Pregenerated sensors for DUSP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000120129Ensembl transcript IDs: ENST00000239223.4
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCGAGCAAAAAGAAACCGGATCACACACTGAGTCCTTTCTCTTCTaGCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGG | + |
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Preference number: 1 (lower is better) Translates to: GEQKETGSHTESFLF*PILSDGLDVPTIYW Trigger: CCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGTGTGTGATCCGGTTTCTTTTTGCTCGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| 3UTR-3UTR CCA 90 bp | CCGGATCACACACTGAGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGAGCATGGAGTCCCAATaGGATGTGAAGAGCCTCACC | + |
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Preference number: 2 (lower is better) Translates to: PDHTLSPFSSAPFCQMDLSMESQ*DVKSLT Trigger: GGTGAGGCTCTTCACATCCCATTGGGACTCCATGCT...CAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGTGTGTGATCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| 3UTR-3UTR TCA 90 bp | AGTTCAGCAAATGTCTTGACGCTAAGTCATCACCATAACTGCTTAGAAACCCAGAGTCCCAATGGGATGTaGAGAGCCTCACCTCCCGTG | + |
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Preference number: 2 (lower is better) Translates to: SSANVLTLSHHHNCLETQSPNGM*RASPPV Trigger: CACGGGAGGTGAGGCTCTTCACATCCCATTGGGACT...CTGGGTTTCTAAGCAGTTATGGTGATGACTTAGCGTCAAGACATTTGCTGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| 3UTR CAA 90 bp | CACACACTGAGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTaGATGTACCCACTATATATTGGTCCCGAATGTGCTGAGTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: HTLSPFSSAPFCQMD*MYPLYIGPECAEFS Trigger: GCTGAACTCAGCACATTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| 3UTR CAA 90 bp | ACCCACTATATATTGGTCCCGAATGTGCTGAGTTCAGCAAATGTCTaGACGCTAAGTCATCACCATAACTGCTTAGAAACCCAGAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: THYILVPNVLSSANV*TLSHHHNCLETQRN Trigger: GTTCCTCTGGGTTTCTAAGCAGTTATGGTGATGACTTAGCGTCAAGACATTTGCTGAACTCAGCACATTCGGGACCAATATATAGTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| 3UTR CAA 90 bp | AAAGAAACCGGATCACACACTGAGTCCTTTCTCTTCTGCCCCATTTaGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAATG | + |
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Preference number: 2 (lower is better) Translates to: KETGSHTESFLFCPI*SDGLDVPTIYWSRM Trigger: CATTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGTGTGTGATCCGGTTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| 3UTR-3UTR GCA 90 bp | TTCTCATATGTATATGTGTCGTCGGGAATAATACTGGTAGGTATGTCAAGCATGCCCTCCCAGAGTTATTaGATTTCTCCTCTCAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: FSYVYVSSGIILVGMSSMPSQSY*ISPLKE Trigger: CTCCTTGAGAGGAGAAATGCAATAACTCTGGGAGGG...CATGCTTGACATACCTACCAGTATTATTCCCGACGACACATATACATATGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| 3UTR-3UTR GCA 90 bp | AGGTATATTCTCATATGTATATGTGTCGTCGGGAATAATACTGGTAGGTATGTCGAGTCCTTTCTCTTCTaGCCCATTTTGTCAGATGGA | + |
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Preference number: 2 (lower is better) Translates to: RYILICICVVGNNTGRYVESFLF*PILSDG Trigger: TCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTC...GACATACCTACCAGTATTATTCCCGACGACACATATACATATGAGAATATACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| 3UTR-3UTR TCA 90 bp | AAATTGAGGTATTTGGTTCTTCTAGGAGTAGACAATGACATTTGTGAAGGCAGATTTGTCAGATGGACTTaGTGTACCCACTATATATTG | + |
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Preference number: 2 (lower is better) Translates to: KLRYLVLLGVDNDICEGRFVRWT*CTHYIL Trigger: CAATATATAGTGGGTACATCAAGTCCATCTGACAAA...TCTGCCTTCACAAATGTCATTGTCTACTCCTAGAAGAACCAAATACCTCAATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| 3UTR-3UTR CAA 90 bp | CCACTATATATTGGTCCCGAATGTGCTGAGTTCAGCAAATGTCTTGACGCTAAGCCCCTCCCAGAGTTATaGCATTTCTCCTCTCAAGGA | + |
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Preference number: 3 (lower is better) Translates to: PLYIGPECAEFSKCLDAKPLPEL*HFSSQG Trigger: TCCTTGAGAGGAGAAATGCAATAACTCTGGGAGGGG...CTTAGCGTCAAGACATTTGCTGAACTCAGCACATTCGGGACCAATATATAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| 3UTR TCA 72 bp | GTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTaGTGTACCCACTATATATTGGTCCCGAATGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: VLSLLPHFVRWT*CTHYILVPNVL Trigger: CAGCACATTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| 3UTR GCA 72 bp | AAAGAAACCGGATCACACACTGAGTCCTTTCTCTTCTaGCCCATTTTGTCAGATGGACTTGATGTACCCACT | + |
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Preference number: 3 (lower is better) Translates to: KETGSHTESFLF*PILSDGLDVPT Trigger: AGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGTGTGTGATCCGGTTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | GCCCTCTCGAGCCCCTCCCAGAGTTATTGCATTTCTCCTCTCAAGGAGCATGGAGCCTCTGCCGAACAGTaGGGAGCCAGCACCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: ALSSPSQSYCISPLKEHGASAEQ*GASTWD Trigger: GTCCCAGGTGCTGGCTCCGCACTGTTCGGCAGAGGC...TCCATGCTCCTTGAGAGGAGAAATGCAATAACTCTGGGAGGGGCTCGAGAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR TCA 90 bp | CCGGATCACACACTGAGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGGGGTGCCCACTTCCATaGCCATGGCCGGCCTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: PDHTLSPFSSAPFCQMDLGCPLP*PWPASA Trigger: CGCTGAGGCCGGCCATGGTCATGGAAGTGGGCACCC...CAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGTGTGTGATCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CCA 90 bp | TGTACCCACTATATATTGGTCCCGAATGTGCTGAGTTCAGCAAATGTCTTGACGTGTGCTCCAGGCCCATaGCGCCCTTGGCCCGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: CTHYILVPNVLSSANVLTCAPGP*RPWPGA Trigger: GGCGCCGGGCCAAGGGCGCCATGGGCCTGGAGCACA...CGTCAAGACATTTGCTGAACTCAGCACATTCGGGACCAATATATAGTGGGTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | ACTGAGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTTCCAGCAGCAGGCATTaGGCCGCTCGCTCCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TESFLFCPILSDGLDVPTSSSRH*AARSPS Trigger: GCTGGGGGAGCGAGCGGCGCAATGCCTGCTGCTGGA...AGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR TCA 90 bp | GCCCTCTCGAGCCCCTCCCAGAGTTATTGCATTTCTCCTCTCAAGGAGCATGGAAACCGGATCACACACTaGGTCCTTTCTCTTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: ALSSPSQSYCISPLKEHGNRITH*VLSLLP Trigger: GGGCAGAAGAGAAAGGACTCAGTGTGTGATCCGGTT...TCCATGCTCCTTGAGAGGAGAAATGCAATAACTCTGGGAGGGGCTCGAGAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | TGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAATGGCGTTGGGCACGATGTaGTCCAGGCCCATGGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: CPILSDGLDVPTIYWSRMALGTM*SRPMAP Trigger: GGGCGCCATGGGCCTGGAGCACATCGTGCCCAACGC...CATTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | TGTACCCACTATATATTGGTCCCGAATGTGCTGAGTTCAGCAAATGTCTTGACGCGTCCAGGGCGGCGCTaGGCTCGTCCAGCAACACCA | + |
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Preference number: 4 (lower is better) Translates to: CTHYILVPNVLSSANVLTRPGRR*ARPATP Trigger: TGGTGTTGCTGGACGAGCGCAGCGCCGCCCTGGACG...CGTCAAGACATTTGCTGAACTCAGCACATTCGGGACCAATATATAGTGGGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | TCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAAGGGGCTCCCAGCCTCTaGCGAACAGTGCGGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SAPFCQMDLMYPLYIGPEGAPSL*RTVRSQ Trigger: CTGGCTCCGCACTGTTCGGCAGAGGCTGGGAGCCCC...TTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | GGATCACACACTGAGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGATCGGTGGTGGTGGAGGTaGCTCGGTCGAGCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GSHTESFLFCPILSDGLDRWWWR*LGRAQP Trigger: TGGCTGTGCTCGACCGAGGCACCTCCACCACCACCG...ATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGTGTGTGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CCA 90 bp | TGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAATGCGCGGAGCTCGGCGTTaGGCACGATGTGCTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: CPILSDGLDVPTIYWSRMRGARR*ARCAPG Trigger: GCCTGGAGCACATCGTGCCCAACGCCGAGCTCCGCG...CATTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CCA 90 bp | CCGGATCACACACTGAGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGGCACTGTTCGTGGAGTaGACAGGGATGGAGACGGGG | + |
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Preference number: 4 (lower is better) Translates to: PDHTLSPFSSAPFCQMDLALFVE*TGMETG Trigger: CCCCGTCTCCATCCCTGTCCACTCCACGAACAGTGC...CAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGTGTGTGATCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR TCA 90 bp | GGATCACACACTGAGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGATCGATGTGGCCGGCGTTaGAAGCGAAGAAGGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: GSHTESFLFCPILSDGLDRCGRR*KRRRSG Trigger: GCCGCTCCTTCTTCGCTTTCAACGCCGGCCACATCG...ATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGTGTGTGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CCA 90 bp | AGTTCAGCAAATGTCTTGACGCTAAGTCATCACCATAACTGCTTAGAAACCCAGGGTCGAGCACAGCCATaGCGGGGCTCCCAGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SSANVLTLSHHHNCLETQGRAQP*RGSQPL Trigger: CAGAGGCTGGGAGCCCCGCCATGGCTGTGCTCGACC...CTGGGTTTCTAAGCAGTTATGGTGATGACTTAGCGTCAAGACATTTGCTGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | TGTACCCACTATATATTGGTCCCGAATGTGCTGAGTTCAGCAAATGTCTTGACGACCCCCGGGTCTCTCTaGGCCGAACCAAAAGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: CTHYILVPNVLSSANVLTTPGSL*AEPKAA Trigger: AGCGGCTTTTGGTTCGGCGCAGAGAGACCCGGGGGT...CGTCAAGACATTTGCTGAACTCAGCACATTCGGGACCAATATATAGTGGGTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | CCGGATCACACACTGAGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGCATCCAGCATGTCCTTaGGGGAAGCGTGATACGCAC | + |
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Preference number: 4 (lower is better) Translates to: PDHTLSPFSSAPFCQMDLHPACP*GKRDTH Trigger: GTGCGTATCACGCTTCCCGCAAGGACATGCTGGATG...CAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGTGTGTGATCCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR TCA 90 bp | AGGTATATTCTCATATGTATATGTGTCGTCGGGAATAATACTGGTAGGTATGTCTCAGCGCCCCCAGCGTaGTCGGCCCTGCGGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: RYILICICVVGNNTGRYVSAPPA*SALRCS Trigger: AGAGCACCGCAGGGCCGATCACGCTGGGGGCGCTGA...GACATACCTACCAGTATTATTCCCGACGACACATATACATATGAGAATATACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CCA 90 bp | AGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATGAGCCTCACCTCCCGTaGCCTTTCAGCAGCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SPFSSAPFCQMDLMYPLYEPHLP*PFSSWE Trigger: CTCCCAGCTGCTGAAAGGCCACGGGAGGTGAGGCTC...ATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR TCA 90 bp | AGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATTCCTTGCGGGAAGCGTaGTACGCACTGCCCAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SPFSSAPFCQMDLMYPLYSLREA*YALPRY Trigger: GTACCTGGGCAGTGCGTATCACGCTTCCCGCAAGGA...ATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | TGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAATGGGGTACTGCAGGAACTaGACCCAGATTCCGCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: CPILSDGLDVPTIYWSRMGYCRN*TQIPRC Trigger: ACAGCGCGGAATCTGGGTGCAGTTCCTGCAGTACCC...CATTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | TCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAATGGCTGACCGGGAAATaGCTGCCTGGCAGTGGACAA | + |
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Preference number: 4 (lower is better) Translates to: SAPFCQMDLMYPLYIGPEWLTGK*LPGSGQ Trigger: TTGTCCACTGCCAGGCAGGCATTTCCCGGTCAGCCA...TTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CCA 90 bp | AGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATACAGAGCCGGCGATGTaGCCGGCGTTGAAAGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: SPFSSAPFCQMDLMYPLYTEPAM*PALKAK Trigger: CTTCGCTTTCAACGCCGGCCACATCGCCGGCTCTGT...ATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CCA 90 bp | ACTGAGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTGGTAAGCAAGGCAGATaGTGGCTGACCGGGAAATGC | + |
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Preference number: 4 (lower is better) Translates to: TESFLFCPILSDGLDVPTGKQGR*WLTGKC Trigger: GCATTTCCCGGTCAGCCACCATCTGCCTTGCTTACC...AGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | AGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATCAGCGTGATCGGCCCTaGGGTGCTCTTTGTCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: SPFSSAPFCQMDLMYPLYQRDRP*GALCLF Trigger: GAACAGACAAAGAGCACCGCAGGGCCGATCACGCTG...ATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CCA 90 bp | TGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAATGCGGGAAATGCCTGCCTaGCAGTGGACAAACACCCTT | + |
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Preference number: 4 (lower is better) Translates to: CPILSDGLDVPTIYWSRMREMPA*QWTNTL Trigger: AAGGGTGTTTGTCCACTGCCAGGCAGGCATTTCCCG...CATTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CCA 90 bp | TGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAATGTCAGCGCACTGTTCGTaGAGTGGACAGGGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: CPILSDGLDVPTIYWSRMSAHCS*SGQGWR Trigger: TCTCCATCCCTGTCCACTCCACGAACAGTGCGCTGA...CATTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR TCA 90 bp | TGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAATGCTTCGTATCCTCCTTTaGGGAAGAAGACTTGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: CPILSDGLDVPTIYWSRMLRILL*GRRLAR Trigger: CCGCGCAAGTCTTCTTCCTCAAAGGAGGATACGAAG...CATTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | TTCTCATATGTATATGTGTCGTCGGGAATAATACTGGTAGGTATGTCAAGCATGGGGTCGACTGTTTGCTaGACAGCTCCGGGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: FSYVYVSSGIILVGMSSMGSTVC*TAPGRK Trigger: CTTCCTGCCCGGAGCTGTGCAGCAAACAGTCGACCC...CATGCTTGACATACCTACCAGTATTATTCCCGACGACACATATACATATGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | AGGTATATTCTCATATGTATATGTGTCGTCGGGAATAATACTGGTAGGTATGTCTGGGGGTCGACTGTTTaGTGCACAGCTCCGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RYILICICVVGNNTGRYVWGSTV*CTAPGR Trigger: CCTGCCCGGAGCTGTGCAGCAAACAGTCGACCCCCA...GACATACCTACCAGTATTATTCCCGACGACACATATACATATGAGAATATACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | TCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAAAAGCGTGATACGCACTaGCCAGGTACAGAAAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SAPFCQMDLMYPLYIGPEKRDTH*PGTERA Trigger: TGCCCTTTCTGTACCTGGGCAGTGCGTATCACGCTT...TTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CCA 90 bp | TCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAAACCCTGATCGTAGAGTaGGGTACTGCAGGAACTGCA | + |
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Preference number: 4 (lower is better) Translates to: SAPFCQMDLMYPLYIGPETLIVE*GTAGTA Trigger: TGCAGTTCCTGCAGTACCCCACTCTACGATCAGGGT...TTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR TCA 90 bp | AGGTATATTCTCATATGTATATGTGTCGTCGGGAATAATACTGGTAGGTATGTCAAGCCGCTTTTGGACTaGGAGAGGAGCGTCACGCGG | + |
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Preference number: 4 (lower is better) Translates to: RYILICICVVGNNTGRYVKPLLD*ERSVTR Trigger: CCGCGTGACGCTCCTCTCTCAGTCCAAAAGCGGCTT...GACATACCTACCAGTATTATTCCCGACGACACATATACATATGAGAATATACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | AGTTCAGCAAATGTCTTGACGCTAAGTCATCACCATAACTGCTTAGAAACCCAGCGTAGAGTGGGGTACTaGAGGAACTGCACCCAGATT | + |
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Preference number: 4 (lower is better) Translates to: SSANVLTLSHHHNCLETQRRVGY*RNCTQI Trigger: AATCTGGGTGCAGTTCCTGCAGTACCCCACTCTACG...CTGGGTTTCTAAGCAGTTATGGTGATGACTTAGCGTCAAGACATTTGCTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | TGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAATGTGTCCTCCACAGGGATaGTCTTGTACTGGTAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: CPILSDGLDVPTIYWSRMCPPQG*SCTGSD Trigger: GTCACTACCAGTACAAGAGCATCCCTGTGGAGGACA...CATTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | ACTGAGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATGATGCTTCGCCTCTaGTTCACAAACTCAAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TESFLFCPILSDGLDVPTMMLRL*FTNSKA Trigger: GGCCTTTGAGTTTGTGAAGCAGAGGCGAAGCATCAT...AGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CCA 90 bp | AGTTCAGCAAATGTCTTGACGCTAAGTCATCACCATAACTGCTTAGAAACCCAGAGCATGGAGTCCCAATaGGATGTGAAGAGCCTCACC | + |
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Preference number: 4 (lower is better) Translates to: SSANVLTLSHHHNCLETQSMESQ*DVKSLT Trigger: GGTGAGGCTCTTCACATCCCATTGGGACTCCATGCT...CTGGGTTTCTAAGCAGTTATGGTGATGACTTAGCGTCAAGACATTTGCTGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR TCA 90 bp | AGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATGTTGGGACAATTGGCTaGGACGTTGATCAAGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SPFSSAPFCQMDLMYPLYVGTIG*DVDQGS Trigger: ACTGCCTTGATCAACGTCTCAGCCAATTGTCCCAAC...ATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR TCA 90 bp | AAATTGAGGTATTTGGTTCTTCTAGGAGTAGACAATGACATTTGTGAAGGCAGAAGTCCCAATGGGATGTaGAGAGCCTCACCTCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: KLRYLVLLGVDNDICEGRSPNGM*RASPPV Trigger: CACGGGAGGTGAGGCTCTTCACATCCCATTGGGACT...TCTGCCTTCACAAATGTCATTGTCTACTCCTAGAAGAACCAAATACCTCAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CCA 90 bp | AGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATACCAAAAGCCGCTTTTaGACTGAGAGAGGAGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: SPFSSAPFCQMDLMYPLYTKSRF*TERGAS Trigger: TGACGCTCCTCTCTCAGTCCAAAAGCGGCTTTTGGT...ATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CCA 90 bp | TGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAATGGACCCTCAAAATGGTTaGGACAATTGGCTGAGACGT | + |
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Preference number: 4 (lower is better) Translates to: CPILSDGLDVPTIYWSRMDPQNG*DNWLRR Trigger: ACGTCTCAGCCAATTGTCCCAACCATTTTGAGGGTC...CATTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | AGTTCAGCAAATGTCTTGACGCTAAGTCATCACCATAACTGCTTAGAAACCCAGCCCTCCCAGAGTTATTaGATTTCTCCTCTCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SSANVLTLSHHHNCLETQPSQSY*ISPLKE Trigger: CTCCTTGAGAGGAGAAATGCAATAACTCTGGGAGGG...CTGGGTTTCTAAGCAGTTATGGTGATGACTTAGCGTCAAGACATTTGCTGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR GCA 90 bp | TGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAATGGAGTCCTTTCTCTTCTaGCCCATTTTGTCAGATGGA | + |
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Preference number: 4 (lower is better) Translates to: CPILSDGLDVPTIYWSRMESFLF*PILSDG Trigger: TCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTC...CATTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CCA 90 bp | AGGTATATTCTCATATGTATATGTGTCGTCGGGAATAATACTGGTAGGTATGTCATGCCTGCCTGGCAGTaGACAAACACCCTTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RYILICICVVGNNTGRYVMPAWQ*TNTLPP Trigger: TGGAGGAAGGGTGTTTGTCCACTGCCAGGCAGGCAT...GACATACCTACCAGTATTATTCCCGACGACACATATACATATGAGAATATACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| 3UTR CAA 72 bp | AGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTaGATGTACCCACTATATATTGGTCCCGAATGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SPFSSAPFCQMD*MYPLYIGPECA Trigger: AGCACATTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| 3UTR CAA 72 bp | GGATCACACACTGAGTCCTTTCTCTTCTGCCCCATTTaGTCAGATGGACTTGATGTACCCACTATATATTGG | + |
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Preference number: 4 (lower is better) Translates to: GSHTESFLFCPI*SDGLDVPTIYW Trigger: CCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGTGTGTGATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| 3UTR CAA 72 bp | ATATTGGTCCCGAATGTGCTGAGTTCAGCAAATGTCTaGACGCTAAGTCATCACCATAACTGCTTAGAAACC | + |
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Preference number: 4 (lower is better) Translates to: ILVPNVLSSANV*TLSHHHNCLET Trigger: GGTTTCTAAGCAGTTATGGTGATGACTTAGCGTCAAGACATTTGCTGAACTCAGCACATTCGGGACCAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR TCA 90 bp | ACTGAGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTTTTGTCAGATGGACTTaGTGTACCCACTATATATTG | + |
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Preference number: 4 (lower is better) Translates to: TESFLFCPILSDGLDVPTFVRWT*CTHYIL Trigger: CAATATATAGTGGGTACATCAAGTCCATCTGACAAA...AGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS CCA 90 bp | CGCGGCAGAGCGCGCCGGCCGCCAGGGCCAGGGTGCCGTCGCGCTTaGCGCCGTCCAGGGCGGCGCTGCGCTCGTCCAGCAACACCACGG | + |
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Preference number: 5 (lower is better) Translates to: RGRARRPPGPGCRRA*RRPGRRCARPATPR Trigger: CCGTGGTGTTGCTGGACGAGCGCAGCGCCGCCCTGGACGGCGCCAAGCGCGACGGCACCCTGGCCCTGGCGGCCGGCGCGCTCTGCCGCG 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS GCA 90 bp | CCAGGGCCAGGGTGCCGTCGCGCTTGGCGCCGTCCAGGGCGGCGCTaGGCTCGTCCAGCAACACCACGGCGTGGTAGGCGCCGGCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: PGPGCRRAWRRPGRR*ARPATPRRGRRRPA Trigger: TGCTGGCCGGCGCCTACCACGCCGTGGTGTTGCTGGACGAGCGCAGCGCCGCCCTGGACGGCGCCAAGCGCGACGGCACCCTGGCCCTGG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS GCA 90 bp | CACGCGGGGCTCCGGGCTCCTCGGCTTCTTCGCGGTTCCCCCGACTaGCCCTCCGACCCGCGTCGCACACACAGCCCAAATGTCCTTCGC | + |
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Preference number: 5 (lower is better) Translates to: HAGLRAPRLLRGSPD*PSDPRRTHSPNVLR Trigger: GCGAAGGACATTTGGGCTGTGTGTGCGACGCGGGTCGGAGGGGCAGTCGGGGGAACCGCGAAGAAGCCGAGGAGCCCGGAGCCCCGCGTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS GCA 90 bp | TTCCATGACCATGGCCGGCCTCAGCGCCCCCAGCGTGATCGGCCCTaGGGTGCTCTTTGTCTGTTCTCGGGGCCAAGGGCAGGGCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: FHDHGRPQRPQRDRP*GALCLFSGPRAGRR Trigger: GCGCCGCCCTGCCCTTGGCCCCGAGAACAGACAAAGAGCACCGCAGGGCCGATCACGCTGGGGGCGCTGAGGCCGGCCATGGTCATGGAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS GCA 90 bp | CAGGAAGCCGAAAACGCTTCGTATCCTCCTTTGAGGAAGAAGACTTaGGCGGCGCGCGCCTCGCGGCAGAGCGCGCCGGCCGCCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: QEAENASYPPLRKKT*AARASRQSAPAARA Trigger: GGCCCTGGCGGCCGGCGCGCTCTGCCGCGAGGCGCGCGCCGCGCAAGTCTTCTTCCTCAAAGGAGGATACGAAGCGTTTTCGGCTTCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS TCA 90 bp | TCAGCGCACTGTTCGTGGAGTGGACAGGGATGGAGACGGGGAAGTTaGACACGGTGGTGGTGGAGGTGCCTCGGTCGAGCACAGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SAHCSWSGQGWRRGS*TRWWWRCLGRAQPW Trigger: CCATGGCTGTGCTCGACCGAGGCACCTCCACCACCACCGTGTTCAACTTCCCCGTCTCCATCCCTGTCCACTCCACGAACAGTGCGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CAA 90 bp | GCCCTCTCGAGCCCCTCCCAGAGTTATTGCATTTCTCCTCTCAAGGAGCATGGAGTCCAGCAGCAGGCATaGCGCCGCTCGCTCCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: ALSSPSQSYCISPLKEHGVQQQA*RRSLPQ Trigger: CTGGGGGAGCGAGCGGCGCAATGCCTGCTGCTGGAC...TCCATGCTCCTTGAGAGGAGAAATGCAATAACTCTGGGAGGGGCTCGAGAGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CAA 90 bp | CCGGATCACACACTGAGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGCCGCGGAGCTCGGCGTaGGGCACGATGTGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PDHTLSPFSSAPFCQMDLPRSSA*GTMCSR Trigger: CCTGGAGCACATCGTGCCCAACGCCGAGCTCCGCGG...CAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGTGTGTGATCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS TCA 90 bp | TTATTGCATTTCTCCTCTCAAGGAGCATGGAGTCCCAATGGGATGTaGAGAGCCTCACCTCCCGTGGCCTTTCAGCAGCTGGGAGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: LLHFSSQGAWSPNGM*RASPPVAFQQLGEV Trigger: GACCTCTCCCAGCTGCTGAAAGGCCACGGGAGGTGAGGCTCTTCACATCCCATTGGGACTCCATGCTCCTTGAGAGGAGAAATGCAATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CAA 90 bp | TGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAATGGCGATGTGGCCGGCGTaGAAAGCGAAGAAGGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CPILSDGLDVPTIYWSRMAMWPA*KAKKER Trigger: CCGCTCCTTCTTCGCTTTCAACGCCGGCCACATCGC...CATTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CAA 90 bp | TCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAAATGGGGGTCGACTGTTaGCTGCACAGCTCCGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SAPFCQMDLMYPLYIGPEMGVDC*LHSSGQ Trigger: CTGCCCGGAGCTGTGCAGCAAACAGTCGACCCCCAT...TTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CAA 90 bp | AGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATGCCCTGCGGTGCTCTTaGTCTGTTCTCGGGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPFSSAPFCQMDLMYPLYALRCS*SVLGAK Trigger: CTTGGCCCCGAGAACAGACAAAGAGCACCGCAGGGC...ATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CAA 90 bp | GCCCTCTCGAGCCCCTCCCAGAGTTATTGCATTTCTCCTCTCAAGGAGCATGGACTCTTCTGCCCCATTTaGTCAGATGGACTTGATGTA | + |
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Preference number: 5 (lower is better) Translates to: ALSSPSQSYCISPLKEHGLFCPI*SDGLDV Trigger: TACATCAAGTCCATCTGACAAAATGGGGCAGAAGAG...TCCATGCTCCTTGAGAGGAGAAATGCAATAACTCTGGGAGGGGCTCGAGAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CAA 90 bp | CCGGATCACACACTGAGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGCCCCTCCCAGAGTTATaGCATTTCTCCTCTCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: PDHTLSPFSSAPFCQMDLPLPEL*HFSSQG Trigger: TCCTTGAGAGGAGAAATGCAATAACTCTGGGAGGGG...CAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGTGTGTGATCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CAA 90 bp | AGGTATATTCTCATATGTATATGTGTCGTCGGGAATAATACTGGTAGGTATGTCGTGCTGAAGCGCACGTaGACAGAGCCGGCGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RYILICICVVGNNTGRYVVLKRT*TEPAMW Trigger: CCACATCGCCGGCTCTGTCAACGTGCGCTTCAGCAC...GACATACCTACCAGTATTATTCCCGACGACACATATACATATGAGAATATACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CAA 90 bp | TGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAATGGCTTCGTATCCTCCTTaGAGGAAGAAGACTTGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: CPILSDGLDVPTIYWSRMASYPP*RKKTCA Trigger: CGCGCAAGTCTTCTTCCTCAAAGGAGGATACGAAGC...CATTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CAA 90 bp | ACTGAGTCCTTTCTCTTCTGCCCCATTTTGTCAGATGGACTTGATGTACCCACTAAGGCCTCGTCCAGCTaGACTCGATTAGTCCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: TESFLFCPILSDGLDVPTKASSS*TRLVLI Trigger: TATGAGGACTAATCGAGTCAAGCTGGACGAGGCCTT...AGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAGAAAGGACTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CAA 90 bp | TGTACCCACTATATATTGGTCCCGAATGTGCTGAGTTCAGCAAATGTCTTGACGAAATGGTTGGGACAATaGGCTGAGACGTTGATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CTHYILVPNVLSSANVLTKWLGQ*AETLIK Trigger: CTTGATCAACGTCTCAGCCAATTGTCCCAACCATTT...CGTCAAGACATTTGCTGAACTCAGCACATTCGGGACCAATATATAGTGGGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CAA 90 bp | TGCCCCATTTTGTCAGATGGACTTGATGTACCCACTATATATTGGTCCCGAATGCTTCCTCCAGCATTCTaGATGGAGTCTATGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CPILSDGLDVPTIYWSRMLPPAF*MESMKS Trigger: TGACTTCATAGACTCCATCAAGAATGCTGGAGGAAG...CATTCGGGACCAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CAA 90 bp | TTCTCATATGTATATGTGTCGTCGGGAATAATACTGGTAGGTATGTCAAGCATGAGTTCAGCAAATGTCTaGACGCTAAGTCATCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: FSYVYVSSGIILVGMSSMSSANV*TLSHHH Trigger: ATGGTGATGACTTAGCGTCAAGACATTTGCTGAACT...CATGCTTGACATACCTACCAGTATTATTCCCGACGACACATATACATATGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CAA 90 bp | AGGTATATTCTCATATGTATATGTGTCGTCGGGAATAATACTGGTAGGTATGTCTGTACCCACTATATATaGGTCCCGAATGTGCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RYILICICVVGNNTGRYVCTHYI*VPNVLS Trigger: ACTCAGCACATTCGGGACCAATATATAGTGGGTACA...GACATACCTACCAGTATTATTCCCGACGACACATATACATATGAGAATATACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS-3UTR CAA 90 bp | AGGTATATTCTCATATGTATATGTGTCGTCGGGAATAATACTGGTAGGTATGTCCAAAAATTGAGGTATTaGGTTCTTCTAGGAGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RYILICICVVGNNTGRYVQKLRY*VLLGVD Trigger: GTCTACTCCTAGAAGAACCAAATACCTCAATTTTTG...GACATACCTACCAGTATTATTCCCGACGACACATATACATATGAGAATATACCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS CAA 90 bp | TCGCGGCAGAGCGCGCCGGCCGCCAGGGCCAGGGTGCCGTCGCGCTaGGCGCCGTCCAGGGCGGCGCTGCGCTCGTCCAGCAACACCACG | + |
|
Preference number: 6 (lower is better) Translates to: SRQSAPAARARVPSR*APSRAALRSSSNTT Trigger: CGTGGTGTTGCTGGACGAGCGCAGCGCCGCCCTGGACGGCGCCAAGCGCGACGGCACCCTGGCCCTGGCGGCCGGCGCGCTCTGCCGCGA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS CCA 72 bp | CGGTGGTGGTGGAGGTGCCTCGGTCGAGCACAGCCATaGCGGGGCTCCCAGCCTCTGCCGAACAGTGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RWWWRCLGRAQP*RGSQPLPNSAE Trigger: CTCCGCACTGTTCGGCAGAGGCTGGGAGCCCCGCCATGGCTGTGCTCGACCGAGGCACCTCCACCACCACCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS CAA 90 bp | GCAGGAAGCCGAAAACGCTTCGTATCCTCCTTTGAGGAAGAAGACTaGCGCGGCGCGCGCCTCGCGGCAGAGCGCGCCGGCCGCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AGSRKRFVSSFEEED*RGARLAAERAGRQG Trigger: GCCCTGGCGGCCGGCGCGCTCTGCCGCGAGGCGCGCGCCGCGCAAGTCTTCTTCCTCAAAGGAGGATACGAAGCGTTTTCGGCTTCCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS GCA 72 bp | CTCCGGGCTCCTCGGCTTCTTCGCGGTTCCCCCGACTaGCCCTCCGACCCGCGTCGCACACACAGCCCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LRAPRLLRGSPD*PSDPRRTHSPN Trigger: ATTTGGGCTGTGTGTGCGACGCGGGTCGGAGGGGCAGTCGGGGGAACCGCGAAGAAGCCGAGGAGCCCGGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS GCA 72 bp | CATGGCCGGCCTCAGCGCCCCCAGCGTGATCGGCCCTaGGGTGCTCTTTGTCTGTTCTCGGGGCCAAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HGRPQRPQRDRP*GALCLFSGPRA Trigger: TGCCCTTGGCCCCGAGAACAGACAAAGAGCACCGCAGGGCCGATCACGCTGGGGGCGCTGAGGCCGGCCATG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS GCA 72 bp | GAAAACGCTTCGTATCCTCCTTTGAGGAAGAAGACTTaGGCGGCGCGCGCCTCGCGGCAGAGCGCGCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ENASYPPLRKKT*AARASRQSAPA Trigger: GGCCGGCGCGCTCTGCCGCGAGGCGCGCGCCGCGCAAGTCTTCTTCCTCAAAGGAGGATACGAAGCGTTTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS CAA 72 bp | CGAAAACGCTTCGTATCCTCCTTTGAGGAAGAAGACTaGCGCGGCGCGCGCCTCGCGGCAGAGCGCGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RKRFVSSFEEED*RGARLAAERAG Trigger: GCCGGCGCGCTCTGCCGCGAGGCGCGCGCCGCGCAAGTCTTCTTCCTCAAAGGAGGATACGAAGCGTTTTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS CAA 90 bp | CTGCACAGCTCCGGGCAGGAAGCCGAAAACGCTTCGTATCCTCCTTaGAGGAAGAAGACTTGCGCGGCGCGCGCCTCGCGGCAGAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: LHSSGQEAENASYPP*RKKTCAARASRQSA Trigger: CGCGCTCTGCCGCGAGGCGCGCGCCGCGCAAGTCTTCTTCCTCAAAGGAGGATACGAAGCGTTTTCGGCTTCCTGCCCGGAGCTGTGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS CAA 72 bp | TCCGGGCAGGAAGCCGAAAACGCTTCGTATCCTCCTTaGAGGAAGAAGACTTGCGCGGCGCGCGCCTCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SGQEAENASYPP*RKKTCAARASR Trigger: CCGCGAGGCGCGCGCCGCGCAAGTCTTCTTCCTCAAAGGAGGATACGAAGCGTTTTCGGCTTCCTGCCCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS TCA 72 bp | TGTTCGTGGAGTGGACAGGGATGGAGACGGGGAAGTTaGACACGGTGGTGGTGGAGGTGCCTCGGTCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CSWSGQGWRRGS*TRWWWRCLGRA Trigger: TGCTCGACCGAGGCACCTCCACCACCACCGTGTTCAACTTCCCCGTCTCCATCCCTGTCCACTCCACGAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS GCA 72 bp | TTTCCACCGGGCCACCCTGATCGTAGAGTGGGGTACTaGAGGAACTGCACCCAGATTCCGCGCTGTCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FPPGHPDRRVGY*RNCTQIPRCQG Trigger: TCCCTGACAGCGCGGAATCTGGGTGCAGTTCCTGCAGTACCCCACTCTACGATCAGGGTGGCCCGGTGGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS TCA 72 bp | TTCTCCTCTCAAGGAGCATGGAGTCCCAATGGGATGTaGAGAGCCTCACCTCCCGTGGCCTTTCAGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FSSQGAWSPNGM*RASPPVAFQQL Trigger: CAGCTGCTGAAAGGCCACGGGAGGTGAGGCTCTTCACATCCCATTGGGACTCCATGCTCCTTGAGAGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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| CDS TCA 72 bp | CTGGTAGTGACCCTCAAAATGGTTGGGACAATTGGCTaGGACGTTGATCAAGGCAGTGATGCCCAAGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: LVVTLKMVGTIG*DVDQGSDAQGI Trigger: GATGCCTTGGGCATCACTGCCTTGATCAACGTCTCAGCCAATTGTCCCAACCATTTTGAGGGTCACTACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239223.4 |
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