EQDRFHHCLLWQLEW*CSHRVYGCKDRSFL
Trigger: GAGAAAAGACCTATCTTTGCAGCCATAAACTCGGTGGGAACACCACCACTCAAGTTGCCAAAGGAGGCAGTGGTGAAACCTGTCCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR TCA 90 bp TCCTCACTAAAGCCTCTCTCAGCCCTACTAGTAAATGTGAAAGTCTaGGGCAATCATAGAAACATCAGCCCCATCGCATGCCGAGGGGAT +
Preference number: 1 (lower is better)
Translates to: SSLKPLSALLVNVKV*GNHRNISPIACRGD
Trigger: ATCCCCTCGGCATGCGATGGGGCTGATGTTTCTATGATTGCCTCAGACTTTCACATTTACTAGTAGGGCTGAGAGAGGCTTTAGTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR TCA 90 bp CCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGTaGCCTCCTATGTTCAGCTGCCAGGACCGATTCCATACAGTGATT +
Preference number: 1 (lower is better)
Translates to: PGGCLKANLHYHLFQ*PPMFSCQDRFHTVI
Trigger: AATCACTGTATGGAATCGGTCCTGGCAGCTGAACATAGGAGGTCACTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR GCA 90 bp AAGACACGCCGGCCAGCGTTTCCAAAAACAGCTTGGCCATGGCTTTaGACTCTATTCACAACTGATCAAAACTCAATGGTCTTCTCAGCT +
Preference number: 1 (lower is better)
Translates to: KTRRPAFPKTAWPWL*TLFTTDQNSMVFSA
Trigger: AGCTGAGAAGACCATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTTTGGAAACGCTGGCCGGCGTGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR GCA 90 bp CCCTCTTCTGCCTTCACTTTACACCCCATCATAGCACATTATTTGTaGACAACTAGTGAGGTCTGTGCGGCTCATCATCCCCATAACCAA +
Preference number: 1 (lower is better)
Translates to: PSSAFTLHPIIAHYL*TTSEVCAAHHPHNQ
Trigger: TTGGTTATGGGGATGATGAGCCGCACAGACCTCACTAGTTGTGCACAAATAATGTGCTATGATGGGGTGTAAAGTGAAGGCAGAAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR TCA 90 bp GAGGTCTGTGCGGCTCATCATCCCCATAACCAAGTCGGTCTGTGTTaGGTCATATCATTCTGTGCTGGTTTTAGAAGTCACCATAGGAAA +
Preference number: 1 (lower is better)
Translates to: EVCAAHHPHNQVGLC*VISFCAGFRSHHRK
Trigger: TTTCCTATGGTGACTTCTAAAACCAGCACAGAATGATATGACTCAACACAGACCGACTTGGTTATGGGGATGATGAGCCGCACAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR GCA 90 bp GACCAGCACTTTCCCAGTATCATAACAATGCGGCTGACCCTCTTCTaGCTTCACTTTACACCCCATCATAGCACATTATTTGTGCACAAC +
Preference number: 1 (lower is better)
Translates to: DQHFPSIITMRLTLF*LHFTPHHSTLFVHN
Trigger: GTTGTGCACAAATAATGTGCTATGATGGGGTGTAAAGTGAAGGCAGAAGAGGGTCAGCCGCATTGTTATGATACTGGGAAAGTGCTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR TCA 90 bp GCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTaGAGGTGCTGCTGCTCTGCTACCAACCCAAATAAATTCACATTT +
Preference number: 1 (lower is better)
Translates to: AVKQKGQKHLLWLRI*RCCCSATNPNKFTF
Trigger: AAATGTGAATTTATTTGGGTTGGTAGCAGAGCAGCAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR TCA 90 bp TTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCATaGCCACACTCTGGAAGTGGTGAACTGTTACACATTTGGTGTGTG +
Preference number: 1 (lower is better)
Translates to: LARSYCFPFLNMFWA*PHSGSGELLHIWCV
Trigger: CACACACCAAATGTGTAACAGTTCACCACTTCCAGAGTGTGGTCATGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR TCA 90 bp TCCTTTCTTAAACATGTTTTGGGCATGACCACACTCTGGAAGTGGTaGACTGTTACACATTTGGTGTGTGTGTACATAACATCAAAAACT +
Preference number: 1 (lower is better)
Translates to: SFLKHVLGMTTLWKW*TVTHLVCVYITSKT
Trigger: AGTTTTTGATGTTATGTACACACACACCAAATGTGTAACAGTTCACCACTTCCAGAGTGTGGTCATGCCCAAAACATGTTTAAGAAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp CTTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACGGCCAGCAGACTTCGTaGGGTGCTGCTGGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: LGLRKWAAGCSCRQSNWHGQQTS*GAAGWW
Trigger: CCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCC...GTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CAA 90 bp CTCTGGGCGGTGCCACTGCTGCTGGTTCTGACCGAATGCAATCGCTaGCTCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: LWAVPLLLVLTECNR*LWLSEGLAVCSFLG
Trigger: CCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGGTCAGAACCAGCAGCAGTGGCACCGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp TCCGCCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGCTCTGGCTGTCTaGAGGCCTGGCGGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: SAASQLCHLASAACAQNRLALAV*RPGGLQ
Trigger: CTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAG...TCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp GCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGCTGGTGGAAAGGCCGAAAAGGAAGGCCTGGCGGTCTaGAGCTTCTTGGGGATGCTG +
Preference number: 2 (lower is better)
Translates to: AQASRLREVLLAGGKAEKEGLAV*SFLGML
Trigger: CAGCATCCCCAAGAAGCTGCAGACCGCCAGGCCTTC...CTTTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CAA 90 bp AGGGGCTCTCTTCATGCCAGCTCCGCCGCGAGTCAGCTCTGTCACTaGGCTTCTGCCGCCTGCGCACAGAATAGACTTGGTCTCCGCAAG +
Preference number: 2 (lower is better)
Translates to: RGSLHASSAASQLCH*ASAACAQNRLGLRK
Trigger: CTTGCGGAGACCAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGAGCTGGCATGAAGAGAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp CTGAGCGCCTGTACCAGCGGGCTGTCCTCTAACAGCGACGGCTGCACGCTGGGCTTTGCTCTTTGGCCCTaGTGCTCCAGTCTGGTTCTT +
Preference number: 2 (lower is better)
Translates to: LSACTSGLSSNSDGCTLGFALWP*CSSLVL
Trigger: AAGAACCAGACTGGAGCATCAGGGCCAAAGAGCAAA...GCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp TTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACTCTGTCTGCGGACAGGTaGAGCCCACTGAGCGCCTGT +
Preference number: 2 (lower is better)
Translates to: LVSASGQLAAAVGRVTGTLSADR*SPLSAC
Trigger: ACAGGCGCTCAGTGGGCTGCACCTGTCCGCAGACAG...AGTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCAAGCAGCTCCAGAGCCTaGCTCCGAGGCCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRASSSRA*LRGHPF
Trigger: GAAGGGGTGGCCTCGGAGGCAGGCTCTGGAGCTGCT...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CCA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGAGAGTCGGCACAGGGTaGACTGAGGGGCGTCTCGCT +
Preference number: 2 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLRVGTG*TEGRLA
Trigger: AGCGAGACGCCCCTCAGTCCACCCTGTGCCGACTCT...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACTTGTCCTGCTGCCTCTaGGGTAGCAGAGTCGGCACA +
Preference number: 2 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHLSCCL*GSRVGT
Trigger: TGTGCCGACTCTGCTACCTCAGAGGCAGCAGGACAA...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp TCCGAGTGCCAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGGCAGCTTCTTGGGGATaGTGGCTTCCTCCTTATCAG +
Preference number: 2 (lower is better)
Translates to: SECQPLRPRPADFVRCCWAASWG*WLPPYQ
Trigger: CTGATAAGGAGGAAGCCAGCATCCCCAAGAAGCTGC...CCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CCA 90 bp TCCGAGTGCCAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGAGGGACAGGTTCATTTaGCTTCTCCAGGTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: SECQPLRPRPADFVRCCWRDRFI*LLQVQQ
Trigger: CTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCT...CCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CAA 90 bp GTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTaGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTA +
Preference number: 2 (lower is better)
Translates to: VSSVTWLLPPAHRID*VSASGQLAAAVGRV
Trigger: TACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp TGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCAAAATACAGGTGCAGCCCACTaGGCGCCTGTACCAGCGGGC +
Preference number: 2 (lower is better)
Translates to: CLRRWLRQSRSVRTLWQNTGAAH*APVPAG
Trigger: GCCCGCTGGTACAGGCGCTCAGTGGGCTGCACCTGT...ATTTTGCCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACCCGAATGCAATCGCTTaGTCTGGCTGTCTGAAGGCC +
Preference number: 2 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHPNAIA*SGCLKA
Trigger: GGCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGG...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp TCCGCCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACAGAGTAACTGGCACTaGCTCCGTAGATGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: SAASQLCHLASAACAQNRQSNWH*LRRWLR
Trigger: CCTCAGCCATCTACGGAGGCAGTGCCAGTTACTCTG...TCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CCA 90 bp GCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGCTGGTGGAAAGGCCGAAAAGGCTTCTTGGGGATGCTaGCTTCCTCCTTATCAGGAC +
Preference number: 2 (lower is better)
Translates to: AQASRLREVLLAGGKAEKASWGC*LPPYQD
Trigger: GTCCTGATAAGGAGGAAGCCAGCATCCCCAAGAAGC...CTTTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CCA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGGATAAAAGGGACCTCTaGGCGGTGCCACTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLDKRDL*AVPLLL
Trigger: CAGCAGCAGTGGCACCGCCCAGAGGTCCCTTTTATC...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACGCAGCTTCTTGGGGATaGTGGCTTCCTCCTTATCAG +
Preference number: 2 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHAASWG*WLPPYQ
Trigger: CTGATAAGGAGGAAGCCAGCATCCCCAAGAAGCTGC...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CCA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGTTCGTGAGGTGCTGCTaGCTGGTGGAAAGGCCGAAA +
Preference number: 2 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLFVRCC*LVERPK
Trigger: TTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAA...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CCA 90 bp TCCGCCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGATGTAGGCAGAGTAACTaGCACTGCCTCCGTAGATGG +
Preference number: 2 (lower is better)
Translates to: SAASQLCHLASAACAQNRCRQSN*HCLRRW
Trigger: CCATCTACGGAGGCAGTGCCAGTTACTCTGCCTACA...TCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CCA 90 bp TGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCAAAATAGAGTCGGCACAGGGTaGACTGAGGGGCGTCTCGCT +
Preference number: 2 (lower is better)
Translates to: CLRRWLRQSRSVRTLWQNRVGTG*TEGRLA
Trigger: AGCGAGACGCCCCTCAGTCCACCCTGTGCCGACTCT...ATTTTGCCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp CTTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACGAGAGAAGGAACGCTTaGGCTTATTGCTGTCTTCCA +
Preference number: 2 (lower is better)
Translates to: LGLRKWAAGCSCRQSNWHERRNA*AYCCLP
Trigger: TGGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTC...GTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCACCCGACTTTCCTGTCTaGGGTACTGGGTTTGCTCTA +
Preference number: 2 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRAPDFPV*GTGFAL
Trigger: TAGAGCAAACCCAGTACCTCAGACAGGAAAGTCGGG...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp TCCGAGTGCCAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGATCCCAGCTAAACAGTaGACTAGAACACATCCATTG +
Preference number: 2 (lower is better)
Translates to: SECQPLRPRPADFVRCCWIPAKQ*TRTHPL
Trigger: CAATGGATGTGTTCTAGTGCACTGTTTAGCTGGGAT...CCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp TGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCAAAATGTCTTCCAGCCTGTCTaGGGACAGGTGCAGCCCACT +
Preference number: 2 (lower is better)
Translates to: CLRRWLRQSRSVRTLWQNVFQPV*GQVQPT
Trigger: AGTGGGCTGCACCTGTCCGCAGACAGGCTGGAAGAC...ATTTTGCCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGGAGAGAAGGAACGCTTaGGCTTATTGCTGTCTTCCA +
Preference number: 2 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLERRNA*AYCCLP
Trigger: TGGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTC...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCAGACAGGTTTCACCACTaGCTCCTTTGGCAACTTGAG +
Preference number: 2 (lower is better)
Translates to: APSTVSNWPELQALPRSADRFHH*LLWQLE
Trigger: CTCAAGTTGCCAAAGGAGGCAGTGGTGAAACCTGTC...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCAGGCTCTCCCAAGATCTaGATCTTCTCATTGGAAGCC +
Preference number: 2 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRAGSPKI*IFSLEA
Trigger: GGCTTCCAATGAGAAGATGCAGATCTTGGGAGAGCC...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCAAACATGTTTTGGGCATaGCCACACTCTGGAAGTGGT +
Preference number: 2 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRANMFWA*PHSGSG
Trigger: ACCACTTCCAGAGTGTGGTCATGCCCAAAACATGTT...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCATTGGAAGCCTCTCACTaGAACAACTGTTCCTCCTGT +
Preference number: 2 (lower is better)
Translates to: APSTVSNWPELQALPRSALEASH*NNCSSC
Trigger: ACAGGAGGAACAGTTGTTTCAGTGAGAGGCTTCCAA...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCATTCCACCTCTTTTTCTaGAGGGTCCTGGCCAAGATA +
Preference number: 2 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRAFHLFF*RVLAKI
Trigger: TATCTTGGCCAGGACCCTGCAGAAAAAGAGGTGGAA...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR CAA 90 bp GAGACAGCAGGGACAGGTTCATTTGGCTTCTCCAGGTGCAGCAGCTaGAGTTTGCTCTTTGGCCCTGATGCTCCAGTCTGGTTCTTAATC +
Preference number: 2 (lower is better)
Translates to: ETAGTGSFGFSRCSS*SLLFGPDAPVWFLI
Trigger: GATTAAGAACCAGACTGGAGCATCAGGGCCAAAGAGCAAACTCAAGCTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTGCTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTCGGCACAGGGTGGACTaGGGGGCGTCTCGCTTTTCT +
Preference number: 2 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGRHRVD*GASRFS
Trigger: AGAAAAGCGAGACGCCCCTCAGTCCACCCTGTGCCG...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGATTTGCTTTTTCCACTaGAGACACGCCGGCCAGCGT +
Preference number: 2 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVICFFH*RHAGQR
Trigger: ACGCTGGCCGGCGTGTCTTCAGTGGAAAAAGCAAAT...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCAATCCGGTGTTCCATGTaGATGACAGAACACGGAATA +
Preference number: 2 (lower is better)
Translates to: APSTVSNWPELQALPRSAIRCSM*MTEHGI
Trigger: TATTCCGTGTTCTGTCATTCACATGGAACACCGGAT...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp AAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTTGATATCCAGAGAGAAGGGCACGCTGGCGGGATaGACGGGCCTTTGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: KDAAMLAEYETDLISREKGTLAG*TGLCPA
Trigger: AGCAGGACAAAGGCCCGTGCATCCCGCCAGCGTGCC...CTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTGACTTCGTGAGGTGCTaGTGGCTGGTGGAAAGGCCG +
Preference number: 2 (lower is better)
Translates to: QVSFFSGDLNDFHAARKADFVRC*WLVERP
Trigger: CGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTC...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCACCACCCCCAAAAAGCTaGTGTTGTGAATTAAGGCTT +
Preference number: 2 (lower is better)
Translates to: APSTVSNWPELQALPRSAPPPKS*CCELRL
Trigger: AAGCCTTAATTCACAACAGCAGCTTTTTGGGGGTGG...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CCA 90 bp TTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACTAGGATGCTGCCATGCTaGCTGAATATGAAACTGATT +
Preference number: 2 (lower is better)
Translates to: LVSASGQLAAAVGRVTGTRMLPC*LNMKLI
Trigger: AATCAGTTTCATATTCAGCCAGCATGGCAGCATCCT...AGTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTGGCTGTCTGAAGGCCTaGCGGTCTGCAGCTTCTTGG +
Preference number: 2 (lower is better)
Translates to: QVSFFSGDLNDFHAARKAGCLKA*RSAASW
Trigger: CCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCC...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTGTCTTCCAGCCTGTCTaGGGACAGGTGCAGCCCACT +
Preference number: 2 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGVFQPV*GQVQPT
Trigger: AGTGGGCTGCACCTGTCCGCAGACAGGCTGGAAGAC...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTGACTTCGTGAGGTGCTaGTGGCTGGTGGAAAGGCCG +
Preference number: 2 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGDFVRC*WLVERP
Trigger: CGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTC...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTGCAGACTTCGTGAGGTaGTGCTGGCTGGTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: QVSFFSGDLNDFHAARKAADFVR*CWLVER
Trigger: CCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGC...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTGCCAAGATATCCGAGTaGCAGCCCTTAAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: QVSFFSGDLNDFHAARKAAKISE*QPLRPR
Trigger: CCTGGGCCTTAAGGGCTGGCACTCGGATATCTTGGC...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCACCCACGGGAATTTTGTaGATAGACAGTTTGAATTGG +
Preference number: 2 (lower is better)
Translates to: APSTVSNWPELQALPRSAPTGIL*IDSLNW
Trigger: CCAATTCAAACTGTCTATGCACAAAATTCCCGTGGG...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CCA 90 bp GATATCCAGAGAGAAGGAACGCTTGAGCTTATTGCTGTCTTCCAGCCTGTCTGCAGGGACAGGTTCATTTaGCTTCTCCAGGTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: DIQREGTLELIAVFQPVCRDRFI*LLQVQQ
Trigger: CTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCT...GCAGACAGGCTGGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCTGGATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTGATAAAAGGGACCTCTaGGCGGTGCCACTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: QVSFFSGDLNDFHAARKADKRDL*AVPLLL
Trigger: CAGCAGCAGTGGCACCGCCCAGAGGTCCCTTTTATC...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTCTTGGTCTCCGCAAGTaGGCAGCTGGCTGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGLGLRK*AAGCSC
Trigger: ACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTTTTCTGTCCACCCTCTaGGACAGCAGGGACAGGTTC +
Preference number: 2 (lower is better)
Translates to: QVSFFSGDLNDFHAARKAFLSTL*DSRDRF
Trigger: GAACCTGTCCCTGCTGTCTCAGAGGGTGGACAGAAA...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCAGAGAGAAGTATTAGCTaGTCTCTCAAATGCAGATGT +
Preference number: 2 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRAERSIS*SLKCRC
Trigger: ACATCTGCATTTGAGAGATCAGCTAATACTTCTCTC...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTCCCTCGGCTGTCAGGTaGGCGTGGGTTTGTGAATCA +
Preference number: 2 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGPSAVR*AWVCES
Trigger: TGATTCACAAACCCACGCTCACCTGACAGCCGAGGG...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCAGTCCGTCCAGCAGAGTaGTGCTCGTGTCCCTCGGCT +
Preference number: 2 (lower is better)
Translates to: ETSLARSYCFPFLNMFWAVRPAE*CSCPSA
Trigger: AGCCGAGGGACACGAGCATCACTCTGCTGGACGGAC...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGTCCATTGGAGGCTTTTaGTTTCTCAATGAAATCTAC +
Preference number: 2 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLSIGGF*FLNEIY
Trigger: GTAGATTTCATTGAGAAAGCAAAAGCCTCCAATGGA...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp AAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTTGATATCCAGAGAGAAGTTGTCCTGCTGCCTCTaGGGTAGCAGAGTCGGCACA +
Preference number: 2 (lower is better)
Translates to: KDAAMLAEYETDLISREKLSCCL*GSRVGT
Trigger: TGTGCCGACTCTGCTACCTCAGAGGCAGCAGGACAA...CTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCAGGATGTGTAATTCACTaGATAAAATGGTTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: APSTVSNWPELQALPRSAGCVIH*IKWFSS
Trigger: GGAGGAAAACCATTTTATTCAGTGAATTACACATCC...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTCAGGGTCTACCTACCTaGCCCCCAAGCTGGCTCAGT +
Preference number: 2 (lower is better)
Translates to: PPETSLARSYCFPFLNMFQGLPT*PPSWLS
Trigger: ACTGAGCCAGCTTGGGGGTCAGGTAGGTAGACCCTG...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTCCCTCGGCTGTCAGGTaGGCGTGGGTTTGTGAATCA +
Preference number: 2 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSPSAVR*AWVCES
Trigger: TGATTCACAAACCCACGCTCACCTGACAGCCGAGGG...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTGAAGGGAAAGAACAATaGCAACACCCGCCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSEGKEQ*QHPPSP
Trigger: GGGGCTGGGCGGGTGTTGTCATTGTTCTTTCCCTTC...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGAAAGGCTGTAGGATGTaGCTACATCACAGTTCCAGA +
Preference number: 2 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVKGCRM*LHHSSR
Trigger: TCTGGAACTGTGATGTAGTCACATCCTACAGCCTTT...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTCTGGTTCTGACCGAATaGAATCGCTTGCTCTGGCTG +
Preference number: 2 (lower is better)
Translates to: QVSFFSGDLNDFHAARKALVLTE*NRLLWL
Trigger: CAGCCAGAGCAAGCGATTGCATTCGGTCAGAACCAG...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTCACTGCCTCCGTAGATaGCTGAGGCAGAGTAGAAGT +
Preference number: 2 (lower is better)
Translates to: QVSFFSGDLNDFHAARKAHCLRR*LRQSRS
Trigger: ACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTG...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CAA 90 bp GGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTaGGATTTACCACTAGGCTCTGTCCCTAACAGGGTCTACCTACCT +
Preference number: 2 (lower is better)
Translates to: GERGFVNQLWIGSFL*DLPLGSVPNRVYLP
Trigger: AGGTAGGTAGACCCTGTTAGGGACAGAGCCTAGTGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGACAGTGATTGTAGGTTaGGGACTGAGGACGCCCCTT +
Preference number: 2 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQTVIVG*GLRTPL
Trigger: AAGGGGCGTCCTCAGTCCTCAACCTACAATCACTGT...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGACTAACTCAAATCGTTaGCCAGCACTTTCCCAGTAT +
Preference number: 2 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVTNSNR*PALSQY
Trigger: ATACTGGGAAAGTGCTGGTCAACGATTTGAGTTAGT...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTTTTGGCTTCTCCAGGTaGAGCAGCTTGAGTTTGCTC +
Preference number: 2 (lower is better)
Translates to: QVSFFSGDLNDFHAARKAFGFSR*SSLSLL
Trigger: GAGCAAACTCAAGCTGCTGCACCTGGAGAAGCCAAA...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp ATTAAAACCAAGTCCCCCAAACCTCCTGAAACATCGTTAGCAAGGAGCTACTGCCTGAGGTACTGGGTTTaGTCTAAGGTAGACCTTGGC +
Preference number: 2 (lower is better)
Translates to: IKTKSPKPPETSLARSYCLRYWV*SKVDLG
Trigger: GCCAAGGTCTACCTTAGAGCAAACCCAGTACCTCAG...GCAGTAGCTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGACTTGGTTTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp ATTAAAACCAAGTCCCCCAAACCTCCTGAAACATCGTTAGCAAGGAGCTACTGCCTGAGGACGCCCCTTTaGTCTCGCTCCATTTTGATT +
Preference number: 2 (lower is better)
Translates to: IKTKSPKPPETSLARSYCLRTPL*SRSILI
Trigger: AATCAAAATGGAGCGAGAGCAAAGGGGCGTCCTCAG...GCAGTAGCTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGACTTGGTTTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTGCTTCTTGGGGATGCTaGCTTCCTCCTTATCAGGAC +
Preference number: 2 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGASWGC*LPPYQD
Trigger: GTCCTGATAAGGAGGAAGCCAGCATCCCCAAGAAGC...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp GATATCCAGAGAGAAGGAACGCTTGAGCTTATTGCTGTCTTCCAGCCTGTCTGCCTCAATGAAATCTACTaGTTTGTCCAACCACGGCAA +
Preference number: 2 (lower is better)
Translates to: DIQREGTLELIAVFQPVCLNEIY*FVQPRQ
Trigger: TTGCCGTGGTTGGACAAATCAGTAGATTTCATTGAG...GCAGACAGGCTGGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCTGGATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp AAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTTGATATCCAGAGAGAAGTTTGCTCTTTGGCCCTaGTGCTCCAGTCTGGTTCTT +
Preference number: 2 (lower is better)
Translates to: KDAAMLAEYETDLISREKFALWP*CSSLVL
Trigger: AAGAACCAGACTGGAGCATCAGGGCCAAAGAGCAAA...CTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp ATTAAAACCAAGTCCCCCAAACCTCCTGAAACATCGTTAGCAAGGAGCTACTGCGCTTGGCCATGGCTTTaGACTCTATTCACAACTGAT +
Preference number: 2 (lower is better)
Translates to: IKTKSPKPPETSLARSYCAWPWL*TLFTTD
Trigger: ATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGC...GCAGTAGCTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGACTTGGTTTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTCCTCCTATGTTCAGCTaGCAGGACCGATTCCATACA +
Preference number: 2 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSPPMFS*QDRFHT
Trigger: TGTATGGAATCGGTCCTGGCAGCTGAACATAGGAGG...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR CAA 90 bp AAGCCATGTAAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTaGATATCCAGAGAGAAGGAACGCTTGAGCTTATTGCTGTCTTCC +
Preference number: 2 (lower is better)
Translates to: KPCKDAAMLAEYETD*ISREKERLSLLLSS
Trigger: GGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTTACATGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCACTTTGGCTGAGAATTTaGAGGTGCTGCTGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: ETSLARSYCFPFLNMFWALWLRI*RCCCSA
Trigger: AGCAGAGCAGCAGCACCTTCAAATTCTCAGCCAAAG...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATGTCCCCCAAACCTCCTaGAACATCGTTAGCAAGGAG +
Preference number: 2 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNVPQTS*NIVSKE
Trigger: CTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGAC...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGTCCATTGGAGGCTTTTaGTTTCTCAATGAAATCTAC +
Preference number: 2 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSESIGGF*FLNEIY
Trigger: GTAGATTTCATTGAGAAAGCAAAAGCCTCCAATGGA...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTATCCCAGCTAAACAGTaGACTAGAACACATCCATTG +
Preference number: 2 (lower is better)
Translates to: QVSFFSGDLNDFHAARKAIPAKQ*TRTHPL
Trigger: CAATGGATGTGTTCTAGTGCACTGTTTAGCTGGGAT...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTGGGGATTCTAGCATCTaGCCTTCCATTTTTGTTGAG +
Preference number: 2 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGGDSSI*PSIFVE
Trigger: CTCAACAAAAATGGAAGGGCAGATGCTAGAATCCCC...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
3UTR-3UTR GCA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGGCTTGGCCATGGCTTTaGACTCTATTCACAACTGAT +
Preference number: 2 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQAWPWL*TLFTTD
Trigger: ATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGC...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATTCCTGGTGGTTCAGCTaGATCCTAGACAGTTTCCCT +
Preference number: 2 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNSWWFS*ILDSFP
Trigger: AGGGAAACTGTCTAGGATTCAGCTGAACCACCAGGA...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTACAGTGATTGTAGGTTaGGGACTGAGGACGCCCCTT +
Preference number: 2 (lower is better)
Translates to: TSTQPTSRSPVILSVVNITVIVG*GLRTPL
Trigger: AAGGGGCGTCCTCAGTCCTCAACCTACAATCACTGT...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATGAGCAGAGAGGTTGTTaGGATGTATGTGGCAAGGAC +
Preference number: 2 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNEQRGC*DVCGKD
Trigger: GTCCTTGCCACATACATCTCAACAACCTCTCTGCTC...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCACTCAATGAAATCTACTaGTTTGTCCAACCACGGCAA +
Preference number: 2 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPLNEIY*FVQPRQ
Trigger: TTGCCGTGGTTGGACAAATCAGTAGATTTCATTGAG...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR TCA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCACAAGTCGGTCTGTGTTaGGTCATATCATTCTGTGCT +
Preference number: 2 (lower is better)
Translates to: ETSLARSYCFPFLNMFWAQVGLC*VISFCA
Trigger: AGCACAGAATGATATGACTCAACACAGACCGACTTG...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTTCAAATCTAGTGTCATaGGCAGAGAGGTTGTTGAGA +
Preference number: 2 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSSNLVS*AERLLR
Trigger: TCTCAACAACCTCTCTGCTCATGACACTAGATTTGA...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp AAAACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGTACCAACTGTATCCATaGAGTGAAGCAGAAAGGGCA +
Preference number: 2 (lower is better)
Translates to: KTAWPWLCTLFTTDQNSMYQLYP*SEAERA
Trigger: TGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTA...CATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCATACCAACTGTATCCATaGAGTGAAGCAGAAAGGGCA +
Preference number: 2 (lower is better)
Translates to: ETSLARSYCFPFLNMFWAYQLYP*SEAERA
Trigger: TGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTA...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTAAAACAGCTTGGCCATaGCTTTGCACTCTATTCACA +
Preference number: 2 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSKTAWP*LCTLFT
Trigger: TGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGGTAAATGTGAAAGTCTaGGGCAATCATAGAAACATC +
Preference number: 2 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQVNVKV*GNHRNI
Trigger: GATGTTTCTATGATTGCCTCAGACTTTCACATTTAC...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTAAGAGAAGCCCTAAATaGCAGAAGCTCATTAAAACC +
Preference number: 2 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSKRSPK*QKLIKT
Trigger: GGTTTTAATGAGCTTCTGTCATTTAGGGCTTCTCTT...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATGGGGATTCTAGCATCTaGCCTTCCATTTTTGTTGAG +
Preference number: 2 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNGDSSI*PSIFVE
Trigger: CTCAACAAAAATGGAAGGGCAGATGCTAGAATCCCC...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTAGGAAACAGGTTTCCTaGTTCTCCTCAGCAATTTGT +
Preference number: 2 (lower is better)
Translates to: PPETSLARSYCFPFLNMFRKQVS*FSSAIC
Trigger: ACAAATTGCTGAGGAGAAGCAGGAAACCTGTTTCCT...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTAAAACAGCTTGGCCATaGCTTTGCACTCTATTCACA +
Preference number: 2 (lower is better)
Translates to: PPETSLARSYCFPFLNMFKTAWP*LCTLFT
Trigger: TGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATCCCACGGGAATTTTGTaGATAGACAGTTTGAATTGG +
Preference number: 2 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNPTGIL*IDSLNW
Trigger: CCAATTCAAACTGTCTATGCACAAAATTCCCGTGGG...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATAGGAAACAGGTTTCCTaGTTCTCCTCAGCAATTTGT +
Preference number: 2 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNRKQVS*FSSAIC
Trigger: ACAAATTGCTGAGGAGAAGCAGGAAACCTGTTTCCT...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATGAGAGAAGTATTAGCTaGTCTCTCAAATGCAGATGT +
Preference number: 2 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNERSIS*SLKCRC
Trigger: ACATCTGCATTTGAGAGATCAGCTAATACTTCTCTC...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTACTAACTCAAATCGTTaGCCAGCACTTTCCCAGTAT +
Preference number: 2 (lower is better)
Translates to: TSTQPTSRSPVILSVVNITNSNR*PALSQY
Trigger: ATACTGGGAAAGTGCTGGTCAACGATTTGAGTTAGT...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATAAGAGAAGCCCTAAATaGCAGAAGCTCATTAAAACC +
Preference number: 2 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNKRSPK*QKLIKT
Trigger: GGTTTTAATGAGCTTCTGTCATTTAGGGCTTCTCTT...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATCTCGATTCCAAGAACTaGTTATCTGACACTAGTGAA +
Preference number: 2 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNLDSKN*LSDTSE
Trigger: TTCACTAGTGTCAGATAATCAGTTCTTGGAATCGAG...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTCCTACCTATTCACAATaGCTAGAAAATGGGCTACCA +
Preference number: 2 (lower is better)
Translates to: TSTQPTSRSPVILSVVNIPTYSQ*LENGLP
Trigger: TGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGG...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR GCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTATAGCACATTATTTGTaGACAACTAGTGAGGTCTGT +
Preference number: 2 (lower is better)
Translates to: PPETSLARSYCFPFLNMFIAHYL*TTSEVC
Trigger: ACAGACCTCACTAGTTGTGCACAAATAATGTGCTAT...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR TCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATCACTCTATTCACAACTaGTCAAAACTCAATGGTCTT +
Preference number: 2 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNHSIHN*SKLNGL
Trigger: AAGACCATTGAGTTTTGATCAGTTGTGAATAGAGTG...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR CCA 72 bp CCAGCGGGCTGTCCTCTAACAGCGACGGCTGCACGCTaGGCACGCTGGGCACGCTGGCGGGATGCACGGGCC +
Preference number: 3 (lower is better)
Translates to: PAGCPLTATAAR*ARWARWRDARA
Trigger: GGCCCGTGCATCCCGCCAGCGTGCCCAGCGTGCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 72 bp GCCTGTACCAGCGGGCTGTCCTCTAACAGCGACGGCTaGACGCTGGGCACGCTGGGCACGCTGGCGGGATGC +
Preference number: 3 (lower is better)
Translates to: ACTSGLSSNSDG*TLGTLGTLAGC
Trigger: GCATCCCGCCAGCGTGCCCAGCGTGCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 72 bp TGTCCTCTAACAGCGACGGCTGCACGCTGGGCACGCTaGGCACGCTGGCGGGATGCACGGGCCTTTGTCCTG +
Preference number: 3 (lower is better)
Translates to: CPLTATAARWAR*ARWRDARAFVL
Trigger: CAGGACAAAGGCCCGTGCATCCCGCCAGCGTGCCCAGCGTGCCCAGCGTGCAGCCGTCGCTGTTAGAGGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR TCA 72 bp TGTCTTCCAGCCTGTCTGCGGACAGGTGCAGCCCACTaGGCGCCTGTACCAGCGGGCTGTCCTCTAACAGCG +
Preference number: 3 (lower is better)
Translates to: CLPACLRTGAAH*APVPAGCPLTA
Trigger: CGCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAGTGGGCTGCACCTGTCCGCAGACAGGCTGGAAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 72 bp AGCTTATTGCTGTCTTCCAGCCTGTCTGCGGACAGGTaGAGCCCACTGAGCGCCTGTACCAGCGGGCTGTCC +
Preference number: 3 (lower is better)
Translates to: SLLLSSSLSADR*SPLSACTSGLS
Trigger: GGACAGCCCGCTGGTACAGGCGCTCAGTGGGCTGCACCTGTCCGCAGACAGGCTGGAAGACAGCAATAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 72 bp CTCTGGGCGGTGCCACTGCTGCTGGTTCTGACCGAATaGAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCG +
Preference number: 3 (lower is better)
Translates to: LWAVPLLLVLTE*NRLLWLSEGLA
Trigger: CGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGGTCAGAACCAGCAGCAGTGGCACCGCCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 72 bp CCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTaGTGGCTGGTGGAAAGGCCGAAAAGGAAGCTGGTG +
Preference number: 3 (lower is better)
Translates to: PLRPRPADFVRC*WLVERPKRKLV
Trigger: CACCAGCTTCCTTTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 72 bp CAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTaGTGCTGGCTGGTGGAAAGGCCGAAAAGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: QPLRPRPADFVR*CWLVERPKRKL
Trigger: CAGCTTCCTTTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 72 bp GCCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTaGGCACAGAATAGACTTGGTCTCCGCAAGTGGGCA +
Preference number: 3 (lower is better)
Translates to: AASQLCHLASAA*AQNRLGLRKWA
Trigger: TGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 72 bp GCCGCCTGCGCACAGAATAGACTTGGTCTCCGCAAGTaGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGG +
Preference number: 3 (lower is better)
Translates to: AACAQNRLGLRK*AAGCSCRQSNW
Trigger: CCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGCAGGCGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 72 bp TTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTaGCTGGTGGAAAGGCCGAAAAGGAAGCTGGTGTGG +
Preference number: 3 (lower is better)
Translates to: LRPRPADFVRCC*LVERPKRKLVW
Trigger: CCACACCAGCTTCCTTTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 72 bp TTCATGCCAGCTCCGCCGCGAGTCAGCTCTGTCACTTaGCTTCTGCCGCCTGCGCACAGAATAGACTTGGTC +
Preference number: 3 (lower is better)
Translates to: FMPAPPRVSSVT*LLPPAHRIDLV
Trigger: GACCAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGAGCTGGCATGAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp TCCGCCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGAACCGAATGCAATCGCTaGCTCTGGCTGTCTGAAGGC +
Preference number: 3 (lower is better)
Translates to: SAASQLCHLASAACAQNRTECNR*LWLSEG
Trigger: GCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGGT...TCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp TGCAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTGGGGTGCAGCAGCTTGAGTTaGCTCTTTGGCCCTGATGCT +
Preference number: 3 (lower is better)
Translates to: CNRLLWLSEGLAVCSFLGCSSLS*LFGPDA
Trigger: AGCATCAGGGCCAAAGAGCAAACTCAAGCTGCTGCA...CCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGTCCAGGTGCAGCAGCTaGAGTTTGCTCTTTGGCCCT +
Preference number: 3 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLSRCSS*SLLFGP
Trigger: AGGGCCAAAGAGCAAACTCAAGCTGCTGCACCTGGA...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp TTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACTTCCAGGTGCAGCAGCTaGAGTTTGCTCTTTGGCCCT +
Preference number: 3 (lower is better)
Translates to: LVSASGQLAAAVGRVTGTSRCSS*SLLFGP
Trigger: AGGGCCAAAGAGCAAACTCAAGCTGCTGCACCTGGA...AGTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR TCA 72 bp AAAGGGACCTCTGGGCGGTGCCACTGCTGCTGGTTCTaGCCGAATGCAATCGCTTGCTCTGGCTGTCTGAAG +
Preference number: 3 (lower is better)
Translates to: KGTSGRCHCCWF*PNAIACSGCLK
Trigger: CTTCAGACAGCCAGAGCAAGCGATTGCATTCGGTCAGAACCAGCAGCAGTGGCACCGCCCAGAGGTCCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 72 bp GCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACTaGCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTG +
Preference number: 3 (lower is better)
Translates to: AAGCSCRQSNWH*LRRWLRQSRSV
Trigger: CACACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 72 bp CAGAATAGACTTGGTCTCCGCAAGTGGGCAGCTGGCTaGAGCTGTAGGCAGAGTAACTGGCACTGCCTCCGT +
Preference number: 3 (lower is better)
Translates to: QNRLGLRKWAAG*SCRQSNWHCLR
Trigger: ACGGAGGCAGTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAGTCTATTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 72 bp CTGCTGCTGGTTCTGACCGAATGCAATCGCTTGCTCTaGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTG +
Preference number: 3 (lower is better)
Translates to: LLLVLTECNRLL*LSEGLAVCSFL
Trigger: CAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGGTCAGAACCAGCAGCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 72 bp CTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTaGGCGGTGCCACTGCTGCTGGTTCTGACCGAATGC +
Preference number: 3 (lower is better)
Translates to: LPLRCSGDKRDL*AVPLLLVLTEC
Trigger: GCATTCGGTCAGAACCAGCAGCAGTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 72 bp AAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTaGCACTGCCTCCGTAGATGGCTGAGGCAGAGTAGA +
Preference number: 3 (lower is better)
Translates to: KWAAGCSCRQSN*HCLRRWLRQSR
Trigger: TCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp CTTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACAACTGGCATAGCTTGTaGGTCCCATCCAGAGTAGTG +
Preference number: 3 (lower is better)
Translates to: LGLRKWAAGCSCRQSNWHNWHSL*VPSRVV
Trigger: CACTACTCTGGATGGGACCAACAAGCTATGCCAGTT...GTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR TCA 72 bp TGGACTGAGGGGCGTCTCGCTTTTCTGTCCACCCTCTaGGACAGCAGGGACAGGTTCATTTGGCTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: WTEGRLAFLSTL*DSRDRFIWLLQ
Trigger: CTGGAGAAGCCAAATGAACCTGTCCCTGCTGTCTCAGAGGGTGGACAGAAAAGCGAGACGCCCCTCAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 72 bp GCTGGTCATGAAGGGGCTCCGAGCACTGTCAGCAACTaGCCTGAACTTCAGGCTCTCCCAAGATCTGCATCT +
Preference number: 3 (lower is better)
Translates to: AGHEGAPSTVSN*PELQALPRSAS
Trigger: AGATGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGCCCCTTCATGACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CAA 90 bp TCCGCCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGAAGAGAGAAGGAACGCTaGAGCTTATTGCTGTCTTCC +
Preference number: 3 (lower is better)
Translates to: SAASQLCHLASAACAQNRREKER*SLLLSS
Trigger: GGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCT...TCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACAGAGAGAAGGAACGCTaGAGCTTATTGCTGTCTTCC +
Preference number: 3 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHREKER*SLLLSS
Trigger: GGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCT...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCAGCTTTGGCTGAGAATTaGAAGGTGCTGCTGCTCTGC +
Preference number: 3 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRAALAEN*KVLLLC
Trigger: GCAGAGCAGCAGCACCTTCAAATTCTCAGCCAAAGC...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR GCA 72 bp CTGCGTTTAAACTGCTTTTCAAAGGGGCTCTCTTCATaGCAGCTCCGCCGCGAGTCAGCTCTGTCACTTGGC +
Preference number: 3 (lower is better)
Translates to: LRLNCFSKGLSS*QLRRESALSLG
Trigger: GCCAAGTGACAGAGCTGACTCGCGGCGGAGCTGGCATGAAGAGAGCCCCTTTGAAAAGCAGTTTAAACGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 72 bp AGCTGTAGGCAGAGTAACTGGCACTGCCTCCGTAGATaGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGG +
Preference number: 3 (lower is better)
Translates to: SCRQSNWHCLRR*LRQSRSVRTLW
Trigger: CCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCAGTTACTCTGCCTACAGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR TCA 72 bp TCAGGACTGGTTTCGGGAGTCTGCTCCGATAGTTCCTaGACAGGGGAGAACTGGCATAGCTTGTTGGTCCCA +
Preference number: 3 (lower is better)
Translates to: SGLVSGVCSDSS*TGENWHSLLVP
Trigger: TGGGACCAACAAGCTATGCCAGTTCTCCCCTGTTCAGGAACTATCGGAGCAGACTCCCGAAACCAGTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR TCA 72 bp ACCTCAATGATTTCCATGCTGCCCGAAAAGCTAGACTaGCTGCCCACTTTCCCCAGCTCTTCCCGTGACCTG +
Preference number: 3 (lower is better)
Translates to: TSMISMLPEKLD*LPTFPSSSRDL
Trigger: CAGGTCACGGGAAGAGCTGGGGAAAGTGGGCAGTCAGTCTAGCTTTTCGGGCAGCATGGAAATCATTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR TCA 72 bp AGCTGCCAGGACCGATTCCATACAGTGATTGTAGGTTaGGGACTGAGGACGCCCCTTTGCTCTCGCTCCATT +
Preference number: 3 (lower is better)
Translates to: SCQDRFHTVIVG*GLRTPLCSRSI
Trigger: AATGGAGCGAGAGCAAAGGGGCGTCCTCAGTCCTCAACCTACAATCACTGTATGGAATCGGTCCTGGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR GCA 72 bp GAGACAGCAGGGACAGGTTCATTTGGCTTCTCCAGGTaGAGCAGCTTGAGTTTGCTCTTTGGCCCTGATGCT +
Preference number: 3 (lower is better)
Translates to: ETAGTGSFGFSR*SSLSLLFGPDA
Trigger: AGCATCAGGGCCAAAGAGCAAACTCAAGCTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTGCTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CCA 72 bp GCTTCTTGGGGATGCTGGCTTCCTCCTTATCAGGACTaGTTTCGGGAGTCTGCTCCGATAGTTCCTGAACAG +
Preference number: 3 (lower is better)
Translates to: ASWGCWLPPYQD*FRESAPIVPEQ
Trigger: CTGTTCAGGAACTATCGGAGCAGACTCCCGAAACCAGTCCTGATAAGGAGGAAGCCAGCATCCCCAAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp TCGGCACAGGGTGGACTGAGGGGCGTCTCGCTTTTCTGTCCACCCTCTGAGACAACTAGAACACATCCATaGGAGGCTTTTGCTTTCTCA +
Preference number: 3 (lower is better)
Translates to: SAQGGLRGVSLFCPPSETTRTHP*EAFAFS
Trigger: TGAGAAAGCAAAAGCCTCCAATGGATGTGTTCTAGT...TGTCTCAGAGGGTGGACAGAAAAGCGAGACGCCCCTCAGTCCACCCTGTGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp TCCGCCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGAACTAGAACACATCCATaGGAGGCTTTTGCTTTCTCA +
Preference number: 3 (lower is better)
Translates to: SAASQLCHLASAACAQNRTRTHP*EAFAFS
Trigger: TGAGAAAGCAAAAGCCTCCAATGGATGTGTTCTAGT...TCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR GCA 72 bp TCAAAGCCCCGACTTTCCTGTCTGAGGTACTGGGTTTaGTCTAAGGTAGACCTTGGCAAGGCCCCTAATGGT +
Preference number: 3 (lower is better)
Translates to: SKPRLSCLRYWV*SKVDLGKAPNG
Trigger: ACCATTAGGGGCCTTGCCAAGGTCTACCTTAGAGCAAACCCAGTACCTCAGACAGGAAAGTCGGGGCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp GATATCCAGAGAGAAGGAACGCTTGAGCTTATTGCTGTCTTCCAGCCTGTCTGCCAGGGACAGGTTCATTaGGCTTCTCCAGGTGCAGCA +
Preference number: 3 (lower is better)
Translates to: DIQREGTLELIAVFQPVCQGQVH*ASPGAA
Trigger: TGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTG...GCAGACAGGCTGGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCTGGATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGCAGGGACAGGTTCATTaGGCTTCTCCAGGTGCAGCA +
Preference number: 3 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEQGQVH*ASPGAA
Trigger: TGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTG...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR TCA 72 bp CTTTCCCCAGCTCTTCCCGTGACCTGTTCTCTGACATaGTGCTCTCTCCAAATTCCATTTGGCAGCTTCTGC +
Preference number: 3 (lower is better)
Translates to: LSPALPVTCSLT*CSLQIPFGSFC
Trigger: GCAGAAGCTGCCAAATGGAATTTGGAGAGAGCATCATGTCAGAGAACAGGTCACGGGAAGAGCTGGGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR TCA 72 bp CCACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTaGTTATCTGACACTAGTGAACCAGCACTAAAGGCT +
Preference number: 3 (lower is better)
Translates to: PPLRHGSLDSKN*LSDTSEPALKA
Trigger: AGCCTTTAGTGCTGGTTCACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR CCA 72 bp AGGTTTCACCACTGCCTCCTTTGGCAACTTGAGTGGTaGTGTTCCCACCGAGTTTATGGCTGCAAAGATAGG +
Preference number: 3 (lower is better)
Translates to: RFHHCLLWQLEW*CSHRVYGCKDR
Trigger: CCTATCTTTGCAGCCATAAACTCGGTGGGAACACCACCACTCAAGTTGCCAAAGGAGGCAGTGGTGAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CAA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGATGAAATCTACTGATTaGTCCAACCACGGCAAAATT +
Preference number: 3 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLMKSTD*SNHGKI
Trigger: AATTTTGCCGTGGTTGGACAAATCAGTAGATTTCAT...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGGAACGCTTGAGCTTATaGCTGTCTTCCAGCCTGTCT +
Preference number: 3 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEERLSL*LSSSLS
Trigger: AGACAGGCTGGAAGACAGCAATAAGCTCAAGCGTTC...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCAATAGGATCATTTCTCTaGGATTTACCACTAGGCTCT +
Preference number: 3 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRAIGSFL*DLPLGS
Trigger: AGAGCCTAGTGGTAAATCCAAGAGAAATGATCCTAT...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CAA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCAATCATAGCACATTATTaGTGCACAACTAGTGAGGTC +
Preference number: 3 (lower is better)
Translates to: APSTVSNWPELQALPRSAIIAHY*CTTSEV
Trigger: GACCTCACTAGTTGTGCACAAATAATGTGCTATGAT...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR CCA 72 bp CTGAAGACACGCCGGCCAGCGTTTCCAAAAACAGCTTaGCCATGGCTTTGCACTCTATTCACAACTGATCAA +
Preference number: 3 (lower is better)
Translates to: LKTRRPAFPKTA*PWLCTLFTTDQ
Trigger: TTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTTTGGAAACGCTGGCCGGCGTGTCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR GCA 72 bp GCCTTCACTTTACACCCCATCATAGCACATTATTTGTaGACAACTAGTGAGGTCTGTGCGGCTCATCATCCC +
Preference number: 3 (lower is better)
Translates to: AFTLHPIIAHYL*TTSEVCAAHHP
Trigger: GGGATGATGAGCCGCACAGACCTCACTAGTTGTGCACAAATAATGTGCTATGATGGGGTGTAAAGTGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR CCA 72 bp GTGACTACATCACAGTTCCAGAAGGAAGGGGGACCATaGCCAAGAGAAGCCCTAAATGACAGAAGCTCATTA +
Preference number: 3 (lower is better)
Translates to: VTTSQFQKEGGP*PREALNDRSSL
Trigger: TAATGAGCTTCTGTCATTTAGGGCTTCTCTTGGCCATGGTCCCCCTTCCTTCTGGAACTGTGATGTAGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CAA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGCTCATAGTCCAGGAGTaGGCCCAGAAAATTGAAGTT +
Preference number: 3 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSELIVQE*AQKIEV
Trigger: AACTTCAATTTTCTGGGCCAACTCCTGGACTATGAG...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTTGCAGCAGCTTGAGTTaGCTCTTTGGCCCTGATGCT +
Preference number: 3 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGCSSLS*LFGPDA
Trigger: AGCATCAGGGCCAAAGAGCAAACTCAAGCTGCTGCA...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp GAGACAGCAGGGACAGGTTCATTTGGCTTCTCCAGGTGCAGCAGCTTGAGTTTGATGAAATCTACTGATTaGTCCAACCACGGCAAAATT +
Preference number: 3 (lower is better)
Translates to: ETAGTGSFGFSRCSSLSLMKSTD*SNHGKI
Trigger: AATTTTGCCGTGGTTGGACAAATCAGTAGATTTCAT...CAAACTCAAGCTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTGCTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTAACTGGCATAGCTTGTaGGTCCCATCCAGAGTAGTG +
Preference number: 3 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGNWHSL*VPSRVV
Trigger: CACTACTCTGGATGGGACCAACAAGCTATGCCAGTT...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp ATTAAAACCAAGTCCCCCAAACCTCCTGAAACATCGTTAGCAAGGAGCTACTGCCCAAGTCGGTCTGTGTaGAGTCATATCATTCTGTGC +
Preference number: 3 (lower is better)
Translates to: IKTKSPKPPETSLARSYCPSRSV*SHIILC
Trigger: GCACAGAATGATATGACTCAACACAGACCGACTTGG...GCAGTAGCTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGACTTGGTTTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR TCA 72 bp AAGCCTCTCTCAGCCCTACTAGTAAATGTGAAAGTCTaGGGCAATCATAGAAACATCAGCCCCATCGCATGC +
Preference number: 3 (lower is better)
Translates to: KPLSALLVNVKV*GNHRNISPIAC
Trigger: GCATGCGATGGGGCTGATGTTTCTATGATTGCCTCAGACTTTCACATTTACTAGTAGGGCTGAGAGAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR TCA 72 bp TGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGTaGCCTCCTATGTTCAGCTGCCAGGACCGATTCCAT +
Preference number: 3 (lower is better)
Translates to: CLKANLHYHLFQ*PPMFSCQDRFH
Trigger: ATGGAATCGGTCCTGGCAGCTGAACATAGGAGGTCACTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR TCA 72 bp GCGGCTCATCATCCCCATAACCAAGTCGGTCTGTGTTaGGTCATATCATTCTGTGCTGGTTTTAGAAGTCAC +
Preference number: 3 (lower is better)
Translates to: AAHHPHNQVGLC*VISFCAGFRSH
Trigger: GTGACTTCTAAAACCAGCACAGAATGATATGACTCAACACAGACCGACTTGGTTATGGGGATGATGAGCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CAA 90 bp AAAACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGCTTTGGCTGAGAATTaGAAGGTGCTGCTGCTCTGC +
Preference number: 3 (lower is better)
Translates to: KTAWPWLCTLFTTDQNSMALAEN*KVLLLC
Trigger: GCAGAGCAGCAGCACCTTCAAATTCTCAGCCAAAGC...CATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CAA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCATACAGTGATTGTAGGTaGAGGACTGAGGACGCCCCT +
Preference number: 3 (lower is better)
Translates to: ETSLARSYCFPFLNMFWAYSDCR*RTEDAP
Trigger: AGGGGCGTCCTCAGTCCTCAACCTACAATCACTGTA...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CAA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCAGGGTTGATCCACCTGTaGCTTTTACACCATAGCTCC +
Preference number: 3 (lower is better)
Translates to: ETSLARSYCFPFLNMFWAGLIHL*LLHHSS
Trigger: GGAGCTATGGTGTAAAAGCAACAGGTGGATCAACCC...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR TCA 72 bp CAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTaGAGGTGCTGCTGCTCTGCTACCAACCCAAATAAA +
Preference number: 3 (lower is better)
Translates to: QKGQKHLLWLRI*RCCCSATNPNK
Trigger: TTTATTTGGGTTGGTAGCAGAGCAGCAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CAA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTAGAGTAACAACTGGGTaGATCCACCTGTTGCTTTTA +
Preference number: 3 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGRVTTG*IHLLLL
Trigger: TAAAAGCAACAGGTGGATCAACCCAGTTGTTACTCT...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
3UTR-3UTR CAA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTGCAAAAACATCTGCTTaGGCTGAGAATTTGAAGGTG +
Preference number: 3 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGAKTSA*AENLKV
Trigger: CACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGC...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CAA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGGCAAAAACATCTGCTTaGGCTGAGAATTTGAAGGTG +
Preference number: 3 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQAKTSA*AENLKV
Trigger: CACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGC...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR TCA 72 bp AACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTaGTCAAAACTCAATGGTCTTCTCAGCTTTCTCAAC +
Preference number: 3 (lower is better)
Translates to: NSLAMALHSIHN*SKLNGLLSFLN
Trigger: GTTGAGAAAGCTGAGAAGACCATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR GCA 72 bp TTTCCCAGTATCATAACAATGCGGCTGACCCTCTTCTaGCTTCACTTTACACCCCATCATAGCACATTATTT +
Preference number: 3 (lower is better)
Translates to: FPSIITMRLTLF*LHFTPHHSTLF
Trigger: AAATAATGTGCTATGATGGGGTGTAAAGTGAAGGCAGAAGAGGGTCAGCCGCATTGTTATGATACTGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR TCA 72 bp GTGTACTATGGAAGGGTCCGGACAAAGACTAATATTTaGGATCTCTTAGTAGCACAACGTGAAAATGGTAGG +
Preference number: 3 (lower is better)
Translates to: VYYGRVRTKTNI*DLLVAQRENGR
Trigger: CCTACCATTTTCACGTTGTGCTACTAAGAGATCTCAAATATTAGTCTTTGTCCGGACCCTTCCATAGTACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
3UTR TCA 72 bp AGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCATaGCCACACTCTGGAAGTGGTGAACTGTTACACATT +
Preference number: 3 (lower is better)
Translates to: SYCFPFLNMFWA*PHSGSGELLHI
Trigger: AATGTGTAACAGTTCACCACTTCCAGAGTGTGGTCATGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CAA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTGTTTCCAAAAACAGCTaGGCCATGGCTTTGCACTCT +
Preference number: 3 (lower is better)
Translates to: TSTQPTSRSPVILSVVNIVSKNS*AMALHS
Trigger: AGAGTGCAAAGCCATGGCCAAGCTGTTTTTGGAAAC...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CAA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTATAGGATCATTTCTCTaGGATTTACCACTAGGCTCT +
Preference number: 3 (lower is better)
Translates to: PPETSLARSYCFPFLNMFIGSFL*DLPLGS
Trigger: AGAGCCTAGTGGTAAATCCAAGAGAAATGATCCTAT...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR-3UTR CAA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTGTTTGTGAATCAGCTTaGGATAGGATCATTTCTCTT +
Preference number: 3 (lower is better)
Translates to: TSTQPTSRSPVILSVVNIVCESA*DRIISL
Trigger: AAGAGAAATGATCCTATCCAAAGCTGATTCACAAAC...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ACGGCTGCACGCTGGGCACGCTGGGCACGCTGGCGGGATGCACGGGCCTTTGTCCTTGCTCTGGCTGTCTaGAGGCCTGGCGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TAARWARWARWRDARAFVLALAV*RPGGLQ
Trigger: CTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAG...GACAAAGGCCCGTGCATCCCGCCAGCGTGCCCAGCGTGCCCAGCGTGCAGCCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp ACGGCTGCACGCTGGGCACGCTGGGCACGCTGGCGGGATGCACGGGCCTTTGTCTTGTCCTGCTGCCTCTaGGGTAGCAGAGTCGGCACA +
Preference number: 4 (lower is better)
Translates to: TAARWARWARWRDARAFVLSCCL*GSRVGT
Trigger: TGTGCCGACTCTGCTACCTCAGAGGCAGCAGGACAA...GACAAAGGCCCGTGCATCCCGCCAGCGTGCCCAGCGTGCCCAGCGTGCAGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp ACGGCTGCACGCTGGGCACGCTGGGCACGCTGGCGGGATGCACGGGCCTTTGTCGAAGGGGTAGAGGTCTaGGGGGCCAAGATATCCGAG +
Preference number: 4 (lower is better)
Translates to: TAARWARWARWRDARAFVEGVEV*GAKISE
Trigger: CTCGGATATCTTGGCCCCCCAGACCTCTACCCCTTC...GACAAAGGCCCGTGCATCCCGCCAGCGTGCCCAGCGTGCCCAGCGTGCAGCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CTGAGCGCCTGTACCAGCGGGCTGTCCTCTAACAGCGACGGCTGCACGCTGGGCGTCAGCTCTGTCACTTaGCTTCTGCCGCCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: LSACTSGLSSNSDGCTLGVSSVT*LLPPAH
Trigger: GTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGAC...GCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CTGAGCGCCTGTACCAGCGGGCTGTCCTCTAACAGCGACGGCTGCACGCTGGGCCCCTCGGCTGTCAGGTaGGCGTGGGTTTGTGAATCA +
Preference number: 4 (lower is better)
Translates to: LSACTSGLSSNSDGCTLGPSAVR*AWVCES
Trigger: TGATTCACAAACCCACGCTCACCTGACAGCCGAGGG...GCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGCTGGTGGAAAGGCCGAAAAGCGGCACAGGGTGGACTaGGGGGCGTCTCGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: AQASRLREVLLAGGKAEKRHRVD*GASRFS
Trigger: AGAAAAGCGAGACGCCCCTCAGTCCACCCTGTGCCG...CTTTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp TCGGCACAGGGTGGACTGAGGGGCGTCTCGCTTTTCTGTCCACCCTCTGAGACAGGCCAGCAGACTTCGTaGGGTGCTGCTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SAQGGLRGVSLFCPPSETGQQTS*GAAGWW
Trigger: CCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCC...TGTCTCAGAGGGTGGACAGAAAAGCGAGACGCCCCTCAGTCCACCCTGTGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGCTGGTGGAAAGGCCGAAAAGGTCCGTCCAGCAGAGTaGTGCTCGTGTCCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: AQASRLREVLLAGGKAEKVRPAE*CSCPSA
Trigger: AGCCGAGGGACACGAGCATCACTCTGCTGGACGGAC...CTTTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp ACGGCTGCACGCTGGGCACGCTGGGCACGCTGGCGGGATGCACGGGCCTTTGTCGATGTAATGGTGGTGTaGTCAAAGGCTCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: TAARWARWARWRDARAFVDVMVV*SKAQPL
Trigger: GAGTGGCTGAGCCTTTGAGCACACCACCATTACATC...GACAAAGGCCCGTGCATCCCGCCAGCGTGCCCAGCGTGCCCAGCGTGCAGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CTGAGCGCCTGTACCAGCGGGCTGTCCTCTAACAGCGACGGCTGCACGCTGGGCCCTCCTTATCAGGACTaGTTTCGGGAGTCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: LSACTSGLSSNSDGCTLGPPYQD*FRESAP
Trigger: CGGAGCAGACTCCCGAAACCAGTCCTGATAAGGAGG...GCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CTGAGCGCCTGTACCAGCGGGCTGTCCTCTAACAGCGACGGCTGCACGCTGGGCTTCGTGAGGTGCTGCTaGCTGGTGGAAAGGCCGAAA +
Preference number: 4 (lower is better)
Translates to: LSACTSGLSSNSDGCTLGFVRCC*LVERPK
Trigger: TTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAA...GCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CTTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACCGGCACAGGGTGGACTaGGGGGCGTCTCGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LGLRKWAAGCSCRQSNWHRHRVD*GASRFS
Trigger: AGAAAAGCGAGACGCCCCTCAGTCCACCCTGTGCCG...GTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp TGGCACTGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGACAGGTGCAGCCCACTaGGCGCCTGTACCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: WHCLRRWLRQSRSVRTLWTGAAH*APVPAG
Trigger: GCCCGCTGGTACAGGCGCTCAGTGGGCTGCACCTGT...CCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp TCCGAGTGCCAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGCCCGAAAAGCTAGACTaGCTGCCCACTTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SECQPLRPRPADFVRCCWPEKLD*LPTFPS
Trigger: GCTGGGGAAAGTGGGCAGTCAGTCTAGCTTTTCGGG...CCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CTTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACGTCCGTCCAGCAGAGTaGTGCTCGTGTCCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LGLRKWAAGCSCRQSNWHVRPAE*CSCPSA
Trigger: AGCCGAGGGACACGAGCATCACTCTGCTGGACGGAC...GTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CTGAGCGCCTGTACCAGCGGGCTGTCCTCTAACAGCGACGGCTGCACGCTGGGCCCCGACTTTCCTGTCTaGGGTACTGGGTTTGCTCTA +
Preference number: 4 (lower is better)
Translates to: LSACTSGLSSNSDGCTLGPDFPV*GTGFAL
Trigger: TAGAGCAAACCCAGTACCTCAGACAGGAAAGTCGGG...GCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGGGCACGCTGGCGGGATaGACGGGCCTTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLGTLAG*TGLCPA
Trigger: AGCAGGACAAAGGCCCGTGCATCCCGCCAGCGTGCC...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CTTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACAGAGTCGGCACAGGGTaGACTGAGGGGCGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: LGLRKWAAGCSCRQSNWHRVGTG*TEGRLA
Trigger: AGCGAGACGCCCCTCAGTCCACCCTGTGCCGACTCT...GTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp TCCGAGTGCCAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGGATAAAAGGGACCTCTaGGCGGTGCCACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SECQPLRPRPADFVRCCWDKRDL*AVPLLL
Trigger: CAGCAGCAGTGGCACCGCCCAGAGGTCCCTTTTATC...CCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CTGAGCGCCTGTACCAGCGGGCTGTCCTCTAACAGCGACGGCTGCACGCTGGGCCACTGCCTCCGTAGATaGCTGAGGCAGAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: LSACTSGLSSNSDGCTLGHCLRR*LRQSRS
Trigger: ACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTG...GCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGCTTGCTCTGGCTGTCTaGAGGCCTGGCGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLLALAV*RPGGLQ
Trigger: CTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAG...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp TGGCACTGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGGGCCAGCAGACTTCGTaGGGTGCTGCTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: WHCLRRWLRQSRSVRTLWGQQTS*GAAGWW
Trigger: CCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCC...CCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCAGGCCAGCAGACTTCGTaGGGTGCTGCTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: APSTVSNWPELQALPRSAGQQTS*GAAGWW
Trigger: CCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCC...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp TCCGCCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACAGGGTCTACCTACCTaGCCCCCAAGCTGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: SAASQLCHLASAACAQNRQGLPT*PPSWLS
Trigger: ACTGAGCCAGCTTGGGGGTCAGGTAGGTAGACCCTG...TCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CTGAGCGCCTGTACCAGCGGGCTGTCCTCTAACAGCGACGGCTGCACGCTGGGCTTTGGCTTCTCCAGGTaGAGCAGCTTGAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: LSACTSGLSSNSDGCTLGFGFSR*SSLSLL
Trigger: GAGCAAACTCAAGCTGCTGCACCTGGAGAAGCCAAA...GCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCAGGCACGCTGGCGGGATaGACGGGCCTTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRAGTLAG*TGLCPA
Trigger: AGCAGGACAAAGGCCCGTGCATCCCGCCAGCGTGCC...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCAGGCACGCTGGCGGGATaGACGGGCCTTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: APSTVSNWPELQALPRSAGTLAG*TGLCPA
Trigger: AGCAGGACAAAGGCCCGTGCATCCCGCCAGCGTGCC...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGCTGTCTGCGGACAGGTaGAGCCCACTGAGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLLSADR*SPLSAC
Trigger: ACAGGCGCTCAGTGGGCTGCACCTGTCCGCAGACAG...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp TCCGCCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGAGACTTCGTGAGGTGCTaGTGGCTGGTGGAAAGGCCG +
Preference number: 4 (lower is better)
Translates to: SAASQLCHLASAACAQNRDFVRC*WLVERP
Trigger: CGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTC...TCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp TGCAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTGGGGAAGGGGCTCTCTTCATaGCAGCTCCGCCGCGAGTCA +
Preference number: 4 (lower is better)
Translates to: CNRLLWLSEGLAVCSFLGKGLSS*QLRRES
Trigger: TGACTCGCGGCGGAGCTGGCATGAAGAGAGCCCCTT...CCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACGGCTGTCTGAAGGCCTaGCGGTCTGCAGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHGCLKA*RSAASW
Trigger: CCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCC...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CTGAGCGCCTGTACCAGCGGGCTGTCCTCTAACAGCGACGGCTGCACGCTGGGCAGTGTGAGGACTCTGTaGCAAAATACCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSACTSGLSSNSDGCTLGSVRTL*QNTSCW
Trigger: CCAGCAGCTGGTATTTTGCCACAGAGTCCTCACACT...GCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CAA 72 bp GTGCCACTGCTGCTGGTTCTGACCGAATGCAATCGCTaGCTCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VPLLLVLTECNR*LWLSEGLAVCS
Trigger: GCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGGTCAGAACCAGCAGCAGTGGCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGCTGGTGGAAAGGCCGAAAAGTTTCTGTCCACCCTCTaGGACAGCAGGGACAGGTTC +
Preference number: 4 (lower is better)
Translates to: AQASRLREVLLAGGKAEKFLSTL*DSRDRF
Trigger: GAACCTGTCCCTGCTGTCTCAGAGGGTGGACAGAAA...CTTTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GAGACAGCAGGGACAGGTTCATTTGGCTTCTCCAGGTGCAGCAGCTTGAGTTTGACAGGTGCAGCCCACTaGGCGCCTGTACCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: ETAGTGSFGFSRCSSLSLTGAAH*APVPAG
Trigger: GCCCGCTGGTACAGGCGCTCAGTGGGCTGCACCTGT...CAAACTCAAGCTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTGCTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCAGTCCGTCCAGCAGAGTaGTGCTCGTGTCCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: APSTVSNWPELQALPRSAVRPAE*CSCPSA
Trigger: AGCCGAGGGACACGAGCATCACTCTGCTGGACGGAC...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp ACGGCTGCACGCTGGGCACGCTGGGCACGCTGGCGGGATGCACGGGCCTTTGTCATCCCAGCTAAACAGTaGACTAGAACACATCCATTG +
Preference number: 4 (lower is better)
Translates to: TAARWARWARWRDARAFVIPAKQ*TRTHPL
Trigger: CAATGGATGTGTTCTAGTGCACTGTTTAGCTGGGAT...GACAAAGGCCCGTGCATCCCGCCAGCGTGCCCAGCGTGCCCAGCGTGCAGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGGTCTTCCAGCCTGTCTaGGGACAGGTGCAGCCCACT +
Preference number: 4 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLVFQPV*GQVQPT
Trigger: AGTGGGCTGCACCTGTCCGCAGACAGGCTGGAAGAC...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGGAAGGCCTGGCGGTCTaGAGCTTCTTGGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLEGLAV*SFLGML
Trigger: CAGCATCCCCAAGAAGCTGCAGACCGCCAGGCCTTC...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp TCCGCCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGAGCAGACTTCGTGAGGTaGTGCTGGCTGGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SAASQLCHLASAACAQNRADFVR*CWLVER
Trigger: CCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGC...TCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp TCGGCACAGGGTGGACTGAGGGGCGTCTCGCTTTTCTGTCCACCCTCTGAGACATGCAATCGCTTGCTCTaGCTGTCTGAAGGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: SAQGGLRGVSLFCPPSETCNRLL*LSEGLA
Trigger: CGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA...TGTCTCAGAGGGTGGACAGAAAAGCGAGACGCCCCTCAGTCCACCCTGTGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp TCCGAGTGCCAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGCACTGCCTCCGTAGATaGCTGAGGCAGAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: SECQPLRPRPADFVRCCWHCLRR*LRQSRS
Trigger: ACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTG...CCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CAA 72 bp GTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTaGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: VTWLLPPAHRID*VSASGQLAAAV
Trigger: TACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
3UTR CAA 72 bp CTTCATGCCAGCTCCGCCGCGAGTCAGCTCTGTCACTaGGCTTCTGCCGCCTGCGCACAGAATAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: LHASSAASQLCH*ASAACAQNRLG
Trigger: ACCAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGAGCTGGCATGAAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CTGAGCGCCTGTACCAGCGGGCTGTCCTCTAACAGCGACGGCTGCACGCTGGGCAACCTTATGTTTCGCTaGATGCTGGATGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LSACTSGLSSNSDGCTLGNLMFR*MLDELC
Trigger: ACAGAGCTCATCCAGCATTCAGCGAAACATAAGGTT...GCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACTTTCTGTCCACCCTCTaGGACAGCAGGGACAGGTTC +
Preference number: 4 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHFLSTL*DSRDRF
Trigger: GAACCTGTCCCTGCTGTCTCAGAGGGTGGACAGAAA...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGACAGGTGCAGCCCACTaGGCGCCTGTACCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVTGAAH*APVPAG
Trigger: GCCCGCTGGTACAGGCGCTCAGTGGGCTGCACCTGT...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACCACTGCTGCTGGTTCTaGCCGAATGCAATCGCTTGC +
Preference number: 4 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHHCCWF*PNAIAC
Trigger: GCAAGCGATTGCATTCGGTCAGAACCAGCAGCAGTG...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp TGGCACTGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCAGGGTCTACCTACCTaGCCCCCAAGCTGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: WHCLRRWLRQSRSVRTLWQGLPT*PPSWLS
Trigger: ACTGAGCCAGCTTGGGGGTCAGGTAGGTAGACCCTG...CCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp ACGGCTGCACGCTGGGCACGCTGGGCACGCTGGCGGGATGCACGGGCCTTTGTCGCTTTGGACAGGTATTaGTGGCATTTAACACATAAC +
Preference number: 4 (lower is better)
Translates to: TAARWARWARWRDARAFVALDRY*WHLTHN
Trigger: GTTATGTGTTAAATGCCAGCAATACCTGTCCAAAGC...GACAAAGGCCCGTGCATCCCGCCAGCGTGCCCAGCGTGCCCAGCGTGCAGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCAGAAGGCCTGGCGGTCTaGAGCTTCTTGGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRAEGLAV*SFLGML
Trigger: CAGCATCCCCAAGAAGCTGCAGACCGCCAGGCCTTC...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp TCGGCACAGGGTGGACTGAGGGGCGTCTCGCTTTTCTGTCCACCCTCTGAGACACCTCCTTATCAGGACTaGTTTCGGGAGTCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: SAQGGLRGVSLFCPPSETPPYQD*FRESAP
Trigger: CGGAGCAGACTCCCGAAACCAGTCCTGATAAGGAGG...TGTCTCAGAGGGTGGACAGAAAAGCGAGACGCCCCTCAGTCCACCCTGTGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp TGGCACTGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCTTGGTCTCCGCAAGTaGGCAGCTGGCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: WHCLRRWLRQSRSVRTLWLGLRK*AAGCSC
Trigger: ACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG...CCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCACTTGGTCTCCGCAAGTaGGCAGCTGGCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRALGLRK*AAGCSC
Trigger: ACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGGTCTCCGCAAGTGGGCAGAGCTTTACACTGGACTaGAAGCTTTTGGGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: TWLLPPAHRIDLVSASGQSFTLD*KLLGPP
Trigger: CGGCGGCCCCAAAAGCTTTCAGTCCAGTGTAAAGCT...CTGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp TGCAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTGGGGTGCTCCGATAGTTCCTaGACAGGGGAGAACTGGCAT +
Preference number: 4 (lower is better)
Translates to: CNRLLWLSEGLAVCSFLGCSDSS*TGENWH
Trigger: ATGCCAGTTCTCCCCTGTTCAGGAACTATCGGAGCA...CCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp TGGCACTGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCCCGAAAAGCTAGACTaGCTGCCCACTTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: WHCLRRWLRQSRSVRTLWPEKLD*LPTFPS
Trigger: GCTGGGGAAAGTGGGCAGTCAGTCTAGCTTTTCGGG...CCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp TGCAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTGGGGCCAATCCCATTCTGCTaGATCAGCTCCTGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: CNRLLWLSEGLAVCSFLGPIPFC*ISSCKQ
Trigger: CTGCTTGCAGGAGCTGATGCAGCAGAATGGGATTGG...CCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGCTGGTGGAAAGGCCGAAAAGTTTGGCTTCTCCAGGTaGAGCAGCTTGAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: AQASRLREVLLAGGKAEKFGFSR*SSLSLL
Trigger: GAGCAAACTCAAGCTGCTGCACCTGGAGAAGCCAAA...CTTTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACCTGGTTCTGACCGAATaGAATCGCTTGCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHLVLTE*NRLLWL
Trigger: CAGCCAGAGCAAGCGATTGCATTCGGTCAGAACCAG...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp TGCAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTGGGGCTGGTTCTGACCGAATaGAATCGCTTGCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CNRLLWLSEGLAVCSFLGLVLTE*NRLLWL
Trigger: CAGCCAGAGCAAGCGATTGCATTCGGTCAGAACCAG...CCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCAGCAGACTTCGTGAGGTaGTGCTGGCTGGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRAADFVR*CWLVER
Trigger: CCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGC...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGAAGTGGGCAGCTGGCTaGAGCTGTAGGCAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLKWAAG*SCRQSN
Trigger: GTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTT...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGAGCAGCTCCAGAGCCTaGCTCCGAGGCCACCCCTTC +
Preference number: 4 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVSSSRA*LRGHPF
Trigger: GAAGGGGTGGCCTCGGAGGCAGGCTCTGGAGCTGCT...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp TCCGCCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGAGCTTCTTGGGGATGCTaGCTTCCTCCTTATCAGGAC +
Preference number: 4 (lower is better)
Translates to: SAASQLCHLASAACAQNRASWGC*LPPYQD
Trigger: GTCCTGATAAGGAGGAAGCCAGCATCCCCAAGAAGC...TCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp TGGCACTGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGGAAGGGGTAGAGGTCTaGGGGGCCAAGATATCCGAG +
Preference number: 4 (lower is better)
Translates to: WHCLRRWLRQSRSVRTLWEGVEV*GAKISE
Trigger: CTCGGATATCTTGGCCCCCCAGACCTCTACCCCTTC...CCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp TCCGAGTGCCAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGAGTGAGAAAACAGTCTaGAGAGAGAGAGGCAACATC +
Preference number: 4 (lower is better)
Translates to: SECQPLRPRPADFVRCCWSEKTV*RERGNI
Trigger: GATGTTGCCTCTCTCTCTTCAGACTGTTTTCTCACT...CCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGGCTCCTGCAAGCAGGTaGACAGAGTTGAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLAPASR*TELKLF
Trigger: GAAGAGCTTCAACTCTGTTCACCTGCTTGCAGGAGC...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CTTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACTTTGCTCTTTGGCCCTaGTGCTCCAGTCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: LGLRKWAAGCSCRQSNWHFALWP*CSSLVL
Trigger: AAGAACCAGACTGGAGCATCAGGGCCAAAGAGCAAA...GTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CTTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACCTCAGGAGACCTCAATaGTTTCCATGCTGCCCGAAA +
Preference number: 4 (lower is better)
Translates to: LGLRKWAAGCSCRQSNWHLRRPQ*FPCCPK
Trigger: TTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAG...GTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCATCCCCAATTACATGCTaGAGAGAGCCAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: APSTVSNWPELQALPRSASPITC*REPATT
Trigger: GGTGGTGGCTGGCTCTCTTCAGCATGTAATTGGGGA...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp TGCAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTGGGGGATGTAATGGTGGTGTaGTCAAAGGCTCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: CNRLLWLSEGLAVCSFLGDVMVV*SKAQPL
Trigger: GAGTGGCTGAGCCTTTGAGCACACCACCATTACATC...CCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp TCCGCCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGAACGCTCCCACTTCGATaGAGTGGAGATAAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: SAASQLCHLASAACAQNRTLPLR*SGDKRD
Trigger: GTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGT...TCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACAGTGTGAGGACTCTGTaGCAAAATACCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHSVRTL*QNTSCW
Trigger: CCAGCAGCTGGTATTTTGCCACAGAGTCCTCACACT...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGTGTAGGCAGAGTAACTaGCACTGCCTCCGTAGATGG +
Preference number: 4 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLCRQSN*HCLRRW
Trigger: CCATCTACGGAGGCAGTGCCAGTTACTCTGCCTACA...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp GAGACAGCAGGGACAGGTTCATTTGGCTTCTCCAGGTGCAGCAGCTTGAGTTTGGTCAGCTCTGTCACTTaGCTTCTGCCGCCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: ETAGTGSFGFSRCSSLSLVSSVT*LLPPAH
Trigger: GTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGAC...CAAACTCAAGCTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTGCTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp TGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCAAAATTATCTTCTCCTTCTCTaGGGGGTGGGTTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: CLRRWLRQSRSVRTLWQNYLLLL*GVGWGG
Trigger: CCCGCCCCAACCCACCCCTCAGAGAAGGAGAAGATA...ATTTTGCCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp TCGGCACAGGGTGGACTGAGGGGCGTCTCGCTTTTCTGTCCACCCTCTGAGACACTTTCTCTTTCCCGTTaGTGTGCTCTTGCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: SAQGGLRGVSLFCPPSETLSLSR*CALAKD
Trigger: GTCCTTTGCAAGAGCACATCAACGGGAAAGAGAAAG...TGTCTCAGAGGGTGGACAGAAAAGCGAGACGCCCCTCAGTCCACCCTGTGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACCAAGAGCCCTCCAAGTaGATGTCTCTTTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHQEPSK*MSLSLS
Trigger: GGAAAGAGAAAGAGACATTCACTTGGAGGGCTCTTG...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp TCGGCACAGGGTGGACTGAGGGGCGTCTCGCTTTTCTGTCCACCCTCTGAGACATGTACTAAAAGTGTATaGGGTCAGGCTGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SAQGGLRGVSLFCPPSETCTKSV*GQAGGD
Trigger: GTCACCACCAGCCTGACCTCATACACTTTTAGTACA...TGTCTCAGAGGGTGGACAGAAAAGCGAGACGCCCCTCAGTCCACCCTGTGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp TCCGCCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGAGAGAGAAGGAACGCTTaGGCTTATTGCTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SAASQLCHLASAACAQNRERRNA*AYCCLP
Trigger: TGGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTC...TCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp ACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGGTCTCCGCAAGTGGGCAGTCCTGGTGGTTCAGCTaGATCCTAGACAGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: TWLLPPAHRIDLVSASGQSWWFS*ILDSFP
Trigger: AGGGAAACTGTCTAGGATTCAGCTGAACCACCAGGA...CTGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp TGCAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTGGGGATCATTCTTTACCTTTaGTCCCGCGCTCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: CNRLLWLSEGLAVCSFLGIILYL*SRAPTA
Trigger: AGCTGTTGGAGCGCGGGAGCAAAGGTAAAGAATGAT...CCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGCCGTTGATGTGCTCTTaGAAAGGACTCCGTCCACAA +
Preference number: 4 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLPLMCS*KGLRPQ
Trigger: TTGTGGACGGAGTCCTTTGCAAGAGCACATCAACGG...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACTCTTTCCCGTTGATGTaGTCTTGCAAAGGACTCCGT +
Preference number: 4 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHSFPLM*SCKGLR
Trigger: ACGGAGTCCTTTGCAAGAGCACATCAACGGGAAAGA...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp TGGCACTGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGGCAGCTTCTTGGGGATaGTGGCTTCCTCCTTATCAG +
Preference number: 4 (lower is better)
Translates to: WHCLRRWLRQSRSVRTLWAASWG*WLPPYQ
Trigger: CTGATAAGGAGGAAGCCAGCATCCCCAAGAAGCTGC...CCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCACTGGTTCTGACCGAATaGAATCGCTTGCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRALVLTE*NRLLWL
Trigger: CAGCCAGAGCAAGCGATTGCATTCGGTCAGAACCAG...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGGACTTCGTGAGGTGCTaGTGGCTGGTGGAAAGGCCG +
Preference number: 4 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVDFVRC*WLVERP
Trigger: CGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTC...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp TGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCAAAATAAGGGGCTCTCTTCATaGCAGCTCCGCCGCGAGTCA +
Preference number: 4 (lower is better)
Translates to: CLRRWLRQSRSVRTLWQNKGLSS*QLRRES
Trigger: TGACTCGCGGCGGAGCTGGCATGAAGAGAGCCCCTT...ATTTTGCCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp TCCGAGTGCCAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGCCCACGGGAATTTTGTaGATAGACAGTTTGAATTGG +
Preference number: 4 (lower is better)
Translates to: SECQPLRPRPADFVRCCWPTGIL*IDSLNW
Trigger: CCAATTCAAACTGTCTATGCACAAAATTCCCGTGGG...CCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp GATATCCAGAGAGAAGGAACGCTTGAGCTTATTGCTGTCTTCCAGCCTGTCTGCAGAGTCGGCACAGGGTaGACTGAGGGGCGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: DIQREGTLELIAVFQPVCRVGTG*TEGRLA
Trigger: AGCGAGACGCCCCTCAGTCCACCCTGTGCCGACTCT...GCAGACAGGCTGGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCTGGATATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCAGCTTCTTGGGGATGCTaGCTTCCTCCTTATCAGGAC +
Preference number: 4 (lower is better)
Translates to: APSTVSNWPELQALPRSAASWGC*LPPYQD
Trigger: GTCCTGATAAGGAGGAAGCCAGCATCCCCAAGAAGC...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp TGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCAAAATCTTGGTCTCCGCAAGTaGGCAGCTGGCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: CLRRWLRQSRSVRTLWQNLGLRK*AAGCSC
Trigger: ACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG...ATTTTGCCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp TGCAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTGGGGAACCTTATGTTTCGCTaGATGCTGGATGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: CNRLLWLSEGLAVCSFLGNLMFR*MLDELC
Trigger: ACAGAGCTCATCCAGCATTCAGCGAAACATAAGGTT...CCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCATTTGGCTTCTCCAGGTaGAGCAGCTTGAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRAFGFSR*SSLSLL
Trigger: GAGCAAACTCAAGCTGCTGCACCTGGAGAAGCCAAA...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTGTCTTCCAGCCTGTCTaGGGACAGGTGCAGCCCACT +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFVFQPV*GQVQPT
Trigger: AGTGGGCTGCACCTGTCCGCAGACAGGCTGGAAGAC...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGGTCTTCCAGCCTGTCTaGGGACAGGTGCAGCCCACT +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEVFQPV*GQVQPT
Trigger: AGTGGGCTGCACCTGTCCGCAGACAGGCTGGAAGAC...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp TGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCAAAATGCCAAGATATCCGAGTaGCAGCCCTTAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CLRRWLRQSRSVRTLWQNAKISE*QPLRPR
Trigger: CCTGGGCCTTAAGGGCTGGCACTCGGATATCTTGGC...ATTTTGCCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CTTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACGGGGATTCTAGCATCTaGCCTTCCATTTTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LGLRKWAAGCSCRQSNWHGDSSI*PSIFVE
Trigger: CTCAACAAAAATGGAAGGGCAGATGCTAGAATCCCC...GTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCACTGAGGACGCCCCTTTaGTCTCGCTCCATTTTGATT +
Preference number: 4 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRALRTPL*SRSILI
Trigger: AATCAAAATGGAGCGAGAGCAAAGGGGCGTCCTCAG...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GATATCCAGAGAGAAGGAACGCTTGAGCTTATTGCTGTCTTCCAGCCTGTCTGCGGCTGTCTGAAGGCCTaGCGGTCTGCAGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: DIQREGTLELIAVFQPVCGCLKA*RSAASW
Trigger: CCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCC...GCAGACAGGCTGGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCTGGATATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp TGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCAAAATGATAAAAGGGACCTCTaGGCGGTGCCACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CLRRWLRQSRSVRTLWQNDKRDL*AVPLLL
Trigger: CAGCAGCAGTGGCACCGCCCAGAGGTCCCTTTTATC...ATTTTGCCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGCTTGGTCTCCGCAAGTaGGCAGCTGGCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSELGLRK*AAGCSC
Trigger: ACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCACTTTCTCTTTCCCGTTaGTGTGCTCTTGCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: APSTVSNWPELQALPRSALSLSR*CALAKD
Trigger: GTCCTTTGCAAGAGCACATCAACGGGAAAGAGAAAG...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GAGACAGCAGGGACAGGTTCATTTGGCTTCTCCAGGTGCAGCAGCTTGAGTTTGGCTCCTGCAAGCAGGTaGACAGAGTTGAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ETAGTGSFGFSRCSSLSLAPASR*TELKLF
Trigger: GAAGAGCTTCAACTCTGTTCACCTGCTTGCAGGAGC...CAAACTCAAGCTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTGCTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CTTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACCTCAATGAAATCTACTaGTTTGTCCAACCACGGCAA +
Preference number: 4 (lower is better)
Translates to: LGLRKWAAGCSCRQSNWHLNEIY*FVQPRQ
Trigger: TTGCCGTGGTTGGACAAATCAGTAGATTTCATTGAG...GTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTTTGTCCTGCTGCCTCTaGGGTAGCAGAGTCGGCACA +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFLSCCL*GSRVGT
Trigger: TGTGCCGACTCTGCTACCTCAGAGGCAGCAGGACAA...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTACAGGTGCAGCCCACTaGGCGCCTGTACCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSTGAAH*APVPAG
Trigger: GCCCGCTGGTACAGGCGCTCAGTGGGCTGCACCTGT...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp TCCGAGTGCCAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGGGATGTGTAATTCACTaGATAAAATGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SECQPLRPRPADFVRCCWGCVIH*IKWFSS
Trigger: GGAGGAAAACCATTTTATTCAGTGAATTACACATCC...CCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGCCCTCGGCTGTCAGGTaGGCGTGGGTTTGTGAATCA +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEPSAVR*AWVCES
Trigger: TGATTCACAAACCCACGCTCACCTGACAGCCGAGGG...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCCCTCGGCTGTCAGGTaGGCGTGGGTTTGTGAATCA +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFPSAVR*AWVCES
Trigger: TGATTCACAAACCCACGCTCACCTGACAGCCGAGGG...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCAATCATTCTTTACCTTTaGTCCCGCGCTCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRAIILYL*SRAPTA
Trigger: AGCTGTTGGAGCGCGGGAGCAAAGGTAAAGAATGAT...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp TCGGCACAGGGTGGACTGAGGGGCGTCTCGCTTTTCTGTCCACCCTCTGAGACAAACACTTTGTCCTGTTaGAACCTTCGCTTCATAAGC +
Preference number: 4 (lower is better)
Translates to: SAQGGLRGVSLFCPPSETNTLSC*NLRFIS
Trigger: GCTTATGAAGCGAAGGTTGCAACAGGACAAAGTGTT...TGTCTCAGAGGGTGGACAGAAAAGCGAGACGCCCCTCAGTCCACCCTGTGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp TCCGAGTGCCAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGTCCATTGGAGGCTTTTaGTTTCTCAATGAAATCTAC +
Preference number: 4 (lower is better)
Translates to: SECQPLRPRPADFVRCCWSIGGF*FLNEIY
Trigger: GTAGATTTCATTGAGAAAGCAAAAGCCTCCAATGGA...CCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTGCCAAGATATCCGAGTaGCAGCCCTTAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFAKISE*QPLRPR
Trigger: CCTGGGCCTTAAGGGCTGGCACTCGGATATCTTGGC...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp TCGGCACAGGGTGGACTGAGGGGCGTCTCGCTTTTCTGTCCACCCTCTGAGACACCTACCTATTCACAATaGCTAGAAAATGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: SAQGGLRGVSLFCPPSETPTYSQ*LENGLP
Trigger: TGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGG...TGTCTCAGAGGGTGGACAGAAAAGCGAGACGCCCCTCAGTCCACCCTGTGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGTGGACTGAAAGCTTTTaGGGCCGCCGACCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVWTESF*GRRPPN
Trigger: ATTGGGAGGTCGGCGGCCCCAAAAGCTTTCAGTCCA...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp TCCGAGTGCCAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGATGGCTTCCAAAATGTaGGATGTATTGTATTCCACA +
Preference number: 4 (lower is better)
Translates to: SECQPLRPRPADFVRCCWMASKM*DVLYST
Trigger: TGTGGAATACAATACATCCCACATTTTGGAAGCCAT...CCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp ATTAAAACCAAGTCCCCCAAACCTCCTGAAACATCGTTAGCAAGGAGCTACTGCAGAGTCGGCACAGGGTaGACTGAGGGGCGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: IKTKSPKPPETSLARSYCRVGTG*TEGRLA
Trigger: AGCGAGACGCCCCTCAGTCCACCCTGTGCCGACTCT...GCAGTAGCTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGACTTGGTTTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGTGCAATCGCTTGCTCTaGCTGTCTGAAGGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSECNRLL*LSEGLA
Trigger: CGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTTGCAATCGCTTGCTCTaGCTGTCTGAAGGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFCNRLL*LSEGLA
Trigger: CGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTGATAAAAGGGACCTCTaGGCGGTGCCACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFDKRDL*AVPLLL
Trigger: CAGCAGCAGTGGCACCGCCCAGAGGTCCCTTTTATC...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGGAAGGGGTAGAGGTCTaGGGGGCCAAGATATCCGAG +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEEGVEV*GAKISE
Trigger: CTCGGATATCTTGGCCCCCCAGACCTCTACCCCTTC...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTTATCTTCTCCTTCTCTaGGGGGTGGGTTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: QVSFFSGDLNDFHAARKAYLLLL*GVGWGG
Trigger: CCCGCCCCAACCCACCCCTCAGAGAAGGAGAAGATA...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp TTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACTTTTAATTTGCCACGATaGTGTAATGGTGGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LVSASGQLAAAVGRVTGTFNLPR*CNGGVL
Trigger: GAGCACACCACCATTACATCATCGTGGCAAATTAAA...AGTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp TGCAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTGGGGCTCTCAGTAACAATTTaGGTTCCAATCATCTCATGG +
Preference number: 4 (lower is better)
Translates to: CNRLLWLSEGLAVCSFLGLSVTI*VPIISW
Trigger: CCATGAGATGATTGGAACTCAAATTGTTACTGAGAG...CCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGCTTGCTCTGGCTGTCTaGAGGCCTGGCGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SEAERAKTSALAENLKVLLALAV*RPGGLQ
Trigger: CTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAG...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGCTGGTGGAAAGGCCGAAAAGGGATGTGTAATTCACTaGATAAAATGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: AQASRLREVLLAGGKAEKGCVIH*IKWFSS
Trigger: GGAGGAAAACCATTTTATTCAGTGAATTACACATCC...CTTTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGACAGTGATTGTAGGTTaGGGACTGAGGACGCCCCTT +
Preference number: 4 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVTVIVG*GLRTPL
Trigger: AAGGGGCGTCCTCAGTCCTCAACCTACAATCACTGT...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTTGTCAGCAACTGGCCTaGACTTCAGGCTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFCQQLA*TSGSPK
Trigger: CTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACA...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACCCTCCTTCTTTAATTTaGCACGATGATGTAATGGTG +
Preference number: 4 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHPPSLI*HDDVMV
Trigger: CACCATTACATCATCGTGGCAAATTAAAGAAGGAGG...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCAGGCACGCTGGCGGGATaGACGGGCCTTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPGTLAG*TGLCPA
Trigger: AGCAGGACAAAGGCCCGTGCATCCCGCCAGCGTGCC...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTCTGTCTGCGGACAGGTaGAGCCCACTGAGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGLSADR*SPLSAC
Trigger: ACAGGCGCTCAGTGGGCTGCACCTGTCCGCAGACAG...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGCTGTCTGCGGACAGGTaGAGCCCACTGAGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: SEAERAKTSALAENLKVLLSADR*SPLSAC
Trigger: ACAGGCGCTCAGTGGGCTGCACCTGTCCGCAGACAG...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTGAAGGCCTGGCGGTCTaGAGCTTCTTGGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: QVSFFSGDLNDFHAARKAEGLAV*SFLGML
Trigger: CAGCATCCCCAAGAAGCTGCAGACCGCCAGGCCTTC...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCCGAATGCAATCGCTTaGTCTGGCTGTCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFPNAIA*SGCLKA
Trigger: GGCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGG...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGAAGTGGGCAGCTGGCTaGAGCTGTAGGCAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEKWAAG*SCRQSN
Trigger: GTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTT...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTAAGTGGGCAGCTGGCTaGAGCTGTAGGCAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFKWAAG*SCRQSN
Trigger: GTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTT...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCATACCAACTGTATCCATaGAGTGAAGCAGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRAYQLYP*SEAERA
Trigger: TGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTA...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTTGGACTGAAAGCTTTTaGGGCCGCCGACCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFWTESF*GRRPPN
Trigger: ATTGGGAGGTCGGCGGCCCCAAAAGCTTTCAGTCCA...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCCTCCTTATCAGGACTaGTTTCGGGAGTCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFPPYQD*FRESAP
Trigger: CGGAGCAGACTCCCGAAACCAGTCCTGATAAGGAGG...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp GATATCCAGAGAGAAGGAACGCTTGAGCTTATTGCTGTCTTCCAGCCTGTCTGCTTCGTGAGGTGCTGCTaGCTGGTGGAAAGGCCGAAA +
Preference number: 4 (lower is better)
Translates to: DIQREGTLELIAVFQPVCFVRCC*LVERPK
Trigger: TTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAA...GCAGACAGGCTGGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCTGGATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CTTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACTCTCCAAATTCCATTTaGCAGCTTCTGCGTTTAAAC +
Preference number: 4 (lower is better)
Translates to: LGLRKWAAGCSCRQSNWHSPNSI*QLLRLN
Trigger: GTTTAAACGCAGAAGCTGCCAAATGGAATTTGGAGA...GTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGGGGAAGAATTCGGGTTaGCCCAATGTTGGCAACAGG +
Preference number: 4 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVGKNSG*PNVGNR
Trigger: CCTGTTGCCAACATTGGGCCAACCCGAATTCTTCCC...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGTCTATCTTCTCCTTCTCTaGGGGGTGGGTTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: TAWPWLCTLFTTDQNSMVYLLLL*GVGWGG
Trigger: CCCGCCCCAACCCACCCCTCAGAGAAGGAGAAGATA...GACCATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGTATCTTCTCCTTCTCTaGGGGGTGGGTTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQYLLLL*GVGWGG
Trigger: CCCGCCCCAACCCACCCCTCAGAGAAGGAGAAGATA...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCACGGCACAGGGTGGACTaGGGGGCGTCTCGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPRHRVD*GASRFS
Trigger: AGAAAAGCGAGACGCCCCTCAGTCCACCCTGTGCCG...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGGATGTAATGGTGGTGTaGTCAAAGGCTCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVDVMVV*SKAQPL
Trigger: GAGTGGCTGAGCCTTTGAGCACACCACCATTACATC...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACCTACAACCTTCTGACTaGAATCAATGTCAACCTTAT +
Preference number: 4 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHLQPSD*NQCQPY
Trigger: ATAAGGTTGACATTGATTGCAGTCAGAAGGTTGTAG...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CTTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACCTACAACCTTCTGACTaGAATCAATGTCAACCTTAT +
Preference number: 4 (lower is better)
Translates to: LGLRKWAAGCSCRQSNWHLQPSD*NQCQPY
Trigger: ATAAGGTTGACATTGATTGCAGTCAGAAGGTTGTAG...GTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACTCCATTGGAGGCTTTTaGTTTCTCAATGAAATCTAC +
Preference number: 4 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHSIGGF*FLNEIY
Trigger: GTAGATTTCATTGAGAAAGCAAAAGCCTCCAATGGA...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCAATCCCAGCTAAACAGTaGACTAGAACACATCCATTG +
Preference number: 4 (lower is better)
Translates to: APSTVSNWPELQALPRSAIPAKQ*TRTHPL
Trigger: CAATGGATGTGTTCTAGTGCACTGTTTAGCTGGGAT...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGCTGGTTCTGACCGAATaGAATCGCTTGCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSELVLTE*NRLLWL
Trigger: CAGCCAGAGCAAGCGATTGCATTCGGTCAGAACCAG...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCGGCTGACCCTCTTCTaGCTTCACTTTACACCCCAT +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFRLTLF*LHFTPH
Trigger: ATGGGGTGTAAAGTGAAGGCAGAAGAGGGTCAGCCG...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGAGAGTCGGCACAGGGTaGACTGAGGGGCGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWRVGTG*TEGRLA
Trigger: AGCGAGACGCCCCTCAGTCCACCCTGTGCCGACTCT...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGGCTTCTTGGGGATGCTaGCTTCCTCCTTATCAGGAC +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEASWGC*LPPYQD
Trigger: GTCCTGATAAGGAGGAAGCCAGCATCCCCAAGAAGC...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGGGCTGTCTGAAGGCCTaGCGGTCTGCAGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQGCLKA*RSAASW
Trigger: CCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCC...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGTCTCCAAATTCCATTTaGCAGCTTCTGCGTTTAAAC +
Preference number: 4 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLSPNSI*QLLRLN
Trigger: GTTTAAACGCAGAAGCTGCCAAATGGAATTTGGAGA...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGGGGAAGAATTCGGGTTaGCCCAATGTTGGCAACAGG +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEGKNSG*PNVGNR
Trigger: CCTGTTGCCAACATTGGGCCAACCCGAATTCTTCCC...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGAGCACTGTCAGCAACTaGCCTGAACTTCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSESTVSN*PELQAL
Trigger: GAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCT...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTCGGCACAGGGTGGACTaGGGGGCGTCTCGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PPETSLARSYCFPFLNMFRHRVD*GASRFS
Trigger: AGAAAAGCGAGACGCCCCTCAGTCCACCCTGTGCCG...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGGAGAGAAGGAACGCTTaGGCTTATTGCTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVERRNA*AYCCLP
Trigger: TGGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTC...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ATTAAAACCAAGTCCCCCAAACCTCCTGAAACATCGTTAGCAAGGAGCTACTGCCACTGCTGCTGGTTCTaGCCGAATGCAATCGCTTGC +
Preference number: 4 (lower is better)
Translates to: IKTKSPKPPETSLARSYCHCCWF*PNAIAC
Trigger: GCAAGCGATTGCATTCGGTCAGAACCAGCAGCAGTG...GCAGTAGCTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGACTTGGTTTTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTGGCCAGCAGACTTCGTaGGGTGCTGCTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVGQQTS*GAAGWW
Trigger: CCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCC...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGCCCGAAAAGCTAGACTaGCTGCCCACTTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQPEKLD*LPTFPS
Trigger: GCTGGGGAAAGTGGGCAGTCAGTCTAGCTTTTCGGG...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTCAGGGTCTACCTACCTaGCCCCCAAGCTGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSQGLPT*PPSWLS
Trigger: ACTGAGCCAGCTTGGGGGTCAGGTAGGTAGACCCTG...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGGCATCAGCTCCTTGTTaGGGACATCTCGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SEAERAKTSALAENLKVLASAPC*GHLAGS
Trigger: GCTGCCAGCGAGATGTCCTCAACAAGGAGCTGATGC...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTTTGGCTGAGAATTTaGAGGTGCTGCTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFLWLRI*RCCCSA
Trigger: AGCAGAGCAGCAGCACCTTCAAATTCTCAGCCAAAG...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGTCCCTCCTTTGGCAACTTaGGTGGTGGTGTTCCCACCG +
Preference number: 4 (lower is better)
Translates to: TAWPWLCTLFTTDQNSMVPPLAT*VVVFPP
Trigger: CGGTGGGAACACCACCACTCAAGTTGCCAAAGGAGG...GACCATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp CTTCTTCTCATAGTCCAGGAGTTGGCCCAGAAAATTGAAGTTTGGAGATATAGTCTGTCTGCGGACAGGTaGAGCCCACTGAGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: LLLIVQELAQKIEVWRYSLSADR*SPLSAC
Trigger: ACAGGCGCTCAGTGGGCTGCACCTGTCCGCAGACAG...ACTATATCTCCAAACTTCAATTTTCTGGGCCAACTCCTGGACTATGAGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGACGCTCCCACTTCGATaGAGTGGAGATAAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSETLPLR*SGDKRD
Trigger: GTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGT...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCAGACTTCGTGAGGTGCTaGTGGCTGGTGGAAAGGCCG +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPDFVRC*WLVERP
Trigger: CGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTC...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGGCCAAGATATCCGAGTaGCAGCCCTTAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SEAERAKTSALAENLKVLAKISE*QPLRPR
Trigger: CCTGGGCCTTAAGGGCTGGCACTCGGATATCTTGGC...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTGCCAAGATATCCGAGTaGCAGCCCTTAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGAKISE*QPLRPR
Trigger: CCTGGGCCTTAAGGGCTGGCACTCGGATATCTTGGC...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTCAGAGTAACTGGCACTaGCTCCGTAGATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QVSFFSGDLNDFHAARKAQSNWH*LRRWLR
Trigger: CCTCAGCCATCTACGGAGGCAGTGCCAGTTACTCTG...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTAAGGGGCTCTCTTCATaGCAGCTCCGCCGCGAGTCA +
Preference number: 4 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSKGLSS*QLRRES
Trigger: TGACTCGCGGCGGAGCTGGCATGAAGAGAGCCCCTT...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGCCAATCCCATTCTGCTaGATCAGCTCCTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEPIPFC*ISSLLR
Trigger: CCTCAACAAGGAGCTGATGCAGCAGAATGGGATTGG...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTTGGACTGAAAGCTTTTaGGGCCGCCGACCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: QVSFFSGDLNDFHAARKAWTESF*GRRPPN
Trigger: ATTGGGAGGTCGGCGGCCCCAAAAGCTTTCAGTCCA...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GAGACAGCAGGGACAGGTTCATTTGGCTTCTCCAGGTGCAGCAGCTTGAGTTTGTTTAATTTGCCACGATaGTGTAATGGTGGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ETAGTGSFGFSRCSSLSLFNLPR*CNGGVL
Trigger: GAGCACACCACCATTACATCATCGTGGCAAATTAAA...CAAACTCAAGCTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTGCTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGAACCTTATGTTTCGCTaGATGCTGGATGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVNLMFR*MLDELC
Trigger: ACAGAGCTCATCCAGCATTCAGCGAAACATAAGGTT...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ATTAAAACCAAGTCCCCCAAACCTCCTGAAACATCGTTAGCAAGGAGCTACTGCGGCACACGCAGGAAATaGGACTCGGGGATAAAGTCA +
Preference number: 4 (lower is better)
Translates to: IKTKSPKPPETSLARSYCGTRRK*DSGIKS
Trigger: TGACTTTATCCCCGAGTCTCATTTCCTGCGTGTGCC...GCAGTAGCTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGACTTGGTTTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGTCTTTCTGTCCACCCTCTaGGACAGCAGGGACAGGTTC +
Preference number: 4 (lower is better)
Translates to: TAWPWLCTLFTTDQNSMVFLSTL*DSRDRF
Trigger: GAACCTGTCCCTGCTGTCTCAGAGGGTGGACAGAAA...GACCATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGTTGTCCTGCTGCCTCTaGGGTAGCAGAGTCGGCACA +
Preference number: 4 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWLSCCL*GSRVGT
Trigger: TGTGCCGACTCTGCTACCTCAGAGGCAGCAGGACAA...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ATTAAAACCAAGTCCCCCAAACCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTGCTCCGATAGTTCCTaGACAGGGGAGAACTGGCAT +
Preference number: 4 (lower is better)
Translates to: IKTKSPKPPETSLARSYCCSDSS*TGENWH
Trigger: ATGCCAGTTCTCCCCTGTTCAGGAACTATCGGAGCA...GCAGTAGCTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGACTTGGTTTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCCCGAAAAGCTAGACTaGCTGCCCACTTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWPEKLD*LPTFPS
Trigger: GCTGGGGAAAGTGGGCAGTCAGTCTAGCTTTTCGGG...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTGCATCAGCTCCTTGTTaGGGACATCTCGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSASAPC*GHLAGS
Trigger: GCTGCCAGCGAGATGTCCTCAACAAGGAGCTGATGC...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTTCCCCAATTACATGCTaGAGAGAGCCAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGSPITC*REPATT
Trigger: GGTGGTGGCTGGCTCTCTTCAGCATGTAATTGGGGA...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp TGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCAAAATGTAAGGATGCTGCCATaGTGGCTGAATATGAAACTG +
Preference number: 4 (lower is better)
Translates to: CLRRWLRQSRSVRTLWQNVRMLP*WLNMKL
Trigger: CAGTTTCATATTCAGCCAGCATGGCAGCATCCTTAC...ATTTTGCCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp AAAACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGAAGGCCTGGCGGTCTaGAGCTTCTTGGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: KTAWPWLCTLFTTDQNSMEGLAV*SFLGML
Trigger: CAGCATCCCCAAGAAGCTGCAGACCGCCAGGCCTTC...CATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp CTTCTTCTCATAGTCCAGGAGTTGGCCCAGAAAATTGAAGTTTGGAGATATAGTGACTTCGTGAGGTGCTaGTGGCTGGTGGAAAGGCCG +
Preference number: 4 (lower is better)
Translates to: LLLIVQELAQKIEVWRYSDFVRC*WLVERP
Trigger: CGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTC...ACTATATCTCCAAACTTCAATTTTCTGGGCCAACTCCTGGACTATGAGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGGCAGACTTCGTGAGGTaGTGCTGGCTGGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWADFVR*CWLVER
Trigger: CCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGC...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGCAGAGTAACTGGCACTaGCTCCGTAGATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SEAERAKTSALAENLKVLQSNWH*LRRWLR
Trigger: CCTCAGCCATCTACGGAGGCAGTGCCAGTTACTCTG...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp TGGCACTGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGTTGGACAGGTATTGCTaGCATTTAACACATAACCAA +
Preference number: 4 (lower is better)
Translates to: WHCLRRWLRQSRSVRTLWLDRYC*HLTHNQ
Trigger: TTGGTTATGTGTTAAATGCCAGCAATACCTGTCCAA...CCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTGGCTGTCTGAAGGCCTaGCGGTCTGCAGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PPETSLARSYCFPFLNMFGCLKA*RSAASW
Trigger: CCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCC...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCATGCAATCGCTTGCTCTaGCTGTCTGAAGGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPCNRLL*LSEGLA
Trigger: CGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTTTCGTGAGGTGCTGCTaGCTGGTGGAAAGGCCGAAA +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGFVRCC*LVERPK
Trigger: TTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAA...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTGTCAGCTCTGTCACTTaGCTTCTGCCGCCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: PPETSLARSYCFPFLNMFVSSVT*LLPPAH
Trigger: GTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGAC...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp AAAACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGTCAGCTCTGTCACTTaGCTTCTGCCGCCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: KTAWPWLCTLFTTDQNSMVSSVT*LLPPAH
Trigger: GTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGAC...CATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGAGTGAGAAAACAGTCTaGAGAGAGAGAGGCAACATC +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSESEKTV*RERGNI
Trigger: GATGTTGCCTCTCTCTCTTCAGACTGTTTTCTCACT...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGGGCACACGCAGGAAATaGGACTCGGGGATAAAGTCA +
Preference number: 4 (lower is better)
Translates to: SEAERAKTSALAENLKVLGTRRK*DSGIKS
Trigger: TGACTTTATCCCCGAGTCTCATTTCCTGCGTGTGCC...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ATTAAAACCAAGTCCCCCAAACCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTGCTCTTTGGCCCTaGTGCTCCAGTCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: IKTKSPKPPETSLARSYCFALWP*CSSLVL
Trigger: AAGAACCAGACTGGAGCATCAGGGCCAAAGAGCAAA...GCAGTAGCTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGACTTGGTTTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTCTTGCTCTGGCTGTCTaGAGGCCTGGCGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TSTQPTSRSPVILSVVNILALAV*RPGGLQ
Trigger: CTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAG...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ATTAAAACCAAGTCCCCCAAACCTCCTGAAACATCGTTAGCAAGGAGCTACTGCCTCAGGAGACCTCAATaGTTTCCATGCTGCCCGAAA +
Preference number: 4 (lower is better)
Translates to: IKTKSPKPPETSLARSYCLRRPQ*FPCCPK
Trigger: TTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAG...GCAGTAGCTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGACTTGGTTTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GAGACAGCAGGGACAGGTTCATTTGGCTTCTCCAGGTGCAGCAGCTTGAGTTTGGAGAGAAGTATTAGCTaGTCTCTCAAATGCAGATGT +
Preference number: 4 (lower is better)
Translates to: ETAGTGSFGFSRCSSLSLERSIS*SLKCRC
Trigger: ACATCTGCATTTGAGAGATCAGCTAATACTTCTCTC...CAAACTCAAGCTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTGCTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTCAGGGTCTACCTACCTaGCCCCCAAGCTGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVQGLPT*PPSWLS
Trigger: ACTGAGCCAGCTTGGGGGTCAGGTAGGTAGACCCTG...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTGTCCGTCCAGCAGAGTaGTGCTCGTGTCCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TSTQPTSRSPVILSVVNIVRPAE*CSCPSA
Trigger: AGCCGAGGGACACGAGCATCACTCTGCTGGACGGAC...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGTCCCACCTGCAAGCAGGTaGACAGAGTTGAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TAWPWLCTLFTTDQNSMVPPASR*TELKLF
Trigger: GAAGAGCTTCAACTCTGTTCACCTGCTTGCAGGTGG...GACCATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTGAAGGGAAAGAACAATaGCAACACCCGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PPETSLARSYCFPFLNMFEGKEQ*QHPPSP
Trigger: GGGGCTGGGCGGGTGTTGTCATTGTTCTTTCCCTTC...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGGTCCCCCAAACCTCCTaGAACATCGTTAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQVPQTS*NIVSKE
Trigger: CTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGAC...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTAAAGGCTGTAGGATGTaGCTACATCACAGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFKGCRM*LHHSSR
Trigger: TCTGGAACTGTGATGTAGTCACATCCTACAGCCTTT...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp TGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCAAAATAACACTTTGTCCTGTTaGAACCTTCGCTTCATAAGC +
Preference number: 4 (lower is better)
Translates to: CLRRWLRQSRSVRTLWQNNTLSC*NLRFIS
Trigger: GCTTATGAAGCGAAGGTTGCAACAGGACAAAGTGTT...ATTTTGCCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGAACACTTTGTCCTGTTaGAACCTTCGCTTCATAAGC +
Preference number: 4 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVNTLSC*NLRFIS
Trigger: GCTTATGAAGCGAAGGTTGCAACAGGACAAAGTGTT...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATGTCTTCCAGCCTGTCTaGGGACAGGTGCAGCCCACT +
Preference number: 4 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNVFQPV*GQVQPT
Trigger: AGTGGGCTGCACCTGTCCGCAGACAGGCTGGAAGAC...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GATATCCAGAGAGAAGGAACGCTTGAGCTTATTGCTGTCTTCCAGCCTGTCTGCGTAAGGATGCTGCCATaGTGGCTGAATATGAAACTG +
Preference number: 4 (lower is better)
Translates to: DIQREGTLELIAVFQPVCVRMLP*WLNMKL
Trigger: CAGTTTCATATTCAGCCAGCATGGCAGCATCCTTAC...GCAGACAGGCTGGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCTGGATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCACCGAATGCAATCGCTTaGTCTGGCTGTCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPPNAIA*SGCLKA
Trigger: GGCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGG...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp AAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTTGATATCCAGAGAGAAGCCGAATGCAATCGCTTaGTCTGGCTGTCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: KDAAMLAEYETDLISREKPNAIA*SGCLKA
Trigger: GGCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGG...CTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CTTCTTCTCATAGTCCAGGAGTTGGCCCAGAAAATTGAAGTTTGGAGATATAGTGCAGACTTCGTGAGGTaGTGCTGGCTGGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LLLIVQELAQKIEVWRYSADFVR*CWLVER
Trigger: CCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGC...ACTATATCTCCAAACTTCAATTTTCTGGGCCAACTCCTGGACTATGAGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCACAGAGTAACTGGCACTaGCTCCGTAGATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPQSNWH*LRRWLR
Trigger: CCTCAGCCATCTACGGAGGCAGTGCCAGTTACTCTG...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTAAGGGGCTCTCTTCATaGCAGCTCCGCCGCGAGTCA +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVKGLSS*QLRRES
Trigger: TGACTCGCGGCGGAGCTGGCATGAAGAGAGCCCCTT...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTCTGAGGTACTGGGTTTaGTCTAAGGTAGACCTTGGC +
Preference number: 4 (lower is better)
Translates to: QVSFFSGDLNDFHAARKALRYWV*SKVDLG
Trigger: GCCAAGGTCTACCTTAGAGCAAACCCAGTACCTCAG...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGCCTACCTATTCACAATaGCTAGAAAATGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVPTYSQ*LENGLP
Trigger: TGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGG...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGGCTTGGCCATGGCTTTaGACTCTATTCACAACTGAT +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEAWPWL*TLFTTD
Trigger: ATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGC...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGCAACAAAAGATGCTTTaGAGCAGCCAGCGCATTACA +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEQQKML*SSQRIT
Trigger: TGTAATGCGCTGGCTGCTCCAAAGCATCTTTTGTTG...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp ACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGTCAGGGACAGGTTCATTTaGCTTCTCCAGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TAWPWLCTLFTTDQNSMVRDRFI*LLQVQQ
Trigger: CTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCT...GACCATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGAGGGACAGGTTCATTTaGCTTCTCCAGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQRDRFI*LLQVQQ
Trigger: CTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCT...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp TGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCAAAATAGGATGCTGCCATGCTaGCTGAATATGAAACTGATT +
Preference number: 4 (lower is better)
Translates to: CLRRWLRQSRSVRTLWQNRMLPC*LNMKLI
Trigger: AATCAGTTTCATATTCAGCCAGCATGGCAGCATCCT...ATTTTGCCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTGATAAAAGGGACCTCTaGGCGGTGCCACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PPETSLARSYCFPFLNMFDKRDL*AVPLLL
Trigger: CAGCAGCAGTGGCACCGCCCAGAGGTCCCTTTTATC...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCATTCGTGAGGTGCTGCTaGCTGGTGGAAAGGCCGAAA +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPFVRCC*LVERPK
Trigger: TTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAA...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp AAAACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGAAGGGGTAGAGGTCTaGGGGGCCAAGATATCCGAG +
Preference number: 4 (lower is better)
Translates to: KTAWPWLCTLFTTDQNSMEGVEV*GAKISE
Trigger: CTCGGATATCTTGGCCCCCCAGACCTCTACCCCTTC...CATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTCACTGCCTCCGTAGATaGCTGAGGCAGAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGHCLRR*LRQSRS
Trigger: ACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTG...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTTGTAGGCAGAGTAACTaGCACTGCCTCCGTAGATGG +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGCRQSN*HCLRRW
Trigger: CCATCTACGGAGGCAGTGCCAGTTACTCTGCCTACA...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGGGGTTGGCCCAATGTTaGCAACAGGTAAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SEAERAKTSALAENLKVLGLAQC*QQVSKA
Trigger: AGCCTTGCTTACCTGTTGCCAACATTGGGCCAACCC...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCAGGCACACGCAGGAAATaGGACTCGGGGATAAAGTCA +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPGTRRK*DSGIKS
Trigger: TGACTTTATCCCCGAGTCTCATTTCCTGCGTGTGCC...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGCTCAATGAAATCTACTaGTTTGTCCAACCACGGCAA +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSELNEIY*FVQPRQ
Trigger: TTGCCGTGGTTGGACAAATCAGTAGATTTCATTGAG...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGTTTGCTCTTTGGCCCTaGTGCTCCAGTCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SEAERAKTSALAENLKVLFALWP*CSSLVL
Trigger: AAGAACCAGACTGGAGCATCAGGGCCAAAGAGCAAA...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCATTTCTGTCCACCCTCTaGGACAGCAGGGACAGGTTC +
Preference number: 4 (lower is better)
Translates to: ETSLARSYCFPFLNMFWAFLSTL*DSRDRF
Trigger: GAACCTGTCCCTGCTGTCTCAGAGGGTGGACAGAAA...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTTTGTCCTGCTGCCTCTaGGGTAGCAGAGTCGGCACA +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVLSCCL*GSRVGT
Trigger: TGTGCCGACTCTGCTACCTCAGAGGCAGCAGGACAA...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGTGCTCCGATAGTTCCTaGACAGGGGAGAACTGGCAT +
Preference number: 4 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWCSDSS*TGENWH
Trigger: ATGCCAGTTCTCCCCTGTTCAGGAACTATCGGAGCA...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTCACTGCTGCTGGTTCTaGCCGAATGCAATCGCTTGC +
Preference number: 4 (lower is better)
Translates to: PPETSLARSYCFPFLNMFHCCWF*PNAIAC
Trigger: GCAAGCGATTGCATTCGGTCAGAACCAGCAGCAGTG...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTCTCAGGAGACCTCAATaGTTTCCATGCTGCCCGAAA +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGLRRPQ*FPCCPK
Trigger: TTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAG...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCACCCGACTTTCCTGTCTaGGGTACTGGGTTTGCTCTA +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPPDFPV*GTGFAL
Trigger: TAGAGCAAACCCAGTACCTCAGACAGGAAAGTCGGG...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGAACTTCAAGCGCGGATaGGGTCATTGGTTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVNFKRG*GHWFKN
Trigger: ATTTTTAAACCAATGACCTCATCCGCGCTTGAAGTT...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCAATTTGCTTTTTCCACTaGAGACACGCCGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPICFFH*RHAGQR
Trigger: ACGCTGGCCGGCGTGTCTTCAGTGGAAAAAGCAAAT...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCAGTCCCCCAAACCTCCTaGAACATCGTTAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPVPQTS*NIVSKE
Trigger: CTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGAC...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGAAGAGAAGCCCTAAATaGCAGAAGCTCATTAAAACC +
Preference number: 4 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVKRSPK*QKLIKT
Trigger: GGTTTTAATGAGCTTCTGTCATTTAGGGCTTCTCTT...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTCCTCCTTTGGCAACTTaGGTGGTGGTGTTCCCACCG +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVPPLAT*VVVFPP
Trigger: CGGTGGGAACACCACCACTCAAGTTGCCAAAGGAGG...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGAAATCCTCATTTAAGTaGGAACAGGACAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVKSSFK*EQDRFH
Trigger: GTGAAACCTGTCCTGTTCTCACTTAAATGAGGATTT...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTGAGCAGAGAGGTTGTTaGGATGTATGTGGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGEQRGC*DVCGKD
Trigger: GTCCTTGCCACATACATCTCAACAACCTCTCTGCTC...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ATTAAAACCAAGTCCCCCAAACCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTGGAAGCCTCTCACTaGAACAACTGTTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: IKTKSPKPPETSLARSYCLEASH*NNCSSC
Trigger: ACAGGAGGAACAGTTGTTTCAGTGAGAGGCTTCCAA...GCAGTAGCTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGACTTGGTTTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTTCTTTCCCGTTGATGTaGTCTTGCAAAGGACTCCGT +
Preference number: 4 (lower is better)
Translates to: QVSFFSGDLNDFHAARKASFPLM*SCKGLR
Trigger: ACGGAGTCCTTTGCAAGAGCACATCAACGGGAAAGA...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp AAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTTGATATCCAGAGAGAAGCCAATCCCATTCTGCTaGATCAGCTCCTGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: KDAAMLAEYETDLISREKPIPFC*ISSCKQ
Trigger: CTGCTTGCAGGAGCTGATGCAGCAGAATGGGATTGG...CTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTATCCCAGCTAAACAGTaGACTAGAACACATCCATTG +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFIPAKQ*TRTHPL
Trigger: CAATGGATGTGTTCTAGTGCACTGTTTAGCTGGGAT...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGACGCTCCCACTTCGATaGAGTGGAGATAAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQTLPLR*SGDKRD
Trigger: GTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGT...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTAAGTGGGCAGCTGGCTaGAGCTGTAGGCAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: PPETSLARSYCFPFLNMFKWAAG*SCRQSN
Trigger: GTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTT...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTCTGAGGTACTGGGTTTaGTCTAAGGTAGACCTTGGC +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGLRYWV*SKVDLG
Trigger: GCCAAGGTCTACCTTAGAGCAAACCCAGTACCTCAG...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCCCACGGGAATTTTGTaGATAGACAGTTTGAATTGG +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFPTGIL*IDSLNW
Trigger: CCAATTCAAACTGTCTATGCACAAAATTCCCGTGGG...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGCTCAGCAAACCCACCTaGAAGCAGGTGAACAGAGTT +
Preference number: 4 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQLSKPT*KQVNRV
Trigger: AACTCTGTTCACCTGCTTGCAGGTGGGTTTGCTGAG...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp ACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGTCCCTCCTATGTTCAGCTaGCAGGACCGATTCCATACA +
Preference number: 4 (lower is better)
Translates to: TAWPWLCTLFTTDQNSMVPPMFS*QDRFHT
Trigger: TGTATGGAATCGGTCCTGGCAGCTGAACATAGGAGG...GACCATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGCCTCCTATGTTCAGCTaGCAGGACCGATTCCATACA +
Preference number: 4 (lower is better)
Translates to: SEAERAKTSALAENLKVLPPMFS*QDRFHT
Trigger: TGTATGGAATCGGTCCTGGCAGCTGAACATAGGAGG...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTGACAGGTTTCACCACTaGCTCCTTTGGCAACTTGAG +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGDRFHH*LLWQLE
Trigger: CTCAAGTTGCCAAAGGAGGCAGTGGTGAAACCTGTC...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGCAGCTCTTCAACAATTaGCCTTCCTGTTTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEQLFNN*PSCFSC
Trigger: ACAGGAAAAACAGGAAGGGCAATTGTTGAAGAGCTG...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp AAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTTGATATCCAGAGAGAAGAGGGACAGGTTCATTTaGCTTCTCCAGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KDAAMLAEYETDLISREKRDRFI*LLQVQQ
Trigger: CTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCT...CTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CCA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCACCTCCTTATCAGGACTaGTTTCGGGAGTCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: ETSLARSYCFPFLNMFWAPPYQD*FRESAP
Trigger: CGGAGCAGACTCCCGAAACCAGTCCTGATAAGGAGG...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGTGTAGGCAGAGTAACTaGCACTGCCTCCGTAGATGG +
Preference number: 4 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWCRQSN*HCLRRW
Trigger: CCATCTACGGAGGCAGTGCCAGTTACTCTGCCTACA...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGTTGTTGAGATGTATGTaGCAAGGACAAAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSELLRCM*QGQRTA
Trigger: AGCTGTCCTTTGTCCTTGCCACATACATCTCAACAA...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCAAGCACTGTCAGCAACTaGCCTGAACTTCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPSTVSN*PELQAL
Trigger: GAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCT...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTCTTTCTCTTTCCCGTTaGTGTGCTCTTGCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGLSLSR*CALAKD
Trigger: GTCCTTTGCAAGAGCACATCAACGGGAAAGAGAAAG...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGCAAGAGCCCTCCAAGTaGATGTCTCTTTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SEAERAKTSALAENLKVLQEPSK*MSLSLS
Trigger: GGAAAGAGAAAGAGACATTCACTTGGAGGGCTCTTG...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGTCCAAGAGCCCTCCAAGTaGATGTCTCTTTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TAWPWLCTLFTTDQNSMVQEPSK*MSLSLS
Trigger: GGAAAGAGAAAGAGACATTCACTTGGAGGGCTCTTG...GACCATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTTGTACTAAAAGTGTATaGGGTCAGGCTGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGCTKSV*GQAGGD
Trigger: GTCACCACCAGCCTGACCTCATACACTTTTAGTACA...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTCAGTAACAATTTaGGTTCCAATCATCTCATGG +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFLSVTI*VPIISW
Trigger: CCATGAGATGATTGGAACTCAAATTGTTACTGAGAG...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CTTCTTCTCATAGTCCAGGAGTTGGCCCAGAAAATTGAAGTTTGGAGATATAGTGGCACACGCAGGAAATaGGACTCGGGGATAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LLLIVQELAQKIEVWRYSGTRRK*DSGIKS
Trigger: TGACTTTATCCCCGAGTCTCATTTCCTGCGTGTGCC...ACTATATCTCCAAACTTCAATTTTCTGGGCCAACTCCTGGACTATGAGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCATTTGCTCTTTGGCCCTaGTGCTCCAGTCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPFALWP*CSSLVL
Trigger: AAGAACCAGACTGGAGCATCAGGGCCAAAGAGCAAA...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGGAGAGAAGGAACGCTTaGGCTTATTGCTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SEAERAKTSALAENLKVLERRNA*AYCCLP
Trigger: TGGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTC...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp CTTCTTCTCATAGTCCAGGAGTTGGCCCAGAAAATTGAAGTTTGGAGATATAGTTGCTCCGATAGTTCCTaGACAGGGGAGAACTGGCAT +
Preference number: 4 (lower is better)
Translates to: LLLIVQELAQKIEVWRYSCSDSS*TGENWH
Trigger: ATGCCAGTTCTCCCCTGTTCAGGAACTATCGGAGCA...ACTATATCTCCAAACTTCAATTTTCTGGGCCAACTCCTGGACTATGAGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTCACTGCTGCTGGTTCTaGCCGAATGCAATCGCTTGC +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVHCCWF*PNAIAC
Trigger: GCAAGCGATTGCATTCGGTCAGAACCAGCAGCAGTG...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTACCTGTTCTCTGACATaGTGCTCTCTCCAAATTCCA +
Preference number: 4 (lower is better)
Translates to: QVSFFSGDLNDFHAARKATCSLT*CSLQIP
Trigger: TGGAATTTGGAGAGAGCATCATGTCAGAGAACAGGT...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp AAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTTGATATCCAGAGAGAAGCTCAGGAGACCTCAATaGTTTCCATGCTGCCCGAAA +
Preference number: 4 (lower is better)
Translates to: KDAAMLAEYETDLISREKLRRPQ*FPCCPK
Trigger: TTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAG...CTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTGAGAGAAGTATTAGCTaGTCTCTCAAATGCAGATGT +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFERSIS*SLKCRC
Trigger: ACATCTGCATTTGAGAGATCAGCTAATACTTCTCTC...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTCCCTCGGCTGTCAGGTaGGCGTGGGTTTGTGAATCA +
Preference number: 4 (lower is better)
Translates to: TSTQPTSRSPVILSVVNIPSAVR*AWVCES
Trigger: TGATTCACAAACCCACGCTCACCTGACAGCCGAGGG...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTTCCTGGTGGTTCAGCTaGATCCTAGACAGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSSWWFS*ILDSFP
Trigger: AGGGAAACTGTCTAGGATTCAGCTGAACCACCAGGA...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTCTTTGGCTGAGAATTTaGAGGTGCTGCTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSLWLRI*RCCCSA
Trigger: AGCAGAGCAGCAGCACCTTCAAATTCTCAGCCAAAG...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ATTAAAACCAAGTCCCCCAAACCTCCTGAAACATCGTTAGCAAGGAGCTACTGCAAAGGCTGTAGGATGTaGCTACATCACAGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: IKTKSPKPPETSLARSYCKGCRM*LHHSSR
Trigger: TCTGGAACTGTGATGTAGTCACATCCTACAGCCTTT...GCAGTAGCTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGACTTGGTTTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGTCTATCTCTGGAGGCTaGTTTATTCTAATTCCCTTT +
Preference number: 4 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVSISGG*FILIPF
Trigger: AAAGGGAATTAGAATAAATCAGCCTCCAGAGATAGA...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGTTGGAAGCCTCTCACTaGAACAACTGTTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SEAERAKTSALAENLKVLLEASH*NNCSSC
Trigger: ACAGGAGGAACAGTTGTTTCAGTGAGAGGCTTCCAA...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATTGTCAGCAACTGGCCTaGACTTCAGGCTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNCQQLA*TSGSPK
Trigger: CTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACA...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTTCTTTCCCGTTGATGTaGTCTTGCAAAGGACTCCGT +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGSFPLM*SCKGLR
Trigger: ACGGAGTCCTTTGCAAGAGCACATCAACGGGAAAGA...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCCTCCTTCTTTAATTTaGCACGATGATGTAATGGTG +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFPPSLI*HDDVMV
Trigger: CACCATTACATCATCGTGGCAAATTAAAGAAGGAGG...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCATTTGGCTTCTCCAGGTaGAGCAGCTTGAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPFGFSR*SSLSLL
Trigger: GAGCAAACTCAAGCTGCTGCACCTGGAGAAGCCAAA...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTCAGAGTAACTGGCACTaGCTCCGTAGATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVQSNWH*LRRWLR
Trigger: CCTCAGCCATCTACGGAGGCAGTGCCAGTTACTCTG...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCACTCAGCAAACCCACCTaGAAGCAGGTGAACAGAGTT +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPLSKPT*KQVNRV
Trigger: AACTCTGTTCACCTGCTTGCAGGTGGGTTTGCTGAG...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCACTGAGGACGCCCCTTTaGTCTCGCTCCATTTTGATT +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPLRTPL*SRSILI
Trigger: AATCAAAATGGAGCGAGAGCAAAGGGGCGTCCTCAG...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGTTAGCAAGGAGCTACTaGTTTCCTTTCTTAAACATG +
Preference number: 4 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVLARSY*FPFLNM
Trigger: CATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAA...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGGGCTCTCCCAAGATCTaGATCTTCTCATTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWGSPKI*IFSLEA
Trigger: GGCTTCCAATGAGAAGATGCAGATCTTGGGAGAGCC...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTGGCTCTCCCAAGATCTaGATCTTCTCATTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSGSPKI*IFSLEA
Trigger: GGCTTCCAATGAGAAGATGCAGATCTTGGGAGAGCC...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCAAGTGTGAGGACTCTGTaGCAAAATACCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPSVRTL*QNTSCW
Trigger: CCAGCAGCTGGTATTTTGCCACAGAGTCCTCACACT...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGTAGGCAGAGTAACTaGCACTGCCTCCGTAGATGG +
Preference number: 4 (lower is better)
Translates to: PPETSLARSYCFPFLNMFCRQSN*HCLRRW
Trigger: CCATCTACGGAGGCAGTGCCAGTTACTCTGCCTACA...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGTCTCCAAATTCCATTTaGCAGCTTCTGCGTTTAAAC +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSESPNSI*QLLRLN
Trigger: GTTTAAACGCAGAAGCTGCCAAATGGAATTTGGAGA...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp AAAACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGGGTTGGCCCAATGTTaGCAACAGGTAAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: KTAWPWLCTLFTTDQNSMGLAQC*QQVSKA
Trigger: AGCCTTGCTTACCTGTTGCCAACATTGGGCCAACCC...CATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGTGGCAACTTGAGTGGTaGTGTTCCCACCGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQWQLEW*CSHRVY
Trigger: ATAAACTCGGTGGGAACACCACCACTCAAGTTGCCA...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
3UTR CAA 72 bp TCTGCCTTCACTTTACACCCCATCATAGCACATTATTaGTGCACAACTAGTGAGGTCTGTGCGGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: SAFTLHPIIAHY*CTTSEVCAAHH
Trigger: ATGATGAGCCGCACAGACCTCACTAGTTGTGCACAAATAATGTGCTATGATGGGGTGTAAAGTGAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGTGTACTAAAAGTGTATaGGGTCAGGCTGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWCTKSV*GQAGGD
Trigger: GTCACCACCAGCCTGACCTCATACACTTTTAGTACA...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp AAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTTGATATCCAGAGAGAAGGAGAGAAGGAACGCTTaGGCTTATTGCTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KDAAMLAEYETDLISREKERRNA*AYCCLP
Trigger: TGGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTC...CTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp AAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTTGATATCCAGAGAGAAGGGCAGAGTAGAAGTGTaGGGACTCTGTGGCAAAATA +
Preference number: 4 (lower is better)
Translates to: KDAAMLAEYETDLISREKGRVEV*GLCGKI
Trigger: TATTTTGCCACAGAGTCCTCACACTTCTACTCTGCC...CTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGACCTGTTCTCTGACATaGTGCTCTCTCCAAATTCCA +
Preference number: 4 (lower is better)
Translates to: SEAERAKTSALAENLKVLTCSLT*CSLQIP
Trigger: TGGAATTTGGAGAGAGCATCATGTCAGAGAACAGGT...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTGGATGTGTAATTCACTaGATAAAATGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFGCVIH*IKWFSS
Trigger: GGAGGAAAACCATTTTATTCAGTGAATTACACATCC...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTCCCGACTTTCCTGTCTaGGGTACTGGGTTTGCTCTA +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVPDFPV*GTGFAL
Trigger: TAGAGCAAACCCAGTACCTCAGACAGGAAAGTCGGG...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCATCCTGGTGGTTCAGCTaGATCCTAGACAGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: ETSLARSYCFPFLNMFWASWWFS*ILDSFP
Trigger: AGGGAAACTGTCTAGGATTCAGCTGAACCACCAGGA...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTATTTGCTTTTTCCACTaGAGACACGCCGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVICFFH*RHAGQR
Trigger: ACGCTGGCCGGCGTGTCTTCAGTGGAAAAAGCAAAT...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTACAGTGATTGTAGGTTaGGGACTGAGGACGCCCCTT +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVTVIVG*GLRTPL
Trigger: AAGGGGCGTCCTCAGTCCTCAACCTACAATCACTGT...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGATCCGGTGTTCCATGTaGATGACAGAACACGGAATA +
Preference number: 4 (lower is better)
Translates to: SEAERAKTSALAENLKVLIRCSM*MTEHGI
Trigger: TATTCCGTGTTCTGTCATTCACATGGAACACCGGAT...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp AAAACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGAGCAGAGAGGTTGTTaGGATGTATGTGGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: KTAWPWLCTLFTTDQNSMEQRGC*DVCGKD
Trigger: GTCCTTGCCACATACATCTCAACAACCTCTCTGCTC...CATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGATCATTCTTTACCTTTaGTCCCGCGCTCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWIILYL*SRAPTA
Trigger: AGCTGTTGGAGCGCGGGAGCAAAGGTAAAGAATGAT...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCAATCATTCTTTACCTTTaGTCCCGCGCTCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPIILYL*SRAPTA
Trigger: AGCTGTTGGAGCGCGGGAGCAAAGGTAAAGAATGAT...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCAGATGTAATGGTGGTGTaGTCAAAGGCTCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: ETSLARSYCFPFLNMFWADVMVV*SKAQPL
Trigger: GAGTGGCTGAGCCTTTGAGCACACCACCATTACATC...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGCTACAACCTTCTGACTaGAATCAATGTCAACCTTAT +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSELQPSD*NQCQPY
Trigger: ATAAGGTTGACATTGATTGCAGTCAGAAGGTTGTAG...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTGCAGCTTCTTGGGGATaGTGGCTTCCTCCTTATCAG +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVAASWG*WLPPYQ
Trigger: CTGATAAGGAGGAAGCCAGCATCCCCAAGAAGCTGC...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTCCTACCTATTCACAATaGCTAGAAAATGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: QVSFFSGDLNDFHAARKAPTYSQ*LENGLP
Trigger: TGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGG...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTATAGCACATTATTTGTaGACAACTAGTGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFIAHYL*TTSEVC
Trigger: ACAGACCTCACTAGTTGTGCACAAATAATGTGCTAT...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATCGGCTGACCCTCTTCTaGCTTCACTTTACACCCCAT +
Preference number: 4 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNRLTLF*LHFTPH
Trigger: ATGGGGTGTAAAGTGAAGGCAGAAGAGGGTCAGCCG...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp AAAACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGACAGGTTTCACCACTaGCTCCTTTGGCAACTTGAG +
Preference number: 4 (lower is better)
Translates to: KTAWPWLCTLFTTDQNSMDRFHH*LLWQLE
Trigger: CTCAAGTTGCCAAAGGAGGCAGTGGTGAAACCTGTC...CATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCATTCCACCTCTTTTTCTaGAGGGTCCTGGCCAAGATA +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPFHLFF*RVLAKI
Trigger: TATCTTGGCCAGGACCCTGCAGAAAAAGAGGTGGAA...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGTTCCACCTCTTTTTCTaGAGGGTCCTGGCCAAGATA +
Preference number: 4 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWFHLFF*RVLAKI
Trigger: TATCTTGGCCAGGACCCTGCAGAAAAAGAGGTGGAA...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGATGGCTTCCAAAATGTaGGATGTATTGTATTCCACA +
Preference number: 4 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEMASKM*DVLYST
Trigger: TGTGGAATACAATACATCCCACATTTTGGAAGCCAT...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp AAAACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGAGTGTGAGGACTCTGTaGCAAAATACCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KTAWPWLCTLFTTDQNSMSVRTL*QNTSCW
Trigger: CCAGCAGCTGGTATTTTGCCACAGAGTCCTCACACT...CATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATCACTGCCTCCGTAGATaGCTGAGGCAGAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNHCLRR*LRQSRS
Trigger: ACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTG...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp ATTAAAACCAAGTCCCCCAAACCTCCTGAAACATCGTTAGCAAGGAGCTACTGCAAAACAGCTTGGCCATaGCTTTGCACTCTATTCACA +
Preference number: 4 (lower is better)
Translates to: IKTKSPKPPETSLARSYCKTAWP*LCTLFT
Trigger: TGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT...GCAGTAGCTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGACTTGGTTTTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp AAAACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGAAGGAAGGGGGACCATaGCCAAGAGAAGCCCTAAAT +
Preference number: 4 (lower is better)
Translates to: KTAWPWLCTLFTTDQNSMKEGGP*PREALN
Trigger: ATTTAGGGCTTCTCTTGGCCATGGTCCCCCTTCCTT...CATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCAAAGGAAGGGGGACCATaGCCAAGAGAAGCCCTAAAT +
Preference number: 4 (lower is better)
Translates to: ETSLARSYCFPFLNMFWAKEGGP*PREALN
Trigger: ATTTAGGGCTTCTCTTGGCCATGGTCCCCCTTCCTT...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTTTTAATTTGCCACGATaGTGTAATGGTGGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGFNLPR*CNGGVL
Trigger: GAGCACACCACCATTACATCATCGTGGCAAATTAAA...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTAGTGAGAAAACAGTCTaGAGAGAGAGAGGCAACATC +
Preference number: 4 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSSEKTV*RERGNI
Trigger: GATGTTGCCTCTCTCTCTTCAGACTGTTTTCTCACT...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp CTTCTTCTCATAGTCCAGGAGTTGGCCCAGAAAATTGAAGTTTGGAGATATAGTGGCAGAGTAGAAGTGTaGGGACTCTGTGGCAAAATA +
Preference number: 4 (lower is better)
Translates to: LLLIVQELAQKIEVWRYSGRVEV*GLCGKI
Trigger: TATTTTGCCACAGAGTCCTCACACTTCTACTCTGCC...ACTATATCTCCAAACTTCAATTTTCTGGGCCAACTCCTGGACTATGAGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTTCCTGGTGGTTCAGCTaGATCCTAGACAGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVSWWFS*ILDSFP
Trigger: AGGGAAACTGTCTAGGATTCAGCTGAACCACCAGGA...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTCCACCTGCAAGCAGGTaGACAGAGTTGAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TSTQPTSRSPVILSVVNIPPASR*TELKLF
Trigger: GAAGAGCTTCAACTCTGTTCACCTGCTTGCAGGTGG...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTAACATGTTTTGGGCATaGCCACACTCTGGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: PPETSLARSYCFPFLNMFNMFWA*PHSGSG
Trigger: ACCACTTCCAGAGTGTGGTCATGCCCAAAACATGTT...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTTCAAATCTAGTGTCATaGGCAGAGAGGTTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGSNLVS*AERLLR
Trigger: TCTCAACAACCTCTCTGCTCATGACACTAGATTTGA...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGTCAAATCTAGTGTCATaGGCAGAGAGGTTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQSNLVS*AERLLR
Trigger: TCTCAACAACCTCTCTGCTCATGACACTAGATTTGA...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp AAAACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGTCTTTCCCGTTGATGTaGTCTTGCAAAGGACTCCGT +
Preference number: 4 (lower is better)
Translates to: KTAWPWLCTLFTTDQNSMSFPLM*SCKGLR
Trigger: ACGGAGTCCTTTGCAAGAGCACATCAACGGGAAAGA...CATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTGCTTTGGACAGGTATTaGTGGCATTTAACACATAAC +
Preference number: 4 (lower is better)
Translates to: QVSFFSGDLNDFHAARKAALDRY*WHLTHN
Trigger: GTTATGTGTTAAATGCCAGCAATACCTGTCCAAAGC...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGGTAAGGATGCTGCCATaGTGGCTGAATATGAAACTG +
Preference number: 4 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWVRMLP*WLNMKL
Trigger: CAGTTTCATATTCAGCCAGCATGGCAGCATCCTTAC...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTACGCTCCCACTTCGATaGAGTGGAGATAAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVTLPLR*SGDKRD
Trigger: GTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGT...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGGGGGATTCTAGCATCTaGCCTTCCATTTTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWGDSSI*PSIFVE
Trigger: CTCAACAAAAATGGAAGGGCAGATGCTAGAATCCCC...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCAGGGGATTCTAGCATCTaGCCTTCCATTTTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPGDSSI*PSIFVE
Trigger: CTCAACAAAAATGGAAGGGCAGATGCTAGAATCCCC...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTCTGAGGTACTGGGTTTaGTCTAAGGTAGACCTTGGC +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVLRYWV*SKVDLG
Trigger: GCCAAGGTCTACCTTAGAGCAAACCCAGTACCTCAG...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTCCCACGGGAATTTTGTaGATAGACAGTTTGAATTGG +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGPTGIL*IDSLNW
Trigger: CCAATTCAAACTGTCTATGCACAAAATTCCCGTGGG...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTCCACCCCCAAAAAGCTaGTGTTGTGAATTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSPPPKS*CCELRL
Trigger: AAGCCTTAATTCACAACAGCAGCTTTTTGGGGGTGG...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCACAACAAAAGATGCTTTaGAGCAGCCAGCGCATTACA +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPQQKML*SSQRIT
Trigger: TGTAATGCGCTGGCTGCTCCAAAGCATCTTTTGTTG...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTAGGATGCTGCCATGCTaGCTGAATATGAAACTGATT +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGRMLPC*LNMKLI
Trigger: AATCAGTTTCATATTCAGCCAGCATGGCAGCATCCT...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGAGCCAAGATAAAGATTaGGAAGAATTCGGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWSQDKD*EEFGLA
Trigger: GGCCAACCCGAATTCTTCCCAATCTTTATCTTGGCT...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp ACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGTCAAAACAGCTTGGCCATaGCTTTGCACTCTATTCACA +
Preference number: 4 (lower is better)
Translates to: TAWPWLCTLFTTDQNSMVKTAWP*LCTLFT
Trigger: TGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT...GACCATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATCTTTGGCAACTTGAGTaGTGGTGTTCCCACCGAGTT +
Preference number: 4 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNLWQLE*WCSHRV
Trigger: AACTCGGTGGGAACACCACCACTCAAGTTGCCAAAG...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTCTTTCTCTTTCCCGTTaGTGTGCTCTTGCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVLSLSR*CALAKD
Trigger: GTCCTTTGCAAGAGCACATCAACGGGAAAGAGAAAG...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTAACCTTATGTTTCGCTaGATGCTGGATGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PPETSLARSYCFPFLNMFNLMFR*MLDELC
Trigger: ACAGAGCTCATCCAGCATTCAGCGAAACATAAGGTT...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTCAATGAAATCTACTaGTTTGTCCAACCACGGCAA +
Preference number: 4 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWLNEIY*FVQPRQ
Trigger: TTGCCGTGGTTGGACAAATCAGTAGATTTCATTGAG...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTGGCAGAGTAGAAGTGTaGGGACTCTGTGGCAAAATA +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVGRVEV*GLCGKI
Trigger: TATTTTGCCACAGAGTCCTCACACTTCTACTCTGCC...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CTTCTTCTCATAGTCCAGGAGTTGGCCCAGAAAATTGAAGTTTGGAGATATAGTACCTGTTCTCTGACATaGTGCTCTCTCCAAATTCCA +
Preference number: 4 (lower is better)
Translates to: LLLIVQELAQKIEVWRYSTCSLT*CSLQIP
Trigger: TGGAATTTGGAGAGAGCATCATGTCAGAGAACAGGT...ACTATATCTCCAAACTTCAATTTTCTGGGCCAACTCCTGGACTATGAGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTGAGAGAAGTATTAGCTaGTCTCTCAAATGCAGATGT +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGERSIS*SLKCRC
Trigger: ACATCTGCATTTGAGAGATCAGCTAATACTTCTCTC...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTACTAACTCAAATCGTTaGCCAGCACTTTCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSTNSNR*PALSQY
Trigger: ATACTGGGAAAGTGCTGGTCAACGATTTGAGTTAGT...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGAAGAGAAGCCCTAAATaGCAGAAGCTCATTAAAACC +
Preference number: 4 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQKRSPK*QKLIKT
Trigger: GGTTTTAATGAGCTTCTGTCATTTAGGGCTTCTCTT...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGCTCGATTCCAAGAACTaGTTATCTGACACTAGTGAA +
Preference number: 4 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQLDSKN*LSDTSE
Trigger: TTCACTAGTGTCAGATAATCAGTTCTTGGAATCGAG...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGAAATCCTCATTTAAGTaGGAACAGGACAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: SEAERAKTSALAENLKVLKSSFK*EQDRFH
Trigger: GTGAAACCTGTCCTGTTCTCACTTAAATGAGGATTT...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCAATCCGGTGTTCCATGTaGATGACAGAACACGGAATA +
Preference number: 4 (lower is better)
Translates to: ETSLARSYCFPFLNMFWAIRCSM*MTEHGI
Trigger: TATTCCGTGTTCTGTCATTCACATGGAACACCGGAT...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGCCTCCTTCTTTAATTTaGCACGATGATGTAATGGTG +
Preference number: 4 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQPPSLI*HDDVMV
Trigger: CACCATTACATCATCGTGGCAAATTAAAGAAGGAGG...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTCCAATCCCATTCTGCTaGATCAGCTCCTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: TSTQPTSRSPVILSVVNIPIPFC*ISSLLR
Trigger: CCTCAACAAGGAGCTGATGCAGCAGAATGGGATTGG...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTACCAACTGTATCCATaGAGTGAAGCAGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PPETSLARSYCFPFLNMFYQLYP*SEAERA
Trigger: TGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTA...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp AAAACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGCCACCCCCAAAAAGCTaGTGTTGTGAATTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: KTAWPWLCTLFTTDQNSMPPPKS*CCELRL
Trigger: AAGCCTTAATTCACAACAGCAGCTTTTTGGGGGTGG...CATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp ATTAAAACCAAGTCCCCCAAACCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTGGACAGGTATTGCTaGCATTTAACACATAACCAA +
Preference number: 4 (lower is better)
Translates to: IKTKSPKPPETSLARSYCLDRYC*HLTHNQ
Trigger: TTGGTTATGTGTTAAATGCCAGCAATACCTGTCCAA...GCAGTAGCTCCTTGCTAACGATGTTTCAGGAGGTTTGGGGGACTTGGTTTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATTGGCAACTTGAGTGGTaGTGTTCCCACCGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNWQLEW*CSHRVY
Trigger: ATAAACTCGGTGGGAACACCACCACTCAAGTTGCCA...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTCTTTGGCAACTTGAGTaGTGGTGTTCCCACCGAGTT +
Preference number: 4 (lower is better)
Translates to: TSTQPTSRSPVILSVVNILWQLE*WCSHRV
Trigger: AACTCGGTGGGAACACCACCACTCAAGTTGCCAAAG...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTTTGTTGAGATGTATGTaGCAAGGACAAAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSLLRCM*QGQRTA
Trigger: AGCTGTCCTTTGTCCTTGCCACATACATCTCAACAA...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTTTAATTTGCCACGATaGTGTAATGGTGGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PPETSLARSYCFPFLNMFFNLPR*CNGGVL
Trigger: GAGCACACCACCATTACATCATCGTGGCAAATTAAA...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCACTCTCAGTAACAATTTaGGTTCCAATCATCTCATGG +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPLSVTI*VPIISW
Trigger: CCATGAGATGATTGGAACTCAAATTGTTACTGAGAG...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTAGTGAGAAAACAGTCTaGAGAGAGAGAGGCAACATC +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVSEKTV*RERGNI
Trigger: GATGTTGCCTCTCTCTCTTCAGACTGTTTTCTCACT...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp CTTCTTCTCATAGTCCAGGAGTTGGCCCAGAAAATTGAAGTTTGGAGATATAGTCTCAATGAAATCTACTaGTTTGTCCAACCACGGCAA +
Preference number: 4 (lower is better)
Translates to: LLLIVQELAQKIEVWRYSLNEIY*FVQPRQ
Trigger: TTGCCGTGGTTGGACAAATCAGTAGATTTCATTGAG...ACTATATCTCCAAACTTCAATTTTCTGGGCCAACTCCTGGACTATGAGAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR TCA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGGTAAATGTGAAAGTCTaGGGCAATCATAGAAACATC +
Preference number: 4 (lower is better)
Translates to: SEAERAKTSALAENLKVLVNVKV*GNHRNI
Trigger: GATGTTTCTATGATTGCCTCAGACTTTCACATTTAC...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTGTAAATGTGAAAGTCTaGGGCAATCATAGAAACATC +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGVNVKV*GNHRNI
Trigger: GATGTTTCTATGATTGCCTCAGACTTTCACATTTAC...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp AAAACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGACTAACTCAAATCGTTaGCCAGCACTTTCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: KTAWPWLCTLFTTDQNSMTNSNR*PALSQY
Trigger: ATACTGGGAAAGTGCTGGTCAACGATTTGAGTTAGT...CATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTAACATGTTTTGGGCATaGCCACACTCTGGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: TSTQPTSRSPVILSVVNINMFWA*PHSGSG
Trigger: ACCACTTCCAGAGTGTGGTCATGCCCAAAACATGTT...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp AAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTTGATATCCAGAGAGAAGCCTCCTTCTTTAATTTaGCACGATGATGTAATGGTG +
Preference number: 4 (lower is better)
Translates to: KDAAMLAEYETDLISREKPPSLI*HDDVMV
Trigger: CACCATTACATCATCGTGGCAAATTAAAGAAGGAGG...CTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCAAACACTTTGTCCTGTTaGAACCTTCGCTTCATAAGC +
Preference number: 4 (lower is better)
Translates to: ETSLARSYCFPFLNMFWANTLSC*NLRFIS
Trigger: GCTTATGAAGCGAAGGTTGCAACAGGACAAAGTGTT...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTGCTTTGGACAGGTATTaGTGGCATTTAACACATAAC +
Preference number: 4 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSALDRY*WHLTHN
Trigger: GTTATGTGTTAAATGCCAGCAATACCTGTCCAAAGC...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTGGGGATTCTAGCATCTaGCCTTCCATTTTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVGDSSI*PSIFVE
Trigger: CTCAACAAAAATGGAAGGGCAGATGCTAGAATCCCC...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTCCTACCTATTCACAATaGCTAGAAAATGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: PPETSLARSYCFPFLNMFPTYSQ*LENGLP
Trigger: TGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGG...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGTTAGCAAGGAGCTACTaGTTTCCTTTCTTAAACATG +
Preference number: 4 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQLARSY*FPFLNM
Trigger: CATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAA...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTTTGGACAGGTATTGCTaGCATTTAACACATAACCAA +
Preference number: 4 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGLDRYC*HLTHNQ
Trigger: TTGGTTATGTGTTAAATGCCAGCAATACCTGTCCAA...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CCA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGTCTCCAAATTCCATTTaGCAGCTTCTGCGTTTAAAC +
Preference number: 4 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWSPNSI*QLLRLN
Trigger: GTTTAAACGCAGAAGCTGCCAAATGGAATTTGGAGA...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTAGCCAAGATAAAGATTaGGAAGAATTCGGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVSQDKD*EEFGLA
Trigger: GGCCAACCCGAATTCTTCCCAATCTTTATCTTGGCT...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTACCTGTTCTCTGACATaGTGCTCTCTCCAAATTCCA +
Preference number: 4 (lower is better)
Translates to: TSTQPTSRSPVILSVVNITCSLT*CSLQIP
Trigger: TGGAATTTGGAGAGAGCATCATGTCAGAGAACAGGT...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCACTCTATTCACAACTaGTCAAAACTCAATGGTCTT +
Preference number: 4 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWHSIHN*SKLNGL
Trigger: AAGACCATTGAGTTTTGATCAGTTGTGAATAGAGTG...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTCAAGTCGGTCTGTGTTaGGTCATATCATTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: TSTQPTSRSPVILSVVNIQVGLC*VISFCA
Trigger: AGCACAGAATGATATGACTCAACACAGACCGACTTG...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCATTATGTTTCGCTGAATaGTGGATGAGCTCTGTAATT +
Preference number: 4 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPLCFAE*WMSSVI
Trigger: AATTACAGAGCTCATCCAGCATTCAGCGAAACATAA...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp AAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTTGATATCCAGAGAGAAGTTATGTTTCGCTGAATaGTGGATGAGCTCTGTAATT +
Preference number: 4 (lower is better)
Translates to: KDAAMLAEYETDLISREKLCFAE*WMSSVI
Trigger: AATTACAGAGCTCATCCAGCATTCAGCGAAACATAA...CTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTATCCCAGCTAAACAGTaGACTAGAACACATCCATTG +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVIPAKQ*TRTHPL
Trigger: CAATGGATGTGTTCTAGTGCACTGTTTAGCTGGGAT...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR GCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTAGGAAACAGGTTTCCTaGTTCTCCTCAGCAATTTGT +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVRKQVS*FSSAIC
Trigger: ACAAATTGCTGAGGAGAAGCAGGAAACCTGTTTCCT...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTGCTTGGCCATGGCTTTaGACTCTATTCACAACTGAT +
Preference number: 4 (lower is better)
Translates to: TSTQPTSRSPVILSVVNIAWPWL*TLFTTD
Trigger: ATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGC...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTCTCTCAGTAACAATTTaGGTTCCAATCATCTCATGG +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVLSVTI*VPIISW
Trigger: CCATGAGATGATTGGAACTCAAATTGTTACTGAGAG...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR TCA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCAGGATGTGTAATTCACTaGATAAAATGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ETSLARSYCFPFLNMFWAGCVIH*IKWFSS
Trigger: GGAGGAAAACCATTTTATTCAGTGAATTACACATCC...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTCTCGATTCCAAGAACTaGTTATCTGACACTAGTGAA +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVLDSKN*LSDTSE
Trigger: TTCACTAGTGTCAGATAATCAGTTCTTGGAATCGAG...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTCTACAACCTTCTGACTaGAATCAATGTCAACCTTAT +
Preference number: 4 (lower is better)
Translates to: PPETSLARSYCFPFLNMFLQPSD*NQCQPY
Trigger: ATAAGGTTGACATTGATTGCAGTCAGAAGGTTGTAG...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATGCTTTGGACAGGTATTaGTGGCATTTAACACATAAC +
Preference number: 4 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNALDRY*WHLTHN
Trigger: GTTATGTGTTAAATGCCAGCAATACCTGTCCAAAGC...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTCAGCTCTTCAACAATTaGCCTTCCTGTTTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: TSTQPTSRSPVILSVVNIQLFNN*PSCFSC
Trigger: ACAGGAAAAACAGGAAGGGCAATTGTTGAAGAGCTG...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp AAAACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGTTGGACAGGTATTGCTaGCATTTAACACATAACCAA +
Preference number: 4 (lower is better)
Translates to: KTAWPWLCTLFTTDQNSMLDRYC*HLTHNQ
Trigger: TTGGTTATGTGTTAAATGCCAGCAATACCTGTCCAA...CATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTCACTCTATTCACAACTaGTCAAAACTCAATGGTCTT +
Preference number: 4 (lower is better)
Translates to: ALPFLLREVLADLSNADVHSIHN*SKLNGL
Trigger: AAGACCATTGAGTTTTGATCAGTTGTGAATAGAGTG...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR TCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATTCTATCTCTGGAGGCTaGTTTATTCTAATTCCCTTT +
Preference number: 4 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNSISGG*FILIPF
Trigger: AAAGGGAATTAGAATAAATCAGCCTCCAGAGATAGA...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATGGCTTCCAAAATGTaGGATGTATTGTATTCCACA +
Preference number: 4 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNMASKM*DVLYST
Trigger: TGTGGAATACAATACATCCCACATTTTGGAAGCCAT...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTTTATGTTTCGCTGAATaGTGGATGAGCTCTGTAATT +
Preference number: 4 (lower is better)
Translates to: TSTQPTSRSPVILSVVNILCFAE*WMSSVI
Trigger: AATTACAGAGCTCATCCAGCATTCAGCGAAACATAA...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR GCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTATAGCACATTATTTGTaGACAACTAGTGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: TSTQPTSRSPVILSVVNIIAHYL*TTSEVC
Trigger: ACAGACCTCACTAGTTGTGCACAAATAATGTGCTAT...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CCA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTATGGCTTCCAAAATGTaGGATGTATTGTATTCCACA +
Preference number: 4 (lower is better)
Translates to: TSTQPTSRSPVILSVVNIMASKM*DVLYST
Trigger: TGTGGAATACAATACATCCCACATTTTGGAAGCCAT...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS GCA 90 bp GCCTCCCGGACTTGCGAGGCGCCGCCGCGGAGCCGAGAGGGCGGCTaGGCTCCCGCTCGCGTCCCGTCCCGTCGCTCTCCTCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: ASRTCEAPPRSREGG*APARVPSRRSPPPL
Trigger: AAGAGGAGGAGGAGAGCGACGGGACGGGACGCGAGCGGGAGCGCAGCCGCCCTCTCGGCTCCGCGGCGGCGCCTCGCAAGTCCGGGAGGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CTGAGCGCCTGTACCAGCGGGCTGTCCTCTAACAGCGACGGCTGCACGCTGGGCAGTCAGCTCTGTCACTaGGCTTCTGCCGCCTGCGCA +
Preference number: 5 (lower is better)
Translates to: LSACTSGLSSNSDGCTLGSQLCH*ASAACA
Trigger: TGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACT...GCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CTGAGCGCCTGTACCAGCGGGCTGTCCTCTAACAGCGACGGCTGCACGCTGGGCAGAGGGAAACGAAAGTaGTCACGGCGTCTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: LSACTSGLSSNSDGCTLGRGKRK*SRRLPS
Trigger: CGAGGGGAGACGCCGTGACAACTTTCGTTTCCCTCT...GCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp TCCGAGTGCCAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGCAGGGACAGGTTCATTaGGCTTCTCCAGGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SECQPLRPRPADFVRCCWQGQVH*ASPGAA
Trigger: TGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTG...CCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp ACGGCTGCACGCTGGGCACGCTGGGCACGCTGGCGGGATGCACGGGCCTTTGTCACTAGAACACATCCATaGGAGGCTTTTGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: TAARWARWARWRDARAFVTRTHP*EAFAFS
Trigger: TGAGAAAGCAAAAGCCTCCAATGGATGTGTTCTAGT...GACAAAGGCCCGTGCATCCCGCCAGCGTGCCCAGCGTGCCCAGCGTGCAGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGCTGGTGGAAAGGCCGAAAAGTCCAGGTGCAGCAGCTaGAGTTTGCTCTTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: AQASRLREVLLAGGKAEKSRCSS*SLLFGP
Trigger: AGGGCCAAAGAGCAAACTCAAGCTGCTGCACCTGGA...CTTTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CTGAGCGCCTGTACCAGCGGGCTGTCCTCTAACAGCGACGGCTGCACGCTGGGCAGAGAGAAGGAACGCTaGAGCTTATTGCTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LSACTSGLSSNSDGCTLGREKER*SLLLSS
Trigger: GGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCT...GCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp ACGGCTGCACGCTGGGCACGCTGGGCACGCTGGCGGGATGCACGGGCCTTTGTCTCTGCCCTTCCATTTTaGTTGAGAGAAGTATTAGCT +
Preference number: 5 (lower is better)
Translates to: TAARWARWARWRDARAFVSALPF*LREVLA
Trigger: AGCTAATACTTCTCTCAACAAAAATGGAAGGGCAGA...GACAAAGGCCCGTGCATCCCGCCAGCGTGCCCAGCGTGCCCAGCGTGCAGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCAAGAGGGAAACGAAAGTaGTCACGGCGTCTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRARGKRK*SRRLPS
Trigger: CGAGGGGAGACGCCGTGACAACTTTCGTTTCCCTCT...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp TCCGCCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACATCATTCTTTACCTTaGCTCCCGCGCTCCAACAGC +
Preference number: 5 (lower is better)
Translates to: SAASQLCHLASAACAQNRHHSLP*LPRSNS
Trigger: GCTGTTGGAGCGCGGGAGCAAAGGTAAAGAATGATG...TCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp ACGGCTGCACGCTGGGCACGCTGGGCACGCTGGCGGGATGCACGGGCCTTTGTCATGAAATCTACTGATTaGTCCAACCACGGCAAAATT +
Preference number: 5 (lower is better)
Translates to: TAARWARWARWRDARAFVMKSTD*SNHGKI
Trigger: AATTTTGCCGTGGTTGGACAAATCAGTAGATTTCAT...GACAAAGGCCCGTGCATCCCGCCAGCGTGCCCAGCGTGCCCAGCGTGCAGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp TTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACTACCGAATGCAATCGCTaGCTCTGGCTGTCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: LVSASGQLAAAVGRVTGTTECNR*LWLSEG
Trigger: GCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGGT...AGTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCACCCGTTGATGTGCTCTaGCAAAGGACTCCGTCCACA +
Preference number: 5 (lower is better)
Translates to: APSTVSNWPELQALPRSAPVDVL*QRTPST
Trigger: TGTGGACGGAGTCCTTTGCAAGAGCACATCAACGGG...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCATCCAGGTGCAGCAGCTaGAGTTTGCTCTTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: APSTVSNWPELQALPRSASRCSS*SLLFGP
Trigger: AGGGCCAAAGAGCAAACTCAAGCTGCTGCACCTGGA...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp TGGCACTGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGTCCAGGTGCAGCAGCTaGAGTTTGCTCTTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: WHCLRRWLRQSRSVRTLWSRCSS*SLLFGP
Trigger: AGGGCCAAAGAGCAAACTCAAGCTGCTGCACCTGGA...CCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp TGCAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTGGGGGAGAACTGGCATAGCTaGTTGGTCCCATCCAGAGTA +
Preference number: 5 (lower is better)
Translates to: CNRLLWLSEGLAVCSFLGENWHS*LVPSRV
Trigger: TACTCTGGATGGGACCAACAAGCTATGCCAGTTCTC...CCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCAACCGAATGCAATCGCTaGCTCTGGCTGTCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: APSTVSNWPELQALPRSATECNR*LWLSEG
Trigger: GCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGGT...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp CTTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACACAACAAAAGATGCTTaGGAGCAGCCAGCGCATTAC +
Preference number: 5 (lower is better)
Translates to: LGLRKWAAGCSCRQSNWHTTKDA*EQPAHY
Trigger: GTAATGCGCTGGCTGCTCCAAAGCATCTTTTGTTGT...GTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGCTGGTGGAAAGGCCGAAAAGTCTTTCTCTTTCCCGTaGATGTGCTCTTGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: AQASRLREVLLAGGKAEKSFSFP*MCSCKG
Trigger: TCCTTTGCAAGAGCACATCAACGGGAAAGAGAAAGA...CTTTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp TCCGAGTGCCAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGAAAATGTGGGATGTATaGTATTCCACAAATGGCCGG +
Preference number: 5 (lower is better)
Translates to: SECQPLRPRPADFVRCCWKMWDV*YSTNGR
Trigger: CCGGCCATTTGTGGAATACAATACATCCCACATTTT...CCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CTTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACAGAGAGAAGGAACGCTaGAGCTTATTGCTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LGLRKWAAGCSCRQSNWHREKER*SLLLSS
Trigger: GGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCT...GTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp ACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGGTCTCCGCAAGTGGGCAGAACTGGCATAGCTTGTaGGTCCCATCCAGAGTAGTG +
Preference number: 5 (lower is better)
Translates to: TWLLPPAHRIDLVSASGQNWHSL*VPSRVV
Trigger: CACTACTCTGGATGGGACCAACAAGCTATGCCAGTT...CTGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GAGACAGCAGGGACAGGTTCATTTGGCTTCTCCAGGTGCAGCAGCTTGAGTTTGGCGCACAGAATAGACTaGGTCTCCGCAAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: ETAGTGSFGFSRCSSLSLAHRID*VSASGQ
Trigger: CTGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGC...CAAACTCAAGCTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTGCTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCAGCTTTGGCTGAGAATTaGAAGGTGCTGCTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: APSTVSNWPELQALPRSAALAEN*KVLLLC
Trigger: GCAGAGCAGCAGCACCTTCAAATTCTCAGCCAAAGC...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCAACTGAGGACGCCCCTTaGCTCTCGCTCCATTTTGAT +
Preference number: 5 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRATEDAP*LSLHFD
Trigger: ATCAAAATGGAGCGAGAGCAAAGGGGCGTCCTCAGT...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp TGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCAAAATAGAGGGAAACGAAAGTaGTCACGGCGTCTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: CLRRWLRQSRSVRTLWQNRGKRK*SRRLPS
Trigger: CGAGGGGAGACGCCGTGACAACTTTCGTTTCCCTCT...ATTTTGCCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACTCTTTCTCTTTCCCGTaGATGTGCTCTTGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHSFSFP*MCSCKG
Trigger: TCCTTTGCAAGAGCACATCAACGGGAAAGAGAAAGA...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp TCCGAGTGCCAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGCCTCTCAGTAACAATTaGAGTTCCAATCATCTCATG +
Preference number: 5 (lower is better)
Translates to: SECQPLRPRPADFVRCCWPLSNN*SSNHLM
Trigger: CATGAGATGATTGGAACTCAAATTGTTACTGAGAGG...CCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp TCCGAGTGCCAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGCTTCGCTTCATAAGCTaGGAGCAGTTGATATTAATG +
Preference number: 5 (lower is better)
Translates to: SECQPLRPRPADFVRCCWLRFIS*EQLILM
Trigger: CATTAATATCAACTGCTCCAAGCTTATGAAGCGAAG...CCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCAGAACGCTTGAGCTTATaGCTGTCTTCCAGCCTGTCT +
Preference number: 5 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRAERLSL*LSSSLS
Trigger: AGACAGGCTGGAAGACAGCAATAAGCTCAAGCGTTC...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCAGAACGCTTGAGCTTATaGCTGTCTTCCAGCCTGTCT +
Preference number: 5 (lower is better)
Translates to: APSTVSNWPELQALPRSAERLSL*LSSSLS
Trigger: AGACAGGCTGGAAGACAGCAATAAGCTCAAGCGTTC...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCAGGGTTGATCCACCTGTaGCTTTTACACCATAGCTCC +
Preference number: 5 (lower is better)
Translates to: APSTVSNWPELQALPRSAGLIHL*LLHHSS
Trigger: GGAGCTATGGTGTAAAAGCAACAGGTGGATCAACCC...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp TCCGAGTGCCAGCCCTTAAGGCCCAGGCCAGCAGACTTCGTGAGGTGCTGCTGGATAGGATCATTTCTCTaGGATTTACCACTAGGCTCT +
Preference number: 5 (lower is better)
Translates to: SECQPLRPRPADFVRCCWIGSFL*DLPLGS
Trigger: AGAGCCTAGTGGTAAATCCAAGAGAAATGATCCTAT...CCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACAGCAGCCCCTCACATTaGATTCATAAAGAGATGACT +
Preference number: 5 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHSSPSH*IHKEMT
Trigger: AGTCATCTCTTTATGAATCAAATGTGAGGGGCTGCT...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp TGCAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTGGGGAGCAGCCCCTCACATTaGATTCATAAAGAGATGACT +
Preference number: 5 (lower is better)
Translates to: CNRLLWLSEGLAVCSFLGSSPSH*IHKEMT
Trigger: AGTCATCTCTTTATGAATCAAATGTGAGGGGCTGCT...CCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp TGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGCAAAATCCCGTTGATGTGCTCTaGCAAAGGACTCCGTCCACA +
Preference number: 5 (lower is better)
Translates to: CLRRWLRQSRSVRTLWQNPVDVL*QRTPST
Trigger: TGTGGACGGAGTCCTTTGCAAGAGCACATCAACGGG...ATTTTGCCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CTTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACACTAGAACACATCCATaGGAGGCTTTTGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: LGLRKWAAGCSCRQSNWHTRTHP*EAFAFS
Trigger: TGAGAAAGCAAAAGCCTCCAATGGATGTGTTCTAGT...GTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGTCCAGGTGCAGCAGCTaGAGTTTGCTCTTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVSRCSS*SLLFGP
Trigger: AGGGCCAAAGAGCAAACTCAAGCTGCTGCACCTGGA...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTGCGCACAGAATAGACTaGGTCTCCGCAAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFAHRID*VSASGQ
Trigger: CTGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGC...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp ACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGGTCTCCGCAAGTGGGCAGAGGCCCACGGGAATTTaGTGCATAGACAGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: TWLLPPAHRIDLVSASGQRPTGI*CIDSLN
Trigger: ATTCAAACTGTCTATGCACAAAATTCCCGTGGGCCT...CTGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGTGCTGCATCAGCTCCTaGTTGAGGACATCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVCCISS*LRTSRW
Trigger: CCAGCGAGATGTCCTCAACAAGGAGCTGATGCAGCA...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp TGCAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTGGGGCTTCGCTTCATAAGCTaGGAGCAGTTGATATTAATG +
Preference number: 5 (lower is better)
Translates to: CNRLLWLSEGLAVCSFLGLRFIS*EQLILM
Trigger: CATTAATATCAACTGCTCCAAGCTTATGAAGCGAAG...CCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp TTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACTTCTGTAATTAACACTTaGTCCTGTTGCAACCTTCGC +
Preference number: 5 (lower is better)
Translates to: LVSASGQLAAAVGRVTGTSVINT*SCCNLR
Trigger: GCGAAGGTTGCAACAGGACAAAGTGTTAATTACAGA...AGTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp TGCAATCGCTTGCTCTGGCTGTCTGAAGGCCTGGCGGTCTGCAGCTTCTTGGGGAACATCTTGGGAGCTTaGATCGTAAACTACAACCTT +
Preference number: 5 (lower is better)
Translates to: CNRLLWLSEGLAVCSFLGNILGA*IVNYNL
Trigger: AAGGTTGTAGTTTACGATCAAAGCTCCCAAGATGTT...CCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCAGGGACAGGTTCATTaGGCTTCTCCAGGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFQGQVH*ASPGAA
Trigger: TGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTG...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CCACGCTCCCACTTCGATGCAGTGGAGATAAAAGGGACCTCTGGGCGGTGCCACATAGGATCATTTCTCTaGGATTTACCACTAGGCTCT +
Preference number: 5 (lower is better)
Translates to: PRSHFDAVEIKGTSGRCHIGSFL*DLPLGS
Trigger: AGAGCCTAGTGGTAAATCCAAGAGAAATGATCCTAT...GTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CTTGGTCTCCGCAAGTGGGCAGCTGGCTGCAGCTGTAGGCAGAGTAACTGGCACATAAGCTTGGAGCAGTaGATATTAATGGCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: LGLRKWAAGCSCRQSNWHISLEQ*ILMASK
Trigger: TTTGGAAGCCATTAATATCAACTGCTCCAAGCTTAT...GTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGTGCAGCAGCTTGAGTTaGCTCTTTGGCCCTGATGCT +
Preference number: 5 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSECSSLS*LFGPDA
Trigger: AGCATCAGGGCCAAAGAGCAAACTCAAGCTGCTGCA...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGAGTCAGCTCTGTCACTaGGCTTCTGCCGCCTGCGCA +
Preference number: 5 (lower is better)
Translates to: SEAERAKTSALAENLKVLSQLCH*ASAACA
Trigger: TGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACT...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCAGCAAAAACATCTGCTTaGGCTGAGAATTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: APSTVSNWPELQALPRSAAKTSA*AENLKV
Trigger: CACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGC...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS TCA 90 bp GGAAGAATTCGGGTTGGCCCAATGTTGGCAACAGGTAAGCAAGGCTaGGAAATGCAGGTAGGGACTAGAGTGGATTTTCCTTCACAGAGG +
Preference number: 5 (lower is better)
Translates to: GRIRVGPMLATGKQG*EMQVGTRVDFPSQR
Trigger: CCTCTGTGAAGGAAAATCCACTCTAGTCCCTACCTGCATTTCTCAGCCTTGCTTACCTGTTGCCAACATTGGGCCAACCCGAATTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298573.9
ENST00000545864.1
ENST00000626413.3
ENST00000630190.1
CDS-3UTR CAA 90 bp CCGCGAGTCAGCTCTGTCACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGATAAGCTTGGAGCAGTaGATATTAATGGCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: PRVSSVTWLLPPAHRIDLISLEQ*ILMASK
Trigger: TTTGGAAGCCATTAATATCAACTGCTCCAAGCTTAT...CAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp ACTTGGCTTCTGCCGCCTGCGCACAGAATAGACTTGGTCTCCGCAAGTGGGCAGATGAAATCTACTGATTaGTCCAACCACGGCAAAATT +
Preference number: 5 (lower is better)
Translates to: TWLLPPAHRIDLVSASGQMKSTD*SNHGKI
Trigger: AATTTTGCCGTGGTTGGACAAATCAGTAGATTTCAT...CTGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGGAGAACTGGCATAGCTaGTTGGTCCCATCCAGAGTA +
Preference number: 5 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEENWHS*LVPSRV
Trigger: TACTCTGGATGGGACCAACAAGCTATGCCAGTTCTC...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTGAGAACTGGCATAGCTaGTTGGTCCCATCCAGAGTA +
Preference number: 5 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFENWHS*LVPSRV
Trigger: TACTCTGGATGGGACCAACAAGCTATGCCAGTTCTC...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTACCGAATGCAATCGCTaGCTCTGGCTGTCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: QVSFFSGDLNDFHAARKATECNR*LWLSEG
Trigger: GCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGGT...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGGCGCACAGAATAGACTaGGTCTCCGCAAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQAHRID*VSASGQ
Trigger: CTGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGC...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGGGGTTGATCCACCTGTaGCTTTTACACCATAGCTCC +
Preference number: 5 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEGLIHL*LLHHSS
Trigger: GGAGCTATGGTGTAAAAGCAACAGGTGGATCAACCC...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp TGGCACTGCCTCCGTAGATGGCTGAGGCAGAGTAGAAGTGTGAGGACTCTGTGGGCCCTTCCATTTTTGTaGAGAGAAGTATTAGCTGAT +
Preference number: 5 (lower is better)
Translates to: WHCLRRWLRQSRSVRTLWALPFL*REVLAD
Trigger: ATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC...CCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp AACCAGTCCTCCAACAATAGCCTGCTGAGGCTGGTCATGAAGGGGCTCCGAGCAGCCCTTCCATTTTTGTaGAGAGAAGTATTAGCTGAT +
Preference number: 5 (lower is better)
Translates to: NQSSNNSLLRLVMKGLRAALPFL*REVLAD
Trigger: ATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC...TGCTCGGAGCCCCTTCATGACCAGCCTCAGCAGGCTATTGTTGGAGGACTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GCTCCGAGCACTGTCAGCAACTGGCCTGAACTTCAGGCTCTCCCAAGATCTGCATCTGCCCTTCCATTTTaGTTGAGAGAAGTATTAGCT +
Preference number: 5 (lower is better)
Translates to: APSTVSNWPELQALPRSASALPF*LREVLA
Trigger: AGCTAATACTTCTCTCAACAAAAATGGAAGGGCAGA...TGCAGATCTTGGGAGAGCCTGAAGTTCAGGCCAGTTGCTGACAGTGCTCGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGACAACAAAAGATGCTTaGGAGCAGCCAGCGCATTAC +
Preference number: 5 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSETTKDA*EQPAHY
Trigger: GTAATGCGCTGGCTGCTCCAAAGCATCTTTTGTTGT...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp ACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGTCCCCGTTGATGTGCTCTaGCAAAGGACTCCGTCCACA +
Preference number: 5 (lower is better)
Translates to: TAWPWLCTLFTTDQNSMVPVDVL*QRTPST
Trigger: TGTGGACGGAGTCCTTTGCAAGAGCACATCAACGGG...GACCATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGGAGAGAGGCAACATCTaGGGAGCTTTGATCGTAAAC +
Preference number: 5 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEERGNI*GALIVN
Trigger: GTTTACGATCAAAGCTCCCAAGATGTTGCCTCTCTC...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGAGAGAGAAGGAACGCTaGAGCTTATTGCTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEREKER*SLLLSS
Trigger: GGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCT...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GAGACAGCAGGGACAGGTTCATTTGGCTTCTCCAGGTGCAGCAGCTTGAGTTTGAGAGTAACAACTGGGTaGATCCACCTGTTGCTTTTA +
Preference number: 5 (lower is better)
Translates to: ETAGTGSFGFSRCSSLSLRVTTG*IHLLLL
Trigger: TAAAAGCAACAGGTGGATCAACCCAGTTGTTACTCT...CAAACTCAAGCTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTGCTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CACCCCTTCGCCACGGCAGTCTCGATTCCAAGAACTGATTATCTGACACTAGTGAAGAGATGGCGTCACTaGAAACCAATCCCAGTGAAT +
Preference number: 5 (lower is better)
Translates to: HPFATAVSIPRTDYLTLVKRWRH*KPIPVN
Trigger: ATTCACTGGGATTGGTTTCAAGTGACGCCATCTCTT...CACTAGTGTCAGATAATCAGTTCTTGGAATCGAGACTGCCGTGGCGAAGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCACGGGTTGGCCCAATGTaGGCAACAGGTAAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPRVGPM*ATGKQG
Trigger: GCCTTGCTTACCTGTTGCCAACATTGGGCCAACCCG...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTCGGGTTGGCCCAATGTaGGCAACAGGTAAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSRVGPM*ATGKQG
Trigger: GCCTTGCTTACCTGTTGCCAACATTGGGCCAACCCG...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS GCA 90 bp AAAGATGCTTTGGAGCAGCCAGCGCATTACATCATTCTTTACCTTTaGTCCCGCGCTCCAACAGCTTTACACTGGACTGAAAGCTTTTGG +
Preference number: 5 (lower is better)
Translates to: KDALEQPAHYIILYL*SRAPTALHWTESFW
Trigger: CCAAAAGCTTTCAGTCCAGTGTAAAGCTGTTGGAGCGCGGGAGCAAAGGTAAAGAATGATGTAATGCGCTGGCTGCTCCAAAGCATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS GCA 90 bp AAAGATGCTTTGGAGCAGCCAGCGCATTACATCATTCTTTACCTTTaGTCCCGCGCTCCAACAGCTTTACACTGGACTGAAAGCCCATTA +
Preference number: 5 (lower is better)
Translates to: KDALEQPAHYIILYL*SRAPTALHWTESPL
Trigger: TAATGGGCTTTCAGTCCAGTGTAAAGCTGTTGGAGCGCGGGAGCAAAGGTAAAGAATGATGTAATGCGCTGGCTGCTCCAAAGCATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541207.1
ENST00000629698.1
CDS GCA 90 bp AAAGATGCTTTGGAGCAGCCAGCGCATTACATCATTCTTTACCTTTaGTCCCGCGCTCCAACAGCTTTACACTGGACTGAAAGCCTTAAC +
Preference number: 5 (lower is better)
Translates to: KDALEQPAHYIILYL*SRAPTALHWTESLN
Trigger: GTTAAGGCTTTCAGTCCAGTGTAAAGCTGTTGGAGCGCGGGAGCAAAGGTAAAGAATGATGTAATGCGCTGGCTGCTCCAAAGCATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536236.1
ENST00000627160.1
CDS-3UTR CAA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTAGAGGGAAACGAAAGTaGTCACGGCGTCTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: PPETSLARSYCFPFLNMFRGKRK*SRRLPS
Trigger: CGAGGGGAGACGCCGTGACAACTTTCGTTTCCCTCT...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp AAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTTGATATCCAGAGAGAAGCCCGTTGATGTGCTCTaGCAAAGGACTCCGTCCACA +
Preference number: 5 (lower is better)
Translates to: KDAAMLAEYETDLISREKPVDVL*QRTPST
Trigger: TGTGGACGGAGTCCTTTGCAAGAGCACATCAACGGG...CTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCAACCGAATGCAATCGCTaGCTCTGGCTGTCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPTECNR*LWLSEG
Trigger: GCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGGT...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTAGTCAGCTCTGTCACTaGGCTTCTGCCGCCTGCGCA +
Preference number: 5 (lower is better)
Translates to: ALPFLLREVLADLSNADVSQLCH*ASAACA
Trigger: TGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACT...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GATATCCAGAGAGAAGGAACGCTTGAGCTTATTGCTGTCTTCCAGCCTGTCTGCAGGCCCACGGGAATTTaGTGCATAGACAGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: DIQREGTLELIAVFQPVCRPTGI*CIDSLN
Trigger: ATTCAAACTGTCTATGCACAAAATTCCCGTGGGCCT...GCAGACAGGCTGGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCTGGATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTTACAGTGATTGTAGGTaGAGGACTGAGGACGCCCCT +
Preference number: 5 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGYSDCR*RTEDAP
Trigger: AGGGGCGTCCTCAGTCCTCAACCTACAATCACTGTA...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS GCA 90 bp GCCATGACAACAATAAGTCCTCTTTTCCCACCTCCTTCTTTAATTTaGCACGATGATGTAATGGTGGTGTGCTCAAAGGCTCAGCCACTC +
Preference number: 5 (lower is better)
Translates to: AMTTISPLFPPPSLI*HDDVMVVCSKAQPL
Trigger: GAGTGGCTGAGCCTTTGAGCACACCACCATTACATCATCGTGGCAAATTAAAGAAGGAGGTGGGAAAAGAGGACTTATTGTTGTCATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000539940.1
ENST00000541207.1
ENST00000626413.3
ENST00000626461.1
ENST00000628303.1
ENST00000629698.1
CDS-3UTR CAA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTACTAGAACACATCCATaGGAGGCTTTTGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFTRTHP*EAFAFS
Trigger: TGAGAAAGCAAAAGCCTCCAATGGATGTGTTCTAGT...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp AAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTTGATATCCAGAGAGAAGTGCAGCAGCTTGAGTTaGCTCTTTGGCCCTGATGCT +
Preference number: 5 (lower is better)
Translates to: KDAAMLAEYETDLISREKCSSLS*LFGPDA
Trigger: AGCATCAGGGCCAAAGAGCAAACTCAAGCTGCTGCA...CTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGGAGAACTGGCATAGCTaGTTGGTCCCATCCAGAGTA +
Preference number: 5 (lower is better)
Translates to: SEAERAKTSALAENLKVLENWHS*LVPSRV
Trigger: TACTCTGGATGGGACCAACAAGCTATGCCAGTTCTC...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTGCGCACAGAATAGACTaGGTCTCCGCAAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: ALPFLLREVLADLSNADVAHRID*VSASGQ
Trigger: CTGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGC...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTCCAAATTCCATTaGGCAGCTTCTGCGTTTAAA +
Preference number: 5 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFLSKFH*AASAFK
Trigger: TTTAAACGCAGAAGCTGCCAAATGGAATTTGGAGAG...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS CCA 90 bp GAAACTTCAAGCGCGGATGAGGTCATTGGTTTAAAAATAAAGAGATaGCGTCACTTGAAACCAATCCCAGTGAATGAACTCAGCGGAGCC +
Preference number: 5 (lower is better)
Translates to: ETSSADEVIGLKIKR*RHLKPIPVNELSGA
Trigger: GGCTCCGCTGAGTTCATTCACTGGGATTGGTTTCAAGTGACGCCATCTCTTTATTTTTAAACCAATGACCTCATCCGCGCTTGAAGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTACAACAAAAGATGCTTaGGAGCAGCCAGCGCATTAC +
Preference number: 5 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGTTKDA*EQPAHY
Trigger: GTAATGCGCTGGCTGCTCCAAAGCATCTTTTGTTGT...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGCCTCTCAGTAACAATTaGAGTTCCAATCATCTCATG +
Preference number: 5 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEPLSNN*SSNHLM
Trigger: CATGAGATGATTGGAACTCAAATTGTTACTGAGAGG...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCCTCTCAGTAACAATTaGAGTTCCAATCATCTCATG +
Preference number: 5 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFPLSNN*SSNHLM
Trigger: CATGAGATGATTGGAACTCAAATTGTTACTGAGAGG...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTAACATCTTGGGAGCTTaGATCGTAAACTACAACCTT +
Preference number: 5 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFNILGA*IVNYNL
Trigger: AAGGTTGTAGTTTACGATCAAAGCTCCCAAGATGTT...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGAACATCTTGGGAGCTTaGATCGTAAACTACAACCTT +
Preference number: 5 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSENILGA*IVNYNL
Trigger: AAGGTTGTAGTTTACGATCAAAGCTCCCAAGATGTT...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTCAGGGACAGGTTCATTaGGCTTCTCCAGGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: ALPFLLREVLADLSNADVQGQVH*ASPGAA
Trigger: TGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTG...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGAGAGAGAAGGAACGCTaGAGCTTATTGCTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQREKER*SLLLSS
Trigger: GGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCT...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCAAACTGGCATAGCTTGTaGGTCCCATCCAGAGTAGTG +
Preference number: 5 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPNWHSL*VPSRVV
Trigger: CACTACTCTGGATGGGACCAACAAGCTATGCCAGTT...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp AAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTTGATATCCAGAGAGAAGGGGTTGATCCACCTGTaGCTTTTACACCATAGCTCC +
Preference number: 5 (lower is better)
Translates to: KDAAMLAEYETDLISREKGLIHL*LLHHSS
Trigger: GGAGCTATGGTGTAAAAGCAACAGGTGGATCAACCC...CTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGGGGTTGATCCACCTGTaGCTTTTACACCATAGCTCC +
Preference number: 5 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWGLIHL*LLHHSS
Trigger: GGAGCTATGGTGTAAAAGCAACAGGTGGATCAACCC...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTTGCTGCATCAGCTCCTaGTTGAGGACATCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: ALPFLLREVLADLSNADVCCISS*LRTSRW
Trigger: CCAGCGAGATGTCCTCAACAAGGAGCTGATGCAGCA...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGGTTTCCAAAAACAGCTaGGCCATGGCTTTGCACTCT +
Preference number: 5 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQVSKNS*AMALHS
Trigger: AGAGTGCAAAGCCATGGCCAAGCTGTTTTTGGAAAC...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTACAGTGATTGTAGGTaGAGGACTGAGGACGCCCCT +
Preference number: 5 (lower is better)
Translates to: PPETSLARSYCFPFLNMFYSDCR*RTEDAP
Trigger: AGGGGCGTCCTCAGTCCTCAACCTACAATCACTGTA...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS TCA 90 bp GAAGCTCTTCTCCAGTTTACCCAGAAGTACAGTGAGAAAACAGTCTaGAGAGAGAGAGGCAACATCTTGGGAGCTTTGATCGTAAACTAC +
Preference number: 5 (lower is better)
Translates to: EALLQFTQKYSEKTV*RERGNILGALIVNY
Trigger: GTAGTTTACGATCAAAGCTCCCAAGATGTTGCCTCTCTCTCTTCAGACTGTTTTCTCACTGTACTTCTGGGTAAACTGGAGAAGAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS CCA 90 bp CATAAAGAGATGACTGGAATAACCATTCCACAACAAAAGATGCTTTaGAGCAGCCAGCGCATTACATCATTCTTTACCTTTGCTCCCGCG +
Preference number: 5 (lower is better)
Translates to: HKEMTGITIPQQKML*SSQRITSFFTFAPA
Trigger: CGCGGGAGCAAAGGTAAAGAATGATGTAATGCGCTGGCTGCTCCAAAGCATCTTTTGTTGTGGAATGGTTATTCCAGTCATCTCTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000536236.1
ENST00000539940.1
ENST00000541207.1
ENST00000626413.3
ENST00000626461.1
ENST00000627160.1
ENST00000628303.1
ENST00000629698.1
CDS-3UTR CAA 90 bp CCTCGGCTGTCAGGTGAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTATAAGCTTGGAGCAGTaGATATTAATGGCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: PRLSGERGFVNQLWIGSFISLEQ*ILMASK
Trigger: TTTGGAAGCCATTAATATCAACTGCTCCAAGCTTAT...AAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GAAAATGGGCTACCAGATATGGTAGTGGTCAAAGCCCCGACTTTCCTGTCTGAGATGAAATCTACTGATTaGTCCAACCACGGCAAAATT +
Preference number: 5 (lower is better)
Translates to: ENGLPDMVVVKAPTFLSEMKSTD*SNHGKI
Trigger: AATTTTGCCGTGGTTGGACAAATCAGTAGATTTCAT...CTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CTTCTTCTCATAGTCCAGGAGTTGGCCCAGAAAATTGAAGTTTGGAGATATAGTGAACGCTTGAGCTTATaGCTGTCTTCCAGCCTGTCT +
Preference number: 5 (lower is better)
Translates to: LLLIVQELAQKIEVWRYSERLSL*LSSSLS
Trigger: AGACAGGCTGGAAGACAGCAATAAGCTCAAGCGTTC...ACTATATCTCCAAACTTCAATTTTCTGGGCCAACTCCTGGACTATGAGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCAGTTTCCAAAAACAGCTaGGCCATGGCTTTGCACTCT +
Preference number: 5 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPVSKNS*AMALHS
Trigger: AGAGTGCAAAGCCATGGCCAAGCTGTTTTTGGAAAC...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTACTGAGGACGCCCCTTaGCTCTCGCTCCATTTTGAT +
Preference number: 5 (lower is better)
Translates to: ALPFLLREVLADLSNADVTEDAP*LSLHFD
Trigger: ATCAAAATGGAGCGAGAGCAAAGGGGCGTCCTCAGT...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTACAGCTCTTCAACAATaGCCCTTCCTGTTTTTCCTG +
Preference number: 5 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGTALQQ*PFLFFL
Trigger: CAGGAAAAACAGGAAGGGCAATTGTTGAAGAGCTGT...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp CTTCTTCTCATAGTCCAGGAGTTGGCCCAGAAAATTGAAGTTTGGAGATATAGTACAACAAAAGATGCTTaGGAGCAGCCAGCGCATTAC +
Preference number: 5 (lower is better)
Translates to: LLLIVQELAQKIEVWRYSTTKDA*EQPAHY
Trigger: GTAATGCGCTGGCTGCTCCAAAGCATCTTTTGTTGT...ACTATATCTCCAAACTTCAATTTTCTGGGCCAACTCCTGGACTATGAGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCATCTTTCTCTTTCCCGTaGATGTGCTCTTGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPSFSFP*MCSCKG
Trigger: TCCTTTGCAAGAGCACATCAACGGGAAAGAGAAAGA...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp CAAGTGTCTTTCTTCTCAGGAGACCTCAATGATTTCCATGCTGCCCGAAAAGCTCCTCTCAGTAACAATTaGAGTTCCAATCATCTCATG +
Preference number: 5 (lower is better)
Translates to: QVSFFSGDLNDFHAARKAPLSNN*SSNHLM
Trigger: CATGAGATGATTGGAACTCAAATTGTTACTGAGAGG...AGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTAAAATGTGGGATGTATaGTATTCCACAAATGGCCGG +
Preference number: 5 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGKMWDV*YSTNGR
Trigger: CCGGCCATTTGTGGAATACAATACATCCCACATTTT...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp ACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGGTCTCTGTAATTAACACTTaGTCCTGTTGCAACCTTCGC +
Preference number: 5 (lower is better)
Translates to: TAWPWLCTLFTTDQNSMVSVINT*SCCNLR
Trigger: GCGAAGGTTGCAACAGGACAAAGTGTTAATTACAGA...GACCATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp CTTCTTCTCATAGTCCAGGAGTTGGCCCAGAAAATTGAAGTTTGGAGATATAGTGAGAGAGGCAACATCTaGGGAGCTTTGATCGTAAAC +
Preference number: 5 (lower is better)
Translates to: LLLIVQELAQKIEVWRYSERGNI*GALIVN
Trigger: GTTTACGATCAAAGCTCCCAAGATGTTGCCTCTCTC...ACTATATCTCCAAACTTCAATTTTCTGGGCCAACTCCTGGACTATGAGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGACTAGAACACATCCATaGGAGGCTTTTGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: SEAERAKTSALAENLKVLTRTHP*EAFAFS
Trigger: TGAGAAAGCAAAAGCCTCCAATGGATGTGTTCTAGT...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp AAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTTGATATCCAGAGAGAAGCTCATAGTCCAGGAGTaGGCCCAGAAAATTGAAGTT +
Preference number: 5 (lower is better)
Translates to: KDAAMLAEYETDLISREKLIVQE*AQKIEV
Trigger: AACTTCAATTTTCTGGGCCAACTCCTGGACTATGAG...CTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTCTCATAGTCCAGGAGTaGGCCCAGAAAATTGAAGTT +
Preference number: 5 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSLIVQE*AQKIEV
Trigger: AACTTCAATTTTCTGGGCCAACTCCTGGACTATGAG...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCACTCATAGTCCAGGAGTaGGCCCAGAAAATTGAAGTT +
Preference number: 5 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPLIVQE*AQKIEV
Trigger: AACTTCAATTTTCTGGGCCAACTCCTGGACTATGAG...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GTAACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATAACTGGCATAGCTTGTaGGTCCCATCCAGAGTAGTG +
Preference number: 5 (lower is better)
Translates to: VTSTQPTSRSPVILSVVNNWHSL*VPSRVV
Trigger: CACTACTCTGGATGGGACCAACAAGCTATGCCAGTT...ATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGCTCTCCAAATTCCATTaGGCAGCTTCTGCGTTTAAA +
Preference number: 5 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQLSKFH*AASAFK
Trigger: TTTAAACGCAGAAGCTGCCAAATGGAATTTGGAGAG...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTCTCTCCAAATTCCATTaGGCAGCTTCTGCGTTTAAA +
Preference number: 5 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGLSKFH*AASAFK
Trigger: TTTAAACGCAGAAGCTGCCAAATGGAATTTGGAGAG...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp AAACTCAAGCCAGGAGGATGTTTGAAAGCCAATCTGCACTATCACTTGTTCCAGAGAGTAACAACTGGGTaGATCCACCTGTTGCTTTTA +
Preference number: 5 (lower is better)
Translates to: KLKPGGCLKANLHYHLFQRVTTG*IHLLLL
Trigger: TAAAAGCAACAGGTGGATCAACCCAGTTGTTACTCT...CTGGAACAAGTGATAGTGCAGATTGGCTTTCAAACATCCTCCTGGCTTGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGAAGAGATGGCGTCACTaGAAACCAATCCCAGTGAAT +
Preference number: 5 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWKRWRH*KPIPVN
Trigger: ATTCACTGGGATTGGTTTCAAGTGACGCCATCTCTT...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCACCAAGTCGGTCTGTGTaGAGTCATATCATTCTGTGC +
Preference number: 5 (lower is better)
Translates to: ETSLARSYCFPFLNMFWAPSRSV*SHIILC
Trigger: GCACAGAATGATATGACTCAACACAGACCGACTTGG...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GCTACCTACCTATTCACAATGCCTAGAAAATGGGCTACCAGATATGGTAGTGGTTTTCCTACCATGTACTaGTGTGTTCTGGAATCAGTC +
Preference number: 5 (lower is better)
Translates to: ATYLFTMPRKWATRYGSGFPTMY*CVLESV
Trigger: GACTGATTCCAGAACACACAAGTACATGGTAGGAAA...ACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCAAAAATGTGGGATGTATaGTATTCCACAAATGGCCGG +
Preference number: 5 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPKMWDV*YSTNGR
Trigger: CCGGCCATTTGTGGAATACAATACATCCCACATTTT...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTGAGAGAGGCAACATCTaGGGAGCTTTGATCGTAAAC +
Preference number: 5 (lower is better)
Translates to: ALPFLLREVLADLSNADVERGNI*GALIVN
Trigger: GTTTACGATCAAAGCTCCCAAGATGTTGCCTCTCTC...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp AAGGATGCTGCCATGCTGGCTGAATATGAAACTGATTTGATATCCAGAGAGAAGAGAGTAACAACTGGGTaGATCCACCTGTTGCTTTTA +
Preference number: 5 (lower is better)
Translates to: KDAAMLAEYETDLISREKRVTTG*IHLLLL
Trigger: TAAAAGCAACAGGTGGATCAACCCAGTTGTTACTCT...CTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228862.3
ENST00000628303.1
CDS-3UTR CAA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTAGAGTAACAACTGGGTaGATCCACCTGTTGCTTTTA +
Preference number: 5 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSRVTTG*IHLLLL
Trigger: TAAAAGCAACAGGTGGATCAACCCAGTTGTTACTCT...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp AGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGCTGAGAATTTGAAGGTGCTGATAGGATCATTTCTCTaGGATTTACCACTAGGCTCT +
Preference number: 5 (lower is better)
Translates to: SEAERAKTSALAENLKVLIGSFL*DLPLGS
Trigger: AGAGCCTAGTGGTAAATCCAAGAGAAATGATCCTAT...CAGCACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTAGGCCCACGGGAATTTaGTGCATAGACAGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: PPETSLARSYCFPFLNMFRPTGI*CIDSLN
Trigger: ATTCAAACTGTCTATGCACAAAATTCCCGTGGGCCT...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp AAAACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGACAGCTCTTCAACAATaGCCCTTCCTGTTTTTCCTG +
Preference number: 5 (lower is better)
Translates to: KTAWPWLCTLFTTDQNSMTALQQ*PFLFFL
Trigger: CAGGAAAAACAGGAAGGGCAATTGTTGAAGAGCTGT...CATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTAGCAGCCCCTCACATTaGATTCATAAAGAGATGACT +
Preference number: 5 (lower is better)
Translates to: PPETSLARSYCFPFLNMFSSPSH*IHKEMT
Trigger: AGTCATCTCTTTATGAATCAAATGTGAGGGGCTGCT...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCAAAAATGTGGGATGTATaGTATTCCACAAATGGCCGG +
Preference number: 5 (lower is better)
Translates to: ETSLARSYCFPFLNMFWAKMWDV*YSTNGR
Trigger: CCGGCCATTTGTGGAATACAATACATCCCACATTTT...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCACTTCGCTTCATAAGCTaGGAGCAGTTGATATTAATG +
Preference number: 5 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPLRFIS*EQLILM
Trigger: CATTAATATCAACTGCTCCAAGCTTATGAAGCGAAG...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCATCTGTAATTAACACTTaGTCCTGTTGCAACCTTCGC +
Preference number: 5 (lower is better)
Translates to: ETSLARSYCFPFLNMFWASVINT*SCCNLR
Trigger: GCGAAGGTTGCAACAGGACAAAGTGTTAATTACAGA...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTCTCATAGTCCAGGAGTaGGCCCAGAAAATTGAAGTT +
Preference number: 5 (lower is better)
Translates to: ALPFLLREVLADLSNADVLIVQE*AQKIEV
Trigger: AACTTCAATTTTCTGGGCCAACTCCTGGACTATGAG...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCACTCTCCAAATTCCATTaGGCAGCTTCTGCGTTTAAA +
Preference number: 5 (lower is better)
Translates to: ETSLARSYCFPFLNMFWALSKFH*AASAFK
Trigger: TTTAAACGCAGAAGCTGCCAAATGGAATTTGGAGAG...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp ACTGAAACAACTGTTCCTCCTGTTACCCTCTATCTCTGGAGGCTGATTTATTCTGCCCTTCCATTTTTGTaGAGAGAAGTATTAGCTGAT +
Preference number: 5 (lower is better)
Translates to: TETTVPPVTLYLWRLIYSALPFL*REVLAD
Trigger: ATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC...AGAATAAATCAGCCTCCAGAGATAGAGGGTAACAGGAGGAACAGTTGTTTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCAGCCCTTCCATTTTTGTaGAGAGAAGTATTAGCTGAT +
Preference number: 5 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPALPFL*REVLAD
Trigger: ATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp TTTACCAACTGTATCCATGCAGTGAAGCAGAAAGGGCAAAAACATCTGCTTTGGTCTGCCCTTCCATTTTaGTTGAGAGAAGTATTAGCT +
Preference number: 5 (lower is better)
Translates to: FTNCIHAVKQKGQKHLLWSALPF*LREVLA
Trigger: AGCTAATACTTCTCTCAACAAAAATGGAAGGGCAGA...CCAAAGCAGATGTTTTTGCCCTTTCTGCTTCACTGCATGGATACAGTTGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTCCAAGTCGGTCTGTGTaGAGTCATATCATTCTGTGC +
Preference number: 5 (lower is better)
Translates to: TSTQPTSRSPVILSVVNIPSRSV*SHIILC
Trigger: GCACAGAATGATATGACTCAACACAGACCGACTTGG...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS TCA 90 bp CATTCTTTACCTTTGCTCCCGCGCTCCAACAGCTTTACACTGGACTaGAAGCCCATTACTCAGCTTCAACAATTTTCAAAAATTTATCAA +
Preference number: 5 (lower is better)
Translates to: HSLPLLPRSNSFTLD*KPITQLQQFSKIYQ
Trigger: TTGATAAATTTTTGAAAATTGTTGAAGCTGAGTAATGGGCTTTCAGTCCAGTGTAAAGCTGTTGGAGCGCGGGAGCAAAGGTAAAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541207.1
ENST00000629698.1
CDS CCA 90 bp TACATCATTCTTTACCTTTGCTCCCGCGCTCCAACAGCTTTACACTaGACTGAAAGCCCATTACTCAGCTTCAACAATTTTCAAAAATTT +
Preference number: 5 (lower is better)
Translates to: YIILYLCSRAPTALH*TESPLLSFNNFQKF
Trigger: AAATTTTTGAAAATTGTTGAAGCTGAGTAATGGGCTTTCAGTCCAGTGTAAAGCTGTTGGAGCGCGGGAGCAAAGGTAAAGAATGATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541207.1
ENST00000629698.1
CDS-3UTR CAA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTAGCAGCCCCTCACATTaGATTCATAAAGAGATGACT +
Preference number: 5 (lower is better)
Translates to: ALPFLLREVLADLSNADVSSPSH*IHKEMT
Trigger: AGTCATCTCTTTATGAATCAAATGTGAGGGGCTGCT...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTTGGGCAAACATCTTGGGAGCTTaGATCGTAAACTACAACCTT +
Preference number: 5 (lower is better)
Translates to: ETSLARSYCFPFLNMFWANILGA*IVNYNL
Trigger: AAGGTTGTAGTTTACGATCAAAGCTCCCAAGATGTT...TGCCCAAAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp AAAACAGCTTGGCCATGGCTTTGCACTCTATTCACAACTGATCAAAACTCAATGATAGGATCATTTCTCTaGGATTTACCACTAGGCTCT +
Preference number: 5 (lower is better)
Translates to: KTAWPWLCTLFTTDQNSMIGSFL*DLPLGS
Trigger: AGAGCCTAGTGGTAAATCCAAGAGAAATGATCCTAT...CATTGAGTTTTGATCAGTTGTGAATAGAGTGCAAAGCCATGGCCAAGCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GAGCGTGGGTTTGTGAATCAGCTTTGGATAGGATCATTTCTCTTGGATTTACCAGTTTGTGAATCAGCTTaGGATAGGATCATTTCTCTT +
Preference number: 5 (lower is better)
Translates to: ERGFVNQLWIGSFLLDLPVCESA*DRIISL
Trigger: AAGAGAAATGATCCTATCCAAAGCTGATTCACAAAC...TGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTAGGCCCACGGGAATTTaGTGCATAGACAGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: TSTQPTSRSPVILSVVNIRPTGI*CIDSLN
Trigger: ATTCAAACTGTCTATGCACAAAATTCCCGTGGGCCT...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTATCATAGCACATTATTaGTGCACAACTAGTGAGGTC +
Preference number: 5 (lower is better)
Translates to: PPETSLARSYCFPFLNMFIIAHY*CTTSEV
Trigger: GACCTCACTAGTTGTGCACAAATAATGTGCTATGAT...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTTTTCCTACCATGTACTaGTGTGTTCTGGAATCAGTC +
Preference number: 5 (lower is better)
Translates to: ALPFLLREVLADLSNADVFPTMY*CVLESV
Trigger: GACTGATTCCAGAACACACAAGTACATGGTAGGAAA...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp CCTCCTGAAACATCGTTAGCAAGGAGCTACTGCTTTCCTTTCTTAAACATGTTTATAAGCTTGGAGCAGTaGATATTAATGGCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: PPETSLARSYCFPFLNMFISLEQ*ILMASK
Trigger: TTTGGAAGCCATTAATATCAACTGCTCCAAGCTTAT...AAACATGTTTAAGAAAGGAAAGCAGTAGCTCCTTGCTAACGATGTTTCAGGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTTCTGCCCTTCCATTTTaGTTGAGAGAAGTATTAGCT +
Preference number: 5 (lower is better)
Translates to: ALPFLLREVLADLSNADVSALPF*LREVLA
Trigger: AGCTAATACTTCTCTCAACAAAAATGGAAGGGCAGA...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp ACTTCAACTCAACCAACTTCAAGGTCACCTGTGATTCTTTCTGTAGTCAATATTGCAAAAACATCTGCTTaGGCTGAGAATTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: TSTQPTSRSPVILSVVNIAKTSA*AENLKV
Trigger: CACCTTCAAATTCTCAGCCAAAGCAGATGTTTTTGC...AATATTGACTACAGAAAGAATCACAGGTGACCTTGAAGTTGGTTGAGTTGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS-3UTR CAA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTATGAAATCTACTGATTaGTCCAACCACGGCAAAATT +
Preference number: 5 (lower is better)
Translates to: ALPFLLREVLADLSNADVMKSTD*SNHGKI
Trigger: AATTTTGCCGTGGTTGGACAAATCAGTAGATTTCAT...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS-3UTR CAA 90 bp GCCCTTCCATTTTTGTTGAGAGAAGTATTAGCTGATCTCTCAAATGCAGATGTTGTTTGTGAATCAGCTTaGGATAGGATCATTTCTCTT +
Preference number: 5 (lower is better)
Translates to: ALPFLLREVLADLSNADVVCESA*DRIISL
Trigger: AAGAGAAATGATCCTATCCAAAGCTGATTCACAAAC...AACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS CAA 90 bp GGACATCTCGCTGGCAGCCAAGATAAAGATTGGGAAGAATTCGGGTaGGCCCAATGTTGGCAACAGGTAAGCAAGGCTGAGAAATGCAGG +
Preference number: 6 (lower is better)
Translates to: GHLAGSQDKDWEEFG*AQCWQQVSKAEKCR
Trigger: CCTGCATTTCTCAGCCTTGCTTACCTGTTGCCAACATTGGGCCAACCCGAATTCTTCCCAATCTTTATCTTGGCTGCCAGCGAGATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298573.9
ENST00000545864.1
ENST00000626413.3
ENST00000630190.1
CDS TCA 72 bp CGGGTTGGCCCAATGTTGGCAACAGGTAAGCAAGGCTaGGAAATGCAGGTAGGGACTAGAGTGGATTTTCCT +
Preference number: 6 (lower is better)
Translates to: RVGPMLATGKQG*EMQVGTRVDFP
Trigger: AGGAAAATCCACTCTAGTCCCTACCTGCATTTCTCAGCCTTGCTTACCTGTTGCCAACATTGGGCCAACCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298573.9
ENST00000545864.1
ENST00000626413.3
ENST00000630190.1
CDS CAA 72 bp GCTGGCAGCCAAGATAAAGATTGGGAAGAATTCGGGTaGGCCCAATGTTGGCAACAGGTAAGCAAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: AGSQDKDWEEFG*AQCWQQVSKAE
Trigger: CTCAGCCTTGCTTACCTGTTGCCAACATTGGGCCAACCCGAATTCTTCCCAATCTTTATCTTGGCTGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298573.9
ENST00000545864.1
ENST00000626413.3
ENST00000630190.1
CDS CAA 90 bp TTTTCAGCAAGAGCCCTCCAAGTGAATGTCTCTTTCTCTTTCCCGTaGATGTGCTCTTGCAAAGGACTCCGTCCACAAAGCAGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: FSARALQVNVSFSFP*MCSCKGLRPQSSPS
Trigger: TGAGGGGCTGCTTTGTGGACGGAGTCCTTTGCAAGAGCACATCAACGGGAAAGAGAAAGAGACATTCACTTGGAGGGCTCTTGCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000539940.1
ENST00000541207.1
ENST00000626413.3
ENST00000626461.1
ENST00000628303.1
ENST00000629698.1
CDS GCA 72 bp TTGGAGCAGCCAGCGCATTACATCATTCTTTACCTTTaGTCCCGCGCTCCAACAGCTTTACACTGGACTGAA +
Preference number: 6 (lower is better)
Translates to: LEQPAHYIILYL*SRAPTALHWTE
Trigger: TTCAGTCCAGTGTAAAGCTGTTGGAGCGCGGGAGCAAAGGTAAAGAATGATGTAATGCGCTGGCTGCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000536236.1
ENST00000539940.1
ENST00000541207.1
ENST00000626413.3
ENST00000626461.1
ENST00000627160.1
ENST00000628303.1
ENST00000629698.1
CDS CAA 90 bp TTCCGTTCCACTTTCCAGCAGAGCCACCAACCTCTCAGTAACAATTaGAGTTCCAATCATCTCATGGGCCATGACAACAATAAGTCCTCT +
Preference number: 6 (lower is better)
Translates to: FRSTFQQSHQPLSNN*SSNHLMGHDNNKSS
Trigger: AGAGGACTTATTGTTGTCATGGCCCATGAGATGATTGGAACTCAAATTGTTACTGAGAGGTTGGTGGCTCTGCTGGAAAGTGGAACGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000539940.1
ENST00000626413.3
ENST00000626461.1
ENST00000628303.1
CDS CCA 72 bp AGCATAAATCCTTTGAGGAAACGGTTATCCTTTACGTaGACTCTCCATCAGCCCCATAAGGTGAGTGGCATA +
Preference number: 6 (lower is better)
Translates to: SINPLRKRLSFT*TLHQPHKVSGI
Trigger: TATGCCACTCACCTTATGGGGCTGATGGAGAGTCCACGTAAAGGATAACCGTTTCCTCAAAGGATTTATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536236.1
ENST00000627160.1
CDS CAA 72 bp TGCAAAGGACTCCGTCCACAAAGCAGCCCCTCACATTaGATTCATAAAGAGATGACTGGAATAACCATTCCA +
Preference number: 6 (lower is better)
Translates to: CKGLRPQSSPSH*IHKEMTGITIP
Trigger: TGGAATGGTTATTCCAGTCATCTCTTTATGAATCAAATGTGAGGGGCTGCTTTGTGGACGGAGTCCTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000539940.1
ENST00000541207.1
ENST00000626413.3
ENST00000626461.1
ENST00000628303.1
ENST00000629698.1
CDS CAA 72 bp ACTTTCCAGCAGAGCCACCAACCTCTCAGTAACAATTaGAGTTCCAATCATCTCATGGGCCATGACAACAAT +
Preference number: 6 (lower is better)
Translates to: TFQQSHQPLSNN*SSNHLMGHDNN
Trigger: ATTGTTGTCATGGCCCATGAGATGATTGGAACTCAAATTGTTACTGAGAGGTTGGTGGCTCTGCTGGAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000539940.1
ENST00000626413.3
ENST00000626461.1
ENST00000628303.1
CDS CAA 90 bp ATGTGCTCTTGCAAAGGACTCCGTCCACAAAGCAGCCCCTCACATTaGATTCATAAAGAGATGACTGGAATAACCATTCCACAACAAAAG +
Preference number: 6 (lower is better)
Translates to: MCSCKGLRPQSSPSH*IHKEMTGITIPQQK
Trigger: CTTTTGTTGTGGAATGGTTATTCCAGTCATCTCTTTATGAATCAAATGTGAGGGGCTGCTTTGTGGACGGAGTCCTTTGCAAGAGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000539940.1
ENST00000541207.1
ENST00000626413.3
ENST00000626461.1
ENST00000628303.1
ENST00000629698.1
CDS GCA 72 bp CCTTCTTTAATTTGCCACGATGATGTAATGGTGGTGTaGTCAAAGGCTCAGCCACTCCATTGTACTAAAAGT +
Preference number: 6 (lower is better)
Translates to: PSLICHDDVMVV*SKAQPLHCTKS
Trigger: ACTTTTAGTACAATGGAGTGGCTGAGCCTTTGAGCACACCACCATTACATCATCGTGGCAAATTAAAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000539940.1
ENST00000541207.1
ENST00000626413.3
ENST00000626461.1
ENST00000628303.1
ENST00000629698.1
CDS GCA 72 bp ACAATAAGTCCTCTTTTCCCACCTCCTTCTTTAATTTaGCACGATGATGTAATGGTGGTGTGCTCAAAGGCT +
Preference number: 6 (lower is better)
Translates to: TISPLFPPPSLI*HDDVMVVCSKA
Trigger: AGCCTTTGAGCACACCACCATTACATCATCGTGGCAAATTAAAGAAGGAGGTGGGAAAAGAGGACTTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000539940.1
ENST00000541207.1
ENST00000626413.3
ENST00000626461.1
ENST00000628303.1
ENST00000629698.1
CDS CCA 72 bp AGCGCGGATGAGGTCATTGGTTTAAAAATAAAGAGATaGCGTCACTTGAAACCAATCCCAGTGAATGAACTC +
Preference number: 6 (lower is better)
Translates to: SADEVIGLKIKR*RHLKPIPVNEL
Trigger: GAGTTCATTCACTGGGATTGGTTTCAAGTGACGCCATCTCTTTATTTTTAAACCAATGACCTCATCCGCGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298573.9
ENST00000626413.3
CDS CAA 72 bp GATGACTGGAATAACCATTCCACAACAAAAGATGCTTaGGAGCAGCCAGCGCATTACATCATTCTTTACCTT +
Preference number: 6 (lower is better)
Translates to: DDWNNHSTTKDA*EQPAHYIILYL
Trigger: AAGGTAAAGAATGATGTAATGCGCTGGCTGCTCCAAAGCATCTTTTGTTGTGGAATGGTTATTCCAGTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000536236.1
ENST00000539940.1
ENST00000541207.1
ENST00000626413.3
ENST00000626461.1
ENST00000627160.1
ENST00000628303.1
ENST00000629698.1
CDS CAA 72 bp AACACTTTGTCCTGTTGCAACCTTCGCTTCATAAGCTaGGAGCAGTTGATATTAATGGCTTCCAAAATGTGG +
Preference number: 6 (lower is better)
Translates to: NTLSCCNLRFIS*EQLILMASKMW
Trigger: CCACATTTTGGAAGCCATTAATATCAACTGCTCCAAGCTTATGAAGCGAAGGTTGCAACAGGACAAAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS CAA 90 bp AGCTTGGAGCAGTTGATATTAATGGCTTCCAAAATGTGGGATGTATaGTATTCCACAAATGGCCGGCTATCAATTAGCAGCACTTTTTCC +
Preference number: 6 (lower is better)
Translates to: SLEQLILMASKMWDV*YSTNGRLSISSTFS
Trigger: GGAAAAAGTGCTGCTAATTGATAGCCGGCCATTTGTGGAATACAATACATCCCACATTTTGGAAGCCATTAATATCAACTGCTCCAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS CCA 72 bp ATGACTGGAATAACCATTCCACAACAAAAGATGCTTTaGAGCAGCCAGCGCATTACATCATTCTTTACCTTT +
Preference number: 6 (lower is better)
Translates to: MTGITIPQQKML*SSQRITSFFTF
Trigger: AAAGGTAAAGAATGATGTAATGCGCTGGCTGCTCCAAAGCATCTTTTGTTGTGGAATGGTTATTCCAGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000536236.1
ENST00000539940.1
ENST00000541207.1
ENST00000626413.3
ENST00000626461.1
ENST00000627160.1
ENST00000628303.1
ENST00000629698.1
CDS CAA 72 bp CAGTTGATATTAATGGCTTCCAAAATGTGGGATGTATaGTATTCCACAAATGGCCGGCTATCAATTAGCAGC +
Preference number: 6 (lower is better)
Translates to: QLILMASKMWDV*YSTNGRLSISS
Trigger: GCTGCTAATTGATAGCCGGCCATTTGTGGAATACAATACATCCCACATTTTGGAAGCCATTAATATCAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1
CDS CAA 90 bp TCTGTAATTAACACTTTGTCCTGTTGCAACCTTCGCTTCATAAGCTaGGAGCAGTTGATATTAATGGCTTCCAAAATGTGGGATGTATTG +
Preference number: 6 (lower is better)
Translates to: SVINTLSCCNLRFIS*EQLILMASKMWDVL
Trigger: CAATACATCCCACATTTTGGAAGCCATTAATATCAACTGCTCCAAGCTTATGAAGCGAAGGTTGCAACAGGACAAAGTGTTAATTACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228862.3
ENST00000298573.9
ENST00000626413.3
ENST00000628303.1