RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DUSP13 (Homo sapiens)

Ensembl gene IDs: ENSG00000079393

Ensembl transcript IDs: ENST00000308475.10, ENST00000372700.7, ENST00000372702.7, ENST00000394707.7, ENST00000464872.5, ENST00000472493.6, ENST00000473072.2, ENST00000478873.6, ENST00000478873.7, ENST00000479884.6, ENST00000491677.6, ENST00000494588.2, ENST00000605915.5, ENST00000607009.1, ENST00000607131.5, ENST00000607487.5

Found 856 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCCGACCCCACGCTGGGCTTCCACCATCTTCTGTGTGTCCGCCTaGGCCAGAGCCTCCAGCAGCACCAGCAGGATCAGTGCCAGGGTG +
Preference number: 1 (lower is better)
Translates to: GPTPRWASTIFCVSA*ARASSSTSRISARV
Trigger: CACCCTGGCACTGATCCTGCTGGTGCTGCTGGAGGCTCTGGCCCAGGCGGACACACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000494588.2
3UTR GCA 90 bp AACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTaGCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGC +
Preference number: 1 (lower is better)
Translates to: NRPVSRPSRLSRTWS*RRKPELGQILRWAC
Trigger: GCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR TCA 90 bp CCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTaGGTTAGGGCAGATATTGCGGTGGGCCTGCACCGTCTGGATGGC +
Preference number: 1 (lower is better)
Translates to: PPQSVVQNLELPEEA*VRADIAVGLHRLDG
Trigger: GCCATCCAGACGGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR GCA 90 bp CAGCAAGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATaGCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTT +
Preference number: 1 (lower is better)
Translates to: QQALQRSQCGRLVGR*LDCPMDLGPPEVLL
Trigger: AAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR GCA 90 bp AATCAGGGAGGTCGTGGGCTGGCACCCCCAGGTAGCTCACACTGCTaGCGTAGAAGTCAGGGCCGCCCTGACAGTAGAGGCCCTTGTGGG +
Preference number: 1 (lower is better)
Translates to: NQGGRGLAPPGSSHC*RRSQGRPDSRGPCG
Trigger: CCCACAAGGGCCTCTACTGTCAGGGCGGCCCTGACTTCTACGGCAGCAGTGTGAGCTACCTGGGGGTGCCAGCCCACGACCTCCCTGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494588.2
3UTR CCA 90 bp TGGCAGCCTGACGGACCCACAGCAAGCGCTGCAGCGAAGCCAATGTaGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGG +
Preference number: 1 (lower is better)
Translates to: WQPDGPTASAAAKPM*AAGREMPGLPHGSW
Trigger: CCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGTCCGTCAGGCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR CCA 90 bp GATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTaGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGG +
Preference number: 1 (lower is better)
Translates to: DQNRPVSRPSRLSRT*SCRRKPELGQILRW
Trigger: CCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR TCA 90 bp AAGAGGCTGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTaGCGGACCCACAGCAAGCGCTGCAGCGAAGCCAATGTGGGCGGC +
Preference number: 1 (lower is better)
Translates to: KRLGQTSSIWFSVAA*RTHSKRCSEANVGG
Trigger: GCCGCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCAGCCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR GCA 90 bp CAAAATCAGGGAGGTCGTGGGCTGGCACCCCCAGGTAGCTCACACTaGTGCCGTAGAAGTCAGGGCCGCCCTGACAGTAGAGGCCCTTGT +
Preference number: 1 (lower is better)
Translates to: QNQGGRGLAPPGSSH*CRRSQGRPDSRGPC
Trigger: ACAAGGGCCTCTACTGTCAGGGCGGCCCTGACTTCTACGGCAGCAGTGTGAGCTACCTGGGGGTGCCAGCCCACGACCTCCCTGATTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494588.2
3UTR GCA 90 bp GCTTCTGCAGTGAGTCCATCCTGTGGGAGTATCTGGCCCAGGCTGTaGACTTCTCTGACGGGCAGTTCGTGCTGCTGGCTTTCAGCCGCC +
Preference number: 1 (lower is better)
Translates to: ASAVSPSCGSIWPRL*TSLTGSSCCWLSAA
Trigger: GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCCTGGGCCAGATACTCCCACAGGATGGACTCACTGCAGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR TCA 90 bp CTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTaGTTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACG +
Preference number: 1 (lower is better)
Translates to: LCPPGTCLQRHSQRG*FPAGSACSCPGLRT
Trigger: CGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR CCA 90 bp ACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTaGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCA +
Preference number: 1 (lower is better)
Translates to: TWSCRRKPELGQILR*ACTVWMASTSVMFS
Trigger: TGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR GCA 90 bp AGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTaGACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATC +
Preference number: 1 (lower is better)
Translates to: SCRRKPELGQILRWA*TVWMASTSVMFSQI
Trigger: GATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR CCA 90 bp AGAGGAGAAGTAGGCACTGATGTCAAAATCAGGGAGGTCGTGGGCTaGCACCCCCAGGTAGCTCACACTGCTGCCGTAGAAGTCAGGGCC +
Preference number: 1 (lower is better)
Translates to: RGEVGTDVKIREVVG*HPQVAHTAAVEVRA
Trigger: GGCCCTGACTTCTACGGCAGCAGTGTGAGCTACCTGGGGGTGCCAGCCCACGACCTCCCTGATTTTGACATCAGTGCCTACTTCTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494588.2
3UTR CCA 90 bp CCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTaGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAA +
Preference number: 1 (lower is better)
Translates to: PPRCHSTPGTFHGRI*HLCPPGTCLQRHSQ
Trigger: TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR CCA 90 bp AGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCACCGTCTaGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAG +
Preference number: 1 (lower is better)
Translates to: RKPELGQILRWACTV*MASTSVMFSQIMRK
Trigger: CTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR CCA 90 bp TATAGAGATGGACTGAACTCACTTTTGCATAAAGAATCTCTGAATTaGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATC +
Preference number: 1 (lower is better)
Translates to: YRDGLNSLLHKESLN*VREIHPLRGHHPAI
Trigger: GATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGAGTTCAGTCCATCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000478873.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
3UTR-3UTR CCA 90 bp ACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGACTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: TAPSPAPVGCPEPGAAGGLPHGS*ASGGPA
Trigger: AGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG...TCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR CAA 90 bp GGCTGCCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTaGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAG +
Preference number: 2 (lower is better)
Translates to: GCLPDQNRPVSRPSR*SRTWSCRRKPELGQ
Trigger: CTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
3UTR-3UTR TCA 90 bp CGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGGGCTGTGCACTTCTCTaGCGGGCAGTTCGTGCTGCT +
Preference number: 2 (lower is better)
Translates to: RPVSRPSRLSRTWSCRRKGCALL*RAVRAA
Trigger: AGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCC...CTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR TCA 90 bp ACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAGGCTGTGCACTTCTCTaGCGGGCAGTTCGTGCTGCT +
Preference number: 2 (lower is better)
Translates to: TAPSPAPVGCPEPGAAGGGCALL*RAVRAA
Trigger: AGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCC...TCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR TCA 90 bp AGGCGCCAGGAGGAGCCAGATGGAGTAGCAGGCTCTAGGGCCGACCCCACGCTGTTCAGTGTGGCAGCCTaGCGGACCCACAGCAAGCGC +
Preference number: 2 (lower is better)
Translates to: RRQEEPDGVAGSRADPTLFSVAA*RTHSKR
Trigger: GCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAA...CAGCGTGGGGTCGGCCCTAGAGCCTGCTACTCCATCTGGCTCCTCCTGGCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000494588.2
3UTR-3UTR GCA 90 bp CCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCACGGGCAGTTCGTGCTaGTGGCTTTCAGCCGCCTGT +
Preference number: 2 (lower is better)
Translates to: PRLPPQSVVQNLELPEEATGSSC*WLSAAC
Trigger: ACAGGCGGCTGAAAGCCAGCAGCACGAACTGCCCGT...GGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp AGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCGCCTGGACTGCCCCATaGATCTTGGGCCTCCGGAGG +
Preference number: 2 (lower is better)
Translates to: SAAAKPMWAAGREMPGLPAWTAP*ILGLRR
Trigger: CCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGC...GGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGACCAGCACGCGGCCTTaGGGAACACTGAGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: PSPAPVGCPEPGAAGGSLTSTRP*GTLRAA
Trigger: AGCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGT...CAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCAGCGGCTTACCCCCATaGCACAGTGTACCAGCACGC +
Preference number: 2 (lower is better)
Translates to: PRLPPQSVVQNLELPEEASGLPP*HSVPAR
Trigger: GCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGCT...GGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR TCA 90 bp CCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGGCTGTGCACTTCTCTaGCGGGCAGTTCGTGCTGCT +
Preference number: 2 (lower is better)
Translates to: PVSRPSRLSRTWSCRRKPGCALL*RAVRAA
Trigger: AGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCC...AGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR TCA 90 bp CTGCCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACTTCAGTGTGGCAGCCTaGCGGACCCACAGCAAGCGC +
Preference number: 2 (lower is better)
Translates to: LPARSEPPRLPPQSVVQNFSVAA*RTHSKR
Trigger: GCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAA...GTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAATCTGGCCCAGGCTGTaGACTTCTCTGACGGGCAGT +
Preference number: 2 (lower is better)
Translates to: PPRLPPQSVVQNLELPEEIWPRL*TSLTGS
Trigger: ACTGCCCGTCAGAGAAGTGCACAGCCTGGGCCAGAT...TTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATC +
Preference number: 2 (lower is better)
Translates to: GRLVGRCLDCPMDLGPPEGLRRS*FCSESI
Trigger: GATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCC...CTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CTGCCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACACCAGCACGCGGCCTTaGGGAACACTGAGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: LPARSEPPRLPPQSVVQNTSTRP*GTLRAA
Trigger: AGCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGT...GTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp GGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGGCAGTTCGTGCTGCTaGCTTTCAGCCGCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: GRLVGRCLDCPMDLGPPEGSSCC*LSAACL
Trigger: GAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCC...CTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR TCA 90 bp TGCCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCGGCCTTGGGGAACACTaGGGGCAGCTCGGATGTATC +
Preference number: 2 (lower is better)
Translates to: CLPDQNRPVSRPSRLSRTGLGEH*GQLGCI
Trigger: GATACATCCGAGCTGCCCTCAGTGTTCCCCAAGGCC...GGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGGGAGATGCCTGGACTaGCCCATGGATCTTGGGCCT +
Preference number: 2 (lower is better)
Translates to: PARSEPPRLPPQSVVQNLGRCLD*PMDLGP
Trigger: AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC...CAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGATATTGCGGTGGGCCTaGACCGTCTGGATGGCCTCT +
Preference number: 2 (lower is better)
Translates to: PSPAPVGCPEPGAAGGSLILRWA*TVWMAS
Trigger: AGAGGCCATCCAGACGGTGCAGGCCCACCGCAATAT...CAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CTGCCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACGTCAGGGATCCTGGCTaGCTGCCAGATCAGAACCGC +
Preference number: 2 (lower is better)
Translates to: LPARSEPPRLPPQSVVQNVRDPG*LPDQNR
Trigger: GCGGTTCTGATCTGGCAGGCAGCCAGGATCCCTGAC...GTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
3UTR-3UTR GCA 90 bp GTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGGTCAGGGATCCTGGCTaGCTGCCAGATCAGAACCGC +
Preference number: 2 (lower is better)
Translates to: VSRPSRLSRTWSCRRKPEVRDPG*LPDQNR
Trigger: GCGGTTCTGATCTGGCAGGCAGCCAGGATCCCTGAC...CTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
3UTR-3UTR TCA 90 bp GGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCAGTaGGTCCATCCTGTGGGAGTA +
Preference number: 2 (lower is better)
Translates to: GRLVGRCLDCPMDLGPPEVLLLQ*VHPVGV
Trigger: TACTCCCACAGGATGGACTCACTGCAGAAGCAGGAC...CTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CTGCCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACATCTGGCCCAGGCTGTaGACTTCTCTGACGGGCAGT +
Preference number: 2 (lower is better)
Translates to: LPARSEPPRLPPQSVVQNIWPRL*TSLTGS
Trigger: ACTGCCCGTCAGAGAAGTGCACAGCCTGGGCCAGAT...GTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATC +
Preference number: 2 (lower is better)
Translates to: GRCLDCPMDLGPPEVLLLGLRRS*FCSESI
Trigger: GATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCC...CAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GCGGCTTACCCCCATGGCACAGTGTACCAGCACGCGGCCTTGGGGAACACTGAGCGGCTGGTAGGGAGATaGCTGGACTGCCCCATGGAT +
Preference number: 2 (lower is better)
Translates to: AAYPHGTVYQHAALGNTERLVGR*LDCPMD
Trigger: ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCG...CTCAGTGTTCCCCAAGGCCGCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GCGGCTTACCCCCATGGCACAGTGTACCAGCACGCGGCCTTGGGGAACACTGAGACCCACAGCAAGCGCTaGAGCGAAGCCAATGTGGGC +
Preference number: 2 (lower is better)
Translates to: AAYPHGTVYQHAALGNTETHSKR*SEANVG
Trigger: GCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGT...CTCAGTGTTCCCCAAGGCCGCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CCCAGGCTGTGCACTTCTCTGACGGGCAGTTCGTGCTGCTGGCTTTCAGCCGCCCCAGCTGGATCAGCTTaGTCTTGTCCCGGGCTGCGT +
Preference number: 2 (lower is better)
Translates to: PRLCTSLTGSSCCWLSAAPAGSA*SCPGLR
Trigger: ACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGG...GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp GGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGTCCTGTGGGAGTATCTaGCCCAGGCTGTGCACTTCT +
Preference number: 2 (lower is better)
Translates to: GRLVGRCLDCPMDLGPPESCGSI*PRLCTS
Trigger: AGAAGTGCACAGCCTGGGCCAGATACTCCCACAGGA...CTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp GGCTGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCCTGGACTGCCCCATaGATCTTGGGCCTCCGGAGG +
Preference number: 2 (lower is better)
Translates to: GWARPHRYGSVWQPDGPTAWTAP*ILGLRR
Trigger: CCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGC...TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp ACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGATGGGTGATTCCCAGCTaGATCAGCTTGCTCTTGTCC +
Preference number: 2 (lower is better)
Translates to: TAPSPAPVGCPEPGAAGGWVIPS*ISLLLS
Trigger: GGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCA...TCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR TCA 90 bp CTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCAGTGAGTCCATCCGGCTGTGCACTTCTCTaGCGGGCAGTTCGTGCTGCT +
Preference number: 2 (lower is better)
Translates to: LPHGSWASGGPASAVSPSGCALL*RAVRAA
Trigger: AGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCC...GGATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR TCA 90 bp GTGGGTGATTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTTCAGTGTGGCAGCCTaGCGGACCCACAGCAAGCGC +
Preference number: 2 (lower is better)
Translates to: VGDSQLDQLALVPGCVRIFSVAA*RTHSKR
Trigger: GCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAA...GATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR TCA 90 bp CCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCGCAGAAAGTAGACACTaGGGTCGAAGAAGGGGTTGT +
Preference number: 2 (lower is better)
Translates to: PRLPPQSVVQNLELPEEAAESRH*GRRRGC
Trigger: ACAACCCCTTCTTCGACCTCAGTGTCTACTTTCTGC...GGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGATCTGGCCCAGGCTGTaGACTTCTCTGACGGGCAGT +
Preference number: 2 (lower is better)
Translates to: GRCLDCPMDLGPPEVLLLIWPRL*TSLTGS
Trigger: ACTGCCCGTCAGAGAAGTGCACAGCCTGGGCCAGAT...CAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GGACCCACAGCAAGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCGGAGGTCCTGCTTCTaGAGTGAGTCCATCCTGTGG +
Preference number: 2 (lower is better)
Translates to: GPTASAAAKPMWAAGREMRRSCF*SESILW
Trigger: CCACAGGATGGACTCACTGCAGAAGCAGGACCTCCG...CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCAGGAAGGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATC +
Preference number: 2 (lower is better)
Translates to: PSWISLLLSRAAYASPRKGLRRS*FCSESI
Trigger: GATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCC...CTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATC +
Preference number: 2 (lower is better)
Translates to: AKPMWAAGREMPGLPHGSGLRRS*FCSESI
Trigger: GATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCC...AGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCAGTGAGTCCATCCACCCACAGCAAGCGCTaGAGCGAAGCCAATGTGGGC +
Preference number: 2 (lower is better)
Translates to: LPHGSWASGGPASAVSPSTHSKR*SEANVG
Trigger: GCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGT...GGATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GTGGGTGATTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCCTGACGGGCAGTTCGTaGTGCTGGCTTTCAGCCGCC +
Preference number: 2 (lower is better)
Translates to: VGDSQLDQLALVPGCVRILTGSS*CWLSAA
Trigger: GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAG...GATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GGACCCACAGCAAGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCAGGTAGCTCACACTaGTGCCGTAGAAGTCAGGGC +
Preference number: 2 (lower is better)
Translates to: GPTASAAAKPMWAAGREMPGSSH*CRRSQG
Trigger: GCCCTGACTTCTACGGCAGCAGTGTGAGCTACCTGG...CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494588.2
3UTR-3UTR CCA 90 bp GCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCTCCCAGGAAGAGGCTaGGCCAGACCTCATCGATAT +
Preference number: 2 (lower is better)
Translates to: AAGREMPGLPHGSWASGGLPGRG*ARPHRY
Trigger: ATATCGATGAGGTCTGGCCCAGCCTCTTCCTGGGAG...ACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp GGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAAGCCAGGGTGGCAAAGTaGCAGAGCCCCATGGCAGGG +
Preference number: 2 (lower is better)
Translates to: GPDLIDMVQCGSLTDPQQARVAK*QSPMAG
Trigger: CCCTGCCATGGGGCTCTGCCACTTTGCCACCCTGGC...TTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000494588.2
3UTR-3UTR CCA 90 bp GTGGGTGATTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCGGGCCGACCCCACGCTaGGCTTCCACCATCTTCTGT +
Preference number: 2 (lower is better)
Translates to: VGDSQLDQLALVPGCVRIGPTPR*ASTIFC
Trigger: ACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGCCC...GATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000494588.2
3UTR CAA 90 bp TCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATaGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATG +
Preference number: 2 (lower is better)
Translates to: SRTWSCRRKPELGQI*RWACTVWMASTSVM
Trigger: CATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTATCTGGCCCAGGCTGTaGACTTCTCTGACGGGCAGT +
Preference number: 2 (lower is better)
Translates to: QCGRLVGRCLDCPMDLGPIWPRL*TSLTGS
Trigger: ACTGCCCGTCAGAGAAGTGCACAGCCTGGGCCAGAT...AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GCTGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGGGGAGATGCCTGGACTaGCCCATGGATCTTGGGCCT +
Preference number: 2 (lower is better)
Translates to: AGPDLIDMVQCGSLTDPQGRCLD*PMDLGP
Trigger: AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC...CTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GGCTGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAACCCACAGCAAGCGCTaGAGCGAAGCCAATGTGGGC +
Preference number: 2 (lower is better)
Translates to: GWARPHRYGSVWQPDGPTTHSKR*SEANVG
Trigger: GCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGT...TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCAGGAAGAGCCAGCTGGATCAGCTTaGTCTTGTCCCGGGCTGCGT +
Preference number: 2 (lower is better)
Translates to: QLDQLALVPGCVRISQEEPAGSA*SCPGLR
Trigger: ACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGG...CTCTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GCGGCTTACCCCCATGGCACAGTGTACCAGCACGCGGCCTTGGGGAACACTGAGTGTCGTCCGCCTCGATaGCATAGTACTCCAGGGACA +
Preference number: 2 (lower is better)
Translates to: AAYPHGTVYQHAALGNTECRPPR*HSTPGT
Trigger: TGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA...CTCAGTGTTCCCCAAGGCCGCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GCGGCTTACCCCCATGGCACAGTGTACCAGCACGCGGCCTTGGGGAACACTGAGTCCAGAACCTGGAGCTaGCGGAGGAAGCCTGAGTTA +
Preference number: 2 (lower is better)
Translates to: AAYPHGTVYQHAALGNTESRTWS*RRKPEL
Trigger: TAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGA...CTCAGTGTTCCCCAAGGCCGCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp GGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATCTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: GTCVHLELACSGIHNVGDLPHGS*ASGGPA
Trigger: AGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG...ATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTCCCCTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: PVSTWNLPAAAFTTWVIPLPHGS*ASGGPA
Trigger: AGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG...GGGAATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTCCCGGGCCGACCCCACGCTaGGCTTCCACCATCTTCTGT +
Preference number: 2 (lower is better)
Translates to: PVSTWNLPAAAFTTWVIPGPTPR*ASTIFC
Trigger: ACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGCCC...GGGAATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000494588.2
3UTR-3UTR CCA 90 bp GGCTGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGGCAGTTCGTGCTGCTaGCTTTCAGCCGCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: GWARPHRYGSVWQPDGPTGSSCC*LSAACL
Trigger: GAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCC...TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp GCTGGCTTTCAGCCGCCTGTCTCCGCACACTTGATGCTGTTTCTGTGGAGACTGAGGGAGGTCGTGGGCTaGCACCCCCAGGTAGCTCAC +
Preference number: 2 (lower is better)
Translates to: AGFQPPVSAHLMLFLWRLREVVG*HPQVAH
Trigger: GTGAGCTACCTGGGGGTGCCAGCCCACGACCTCCCT...CAGTCTCCACAGAAACAGCATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494588.2
3UTR-3UTR TCA 90 bp TGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCACCGTCCTGCTTCTGCAGTaGGTCCATCCTGTGGGAGTA +
Preference number: 2 (lower is better)
Translates to: WSCRRKPELGQILRWACTVLLLQ*VHPVGV
Trigger: TACTCCCACAGGATGGACTCACTGCAGAAGCAGGAC...GGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR TCA 90 bp GGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCATTCACAACGTGGGTaGTTCCCAGCTGGATCAGCT +
Preference number: 2 (lower is better)
Translates to: GRCLDCPMDLGPPEVLLLHSQRG*FPAGSA
Trigger: AGCTGATCCAGCTGGGAATCACCCACGTTGTGAATG...CAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GTGATTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCCGGAGGTCCTGCTTCTaGAGTGAGTCCATCCTGTGG +
Preference number: 2 (lower is better)
Translates to: VIPSWISLLLSRAAYASPRRSCF*SESILW
Trigger: CCACAGGATGGACTCACTGCAGAAGCAGGACCTCCG...GGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTCCCGGGAGATGCCTGGACTaGCCCATGGATCTTGGGCCT +
Preference number: 2 (lower is better)
Translates to: PVSTWNLPAAAFTTWVIPGRCLD*PMDLGP
Trigger: AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC...GGGAATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp ACAACGTGGGTGATTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACCGGCTGGTAGGGAGATaGCTGGACTGCCCCATGGAT +
Preference number: 2 (lower is better)
Translates to: TTWVIPSWISLLLSRAAYRLVGR*LDCPMD
Trigger: ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCG...GTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCACGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp ACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCCACCTGGAACTTGCCTaGAGCGGCATTCACAACGTG +
Preference number: 2 (lower is better)
Translates to: TWSCRRKPELGQILRWACHLELA*SGIHNV
Trigger: CACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTG...GCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CCCAGGCTGTGCACTTCTCTGACGGGCAGTTCGTGCTGCTGGCTTTCAGCCGCCTGTCCACCTGGAACTTaGCTGCAGCGGCATTCACAA +
Preference number: 2 (lower is better)
Translates to: PRLCTSLTGSSCCWLSAACPPGT*LQRHSQ
Trigger: TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACA...GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp AGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCACCGTCTCCAGAACCTGGAGCTaGCGGAGGAAGCCTGAGTTA +
Preference number: 2 (lower is better)
Translates to: SCRRKPELGQILRWACTVSRTWS*RRKPEL
Trigger: TAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGA...GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCAGGAAGAGTGAGTCCATCCTGTaGGAGTATCTGGCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: PSWISLLLSRAAYASPRKSESIL*EYLAQA
Trigger: AGCCTGGGCCAGATACTCCCACAGGATGGACTCACT...CTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCAGGAAGCTCCCAGGAAGAGGCTaGGCCAGACCTCATCGATAT +
Preference number: 2 (lower is better)
Translates to: PSWISLLLSRAAYASPRKLPGRG*ARPHRY
Trigger: ATATCGATGAGGTCTGGCCCAGCCTCTTCCTGGGAG...CTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCTGGGCCTGCACCGTCTaGATGGCCTCTACCAGCGTC +
Preference number: 2 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCWACTV*MASTSV
Trigger: GACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCA...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
3UTR-3UTR CCA 90 bp GGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATAGTGGCAGAGCCCCATaGCAGGGAGTAAGGACCAGC +
Preference number: 2 (lower is better)
Translates to: GTCVHLELACSGIHNVGDSGRAP*QGVRTS
Trigger: GCTGGTCCTTACTCCCTGCCATGGGGCTCTGCCACT...ATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000494588.2
3UTR-3UTR CCA 90 bp GGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATGGATCAGTGCCAGGGTaGCAAAGTGGCAGAGCCCCA +
Preference number: 2 (lower is better)
Translates to: GTCVHLELACSGIHNVGDGSVPG*QSGRAP
Trigger: TGGGGCTCTGCCACTTTGCCACCCTGGCACTGATCC...ATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000494588.2
3UTR-3UTR CCA 90 bp CGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGGGGCCGACCCCACGCTaGGCTTCCACCATCTTCTGT +
Preference number: 2 (lower is better)
Translates to: RLSRTWSCRRKPELGQILGPTPR*ASTIFC
Trigger: ACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGCCC...CAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000494588.2
3UTR-3UTR TCA 90 bp GGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCAGGAAGAGGCTGGCATTCACAACGTGGGTaGTTCCCAGCTGGATCAGCT +
Preference number: 2 (lower is better)
Translates to: GSACSCPGLRTHLPGRGWHSQRG*FPAGSA
Trigger: AGCTGATCCAGCTGGGAATCACCCACGTTGTGAATG...CCAGCCTCTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR TCA 90 bp CTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCAGTGAGTCCATCCTGTTTCTGTGGAGACTaGAGACAGTGGCTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: LPHGSWASGGPASAVSPSCFCGD*RQWLRG
Trigger: CCCTCTCAGCCACTGTCTTCAGTCTCCACAGAAACA...GGATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCCGGAGGTCCTGCTTCTaGAGTGAGTCCATCCTGTGG +
Preference number: 2 (lower is better)
Translates to: DIAVGLHRLDGLYQRHVLRRSCF*SESILW
Trigger: CCACAGGATGGACTCACTGCAGAAGCAGGACCTCCG...GAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTCGGCTGGTAGGGAGATaGCTGGACTGCCCCATGGAT +
Preference number: 2 (lower is better)
Translates to: APVSTWNLPAAAFTTWVIRLVGR*LDCPMD
Trigger: ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCG...AATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CGAAGAAGGGGTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACCCAGCTGGATCAGCTTaGTCTTGTCCCGGGCTGCGT +
Preference number: 2 (lower is better)
Translates to: RRRGCRPPRCHSTPGTFHPAGSA*SCPGLR
Trigger: ACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGG...GTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAACCCCTTCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GGCTGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACATGTCGTCCGCCTCGATaGCATAGTACTCCAGGGACA +
Preference number: 2 (lower is better)
Translates to: GWARPHRYGSVWQPDGPTCRPPR*HSTPGT
Trigger: TGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA...TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCCTGACGGGCAGTTCGTaGTGCTGGCTTTCAGCCGCC +
Preference number: 2 (lower is better)
Translates to: LQGHSTVEFGTCVHLELALTGSS*CWLSAA
Trigger: GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAG...GGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCTCCTGTGGGAGTATCTaGCCCAGGCTGTGCACTTCT +
Preference number: 2 (lower is better)
Translates to: RWACTVWMASTSVMFSQISCGSI*PRLCTS
Trigger: AGAAGTGCACAGCCTGGGCCAGATACTCCCACAGGA...GATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp GTGGGTGATTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCTGTGGGAGTATCTaGCCCAGGCTGTGCACTTCT +
Preference number: 2 (lower is better)
Translates to: VGDSQLDQLALVPGCVRISCGSI*PRLCTS
Trigger: AGAAGTGCACAGCCTGGGCCAGATACTCCCACAGGA...GATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp GGCTGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAAGTGAGTCCATCCTGTaGGAGTATCTGGCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: GWARPHRYGSVWQPDGPTSESIL*EYLAQA
Trigger: AGCCTGGGCCAGATACTCCCACAGGATGGACTCACT...TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTGCCTGGACTGCCCCATaGATCTTGGGCCTCCGGAGG +
Preference number: 2 (lower is better)
Translates to: ESLNWVREIHPLRGHHPAAWTAP*ILGLRR
Trigger: CCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGC...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
3UTR-3UTR CCA 90 bp GGTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTGCCTGGACTGCCCCATaGATCTTGGGCCTCCGGAGG +
Preference number: 2 (lower is better)
Translates to: GCRPPRCHSTPGTFHGRIAWTAP*ILGLRR
Trigger: CCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGC...AATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGGCAGCGAAGCCAATGTaGGCGGCTGGTAGGGAGATG +
Preference number: 2 (lower is better)
Translates to: RLSRTWSCRRKPELGQILAAKPM*AAGREM
Trigger: CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGC...CAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CAAGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCTTCCACGGTAGAATTTaGCACCTGTGTCCACCTGGA +
Preference number: 2 (lower is better)
Translates to: QALQRSQCGRLVGRCLDCFHGRI*HLCPPG
Trigger: TCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAA...GCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGAGCGGCTTACCCCCATaGCACAGTGTACCAGCACGC +
Preference number: 2 (lower is better)
Translates to: RLSRTWSCRRKPELGQILSGLPP*HSVPAR
Trigger: GCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGCT...CAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGCCAGGGCCAGGCTGGTaGGGTTGGGCCAAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: LAVYISGSLETAEPAVPRPGPGW*GWAKGQ
Trigger: CTGACCCTTGGCCCAACCCCACCAGCCTGGCCCTGG...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000478873.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
3UTR-3UTR CCA 90 bp CGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGGGATCAGTGCCAGGGTaGCAAAGTGGCAGAGCCCCA +
Preference number: 2 (lower is better)
Translates to: RLSRTWSCRRKPELGQILGSVPG*QSGRAP
Trigger: TGGGGCTCTGCCACTTTGCCACCCTGGCACTGATCC...CAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000494588.2
3UTR-3UTR TCA 90 bp CTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGTGTGGCTTCAGTGTGGCAGCCTaGCGGACCCACAGCAAGCGC +
Preference number: 2 (lower is better)
Translates to: LYQRHVLTDHEEGQDKCGFSVAA*RTHSKR
Trigger: GCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAA...GCCACACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR TCA 90 bp CGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCTGTTTCTGTGGAGACTaGAGACAGTGGCTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: RWACTVWMASTSVMFSQICFCGD*RQWLRG
Trigger: CCCTCTCAGCCACTGTCTTCAGTCTCCACAGAAACA...GATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCCGGAGGTCCTGCTTCTaGAGTGAGTCCATCCTGTGG +
Preference number: 2 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCRRSCF*SESILW
Trigger: CCACAGGATGGACTCACTGCAGAAGCAGGACCTCCG...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
3UTR-3UTR GCA 90 bp TGCTGGCTTTCAGCCGCCTGTCTCCGCACACTTGATGCTGTTTCTGTGGAGACTCGGCTGGTAGGGAGATaGCTGGACTGCCCCATGGAT +
Preference number: 2 (lower is better)
Translates to: CWLSAACLRTLDAVSVETRLVGR*LDCPMD
Trigger: ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCG...AGTCTCCACAGAAACAGCATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GCAGATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCACCTGGAACTTGCCTaGAGCGGCATTCACAACGTG +
Preference number: 2 (lower is better)
Translates to: ADIAVGLHRLDGLYQRHVHLELA*SGIHNV
Trigger: CACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTG...AACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGCACCAGCAGGATCAGTaGCAGGGTGGCAAAGTGGCA +
Preference number: 2 (lower is better)
Translates to: ACTVWMASTSVMFSQIMRHQQDQ*QGGKVA
Trigger: TGCCACTTTGCCACCCTGGCACTGATCCTGCTGGTG...CCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000494588.2
3UTR-3UTR CCA 90 bp TTGGGGAACACTGAGGGCAGCTCGGATGTATCGAGCAACAGGCAGAAAGTAGACCTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: LGNTEGSSDVSSNRQKVDLPHGS*ASGGPA
Trigger: AGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG...GTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCTGCCCTCAGTGTTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp GTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGGCAGCGAAGCCAATGTaGGCGGCTGGTAGGGAGATG +
Preference number: 2 (lower is better)
Translates to: VWMASTSVMFSQIMRKARAAKPM*AAGREM
Trigger: CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGC...CCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp GATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCCGATATGGTTCAGTGTaGCAGCCTGACGGACCCACA +
Preference number: 2 (lower is better)
Translates to: DIAVGLHRLDGLYQRHVLRYGSV*QPDGPT
Trigger: TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCG...GAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp GGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATCTCCCAGGAAGAGGCTaGGCCAGACCTCATCGATAT +
Preference number: 2 (lower is better)
Translates to: GTCVHLELACSGIHNVGDLPGRG*ARPHRY
Trigger: ATATCGATGAGGTCTGGCCCAGCCTCTTCCTGGGAG...ATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp TGCTGGCTTTCAGCCGCCTGTCTCCGCACACTTGATGCTGTTTCTGTGGAGACTAGTGGCAGAGCCCCATaGCAGGGAGTAAGGACCAGC +
Preference number: 2 (lower is better)
Translates to: CWLSAACLRTLDAVSVETSGRAP*QGVRTS
Trigger: GCTGGTCCTTACTCCCTGCCATGGGGCTCTGCCACT...AGTCTCCACAGAAACAGCATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000494588.2
3UTR-3UTR CCA 90 bp TTGGGGAACACTGAGGGCAGCTCGGATGTATCGAGCAACAGGCAGAAAGTAGACTTCTGTGTGTCCGCCTaGGCCAGAGCCTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: LGNTEGSSDVSSNRQKVDFCVSA*ARASSS
Trigger: GCTGCTGGAGGCTCTGGCCCAGGCGGACACACAGAA...GTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCTGCCCTCAGTGTTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000494588.2
3UTR-3UTR TCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGGGCTGTGCACTTCTCTaGCGGGCAGTTCGTGCTGCT +
Preference number: 2 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQGCALL*RAVRAA
Trigger: AGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCC...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
3UTR-3UTR GCA 90 bp CTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGTGTGGCGGGAGATGCCTGGACTaGCCCATGGATCTTGGGCCT +
Preference number: 2 (lower is better)
Translates to: LYQRHVLTDHEEGQDKCGGRCLD*PMDLGP
Trigger: AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC...GCCACACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GGTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTGGGAGATGCCTGGACTaGCCCATGGATCTTGGGCCT +
Preference number: 2 (lower is better)
Translates to: GCRPPRCHSTPGTFHGRIGRCLD*PMDLGP
Trigger: AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC...AATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCAGCTATCCCTGCCTCTaGCTCAGCCCCCACTTGCTG +
Preference number: 2 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGSYPCL*LSPHLL
Trigger: CAGCAAGTGGGGGCTGAGGCAGAGGCAGGGATAGCT...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000478873.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
3UTR-3UTR GCA 90 bp CAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCCACCAGCAGGATCAGTaGCAGGGTGGCAAAGTGGCA +
Preference number: 2 (lower is better)
Translates to: QGHSTVEFGTCVHLELACHQQDQ*QGGKVA
Trigger: TGCCACTTTGCCACCCTGGCACTGATCCTGCTGGTG...GCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000494588.2
3UTR-3UTR GCA 90 bp GTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTCTGACGGGCAGTTCGTaGTGCTGGCTTTCAGCCGCC +
Preference number: 2 (lower is better)
Translates to: VVVRLDAIVLQGHSTVEFLTGSS*CWLSAA
Trigger: GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAG...AAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp TGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGGGTAGCTCACACTGCTaGCGTAGAAGTCAGGGCCGC +
Preference number: 2 (lower is better)
Translates to: CRPPRCHSTPGTFHGRIWGSSHC*RRSQGR
Trigger: GCGGCCCTGACTTCTACGGCAGCAGTGTGAGCTACC...CCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494588.2
3UTR-3UTR CCA 90 bp GCTGGCTTTCAGCCGCCTGTCTCCGCACACTTGATGCTGTTTCTGTGGAGACTGTCCTGTGGGAGTATCTaGCCCAGGCTGTGCACTTCT +
Preference number: 2 (lower is better)
Translates to: AGFQPPVSAHLMLFLWRLSCGSI*PRLCTS
Trigger: AGAAGTGCACAGCCTGGGCCAGATACTCCCACAGGA...CAGTCTCCACAGAAACAGCATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCAGTGAGTCCATCCTGTaGGAGTATCTGGCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: HSTVEFGTCVHLELACSGSESIL*EYLAQA
Trigger: AGCCTGGGCCAGATACTCCCACAGGATGGACTCACT...GCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCCTGGACTGCCCCATaGATCTTGGGCCTCCGGAGG +
Preference number: 2 (lower is better)
Translates to: KESLNWVREIHPLRGHHPAWTAP*ILGLRR
Trigger: CCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGC...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
3UTR-3UTR CCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCGCAGCGAAGCCAATGTaGGCGGCTGGTAGGGAGATG +
Preference number: 2 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGAAKPM*AAGREM
Trigger: CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGC...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
3UTR-3UTR CCA 90 bp CGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGATATGGTTCAGTGTaGCAGCCTGACGGACCCACA +
Preference number: 2 (lower is better)
Translates to: RLSRTWSCRRKPELGQILRYGSV*QPDGPT
Trigger: TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCG...CAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp ACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTCCCGATATGGTTCAGTGTaGCAGCCTGACGGACCCACA +
Preference number: 2 (lower is better)
Translates to: TCVHLELACSGIHNVGDSRYGSV*QPDGPT
Trigger: TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCG...GGAATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp GATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCTGGGTGATTCCCAGCTaGATCAGCTTGCTCTTGTCC +
Preference number: 2 (lower is better)
Translates to: DIAVGLHRLDGLYQRHVLWVIPS*ISLLLS
Trigger: GGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCA...GAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGTGGGCCTGCACCGTCTaGATGGCCTCTACCAGCGTC +
Preference number: 2 (lower is better)
Translates to: LAVYISGSLETAEPAVPRWACTV*MASTSV
Trigger: GACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCA...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
3UTR-3UTR CCA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGTTCTGTGTGTCCGCCTaGGCCAGAGCCTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: LAVYISGSLETAEPAVPRFCVSA*ARASSS
Trigger: GCTGCTGGAGGCTCTGGCCCAGGCGGACACACAGAA...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372702.7
3UTR-3UTR CCA 90 bp CGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCATTCTGTGTGTCCGCCTaGGCCAGAGCCTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: RCHSTPGTFHGRIWHLCPFCVSA*ARASSS
Trigger: GCTGCTGGAGGCTCTGGCCCAGGCGGACACACAGAA...TGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000494588.2
3UTR-3UTR CCA 90 bp TTGGGGAACACTGAGGGCAGCTCGGATGTATCGAGCAACAGGCAGAAAGTAGACGGCAGTTCGTGCTGCTaGCTTTCAGCCGCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: LGNTEGSSDVSSNRQKVDGSSCC*LSAACL
Trigger: GAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCC...GTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCTGCCCTCAGTGTTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR TCA 90 bp CTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCGTCCTGCTTCTGCAGTaGGTCCATCCTGTGGGAGTA +
Preference number: 2 (lower is better)
Translates to: LQGHSTVEFGTCVHLELAVLLLQ*VHPVGV
Trigger: TACTCCCACAGGATGGACTCACTGCAGAAGCAGGAC...GGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCATCTGGCCCAGGCTGTaGACTTCTCTGACGGGCAGT +
Preference number: 2 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGIWPRL*TSLTGS
Trigger: ACTGCCCGTCAGAGAAGTGCACAGCCTGGGCCAGAT...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
3UTR-3UTR GCA 90 bp AGCTCGGATGTATCGAGCAACAGGCAGAAAGTAGACACTGAGGTCGAAGAAGGGCGGCTGGTAGGGAGATaGCTGGACTGCCCCATGGAT +
Preference number: 2 (lower is better)
Translates to: SSDVSSNRQKVDTEVEEGRLVGR*LDCPMD
Trigger: ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCG...CCCTTCTTCGACCTCAGTGTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCACCCACAGCAAGCGCTaGAGCGAAGCCAATGTGGGC +
Preference number: 2 (lower is better)
Translates to: PLAVYISGSLETAEPAVPTHSKR*SEANVG
Trigger: GCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGT...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
3UTR-3UTR GCA 90 bp GTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTCCAGCTGGATCAGCTTaGTCTTGTCCCGGGCTGCGT +
Preference number: 2 (lower is better)
Translates to: VVVRLDAIVLQGHSTVEFPAGSA*SCPGLR
Trigger: ACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGG...AAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp GCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGTGTCCACCTGGAACTTaGCTGCAGCGGCATTCACAA +
Preference number: 2 (lower is better)
Translates to: ACTVWMASTSVMFSQIMRCPPGT*LQRHSQ
Trigger: TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACA...CCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGCTATCCCTGCCTCTaGCTCAGCCCCCACTTGCTG +
Preference number: 2 (lower is better)
Translates to: PLAVYISGSLETAEPAVPSYPCL*LSPHLL
Trigger: CAGCAAGTGGGGGCTGAGGCAGAGGCAGGGATAGCT...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000478873.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
3UTR-3UTR GCA 90 bp AGCTCGGATGTATCGAGCAACAGGCAGAAAGTAGACACTGAGGTCGAAGAAGGGACGGGCAGTTCGTGCTaGTGGCTTTCAGCCGCCTGT +
Preference number: 2 (lower is better)
Translates to: SSDVSSNRQKVDTEVEEGTGSSC*WLSAAC
Trigger: ACAGGCGGCTGAAAGCCAGCAGCACGAACTGCCCGT...CCCTTCTTCGACCTCAGTGTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp ATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: IVLQGHSTVEFGTCVHLELPHGS*ASGGPA
Trigger: AGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG...TTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp TCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGTGTGGCAGCAGCGAAGCCAATGTaGGCGGCTGGTAGGGAGATG +
Preference number: 2 (lower is better)
Translates to: STSVMFSQIMRKARTSVAAAKPM*AAGREM
Trigger: CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGC...TGCCACACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp AGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAAGCGCTTGGGTGATTCCCAGCTaGATCAGCTTGCTCTTGTCC +
Preference number: 2 (lower is better)
Translates to: RPHRYGSVWQPDGPTASAWVIPS*ISLLLS
Trigger: GGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCA...AGCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp TGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCATTCCACGGTAGAATTTaGCACCTGTGTCCACCTGGA +
Preference number: 2 (lower is better)
Translates to: WARPHRYGSVWQPDGPTAFHGRI*HLCPPG
Trigger: TCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAA...TGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp GTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGGCAGATATTGCGGTaGGCCTGCACCGTCTGGATG +
Preference number: 2 (lower is better)
Translates to: VVVRLDAIVLQGHSTVEFGQILR*ACTVWM
Trigger: CATCCAGACGGTGCAGGCCCACCGCAATATCTGCCC...AAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCAGGCAGTTCGTGCTGCTaGCTTTCAGCCGCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: RCHSTPGTFHGRIWHLCPGSSCC*LSAACL
Trigger: GAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCC...TGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR TCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTGTCCTGCTTCTGCAGTaGGTCCATCCTGTGGGAGTA +
Preference number: 2 (lower is better)
Translates to: ESLNWVREIHPLRGHHPAVLLLQ*VHPVGV
Trigger: TACTCCCACAGGATGGACTCACTGCAGAAGCAGGAC...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
3UTR-3UTR TCA 90 bp GCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGTGTTCTCACAGATCATaGGGAAGGCCAGGACAAGTG +
Preference number: 2 (lower is better)
Translates to: ACTVWMASTSVMFSQIMRCSHRS*GRPGQV
Trigger: CACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACA...CCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp CAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCTGTCCACCTGGAACTTaGCTGCAGCGGCATTCACAA +
Preference number: 2 (lower is better)
Translates to: QGHSTVEFGTCVHLELACCPPGT*LQRHSQ
Trigger: TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACA...GCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTAGTGAGTCCATCCTGTaGGAGTATCTGGCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: ESLNWVREIHPLRGHHPASESIL*EYLAQA
Trigger: AGCCTGGGCCAGATACTCCCACAGGATGGACTCACT...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
3UTR-3UTR CCA 90 bp TGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCTCCCAGGAAGAGGCTaGGCCAGACCTCATCGATAT +
Preference number: 2 (lower is better)
Translates to: CRPPRCHSTPGTFHGRIWLPGRG*ARPHRY
Trigger: ATATCGATGAGGTCTGGCCCAGCCTCTTCCTGGGAG...CCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp TCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGTGTGGCAGTGTTGAGGGCACGGTaGATGAAGTCAGCCGCAGAG +
Preference number: 2 (lower is better)
Translates to: STSVMFSQIMRKARTSVAVLRAR*MKSAAE
Trigger: CTCTGCGGCTGACTTCATCCACCGTGCCCTCAACAC...TGCCACACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494588.2
3UTR-3UTR GCA 90 bp ATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACGGAGGTCCTGCTTCTaGAGTGAGTCCATCCTGTGG +
Preference number: 2 (lower is better)
Translates to: IVLQGHSTVEFGTCVHLERRSCF*SESILW
Trigger: CCACAGGATGGACTCACTGCAGAAGCAGGACCTCCG...TTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGATCCTGTGGGAGTATCTaGCCCAGGCTGTGCACTTCT +
Preference number: 2 (lower is better)
Translates to: HSTPGTFHGRIWHLCPPGSCGSI*PRLCTS
Trigger: AGAAGTGCACAGCCTGGGCCAGATACTCCCACAGGA...TCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp AGCTCGGATGTATCGAGCAACAGGCAGAAAGTAGACACTGAGGTCGAAGAAGGGAGTGAGTCCATCCTGTaGGAGTATCTGGCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: SSDVSSNRQKVDTEVEEGSESIL*EYLAQA
Trigger: AGCCTGGGCCAGATACTCCCACAGGATGGACTCACT...CCCTTCTTCGACCTCAGTGTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp TCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGTGTGGCACGATATGGTTCAGTGTaGCAGCCTGACGGACCCACA +
Preference number: 2 (lower is better)
Translates to: STSVMFSQIMRKARTSVARYGSV*QPDGPT
Trigger: TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCG...TGCCACACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCCTCCCAGGAAGAGGCTaGGCCAGACCTCATCGATAT +
Preference number: 2 (lower is better)
Translates to: PLAVYISGSLETAEPAVPLPGRG*ARPHRY
Trigger: ATATCGATGAGGTCTGGCCCAGCCTCTTCCTGGGAG...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
3UTR-3UTR CCA 90 bp CTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTTCCACGGTAGAATTTaGCACCTGTGTCCACCTGGA +
Preference number: 2 (lower is better)
Translates to: LQGHSTVEFGTCVHLELAFHGRI*HLCPPG
Trigger: TCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAA...GGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR TCA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGCATTCACAACGTGGGTaGTTCCCAGCTGGATCAGCT +
Preference number: 2 (lower is better)
Translates to: LAVYISGSLETAEPAVPRHSQRG*FPAGSA
Trigger: AGCTGATCCAGCTGGGAATCACCCACGTTGTGAATG...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
3UTR-3UTR TCA 90 bp TCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGTGTGGCACATTCACAACGTGGGTaGTTCCCAGCTGGATCAGCT +
Preference number: 2 (lower is better)
Translates to: STSVMFSQIMRKARTSVAHSQRG*FPAGSA
Trigger: AGCTGATCCAGCTGGGAATCACCCACGTTGTGAATG...TGCCACACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCATGGGTGATTCCCAGCTaGATCAGCTTGCTCTTGTCC +
Preference number: 2 (lower is better)
Translates to: RCHSTPGTFHGRIWHLCPWVIPS*ISLLLS
Trigger: GGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCA...TGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp CTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGTGTGGCTTCCACGGTAGAATTTaGCACCTGTGTCCACCTGGA +
Preference number: 2 (lower is better)
Translates to: LYQRHVLTDHEEGQDKCGFHGRI*HLCPPG
Trigger: TCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAA...GCCACACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp ACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTCCTTGATGCTGTTTCTGTaGAGACTGAAGACAGTGGCT +
Preference number: 2 (lower is better)
Translates to: TCVHLELACSGIHNVGDSLMLFL*RLKTVA
Trigger: AGCCACTGTCTTCAGTCTCCACAGAAACAGCATCAA...GGAATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR TCA 90 bp GTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGCAGAAAGTAGACACTaGGGTCGAAGAAGGGGTTGT +
Preference number: 2 (lower is better)
Translates to: VVVRLDAIVLQGHSTVEFAESRH*GRRRGC
Trigger: ACAACCCCTTCTTCGACCTCAGTGTCTACTTTCTGC...AAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR TCA 90 bp CCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTTGTTCTCACAGATCATaGGGAAGGCCAGGACAAGTG +
Preference number: 2 (lower is better)
Translates to: PRCHSTPGTFHGRIWHLCCSHRS*GRPGQV
Trigger: CACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACA...ACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR GCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAAGCTATCCCTGCCTCTaGCTCAGCCCCCACTTGCTG +
Preference number: 2 (lower is better)
Translates to: SLLHKESLNWVREIHPLRSYPCL*LSPHLL
Trigger: CAGCAAGTGGGGGCTGAGGCAGAGGCAGGGATAGCT...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000478873.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
3UTR-3UTR CCA 90 bp GAGGGCAGCTCGGATGTATCGAGCAACAGGCAGAAAGTAGACACTGAGGTCGAATTGATGCTGTTTCTGTaGAGACTGAAGACAGTGGCT +
Preference number: 2 (lower is better)
Translates to: EGSSDVSSNRQKVDTEVELMLFL*RLKTVA
Trigger: AGCCACTGTCTTCAGTCTCCACAGAAACAGCATCAA...TTCGACCTCAGTGTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCTGCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCTTGATGCTGTTTCTGTaGAGACTGAAGACAGTGGCT +
Preference number: 2 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGLMLFL*RLKTVA
Trigger: AGCCACTGTCTTCAGTCTCCACAGAAACAGCATCAA...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000479884.6
3UTR-3UTR TCA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGTGCATAAAGAATCTCTaGATTGGGTCAGGGAAATCC +
Preference number: 2 (lower is better)
Translates to: LAVYISGSLETAEPAVPRCIKNL*IGSGKS
Trigger: GGATTTCCCTGACCCAATTCAGAGATTCTTTATGCA...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000478873.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
3UTR-3UTR GCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGATGTCGTCCGCCTCGATaGCATAGTACTCCAGGGACA +
Preference number: 2 (lower is better)
Translates to: SLLHKESLNWVREIHPLRCRPPR*HSTPGT
Trigger: TGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
3UTR-3UTR GCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGCCTCAGCCCCCACTTaGTGTTTACATCTCAGGGTC +
Preference number: 2 (lower is better)
Translates to: SLLHKESLNWVREIHPLRASAPT*CLHLRV
Trigger: GACCCTGAGATGTAAACAGCAAGTGGGGGCTGAGGC...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000478873.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
3UTR-3UTR CAA 90 bp CGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGACTGCCCCATGGATCTaGGGCCTCCGGAGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: RPVSRPSRLSRTWSCRRKTAPWI*GLRRSC
Trigger: GCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGT...CTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp GTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGCCCAGCTGGATCAGCTaGCTCTTGTCCCGGGCTGCG +
Preference number: 3 (lower is better)
Translates to: VSRPSRLSRTWSCRRKPEPSWIS*LLSRAA
Trigger: CGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG...CTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp GTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGTACCAGCACGCGGCCTaGGGGAACACTGAGGGCAGC +
Preference number: 3 (lower is better)
Translates to: VSRPSRLSRTWSCRRKPEYQHAA*GNTEGS
Trigger: GCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGTA...CTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR GCA 72 bp GGTCGTGGGCTGGCACCCCCAGGTAGCTCACACTGCTaGCGTAGAAGTCAGGGCCGCCCTGACAGTAGAGGC +
Preference number: 3 (lower is better)
Translates to: GRGLAPPGSSHC*RRSQGRPDSRG
Trigger: GCCTCTACTGTCAGGGCGGCCCTGACTTCTACGGCAGCAGTGTGAGCTACCTGGGGGTGCCAGCCCACGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494588.2
3UTR-3UTR CAA 90 bp GGACCCACAGCAAGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCCAGCTGGATCAGCTaGCTCTTGTCCCGGGCTGCG +
Preference number: 3 (lower is better)
Translates to: GPTASAAAKPMWAAGREMPSWIS*LLSRAA
Trigger: CGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG...CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp CCCAGGCTGTGCACTTCTCTGACGGGCAGTTCGTGCTGCTGGCTTTCAGCCGCCCCCAGCTGGATCAGCTaGCTCTTGTCCCGGGCTGCG +
Preference number: 3 (lower is better)
Translates to: PRLCTSLTGSSCCWLSAAPSWIS*LLSRAA
Trigger: CGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG...GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR GCA 72 bp GGAGGTCGTGGGCTGGCACCCCCAGGTAGCTCACACTaGTGCCGTAGAAGTCAGGGCCGCCCTGACAGTAGA +
Preference number: 3 (lower is better)
Translates to: GGRGLAPPGSSH*CRRSQGRPDSR
Trigger: TCTACTGTCAGGGCGGCCCTGACTTCTACGGCAGCAGTGTGAGCTACCTGGGGGTGCCAGCCCACGACCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494588.2
3UTR CCA 72 bp GACGGACCCACAGCAAGCGCTGCAGCGAAGCCAATGTaGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCAT +
Preference number: 3 (lower is better)
Translates to: DGPTASAAAKPM*AAGREMPGLPH
Trigger: ATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGTCCGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR CCA 72 bp CGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTaGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATA +
Preference number: 3 (lower is better)
Translates to: RPVSRPSRLSRT*SCRRKPELGQI
Trigger: TATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp CCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCGAGTTAGGGCAGATATaGCGGTGGGCCTGCACCGTC +
Preference number: 3 (lower is better)
Translates to: PDQNRPVSRPSRLSRTWSELGQI*RWACTV
Trigger: GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTC...GCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp GCGGCTTACCCCCATGGCACAGTGTACCAGCACGCGGCCTTGGGGAACACTGAGGAGTTAGGGCAGATATaGCGGTGGGCCTGCACCGTC +
Preference number: 3 (lower is better)
Translates to: AAYPHGTVYQHAALGNTEELGQI*RWACTV
Trigger: GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTC...CTCAGTGTTCCCCAAGGCCGCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp ACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCTGGATCAGCTTGCTCTaGTCCCGGGCTGCGTACGCA +
Preference number: 3 (lower is better)
Translates to: TWSCRRKPELGQILRWACWISLL*SRAAYA
Trigger: TGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCA...GCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp ACAACGTGGGTGATTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACCCCAGCTGGATCAGCTaGCTCTTGTCCCGGGCTGCG +
Preference number: 3 (lower is better)
Translates to: TTWVIPSWISLLLSRAAYPSWIS*LLSRAA
Trigger: CGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG...GTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCACGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp GGACCCACAGCAAGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGGTGTCCACCTGGAACTaGCCTGCAGCGGCATTCACA +
Preference number: 3 (lower is better)
Translates to: GPTASAAAKPMWAAGREMVSTWN*PAAAFT
Trigger: TGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACAC...CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp TGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCACCAGGTCGAAGAAGGGGTaGTCGTCCGCCTCGATGCCA +
Preference number: 3 (lower is better)
Translates to: WSCRRKPELGQILRWACTRSKKG*SSASMP
Trigger: TGGCATCGAGGCGGACGACAACCCCTTCTTCGACCT...GGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp GCAGATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTTCCCGCCCCAGTCGGTaGTCCAGAACCTGGAGCTGC +
Preference number: 3 (lower is better)
Translates to: ADIAVGLHRLDGLYQRHVSRPSR*SRTWSC
Trigger: GCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGA...AACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR TCA 72 bp CCTGTGGGAGTATCTGGCCCAGGCTGTGCACTTCTCTaGCGGGCAGTTCGTGCTGCTGGCTTTCAGCCGCCT +
Preference number: 3 (lower is better)
Translates to: PVGVSGPGCALL*RAVRAAGFQPP
Trigger: AGGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCCTGGGCCAGATACTCCCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR GCA 72 bp GCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTaGAGTGAGTCCATCCTGTGGGAGTATCTGGCCCAG +
Preference number: 3 (lower is better)
Translates to: APWILGLRRSCF*SESILWEYLAQ
Trigger: CTGGGCCAGATACTCCCACAGGATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR GCA 72 bp GTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTaGCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGG +
Preference number: 3 (lower is better)
Translates to: VSRPSRLSRTWS*RRKPELGQILR
Trigger: CCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR CCA 72 bp GCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCTTCTGCAGTGAGTCCA +
Preference number: 3 (lower is better)
Translates to: AGREMPGLPHGS*ASGGPASAVSP
Trigger: TGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR CCA 72 bp AGAGGCTGGGCCAGACCTCATCGATATGGTTCAGTGTaGCAGCCTGACGGACCCACAGCAAGCGCTGCAGCG +
Preference number: 3 (lower is better)
Translates to: RGWARPHRYGSV*QPDGPTASAAA
Trigger: CGCTGCAGCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCAGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR CCA 72 bp TGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTaGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTC +
Preference number: 3 (lower is better)
Translates to: CRRKPELGQILR*ACTVWMASTSV
Trigger: GACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp ATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCAACTGCCCCATGGATCTaGGGCCTCCGGAGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: ILRWACTVWMASTSVMFSTAPWI*GLRRSC
Trigger: GCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGT...TGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp CGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCAGGTCGAAGAAGGGGTaGTCGTCCGCCTCGATGCCA +
Preference number: 3 (lower is better)
Translates to: RWACTVWMASTSVMFSQIRSKKG*SSASMP
Trigger: TGGCATCGAGGCGGACGACAACCCCTTCTTCGACCT...GATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp GCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGTACCAGCACGCGGCCTaGGGGAACACTGAGGGCAGC +
Preference number: 3 (lower is better)
Translates to: ACTVWMASTSVMFSQIMRYQHAA*GNTEGS
Trigger: GCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGTA...CCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR TCA 72 bp TCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTaGGTTAGGGCAGATATTGCGGTGGGCCTGCACCGT +
Preference number: 3 (lower is better)
Translates to: SVVQNLELPEEA*VRADIAVGLHR
Trigger: ACGGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR GCA 72 bp CCCAGGCTGTGCACTTCTCTGACGGGCAGTTCGTGCTaGTGGCTTTCAGCCGCCTGTCTCCGCACACTTGAT +
Preference number: 3 (lower is better)
Translates to: PRLCTSLTGSSC*WLSAACLRTLD
Trigger: ATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp GTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACTGCCCCATGGATCTaGGGCCTCCGGAGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: VWMASTSVMFSQIMRKARTAPWI*GLRRSC
Trigger: GCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGT...CCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp GGCTGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGTGTCCACCTGGAACTaGCCTGCAGCGGCATTCACA +
Preference number: 3 (lower is better)
Translates to: GWARPHRYGSVWQPDGPTVSTWN*PAAAFT
Trigger: TGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACAC...TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp GATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCAGGTCGAAGAAGGGGTaGTCGTCCGCCTCGATGCCA +
Preference number: 3 (lower is better)
Translates to: DIAVGLHRLDGLYQRHVLRSKKG*SSASMP
Trigger: TGGCATCGAGGCGGACGACAACCCCTTCTTCGACCT...GAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp CCCAGGCTGTGCACTTCTCTGACGGGCAGTTCGTGCTGCTGGCTTTCAGCCGCCCCTGTCTCCGCACACTaGATGCTGTTTCTGTGGAGA +
Preference number: 3 (lower is better)
Translates to: PRLCTSLTGSSCCWLSAAPVSAH*MLFLWR
Trigger: TCTCCACAGAAACAGCATCAAGTGTGCGGAGACAGG...GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR TCA 72 bp GGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTaGCGGACCCACAGCAAGCGCTGCAGCGAAGCCAAT +
Preference number: 3 (lower is better)
Translates to: GQTSSIWFSVAA*RTHSKRCSEAN
Trigger: ATTGGCTTCGCTGCAGCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR TCA 72 bp CCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTaGTTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGG +
Preference number: 3 (lower is better)
Translates to: PGTCLQRHSQRG*FPAGSACSCPG
Trigger: CCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR GCA 72 bp GTGAGTCCATCCTGTGGGAGTATCTGGCCCAGGCTGTaGACTTCTCTGACGGGCAGTTCGTGCTGCTGGCTT +
Preference number: 3 (lower is better)
Translates to: VSPSCGSIWPRL*TSLTGSSCCWL
Trigger: AAGCCAGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCCTGGGCCAGATACTCCCACAGGATGGACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR GCA 72 bp TGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATCCTGTGGGAGTATCTG +
Preference number: 3 (lower is better)
Translates to: WTAPWILGLRRS*FCSESILWEYL
Trigger: CAGATACTCCCACAGGATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR CCA 72 bp AGGCTGTGCACTTCTCTGACGGGCAGTTCGTGCTGCTaGCTTTCAGCCGCCTGTCTCCGCACACTTGATGCT +
Preference number: 3 (lower is better)
Translates to: RLCTSLTGSSCC*LSAACLRTLDA
Trigger: AGCATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTACTGCCCCATGGATCTaGGGCCTCCGGAGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: ESLNWVREIHPLRGHHPATAPWI*GLRRSC
Trigger: GCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGT...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
3UTR-3UTR CAA 90 bp GGTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTAGCTCCCCAGGCGTGTaGAGGGCACGGTGGATGAAG +
Preference number: 3 (lower is better)
Translates to: GCRPPRCHSTPGTFHGRISSPGV*RARWMK
Trigger: CTTCATCCACCGTGCCCTCAACACGCCTGGGGAGCT...AATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494588.2
3UTR GCA 72 bp AGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTaGACCGTCTGGATGGCCTCTACCAGCGTCATGTTC +
Preference number: 3 (lower is better)
Translates to: RKPELGQILRWA*TVWMASTSVMF
Trigger: GAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR CCA 72 bp GTAGGCACTGATGTCAAAATCAGGGAGGTCGTGGGCTaGCACCCCCAGGTAGCTCACACTGCTGCCGTAGAA +
Preference number: 3 (lower is better)
Translates to: VGTDVKIREVVG*HPQVAHTAAVE
Trigger: TTCTACGGCAGCAGTGTGAGCTACCTGGGGGTGCCAGCCCACGACCTCCCTGATTTTGACATCAGTGCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494588.2
3UTR-3UTR CAA 90 bp TGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGAGGTCGAAGAAGGGGTaGTCGTCCGCCTCGATGCCA +
Preference number: 3 (lower is better)
Translates to: CRPPRCHSTPGTFHGRIWRSKKG*SSASMP
Trigger: TGGCATCGAGGCGGACGACAACCCCTTCTTCGACCT...CCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR CCA 72 bp GAGTTAGGGCAGATATTGCGGTGGGCCTGCACCGTCTaGATGGCCTCTACCAGCGTCATGTTCTCACAGATC +
Preference number: 3 (lower is better)
Translates to: ELGQILRWACTV*MASTSVMFSQI
Trigger: GATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATCTGCCCTAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp GGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAAGTGTCCACCTGGAACTaGCCTGCAGCGGCATTCACA +
Preference number: 3 (lower is better)
Translates to: GRIWHLCPPGTCLQRHSQVSTWN*PAAAFT
Trigger: TGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACAC...TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR TCA 72 bp CTCGGATGTATCGAGCAACAGGCAGAAAGTAGACACTaGGGTCGAAGAAGGGGTTGTCGTCCGCCTCGATGC +
Preference number: 3 (lower is better)
Translates to: LGCIEQQAESRH*GRRRGCRPPRC
Trigger: GCATCGAGGCGGACGACAACCCCTTCTTCGACCTCAGTGTCTACTTTCTGCCTGTTGCTCGATACATCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR CCA 72 bp TGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTaGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGG +
Preference number: 3 (lower is better)
Translates to: CHSTPGTFHGRI*HLCPPGTCLQR
Trigger: CCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
3UTR-3UTR CAA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGTGCCTCAGCCCCCACTaGCTGTTTACATCTCAGGGT +
Preference number: 3 (lower is better)
Translates to: LAVYISGSLETAEPAVPRCLSPH*LFTSQG
Trigger: ACCCTGAGATGTAAACAGCAAGTGGGGGCTGAGGCA...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000478873.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
3UTR-3UTR CAA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGATGCCTCAGCCCCCACTaGCTGTTTACATCTCAGGGT +
Preference number: 3 (lower is better)
Translates to: SLLHKESLNWVREIHPLRCLSPH*LFTSQG
Trigger: ACCCTGAGATGTAAACAGCAAGTGGGGGCTGAGGCA...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000478873.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
3UTR-3UTR CAA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGGACTGAACTCACTTTaGCATAAAGAATCTCTGAAT +
Preference number: 3 (lower is better)
Translates to: LAVYISGSLETAEPAVPRGLNSL*HKESLN
Trigger: ATTCAGAGATTCTTTATGCAAAAGTGAGTTCAGTCC...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000478873.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GCCGACCCCACGCTGGGCTTCCACCATCTTCTGTGTGTCCGCCTGGGCCAGAGCCTGGCCCCTCAGCTCTaGCCGGCACCCCGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: ADPTLGFHHLLCVRLGQSLAPQL*PAPRSC
Trigger: GCAACTGCGGGGTGCCGGCCAGAGCTGAGGGGCCAG...GCTCTGGCCCAGGCGGACACACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372702.7
CDS-3UTR TCA 90 bp CCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGGTGCTGCCTCACGGTaGTCACCGCCTGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: PARSEPPRLPPQSVVQNLGAASR*SPPGAG
Trigger: CCCTGCGCCAGGCGGTGATCACCGTGAGGCAGCACC...CAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372702.7
CDS-3UTR GCA 90 bp CCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCGGGATCCTGGCTGCCTaGCAGATCAGAACCGCCCCG +
Preference number: 4 (lower is better)
Translates to: PRLPPQSVVQNLELPEEAGILAA*QIRTAP
Trigger: CGGGGCGGTTCTGATCTGGCAGGCAGCCAGGATCCC...GGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
CDS-3UTR GCA 90 bp ACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAGGGATCCTGGCTGCCTaGCAGATCAGAACCGCCCCG +
Preference number: 4 (lower is better)
Translates to: TAPSPAPVGCPEPGAAGGGILAA*QIRTAP
Trigger: CGGGGCGGTTCTGATCTGGCAGGCAGCCAGGATCCC...TCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
CDS-3UTR GCA 90 bp CGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGGCCCGCCCACCCCTCTaGCTCTGTGGTCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: RPVSRPSRLSRTWSCRRKARPPL*LCGHSS
Trigger: AGAGGAGTGACCACAGAGGCAGAGGGGTGGGCGGGC...CTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCGAGAGGTCTCAGCCATaGGCCAGCCCGCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: PDQNRPVSRPSRLSRTWSERSQP*ASPPTP
Trigger: AGGGGTGGGCGGGCTGGCCCATGGCTGAGACCTCTC...GCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCCGACCCCACGCTGGGCTTCCACCATCTTCTGTGTGTCCGCCTGGGCCAGAGCAGGGAGGTCGTGGGCTaGCACCCCCAGGTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: ADPTLGFHHLLCVRLGQSREVVG*HPQVAH
Trigger: GTGAGCTACCTGGGGGTGCCAGCCCACGACCTCCCT...GCTCTGGCCCAGGCGGACACACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000494588.2
CDS-3UTR CCA 90 bp CCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTTCTGTGTGTCCGCCTaGGCCAGAGCCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PRLPPQSVVQNLELPEEAFCVSA*ARASSS
Trigger: GCTGCTGGAGGCTCTGGCCCAGGCGGACACACAGAA...GGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp CCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCGGCCTTGGGGAACACTaGGGGCAGCTCGGATGTATC +
Preference number: 4 (lower is better)
Translates to: PRLPPQSVVQNLELPEEAGLGEH*GQLGCI
Trigger: GATACATCCGAGCTGCCCTCAGTGTTCCCCAAGGCC...GGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp ACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGACGGCTGGTAGGGAGATaGCTGGACTGCCCCATGGAT +
Preference number: 4 (lower is better)
Translates to: TAPSPAPVGCPEPGAAGGRLVGR*LDCPMD
Trigger: ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCG...TCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCACCCACAGCAAGCGCTaGAGCGAAGCCAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: PRLPPQSVVQNLELPEEATHSKR*SEANVG
Trigger: GCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGT...GGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCGGCTTACCCCCATGGCACAGTGTACCAGCACGCGGCCTTGGGGAACACTGAGGAGAGGTCTCAGCCATaGGCCAGCCCGCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: AAYPHGTVYQHAALGNTEERSQP*ASPPTP
Trigger: AGGGGTGGGCGGGCTGGCCCATGGCTGAGACCTCTC...CTCAGTGTTCCCCAAGGCCGCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGAGAGGTCTCAGCCATaGGCCAGCCCGCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: AAAKPMWAAGREMPGLPHERSQP*ASPPTP
Trigger: AGGGGTGGGCGGGCTGGCCCATGGCTGAGACCTCTC...ATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp AGGCGCCAGGAGGAGCCAGATGGAGTAGCAGGCTCTAGGGCCGACCCCACGCTGTGGGCCTGCACCGTCTaGATGGCCTCTACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: RRQEEPDGVAGSRADPTLWACTV*MASTSV
Trigger: GACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCA...CAGCGTGGGGTCGGCCCTAGAGCCTGCTACTCCATCTGGCTCCTCCTGGCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000494588.2
3UTR CAA 72 bp CCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTaGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PDQNRPVSRPSR*SRTWSCRRKPE
Trigger: CTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp TGCCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCCTGACGGGCAGTTCGTaGTGCTGGCTTTCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: CLPDQNRPVSRPSRLSRTLTGSS*CWLSAA
Trigger: GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAG...GGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp ACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGACGGAGGTCCTGCTTCTaGAGTGAGTCCATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TAPSPAPVGCPEPGAAGGRRSCF*SESILW
Trigger: CCACAGGATGGACTCACTGCAGAAGCAGGACCTCCG...TCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAATATTGCGGTGGGCCTaGACCGTCTGGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PPRLPPQSVVQNLELPEEILRWA*TVWMAS
Trigger: AGAGGCCATCCAGACGGTGCAGGCCCACCGCAATAT...TTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGGGGATCCTGGCTGCCTaGCAGATCAGAACCGCCCCG +
Preference number: 4 (lower is better)
Translates to: GRCLDCPMDLGPPEVLLLGILAA*QIRTAP
Trigger: CGGGGCGGTTCTGATCTGGCAGGCAGCCAGGATCCC...CAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
CDS-3UTR GCA 90 bp CAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCCGGCACCCCGCAGTTaGTGGTCCAGCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: QRSQCGRLVGRCLDCPMDPAPRS*WSSLQS
Trigger: GCTCTGCAGGCTGGACCAGCAACTGCGGGGTGCCGG...ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372702.7
CDS-3UTR CCA 90 bp GGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGCAGCGAAGCCAATGTaGGCGGCTGGTAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: GRLVGRCLDCPMDLGPPEAAKPM*AAGREM
Trigger: CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGC...CTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp AGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCTGGGCCTGCACCGTCTaGATGGCCTCTACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: SAAAKPMWAAGREMPGLPWACTV*MASTSV
Trigger: GACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCA...GGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCAGTGAGTCCAGGGCCAGGCTGGTaGGGTTGGGCCAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PGLPHGSWASGGPASAVSPGPGW*GWAKGQ
Trigger: CTGACCCTTGGCCCAACCCCACCAGCCTGGCCCTGG...ACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
CDS-3UTR TCA 90 bp CGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGGTCCTGCTTCTGCAGTaGGTCCATCCTGTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: RPVSRPSRLSRTWSCRRKVLLLQ*VHPVGV
Trigger: TACTCCCACAGGATGGACTCACTGCAGAAGCAGGAC...CTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CTGACGGACCCACAGCAAGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGGCAAGAAGACTTCCCTaGCCGCAGGAGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LTDPQQALQRSQCGRLVGARRLP*PQELLQ
Trigger: CTGGAGGAGCTCCTGCGGGCAGGGAAGTCTTCTTGC...CCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGTCCGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCCGACCCCACGCTGGGCTTCCACCATCTTCTGTGTGTCCGCCTGGGCCAGAGCCTTCGTCCACACGGCTaGAAGAAGACTTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ADPTLGFHHLLCVRLGQSLRPHG*KKTSLP
Trigger: GGGCAGGGAAGTCTTCTTGCAGCCGTGTGGACGAAG...GCTCTGGCCCAGGCGGACACACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000494588.2
CDS-3UTR GCA 90 bp GGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCTGACGGGCAGTTCGTaGTGCTGGCTTTCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: GRCLDCPMDLGPPEVLLLLTGSS*CWLSAA
Trigger: GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAG...CAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp TGCCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCCGGCTGGTAGGGAGATaGCTGGACTGCCCCATGGAT +
Preference number: 4 (lower is better)
Translates to: CLPDQNRPVSRPSRLSRTRLVGR*LDCPMD
Trigger: ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCG...GGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CTGCCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCCAGCTGGATCAGCTTaGTCTTGTCCCGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: LPARSEPPRLPPQSVVQNPAGSA*SCPGLR
Trigger: ACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGG...GTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGGGAAGACCCATCGGTaGTGCCTCACGGTGATCACC +
Preference number: 4 (lower is better)
Translates to: PARSEPPRLPPQSVVQNLGKTHR*CLTVIT
Trigger: GGTGATCACCGTGAGGCAGCACCGATGGGTCTTCCC...CAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372702.7
CDS-3UTR GCA 90 bp GGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGCACCAGCAGGATCAGTaGCAGGGTGGCAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GRLVGRCLDCPMDLGPPEHQQDQ*QGGKVA
Trigger: TGCCACTTTGCCACCCTGGCACTGATCCTGCTGGTG...CTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp TGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGCAGTTCGTGCTGCTaGCTTTCAGCCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: WAAGREMPGLPHGSWASGGSSCC*LSAACL
Trigger: GAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCC...TCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTGCCTGGACTGCCCCATaGATCTTGGGCCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: AKPMWAAGREMPGLPHGSAWTAP*ILGLRR
Trigger: CCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGC...AGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTGCCTGGACTGCCCCATaGATCTTGGGCCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: QCGRLVGRCLDCPMDLGPAWTAP*ILGLRR
Trigger: CCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGC...AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CACCCCCAGGTAGCTCACACTGCTGCCGTAGAAGTCAGGGCCGCCCTGACAGTAGCCTGGACTGCCCCATaGATCTTGGGCCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: HPQVAHTAAVEVRAALTVAWTAP*ILGLRR
Trigger: CCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGC...TACTGTCAGGGCGGCCCTGACTTCTACGGCAGCAGTGTGAGCTACCTGGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494588.2
CDS-3UTR CCA 90 bp CTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGACCAGCACGCGGCCTTaGGGAACACTGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LVGRCLDCPMDLGPPEVLTSTRP*GTLRAA
Trigger: AGCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGT...CAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCAGCGGCTTACCCCCATaGCACAGTGTACCAGCACGC +
Preference number: 4 (lower is better)
Translates to: PDQNRPVSRPSRLSRTWSSGLPP*HSVPAR
Trigger: GCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGCT...GCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp AGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCAGCGGCTTACCCCCATaGCACAGTGTACCAGCACGC +
Preference number: 4 (lower is better)
Translates to: SAAAKPMWAAGREMPGLPSGLPP*HSVPAR
Trigger: GCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGCT...GGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCGGTTGTCCAGAACCTaGAGCTGCCGGAGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: AAGREMPGLPHGSWASGGRLSRT*SCRRKP
Trigger: AGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCG...ACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCAGGAAGAGGCTGGAGGGAGGTCGTGGGCTaGCACCCCCAGGTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: GSACSCPGLRTHLPGRGWREVVG*HPQVAH
Trigger: GTGAGCTACCTGGGGGTGCCAGCCCACGACCTCCCT...CCAGCCTCTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGCAGGAAGCCTCGGTTaGGGAAGACCCATCGGTGCT +
Preference number: 4 (lower is better)
Translates to: PARSEPPRLPPQSVVQNLAGSLG*GRPIGA
Trigger: AGCACCGATGGGTCTTCCCCAACCGAGGCTTCCTGC...CAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372702.7
CDS-3UTR CCA 90 bp CCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGAGTGGCAGAGCCCCATaGCAGGGAGTAAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: PARSEPPRLPPQSVVQNLSGRAP*QGVRTS
Trigger: GCTGGTCCTTACTCCCTGCCATGGGGCTCTGCCACT...CAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGTTCTGTGTGTCCGCCTaGGCCAGAGCCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LVGRCLDCPMDLGPPEVLFCVSA*ARASSS
Trigger: GCTGCTGGAGGCTCTGGCCCAGGCGGACACACAGAA...CAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTTCTGTGTGTCCGCCTaGGCCAGAGCCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PMWAAGREMPGLPHGSWAFCVSA*ARASSS
Trigger: GCTGCTGGAGGCTCTGGCCCAGGCGGACACACAGAA...GGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp CTGCCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGCCGGAGGAAGCCTaGGTTAGGGCAGATATTGCG +
Preference number: 4 (lower is better)
Translates to: LPARSEPPRLPPQSVVQNLPEEA*VRADIA
Trigger: CGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAG...GTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGGCAAGAAGACTTCCCTaGCCGCAGGAGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVGRCLDCPMDLGPPEVLARRLP*PQELLQ
Trigger: CTGGAGGAGCTCCTGCGGGCAGGGAAGTCTTCTTGC...CAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp TGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGACTTCGTCCACACGGCTaGAAGAAGACTTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: WAAGREMPGLPHGSWASGLRPHG*KKTSLP
Trigger: GGGCAGGGAAGTCTTCTTGCAGCCGTGTGGACGAAG...TCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATACGGGCAGTTCGTGCTaGTGGCTTTCAGCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: AAAKPMWAAGREMPGLPHTGSSC*WLSAAC
Trigger: ACAGGCGGCTGAAAGCCAGCAGCACGAACTGCCCGT...ATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp AGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCACCGTCCTGACGGGCAGTTCGTaGTGCTGGCTTTCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: SCRRKPELGQILRWACTVLTGSS*CWLSAA
Trigger: GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAG...GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp ATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: MWAAGREMPGLPHGSWASGLRRS*FCSESI
Trigger: GATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCC...GGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: LVGRCLDCPMDLGPPEVLGLRRS*FCSESI
Trigger: GATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCC...CAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp ATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGGAGATGCCTGGACTaGCCCATGGATCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: MWAAGREMPGLPHGSWASGRCLD*PMDLGP
Trigger: AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC...GGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGGAGATGCCTGGACTaGCCCATGGATCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AAAKPMWAAGREMPGLPHGRCLD*PMDLGP
Trigger: AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC...ATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CCCAGGCTGTGCACTTCTCTGACGGGCAGTTCGTGCTGCTGGCTTTCAGCCGCCGGGAGATGCCTGGACTaGCCCATGGATCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PRLCTSLTGSSCCWLSAAGRCLD*PMDLGP
Trigger: AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC...GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCGGCTGGTAGGGAGATaGCTGGACTGCCCCATGGAT +
Preference number: 4 (lower is better)
Translates to: GRCLDCPMDLGPPEVLLLRLVGR*LDCPMD
Trigger: ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCG...CAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCCAGCTGGATCAGCTTaGTCTTGTCCCGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: RPSRLSRTWSCRRKPELGPAGSA*SCPGLR
Trigger: ACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGG...CCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCGGCTTACCCCCATGGCACAGTGTACCAGCACGCGGCCTTGGGGAACACTGAGGTCAGGGATCCTGGCTaGCTGCCAGATCAGAACCGC +
Preference number: 4 (lower is better)
Translates to: AAYPHGTVYQHAALGNTEVRDPG*LPDQNR
Trigger: GCGGTTCTGATCTGGCAGGCAGCCAGGATCCCTGAC...CTCAGTGTTCCCCAAGGCCGCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
CDS-3UTR GCA 90 bp GCACCCCCAGGTAGCTCACACTGCTGCCGTAGAAGTCAGGGCCGCCCTGACAGTGGTAGCTCACACTGCTaGCGTAGAAGTCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: APPGSSHCCRRSQGRPDSGSSHC*RRSQGR
Trigger: GCGGCCCTGACTTCTACGGCAGCAGTGTGAGCTACC...ACTGTCAGGGCGGCCCTGACTTCTACGGCAGCAGTGTGAGCTACCTGGGGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494588.2
CDS-3UTR GCA 90 bp GCTCTAGGGCCGACCCCACGCTGGGCTTCCACCATCTTCTGTGTGTCCGCCTGGCACCAGCAGGATCAGTaGCAGGGTGGCAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: ALGPTPRWASTIFCVSAWHQQDQ*QGGKVA
Trigger: TGCCACTTTGCCACCCTGGCACTGATCCTGCTGGTG...CCAGGCGGACACACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGCCCTAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000494588.2
CDS-3UTR GCA 90 bp AGTGCCAGGGTGGCAAAGTGGCAGAGCCCCATGGCAGGGAGTAAGGACCAGCTCCTCAAAGCGGTTGTTTaGCGTGGCCCTGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SARVAKWQSPMAGSKDQLLKAVV*RGPGEG
Trigger: GCCCTCCCCAGGGCCACGGCAAACAACCGCTTTGAG...GAGCTGGTCCTTACTCCCTGCCATGGGGCTCTGCCACTTTGCCACCCTGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494588.2
CDS-3UTR CCA 90 bp CTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGGGCAGTTCGTGCTGCTaGCTTTCAGCCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LVGRCLDCPMDLGPPEVLGSSCC*LSAACL
Trigger: GAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCC...CAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCCGACCCCACGCTGGGCTTCCACCATCTTCTGTGTGTCCGCCTGGGCCAGAGCAGTGAGTCCATCCTGTaGGAGTATCTGGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: ADPTLGFHHLLCVRLGQSSESIL*EYLAQA
Trigger: AGCCTGGGCCAGATACTCCCACAGGATGGACTCACT...GCTCTGGCCCAGGCGGACACACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000494588.2
CDS-3UTR CCA 90 bp CCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCAGGAAGCTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSWISLLLSRAAYASPRKLPHGS*ASGGPA
Trigger: AGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG...CTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp AGTGCCAGGGTGGCAAAGTGGCAGAGCCCCATGGCAGGGAGTAAGGACCAGCTCCTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SARVAKWQSPMAGSKDQLLPHGS*ASGGPA
Trigger: AGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG...GAGCTGGTCCTTACTCCCTGCCATGGGGCTCTGCCACTTTGCCACCCTGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000494588.2
CDS-3UTR CCA 90 bp GTGATTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCGCCTGGACTGCCCCATaGATCTTGGGCCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: VIPSWISLLLSRAAYASPAWTAP*ILGLRR
Trigger: CCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGC...GGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGCAGCGAAGCCAATGTaGGCGGCTGGTAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: AAAKPMWAAGREMPGLPHAAKPM*AAGREM
Trigger: CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGC...ATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp ATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCAGCGGCTTACCCCCATaGCACAGTGTACCAGCACGC +
Preference number: 4 (lower is better)
Translates to: MWAAGREMPGLPHGSWASSGLPP*HSVPAR
Trigger: GCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGCT...GGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp AGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCCTGCACCGTCTGGATaGCCTCTACCAGCGTCATGT +
Preference number: 4 (lower is better)
Translates to: SAAAKPMWAAGREMPGLPPAPSG*PLPASC
Trigger: ACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGG...GGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp TGCCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCCCTGCACCGTCTGGATaGCCTCTACCAGCGTCATGT +
Preference number: 4 (lower is better)
Translates to: CLPDQNRPVSRPSRLSRTPAPSG*PLPASC
Trigger: ACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGG...GGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp ACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCTGGGCCTGCACCGTCTaGATGGCCTCTACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: TWSCRRKPELGQILRWACWACTV*MASTSV
Trigger: GACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCA...GCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGAGGGCAGATATTGCGGTaGGCCTGCACCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: AAKPMWAAGREMPGLPHGGQILR*ACTVWM
Trigger: CATCCAGACGGTGCAGGCCCACCGCAATATCTGCCC...TCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCGGCTTACCCCCATGGCACAGTGTACCAGCACGCGGCCTTGGGGAACACTGAGGGGCAGATATTGCGGTaGGCCTGCACCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: AAYPHGTVYQHAALGNTEGQILR*ACTVWM
Trigger: CATCCAGACGGTGCAGGCCCACCGCAATATCTGCCC...CTCAGTGTTCCCCAAGGCCGCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGGGGCAGATATTGCGGTaGGCCTGCACCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: LVGRCLDCPMDLGPPEVLGQILR*ACTVWM
Trigger: CATCCAGACGGTGCAGGCCCACCGCAATATCTGCCC...CAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CAAGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCGGTTGTCCAGAACCTaGAGCTGCCGGAGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: QALQRSQCGRLVGRCLDCRLSRT*SCRRKP
Trigger: AGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCG...GCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAAGGGTCAGGGATCCTaGCTGCCTGCCAGATCAGAA +
Preference number: 4 (lower is better)
Translates to: PSPAPVGCPEPGAAGGSLKGQGS*LPARSE
Trigger: TTCTGATCTGGCAGGCAGCCAGGATCCCTGACCCTT...CAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
CDS-3UTR TCA 90 bp CAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTGGCCTTGGGGAACACTaGGGGCAGCTCGGATGTATC +
Preference number: 4 (lower is better)
Translates to: QCGRLVGRCLDCPMDLGPGLGEH*GQLGCI
Trigger: GATACATCCGAGCTGCCCTCAGTGTTCCCCAAGGCC...AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp GCGGCTTACCCCCATGGCACAGTGTACCAGCACGCGGCCTTGGGGAACACTGAGCTGCCGGAGGAAGCCTaGGTTAGGGCAGATATTGCG +
Preference number: 4 (lower is better)
Translates to: AAYPHGTVYQHAALGNTELPEEA*VRADIA
Trigger: CGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAG...CTCAGTGTTCCCCAAGGCCGCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp ACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCCGTTCAGCACGTGGGTaGTGCCCAGCTTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: TWSCRRKPELGQILRWACRSARG*CPASTA
Trigger: AGCTGTGGAAGCTGGGCATCACCCACGTGCTGAACG...GCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp AGGCGCCAGGAGGAGCCAGATGGAGTAGCAGGCTCTAGGGCCGACCCCACGCTGTGTTTCTGTGGAGACTaGAGACAGTGGCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RRQEEPDGVAGSRADPTLCFCGD*RQWLRG
Trigger: CCCTCTCAGCCACTGTCTTCAGTCTCCACAGAAACA...CAGCGTGGGGTCGGCCCTAGAGCCTGCTACTCCATCTGGCTCCTCCTGGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000494588.2
CDS-3UTR GCA 90 bp TGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCACCACGGGCAGTTCGTGCTaGTGGCTTTCAGCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: WSCRRKPELGQILRWACTTGSSC*WLSAAC
Trigger: ACAGGCGGCTGAAAGCCAGCAGCACGAACTGCCCGT...GGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GGCTGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACACTGACGGGCAGTTCGTaGTGCTGGCTTTCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: GWARPHRYGSVWQPDGPTLTGSS*CWLSAA
Trigger: GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAG...TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CCCAGGCTGTGCACTTCTCTGACGGGCAGTTCGTGCTGCTGGCTTTCAGCCGCCATCTGGCCCAGGCTGTaGACTTCTCTGACGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PRLCTSLTGSSCCWLSAAIWPRL*TSLTGS
Trigger: ACTGCCCGTCAGAGAAGTGCACAGCCTGGGCCAGAT...GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCGGCTTACCCCCATGGCACAGTGTACCAGCACGCGGCCTTGGGGAACACTGAGCGGAGGTCCTGCTTCTaGAGTGAGTCCATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: AAYPHGTVYQHAALGNTERRSCF*SESILW
Trigger: CCACAGGATGGACTCACTGCAGAAGCAGGACCTCCG...CTCAGTGTTCCCCAAGGCCGCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp ATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCCGGAGGTCCTGCTTCTaGAGTGAGTCCATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: MWAAGREMPGLPHGSWASRRSCF*SESILW
Trigger: CCACAGGATGGACTCACTGCAGAAGCAGGACCTCCG...GGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCAGTGAGTCCATCCGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: LPHGSWASGGPASAVSPSGLRRS*FCSESI
Trigger: GATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCC...GGATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp AGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCAGCCAGCTGGATCAGCTTaGTCTTGTCCCGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: RCLDCPMDLGPPEVLLLQPAGSA*SCPGLR
Trigger: ACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGG...CTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTTCCAGAACCTGGAGCTaGCGGAGGAAGCCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: AAGREMPGLPHGSWASGGSRTWS*RRKPEL
Trigger: TAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGA...ACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp AGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCAGGTCAGGGATCCTGGCTaGCTGCCAGATCAGAACCGC +
Preference number: 4 (lower is better)
Translates to: RCLDCPMDLGPPEVLLLQVRDPG*LPDQNR
Trigger: GCGGTTCTGATCTGGCAGGCAGCCAGGATCCCTGAC...CTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
CDS-3UTR CCA 90 bp ATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCAGAGAGGTCTCAGCCATaGGCCAGCCCGCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: ILRWACTVWMASTSVMFSERSQP*ASPPTP
Trigger: AGGGGTGGGCGGGCTGGCCCATGGCTGAGACCTCTC...TGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CTGACGGACCCACAGCAAGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGTGAGTCCATCCTGTaGGAGTATCTGGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LTDPQQALQRSQCGRLVGSESIL*EYLAQA
Trigger: AGCCTGGGCCAGATACTCCCACAGGATGGACTCACT...CCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGTCCGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp TGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAAGTGAGTCCATCCTGTaGGAGTATCTGGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: WAAGREMPGLPHGSWASGSESIL*EYLAQA
Trigger: AGCCTGGGCCAGATACTCCCACAGGATGGACTCACT...TCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCCTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RWACTVWMASTSVMFSQILPHGS*ASGGPA
Trigger: AGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG...GATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp TGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAGCCTGGACTGCCCCATaGATCTTGGGCCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: WARPHRYGSVWQPDGPTAAWTAP*ILGLRR
Trigger: CCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGC...TGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCGATATGGTTCAGTGTaGCAGCCTGACGGACCCACA +
Preference number: 4 (lower is better)
Translates to: AAGREMPGLPHGSWASGGRYGSV*QPDGPT
Trigger: TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCG...ACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCCTCCCAGGAAGAGGCTaGGCCAGACCTCATCGATAT +
Preference number: 4 (lower is better)
Translates to: PDQNRPVSRPSRLSRTWSLPGRG*ARPHRY
Trigger: ATATCGATGAGGTCTGGCCCAGCCTCTTCCTGGGAG...GCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCAGGAAGAGGCTGGAGCGGCTTACCCCCATaGCACAGTGTACCAGCACGC +
Preference number: 4 (lower is better)
Translates to: GSACSCPGLRTHLPGRGWSGLPP*HSVPAR
Trigger: GCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGCT...CCAGCCTCTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp ATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCCCTGCACCGTCTGGATaGCCTCTACCAGCGTCATGT +
Preference number: 4 (lower is better)
Translates to: MWAAGREMPGLPHGSWASPAPSG*PLPASC
Trigger: ACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGG...GGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCCTGCACCGTCTGGATaGCCTCTACCAGCGTCATGT +
Preference number: 4 (lower is better)
Translates to: RPSRLSRTWSCRRKPELGPAPSG*PLPASC
Trigger: ACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGG...CCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp AGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCACCGTCCGGTTGTCCAGAACCTaGAGCTGCCGGAGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SCRRKPELGQILRWACTVRLSRT*SCRRKP
Trigger: AGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCG...GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp TGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAAAGGGTCAGGGATCCTaGCTGCCTGCCAGATCAGAA +
Preference number: 4 (lower is better)
Translates to: WAAGREMPGLPHGSWASGKGQGS*LPARSE
Trigger: TTCTGATCTGGCAGGCAGCCAGGATCCCTGACCCTT...TCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
CDS-3UTR CCA 90 bp ATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACCAGGGCCAGGCTGGTaGGGTTGGGCCAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ILRWACTVWMASTSVMFSPGPGW*GWAKGQ
Trigger: CTGACCCTTGGCCCAACCCCACCAGCCTGGCCCTGG...TGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
CDS-3UTR CCA 90 bp GACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAAGCGCTGAGGGAGGTCGTGGGCTaGCACCCCCAGGTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: DLIDMVQCGSLTDPQQALREVVG*HPQVAH
Trigger: GTGAGCTACCTGGGGGTGCCAGCCCACGACCTCCCT...CAGCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAAGCACCCCGCAGTTGCTaGTCCAGCCTGCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPDLIDMVQCGSLTDPQQAPRSC*SSLQSW
Trigger: CCAGCTCTGCAGGCTGGACCAGCAACTGCGGGGTGC...TTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372702.7
CDS-3UTR CCA 90 bp GTAGCAGGCTCTAGGGCCGACCCCACGCTGGGCTTCCACCATCTTCTGTGTGTCAGTGGCAGAGCCCCATaGCAGGGAGTAAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: VAGSRADPTLGFHHLLCVSGRAP*QGVRTS
Trigger: GCTGGTCCTTACTCCCTGCCATGGGGCTCTGCCACT...GACACACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGCCCTAGAGCCTGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000494588.2
CDS-3UTR CCA 90 bp ACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCAGTGGCAGAGCCCCATaGCAGGGAGTAAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: TWSCRRKPELGQILRWACSGRAP*QGVRTS
Trigger: GCTGGTCCTTACTCCCTGCCATGGGGCTCTGCCACT...GCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GGCAGTTCGTGCTGCTGGCTTTCAGCCGCCTGTCTCCGCACACTTGATGCTGTTGCCAGGGTGGCAAAGTaGCAGAGCCCCATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSSCCWLSAACLRTLDAVARVAK*QSPMAG
Trigger: CCCTGCCATGGGGCTCTGCCACTTTGCCACCCTGGC...AACAGCATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCTGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGGGGCCGACCCCACGCTaGGCTTCCACCATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: AGPDLIDMVQCGSLTDPQGPTPR*ASTIFC
Trigger: ACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGCCC...CTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGGGACCCTGGGGCATaGCCTGGGGCCGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRARDPGA*PGAGNG
Trigger: CCCATTCCCGGCCCCAGGCCATGCCCCAGGGTCCCT...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605915.5
3UTR CAA 72 bp TGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATaGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACC +
Preference number: 4 (lower is better)
Translates to: WSCRRKPELGQI*RWACTVWMAST
Trigger: GGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp CTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGGTCCTGCTTCTGCAGTaGGTCCATCCTGTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: LVGRCLDCPMDLGPPEVLVLLLQ*VHPVGV
Trigger: TACTCCCACAGGATGGACTCACTGCAGAAGCAGGAC...CAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp CTGACGGACCCACAGCAAGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGCATTCACAACGTGGGTaGTTCCCAGCTGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: LTDPQQALQRSQCGRLVGHSQRG*FPAGSA
Trigger: AGCTGATCCAGCTGGGAATCACCCACGTTGTGAATG...CCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGTCCGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp AGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATTCACAACGTGGGTaGTTCCCAGCTGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: SAAAKPMWAAGREMPGLPHSQRG*FPAGSA
Trigger: AGCTGATCCAGCTGGGAATCACCCACGTTGTGAATG...GGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp AGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCACCGTCCTGCCGGAGGAAGCCTaGGTTAGGGCAGATATTGCG +
Preference number: 4 (lower is better)
Translates to: SCRRKPELGQILRWACTVLPEEA*VRADIA
Trigger: CGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAG...GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTGGTGCTGCCTCACGGTaGTCACCGCCTGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPAGAASR*SPPGAG
Trigger: CCCTGCGCCAGGCGGTGATCACCGTGAGGCAGCACC...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000491677.6
CDS-3UTR TCA 90 bp CCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGCCCTGGCATCTCCTATaGAAAGGTTGGGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: PSPAPVGCPEPGAAGGSLPWHLL*KGWAKL
Trigger: AAGTTTGGCCCAACCTTTTCATAGGAGATGCCAGGG...CAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494588.2
CDS-3UTR GCA 90 bp CTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCAGTGAGTCCATCCCTTCGTCCACACGGCTaGAAGAAGACTTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LPHGSWASGGPASAVSPSLRPHG*KKTSLP
Trigger: GGGCAGGGAAGTCTTCTTGCAGCCGTGTGGACGAAG...GGATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCACGGGCAGTTCGTGCTaGTGGCTTTCAGCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: RWACTVWMASTSVMFSQITGSSC*WLSAAC
Trigger: ACAGGCGGCTGAAAGCCAGCAGCACGAACTGCCCGT...GATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGTGTCCACCTGGAACTTaGCTGCAGCGGCATTCACAA +
Preference number: 4 (lower is better)
Translates to: PARSEPPRLPPQSVVQNLCPPGT*LQRHSQ
Trigger: TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACA...CAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp AGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCAGATATTGCGGTGGGCCTaGACCGTCTGGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RCLDCPMDLGPPEVLLLQILRWA*TVWMAS
Trigger: AGAGGCCATCCAGACGGTGCAGGCCCACCGCAATAT...CTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCGCCTCAGCCCCCACTTaGTGTTTACATCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PMWAAGREMPGLPHGSWAASAPT*CLHLRV
Trigger: GACCCTGAGATGTAAACAGCAAGTGGGGGCTGAGGC...GGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
CDS-3UTR GCA 90 bp GGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTGGTCACTCCTCTCTaGCTCTCCAGTGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: GRLVGRCLDCPMDLGPPEVVTPL*LSSVIS
Trigger: AGAAATGACACTGGAGAGGCAGAGAGGAGTGACCAC...CTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372702.7
CDS-3UTR GCA 90 bp ATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCAGCCCGCCCACCCCTCTaGCTCTGTGGTCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: ILRWACTVWMASTSVMFSARPPL*LCGHSS
Trigger: AGAGGAGTGACCACAGAGGCAGAGGGGTGGGCGGGC...TGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp TGCCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCCTCAAAGCGGTTGTTTaGCGTGGCCGCATCTCCTAT +
Preference number: 4 (lower is better)
Translates to: CLPDQNRPVSRPSRLSRTLKAVV*RGRISY
Trigger: ATAGGAGATGCGGCCACGGCAAACAACCGCTTTGAG...GGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000479884.6
CDS-3UTR GCA 90 bp GTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGCTCAAAGCGGTTGTTTaGCGTGGCCGCATCTCCTAT +
Preference number: 4 (lower is better)
Translates to: VSRPSRLSRTWSCRRKPELKAVV*RGRISY
Trigger: ATAGGAGATGCGGCCACGGCAAACAACCGCTTTGAG...CTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000479884.6
CDS-3UTR GCA 90 bp CAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCACCAGCAGGATCAGTaGCAGGGTGGCAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: QRSQCGRLVGRCLDCPMDHQQDQ*QGGKVA
Trigger: TGCCACTTTGCCACCCTGGCACTGATCCTGCTGGTG...ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGTCCTGTGGGAGTATCTaGCCCAGGCTGTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: LVGRCLDCPMDLGPPEVLSCGSI*PRLCTS
Trigger: AGAAGTGCACAGCCTGGGCCAGATACTCCCACAGGA...CAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CAAGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCAGTGAGTCCATCCTGTaGGAGTATCTGGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QALQRSQCGRLVGRCLDCSESIL*EYLAQA
Trigger: AGCCTGGGCCAGATACTCCCACAGGATGGACTCACT...GCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCGCCTGGACTGCCCCATaGATCTTGGGCCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCAWTAP*ILGLRR
Trigger: CCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGC...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GTGGGTGATTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCGCAGCGAAGCCAATGTaGGCGGCTGGTAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: VGDSQLDQLALVPGCVRIAAKPM*AAGREM
Trigger: CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGC...GATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp ATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCCGATATGGTTCAGTGTaGCAGCCTGACGGACCCACA +
Preference number: 4 (lower is better)
Translates to: MWAAGREMPGLPHGSWASRYGSV*QPDGPT
Trigger: TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCG...GGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCTCCCAGGAAGAGGCTaGGCCAGACCTCATCGATAT +
Preference number: 4 (lower is better)
Translates to: GRCLDCPMDLGPPEVLLLLPGRG*ARPHRY
Trigger: ATATCGATGAGGTCTGGCCCAGCCTCTTCCTGGGAG...CAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCAGGAAGAGCGGTTGTCCAGAACCTaGAGCTGCCGGAGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: QLDQLALVPGCVRISQEERLSRT*SCRRKP
Trigger: AGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCG...CTCTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCCCAGGGCCAGGCTGGTaGGGTTGGGCCAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRAPGPGW*GWAKGQ
Trigger: CTGACCCTTGGCCCAACCCCACCAGCCTGGCCCTGG...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp AGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCACCGTCGTGTTGAGGGCACGGTaGATGAAGTCAGCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: SCRRKPELGQILRWACTVVLRAR*MKSAAE
Trigger: CTCTGCGGCTGACTTCATCCACCGTGCCCTCAACAC...GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGACGGTGATCACCGCCTaGCGCAGGGACAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PPRCHSTPGTFHGRIWHLTVITA*RRDSRW
Trigger: CCAGCGGCTGTCCCTGCGCCAGGCGGTGATCACCGT...CAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372702.7
CDS-3UTR CCA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTCTGGCCCCTCAGCTCTaGCCGGCACCCCGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: APTCCLHLRVTRNSRACCLAPQL*PAPRSC
Trigger: GCAACTGCGGGGTGCCGGCCAGAGCTGAGGGGCCAG...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000491677.6
CDS-3UTR CCA 90 bp GGCTGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAAGTGGCAGAGCCCCATaGCAGGGAGTAAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: GWARPHRYGSVWQPDGPTSGRAP*QGVRTS
Trigger: GCTGGTCCTTACTCCCTGCCATGGGGCTCTGCCACT...TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCGCCAGGGTGGCAAAGTaGCAGAGCCCCATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCARVAK*QSPMAG
Trigger: CCCTGCCATGGGGCTCTGCCACTTTGCCACCCTGGC...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR CCA 90 bp TGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAGGGCCGACCCCACGCTaGGCTTCCACCATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: WARPHRYGSVWQPDGPTAGPTPR*ASTIFC
Trigger: ACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGCCC...TGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCGACTCAGGCCAGCACTaGATGTCAGGCCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCDSGQH*MSGPTR
Trigger: CCGGGTGGGGCCTGACATCCAGTGCTGGCCTGAGTC...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605915.5
CDS-3UTR CCA 90 bp GGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATGAGGGAGGCTGTGCCTaGCCCCCTGGCATCTCCTAT +
Preference number: 4 (lower is better)
Translates to: GTCVHLELACSGIHNVGDEGGCA*PPGISY
Trigger: ATAGGAGATGCCAGGGGGCCAGGCACAGCCTCCCTC...ATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494588.2
CDS-3UTR TCA 90 bp CGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGTTCAGTGTGGCAGCCTaGCGGACCCACAGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: RLSRTWSCRRKPELGQILFSVAA*RTHSKR
Trigger: GCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAA...CAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp GACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAAGCGCTGGGCCTTGGGGAACACTaGGGGCAGCTCGGATGTATC +
Preference number: 4 (lower is better)
Translates to: DLIDMVQCGSLTDPQQALGLGEH*GQLGCI
Trigger: GATACATCCGAGCTGCCCTCAGTGTTCCCCAAGGCC...CAGCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp AGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCTGTTCTCACAGATCATaGGGAAGGCCAGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: SAAAKPMWAAGREMPGLPCSHRS*GRPGQV
Trigger: CACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACA...GGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp GATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCCGTTCAGCACGTGGGTaGTGCCCAGCTTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: DIAVGLHRLDGLYQRHVLRSARG*CPASTA
Trigger: AGCTGTGGAAGCTGGGCATCACCCACGTGCTGAACG...GAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCAGGAAGAGCTTCGTCCACACGGCTaGAAGAAGACTTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QLDQLALVPGCVRISQEELRPHG*KKTSLP
Trigger: GGGCAGGGAAGTCTTCTTGCAGCCGTGTGGACGAAG...CTCTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp TGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: WARPHRYGSVWQPDGPTAGLRRS*FCSESI
Trigger: GATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCC...TGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCGGGAGATGCCTGGACTaGCCCATGGATCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: DIAVGLHRLDGLYQRHVLGRCLD*PMDLGP
Trigger: AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC...GAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp TTTCTGTGGAGACTGAAGACAGTGGCTGAGAGGGGGTGTAGGCGCCAGGAGGAGACCCACAGCAAGCGCTaGAGCGAAGCCAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: FLWRLKTVAERGCRRQEETHSKR*SEANVG
Trigger: GCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGT...CTCCTCCTGGCGCCTACACCCCCTCTCAGCCACTGTCTTCAGTCTCCACAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCGGGATCCTGGCTGCCTaGCAGATCAGAACCGCCCCG +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRAGILAA*QIRTAP
Trigger: CGGGGCGGTTCTGATCTGGCAGGCAGCCAGGATCCC...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGCCCGCCCACCCCTCTaGCTCTGTGGTCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: EFGTCVHLELACSGIHNVARPPL*LCGHSS
Trigger: AGAGGAGTGACCACAGAGGCAGAGGGGTGGGCGGGC...CACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCGCCCGCCCACCCCTCTaGCTCTGTGGTCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRAARPPL*LCGHSS
Trigger: AGAGGAGTGACCACAGAGGCAGAGGGGTGGGCGGGC...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR GCA 90 bp GCAGATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTGGTAGCTCACACTGCTaGCGTAGAAGTCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: ADIAVGLHRLDGLYQRHVGSSHC*RRSQGR
Trigger: GCGGCCCTGACTTCTACGGCAGCAGTGTGAGCTACC...AACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTCCGGCACCCCGCAGTTaGTGGTCCAGCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: APTCCLHLRVTRNSRACCPAPRS*WSSLQS
Trigger: GCTCTGCAGGCTGGACCAGCAACTGCGGGGTGCCGG...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000491677.6
CDS-3UTR GCA 90 bp CAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCAGGAAGAGCACCAGCAGGATCAGTaGCAGGGTGGCAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: QLDQLALVPGCVRISQEEHQQDQ*QGGKVA
Trigger: TGCCACTTTGCCACCCTGGCACTGATCCTGCTGGTG...CTCTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCGCAGGGGCAGGACTCTaGCTGAGCGGAACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRAAGAGL*LSGTGL
Trigger: CAGCCCTGTTCCGCTCAGGCAGAGTCCTGCCCCTGC...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472493.6
ENST00000605915.5
CDS-3UTR CCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCGAGAGGTCTCAGCCATaGGCCAGCCCGCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGERSQP*ASPPTP
Trigger: AGGGGTGGGCGGGCTGGCCCATGGCTGAGACCTCTC...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR CCA 90 bp GGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATGGCAGTTCGTGCTGCTaGCTTTCAGCCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GTCVHLELACSGIHNVGDGSSCC*LSAACL
Trigger: GAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCC...ATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp TGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCACCTCCTGTGGGAGTATCTaGCCCAGGCTGTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: WSCRRKPELGQILRWACTSCGSI*PRLCTS
Trigger: AGAAGTGCACAGCCTGGGCCAGATACTCCCACAGGA...GGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCAGATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTGCAGCGAAGCCAATGTaGGCGGCTGGTAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: ADIAVGLHRLDGLYQRHVAAKPM*AAGREM
Trigger: CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGC...AACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp AGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCACCGTCCGATATGGTTCAGTGTaGCAGCCTGACGGACCCACA +
Preference number: 4 (lower is better)
Translates to: SCRRKPELGQILRWACTVRYGSV*QPDGPT
Trigger: TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCG...GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTCCCAGGAAGAGGCTaGGCCAGACCTCATCGATAT +
Preference number: 4 (lower is better)
Translates to: QRSQCGRLVGRCLDCPMDLPGRG*ARPHRY
Trigger: ATATCGATGAGGTCTGGCCCAGCCTCTTCCTGGGAG...ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp TGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCACCCTCCCAGGAAGAGGCTaGGCCAGACCTCATCGATAT +
Preference number: 4 (lower is better)
Translates to: WSCRRKPELGQILRWACTLPGRG*ARPHRY
Trigger: ATATCGATGAGGTCTGGCCCAGCCTCTTCCTGGGAG...GGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CTGCCTGCCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACTTCCACGGTAGAATTTaGCACCTGTGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: LPARSEPPRLPPQSVVQNFHGRI*HLCPPG
Trigger: TCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAA...GTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGGCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp AGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCTTCCACGGTAGAATTTaGCACCTGTGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: SAAAKPMWAAGREMPGLPFHGRI*HLCPPG
Trigger: TCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAA...GGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp TTTCTGTGGAGACTGAAGACAGTGGCTGAGAGGGGGTGTAGGCGCCAGGAGGAGGGGCAGATATTGCGGTaGGCCTGCACCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: FLWRLKTVAERGCRRQEEGQILR*ACTVWM
Trigger: CATCCAGACGGTGCAGGCCCACCGCAATATCTGCCC...CTCCTCCTGGCGCCTACACCCCCTCTCAGCCACTGTCTTCAGTCTCCACAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCAGTGAGTCCATCCAAGGGTCAGGGATCCTaGCTGCCTGCCAGATCAGAA +
Preference number: 4 (lower is better)
Translates to: LPHGSWASGGPASAVSPSKGQGS*LPARSE
Trigger: TTCTGATCTGGCAGGCAGCCAGGATCCCTGACCCTT...GGATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
CDS-3UTR CCA 90 bp GGTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTCCAGGGCCAGGCTGGTaGGGTTGGGCCAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GCRPPRCHSTPGTFHGRIPGPGW*GWAKGQ
Trigger: CTGACCCTTGGCCCAACCCCACCAGCCTGGCCCTGG...AATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
CDS-3UTR CCA 90 bp ACAACGTGGGTGATTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGGATCAGTGCCAGGGTaGCAAAGTGGCAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: TTWVIPSWISLLLSRAAYGSVPG*QSGRAP
Trigger: TGGGGCTCTGCCACTTTGCCACCCTGGCACTGATCC...GTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCACGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp TTTCTGTGGAGACTGAAGACAGTGGCTGAGAGGGGGTGTAGGCGCCAGGAGGAGGGATCAGTGCCAGGGTaGCAAAGTGGCAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: FLWRLKTVAERGCRRQEEGSVPG*QSGRAP
Trigger: TGGGGCTCTGCCACTTTGCCACCCTGGCACTGATCC...CTCCTCCTGGCGCCTACACCCCCTCTCAGCCACTGTCTTCAGTCTCCACAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTGGGCCGACCCCACGCTaGGCTTCCACCATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: APVSTWNLPAAAFTTWVIGPTPR*ASTIFC
Trigger: ACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGCCC...AATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTGTCCATCCTGGGGCATaGCCTGGGGCCGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: APTCCLHLRVTRNSRACCVHPGA*PGAGNG
Trigger: CCCATTCCCGGCCCCAGGCCATGCCCCAGGATGGAC...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472493.6
3UTR CAA 72 bp ACAACGTGGGTGATTCCCAGCTGGATCAGCTTGCTCTaGTCCCGGGCTGCGTACGCATCTCCCAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: TTWVIPSWISLL*SRAAYASPRKR
Trigger: CCTCTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCACGTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp GTGGGTGATTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCGTCCTGCTTCTGCAGTaGGTCCATCCTGTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: VGDSQLDQLALVPGCVRIVLLLQ*VHPVGV
Trigger: TACTCCCACAGGATGGACTCACTGCAGAAGCAGGAC...GATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp CAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCTTCAGTGTGGCAGCCTaGCGGACCCACAGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: QGHSTVEFGTCVHLELACFSVAA*RTHSKR
Trigger: GCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAA...GCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCTTCAGTGTGGCAGCCTaGCGGACCCACAGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRAFSVAA*RTHSKR
Trigger: GCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAA...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp CCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTTCAGTGTGGCAGCCTaGCGGACCCACAGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: PPRCHSTPGTFHGRIWHLFSVAA*RTHSKR
Trigger: GCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAA...CAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp GCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGAGCAGAAAGTAGACACTaGGGTCGAAGAAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: AAKPMWAAGREMPGLPHGAESRH*GRRRGC
Trigger: ACAACCCCTTCTTCGACCTCAGTGTCTACTTTCTGC...TCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp CAAGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCGCAGAAAGTAGACACTaGGGTCGAAGAAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: QALQRSQCGRLVGRCLDCAESRH*GRRRGC
Trigger: ACAACCCCTTCTTCGACCTCAGTGTCTACTTTCTGC...GCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCGGCCTTGGGGAACACTaGGGGCAGCTCGGATGTATC +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCGLGEH*GQLGCI
Trigger: GATACATCCGAGCTGCCCTCAGTGTTCCCCAAGGCC...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp TGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCACTGCCGGAGGAAGCCTaGGTTAGGGCAGATATTGCG +
Preference number: 4 (lower is better)
Translates to: WARPHRYGSVWQPDGPTALPEEA*VRADIA
Trigger: CGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAG...TGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp CGAAGAAGGGGTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACCGTTCAGCACGTGGGTaGTGCCCAGCTTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: RRRGCRPPRCHSTPGTFHRSARG*CPASTA
Trigger: AGCTGTGGAAGCTGGGCATCACCCACGTGCTGAACG...GTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAACCCCTTCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp CCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCAGTGAGTTGTTTCTGTGGAGACTaGAGACAGTGGCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PGLPHGSWASGGPASAVSCFCGD*RQWLRG
Trigger: CCCTCTCAGCCACTGTCTTCAGTCTCCACAGAAACA...ACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGGGCAGGACTCTGCCTaGGCGGAACAGGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LAVYISGSLETAEPAVPRGQDSA*AEQGWA
Trigger: TGCCCAGCCCTGTTCCGCTCAGGCAGAGTCCTGCCC...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472493.6
ENST00000605915.5
CDS-3UTR GCA 90 bp GATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCATCTGGCCCAGGCTGTaGACTTCTCTGACGGGCAGT +
Preference number: 4 (lower is better)
Translates to: DIAVGLHRLDGLYQRHVLIWPRL*TSLTGS
Trigger: ACTGCCCGTCAGAGAAGTGCACAGCCTGGGCCAGAT...GAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCGLRRS*FCSESI
Trigger: GATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCC...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCGGGAGATGCCTGGACTaGCCCATGGATCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCGRCLD*PMDLGP
Trigger: AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GCTGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGTGTCGTCCGCCTCGATaGCATAGTACTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: AGPDLIDMVQCGSLTDPQCRPPR*HSTPGT
Trigger: TGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA...CTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAAATATTGCGGTGGGCCTaGACCGTCTGGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GPDLIDMVQCGSLTDPQQILRWA*TVWMAS
Trigger: AGAGGCCATCCAGACGGTGCAGGCCCACCGCAATAT...TTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGGGGATCCTGGCTGCCTaGCAGATCAGAACCGCCCCG +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQGILAA*QIRTAP
Trigger: CGGGGCGGTTCTGATCTGGCAGGCAGCCAGGATCCC...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTGGGATCCTGGCTGCCTaGCAGATCAGAACCGCCCCG +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPAGILAA*QIRTAP
Trigger: CGGGGCGGTTCTGATCTGGCAGGCAGCCAGGATCCC...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCGGGATCCTGGCTGCCTaGCAGATCAGAACCGCCCCG +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGGILAA*QIRTAP
Trigger: CGGGGCGGTTCTGATCTGGCAGGCAGCCAGGATCCC...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp ATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCAGTCAGGGATCCTGGCTaGCTGCCAGATCAGAACCGC +
Preference number: 4 (lower is better)
Translates to: ILRWACTVWMASTSVMFSVRDPG*LPDQNR
Trigger: GCGGTTCTGATCTGGCAGGCAGCCAGGATCCCTGAC...TGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
CDS-3UTR GCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCAGCTATCCCTGCCTCTaGCTCAGCCCCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCSYPCL*LSPHLL
Trigger: CAGCAAGTGGGGGCTGAGGCAGAGGCAGGGATAGCT...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTCCCCCAGGTAGCTCACACTaGTGCCGTAGAAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PVSTWNLPAAAFTTWVIPPGSSH*CRRSQG
Trigger: GCCCTGACTTCTACGGCAGCAGTGTGAGCTACCTGG...GGGAATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp TTTCTGTGGAGACTGAAGACAGTGGCTGAGAGGGGGTGTAGGCGCCAGGAGGAGCCAGGTAGCTCACACTaGTGCCGTAGAAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: FLWRLKTVAERGCRRQEEPGSSH*CRRSQG
Trigger: GCCCTGACTTCTACGGCAGCAGTGTGAGCTACCTGG...CTCCTCCTGGCGCCTACACCCCCTCTCAGCCACTGTCTTCAGTCTCCACAGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GGCAGTTCGTGCTGCTGGCTTTCAGCCGCCTGTCTCCGCACACTTGATGCTGTTCCAGGTAGCTCACACTaGTGCCGTAGAAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GSSCCWLSAACLRTLDAVPGSSH*CRRSQG
Trigger: GCCCTGACTTCTACGGCAGCAGTGTGAGCTACCTGG...AACAGCATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGGCAGGGGCAGGACTCTaGCTGAGCGGAACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQAGAGL*LSGTGL
Trigger: CAGCCCTGTTCCGCTCAGGCAGAGTCCTGCCCCTGC...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472493.6
ENST00000605915.5
CDS-3UTR CCA 90 bp TGCTGGCTTTCAGCCGCCTGTCTCCGCACACTTGATGCTGTTTCTGTGGAGACTCTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CWLSAACLRTLDAVSVETLPHGS*ASGGPA
Trigger: AGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG...AGTCTCCACAGAAACAGCATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCCTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRALPHGS*ASGGPA
Trigger: AGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCGCCTGGACTGCCCCATaGATCTTGGGCCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGAWTAP*ILGLRR
Trigger: CCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGC...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCGCAGCGAAGCCAATGTaGGCGGCTGGTAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCAAKPM*AAGREM
Trigger: CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGC...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp AGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCACCGTCTGGGTGATTCCCAGCTaGATCAGCTTGCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SCRRKPELGQILRWACTVWVIPS*ISLLLS
Trigger: GGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCA...GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCAGTGAGTTGGGTGATTCCCAGCTaGATCAGCTTGCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PGLPHGSWASGGPASAVSWVIPS*ISLLLS
Trigger: GGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCA...ACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGTTCCACGGTAGAATTTaGCACCTGTGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: LVGRCLDCPMDLGPPEVLFHGRI*HLCPPG
Trigger: TCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAA...CAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGACCAGCACGCGGCCTTaGGGAACACTGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GTFHGRIWHLCPPGTCLQTSTRP*GTLRAA
Trigger: AGCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGT...CTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCACCAGCACGCGGCCTTaGGGAACACTGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRATSTRP*GTLRAA
Trigger: AGCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGT...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTAGCGGCTTACCCCCATaGCACAGTGTACCAGCACGC +
Preference number: 4 (lower is better)
Translates to: APVSTWNLPAAAFTTWVISGLPP*HSVPAR
Trigger: GCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGCT...AATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCTGGGCCTGCACCGTCTaGATGGCCTCTACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: QGHSTVEFGTCVHLELACWACTV*MASTSV
Trigger: GACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCA...GCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCGGGCAGATATTGCGGTaGGCCTGCACCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCGQILR*ACTVWM
Trigger: CATCCAGACGGTGCAGGCCCACCGCAATATCTGCCC...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCCGGTTGTCCAGAACCTaGAGCTGCCGGAGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCRLSRT*SCRRKP
Trigger: AGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCG...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAAGGAGTCAGGGACCCTaGGGCATGGCCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: KESLNWVREIHPLRGHHPRSQGP*GMAWGR
Trigger: CCGGCCCCAGGCCATGCCCCAGGGTCCCTGACTCCT...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605915.5
CDS-3UTR TCA 90 bp GGTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTTCAGTGTGGCAGCCTaGCGGACCCACAGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: GCRPPRCHSTPGTFHGRIFSVAA*RTHSKR
Trigger: GCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAA...AATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTTTCAGTGTGGCAGCCTaGCGGACCCACAGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPAFSVAA*RTHSKR
Trigger: GCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAA...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp GTGGGTGATTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCCATTCACAACGTGGGTaGTTCCCAGCTGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: VGDSQLDQLALVPGCVRIHSQRG*FPAGSA
Trigger: AGCTGATCCAGCTGGGAATCACCCACGTTGTGAATG...GATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp GCTGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCATTCACAACGTGGGTaGTTCCCAGCTGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: AGPDLIDMVQCGSLTDPQHSQRG*FPAGSA
Trigger: AGCTGATCCAGCTGGGAATCACCCACGTTGTGAATG...CTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp CGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCCATTCACAACGTGGGTaGTTCCCAGCTGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: RWACTVWMASTSVMFSQIHSQRG*FPAGSA
Trigger: AGCTGATCCAGCTGGGAATCACCCACGTTGTGAATG...GATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp CCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCAGGAAGGCAGAAAGTAGACACTaGGGTCGAAGAAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: PSWISLLLSRAAYASPRKAESRH*GRRRGC
Trigger: ACAACCCCTTCTTCGACCTCAGTGTCTACTTTCTGC...CTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp CCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCAGTGAGTGCAGAAAGTAGACACTaGGGTCGAAGAAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: PGLPHGSWASGGPASAVSAESRH*GRRRGC
Trigger: ACAACCCCTTCTTCGACCTCAGTGTCTACTTTCTGC...ACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp GTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGGGCCTTGGGGAACACTaGGGGCAGCTCGGATGTATC +
Preference number: 4 (lower is better)
Translates to: VWMASTSVMFSQIMRKARGLGEH*GQLGCI
Trigger: GATACATCCGAGCTGCCCTCAGTGTTCCCCAAGGCC...CCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp AGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCAGTGGCCGCATCTCCTATaGAAAGGTTGGGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: RCLDCPMDLGPPEVLLLQWPHLL*KGWAKL
Trigger: AAGTTTGGCCCAACCTTTTCATAGGAGATGCGGCCA...CTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000479884.6
CDS-3UTR TCA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGGGCAGGACTCTGCCTaGGCGGAACAGGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KESLNWVREIHPLRGHHPGQDSA*AEQGWA
Trigger: TGCCCAGCCCTGTTCCGCTCAGGCAGAGTCCTGCCC...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472493.6
ENST00000605915.5
CDS-3UTR GCA 90 bp GAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGCAAGAAGACTTCCCTaGCCGCAGGAGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: EFGTCVHLELACSGIHNVARRLP*PQELLQ
Trigger: CTGGAGGAGCTCCTGCGGGCAGGGAAGTCTTCTTGC...CACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTCTTCGTCCACACGGCTaGAAGAAGACTTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: APVSTWNLPAAAFTTWVILRPHG*KKTSLP
Trigger: GGGCAGGGAAGTCTTCTTGCAGCCGTGTGGACGAAG...AATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp TGCTGGCTTTCAGCCGCCTGTCTCCGCACACTTGATGCTGTTTCTGTGGAGACTACGGGCAGTTCGTGCTaGTGGCTTTCAGCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: CWLSAACLRTLDAVSVETTGSSC*WLSAAC
Trigger: ACAGGCGGCTGAAAGCCAGCAGCACGAACTGCCCGT...AGTCTCCACAGAAACAGCATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCATCTGGCCCAGGCTGTaGACTTCTCTGACGGGCAGT +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCIWPRL*TSLTGS
Trigger: ACTGCCCGTCAGAGAAGTGCACAGCCTGGGCCAGAT...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR GCA 90 bp GGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: GTFHGRIWHLCPPGTCLQGLRRS*FCSESI
Trigger: GATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCC...CTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRAGLRRS*FCSESI
Trigger: GATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCC...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCGGGAGATGCCTGGACTaGCCCATGGATCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRAGRCLD*PMDLGP
Trigger: AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCACCCACAGCAAGCGCTaGAGCGAAGCCAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRATHSKR*SEANVG
Trigger: GCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGT...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCACCCACAGCAAGCGCTaGAGCGAAGCCAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: VRLDAIVLQGHSTVEFGTTHSKR*SEANVG
Trigger: GCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGT...GGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACCCACAGCAAGCGCTaGAGCGAAGCCAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: VWMASTSVMFSQIMRKARTHSKR*SEANVG
Trigger: GCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGT...CCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGCCAGCTGGATCAGCTTaGTCTTGTCCCGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: GTFHGRIWHLCPPGTCLQPAGSA*SCPGLR
Trigger: ACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGG...CTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCCCAGCTGGATCAGCTTaGTCTTGTCCCGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRAPAGSA*SCPGLR
Trigger: ACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGG...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCCCAGCTGGATCAGCTTaGTCTTGTCCCGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: QGHSTVEFGTCVHLELACPAGSA*SCPGLR
Trigger: ACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGG...GCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCTGTCGTCCGCCTCGATaGCATAGTACTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: DIAVGLHRLDGLYQRHVLCRPPR*HSTPGT
Trigger: TGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA...GAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATATTGCGGTGGGCCTaGACCGTCTGGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: HSTVEFGTCVHLELACSGILRWA*TVWMAS
Trigger: AGAGGCCATCCAGACGGTGCAGGCCCACCGCAATAT...GCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGATATTGCGGTGGGCCTaGACCGTCTGGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RLSRTWSCRRKPELGQILILRWA*TVWMAS
Trigger: AGAGGCCATCCAGACGGTGCAGGCCCACCGCAATAT...CAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAAGCGCTGGCCTCAGCCCCCACTTaGTGTTTACATCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: DLIDMVQCGSLTDPQQALASAPT*CLHLRV
Trigger: GACCCTGAGATGTAAACAGCAAGTGGGGGCTGAGGC...CAGCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
CDS-3UTR GCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGCTATCCCTGCCTCTaGCTCAGCCCCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRASYPCL*LSPHLL
Trigger: CAGCAAGTGGGGGCTGAGGCAGAGGCAGGGATAGCT...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCCCAGGTAGCTCACACTaGTGCCGTAGAAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCPGSSH*CRRSQG
Trigger: GCCCTGACTTCTACGGCAGCAGTGTGAGCTACCTGG...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR GCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCTACCAGCACGCGGCCTaGAGCGGCATTCACAACGTG +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRAYQHAA*SGIHNV
Trigger: CACGTTGTGAATGCCGCTGCAGGCCGCGTGCTGGTA...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464872.5
CDS-3UTR GCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCGAATGGGGGAGTGGGTaGAGGGGCAGGACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGEWGSG*RGRTLP
Trigger: AGGCAGAGTCCTGCCCCTGCACCCACTCCCCCATTC...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472493.6
ENST00000605915.5
CDS-3UTR GCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTGAATGGGGGAGTGGGTaGAGGGGCAGGACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPAEWGSG*RGRTLP
Trigger: AGGCAGAGTCCTGCCCCTGCACCCACTCCCCCATTC...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472493.6
ENST00000605915.5
CDS-3UTR CCA 90 bp GATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCTCCTGTGGGAGTATCTaGCCCAGGCTGTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: DIAVGLHRLDGLYQRHVLSCGSI*PRLCTS
Trigger: AGAAGTGCACAGCCTGGGCCAGATACTCCCACAGGA...GAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGCTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DGLYQRHVLTDHEEGQDKLPHGS*ASGGPA
Trigger: AGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG...CTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCGCCTGGACTGCCCCATaGATCTTGGGCCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: PLAVYISGSLETAEPAVPAWTAP*ILGLRR
Trigger: CCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGC...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGCAGCGAAGCCAATGTaGGCGGCTGGTAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: EFGTCVHLELACSGIHNVAAKPM*AAGREM
Trigger: CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGC...CACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAACTCCCAGGAAGAGGCTaGGCCAGACCTCATCGATAT +
Preference number: 4 (lower is better)
Translates to: GPDLIDMVQCGSLTDPQQLPGRG*ARPHRY
Trigger: ATATCGATGAGGTCTGGCCCAGCCTCTTCCTGGGAG...TTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTACCAGCACGCGGCCTTaGGGAACACTGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPATSTRP*GTLRAA
Trigger: AGCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGT...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TTGGGGAACACTGAGGGCAGCTCGGATGTATCGAGCAACAGGCAGAAAGTAGACACCAGCACGCGGCCTTaGGGAACACTGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LGNTEGSSDVSSNRQKVDTSTRP*GTLRAA
Trigger: AGCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGT...GTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCTGCCCTCAGTGTTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTTGGGCCTGCACCGTCTaGATGGCCTCTACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPAWACTV*MASTSV
Trigger: GACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCA...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGGGGCAGATATTGCGGTaGGCCTGCACCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: VWMASTSVMFSQIMRKARGQILR*ACTVWM
Trigger: CATCCAGACGGTGCAGGCCCACCGCAATATCTGCCC...CCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCGGGCAGATATTGCGGTaGGCCTGCACCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRAGQILR*ACTVWM
Trigger: CATCCAGACGGTGCAGGCCCACCGCAATATCTGCCC...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGCGGTTGTCCAGAACCTaGAGCTGCCGGAGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: VWMASTSVMFSQIMRKARRLSRT*SCRRKP
Trigger: AGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCG...CCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCCGGTTGTCCAGAACCTaGAGCTGCCGGAGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRARLSRT*SCRRKP
Trigger: AGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCG...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGCCAGGGCCAGGCTGGTaGGGTTGGGCCAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQPGPGW*GWAKGQ
Trigger: CTGACCCTTGGCCCAACCCCACCAGCCTGGCCCTGG...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGACGGTGATCACCGCCTaGCGCAGGGACAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQTVITA*RRDSRW
Trigger: CCAGCGGCTGTCCCTGCGCCAGGCGGTGATCACCGT...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000491677.6
CDS-3UTR CCA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCACCCCGCAGTTGCTaGTCCAGCCTGCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LAVYISGSLETAEPAVPRAPRSC*SSLQSW
Trigger: CCAGCTCTGCAGGCTGGACCAGCAACTGCGGGGTGC...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000491677.6
CDS-3UTR CCA 90 bp TGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGAGTAAGGACCAGCTCTaGCCCCTCAGCTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: CRPPRCHSTPGTFHGRIWSKDQL*PLSSGR
Trigger: CCGGCCAGAGCTGAGGGGCCAGAGCTGGTCCTTACT...CCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372702.7
CDS-3UTR CCA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTGGGCCGACCCCACGCTaGGCTTCCACCATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: APTCCLHLRVTRNSRACCGPTPR*ASTIFC
Trigger: ACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGCCC...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR CCA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGCCGGGAATGGGGGAGTaGGTGCAGGGGCAGGACTCT +
Preference number: 4 (lower is better)
Translates to: LAVYISGSLETAEPAVPRPGMGE*VQGQDS
Trigger: AGAGTCCTGCCCCTGCACCCACTCCCCCATTCCCGG...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472493.6
ENST00000605915.5
CDS-3UTR CCA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCAGTGAGTCCATCCTaGGGCATGGCCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: KESLNWVREIHPLRGHHPAVSPS*GMAWGR
Trigger: CCGGCCCCAGGCCATGCCCCAGGATGGACTCACTGC...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472493.6
CDS-3UTR TCA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTTTCAGTGTGGCAGCCTaGCGGACCCACAGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: PPLAVYISGSLETAEPAVFSVAA*RTHSKR
Trigger: GCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAA...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGGGCCTTGGGGAACACTaGGGGCAGCTCGGATGTATC +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQGLGEH*GQLGCI
Trigger: GATACATCCGAGCTGCCCTCAGTGTTCCCCAAGGCC...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTGGCCTTGGGGAACACTaGGGGCAGCTCGGATGTATC +
Preference number: 4 (lower is better)
Translates to: APTCCLHLRVTRNSRACCGLGEH*GQLGCI
Trigger: GATACATCCGAGCTGCCCTCAGTGTTCCCCAAGGCC...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTCGTTCAGCACGTGGGTaGTGCCCAGCTTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPARSARG*CPASTA
Trigger: AGCTGTGGAAGCTGGGCATCACCCACGTGCTGAACG...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR TCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTGTCCTGCTTCTGCAGTaGGTCCATCCCCCACGACTC +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPAVLLLQ*VHPPRL
Trigger: GAGTCGTGGGGGATGGACTCACTGCAGAAGCAGGAC...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605915.5
CDS-3UTR TCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGGTCCTGCTTCTGCAGTaGGTCCATCCTGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQVLLLQ*VHPGAW
Trigger: CCATGCCCCAGGATGGACTCACTGCAGAAGCAGGAC...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472493.6
CDS-3UTR GCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCGCAAGAAGACTTCCCTaGCCGCAGGAGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGARRLP*PQELLQ
Trigger: CTGGAGGAGCTCCTGCGGGCAGGGAAGTCTTCTTGC...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR GCA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCTGACGGGCAGTTCGTaGTGCTGGCTTTCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYLTGSS*CWLSAA
Trigger: GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAG...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR GCA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCTGACGGGCAGTTCGTaGTGCTGGCTTTCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: PPLAVYISGSLETAEPAVLTGSS*CWLSAA
Trigger: GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAG...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR GCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQGLRRS*FCSESI
Trigger: GATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCC...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCGGGAGATGCCTGGACTaGCCCATGGATCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGGRCLD*PMDLGP
Trigger: AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCGGCTGGTAGGGAGATaGCTGGACTGCCCCATGGAT +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGRLVGR*LDCPMD
Trigger: ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCG...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTCGGCTGGTAGGGAGATaGCTGGACTGCCCCATGGAT +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPARLVGR*LDCPMD
Trigger: ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCG...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGCGGCTGGTAGGGAGATaGCTGGACTGCCCCATGGAT +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQRLVGR*LDCPMD
Trigger: ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCG...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCACCCACAGCAAGCGCTaGAGCGAAGCCAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGTHSKR*SEANVG
Trigger: GCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGT...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCCACCTGGAACTTGCCTaGAGCGGCATTCACAACGTG +
Preference number: 4 (lower is better)
Translates to: HSTVEFGTCVHLELACSGHLELA*SGIHNV
Trigger: CACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTG...GCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTCACCTGGAACTTGCCTaGAGCGGCATTCACAACGTG +
Preference number: 4 (lower is better)
Translates to: APVSTWNLPAAAFTTWVIHLELA*SGIHNV
Trigger: CACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTG...AATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGCACCTGGAACTTGCCTaGAGCGGCATTCACAACGTG +
Preference number: 4 (lower is better)
Translates to: ACTVWMASTSVMFSQIMRHLELA*SGIHNV
Trigger: CACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTG...CCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCAGATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTTGTCCACCTGGAACTTaGCTGCAGCGGCATTCACAA +
Preference number: 4 (lower is better)
Translates to: ADIAVGLHRLDGLYQRHVCPPGT*LQRHSQ
Trigger: TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACA...AACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCTGTCGTCCGCCTCGATaGCATAGTACTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCCRPPR*HSTPGT
Trigger: TGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCATATTGCGGTGGGCCTaGACCGTCTGGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRAILRWA*TVWMAS
Trigger: AGAGGCCATCCAGACGGTGCAGGCCCACCGCAATAT...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTTCCAGAACCTGGAGCTaGCGGAGGAAGCCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: APVSTWNLPAAAFTTWVISRTWS*RRKPEL
Trigger: TAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGA...AATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp TTGGGGAACACTGAGGGCAGCTCGGATGTATCGAGCAACAGGCAGAAAGTAGACGTCAGGGATCCTGGCTaGCTGCCAGATCAGAACCGC +
Preference number: 4 (lower is better)
Translates to: LGNTEGSSDVSSNRQKVDVRDPG*LPDQNR
Trigger: GCGGTTCTGATCTGGCAGGCAGCCAGGATCCCTGAC...GTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCTGCCCTCAGTGTTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
CDS-3UTR GCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGGTCAGGGATCCTGGCTaGCTGCCAGATCAGAACCGC +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQVRDPG*LPDQNR
Trigger: GCGGTTCTGATCTGGCAGGCAGCCAGGATCCCTGAC...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTGTCAGGGATCCTGGCTaGCTGCCAGATCAGAACCGC +
Preference number: 4 (lower is better)
Translates to: APTCCLHLRVTRNSRACCVRDPG*LPDQNR
Trigger: GCGGTTCTGATCTGGCAGGCAGCCAGGATCCCTGAC...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GAGGGCAGCTCGGATGTATCGAGCAACAGGCAGAAAGTAGACACTGAGGTCGAAAGCTATCCCTGCCTCTaGCTCAGCCCCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: EGSSDVSSNRQKVDTEVESYPCL*LSPHLL
Trigger: CAGCAAGTGGGGGCTGAGGCAGAGGCAGGGATAGCT...TTCGACCTCAGTGTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCTGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
CDS-3UTR GCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCAAGACCCATCGGTGCTaGCTCACGGTGATCACCGCC +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGKTHRC*LTVITA
Trigger: GGCGGTGATCACCGTGAGGCAGCACCGATGGGTCTT...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000491677.6
CDS-3UTR GCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCGGGAAGACCCATCGGTaGTGCCTCACGGTGATCACC +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGGKTHR*CLTVIT
Trigger: GGTGATCACCGTGAGGCAGCACCGATGGGTCTTCCC...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000491677.6
CDS-3UTR CCA 90 bp GGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAAGGCAGTTCGTGCTGCTaGCTTTCAGCCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GRIWHLCPPGTCLQRHSQGSSCC*LSAACL
Trigger: GAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCC...TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTGGCAGTTCGTGCTGCTaGCTTTCAGCCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: APTCCLHLRVTRNSRACCGSSCC*LSAACL
Trigger: GAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCC...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR CCA 90 bp ACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTCCTCCTGTGGGAGTATCTaGCCCAGGCTGTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: TCVHLELACSGIHNVGDSSCGSI*PRLCTS
Trigger: AGAAGTGCACAGCCTGGGCCAGATACTCCCACAGGA...GGAATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCCTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PLAVYISGSLETAEPAVPLPHGS*ASGGPA
Trigger: AGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGCCTGGACTGCCCCATaGATCTTGGGCCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQAWTAP*ILGLRR
Trigger: CCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGC...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCCGATATGGTTCAGTGTaGCAGCCTGACGGACCCACA +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCRYGSV*QPDGPT
Trigger: TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCG...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAAGCGCTGTGGGTGATTCCCAGCTaGATCAGCTTGCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: DLIDMVQCGSLTDPQQALWVIPS*ISLLLS
Trigger: GGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCA...CAGCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp AGCTCGGATGTATCGAGCAACAGGCAGAAAGTAGACACTGAGGTCGAAGAAGGGACCAGCACGCGGCCTTaGGGAACACTGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSDVSSNRQKVDTEVEEGTSTRP*GTLRAA
Trigger: AGCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGT...CCCTTCTTCGACCTCAGTGTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGACCAGCACGCGGCCTTaGGGAACACTGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LAVYISGSLETAEPAVPRTSTRP*GTLRAA
Trigger: AGCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGT...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGAGCGGCTTACCCCCATaGCACAGTGTACCAGCACGC +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQSGLPP*HSVPAR
Trigger: GCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGCT...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCAGCGGCTTACCCCCATaGCACAGTGTACCAGCACGC +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGSGLPP*HSVPAR
Trigger: GCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGCT...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCTGGGCCTGCACCGTCTaGATGGCCTCTACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: PLAVYISGSLETAEPAVPWACTV*MASTSV
Trigger: GACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCA...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCGGGCAGATATTGCGGTaGGCCTGCACCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGGQILR*ACTVWM
Trigger: CATCCAGACGGTGCAGGCCCACCGCAATATCTGCCC...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTGGGCAGATATTGCGGTaGGCCTGCACCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: APTCCLHLRVTRNSRACCGQILR*ACTVWM
Trigger: CATCCAGACGGTGCAGGCCCACCGCAATATCTGCCC...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGCGGTTGTCCAGAACCTaGAGCTGCCGGAGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQRLSRT*SCRRKP
Trigger: AGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCG...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGGTGTTGAGGGCACGGTaGATGAAGTCAGCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: VWMASTSVMFSQIMRKARVLRAR*MKSAAE
Trigger: CTCTGCGGCTGACTTCATCCACCGTGCCCTCAACAC...CCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTGCAGGAAGCCTCGGTTaGGGAAGACCCATCGGTGCT +
Preference number: 4 (lower is better)
Translates to: APTCCLHLRVTRNSRACCAGSLG*GRPIGA
Trigger: AGCACCGATGGGTCTTCCCCAACCGAGGCTTCCTGC...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000491677.6
CDS-3UTR CCA 90 bp TGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGTCCAGCCTGCAGAGCTaGTGCAGGAAGCCTCGGTTG +
Preference number: 4 (lower is better)
Translates to: CRPPRCHSTPGTFHGRIWSSLQS*CRKPRL
Trigger: CAACCGAGGCTTCCTGCACCAGCTCTGCAGGCTGGA...CCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372702.7
CDS-3UTR CCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGTCCAGCCTGCAGAGCTaGTGCAGGAAGCCTCGGTTG +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQSSLQS*CRKPRL
Trigger: CAACCGAGGCTTCCTGCACCAGCTCTGCAGGCTGGA...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000491677.6
CDS-3UTR CCA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATAGTAAGGACCAGCTCTaGCCCCTCAGCTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYSKDQL*PLSSGR
Trigger: CCGGCCAGAGCTGAGGGGCCAGAGCTGGTCCTTACT...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000491677.6
CDS-3UTR CCA 90 bp ATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAAGCCAGGGTGGCAAAGTaGCAGAGCCCCATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: IVLQGHSTVEFGTCVHLEARVAK*QSPMAG
Trigger: CCCTGCCATGGGGCTCTGCCACTTTGCCACCCTGGC...TTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGGGATCAGTGCCAGGGTaGCAAAGTGGCAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: DGLYQRHVLTDHEEGQDKGSVPG*QSGRAP
Trigger: TGGGGCTCTGCCACTTTGCCACCCTGGCACTGATCC...CTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTTTCTGTGTGTCCGCCTaGGCCAGAGCCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPLAVYISGSLETAEPAVFCVSA*ARASSS
Trigger: GCTGCTGGAGGCTCTGGCCCAGGCGGACACACAGAA...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR CCA 90 bp AGCTCGGATGTATCGAGCAACAGGCAGAAAGTAGACACTGAGGTCGAAGAAGGGTTCTGTGTGTCCGCCTaGGCCAGAGCCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSDVSSNRQKVDTEVEEGFCVSA*ARASSS
Trigger: GCTGCTGGAGGCTCTGGCCCAGGCGGACACACAGAA...CCCTTCTTCGACCTCAGTGTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp TCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGTGTGGCAGGCTGTGCACTTCTCTaGCGGGCAGTTCGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: STSVMFSQIMRKARTSVAGCALL*RAVRAA
Trigger: AGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCC...TGCCACACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp GTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGGTCCTGCTTCTGCAGTaGGTCCATCCTGTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: VWMASTSVMFSQIMRKARVLLLQ*VHPVGV
Trigger: TACTCCCACAGGATGGACTCACTGCAGAAGCAGGAC...CCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCGTCCTGCTTCTGCAGTaGGTCCATCCTGTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRAVLLLQ*VHPVGV
Trigger: TACTCCCACAGGATGGACTCACTGCAGAAGCAGGAC...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR TCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCCATTCACAACGTGGGTaGTTCCCAGCTGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCHSQRG*FPAGSA
Trigger: AGCTGATCCAGCTGGGAATCACCCACGTTGTGAATG...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp GGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAAGCAGAAAGTAGACACTaGGGTCGAAGAAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: GPDLIDMVQCGSLTDPQQAESRH*GRRRGC
Trigger: ACAACCCCTTCTTCGACCTCAGTGTCTACTTTCTGC...TTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATGGCCTTGGGGAACACTaGGGGCAGCTCGGATGTATC +
Preference number: 4 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYGLGEH*GQLGCI
Trigger: GATACATCCGAGCTGCCCTCAGTGTTCCCCAAGGCC...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp GGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTGTTCTCACAGATCATaGGGAAGGCCAGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: GTCVHLELACSGIHNVGDCSHRS*GRPGQV
Trigger: CACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACA...ATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTCTGCCGGAGGAAGCCTaGGTTAGGGCAGATATTGCG +
Preference number: 4 (lower is better)
Translates to: APTCCLHLRVTRNSRACCLPEEA*VRADIA
Trigger: CGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAG...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTCTGCCGGAGGAAGCCTaGGTTAGGGCAGATATTGCG +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPALPEEA*VRADIA
Trigger: CGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAG...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCTGTTTCTGTGGAGACTaGAGACAGTGGCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCCFCGD*RQWLRG
Trigger: CCCTCTCAGCCACTGTCTTCAGTCTCCACAGAAACA...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR GCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTCTTCGTCCACACGGCTaGAAGAAGACTTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPALRPHG*KKTSLP
Trigger: GGGCAGGGAAGTCTTCTTGCAGCCGTGTGGACGAAG...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR GCA 90 bp CCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTACGGGCAGTTCGTGCTaGTGGCTTTCAGCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: PRCHSTPGTFHGRIWHLCTGSSC*WLSAAC
Trigger: ACAGGCGGCTGAAAGCCAGCAGCACGAACTGCCCGT...ACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTACGGGCAGTTCGTGCTaGTGGCTTTCAGCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: PPLAVYISGSLETAEPAVTGSSC*WLSAAC
Trigger: ACAGGCGGCTGAAAGCCAGCAGCACGAACTGCCCGT...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR GCA 90 bp GATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGATCTGGCCCAGGCTGTaGACTTCTCTGACGGGCAGT +
Preference number: 4 (lower is better)
Translates to: DGLYQRHVLTDHEEGQDKIWPRL*TSLTGS
Trigger: ACTGCCCGTCAGAGAAGTGCACAGCCTGGGCCAGAT...CTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGATCTGGCCCAGGCTGTaGACTTCTCTGACGGGCAGT +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQIWPRL*TSLTGS
Trigger: ACTGCCCGTCAGAGAAGTGCACAGCCTGGGCCAGAT...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR GCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCGGAGGTCCTGCTTCTaGAGTGAGTCCATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGRRSCF*SESILW
Trigger: CCACAGGATGGACTCACTGCAGAAGCAGGACCTCCG...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR GCA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYGLRRS*FCSESI
Trigger: GATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCC...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGGGAGATGCCTGGACTaGCCCATGGATCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LAVYISGSLETAEPAVPRGRCLD*PMDLGP
Trigger: AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTGGGAGATGCCTGGACTaGCCCATGGATCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PRCHSTPGTFHGRIWHLCGRCLD*PMDLGP
Trigger: AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC...ACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTGGGAGATGCCTGGACTaGCCCATGGATCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPLAVYISGSLETAEPAVGRCLD*PMDLGP
Trigger: AGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCC...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGACGGCTGGTAGGGAGATaGCTGGACTGCCCCATGGAT +
Preference number: 4 (lower is better)
Translates to: HSTPGTFHGRIWHLCPPGRLVGR*LDCPMD
Trigger: ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCG...TCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCCGGCTGGTAGGGAGATaGCTGGACTGCCCCATGGAT +
Preference number: 4 (lower is better)
Translates to: PLAVYISGSLETAEPAVPRLVGR*LDCPMD
Trigger: ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCG...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCGGCTGGTAGGGAGATaGCTGGACTGCCCCATGGAT +
Preference number: 4 (lower is better)
Translates to: PPLAVYISGSLETAEPAVRLVGR*LDCPMD
Trigger: ATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCG...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCAACCCACAGCAAGCGCTaGAGCGAAGCCAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: RCHSTPGTFHGRIWHLCPTHSKR*SEANVG
Trigger: GCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGT...TGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATACCCACAGCAAGCGCTaGAGCGAAGCCAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYTHSKR*SEANVG
Trigger: GCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGT...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCCCAGCTGGATCAGCTTaGTCTTGTCCCGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: PLAVYISGSLETAEPAVPPAGSA*SCPGLR
Trigger: ACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGG...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGCCAGCTGGATCAGCTTaGTCTTGTCCCGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: LAVYISGSLETAEPAVPRPAGSA*SCPGLR
Trigger: ACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGG...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCTGTCCACCTGGAACTTaGCTGCAGCGGCATTCACAA +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCCPPGT*LQRHSQ
Trigger: TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACA...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGTGTCGTCCGCCTCGATaGCATAGTACTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: VWMASTSVMFSQIMRKARCRPPR*HSTPGT
Trigger: TGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA...CCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTCGTCCGCCTCGATaGCATAGTACTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: VRLDAIVLQGHSTVEFGTCRPPR*HSTPGT
Trigger: TGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA...GGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCTGTCGTCCGCCTCGATaGCATAGTACTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRACRPPR*HSTPGT
Trigger: TGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATATTGCGGTGGGCCTaGACCGTCTGGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPAILRWA*TVWMAS
Trigger: AGAGGCCATCCAGACGGTGCAGGCCCACCGCAATAT...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGTCCAGAACCTGGAGCTaGCGGAGGAAGCCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: VWMASTSVMFSQIMRKARSRTWS*RRKPEL
Trigger: TAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGA...CCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCTCCAGAACCTGGAGCTaGCGGAGGAAGCCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRASRTWS*RRKPEL
Trigger: TAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGA...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTGTCAGGGATCCTGGCTaGCTGCCAGATCAGAACCGC +
Preference number: 4 (lower is better)
Translates to: PPLAVYISGSLETAEPAVVRDPG*LPDQNR
Trigger: GCGGTTCTGATCTGGCAGGCAGCCAGGATCCCTGAC...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCGTCAGGGATCCTGGCTaGCTGCCAGATCAGAACCGC +
Preference number: 4 (lower is better)
Translates to: PLAVYISGSLETAEPAVPVRDPG*LPDQNR
Trigger: GCGGTTCTGATCTGGCAGGCAGCCAGGATCCCTGAC...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp TGCTGGCTTTCAGCCGCCTGTCTCCGCACACTTGATGCTGTTTCTGTGGAGACTGCCTCAGCCCCCACTTaGTGTTTACATCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: CWLSAACLRTLDAVSVETASAPT*CLHLRV
Trigger: GACCCTGAGATGTAAACAGCAAGTGGGGGCTGAGGC...AGTCTCCACAGAAACAGCATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000479884.6
CDS-3UTR GCA 90 bp CCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTAGCTATCCCTGCCTCTaGCTCAGCCCCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: PRCHSTPGTFHGRIWHLCSYPCL*LSPHLL
Trigger: CAGCAAGTGGGGGCTGAGGCAGAGGCAGGGATAGCT...ACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
CDS-3UTR GCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCCTCAAAGCGGTTGTTTaGCGTGGCCGCATCTCCTAT +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCLKAVV*RGRISY
Trigger: ATAGGAGATGCGGCCACGGCAAACAACCGCTTTGAG...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR GCA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATGGTAGCTCACACTGCTaGCGTAGAAGTCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYGSSHC*RRSQGR
Trigger: GCGGCCCTGACTTCTACGGCAGCAGTGTGAGCTACC...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR GCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCGGTAGCTCACACTGCTaGCGTAGAAGTCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: PLAVYISGSLETAEPAVPGSSHC*RRSQGR
Trigger: GCGGCCCTGACTTCTACGGCAGCAGTGTGAGCTACC...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR GCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAAGACCCATCGGTGCTaGCTCACGGTGATCACCGCC +
Preference number: 4 (lower is better)
Translates to: PLAVYISGSLETAEPAVPKTHRC*LTVITA
Trigger: GGCGGTGATCACCGTGAGGCAGCACCGATGGGTCTT...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000491677.6
CDS-3UTR CCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCTCCTGTGGGAGTATCTaGCCCAGGCTGTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRASCGSI*PRLCTS
Trigger: AGAAGTGCACAGCCTGGGCCAGATACTCCCACAGGA...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR CCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGTGAGTCCATCCTGTaGGAGTATCTGGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRASESIL*EYLAQA
Trigger: AGCCTGGGCCAGATACTCCCACAGGATGGACTCACT...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR CCA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGCTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQLPHGS*ASGGPA
Trigger: AGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAG...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTGCAGCGAAGCCAATGTaGGCGGCTGGTAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: PPLAVYISGSLETAEPAVAAKPM*AAGREM
Trigger: CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGC...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCCGATATGGTTCAGTGTaGCAGCCTGACGGACCCACA +
Preference number: 4 (lower is better)
Translates to: VRLDAIVLQGHSTVEFGTRYGSV*QPDGPT
Trigger: TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCG...GGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCCTCCCAGGAAGAGGCTaGGCCAGACCTCATCGATAT +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRALPGRG*ARPHRY
Trigger: ATATCGATGAGGTCTGGCCCAGCCTCTTCCTGGGAG...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAACCAGCACGCGGCCTTaGGGAACACTGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KESLNWVREIHPLRGHHPTSTRP*GTLRAA
Trigger: AGCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGT...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATAGCGGCTTACCCCCATaGCACAGTGTACCAGCACGC +
Preference number: 4 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYSGLPP*HSVPAR
Trigger: GCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGCT...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCATGGGCCTGCACCGTCTaGATGGCCTCTACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: KESLNWVREIHPLRGHHPWACTV*MASTSV
Trigger: GACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCA...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp CTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCAAGGGTCAGGGATCCTaGCTGCCTGCCAGATCAGAA +
Preference number: 4 (lower is better)
Translates to: LQGHSTVEFGTCVHLELAKGQGS*LPARSE
Trigger: TTCTGATCTGGCAGGCAGCCAGGATCCCTGACCCTT...GGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
CDS-3UTR CCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAAGGGTCAGGGATCCTaGCTGCCTGCCAGATCAGAA +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRAKGQGS*LPARSE
Trigger: TTCTGATCTGGCAGGCAGCCAGGATCCCTGACCCTT...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp CGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCAGGATCAGTGCCAGGGTaGCAAAGTGGCAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: RCHSTPGTFHGRIWHLCPGSVPG*QSGRAP
Trigger: TGGGGCTCTGCCACTTTGCCACCCTGGCACTGATCC...TGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp ATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAAGGGCCGACCCCACGCTaGGCTTCCACCATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: IVLQGHSTVEFGTCVHLEGPTPR*ASTIFC
Trigger: ACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGCCC...TTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTGCAGTGAGTTTGATGCTGTTTCTGTaGAGACTGAAGACAGTGGCT +
Preference number: 4 (lower is better)
Translates to: PGLPHGSWASGGPASAVSLMLFL*RLKTVA
Trigger: AGCCACTGTCTTCAGTCTCCACAGAAACAGCATCAA...ACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCGCAGAAAGTAGACACTaGGGTCGAAGAAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCAESRH*GRRRGC
Trigger: ACAACCCCTTCTTCGACCTCAGTGTCTACTTTCTGC...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp AGCTCGGATGTATCGAGCAACAGGCAGAAAGTAGACACTGAGGTCGAAGAAGGGCTGCCGGAGGAAGCCTaGGTTAGGGCAGATATTGCG +
Preference number: 4 (lower is better)
Translates to: SSDVSSNRQKVDTEVEEGLPEEA*VRADIA
Trigger: CGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAG...CCCTTCTTCGACCTCAGTGTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGCTGCCGGAGGAAGCCTaGGTTAGGGCAGATATTGCG +
Preference number: 4 (lower is better)
Translates to: LAVYISGSLETAEPAVPRLPEEA*VRADIA
Trigger: CGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAG...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp CGAAGAAGGGGTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACTGGCCGCATCTCCTATaGAAAGGTTGGGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: RRRGCRPPRCHSTPGTFHWPHLL*KGWAKL
Trigger: AAGTTTGGCCCAACCTTTTCATAGGAGATGCGGCCA...GTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAACCCCTTCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000479884.6
CDS-3UTR TCA 90 bp GTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGTGTTTCTGTGGAGACTaGAGACAGTGGCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: VWMASTSVMFSQIMRKARCFCGD*RQWLRG
Trigger: CCCTCTCAGCCACTGTCTTCAGTCTCCACAGAAACA...CCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp ACAACGTGGGTGATTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACCAGCTGCATCTCCTATaGAAAGGTTGGGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: TTWVIPSWISLLLSRAAYQLHLL*KGWAKL
Trigger: AAGTTTGGCCCAACCTTTTCATAGGAGATGCAGCTG...GTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCACGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394707.7
CDS-3UTR GCA 90 bp ATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAAGCAAGAAGACTTCCCTaGCCGCAGGAGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: IVLQGHSTVEFGTCVHLEARRLP*PQELLQ
Trigger: CTGGAGGAGCTCCTGCGGGCAGGGAAGTCTTCTTGC...TTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGACGGGCAGTTCGTGCTaGTGGCTTTCAGCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQTGSSC*WLSAAC
Trigger: ACAGGCGGCTGAAAGCCAGCAGCACGAACTGCCCGT...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR GCA 90 bp CATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAATCTGGCCCAGGCTGTaGACTTCTCTGACGGGCAGT +
Preference number: 4 (lower is better)
Translates to: HSTPGTFHGRIWHLCPPGIWPRL*TSLTGS
Trigger: ACTGCCCGTCAGAGAAGTGCACAGCCTGGGCCAGAT...TCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp TCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGTGTGGCACGGAGGTCCTGCTTCTaGAGTGAGTCCATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: STSVMFSQIMRKARTSVARRSCF*SESILW
Trigger: CCACAGGATGGACTCACTGCAGAAGCAGGACCTCCG...TGCCACACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCCGGAGGTCCTGCTTCTaGAGTGAGTCCATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PLAVYISGSLETAEPAVPRRSCF*SESILW
Trigger: CCACAGGATGGACTCACTGCAGAAGCAGGACCTCCG...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR GCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTCACCTGGAACTTGCCTaGAGCGGCATTCACAACGTG +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPAHLELA*SGIHNV
Trigger: CACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTG...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTCACCTGGAACTTGCCTaGAGCGGCATTCACAACGTG +
Preference number: 4 (lower is better)
Translates to: APTCCLHLRVTRNSRACCHLELA*SGIHNV
Trigger: CACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTG...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTTGTCGTCCGCCTCGATaGCATAGTACTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPACRPPR*HSTPGT
Trigger: TGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTATATTGCGGTGGGCCTaGACCGTCTGGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PPLAVYISGSLETAEPAVILRWA*TVWMAS
Trigger: AGAGGCCATCCAGACGGTGCAGGCCCACCGCAATAT...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCATATTGCGGTGGGCCTaGACCGTCTGGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PLAVYISGSLETAEPAVPILRWA*TVWMAS
Trigger: AGAGGCCATCCAGACGGTGCAGGCCCACCGCAATAT...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCTCCAGAACCTGGAGCTaGCGGAGGAAGCCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGSRTWS*RRKPEL
Trigger: TAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGA...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGTCCAGAACCTGGAGCTaGCGGAGGAAGCCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQSRTWS*RRKPEL
Trigger: TAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGA...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GAGGGCAGCTCGGATGTATCGAGCAACAGGCAGAAAGTAGACACTGAGGTCGAATCCAGAACCTGGAGCTaGCGGAGGAAGCCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: EGSSDVSSNRQKVDTEVESRTWS*RRKPEL
Trigger: TAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGA...TTCGACCTCAGTGTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCTGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCAGAACCTGGAGCTaGCGGAGGAAGCCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: APTCCLHLRVTRNSRACCSRTWS*RRKPEL
Trigger: TAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGA...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGTCAGGGATCCTGGCTaGCTGCCAGATCAGAACCGC +
Preference number: 4 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQVRDPG*LPDQNR
Trigger: GCGGTTCTGATCTGGCAGGCAGCCAGGATCCCTGAC...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGGCCTCAGCCCCCACTTaGTGTTTACATCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQASAPT*CLHLRV
Trigger: GACCCTGAGATGTAAACAGCAAGTGGGGGCTGAGGC...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCGCCTCAGCCCCCACTTaGTGTTTACATCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGASAPT*CLHLRV
Trigger: GACCCTGAGATGTAAACAGCAAGTGGGGGCTGAGGC...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTGCCTCAGCCCCCACTTaGTGTTTACATCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: APTCCLHLRVTRNSRACCASAPT*CLHLRV
Trigger: GACCCTGAGATGTAAACAGCAAGTGGGGGCTGAGGC...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGAGCTATCCCTGCCTCTaGCTCAGCCCCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQSYPCL*LSPHLL
Trigger: CAGCAAGTGGGGGCTGAGGCAGAGGCAGGGATAGCT...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAAGCTATCCCTGCCTCTaGCTCAGCCCCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: KESLNWVREIHPLRGHHPSYPCL*LSPHLL
Trigger: CAGCAAGTGGGGGCTGAGGCAGAGGCAGGGATAGCT...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCACGGAGGTCCTGCTTCTaGAGTGAGTCCATCCCCCAC +
Preference number: 4 (lower is better)
Translates to: KESLNWVREIHPLRGHHPRRSCF*SESIPH
Trigger: GTGGGGGATGGACTCACTGCAGAAGCAGGACCTCCG...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605915.5
CDS-3UTR CCA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGGCAGTTCGTGCTGCTaGCTTTCAGCCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: KESLNWVREIHPLRGHHPGSSCC*LSAACL
Trigger: GAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCC...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR CCA 90 bp CTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGTGTGGCTCCTGTGGGAGTATCTaGCCCAGGCTGTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: LYQRHVLTDHEEGQDKCGSCGSI*PRLCTS
Trigger: AGAAGTGCACAGCCTGGGCCAGATACTCCCACAGGA...GCCACACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCTCCTGTGGGAGTATCTaGCCCAGGCTGTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGSCGSI*PRLCTS
Trigger: AGAAGTGCACAGCCTGGGCCAGATACTCCCACAGGA...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR CCA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGCAGCGAAGCCAATGTaGGCGGCTGGTAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQAAKPM*AAGREM
Trigger: CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGC...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGCGATATGGTTCAGTGTaGCAGCCTGACGGACCCACA +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQRYGSV*QPDGPT
Trigger: TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCG...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCGATATGGTTCAGTGTaGCAGCCTGACGGACCCACA +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGRYGSV*QPDGPT
Trigger: TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCG...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGCTCCCAGGAAGAGGCTaGGCCAGACCTCATCGATAT +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQLPGRG*ARPHRY
Trigger: ATATCGATGAGGTCTGGCCCAGCCTCTTCCTGGGAG...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTCTCCCAGGAAGAGGCTaGGCCAGACCTCATCGATAT +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPALPGRG*ARPHRY
Trigger: ATATCGATGAGGTCTGGCCCAGCCTCTTCCTGGGAG...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGTGGGTGATTCCCAGCTaGATCAGCTTGCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: EFGTCVHLELACSGIHNVWVIPS*ISLLLS
Trigger: GGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCA...CACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCTGGGTGATTCCCAGCTaGATCAGCTTGCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRAWVIPS*ISLLLS
Trigger: GGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCA...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGTTCCACGGTAGAATTTaGCACCTGTGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: ACTVWMASTSVMFSQIMRFHGRI*HLCPPG
Trigger: TCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAA...CCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAAGCGGCTTACCCCCATaGCACAGTGTACCAGCACGC +
Preference number: 4 (lower is better)
Translates to: KESLNWVREIHPLRGHHPSGLPP*HSVPAR
Trigger: GCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGCT...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCTGCACCGTCTGGATaGCCTCTACCAGCGTCATGT +
Preference number: 4 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYPAPSG*PLPASC
Trigger: ACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGG...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGTGTGGCACCTGCACCGTCTGGATaGCCTCTACCAGCGTCATGT +
Preference number: 4 (lower is better)
Translates to: STSVMFSQIMRKARTSVAPAPSG*PLPASC
Trigger: ACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGG...TGCCACACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGGCAGATATTGCGGTaGGCCTGCACCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQGQILR*ACTVWM
Trigger: CATCCAGACGGTGCAGGCCCACCGCAATATCTGCCC...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTAAGGGTCAGGGATCCTaGCTGCCTGCCAGATCAGAA +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPAKGQGS*LPARSE
Trigger: TTCTGATCTGGCAGGCAGCCAGGATCCCTGACCCTT...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGAAGGGTCAGGGATCCTaGCTGCCTGCCAGATCAGAA +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQKGQGS*LPARSE
Trigger: TTCTGATCTGGCAGGCAGCCAGGATCCCTGACCCTT...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCGTGTTGAGGGCACGGTaGATGAAGTCAGCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: PLAVYISGSLETAEPAVPVLRAR*MKSAAE
Trigger: CTCTGCGGCTGACTTCATCCACCGTGCCCTCAACAC...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR CCA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTGTGTTGAGGGCACGGTaGATGAAGTCAGCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: PPLAVYISGSLETAEPAVVLRAR*MKSAAE
Trigger: CTCTGCGGCTGACTTCATCCACCGTGCCCTCAACAC...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR CCA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAAGTGGCAGAGCCCCATaGCAGGGAGTAAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: KESLNWVREIHPLRGHHPSGRAP*QGVRTS
Trigger: GCTGGTCCTTACTCCCTGCCATGGGGCTCTGCCACT...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR CCA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGGATCAGTGCCAGGGTaGCAAAGTGGCAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: KESLNWVREIHPLRGHHPGSVPG*QSGRAP
Trigger: TGGGGCTCTGCCACTTTGCCACCCTGGCACTGATCC...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR TCA 90 bp CGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCAGTCCTGCTTCTGCAGTaGGTCCATCCTGTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: RCHSTPGTFHGRIWHLCPVLLLQ*VHPVGV
Trigger: TACTCCCACAGGATGGACTCACTGCAGAAGCAGGAC...TGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTCATTCACAACGTGGGTaGTTCCCAGCTGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: APTCCLHLRVTRNSRACCHSQRG*FPAGSA
Trigger: AGCTGATCCAGCTGGGAATCACCCACGTTGTGAATG...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTCATTCACAACGTGGGTaGTTCCCAGCTGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPAHSQRG*FPAGSA
Trigger: AGCTGATCCAGCTGGGAATCACCCACGTTGTGAATG...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCGCAGAAAGTAGACACTaGGGTCGAAGAAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRAAESRH*GRRRGC
Trigger: ACAACCCCTTCTTCGACCTCAGTGTCTACTTTCTGC...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGCTGCCGGAGGAAGCCTaGGTTAGGGCAGATATTGCG +
Preference number: 4 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQLPEEA*VRADIA
Trigger: CGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAG...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp GTGGGTGATTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTGCATAAAGAATCTCTaGATTGGGTCAGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: VGDSQLDQLALVPGCVRICIKNL*IGSGKS
Trigger: GGATTTCCCTGACCCAATTCAGAGATTCTTTATGCA...GATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
CDS-3UTR TCA 90 bp TGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCAGGAAGAGGCTGTGCATAAAGAATCTCTaGATTGGGTCAGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: WISLLLSRAAYASPRKRLCIKNL*IGSGKS
Trigger: GGATTTCCCTGACCCAATTCAGAGATTCTTTATGCA...CAGCCTCTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
CDS-3UTR GCA 90 bp ATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAAATCTGGCCCAGGCTGTaGACTTCTCTGACGGGCAGT +
Preference number: 4 (lower is better)
Translates to: IVLQGHSTVEFGTCVHLEIWPRL*TSLTGS
Trigger: ACTGCCCGTCAGAGAAGTGCACAGCCTGGGCCAGAT...TTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp GTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTCACCTGGAACTTGCCTaGAGCGGCATTCACAACGTG +
Preference number: 4 (lower is better)
Translates to: VVVRLDAIVLQGHSTVEFHLELA*SGIHNV
Trigger: CACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTG...AAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCCACCTGGAACTTGCCTaGAGCGGCATTCACAACGTG +
Preference number: 4 (lower is better)
Translates to: PLAVYISGSLETAEPAVPHLELA*SGIHNV
Trigger: CACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTG...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGCACCTGGAACTTGCCTaGAGCGGCATTCACAACGTG +
Preference number: 4 (lower is better)
Translates to: LAVYISGSLETAEPAVPRHLELA*SGIHNV
Trigger: CACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTG...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTTGTCCACCTGGAACTTaGCTGCAGCGGCATTCACAA +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPACPPGT*LQRHSQ
Trigger: TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACA...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGTGTCCACCTGGAACTTaGCTGCAGCGGCATTCACAA +
Preference number: 4 (lower is better)
Translates to: DGLYQRHVLTDHEEGQDKCPPGT*LQRHSQ
Trigger: TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACA...CTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCTGTCCACCTGGAACTTaGCTGCAGCGGCATTCACAA +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGCPPGT*LQRHSQ
Trigger: TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACA...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp GTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTTGTCGTCCGCCTCGATaGCATAGTACTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: VVVRLDAIVLQGHSTVEFCRPPR*HSTPGT
Trigger: TGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA...AAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGTGTCGTCCGCCTCGATaGCATAGTACTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: LAVYISGSLETAEPAVPRCRPPR*HSTPGT
Trigger: TGTCCCTGGAGTACTATGGCATCGAGGCGGACGACA...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGTCCAGAACCTGGAGCTaGCGGAGGAAGCCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: LAVYISGSLETAEPAVPRSRTWS*RRKPEL
Trigger: TAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGA...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGCACCAGCAGGATCAGTaGCAGGGTGGCAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQHQQDQ*QGGKVA
Trigger: TGCCACTTTGCCACCCTGGCACTGATCCTGCTGGTG...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR CCA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGCTCCCAGGAAGAGGCTaGGCCAGACCTCATCGATAT +
Preference number: 4 (lower is better)
Translates to: LAVYISGSLETAEPAVPRLPGRG*ARPHRY
Trigger: ATATCGATGAGGTCTGGCCCAGCCTCTTCCTGGGAG...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTTGGGTGATTCCCAGCTaGATCAGCTTGCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: ESLNWVREIHPLRGHHPAWVIPS*ISLLLS
Trigger: GGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCA...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGTTCCACGGTAGAATTTaGCACCTGTGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: EFGTCVHLELACSGIHNVFHGRI*HLCPPG
Trigger: TCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAA...CACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCTTCCACGGTAGAATTTaGCACCTGTGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: AVYISGSLETAEPAVPRAFHGRI*HLCPPG
Trigger: TCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAA...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCACCTGCACCGTCTGGATaGCCTCTACCAGCGTCATGT +
Preference number: 4 (lower is better)
Translates to: KESLNWVREIHPLRGHHPPAPSG*PLPASC
Trigger: ACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGG...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGCCTGCACCGTCTGGATaGCCTCTACCAGCGTCATGT +
Preference number: 4 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQPAPSG*PLPASC
Trigger: ACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGG...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGACCAGGGCCAGGCTGGTaGGGTTGGGCCAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLLHKESLNWVREIHPLRPGPGW*GWAKGQ
Trigger: CTGACCCTTGGCCCAACCCCACCAGCCTGGCCCTGG...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GCAGATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTTTGATGCTGTTTCTGTaGAGACTGAAGACAGTGGCT +
Preference number: 4 (lower is better)
Translates to: ADIAVGLHRLDGLYQRHVLMLFL*RLKTVA
Trigger: AGCCACTGTCTTCAGTCTCCACAGAAACAGCATCAA...AACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp GATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCTTGATGCTGTTTCTGTaGAGACTGAAGACAGTGGCT +
Preference number: 4 (lower is better)
Translates to: DIAVGLHRLDGLYQRHVLLMLFL*RLKTVA
Trigger: AGCCACTGTCTTCAGTCTCCACAGAAACAGCATCAA...GAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATGTTTCAGGCATCTGCTaGCTGAAGGAGTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYVSGIC*LKESGT
Trigger: GGTCCCTGACTCCTTCAGCCAGCAGATGCCTGAAAC...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605915.5
CDS-3UTR TCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGTGTTCTCACAGATCATaGGGAAGGCCAGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQCSHRS*GRPGQV
Trigger: CACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACA...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTGTTCTCACAGATCATaGGGAAGGCCAGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: APTCCLHLRVTRNSRACCCSHRS*GRPGQV
Trigger: CACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACA...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCTGTTCTCACAGATCATaGGGAAGGCCAGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGCSHRS*GRPGQV
Trigger: CACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACA...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp CGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCATGTCCACCTGGAACTTaGCTGCAGCGGCATTCACAA +
Preference number: 4 (lower is better)
Translates to: RCHSTPGTFHGRIWHLCPCPPGT*LQRHSQ
Trigger: TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACA...TGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR GCA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATTGTCCACCTGGAACTTaGCTGCAGCGGCATTCACAA +
Preference number: 4 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYCPPGT*LQRHSQ
Trigger: TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACA...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGGATCCTGGCTGCCTaGCAGATCAGAACCGCCCCG +
Preference number: 4 (lower is better)
Translates to: SLLHKESLNWVREIHPLRGILAA*QIRTAP
Trigger: CGGGGCGGTTCTGATCTGGCAGGCAGCCAGGATCCC...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGCCTGGACTGCCCCATaGATCTTGGGCCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: SLLHKESLNWVREIHPLRAWTAP*ILGLRR
Trigger: CCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGC...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGCGATATGGTTCAGTGTaGCAGCCTGACGGACCCACA +
Preference number: 4 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQRYGSV*QPDGPT
Trigger: TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCG...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp GTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTTGGGTGATTCCCAGCTaGATCAGCTTGCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: VVVRLDAIVLQGHSTVEFWVIPS*ISLLLS
Trigger: GGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCA...AAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCTGGGTGATTCCCAGCTaGATCAGCTTGCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PLAVYISGSLETAEPAVPWVIPS*ISLLLS
Trigger: GGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCA...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATTGGGTGATTCCCAGCTaGATCAGCTTGCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYWVIPS*ISLLLS
Trigger: GGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCA...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTTGGGTGATTCCCAGCTaGATCAGCTTGCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PPLAVYISGSLETAEPAVWVIPS*ISLLLS
Trigger: GGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCA...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAAGGGAGGTCGTGGGCTaGCACCCCCAGGTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SLLHKESLNWVREIHPLRREVVG*HPQVAH
Trigger: GTGAGCTACCTGGGGGTGCCAGCCCACGACCTCCCT...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR CCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCTTGATGCTGTTTCTGTaGAGACTGAAGACAGTGGCT +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCLMLFL*RLKTVA
Trigger: AGCCACTGTCTTCAGTCTCCACAGAAACAGCATCAA...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR TCA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCTGTCTCCGCACACTTaGTGCTGTTTGCATCTCCTA +
Preference number: 4 (lower is better)
Translates to: PPLAVYISGSLETAEPAVLSPHT*CCLHLL
Trigger: TAGGAGATGCAAACAGCATCAAGTGTGCGGAGACAG...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308475.10
ENST00000607131.5
CDS-3UTR TCA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCACATTCACAACGTGGGTaGTTCCCAGCTGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: KESLNWVREIHPLRGHHPHSQRG*FPAGSA
Trigger: AGCTGATCCAGCTGGGAATCACCCACGTTGTGAATG...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCGCAGAAAGTAGACACTaGGGTCGAAGAAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: PLAVYISGSLETAEPAVPAESRH*GRRRGC
Trigger: ACAACCCCTTCTTCGACCTCAGTGTCTACTTTCTGC...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp GTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTTGTTCTCACAGATCATaGGGAAGGCCAGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: VVVRLDAIVLQGHSTVEFCSHRS*GRPGQV
Trigger: CACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACA...AAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp CGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCATGTTCTCACAGATCATaGGGAAGGCCAGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: RCHSTPGTFHGRIWHLCPCSHRS*GRPGQV
Trigger: CACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACA...TGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTTGTTCTCACAGATCATaGGGAAGGCCAGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: PPLAVYISGSLETAEPAVCSHRS*GRPGQV
Trigger: CACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACA...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCTGCATAAAGAATCTCTaGATTGGGTCAGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCCIKNL*IGSGKS
Trigger: GGATTTCCCTGACCCAATTCAGAGATTCTTTATGCA...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGTGTCCACCTGGAACTTaGCTGCAGCGGCATTCACAA +
Preference number: 4 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQCPPGT*LQRHSQ
Trigger: TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACA...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTTTCCACGGTAGAATTTaGCACCTGTGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: PPLAVYISGSLETAEPAVFHGRI*HLCPPG
Trigger: TCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAA...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAACCAGCACGCGGCCTTaGGGAACACTGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLLHKESLNWVREIHPLRTSTRP*GTLRAA
Trigger: AGCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGT...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGCAGAAAGTAGACACTaGGGTCGAAGAAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQAESRH*GRRRGC
Trigger: ACAACCCCTTCTTCGACCTCAGTGTCTACTTTCTGC...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAACCCACAGCAAGCGCTaGAGCGAAGCCAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: SLLHKESLNWVREIHPLRTHSKR*SEANVG
Trigger: GCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGT...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGCAGTTCGTGCTGCTaGCTTTCAGCCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SLLHKESLNWVREIHPLRGSSCC*LSAACL
Trigger: GAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCC...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR CCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGCAGCGAAGCCAATGTaGGCGGCTGGTAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: SLLHKESLNWVREIHPLRAAKPM*AAGREM
Trigger: CATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGC...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCATTCCACGGTAGAATTTaGCACCTGTGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: KESLNWVREIHPLRGHHPFHGRI*HLCPPG
Trigger: TCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAA...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAAGCGGCTTACCCCCATaGCACAGTGTACCAGCACGC +
Preference number: 4 (lower is better)
Translates to: SLLHKESLNWVREIHPLRSGLPP*HSVPAR
Trigger: GCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGCT...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp CTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGTGTGGCTTGATGCTGTTTCTGTaGAGACTGAAGACAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LYQRHVLTDHEEGQDKCGLMLFL*RLKTVA
Trigger: AGCCACTGTCTTCAGTCTCCACAGAAACAGCATCAA...GCCACACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR TCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGTGTTTGCATCTCCTATaGAAAGGTTGGGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQCLHLL*KGWAKL
Trigger: AAGTTTGGCCCAACCTTTTCATAGGAGATGCAAACA...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308475.10
ENST00000607131.5
CDS-3UTR TCA 90 bp GAGGGCAGCTCGGATGTATCGAGCAACAGGCAGAAAGTAGACACTGAGGTCGAATGCATAAAGAATCTCTaGATTGGGTCAGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: EGSSDVSSNRQKVDTEVECIKNL*IGSGKS
Trigger: GGATTTCCCTGACCCAATTCAGAGATTCTTTATGCA...TTCGACCTCAGTGTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCTGCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
CDS-3UTR TCA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGTGCATAAAGAATCTCTaGATTGGGTCAGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQCIKNL*IGSGKS
Trigger: GGATTTCCCTGACCCAATTCAGAGATTCTTTATGCA...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR GCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGACGGAGGTCCTGCTTCTaGAGTGAGTCCATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SLLHKESLNWVREIHPLRRRSCF*SESILW
Trigger: CCACAGGATGGACTCACTGCAGAAGCAGGACCTCCG...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR CCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGACCTGCACCGTCTGGATaGCCTCTACCAGCGTCATGT +
Preference number: 4 (lower is better)
Translates to: SLLHKESLNWVREIHPLRPAPSG*PLPASC
Trigger: ACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGG...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp GTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTTGTTTGCATCTCCTATaGAAAGGTTGGGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: VVVRLDAIVLQGHSTVEFCLHLL*KGWAKL
Trigger: AAGTTTGGCCCAACCTTTTCATAGGAGATGCAAACA...AAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308475.10
CDS-3UTR TCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGTCCTGCTTCTGCAGTaGGTCCATCCTGTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: SLLHKESLNWVREIHPLRVLLLQ*VHPVGV
Trigger: TACTCCCACAGGATGGACTCACTGCAGAAGCAGGAC...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR TCA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCTGCATAAAGAATCTCTaGATTGGGTCAGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: PLAVYISGSLETAEPAVPCIKNL*IGSGKS
Trigger: GGATTTCCCTGACCCAATTCAGAGATTCTTTATGCA...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGACGATATGGTTCAGTGTaGCAGCCTGACGGACCCACA +
Preference number: 4 (lower is better)
Translates to: SLLHKESLNWVREIHPLRRYGSV*QPDGPT
Trigger: TGTGGGTCCGTCAGGCTGCCACACTGAACCATATCG...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCATGCATAAAGAATCTCTaGATTGGGTCAGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: KESLNWVREIHPLRGHHPCIKNL*IGSGKS
Trigger: GGATTTCCCTGACCCAATTCAGAGATTCTTTATGCA...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR TCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGACTGTCTCCGCACACTTaGTGCTGTTTGCATCTCCTA +
Preference number: 4 (lower is better)
Translates to: SLLHKESLNWVREIHPLRLSPHT*CCLHLL
Trigger: TAGGAGATGCAAACAGCATCAAGTGTGCGGAGACAG...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308475.10
ENST00000607131.5
CDS-3UTR TCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGATGGCCGCATCTCCTATaGAAAGGTTGGGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: SLLHKESLNWVREIHPLRWPHLL*KGWAKL
Trigger: AAGTTTGGCCCAACCTTTTCATAGGAGATGCGGCCA...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR CCA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGATTCCACGGTAGAATTTaGCACCTGTGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: SLLHKESLNWVREIHPLRFHGRI*HLCPPG
Trigger: TCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAA...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp CGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGTACCAGCACGCGGCCTaGGGGAACACTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RPVSRPSRLSRTWSCRRKYQHAA*GNTEGS
Trigger: GCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGTA...CTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp CCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAATACCAGCACGCGGCCTaGGGGAACACTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PPRLPPQSVVQNLELPEEYQHAA*GNTEGS
Trigger: GCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGTA...TTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp ACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAGGGCAGGAAGGGCACTaGATGCCGGCCAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: TAPSPAPVGCPEPGAAGGGQEGH*MPAKPW
Trigger: CCATGGCTTGGCCGGCATCAAGTGCCCTTCCTGCCC...TCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494588.2
CDS-3UTR CAA 90 bp ACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAGCTCAAAGCGGTTGTTaGCCGTGGCCCTGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: TAPSPAPVGCPEPGAAGGAQSGC*PWPWGG
Trigger: CCCTCCCCAGGGCCACGGCAAACAACCGCTTTGAGC...TCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494588.2
CDS-3UTR CAA 90 bp CGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGTGGATCAGCTTGCTCTaGTCCCGGGCTGCGTACGCA +
Preference number: 5 (lower is better)
Translates to: RPVSRPSRLSRTWSCRRKWISLL*SRAAYA
Trigger: TGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCA...CTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp CCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTCCCGCCCCAGTCGGTaGTCCAGAACCTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: PDQNRPVSRPSRLSRTWSSRPSR*SRTWSC
Trigger: GCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGA...GCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp CCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCGTGTCCACCTGGAACTaGCCTGCAGCGGCATTCACA +
Preference number: 5 (lower is better)
Translates to: PRLPPQSVVQNLELPEEAVSTWN*PAAAFT
Trigger: TGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACAC...GGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp CCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGGTCGAAGAAGGGGTaGTCGTCCGCCTCGATGCCA +
Preference number: 5 (lower is better)
Translates to: PSPAPVGCPEPGAAGGSLRSKKG*SSASMP
Trigger: TGGCATCGAGGCGGACGACAACCCCTTCTTCGACCT...CAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS TCA 90 bp CGCCCTGACAGTAGAGGCCCTTGTGGGCGGCGTTCAGCACGTGGGTaGTGCCCAGCTTCCACAGCTCAAAGCGGTTGTTTGCCGTGGCCG +
Preference number: 5 (lower is better)
Translates to: RPDSRGPCGRRSARG*CPASTAQSGCLPWP
Trigger: CGGCCACGGCAAACAACCGCTTTGAGCTGTGGAAGCTGGGCATCACCCACGTGCTGAACGCCGCCCACAAGGGCCTCTACTGTCAGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607009.1
CDS TCA 90 bp CGCCCTGACAGTAGAGGCCCTTGTGGGCGGCGTTCAGCACGTGGGTaGTGCCCAGCTTCCACAGCTCAAAGCGGTTGTTTGCCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: RPDSRGPCGRRSARG*CPASTAQSGCLPWP
Trigger: GGGCCACGGCAAACAACCGCTTTGAGCTGTGGAAGCTGGGCATCACCCACGTGCTGAACGCCGCCCACAAGGGCCTCTACTGTCAGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494588.2
CDS CCA 90 bp ATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCTTCTGCAGTGAGTCCATCCCCCACG +
Preference number: 5 (lower is better)
Translates to: MWAAGREMPGLPHGS*ASGGPASAVSPSPT
Trigger: CGTGGGGGATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478873.7
ENST00000605915.5
CDS CCA 90 bp ATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCTTCTGCAGTGAGTCCATCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: MWAAGREMPGLPHGS*ASGGPASAVSPSPR
Trigger: CCTGGGGGATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607009.1
CDS-3UTR CAA 90 bp CTGACGGACCCACAGCAAGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGTGGATCAGCTTGCTCTaGTCCCGGGCTGCGTACGCA +
Preference number: 5 (lower is better)
Translates to: LTDPQQALQRSQCGRLVGWISLL*SRAAYA
Trigger: TGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCA...CCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGTCCGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp TGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCACCCCCAGCTGGATCAGCTaGCTCTTGTCCCGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: WSCRRKPELGQILRWACTPSWIS*LLSRAA
Trigger: CGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG...GGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp CTGACGGACCCACAGCAAGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGGTCGAAGAAGGGGTaGTCGTCCGCCTCGATGCCA +
Preference number: 5 (lower is better)
Translates to: LTDPQQALQRSQCGRLVGRSKKG*SSASMP
Trigger: TGGCATCGAGGCGGACGACAACCCCTTCTTCGACCT...CCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTGCTGTGGGTCCGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp TGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAAGGTCGAAGAAGGGGTaGTCGTCCGCCTCGATGCCA +
Preference number: 5 (lower is better)
Translates to: WAAGREMPGLPHGSWASGRSKKG*SSASMP
Trigger: TGGCATCGAGGCGGACGACAACCCCTTCTTCGACCT...TCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp GTAGCAGGCTCTAGGGCCGACCCCACGCTGGGCTTCCACCATCTTCTGTGTGTCTCCCGCCCCAGTCGGTaGTCCAGAACCTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: VAGSRADPTLGFHHLLCVSRPSR*SRTWSC
Trigger: GCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGA...GACACACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGCCCTAGAGCCTGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000494588.2
CDS-3UTR CAA 90 bp CTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTGGAGTTAGGGCAGATATaGCGGTGGGCCTGCACCGTC +
Preference number: 5 (lower is better)
Translates to: LVGRCLDCPMDLGPPEVLELGQI*RWACTV
Trigger: GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTC...CAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp CCCAGGCTGTGCACTTCTCTGACGGGCAGTTCGTGCTGCTGGCTTTCAGCCGCCGAGTTAGGGCAGATATaGCGGTGGGCCTGCACCGTC +
Preference number: 5 (lower is better)
Translates to: PRLCTSLTGSSCCWLSAAELGQI*RWACTV
Trigger: GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTC...GGCGGCTGAAAGCCAGCAGCACGAACTGCCCGTCAGAGAAGTGCACAGCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp TGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCACCTTGGCCCCAGGCGTGTaGAGGGCACGGTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: WSCRRKPELGQILRWACTLAPGV*RARWMK
Trigger: CTTCATCCACCGTGCCCTCAACACGCCTGGGGCCAA...GGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372702.7
CDS-3UTR CAA 90 bp CATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCGCCGGCACCCCGCAGTaGCTGGTCCAGCCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: HSTVEFGTCVHLELACSGAGTPQ*LVQPAE
Trigger: CTCTGCAGGCTGGACCAGCAACTGCGGGGTGCCGGC...GCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372702.7
CDS-3UTR CAA 90 bp TGGCAGGGAGTAAGGACCAGCTCCCCAGGCGTGTTGAGGGCACGGTGGATGAAGAGCTCCCCAGGCGTGTaGAGGGCACGGTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: WQGVRTSSPGVLRARWMKSSPGV*RARWMK
Trigger: CTTCATCCACCGTGCCCTCAACACGCCTGGGGAGCT...CTTCATCCACCGTGCCCTCAACACGCCTGGGGAGCTGGTCCTTACTCCCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494588.2
CDS TCA 90 bp CAGGCCCCACCCGGGTCAGGTAGCTTGTTTCAGGCATCTGCTGGCTaGAGGAGTCAGGGACCCTGCGGAGCTGGATTTTCAGCGGCACCA +
Preference number: 5 (lower is better)
Translates to: QAPPGSGSLFQASAG*RSQGPCGAGFSAAP
Trigger: TGGTGCCGCTGAAAATCCAGCTCCGCAGGGTCCCTGACTCCTTCAGCCAGCAGATGCCTGAAACAAGCTACCTGACCCGGGTGGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478873.7
CDS CCA 90 bp ATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTTaGGCCTCCGGAGGTCCTGCTTCTGCAGTGAGTCCATCGCATCTC +
Preference number: 5 (lower is better)
Translates to: MWAAGREMPGLPHGS*ASGGPASAVSPSHL
Trigger: GAGATGCGATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372700.7
CDS-3UTR CAA 90 bp TTTCTGTGGAGACTGAAGACAGTGGCTGAGAGGGGGTGTAGGCGCCAGGAGGAGACTGCCCCATGGATCTaGGGCCTCCGGAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: FLWRLKTVAERGCRRQEETAPWI*GLRRSC
Trigger: GCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGT...CTCCTCCTGGCGCCTACACCCCCTCTCAGCCACTGTCTTCAGTCTCCACAGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp GACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAAGCGCTGCCCAGCTGGATCAGCTaGCTCTTGTCCCGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: DLIDMVQCGSLTDPQQALPSWIS*LLSRAA
Trigger: CGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG...CAGCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp CCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTCCCTACCAGCACGCGGCCTaGGGGAACACTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PVSTWNLPAAAFTTWVIPYQHAA*GNTEGS
Trigger: GCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGTA...GGGAATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp GCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTGAGTTAGGGCAGATATaGCGGTGGGCCTGCACCGTC +
Preference number: 5 (lower is better)
Translates to: AKPMWAAGREMPGLPHGSELGQI*RWACTV
Trigger: GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTC...AGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp GACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAAGCGCTGTCCCGCCCCAGTCGGTaGTCCAGAACCTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: DLIDMVQCGSLTDPQQALSRPSR*SRTWSC
Trigger: GCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGA...CAGCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp CCAGATCAGAACCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCTCAGCCCCCACTaGCTGTTTACATCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: PDQNRPVSRPSRLSRTWSCLSPH*LFTSQG
Trigger: ACCCTGAGATGTAAACAGCAAGTGGGGGCTGAGGCA...GCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGGTTCTGATCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
CDS-3UTR CAA 90 bp CAAGCGCTGCAGCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCGCTCAAAGCGGTTGTTaGCCGTGGCCGCATCTCCTA +
Preference number: 5 (lower is better)
Translates to: QALQRSQCGRLVGRCLDCAQSGC*PWPHLL
Trigger: TAGGAGATGCGGCCACGGCAAACAACCGCTTTGAGC...GCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTGCAGCGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000479884.6
CDS-3UTR CAA 90 bp CGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGGCTCAAAGCGGTTGTTaGCCGTGGCCGCATCTCCTA +
Preference number: 5 (lower is better)
Translates to: RPSRLSRTWSCRRKPELGAQSGC*PWPHLL
Trigger: TAGGAGATGCGGCCACGGCAAACAACCGCTTTGAGC...CCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000479884.6
CDS-3UTR CAA 90 bp CCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGCCTGTCTCCGCACACTaGATGCTGTTTCTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: PSPAPVGCPEPGAAGGSLPVSAH*MLFLWR
Trigger: TCTCCACAGAAACAGCATCAAGTGTGCGGAGACAGG...CAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp GCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGACTGCCCCATGGATCTaGGGCCTCCGGAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: ACTVWMASTSVMFSQIMRTAPWI*GLRRSC
Trigger: GCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGT...CCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCCCCAGCTGGATCAGCTaGCTCTTGTCCCGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCPSWIS*LLSRAA
Trigger: CGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp ATATTGCGGTGGGCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACCCAGCTGGATCAGCTaGCTCTTGTCCCGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: ILRWACTVWMASTSVMFSPSWIS*LLSRAA
Trigger: CGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG...TGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCACCGCAATAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCTACCAGCACGCGGCCTaGGGGAACACTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCYQHAA*GNTEGS
Trigger: GCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGTA...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCTCCCGCCCCAGTCGGTaGTCCAGAACCTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCSRPSR*SRTWSC
Trigger: GCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGA...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GCCTGCACCGTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGTCCCGCCCCAGTCGGTaGTCCAGAACCTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: ACTVWMASTSVMFSQIMRSRPSR*SRTWSC
Trigger: GCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGA...CCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp GGCAGTTCGTGCTGCTGGCTTTCAGCCGCCTGTCTCCGCACACTTGATGCTGTTTGCAGGAAGCCTCGGTaGGGGAAGACCCATCGGTGC +
Preference number: 5 (lower is better)
Translates to: GSSCCWLSAACLRTLDAVCRKPR*GKTHRC
Trigger: GCACCGATGGGTCTTCCCCAACCGAGGCTTCCTGCA...AACAGCATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372702.7
CDS-3UTR CAA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTGCCGGCACCCCGCAGTaGCTGGTCCAGCCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: APTCCLHLRVTRNSRACCAGTPQ*LVQPAE
Trigger: CTCTGCAGGCTGGACCAGCAACTGCGGGGTGCCGGC...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000491677.6
CDS-3UTR CAA 90 bp TGCTGGCTTTCAGCCGCCTGTCTCCGCACACTTGATGCTGTTTCTGTGGAGACTACTGCCCCATGGATCTaGGGCCTCCGGAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: CWLSAACLRTLDAVSVETTAPWI*GLRRSC
Trigger: GCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGT...AGTCTCCACAGAAACAGCATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp GGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATAGGTCGAAGAAGGGGTaGTCGTCCGCCTCGATGCCA +
Preference number: 5 (lower is better)
Translates to: GTCVHLELACSGIHNVGDRSKKG*SSASMP
Trigger: TGGCATCGAGGCGGACGACAACCCCTTCTTCGACCT...ATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp TGGGCCAGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAGAGTTAGGGCAGATATaGCGGTGGGCCTGCACCGTC +
Preference number: 5 (lower is better)
Translates to: WARPHRYGSVWQPDGPTAELGQI*RWACTV
Trigger: GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTC...TGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp CCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCAGGAAGTGCCTCAGCCCCCACTaGCTGTTTACATCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: PSWISLLLSRAAYASPRKCLSPH*LFTSQG
Trigger: ACCCTGAGATGTAAACAGCAAGTGGGGGCTGAGGCA...CTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
CDS-3UTR CAA 90 bp GTGATTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGGCTGCGTACGCATCTCCCCACAGCTCAAAGCGGTaGTTTGCCGTGGCCGCATCT +
Preference number: 5 (lower is better)
Translates to: VIPSWISLLLSRAAYASPHSSKR*FAVAAS
Trigger: AGATGCGGCCACGGCAAACAACCGCTTTGAGCTGTG...GGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000479884.6
CDS-3UTR CAA 90 bp GCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTCACAGCTCAAAGCGGTaGTTTGCCGTGGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: APVSTWNLPAAAFTTWVIHSSKR*FAVALG
Trigger: CCCCAGGGCCACGGCAAACAACCGCTTTGAGCTGTG...AATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494588.2
CDS CCA 90 bp GAGTCAGGGACCCTGCGGAGCTGGATTTTCAGCGGCACCAGAATATaGGCCTGGTGCCGTGTTGGAGAGGGGGTCCTGTCTTTGCTAACT +
Preference number: 5 (lower is better)
Translates to: ESGTLRSWIFSGTRI*AWCRVGEGVLSLLT
Trigger: AGTTAGCAAAGACAGGACCCCCTCTCCAACACGGCACCAGGCCCATATTCTGGTGCCGCTGAAAATCCAGCTCCGCAGGGTCCCTGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478873.7
CDS CCA 90 bp GTTTCAGGCATCTGCTGGCTGAAGGAGTCAGGGACCCTGCGGAGCTaGATTTTCAGCGGCACCAGAATATGGGCCTGGTGCCGTGTTGGA +
Preference number: 5 (lower is better)
Translates to: VSGICWLKESGTLRS*IFSGTRIWAWCRVG
Trigger: TCCAACACGGCACCAGGCCCATATTCTGGTGCCGCTGAAAATCCAGCTCCGCAGGGTCCCTGACTCCTTCAGCCAGCAGATGCCTGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478873.7
CDS-3UTR CAA 90 bp GGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAAACTGCCCCATGGATCTaGGGCCTCCGGAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: GRIWHLCPPGTCLQRHSQTAPWI*GLRRSC
Trigger: GCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGT...TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTACTGCCCCATGGATCTaGGGCCTCCGGAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: APTCCLHLRVTRNSRACCTAPWI*GLRRSC
Trigger: GCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGT...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp ACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATTCCTGGATCAGCTTGCTCTaGTCCCGGGCTGCGTACGCA +
Preference number: 5 (lower is better)
Translates to: TCVHLELACSGIHNVGDSWISLL*SRAAYA
Trigger: TGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCA...GGAATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp CGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGTGGATCAGCTTGCTCTaGTCCCGGGCTGCGTACGCA +
Preference number: 5 (lower is better)
Translates to: RLSRTWSCRRKPELGQILWISLL*SRAAYA
Trigger: TGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCA...CAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCTGGATCAGCTTGCTCTaGTCCCGGGCTGCGTACGCA +
Preference number: 5 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCWISLL*SRAAYA
Trigger: TGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCA...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GGTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTCCCAGCTGGATCAGCTaGCTCTTGTCCCGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: GCRPPRCHSTPGTFHGRIPSWIS*LLSRAA
Trigger: CGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG...AATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTCCCAGCTGGATCAGCTaGCTCTTGTCCCGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: APTCCLHLRVTRNSRACCPSWIS*LLSRAA
Trigger: CGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCCCAGCTGGATCAGCTaGCTCTTGTCCCGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGPSWIS*LLSRAA
Trigger: CGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAAGCGCTGGTGTCCACCTGGAACTaGCCTGCAGCGGCATTCACA +
Preference number: 5 (lower is better)
Translates to: DLIDMVQCGSLTDPQQALVSTWN*PAAAFT
Trigger: TGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACAC...CAGCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp AGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAAGCGCTAGGTCGAAGAAGGGGTaGTCGTCCGCCTCGATGCCA +
Preference number: 5 (lower is better)
Translates to: RPHRYGSVWQPDGPTASARSKKG*SSASMP
Trigger: TGGCATCGAGGCGGACGACAACCCCTTCTTCGACCT...AGCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCAGGTCGAAGAAGGGGTaGTCGTCCGCCTCGATGCCA +
Preference number: 5 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCRSKKG*SSASMP
Trigger: TGGCATCGAGGCGGACGACAACCCCTTCTTCGACCT...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAATACCAGCACGCGGCCTaGGGGAACACTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GRIWHLCPPGTCLQRHSQYQHAA*GNTEGS
Trigger: GCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGTA...TTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGTACCAGCACGCGGCCTaGGGGAACACTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQYQHAA*GNTEGS
Trigger: GCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGTA...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp CGAAGAAGGGGTTGTCGTCCGCCTCGATGCCATAGTACTCCAGGGACATTCCACGAGTTAGGGCAGATATaGCGGTGGGCCTGCACCGTC +
Preference number: 5 (lower is better)
Translates to: RRRGCRPPRCHSTPGTFHELGQI*RWACTV
Trigger: GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTC...GTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGACGACAACCCCTTCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCGCCCCAGTCGGTaGTCCAGAACCTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: APTCCLHLRVTRNSRACCSRPSR*SRTWSC
Trigger: GCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGA...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GCGAAGCCAATGTGGGCGGCTGGTAGGGAGATGCCTGGACTGCCCCATGGATCTCCTGTCTCCGCACACTaGATGCTGTTTCTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: AKPMWAAGREMPGLPHGSPVSAH*MLFLWR
Trigger: TCTCCACAGAAACAGCATCAAGTGTGCGGAGACAGG...AGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCACTGCCCCATGGATCTaGGGCCTCCGGAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: PLAVYISGSLETAEPAVPTAPWI*GLRRSC
Trigger: GCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGT...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp AGCTCGGATGTATCGAGCAACAGGCAGAAAGTAGACACTGAGGTCGAAGAAGGGCCCAGCTGGATCAGCTaGCTCTTGTCCCGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: SSDVSSNRQKVDTEVEEGPSWIS*LLSRAA
Trigger: CGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGG...CCCTTCTTCGACCTCAGTGTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp CATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCGTGTCCACCTGGAACTaGCCTGCAGCGGCATTCACA +
Preference number: 5 (lower is better)
Translates to: HSTVEFGTCVHLELACSGVSTWN*PAAAFT
Trigger: TGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACAC...GCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTTACCAGCACGCGGCCTaGGGGAACACTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PPLAVYISGSLETAEPAVYQHAA*GNTEGS
Trigger: GCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGTA...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATTACCAGCACGCGGCCTaGGGGAACACTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYYQHAA*GNTEGS
Trigger: GCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGTA...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCGAGTTAGGGCAGATATaGCGGTGGGCCTGCACCGTC +
Preference number: 5 (lower is better)
Translates to: AVYISGSLETAEPAVPRAELGQI*RWACTV
Trigger: GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTC...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGTCCCGCCCCAGTCGGTaGTCCAGAACCTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LAVYISGSLETAEPAVPRSRPSR*SRTWSC
Trigger: GCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGA...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCTCCCGCCCCAGTCGGTaGTCCAGAACCTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: PLAVYISGSLETAEPAVPSRPSR*SRTWSC
Trigger: GCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGA...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCATTCACAACGTGGGTGATCCTGTCTCCGCACACTaGATGCTGTTTGCATCTCCT +
Preference number: 5 (lower is better)
Translates to: GTCVHLELACSGIHNVGDPVSAH*MLFASP
Trigger: AGGAGATGCAAACAGCATCAAGTGTGCGGAGACAGG...ATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308475.10
CDS-3UTR CAA 90 bp ATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAAACTGCCCCATGGATCTaGGGCCTCCGGAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: IVLQGHSTVEFGTCVHLETAPWI*GLRRSC
Trigger: GCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGT...TTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp AAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAACTGCCCCATGGATCTaGGGCCTCCGGAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: KESLNWVREIHPLRGHHPTAPWI*GLRRSC
Trigger: GCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGT...TGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp CTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGTGTGGCTGGATCAGCTTGCTCTaGTCCCGGGCTGCGTACGCA +
Preference number: 5 (lower is better)
Translates to: LYQRHVLTDHEEGQDKCGWISLL*SRAAYA
Trigger: TGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCA...GCCACACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGTGGATCAGCTTGCTCTaGTCCCGGGCTGCGTACGCA +
Preference number: 5 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQWISLL*SRAAYA
Trigger: TGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCA...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp TGCTGGCTTTCAGCCGCCTGTCTCCGCACACTTGATGCTGTTTCTGTGGAGACTGTGTCCACCTGGAACTaGCCTGCAGCGGCATTCACA +
Preference number: 5 (lower is better)
Translates to: CWLSAACLRTLDAVSVETVSTWN*PAAAFT
Trigger: TGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACAC...AGTCTCCACAGAAACAGCATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTAGGTCGAAGAAGGGGTaGTCGTCCGCCTCGATGCCA +
Preference number: 5 (lower is better)
Translates to: APTCCLHLRVTRNSRACCRSKKG*SSASMP
Trigger: TGGCATCGAGGCGGACGACAACCCCTTCTTCGACCT...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGTACCAGCACGCGGCCTaGGGGAACACTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQYQHAA*GNTEGS
Trigger: GCTGCCCTCAGTGTTCCCCAAGGCCGCGTGCTGGTA...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTGAGTTAGGGCAGATATaGCGGTGGGCCTGCACCGTC +
Preference number: 5 (lower is better)
Translates to: ESLNWVREIHPLRGHHPAELGQI*RWACTV
Trigger: GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTC...AGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTGAGTTAGGGCAGATATaGCGGTGGGCCTGCACCGTC +
Preference number: 5 (lower is better)
Translates to: APTCCLHLRVTRNSRACCELGQI*RWACTV
Trigger: GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTC...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCTGCCTCAGCCCCCACTaGCTGTTTACATCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCCLSPH*LFTSQG
Trigger: ACCCTGAGATGTAAACAGCAAGTGGGGGCTGAGGCA...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp CCGCCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGGACTGAACTCACTTTaGCATAAAGAATCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: PPRLPPQSVVQNLELPEEGLNSL*HKESLN
Trigger: ATTCAGAGATTCTTTATGCAAAAGTGAGTTCAGTCC...TTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
CDS-3UTR CAA 90 bp CCCCGTCTCCCGCCCCAGTCGGTTGTCCAGAACCTGGAGCTGCCGGAGGAAGCCGGACTGAACTCACTTTaGCATAAAGAATCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: PRLPPQSVVQNLELPEEAGLNSL*HKESLN
Trigger: ATTCAGAGATTCTTTATGCAAAAGTGAGTTCAGTCC...GGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGAGACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
CDS-3UTR CAA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCCACAGCTCAAAGCGGTaGTTTGCCGTGGCCGCATCT +
Preference number: 5 (lower is better)
Translates to: AVYISGSLETAEPAVPRAHSSKR*FAVAAS
Trigger: AGATGCGGCCACGGCAAACAACCGCTTTGAGCTGTG...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR CAA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATTGCAGGAAGCCTCGGTaGGGGAAGACCCATCGGTGC +
Preference number: 5 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYCRKPR*GKTHRC
Trigger: GCACCGATGGGTCTTCCCCAACCGAGGCTTCCTGCA...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000491677.6
CDS-3UTR CAA 90 bp CCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTAGCTCCCCAGGCGTGTaGAGGGCACGGTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: PRCHSTPGTFHGRIWHLCSSPGV*RARWMK
Trigger: CTTCATCCACCGTGCCCTCAACACGCCTGGGGAGCT...ACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGTGGATCAGCTTGCTCTaGTCCCGGGCTGCGTACGCA +
Preference number: 5 (lower is better)
Translates to: LAVYISGSLETAEPAVPRWISLL*SRAAYA
Trigger: TGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCA...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATTGGATCAGCTTGCTCTaGTCCCGGGCTGCGTACGCA +
Preference number: 5 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYWISLL*SRAAYA
Trigger: TGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCA...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTGTGTCCACCTGGAACTaGCCTGCAGCGGCATTCACA +
Preference number: 5 (lower is better)
Translates to: APTCCLHLRVTRNSRACCVSTWN*PAAAFT
Trigger: TGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACAC...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATAGGTCGAAGAAGGGGTaGTCGTCCGCCTCGATGCCA +
Preference number: 5 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYRSKKG*SSASMP
Trigger: TGGCATCGAGGCGGACGACAACCCCTTCTTCGACCT...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTGAGTTAGGGCAGATATaGCGGTGGGCCTGCACCGTC +
Preference number: 5 (lower is better)
Translates to: PPLAVYISGSLETAEPAVELGQI*RWACTV
Trigger: GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTC...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGTGCCTCAGCCCCCACTaGCTGTTTACATCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: VWMASTSVMFSQIMRKARCLSPH*LFTSQG
Trigger: ACCCTGAGATGTAAACAGCAAGTGGGGGCTGAGGCA...CCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
CDS-3UTR CAA 90 bp TGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCGCTCAAAGCGGTTGTTaGCCGTGGCCGCATCTCCTA +
Preference number: 5 (lower is better)
Translates to: CCLHLRVTRNSRACCSQGAQSGC*PWPHLL
Trigger: TAGGAGATGCGGCCACGGCAAACAACCGCTTTGAGC...GCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR CAA 90 bp CTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGACAAGTGTGGCCACAGCTCAAAGCGGTaGTTTGCCGTGGCCGCATCT +
Preference number: 5 (lower is better)
Translates to: LYQRHVLTDHEEGQDKCGHSSKR*FAVAAS
Trigger: AGATGCGGCCACGGCAAACAACCGCTTTGAGCTGTG...GCCACACTTGTCCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000479884.6
CDS-3UTR CAA 90 bp AGACCTCATCGATATGGTTCAGTGTGGCAGCCTGACGGACCCACAGCAAGCGCTCCTGTCTCCGCACACTaGATGCTGTTTCTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: RPHRYGSVWQPDGPTASAPVSAH*MLFLWR
Trigger: TCTCCACAGAAACAGCATCAAGTGTGCGGAGACAGG...AGCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp GGCAGTTCGTGCTGCTGGCTTTCAGCCGCCTGTCTCCGCACACTTGATGCTGTTTCTCCTATGAAAAGGTaGGGCCAAACTTCGTCCACA +
Preference number: 5 (lower is better)
Translates to: GSSCCWLSAACLRTLDAVSPMKR*GQTSST
Trigger: TGTGGACGAAGTTTGGCCCAACCTTTTCATAGGAGA...AACAGCATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCAGCAGCACGAACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATGTGTCCACCTGGAACTaGCCTGCAGCGGCATTCACA +
Preference number: 5 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYVSTWN*PAAAFT
Trigger: TGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACAC...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCGTGTCCACCTGGAACTaGCCTGCAGCGGCATTCACA +
Preference number: 5 (lower is better)
Translates to: PLAVYISGSLETAEPAVPVSTWN*PAAAFT
Trigger: TGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACAC...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp CTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGTGTCCACCTGGAACTaGCCTGCAGCGGCATTCACA +
Preference number: 5 (lower is better)
Translates to: LAVYISGSLETAEPAVPRVSTWN*PAAAFT
Trigger: TGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACAC...CCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGAGTTAGGGCAGATATaGCGGTGGGCCTGCACCGTC +
Preference number: 5 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQELGQI*RWACTV
Trigger: GACGGTGCAGGCCCACCGCAATATCTGCCCTAACTC...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GCCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTGCCTCAGCCCCCACTaGCTGTTTACATCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: APTCCLHLRVTRNSRACCCLSPH*LFTSQG
Trigger: ACCCTGAGATGTAAACAGCAAGTGGGGGCTGAGGCA...ACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCCCTGTCTCCGCACACTaGATGCTGTTTCTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: AVYISGSLETAEPAVPRAPVSAH*MLFLWR
Trigger: TCTCCACAGAAACAGCATCAAGTGTGCGGAGACAGG...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
CDS-3UTR CAA 90 bp CATTCCACGGTAGAATTTGGCACCTGTGTCCACCTGGAACTTGCCTGCAGCGGCTCTCCTATGAAAAGGTaGGGCCAAACTTCGTCCACA +
Preference number: 5 (lower is better)
Translates to: HSTVEFGTCVHLELACSGSPMKR*GQTSST
Trigger: TGTGGACGAAGTTTGGCCCAACCTTTTCATAGGAGA...GCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTCTACCGTGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCTGCCTCAGCCCCCACTaGCTGTTTACATCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: PLAVYISGSLETAEPAVPCLSPH*LFTSQG
Trigger: ACCCTGAGATGTAAACAGCAAGTGGGGGCTGAGGCA...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GTCTGGATGGCCTCTACCAGCGTCATGTTCTCACAGATCATGAGGAAGGCCAGGTCTCCTATGAAAAGGTaGGGCCAAACTTCGTCCACA +
Preference number: 5 (lower is better)
Translates to: VWMASTSVMFSQIMRKARSPMKR*GQTSST
Trigger: TGTGGACGAAGTTTGGCCCAACCTTTTCATAGGAGA...CCTGGCCTTCCTCATGATCTGTGAGAACATGACGCTGGTAGAGGCCATCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp ATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCTGTCTCCGCACACTaGATGCTGTTTGCATCTCCT +
Preference number: 5 (lower is better)
Translates to: ISELGQGNPPAKRSPPSYPVSAH*MLFASP
Trigger: AGGAGATGCAAACAGCATCAAGTGTGCGGAGACAGG...ATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308475.10
ENST00000607131.5
CDS-3UTR CAA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGATCCCGCCCCAGTCGGTaGTCCAGAACCTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SLLHKESLNWVREIHPLRSRPSR*SRTWSC
Trigger: GCAGCTCCAGGTTCTGGACAACCGACTGGGGCGGGA...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp ACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGTGCCTCAGCCCCCACTaGCTGTTTACATCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: TCCLHLRVTRNSRACCSQCLSPH*LFTSQG
Trigger: ACCCTGAGATGTAAACAGCAAGTGGGGGCTGAGGCA...CTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp TGGAGCTGCCGGAGGAAGCCTGAGTTAGGGCAGATATTGCGGTGGGCCTGCACCGGACTGAACTCACTTTaGCATAAAGAATCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: WSCRRKPELGQILRWACTGLNSL*HKESLN
Trigger: ATTCAGAGATTCTTTATGCAAAAGTGAGTTCAGTCC...GGTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
CDS-3UTR CAA 90 bp CCTCGATGCCATAGTACTCCAGGGACATTCCACGGTAGAATTTGGCACCTGTGTCCTGTCTCCGCACACTaGATGCTGTTTCTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: PRCHSTPGTFHGRIWHLCPVSAH*MLFLWR
Trigger: TCTCCACAGAAACAGCATCAAGTGTGCGGAGACAGG...ACACAGGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000394707.7
ENST00000479884.6
ENST00000494588.2
CDS-3UTR CAA 90 bp TGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCAGTCTCCTATGAAAAGGTaGGGCCAAACTTCGTCCACA +
Preference number: 5 (lower is better)
Translates to: CLHLRVTRNSRACCSQGQSPMKR*GQTSST
Trigger: TGTGGACGAAGTTTGGCCCAACCTTTTCATAGGAGA...CTGGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR CAA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGATTGGCCCCAGGCGTGTaGAGGGCACGGTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: SLLHKESLNWVREIHPLRLAPGV*RARWMK
Trigger: CTTCATCCACCGTGCCCTCAACACGCCTGGGGCCAA...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372702.7
ENST00000491677.6
CDS-3UTR CAA 90 bp CCCCCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTTCTCCTATGAAAAGGTaGGGCCAAACTTCGTCCACA +
Preference number: 5 (lower is better)
Translates to: PPLAVYISGSLETAEPAVSPMKR*GQTSST
Trigger: TGTGGACGAAGTTTGGCCCAACCTTTTCATAGGAGA...AACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607131.5
CDS-3UTR CAA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAAGGTCGAAGAAGGGGTaGTCGTCCGCCTCGATGCCA +
Preference number: 5 (lower is better)
Translates to: SLLHKESLNWVREIHPLRRSKKG*SSASMP
Trigger: TGGCATCGAGGCGGACGACAACCCCTTCTTCGACCT...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GAATTGGGTCAGGGAAATCCACCCGCTAAGAGGTCACCACCCAGCTATCCCTGCGGACTGAACTCACTTTaGCATAAAGAATCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: ELGQGNPPAKRSPPSYPCGLNSL*HKESLN
Trigger: ATTCAGAGATTCTTTATGCAAAAGTGAGTTCAGTCC...GCAGGGATAGCTGGGTGGTGACCTCTTAGCGGGTGGATTTCCCTGACCCAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp GCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCAGGGCCGGACTGAACTCACTTTaGCATAAAGAATCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: AVYISGSLETAEPAVPRAGLNSL*HKESLN
Trigger: ATTCAGAGATTCTTTATGCAAAAGTGAGTTCAGTCC...GGCCCTGGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp CCACTTGCTGTTTACATCTCAGGGTCACTAGAAACAGCAGAGCCTGCTGTTCCCGGACTGAACTCACTTTaGCATAAAGAATCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: PLAVYISGSLETAEPAVPGLNSL*HKESLN
Trigger: ATTCAGAGATTCTTTATGCAAAAGTGAGTTCAGTCC...GGGAACAGCAGGCTCTGCTGTTTCTAGTGACCCTGAGATGTAAACAGCAAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS-3UTR CAA 90 bp TCACTTTTGCATAAAGAATCTCTGAATTGGGTCAGGGAAATCCACCCGCTAAGAGGACTGAACTCACTTTaGCATAAAGAATCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: SLLHKESLNWVREIHPLRGLNSL*HKESLN
Trigger: ATTCAGAGATTCTTTATGCAAAAGTGAGTTCAGTCC...TCTTAGCGGGTGGATTTCCCTGACCCAATTCAGAGATTCTTTATGCAAAAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308475.10
ENST00000372702.7
ENST00000464872.5
ENST00000472493.6
ENST00000479884.6
ENST00000491677.6
ENST00000605915.5
ENST00000607131.5
CDS CCA 72 bp CTGGCCCCTCAGCTCTGGCCGGCACCCCGCAGTTGCTaGTCCAGCCTGCAGAGCTGGTGCAGGAAGCCTCGG +
Preference number: 6 (lower is better)
Translates to: LAPQLWPAPRSC*SSLQSWCRKPR
Trigger: CCGAGGCTTCCTGCACCAGCTCTGCAGGCTGGACCAGCAACTGCGGGGTGCCGGCCAGAGCTGAGGGGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000473072.2
ENST00000491677.6
ENST00000607487.5
CDS GCA 72 bp GCTCTGGCCCCTCAGCTCTGGCCGGCACCCCGCAGTTaGTGGTCCAGCCTGCAGAGCTGGTGCAGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: ALAPQLWPAPRS*WSSLQSWCRKP
Trigger: AGGCTTCCTGCACCAGCTCTGCAGGCTGGACCAGCAACTGCGGGGTGCCGGCCAGAGCTGAGGGGCCAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000473072.2
ENST00000491677.6
ENST00000607487.5
CDS CAA 90 bp GTAAGGACCAGCTCTGGCCCCTCAGCTCTGGCCGGCACCCCGCAGTaGCTGGTCCAGCCTGCAGAGCTGGTGCAGGAAGCCTCGGTTGGG +
Preference number: 6 (lower is better)
Translates to: VRTSSGPSALAGTPQ*LVQPAELVQEASVG
Trigger: CCCAACCGAGGCTTCCTGCACCAGCTCTGCAGGCTGGACCAGCAACTGCGGGGTGCCGGCCAGAGCTGAGGGGCCAGAGCTGGTCCTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000473072.2
ENST00000491677.6
ENST00000607487.5
CDS GCA 72 bp TGCAGGAAGCCTCGGTTGGGGAAGACCCATCGGTGCTaGCTCACGGTGATCACCGCCTGGCGCAGGGACAGC +
Preference number: 6 (lower is better)
Translates to: CRKPRLGKTHRC*LTVITAWRRDS
Trigger: GCTGTCCCTGCGCCAGGCGGTGATCACCGTGAGGCAGCACCGATGGGTCTTCCCCAACCGAGGCTTCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000473072.2
ENST00000491677.6
ENST00000607487.5
CDS GCA 72 bp TGGTGCAGGAAGCCTCGGTTGGGGAAGACCCATCGGTaGTGCCTCACGGTGATCACCGCCTGGCGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: WCRKPRLGKTHR*CLTVITAWRRD
Trigger: GTCCCTGCGCCAGGCGGTGATCACCGTGAGGCAGCACCGATGGGTCTTCCCCAACCGAGGCTTCCTGCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000473072.2
ENST00000491677.6
ENST00000607487.5
CDS CAA 90 bp CGCAGTTGCTGGTCCAGCCTGCAGAGCTGGTGCAGGAAGCCTCGGTaGGGGAAGACCCATCGGTGCTGCCTCACGGTGATCACCGCCTGG +
Preference number: 6 (lower is better)
Translates to: RSCWSSLQSWCRKPR*GKTHRCCLTVITAW
Trigger: CCAGGCGGTGATCACCGTGAGGCAGCACCGATGGGTCTTCCCCAACCGAGGCTTCCTGCACCAGCTCTGCAGGCTGGACCAGCAACTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000473072.2
ENST00000491677.6
ENST00000607487.5
CDS GCA 72 bp GCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTaGAGTGAGTCCATCCCCCACGACTCAGGCCAGCAC +
Preference number: 6 (lower is better)
Translates to: APWILGLRRSCF*SESIPHDSGQH
Trigger: GTGCTGGCCTGAGTCGTGGGGGATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478873.7
ENST00000605915.5
CDS CAA 90 bp GTGCCAGGACCAGAAAAAGAAACAGGCACCCAGGAGGCTGCCGGCTaGGCCAGGCTCACCCAGTGGGAGGCTGTCGGGCAAGGCGGAAGT +
Preference number: 6 (lower is better)
Translates to: VPGPEKETGTQEAAG*ARLTQWEAVGQGGS
Trigger: ACTTCCGCCTTGCCCGACAGCCTCCCACTGGGTGAGCCTGGCCAAGCCGGCAGCCTCCTGGGTGCCTGTTTCTTTTTCTGGTCCTGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478873.7
CDS TCA 72 bp CCAGCACGCGGCCTGCAGCGGCATTCACAACGTGGGTaGTTCCCAGCTGGATCAGCTTGCTCTTGTCCCGGG +
Preference number: 6 (lower is better)
Translates to: PARGLQRHSQRG*FPAGSACSCPG
Trigger: CCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCACGTTGTGAATGCCGCTGCAGGCCGCGTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464872.5
CDS GCA 72 bp GCCAGGACCAGAAAAAGAAACAGGCACCCAGGAGGCTaGCGGCTTGGCCAGGCTCACCCAGTGGGAGGCTGT +
Preference number: 6 (lower is better)
Translates to: ARTRKRNRHPGG*RLGQAHPVGGC
Trigger: ACAGCCTCCCACTGGGTGAGCCTGGCCAAGCCGGCAGCCTCCTGGGTGCCTGTTTCTTTTTCTGGTCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478873.7
CDS GCA 72 bp TGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATCCCCCACGACTCAGGC +
Preference number: 6 (lower is better)
Translates to: WTAPWILGLRRS*FCSESIPHDSG
Trigger: GCCTGAGTCGTGGGGGATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478873.7
ENST00000605915.5
CDS GCA 72 bp TGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATCCTGGGGCATGGCCTG +
Preference number: 6 (lower is better)
Translates to: WTAPWILGLRRS*FCSESILGHGL
Trigger: CAGGCCATGCCCCAGGATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472493.6
CDS CCA 72 bp ATCTGCTGGCTGAAGGAGTCAGGGACCCTGCGGAGCTaGATTTTCAGCGGCACCAGAATATGGGCCTGGTGC +
Preference number: 6 (lower is better)
Translates to: ICWLKESGTLRS*IFSGTRIWAWC
Trigger: GCACCAGGCCCATATTCTGGTGCCGCTGAAAATCCAGCTCCGCAGGGTCCCTGACTCCTTCAGCCAGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478873.7
CDS CAA 72 bp CGTGCTGCTGGCTTTCAGCCGCCTGTCTCCGCACACTaGATGCTGTTTCATCTTCTGTGTGTCCGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: RAAGFQPPVSAH*MLFHLLCVRLG
Trigger: GCCCAGGCGGACACACAGAAGATGAAACAGCATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCAGCAGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607487.5
CDS CCA 72 bp CGGAGCTGGATTTTCAGCGGCACCAGAATATGGGCCTaGTGCCGTGTTGGAGAGGGGGTCCTGTCTTTGCTA +
Preference number: 6 (lower is better)
Translates to: RSWIFSGTRIWA*CRVGEGVLSLL
Trigger: TAGCAAAGACAGGACCCCCTCTCCAACACGGCACCAGGCCCATATTCTGGTGCCGCTGAAAATCCAGCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478873.7
CDS CAA 72 bp GCTGTGCCTGGCCCCCTGGCATCTCCTATGAAAAGGTaGGGCCAAACTTCGTCCACACGGCTGCAAGAAGAC +
Preference number: 6 (lower is better)
Translates to: AVPGPLASPMKR*GQTSSTRLQED
Trigger: GTCTTCTTGCAGCCGTGTGGACGAAGTTTGGCCCAACCTTTTCATAGGAGATGCCAGGGGGCCAGGCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494588.2
CDS GCA 72 bp GCCCCATGGATCTTGGGCCTCCGGAGGTCCTGCTTCTaGAGTGAGTCCATCGCATCTCCTATGAAAAGGTTG +
Preference number: 6 (lower is better)
Translates to: APWILGLRRSCF*SESIASPMKRL
Trigger: CAACCTTTTCATAGGAGATGCGATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372700.7
CDS GCA 72 bp TGGACTGCCCCATGGATCTTGGGCCTCCGGAGGTCCTaGTTCTGCAGTGAGTCCATCGCATCTCCTATGAAA +
Preference number: 6 (lower is better)
Translates to: WTAPWILGLRRS*FCSESIASPMK
Trigger: TTTCATAGGAGATGCGATGGACTCACTGCAGAAGCAGGACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372700.7
CDS GCA 72 bp AGCTGGATTTTCAGCGGCACCAGAATATGGGCCTGGTaGCGTGTTGGAGAGGGGGTCCTGTCTTTGCTAACT +
Preference number: 6 (lower is better)
Translates to: SWIFSGTRIWAW*RVGEGVLSLLT
Trigger: AGTTAGCAAAGACAGGACCCCCTCTCCAACACGGCACCAGGCCCATATTCTGGTGCCGCTGAAAATCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478873.7
CDS CAA 72 bp CGGTTGTTTGCCGTGGCCGCATCTCCTATGAAAAGGTaGGGCCAAACTTCGTCCACACGGCTGCAAGAAGAC +
Preference number: 6 (lower is better)
Translates to: RLFAVAASPMKR*GQTSSTRLQED
Trigger: GTCTTCTTGCAGCCGTGTGGACGAAGTTTGGCCCAACCTTTTCATAGGAGATGCGGCCACGGCAAACAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607009.1
CDS CAA 72 bp ACGTGGGTGATGCCCAGCTTCCACAGCTCAAAGCGGTaGTTTGCCGTGGCCGCATCTCCTATGAAAAGGTTG +
Preference number: 6 (lower is better)
Translates to: TWVMPSFHSSKR*FAVAASPMKRL
Trigger: CAACCTTTTCATAGGAGATGCGGCCACGGCAAACAACCGCTTTGAGCTGTGGAAGCTGGGCATCACCCACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372702.7
ENST00000479884.6
ENST00000491677.6
ENST00000607009.1
CDS CAA 72 bp AGTGCACCAGGACCTTGGGCATCTCCTATGAAAAGGTaGGGCCAAACTTCGTCCACACGGCTGCAAGAAGAC +
Preference number: 6 (lower is better)
Translates to: SAPGPWASPMKR*GQTSSTRLQED
Trigger: GTCTTCTTGCAGCCGTGTGGACGAAGTTTGGCCCAACCTTTTCATAGGAGATGCCCAAGGTCCTGGTGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473072.2
ENST00000607487.5
CDS CAA 90 bp CCAGTGACTAGGGAAGGTGCATACTGGGAAGAACATCTTTTCCCTTaGGTAGGCAGTGCCAGGACCAGAAAAAGAAACAGGCACCCAGGA +
Preference number: 6 (lower is better)
Translates to: PVTREGAYWEEHLFP*VGSARTRKRNRHPG
Trigger: TCCTGGGTGCCTGTTTCTTTTTCTGGTCCTGGCACTGCCTACCAAAGGGAAAAGATGTTCTTCCCAGTATGCACCTTCCCTAGTCACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478873.7
CDS CAA 72 bp TTCTGCAGTGAGTCCATCGCATCTCCTATGAAAAGGTaGGGCCAAACTTCGTCCACACGGCTGCAAGAAGAC +
Preference number: 6 (lower is better)
Translates to: FCSESIASPMKR*GQTSSTRLQED
Trigger: GTCTTCTTGCAGCCGTGTGGACGAAGTTTGGCCCAACCTTTTCATAGGAGATGCGATGGACTCACTGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372700.7
CDS CAA 72 bp GCACACTTGATGCTGTTTGCATCTCCTATGAAAAGGTaGGGCCAAACTTCGTCCACACGGCTGCAAGAAGAC +
Preference number: 6 (lower is better)
Translates to: AHLMLFASPMKR*GQTSSTRLQED
Trigger: GTCTTCTTGCAGCCGTGTGGACGAAGTTTGGCCCAACCTTTTCATAGGAGATGCAAACAGCATCAAGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308475.10
ENST00000607131.5