RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DUS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000167264

Ensembl transcript IDs: ENST00000358896.10, ENST00000432752.5, ENST00000561965.1, ENST00000562246.2, ENST00000564781.1, ENST00000564975.5, ENST00000565263.6, ENST00000565980.1, ENST00000566306.5, ENST00000567100.5, ENST00000568099.6, ENST00000569289.5, ENST00000570709.6, ENST00000571081.6, ENST00000575677.5, ENST00000576994.5

Found 415 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGGGCCCCCAGGGTCTTGGTCAGGAGCCTCCCTCTTTCGCTTGTaGAAGGAAGGGCTCTCCTCACCCAGCCGACCCTCAGGGAGGCCC +
Preference number: 1 (lower is better)
Translates to: LGPPGSWSGASLFRL*KEGLSSPSRPSGRP
Trigger: GGGCCTCCCTGAGGGTCGGCTGGGTGAGGAGAGCCCTTCCTTGCACAAGCGAAAGAGGGAGGCTCCTGACCAAGACCCTGGGGGCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CCA 90 bp TGCAAGGAAGGGCTCTCCTCACCCAGCCGACCCTCAGGGAGGCCCTaGCTCCGCAGACAGACGATGGCTGCAGCCTGCTCCGCCAGTTTC +
Preference number: 1 (lower is better)
Translates to: CKEGLSSPSRPSGRP*LRRQTMAAACSASF
Trigger: GAAACTGGCGGAGCAGGCTGCAGCCATCGTCTGTCTGCGGAGCCAGGGCCTCCCTGAGGGTCGGCTGGGTGAGGAGAGCCCTTCCTTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CCA 90 bp CACCCAGCCGACCCTCAGGGAGGCCCTGGCTCCGCAGACAGACGATaGCTGCAGCCTGCTCCGCCAGTTTCTTGGACTTGTCCCACAAGG +
Preference number: 1 (lower is better)
Translates to: HPADPQGGPGSADRR*LQPAPPVSWTCPTR
Trigger: CCTTGTGGGACAAGTCCAAGAAACTGGCGGAGCAGGCTGCAGCCATCGTCTGTCTGCGGAGCCAGGGCCTCCCTGAGGGTCGGCTGGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR GCA 90 bp CAGCCGACCCTCAGGGAGGCCCTGGCTCCGCAGACAGACGATGGCTaGAGCCTGCTCCGCCAGTTTCTTGGACTTGTCCCACAAGGTAGA +
Preference number: 1 (lower is better)
Translates to: QPTLREALAPQTDDG*SLLRQFLGLVPQGR
Trigger: TCTACCTTGTGGGACAAGTCCAAGAAACTGGCGGAGCAGGCTGCAGCCATCGTCTGTCTGCGGAGCCAGGGCCTCCCTGAGGGTCGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CCA 90 bp AGGGCTTCTTGCACAGATCCCCAGGTTGTGCTAGCTCCTGAGCTCTaGGGCCCCCAGGGTCTTGGTCAGGAGCCTCCCTCTTTCGCTTGT +
Preference number: 1 (lower is better)
Translates to: RASCTDPQVVLAPEL*GPQGLGQEPPSFAC
Trigger: ACAAGCGAAAGAGGGAGGCTCCTGACCAAGACCCTGGGGGCCCCAGAGCTCAGGAGCTAGCACAACCTGGGGATCTGTGCAAGAAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CCA 90 bp CTTCAGCTGGCTCCCCTGTCTGCTCTGAAGTCTTGGCTGAGAGCCTaGCCTGCTGGGCATCCAGCTCCTGTGTGGTCTCCTCATAGAAGG +
Preference number: 1 (lower is better)
Translates to: LQLAPLSALKSWLRA*PAGHPAPVWSPHRR
Trigger: CCTTCTATGAGGAGACCACACAGGAGCTGGATGCCCAGCAGGCCAGGCTCTCAGCCAAGACTTCAGAGCAGACAGGGGAGCCAGCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CCA 90 bp CCAAGGCCAAAGGCCTCACAAATTTCCCGGGAAGACTGGGCAGCATaGAGCAACCTTCCCTGGGGCGACTCCAGCTGTTCTCGTAGCATC +
Preference number: 1 (lower is better)
Translates to: PRPKASQISREDWAA*SNLPWGDSSCSRSI
Trigger: GATGCTACGAGAACAGCTGGAGTCGCCCCAGGGAAGGTTGCTCCATGCTGCCCAGTCTTCCCGGGAAATTTGTGAGGCCTTTGGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR GCA 90 bp TTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATaGTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGGAGGGG +
Preference number: 1 (lower is better)
Translates to: FCQARPANCSTASGS*CGIHSHLSTRPMEG
Trigger: CCCCTCCATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
3UTR GCA 90 bp GCCATCTTAATGACACCAGAGGTATCTTCAGCTGGCTCCCCTGTCTaGTCTGAAGTCTTGGCTGAGAGCCTGGCCTGCTGGGCATCCAGC +
Preference number: 1 (lower is better)
Translates to: AILMTPEVSSAGSPV*SEVLAESLACWASS
Trigger: GCTGGATGCCCAGCAGGCCAGGCTCTCAGCCAAGACTTCAGAGCAGACAGGGGAGCCAGCTGAAGATACCTCTGGTGTCATTAAGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR GCA 90 bp GAGGTCGCTCCTCCCGCTTCCTCCCATGAACTGCGATGGCAGCAATaGCAGTCCTCTCTATCCGCTTCACAAGGCTCAGGGTATCTTCTA +
Preference number: 1 (lower is better)
Translates to: EVAPPASSHELRWQQ*QSSLSASQGSGYLL
Trigger: TAGAAGATACCCTGAGCCTTGTGAAGCGGATAGAGAGGACTGGCATTGCTGCCATCGCAGTTCATGGGAGGAAGCGGGAGGAGCGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CCA 90 bp GGTTCCACATGGCTGCTCGGGCCACCATCACGGAAGAGGCTGCCGTaGCTTGTCGAAAGTCCTCTATGTCCGAATACTGTTGGATGTGGT +
Preference number: 1 (lower is better)
Translates to: GSTWLLGPPSRKRLP*LVESPLCPNTVGCG
Trigger: ACCACATCCAACAGTATTCGGACATAGAGGACTTTCGACAAGCCACGGCAGCCTCTTCCGTGATGGTGGCCCGAGCAGCCATGTGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CCA 90 bp TCACAAATTTCCCGGGAAGACTGGGCAGCATGGAGCAACCTTCCCTaGGGCGACTCCAGCTGTTCTCGTAGCATCTGGCACAAGCAGTAC +
Preference number: 1 (lower is better)
Translates to: SQISREDWAAWSNLP*GDSSCSRSIWHKQY
Trigger: GTACTGCTTGTGCCAGATGCTACGAGAACAGCTGGAGTCGCCCCAGGGAAGGTTGCTCCATGCTGCCCAGTCTTCCCGGGAAATTTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR GCA 90 bp GGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTaGCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGC +
Preference number: 1 (lower is better)
Translates to: GPCSRLMAPARTSNF*QARPANCSTASGSC
Trigger: GCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
3UTR GCA 90 bp AGATGGGTTCCACATGGCTGCTCGGGCCACCATCACGGAAGAGGCTaGCGTGGCTTGTCGAAAGTCCTCTATGTCCGAATACTGTTGGAT +
Preference number: 1 (lower is better)
Translates to: RWVPHGCSGHHHGRG*RGLSKVLYVRILLD
Trigger: ATCCAACAGTATTCGGACATAGAGGACTTTCGACAAGCCACGGCAGCCTCTTCCGTGATGGTGGCCCGAGCAGCCATGTGGAACCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CCA 90 bp AAGTCTTGGCTGAGAGCCTGGCCTGCTGGGCATCCAGCTCCTGTGTaGTCTCCTCATAGAAGGCACCAAGGCCAAAGGCCTCACAAATTT +
Preference number: 1 (lower is better)
Translates to: KSWLRAWPAGHPAPV*SPHRRHQGQRPHKF
Trigger: AAATTTGTGAGGCCTTTGGCCTTGGTGCCTTCTATGAGGAGACCACACAGGAGCTGGATGCCCAGCAGGCCAGGCTCTCAGCCAAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR TCA 90 bp TGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTaGAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGA +
Preference number: 1 (lower is better)
Translates to: CLYCTVPMSGWGVTT*KAPVFKENLTLSLR
Trigger: TCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
3UTR-3UTR GCA 90 bp CACCACTCTAGTAGGCACATCTTAGGGGTGATCTGGGCTGGGTATGCTCTCCGGGCGGCCCCTGGTCCATaGTCTAGGCTGATGGCCCCT +
Preference number: 2 (lower is better)
Translates to: HHSSRHILGVIWAGYALRAAPGP*SRLMAP
Trigger: AGGGGCCATCAGCCTAGAGCATGGACCAGGGGCCGC...CCGGAGAGCATACCCAGCCCAGATCACCCCTAAGATGTGCCTACTAGAGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CAA 90 bp ACACCAGAGGTATCTTCAGCTGGCTCCCCTGTCTGCTCTGAAGTCTaGGCTGAGAGCCTGGCCTGCTGGGCATCCAGCTCCTGTGTGGTC +
Preference number: 2 (lower is better)
Translates to: TPEVSSAGSPVCSEV*AESLACWASSSCVV
Trigger: GACCACACAGGAGCTGGATGCCCAGCAGGCCAGGCTCTCAGCCAAGACTTCAGAGCAGACAGGGGAGCCAGCTGAAGATACCTCTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR-3UTR TCA 90 bp AAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCCGAAGATGCCCAAGGCTaGAGCAGCCAGCCGTGGGTG +
Preference number: 2 (lower is better)
Translates to: KENLTLSLRSTKGARIHPEDAQG*SSQPWV
Trigger: CACCCACGGCTGGCTGCTTCAGCCTTGGGCATCTTC...GGGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
3UTR-3UTR CCA 90 bp GTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTGCCAGGATCCACCCCTaGGCGGCCCCTGGTCCATGC +
Preference number: 2 (lower is better)
Translates to: VGGVFIAQYQCQVGELPPARIHP*AAPGPC
Trigger: GCATGGACCAGGGGCCGCCCAGGGGTGGATCCTGGC...AGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
3UTR-3UTR GCA 90 bp CCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGGCGGCCCCTGGTCCATaGTCTAGGCTGATGGCCCCT +
Preference number: 2 (lower is better)
Translates to: PVFKENLTLSLRSTKGARAAPGP*SRLMAP
Trigger: AGGGGCCATCAGCCTAGAGCATGGACCAGGGGCCGC...CCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
3UTR-3UTR GCA 90 bp AAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCCTGGGTTCCACATGGCTaGTCGGGCCACCATCACGGA +
Preference number: 2 (lower is better)
Translates to: KENLTLSLRSTKGARIHPWVPHG*SGHHHG
Trigger: TCCGTGATGGTGGCCCGAGCAGCCATGTGGAACCCA...GGGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CAA 90 bp CCACATGGCTGCTCGGGCCACCATCACGGAAGAGGCTGCCGTGGCTaGTCGAAAGTCCTCTATGTCCGAATACTGTTGGATGTGGTCATG +
Preference number: 2 (lower is better)
Translates to: PHGCSGHHHGRGCRG*SKVLYVRILLDVVM
Trigger: CATGACCACATCCAACAGTATTCGGACATAGAGGACTTTCGACAAGCCACGGCAGCCTCTTCCGTGATGGTGGCCCGAGCAGCCATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR-3UTR GCA 90 bp CACCACTCTAGTAGGCACATCTTAGGGGTGATCTGGGCTGGGTATGCTCTCCGGCTGCGATGGCAGCAATaGCAGTCCTCTCTATCCGCT +
Preference number: 2 (lower is better)
Translates to: HHSSRHILGVIWAGYALRLRWQQ*QSSLSA
Trigger: AGCGGATAGAGAGGACTGGCATTGCTGCCATCGCAG...CCGGAGAGCATACCCAGCCCAGATCACCCCTAAGATGTGCCTACTAGAGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR-3UTR TCA 90 bp CCTGGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGTTGGACAGCCCATGTTaGCATCAATACCAGCCACAT +
Preference number: 2 (lower is better)
Translates to: PGPCSRLMAPARTSNFCQLDSPC*HQYQPH
Trigger: ATGTGGCTGGTATTGATGTCAACATGGGCTGTCCAA...CTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR-3UTR GCA 90 bp CAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTACGGCATCTGGTTCATaGTGTGGCATCCACAGCCAC +
Preference number: 2 (lower is better)
Translates to: QPWVRVGGVFIAQYQCQVTASGS*CGIHSH
Trigger: GTGGCTGTGGATGCCACAGCATGAACCAGATGCCGT...AACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
3UTR-3UTR CCA 90 bp GCCCCTGGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCTCCCATTCCTCCCTTaGTGGAATATTGTTTTGGAC +
Preference number: 2 (lower is better)
Translates to: APGPCSRLMAPARTSNFCLPFLP*WNIVLD
Trigger: GTCCAAAACAATATTCCACCAAGGGAGGAATGGGAG...GCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACCAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR-3UTR CCA 90 bp TCTAGTAGGCACATCTTAGGGGTGATCTGGGCTGGGTATGCTCTCCGGTCAAACCGGAAGAGGCTGCCGTaGCTTGTCGAAAGTCCTCTA +
Preference number: 2 (lower is better)
Translates to: SSRHILGVIWAGYALRSNRKRLP*LVESPL
Trigger: TAGAGGACTTTCGACAAGCCACGGCAGCCTCTTCCG...GTTTGACCGGAGAGCATACCCAGCCCAGATCACCCCTAAGATGTGCCTACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR-3UTR CCA 90 bp CAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCCTGTTCAACGGCATCTaGTTCATGCTGTGGCATCCA +
Preference number: 2 (lower is better)
Translates to: QRELDPVTQIHQRGQDPPLFNGI*FMLWHP
Trigger: TGGATGCCACAGCATGAACCAGATGCCGTTGAACAG...GGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
3UTR-3UTR CCA 90 bp AAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCCCTGTTCAACGGCATCTaGTTCATGCTGTGGCATCCA +
Preference number: 2 (lower is better)
Translates to: KENLTLSLRSTKGARIHPLFNGI*FMLWHP
Trigger: TGGATGCCACAGCATGAACCAGATGCCGTTGAACAG...GGGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
3UTR-3UTR TCA 90 bp CACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACGTCCATGCTCTAGGCTaGTGGCCCCTGCCAGGACAT +
Preference number: 2 (lower is better)
Translates to: HLKSSCFQRELDPVTQIHVHALG*WPLPGH
Trigger: ATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGAC...GTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
3UTR-3UTR GCA 90 bp GTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTACGGCATCTGGTTCATaGTGTGGCATCCACAGCCAC +
Preference number: 2 (lower is better)
Translates to: VGGVFIAQYQCQVGELPPTASGS*CGIHSH
Trigger: GTGGCTGTGGATGCCACAGCATGAACCAGATGCCGT...AGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
3UTR CAA 90 bp AGAGGCTGCCGTGGCTTGTCGAAAGTCCTCTATGTCCGAATACTGTaGGATGTGGTCATGAGATCCTCCGTTGGCTATGACAGGAATGGA +
Preference number: 2 (lower is better)
Translates to: RGCRGLSKVLYVRIL*DVVMRSSVGYDRNG
Trigger: TCCATTCCTGTCATAGCCAACGGAGGATCTCATGACCACATCCAACAGTATTCGGACATAGAGGACTTTCGACAAGCCACGGCAGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR-3UTR GCA 90 bp GTCGAAAGTCCTCTATGTCCGAATACTGTTGGATGTGGTCATGAGATCCTCCGTACGGCATCTGGTTCATaGTGTGGCATCCACAGCCAC +
Preference number: 2 (lower is better)
Translates to: VESPLCPNTVGCGHEILRTASGS*CGIHSH
Trigger: GTGGCTGTGGATGCCACAGCATGAACCAGATGCCGT...ACGGAGGATCTCATGACCACATCCAACAGTATTCGGACATAGAGGACTTTCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR-3UTR GCA 90 bp AAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCCAGGGGGTGTCTTTATTaGACAGTACCAATGTCAGGT +
Preference number: 2 (lower is better)
Translates to: KENLTLSLRSTKGARIHPRGCLY*TVPMSG
Trigger: ACCTGACATTGGTACTGTGCAATAAAGACACCCCCT...GGGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
3UTR-3UTR CCA 90 bp CACCACTCTAGTAGGCACATCTTAGGGGTGATCTGGGCTGGGTATGCTCTCCGGAGCAGTACTTGGTGTTaGTGTAGTGGTTGTCATACT +
Preference number: 2 (lower is better)
Translates to: HHSSRHILGVIWAGYALRSSTWC*CSGCHT
Trigger: AGTATGACAACCACTACACCAACACCAAGTACTGCT...CCGGAGAGCATACCCAGCCCAGATCACCCCTAAGATGTGCCTACTAGAGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR-3UTR TCA 90 bp AGCAGCCAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTTTTTCAAAGAGAACTTaGCCCTGTCACTCAGATCCA +
Preference number: 2 (lower is better)
Translates to: SSQPWVRVGGVFIAQYQCFSKRT*PCHSDP
Trigger: TGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAA...ACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTGGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
3UTR-3UTR GCA 90 bp GGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTAGGACATCTAACTTCTaGCAGGCAAGACCAGCAAAC +
Preference number: 2 (lower is better)
Translates to: GEGRGCLYCTVPMSGWGVRTSNF*QARPAN
Trigger: GTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCT...AACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
3UTR-3UTR TCA 90 bp TACCACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCAATCTTGTCAGGGTCTaGCAGCAGGGCAGCTCCCAT +
Preference number: 2 (lower is better)
Translates to: YHLKSSCFQRELDPVTQINLVRV*QQGSSH
Trigger: ATGGGAGCTGCCCTGCTGTCAGACCCTGACAAGATT...GATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR-3UTR CCA 90 bp CCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGCCATTCCTCCCTTGGTaGAATATTGTTTTGGACAGC +
Preference number: 2 (lower is better)
Translates to: PVFKENLTLSLRSTKGARPFLPW*NIVLDS
Trigger: GCTGTCCAAAACAATATTCCACCAAGGGAGGAATGG...CCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR-3UTR TCA 90 bp CAAGGTAGACTGATACTTTTGTTCAGCAACGGTGACAATAGAGGAGAACAGGCGTGTTGGATGTGGTCATaGGATCCTCCGTTGGCTATG +
Preference number: 2 (lower is better)
Translates to: QGRLILLFSNGDNRGEQACWMWS*DPPLAM
Trigger: CATAGCCAACGGAGGATCTCATGACCACATCCAACA...CGCCTGTTCTCCTCTATTGTCACCGTTGCTGAACAAAAGTATCAGTCTACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR-3UTR GCA 90 bp CACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACAGGACATCTAACTTCTaGCAGGCAAGACCAGCAAAC +
Preference number: 2 (lower is better)
Translates to: HLKSSCFQRELDPVTQIHRTSNF*QARPAN
Trigger: GTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCT...GTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
3UTR-3UTR CCA 90 bp ACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCAGGTGGAATATTGTTTTaGACAGCCCATGTTGACATC +
Preference number: 2 (lower is better)
Translates to: TSNFCQARPANCSTASGSGGILF*TAHVDI
Trigger: GATGTCAACATGGGCTGTCCAAAACAATATTCCACC...TGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR-3UTR TCA 90 bp GGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTGAAAAGTTTTCAAAGAGAACTTaGCCCTGTCACTCAGATCCA +
Preference number: 2 (lower is better)
Translates to: GVFIAQYQCQVGELPPEKFSKRT*PCHSDP
Trigger: TGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAA...CTTTTCAGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
3UTR CCA 72 bp GGGCTCTCCTCACCCAGCCGACCCTCAGGGAGGCCCTaGCTCCGCAGACAGACGATGGCTGCAGCCTGCTCC +
Preference number: 3 (lower is better)
Translates to: GLSSPSRPSGRP*LRRQTMAAACS
Trigger: GGAGCAGGCTGCAGCCATCGTCTGTCTGCGGAGCCAGGGCCTCCCTGAGGGTCGGCTGGGTGAGGAGAGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CCA 72 bp TCCCGGGAAGACTGGGCAGCATGGAGCAACCTTCCCTaGGGCGACTCCAGCTGTTCTCGTAGCATCTGGCAC +
Preference number: 3 (lower is better)
Translates to: SREDWAAWSNLP*GDSSCSRSIWH
Trigger: GTGCCAGATGCTACGAGAACAGCTGGAGTCGCCCCAGGGAAGGTTGCTCCATGCTGCCCAGTCTTCCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CCA 72 bp GCTCCCCTGTCTGCTCTGAAGTCTTGGCTGAGAGCCTaGCCTGCTGGGCATCCAGCTCCTGTGTGGTCTCCT +
Preference number: 3 (lower is better)
Translates to: APLSALKSWLRA*PAGHPAPVWSP
Trigger: AGGAGACCACACAGGAGCTGGATGCCCAGCAGGCCAGGCTCTCAGCCAAGACTTCAGAGCAGACAGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR GCA 72 bp ACCCTCCTTGAGGAAGATAGATGGGTTCCACATGGCTaGTCGGGCCACCATCACGGAAGAGGCTGCCGTGGC +
Preference number: 3 (lower is better)
Translates to: TLLEEDRWVPHG*SGHHHGRGCRG
Trigger: GCCACGGCAGCCTCTTCCGTGATGGTGGCCCGAGCAGCCATGTGGAACCCATCTATCTTCCTCAAGGAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR GCA 72 bp AGGCCCTGGCTCCGCAGACAGACGATGGCTGCAGCCTaGTCCGCCAGTTTCTTGGACTTGTCCCACAAGGTA +
Preference number: 3 (lower is better)
Translates to: RPWLRRQTMAAA*SASFLDLSHKV
Trigger: TACCTTGTGGGACAAGTCCAAGAAACTGGCGGAGCAGGCTGCAGCCATCGTCTGTCTGCGGAGCCAGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CCA 72 bp CCAAGGCCAAAGGCCTCACAAATTTCCCGGGAAGACTaGGCAGCATGGAGCAACCTTCCCTGGGGCGACTCC +
Preference number: 3 (lower is better)
Translates to: PRPKASQISRED*AAWSNLPWGDS
Trigger: GGAGTCGCCCCAGGGAAGGTTGCTCCATGCTGCCCAGTCTTCCCGGGAAATTTGTGAGGCCTTTGGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CCA 72 bp CTGAGAGCCTGGCCTGCTGGGCATCCAGCTCCTGTGTaGTCTCCTCATAGAAGGCACCAAGGCCAAAGGCCT +
Preference number: 3 (lower is better)
Translates to: LRAWPAGHPAPV*SPHRRHQGQRP
Trigger: AGGCCTTTGGCCTTGGTGCCTTCTATGAGGAGACCACACAGGAGCTGGATGCCCAGCAGGCCAGGCTCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR GCA 72 bp CCTCCCGCTTCCTCCCATGAACTGCGATGGCAGCAATaGCAGTCCTCTCTATCCGCTTCACAAGGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: PPASSHELRWQQ*QSSLSASQGSG
Trigger: CCCTGAGCCTTGTGAAGCGGATAGAGAGGACTGGCATTGCTGCCATCGCAGTTCATGGGAGGAAGCGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR GCA 72 bp CCACATGGCTGCTCGGGCCACCATCACGGAAGAGGCTaGCGTGGCTTGTCGAAAGTCCTCTATGTCCGAATA +
Preference number: 3 (lower is better)
Translates to: PHGCSGHHHGRG*RGLSKVLYVRI
Trigger: TATTCGGACATAGAGGACTTTCGACAAGCCACGGCAGCCTCTTCCGTGATGGTGGCCCGAGCAGCCATGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR GCA 72 bp ATGACACCAGAGGTATCTTCAGCTGGCTCCCCTGTCTaGTCTGAAGTCTTGGCTGAGAGCCTGGCCTGCTGG +
Preference number: 3 (lower is better)
Translates to: MTPEVSSAGSPV*SEVLAESLACW
Trigger: CCAGCAGGCCAGGCTCTCAGCCAAGACTTCAGAGCAGACAGGGGAGCCAGCTGAAGATACCTCTGGTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CCA 72 bp GAGGTCGCTCCTCCCGCTTCCTCCCATGAACTGCGATaGCAGCAATGCCAGTCCTCTCTATCCGCTTCACAA +
Preference number: 3 (lower is better)
Translates to: EVAPPASSHELR*QQCQSSLSASQ
Trigger: TTGTGAAGCGGATAGAGAGGACTGGCATTGCTGCCATCGCAGTTCATGGGAGGAAGCGGGAGGAGCGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR-3UTR CAA 90 bp AAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCCGGCCGCAGACCCTCCTaGAGGAAGATAGATGGGTTC +
Preference number: 3 (lower is better)
Translates to: KENLTLSLRSTKGARIHPGRRPS*RKIDGF
Trigger: GAACCCATCTATCTTCCTCAAGGAGGGTCTGCGGCC...GGGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR GCA 72 bp GCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATaGTGTGGCATCCACAGCCACCTTAGCACCAGGCCC +
Preference number: 3 (lower is better)
Translates to: ARPANCSTASGS*CGIHSHLSTRP
Trigger: GGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
3UTR CCA 72 bp TGGCTGCTCGGGCCACCATCACGGAAGAGGCTGCCGTaGCTTGTCGAAAGTCCTCTATGTCCGAATACTGTT +
Preference number: 3 (lower is better)
Translates to: WLLGPPSRKRLP*LVESPLCPNTV
Trigger: AACAGTATTCGGACATAGAGGACTTTCGACAAGCCACGGCAGCCTCTTCCGTGATGGTGGCCCGAGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CCA 72 bp CGGCACCACTCTAGTAGGCACATCTTAGGGGTGATCTaGGCTGGGTATGCTCTCCGGTCAAACTTGACAGCC +
Preference number: 3 (lower is better)
Translates to: RHHSSRHILGVI*AGYALRSNLTA
Trigger: GGCTGTCAAGTTTGACCGGAGAGCATACCCAGCCCAGATCACCCCTAAGATGTGCCTACTAGAGTGGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR TCA 72 bp AAGAGTGCTGAGGATCTTCTCAATCTTGTCAGGGTCTaGCAGCAGGGCAGCTCCCATTCCTCCCTTGGTGGA +
Preference number: 3 (lower is better)
Translates to: KSAEDLLNLVRV*QQGSSHSSLGG
Trigger: TCCACCAAGGGAGGAATGGGAGCTGCCCTGCTGTCAGACCCTGACAAGATTGAGAAGATCCTCAGCACTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR GCA 72 bp TCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTaGCAGGCAAGACCAGCAAACTGTTCAACGGCATCT +
Preference number: 3 (lower is better)
Translates to: SRLMAPARTSNF*QARPANCSTAS
Trigger: AGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
3UTR CCA 72 bp CCAGCTGTTCTCGTAGCATCTGGCACAAGCAGTACTTaGTGTTGGTGTAGTGGTTGTCATACTGCACCGCGT +
Preference number: 3 (lower is better)
Translates to: PAVLVASGTSST*CWCSGCHTAPR
Trigger: ACGCGGTGCAGTATGACAACCACTACACCAACACCAAGTACTGCTTGTGCCAGATGCTACGAGAACAGCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR-3UTR CAA 90 bp TGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAAGCTCCCATTCCTCCCTaGGTGGAATATTGTTTTGGA +
Preference number: 3 (lower is better)
Translates to: WPLPGHLTSARQDQQTVQAPIPP*VEYCFG
Trigger: TCCAAAACAATATTCCACCAAGGGAGGAATGGGAGC...TTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR CCA 72 bp GGCAGCTCCCATTCCTCCCTTGGTGGAATATTGTTTTaGACAGCCCATGTTGACATCAATACCAGCCACATC +
Preference number: 3 (lower is better)
Translates to: GSSHSSLGGILF*TAHVDINTSHI
Trigger: GATGTGGCTGGTATTGATGTCAACATGGGCTGTCCAAAACAATATTCCACCAAGGGAGGAATGGGAGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
3UTR-3UTR CAA 90 bp GGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTGTTTTCAAAGAGAACTaGACCCTGTCACTCAGATCC +
Preference number: 3 (lower is better)
Translates to: GEGRGCLYCTVPMSGWGVVFKEN*TLSLRS
Trigger: GGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAAC...AACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
3UTR-3UTR CAA 90 bp GTTCTCGTAGCATCTGGCACAAGCAGTACTTGGTGTTGGTGTAGTGGTTGTCATTTTGGACAGCCCATGTaGACATCAATACCAGCCACA +
Preference number: 3 (lower is better)
Translates to: VLVASGTSSTWCWCSGCHFGQPM*TSIPAT
Trigger: TGTGGCTGGTATTGATGTCAACATGGGCTGTCCAAA...ATGACAACCACTACACCAACACCAAGTACTGCTTGTGCCAGATGCTACGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CCA 90 bp TCTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGGAGGGGGCCAGGATCCACCCCTaGGCGGCCCCTGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: SGSCCGIHSHLSTRPMEGARIHP*AAPGPC
Trigger: GCATGGACCAGGGGCCGCCCAGGGGTGGATCCTGGC...CCCCTCCATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
3UTR CAA 72 bp CCCCCAGGGTCTTGGTCAGGAGCCTCCCTCTTTCGCTaGTGCAAGGAAGGGCTCTCCTCACCCAGCCGACCC +
Preference number: 4 (lower is better)
Translates to: PPGSWSGASLFR*CKEGLSSPSRP
Trigger: GGGTCGGCTGGGTGAGGAGAGCCCTTCCTTGCACAAGCGAAAGAGGGAGGCTCCTGACCAAGACCCTGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CCA 90 bp AGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACGCCAGGATCCACCCCTaGGCGGCCCCTGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: RLMAPARTSNFCQARPANARIHP*AAPGPC
Trigger: GCATGGACCAGGGGCCGCCCAGGGGTGGATCCTGGC...GTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp TCTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGGAGGGGGAGAGCCTGGCCTGCTaGGCATCCAGCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SGSCCGIHSHLSTRPMEGESLAC*ASSSCV
Trigger: CACACAGGAGCTGGATGCCCAGCAGGCCAGGCTCTC...CCCCTCCATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCACCCTCAGGGAGGCCCTaGCTCCGCAGACAGACGATG +
Preference number: 4 (lower is better)
Translates to: GPCSRLMAPARTSNFCQAPSGRP*LRRQTM
Trigger: CATCGTCTGTCTGCGGAGCCAGGGCCTCCCTGAGGG...TGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GCCCCTGGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCGGGCCCCCAGGGTCTTaGTCAGGAGCCTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: APGPCSRLMAPARTSNFCGPPGS*SGASLF
Trigger: AAAGAGGGAGGCTCCTGACCAAGACCCTGGGGGCCC...GCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACCAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGGAGGGGTTGGGTTCCACATGGCTaGTCGGGCCACCATCACGGA +
Preference number: 4 (lower is better)
Translates to: LVHAVASTATLAPGPWRGWVPHG*SGHHHG
Trigger: TCCGTGATGGTGGCCCGAGCAGCCATGTGGAACCCA...ACCCCTCCATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAGGGCCCCCAGGGTCTTaGTCAGGAGCCTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GPCSRLMAPARTSNFCQAGPPGS*SGASLF
Trigger: AAAGAGGGAGGCTCCTGACCAAGACCCTGGGGGCCC...TGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CCTGGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGCTAGCTCCTGAGCTCTaGGGCCCCCAGGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PGPCSRLMAPARTSNFCQLAPEL*GPQGLG
Trigger: ACCAAGACCCTGGGGGCCCCAGAGCTCAGGAGCTAG...CTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp TGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCGCCAGGATCCACCCCTaGGCGGCCCCTGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: CQARPANCSTASGSCCGIARIHP*AAPGPC
Trigger: GCATGGACCAGGGGCCGCCCAGGGGTGGATCCTGGC...GATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
3UTR CAA 72 bp GTATCTTCAGCTGGCTCCCCTGTCTGCTCTGAAGTCTaGGCTGAGAGCCTGGCCTGCTGGGCATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VSSAGSPVCSEV*AESLACWASSS
Trigger: GGAGCTGGATGCCCAGCAGGCCAGGCTCTCAGCCAAGACTTCAGAGCAGACAGGGGAGCCAGCTGAAGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR TCA 90 bp GGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAGGCTCGCTCTGCGTCTaGAGTCCCCATCTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: GPCSRLMAPARTSNFCQAGSLCV*SPHLED
Trigger: GTCTTCCAGATGGGGACTTCAGACGCAGAGCGAGCC...TGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp TCTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGGAGGGGTCCCGCTTCCTCCCATaGACTGCGATGGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: SGSCCGIHSHLSTRPMEGSRFLP*TAMAAM
Trigger: CATTGCTGCCATCGCAGTTCATGGGAGGAAGCGGGA...CCCCTCCATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGGAGGGGTGCTTCTTCCTCACGGTaGTCCAGCTCCACACACCGT +
Preference number: 4 (lower is better)
Translates to: LVHAVASTATLAPGPWRGASSSR*SSSTHR
Trigger: ACGGTGTGTGGAGCTGGAGCACCGTGAGGAAGAAGC...ACCCCTCCATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358896.10
ENST00000565263.6
CDS-3UTR GCA 90 bp TCTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGGAGGGGACGATGGCTGCAGCCTaGTCCGCCAGTTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SGSCCGIHSHLSTRPMEGTMAAA*SASFLD
Trigger: GTCCAAGAAACTGGCGGAGCAGGCTGCAGCCATCGT...CCCCTCCATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GCCCCTGGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCTGGAGCAACCTTCCCTaGGGCGACTCCAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: APGPCSRLMAPARTSNFCWSNLP*GDSSCS
Trigger: AGAACAGCTGGAGTCGCCCCAGGGAAGGTTGCTCCA...GCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACCAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCATCTTGGCTGAGAGCCTaGCCTGCTGGGCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPCSRLMAPARTSNFCQASWLRA*PAGHPA
Trigger: AGCTGGATGCCCAGCAGGCCAGGCTCTCAGCCAAGA...TGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp AGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACGTCCATGCTCTAGGCTaGTGGCCCCTGCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: RLMAPARTSNFCQARPANVHALG*WPLPGH
Trigger: ATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGAC...GTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp AGCAGCCAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTGCTGAGAGCCTGGCCTaGTGGGCATCCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SSQPWVRVGGVFIAQYQCAESLA*WASSSC
Trigger: ACAGGAGCTGGATGCCCAGCAGGCCAGGCTCTCAGC...ACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTGGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR GCA 90 bp CCTGGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCTGGCTCCCCTGTCTaGTCTGAAGTCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PGPCSRLMAPARTSNFCQAGSPV*SEVLAE
Trigger: CTCAGCCAAGACTTCAGAGCAGACAGGGGAGCCAGC...CTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp TGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCGCGGCCCCTGGTCCATaGTCTAGGCTGATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: CQARPANCSTASGSCCGIAAPGP*SRLMAP
Trigger: AGGGGCCATCAGCCTAGAGCATGGACCAGGGGCCGC...GATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp ATGCCAGTCCTCTCTATCCGCTTCACAAGGCTCAGGGTATCTTCTAGCGATGGCGCGGCCCCTGGTCCATaGTCTAGGCTGATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: MPVLSIRFTRLRVSSSDGAAPGP*SRLMAP
Trigger: AGGGGCCATCAGCCTAGAGCATGGACCAGGGGCCGC...GCCATCGCTAGAAGATACCCTGAGCCTTGTGAAGCGGATAGAGAGGACTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR GCA 90 bp ACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTGCGGCCCCTGGTCCATaGTCTAGGCTGATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TSKLFNGIWFMLWHPQPPAAPGP*SRLMAP
Trigger: AGGGGCCATCAGCCTAGAGCATGGACCAGGGGCCGC...AGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGGAGGGGTCGGAAGAGGCTGCCGTaGCTTGTCGAAAGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LVHAVASTATLAPGPWRGRKRLP*LVESPL
Trigger: TAGAGGACTTTCGACAAGCCACGGCAGCCTCTTCCG...ACCCCTCCATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GCCCCTGGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCAGGGGTGATCTGGGCTaGGTATGCTCTCCGGTCAAA +
Preference number: 4 (lower is better)
Translates to: APGPCSRLMAPARTSNFCRGDLG*VCSPVK
Trigger: TTTGACCGGAGAGCATACCCAGCCCAGATCACCCCT...GCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACCAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCGGGCCCCCAGGGTCTTaGTCAGGAGCCTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: QRELDPVTQIHQRGQDPPGPPGS*SGASLF
Trigger: AAAGAGGGAGGCTCCTGACCAAGACCCTGGGGGCCC...GGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp AAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCCCTAGCTCCTGAGCTCTaGGGCCCCCAGGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: KENLTLSLRSTKGARIHPLAPEL*GPQGLG
Trigger: ACCAAGACCCTGGGGGCCCCAGAGCTCAGGAGCTAG...GGGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CCGGTCAAACTTGACAGCCATCTTAATGACACCAGAGGTATCTTCAGCTGGCTCGCCAGGATCCACCCCTaGGCGGCCCCTGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: PVKLDSHLNDTRGIFSWLARIHP*AAPGPC
Trigger: GCATGGACCAGGGGCCGCCCAGGGGTGGATCCTGGC...GAGCCAGCTGAAGATACCTCTGGTGTCATTAAGATGGCTGTCAAGTTTGACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CCA 90 bp CTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGGAGGGGTCCCATTCCTCCCATCTaGAAGACCACCCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LVHAVASTATLAPGPWRGPIPPI*KTTLFC
Trigger: GCAGAACAGGGTGGTCTTCCAGATGGGAGGAATGGG...ACCCCTCCATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432752.5
CDS-3UTR TCA 90 bp AAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCCGTCCATGCTCTAGGCTaGTGGCCCCTGCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: KENLTLSLRSTKGARIHPVHALG*WPLPGH
Trigger: ATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGAC...GGGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp TGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCGAAGATGCCCAAGGCTaGAGCAGCCAGCCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: CQARPANCSTASGSCCGIEDAQG*SSQPWV
Trigger: CACCCACGGCTGGCTGCTTCAGCCTTGGGCATCTTC...GATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR GCA 90 bp CCTGGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAGGATGCGAATCTTaGAGGTCACAGGTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: PGPCSRLMAPARTSNFCQAGCES*RSQVCV
Trigger: CACGCAGACCTGTGACCTGCAAGATTCGCATCCTGC...CTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGGAGGGGTCTTCCTCCCATGAACTaGGATGGCAGCAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: LVHAVASTATLAPGPWRGLPPMN*DGSNAS
Trigger: ACTGGCATTGCTGCCATCGCAGTTCATGGGAGGAAG...ACCCCTCCATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGCTGAGAGCCTGGCCTaGTGGGCATCCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QPWVRVGGVFIAQYQCQVAESLA*WASSSC
Trigger: ACAGGAGCTGGATGCCCAGCAGGCCAGGCTCTCAGC...AACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR GCA 90 bp CCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCAGCTGAGAGCCTGGCCTaGTGGGCATCCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PGKTSKLFNGIWFMLWHPAESLA*WASSSC
Trigger: ACAGGAGCTGGATGCCCAGCAGGCCAGGCTCTCAGC...TGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGGCTGAGAGCCTGGCCTaGTGGGCATCCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LLPGKTSKLFNGIWFMLWAESLA*WASSSC
Trigger: ACAGGAGCTGGATGCCCAGCAGGCCAGGCTCTCAGC...CCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp GCCCCTGGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCTTCATACACAGGCTGTaGCAACTTCTCCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: APGPCSRLMAPARTSNFCFIHRL*QLLPPA
Trigger: TGCCGGAGGGAGAAGTTGGCACAGCCTGTGTATGAA...GCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp GCCCCTGGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCTCCCTCTTTCGCTTGTaGAAGGAAGGGCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: APGPCSRLMAPARTSNFCSLFRL*KEGLSS
Trigger: TGAGGAGAGCCCTTCCTTGCACAAGCGAAAGAGGGA...GCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GCCCCTGGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCATTTCCCGGGAAGACTaGGCAGCATGGAGCAACCTT +
Preference number: 4 (lower is better)
Translates to: APGPCSRLMAPARTSNFCISRED*AAWSNL
Trigger: AAGGTTGCTCCATGCTGCCCAGTCTTCCCGGGAAAT...GCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCTCTTGGCTGAGAGCCTaGCCTGCTGGGCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: ARQDQQTVQRHLVHAVASSWLRA*PAGHPA
Trigger: AGCTGGATGCCCAGCAGGCCAGGCTCTCAGCCAAGA...GGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCATCTGCTCTGAAGTCTTaGCTGAGAGCCTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GPCSRLMAPARTSNFCQASALKS*LRAWPA
Trigger: AGCAGGCCAGGCTCTCAGCCAAGACTTCAGAGCAGA...TGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGGGGTGATCTGGGCTaGGTATGCTCTCCGGTCAAA +
Preference number: 4 (lower is better)
Translates to: GPCSRLMAPARTSNFCQARGDLG*VCSPVK
Trigger: TTTGACCGGAGAGCATACCCAGCCCAGATCACCCCT...TGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp TGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCTCCGCAGACAGACGATaGCTGCAGCCTGCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: CQARPANCSTASGSCCGISADRR*LQPAPP
Trigger: TGGCGGAGCAGGCTGCAGCCATCGTCTGTCTGCGGA...GATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCTCCGCAGACAGACGATaGCTGCAGCCTGCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: ARPANCSTASGSCCGIHSSADRR*LQPAPP
Trigger: TGGCGGAGCAGGCTGCAGCCATCGTCTGTCTGCGGA...GCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GTGCTGAGGATCTTCTCAATCTTGTCAGGGTCTGACAGCAGGGCAGCTCCCATTTCCGCAGACAGACGATaGCTGCAGCCTGCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: VLRIFSILSGSDSRAAPISADRR*LQPAPP
Trigger: TGGCGGAGCAGGCTGCAGCCATCGTCTGTCTGCGGA...AATGGGAGCTGCCCTGCTGTCAGACCCTGACAAGATTGAGAAGATCCTCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CCA 90 bp CCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGCCCTCAGGGAGGCCCTaGCTCCGCAGACAGACGATG +
Preference number: 4 (lower is better)
Translates to: PGHLTSARQDQQTVQRHLPSGRP*LRRQTM
Trigger: CATCGTCTGTCTGCGGAGCCAGGGCCTCCCTGAGGG...CAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GTATCTTCTAGCGATGGCAGGATGCGAATCTTGCAGGTCACAGGTCTGCGTGTCGGGCCCCCAGGGTCTTaGTCAGGAGCCTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: VSSSDGRMRILQVTGLRVGPPGS*SGASLF
Trigger: AAAGAGGGAGGCTCCTGACCAAGACCCTGGGGGCCC...GACACGCAGACCTGTGACCTGCAAGATTCGCATCCTGCCATCGCTAGAAGATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR TCA 90 bp CAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGCTCGCTCTGCGTCTaGAGTCCCCATCTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: QPWVRVGGVFIAQYQCQVGSLCV*SPHLED
Trigger: GTCTTCCAGATGGGGACTTCAGACGCAGAGCGAGCC...AACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358896.10
ENST00000565263.6
CDS-3UTR TCA 90 bp CCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCAGGCTCGCTCTGCGTCTaGAGTCCCCATCTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PGKTSKLFNGIWFMLWHPGSLCV*SPHLED
Trigger: GTCTTCCAGATGGGGACTTCAGACGCAGAGCGAGCC...TGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp AGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACACAGCTGACAGGATGCTaGGGTCGCTCCTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: RQDQQTVQRHLVHAVASTQLTGC*GRSSRF
Trigger: GAAGCGGGAGGAGCGACCTCAGCATCCTGTCAGCTG...TGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp ATGCCAGTCCTCTCTATCCGCTTCACAAGGCTCAGGGTATCTTCTAGCGATGGCGTCCATGCTCTAGGCTaGTGGCCCCTGCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: MPVLSIRFTRLRVSSSDGVHALG*WPLPGH
Trigger: ATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGAC...GCCATCGCTAGAAGATACCCTGAGCCTTGTGAAGCGGATAGAGAGGACTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR GCA 90 bp AGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACGCAGGATGCGAATCTTaGAGGTCACAGGTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: RLMAPARTSNFCQARPANAGCES*RSQVCV
Trigger: CACGCAGACCTGTGACCTGCAAGATTCGCATCCTGC...GTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp AGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACCTGCGATGGCAGCAATaGCAGTCCTCTCTATCCGCT +
Preference number: 4 (lower is better)
Translates to: RLMAPARTSNFCQARPANLRWQQ*QSSLSA
Trigger: AGCGGATAGAGAGGACTGGCATTGCTGCCATCGCAG...GTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CCTGGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGCTTCCTCCCATGAACTaGGATGGCAGCAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: PGPCSRLMAPARTSNFCQLPPMN*DGSNAS
Trigger: ACTGGCATTGCTGCCATCGCAGTTCATGGGAGGAAG...CTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp AGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACCATCACGGAAGAGGCTaGCGTGGCTTGTCGAAAGTC +
Preference number: 4 (lower is better)
Translates to: RLMAPARTSNFCQARPANHHGRG*RGLSKV
Trigger: GACTTTCGACAAGCCACGGCAGCCTCTTCCGTGATG...GTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CCAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTGCTGGCTCCCCTGTCTaGTCTGAAGTCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PAVGEGRGCLYCTVPMSGAGSPV*SEVLAE
Trigger: CTCAGCCAAGACTTCAGAGCAGACAGGGGAGCCAGC...ACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR GCA 90 bp ACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGTTCATACACAGGCTGTaGCAACTTCTCCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: TASGSCCGIHSHLSTRPMFIHRL*QLLPPA
Trigger: TGCCGGAGGGAGAAGTTGGCACAGCCTGTGTATGAA...CATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp GCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCCAGACAGACGATGGCTaGAGCCTGCTCCGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: ARQDQQTVQRHLVHAVASQTDDG*SLLRQF
Trigger: AAACTGGCGGAGCAGGCTGCAGCCATCGTCTGTCTG...GGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp ACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGTCCCTCTTTCGCTTGTaGAAGGAAGGGCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TASGSCCGIHSHLSTRPMSLFRL*KEGLSS
Trigger: TGAGGAGAGCCCTTCCTTGCACAAGCGAAAGAGGGA...CATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp GTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTGCGGCCCCTGGTCCATaGTCTAGGCTGATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: VGGVFIAQYQCQVGELPPAAPGP*SRLMAP
Trigger: AGGGGCCATCAGCCTAGAGCATGGACCAGGGGCCGC...AGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CCA 90 bp AGCAGCCAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTGGCCAGCAGCCTCATTaGAAGAGTCCCTACCCGAAC +
Preference number: 4 (lower is better)
Translates to: SSQPWVRVGGVFIAQYQCGQQPH*KSPYPN
Trigger: GTTCGGGTAGGGACTCTTCCAATGAGGCTGCTGGCC...ACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTGGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CCA 90 bp AGCAGCCAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTTGGAGCAACCTTCCCTaGGGCGACTCCAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SSQPWVRVGGVFIAQYQCWSNLP*GDSSCS
Trigger: AGAACAGCTGGAGTCGCCCCAGGGAAGGTTGCTCCA...ACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTGGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CCA 90 bp CAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGAAGACTGGGCAGCATaGAGCAACCTTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QPWVRVGGVFIAQYQCQVEDWAA*SNLPWG
Trigger: GCCCCAGGGAAGGTTGCTCCATGCTGCCCAGTCTTC...AACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CCA 90 bp CCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCAGAAGACTGGGCAGCATaGAGCAACCTTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PGKTSKLFNGIWFMLWHPEDWAA*SNLPWG
Trigger: GCCCCAGGGAAGGTTGCTCCATGCTGCCCAGTCTTC...TGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CCTGGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGCATCCAGCTCCTGTGTaGTCTCCTCATAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PGPCSRLMAPARTSNFCQHPAPV*SPHRRH
Trigger: GTGCCTTCTATGAGGAGACCACACAGGAGCTGGATG...CTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp AGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGAGAGCCTGGCCTGCTaGGCATCCAGCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RQDQQTVQRHLVHAVASTESLAC*ASSSCV
Trigger: CACACAGGAGCTGGATGCCCAGCAGGCCAGGCTCTC...TGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTGAGAGCCTGGCCTGCTaGGCATCCAGCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GEGRGCLYCTVPMSGWGVESLAC*ASSSCV
Trigger: CACACAGGAGCTGGATGCCCAGCAGGCCAGGCTCTC...AACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CCA 90 bp GTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTCCCTCAGGGAGGCCCTaGCTCCGCAGACAGACGATG +
Preference number: 4 (lower is better)
Translates to: VGGVFIAQYQCQVGELPPPSGRP*LRRQTM
Trigger: CATCGTCTGTCTGCGGAGCCAGGGCCTCCCTGAGGG...AGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR TCA 90 bp ACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGTGCACTGAATCATCTTaGGGTCGATCAGCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: TASGSCCGIHSHLSTRPMCTESS*GRSAPH
Trigger: GTGAGGAGCTGATCGACCTCAAGATGATTCAGTGCA...CATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR TCA 90 bp CTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGAAGATGCCCAAGGCTaGAGCAGCCAGCCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LTSARQDQQTVQRHLVHAEDAQG*SSQPWV
Trigger: CACCCACGGCTGGCTGCTTCAGCCTTGGGCATCTTC...AGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR GCA 90 bp GCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCGCTTCTTCCTCACGGTaGTCCAGCTCCACACACCGT +
Preference number: 4 (lower is better)
Translates to: ARPANCSTASGSCCGIHSASSSR*SSSTHR
Trigger: ACGGTGTGTGGAGCTGGAGCACCGTGAGGAAGAAGC...GCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358896.10
ENST00000565263.6
CDS-3UTR GCA 90 bp AAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCCCTGCGATGGCAGCAATaGCAGTCCTCTCTATCCGCT +
Preference number: 4 (lower is better)
Translates to: KENLTLSLRSTKGARIHPLRWQQ*QSSLSA
Trigger: AGCGGATAGAGAGGACTGGCATTGCTGCCATCGCAG...GGGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp AGCAGCCAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCATCACGGAAGAGGCTaGCGTGGCTTGTCGAAAGTC +
Preference number: 4 (lower is better)
Translates to: SSQPWVRVGGVFIAQYQCHHGRG*RGLSKV
Trigger: GACTTTCGACAAGCCACGGCAGCCTCTTCCGTGATG...ACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTGGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR GCA 90 bp CCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCAGCTGGCTCCCCTGTCTaGTCTGAAGTCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PGKTSKLFNGIWFMLWHPAGSPV*SEVLAE
Trigger: CTCAGCCAAGACTTCAGAGCAGACAGGGGAGCCAGC...TGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCAACGATGGCTGCAGCCTaGTCCGCCAGTTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: PGKTSKLFNGIWFMLWHPTMAAA*SASFLD
Trigger: GTCCAAGAAACTGGCGGAGCAGGCTGCAGCCATCGT...TGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGACGATGGCTGCAGCCTaGTCCGCCAGTTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LLPGKTSKLFNGIWFMLWTMAAA*SASFLD
Trigger: GTCCAAGAAACTGGCGGAGCAGGCTGCAGCCATCGT...CCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp ACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTCAGACAGACGATGGCTaGAGCCTGCTCCGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: TSKLFNGIWFMLWHPQPPQTDDG*SLLRQF
Trigger: AAACTGGCGGAGCAGGCTGCAGCCATCGTCTGTCTG...AGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp TGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACAGACAGACGATGGCTaGAGCCTGCTCCGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: WPLPGHLTSARQDQQTVQQTDDG*SLLRQF
Trigger: AAACTGGCGGAGCAGGCTGCAGCCATCGTCTGTCTG...TTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCACGGCATCTGGTTCATaGTGTGGCATCCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: QRELDPVTQIHQRGQDPPTASGS*CGIHSH
Trigger: GTGGCTGTGGATGCCACAGCATGAACCAGATGCCGT...GGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp TCTAGTAGGCACATCTTAGGGGTGATCTGGGCTGGGTATGCTCTCCGGTCAAACGGCCAGCAGCCTCATTaGAAGAGTCCCTACCCGAAC +
Preference number: 4 (lower is better)
Translates to: SSRHILGVIWAGYALRSNGQQPH*KSPYPN
Trigger: GTTCGGGTAGGGACTCTTCCAATGAGGCTGCTGGCC...GTTTGACCGGAGAGCATACCCAGCCCAGATCACCCCTAAGATGTGCCTACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CCA 90 bp TCTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGGAGGGGTGTTCTCGTAGCATCTaGCACAAGCAGTACTTGGTG +
Preference number: 4 (lower is better)
Translates to: SGSCCGIHSHLSTRPMEGCSRSI*HKQYLV
Trigger: CACCAAGTACTGCTTGTGCCAGATGCTACGAGAACA...CCCCTCCATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGTGGAGCAACCTTCCCTaGGGCGACTCCAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LLPGKTSKLFNGIWFMLWWSNLP*GDSSCS
Trigger: AGAACAGCTGGAGTCGCCCCAGGGAAGGTTGCTCCA...CCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGAAGACTGGGCAGCATaGAGCAACCTTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PGHLTSARQDQQTVQRHLEDWAA*SNLPWG
Trigger: GCCCCAGGGAAGGTTGCTCCATGCTGCCCAGTCTTC...CAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CCAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTATCTTAGGGGTGATCTaGGCTGGGTATGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: PAVGEGRGCLYCTVPMSGILGVI*AGYALR
Trigger: CCGGAGAGCATACCCAGCCCAGATCACCCCTAAGAT...ACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CCA 90 bp TTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCATCCGCAGACAGACGATaGCTGCAGCCTGCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: FQRELDPVTQIHQRGQDPSADRR*LQPAPP
Trigger: TGGCGGAGCAGGCTGCAGCCATCGTCTGTCTGCGGA...TGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTCTAGCTCCTGAGCTCTaGGGCCCCCAGGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: VGGVFIAQYQCQVGELPPLAPEL*GPQGLG
Trigger: ACCAAGACCCTGGGGGCCCCAGAGCTCAGGAGCTAG...AGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR TCA 90 bp GCCCCTGGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCACAACTCTCTTGCACTaGATCATCTTGAGGTCGATC +
Preference number: 4 (lower is better)
Translates to: APGPCSRLMAPARTSNFCTTLLH*IILRSI
Trigger: GATCGACCTCAAGATGATTCAGTGCAAGAGAGTTGT...GCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACCAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR TCA 90 bp GCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCAATCTTGTCAGGGTCTaGCAGCAGGGCAGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: ARPANCSTASGSCCGIHSNLVRV*QQGSSH
Trigger: ATGGGAGCTGCCCTGCTGTCAGACCCTGACAAGATT...GCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp CCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCAAATCTTGTCAGGGTCTaGCAGCAGGGCAGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PGKTSKLFNGIWFMLWHPNLVRV*QQGSSH
Trigger: ATGGGAGCTGCCCTGCTGTCAGACCCTGACAAGATT...TGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp TGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCGCAGGATGCGAATCTTaGAGGTCACAGGTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: CQARPANCSTASGSCCGIAGCES*RSQVCV
Trigger: CACGCAGACCTGTGACCTGCAAGATTCGCATCCTGC...GATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACTGCGATGGCAGCAATaGCAGTCCTCTCTATCCGCT +
Preference number: 4 (lower is better)
Translates to: PGKTSKLFNGIWFMLWHPLRWQQ*QSSLSA
Trigger: AGCGGATAGAGAGGACTGGCATTGCTGCCATCGCAG...TGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCACGGAAGAGGCTaGCGTGGCTTGTCGAAAGTC +
Preference number: 4 (lower is better)
Translates to: LLPGKTSKLFNGIWFMLWHHGRG*RGLSKV
Trigger: GACTTTCGACAAGCCACGGCAGCCTCTTCCGTGATG...CCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTTGGGTTCCACATGGCTaGTCGGGCCACCATCACGGA +
Preference number: 4 (lower is better)
Translates to: LTSARQDQQTVQRHLVHAWVPHG*SGHHHG
Trigger: TCCGTGATGGTGGCCCGAGCAGCCATGTGGAACCCA...AGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp AGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACACAGACAGACGATGGCTaGAGCCTGCTCCGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: RQDQQTVQRHLVHAVASTQTDDG*SLLRQF
Trigger: AAACTGGCGGAGCAGGCTGCAGCCATCGTCTGTCTG...TGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp AGCAGCCAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTTCCCTCTTTCGCTTGTaGAAGGAAGGGCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSQPWVRVGGVFIAQYQCSLFRL*KEGLSS
Trigger: TGAGGAGAGCCCTTCCTTGCACAAGCGAAAGAGGGA...ACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTGGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR GCA 90 bp TGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAAACGGCATCTGGTTCATaGTGTGGCATCCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: WPLPGHLTSARQDQQTVQTASGS*CGIHSH
Trigger: GTGGCTGTGGATGCCACAGCATGAACCAGATGCCGT...TTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp ACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGAGGACATCTAACTTCTaGCAGGCAAGACCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: TASGSCCGIHSHLSTRPMRTSNF*QARPAN
Trigger: GTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCT...CATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTGGCCAGCAGCCTCATTaGAAGAGTCCCTACCCGAAC +
Preference number: 4 (lower is better)
Translates to: GEGRGCLYCTVPMSGWGVGQQPH*KSPYPN
Trigger: GTTCGGGTAGGGACTCTTCCAATGAGGCTGCTGGCC...AACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CCA 90 bp TCTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGGAGGGGCTCCCATTCCTCCCTTaGTGGAATATTGTTTTGGAC +
Preference number: 4 (lower is better)
Translates to: SGSCCGIHSHLSTRPMEGLPFLP*WNIVLD
Trigger: GTCCAAAACAATATTCCACCAAGGGAGGAATGGGAG...CCCCTCCATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCTCCCATGAACTGCGATaGCAGCAATGCCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: ARQDQQTVQRHLVHAVASSHELR*QQCQSS
Trigger: AGAGGACTGGCATTGCTGCCATCGCAGTTCATGGGA...GGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GTGCTGAGGATCTTCTCAATCTTGTCAGGGTCTGACAGCAGGGCAGCTCCCATTCGGAAGAGGCTGCCGTaGCTTGTCGAAAGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: VLRIFSILSGSDSRAAPIRKRLP*LVESPL
Trigger: TAGAGGACTTTCGACAAGCCACGGCAGCCTCTTCCG...AATGGGAGCTGCCCTGCTGTCAGACCCTGACAAGATTGAGAAGATCCTCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CCA 90 bp GGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAGGCACAAGCAGTACTTaGTGTTGGTGTAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: GPCSRLMAPARTSNFCQAGTSST*CWCSGC
Trigger: ACAACCACTACACCAACACCAAGTACTGCTTGTGCC...TGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGTGGAGCAACCTTCCCTaGGGCGACTCCAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: PGHLTSARQDQQTVQRHLWSNLP*GDSSCS
Trigger: AGAACAGCTGGAGTCGCCCCAGGGAAGGTTGCTCCA...CAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp TTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCAGAAGACTGGGCAGCATaGAGCAACCTTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: FQRELDPVTQIHQRGQDPEDWAA*SNLPWG
Trigger: GCCCCAGGGAAGGTTGCTCCATGCTGCCCAGTCTTC...TGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp AAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCCCATCCAGCTCCTGTGTaGTCTCCTCATAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: KENLTLSLRSTKGARIHPHPAPV*SPHRRH
Trigger: GTGCCTTCTATGAGGAGACCACACAGGAGCTGGATG...GGGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp TTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCATCTTGGCTGAGAGCCTaGCCTGCTGGGCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: FQRELDPVTQIHQRGQDPSWLRA*PAGHPA
Trigger: AGCTGGATGCCCAGCAGGCCAGGCTCTCAGCCAAGA...TGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp TGGTTGTCATACTGCACCGCGTATCTGATGTATTTCTGCATGACCTCCTCCAGGTCTTGGCTGAGAGCCTaGCCTGCTGGGCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: WLSYCTAYLMYFCMTSSRSWLRA*PAGHPA
Trigger: AGCTGGATGCCCAGCAGGCCAGGCTCTCAGCCAAGA...CCTGGAGGAGGTCATGCAGAAATACATCAGATACGCGGTGCAGTATGACAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CCA 90 bp TGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAATCTGCTCTGAAGTCTTaGCTGAGAGCCTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: WPLPGHLTSARQDQQTVQSALKS*LRAWPA
Trigger: AGCAGGCCAGGCTCTCAGCCAAGACTTCAGAGCAGA...TTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp ACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTAGGGGTGATCTGGGCTaGGTATGCTCTCCGGTCAAA +
Preference number: 4 (lower is better)
Translates to: TSKLFNGIWFMLWHPQPPRGDLG*VCSPVK
Trigger: TTTGACCGGAGAGCATACCCAGCCCAGATCACCCCT...AGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGATCTTAGGGGTGATCTaGGCTGGGTATGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: GKTSKLFNGIWFMLWHPQILGVI*AGYALR
Trigger: CCGGAGAGCATACCCAGCCCAGATCACCCCTAAGAT...CTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp CACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCTCCACACACCGTACTaGGCCTCGCCAGCCACCGTA +
Preference number: 4 (lower is better)
Translates to: HLKSSCFQRELDPVTQIHLHTPY*ASPATV
Trigger: TACGGTGGCTGGCGAGGCTCAGTACGGTGTGTGGAG...GTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358896.10
CDS-3UTR TCA 90 bp TTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCATCCCGCTTCCTCCCATaGACTGCGATGGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: FQRELDPVTQIHQRGQDPSRFLP*TAMAAM
Trigger: CATTGCTGCCATCGCAGTTCATGGGAGGAAGCGGGA...TGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp CTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTTCCCGCTTCCTCCCATaGACTGCGATGGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: LTSARQDQQTVQRHLVHASRFLP*TAMAAM
Trigger: CATTGCTGCCATCGCAGTTCATGGGAGGAAGCGGGA...AGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp ACAGGTCTGCGTGTCCCTTTAACAAGAGTGCTGAGGATCTTCTCAATCTTGTCACAGCTGACAGGATGCTaGGGTCGCTCCTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: TGLRVPLTRVLRIFSILSQLTGC*GRSSRF
Trigger: GAAGCGGGAGGAGCGACCTCAGCATCCTGTCAGCTG...TGACAAGATTGAGAAGATCCTCAGCACTCTTGTTAAAGGGACACGCAGACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR TCA 90 bp CACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAGCTGACAGGATGCTaGGGTCGCTCCTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: HLKSSCFQRELDPVTQIHQLTGC*GRSSRF
Trigger: GAAGCGGGAGGAGCGACCTCAGCATCCTGTCAGCTG...GTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp AGCAGCCAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTATCCTCCGTTGGCTATaGCAGGAATGGAGAGGGTAT +
Preference number: 4 (lower is better)
Translates to: SSQPWVRVGGVFIAQYQCILRWL*QEWRGY
Trigger: ATACCCTCTCCATTCCTGTCATAGCCAACGGAGGAT...ACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTGGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR TCA 90 bp CTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGGAGGGGTTTTTCAAAGAGAACTTaGCCCTGTCACTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: LVHAVASTATLAPGPWRGFSKRT*PCHSDP
Trigger: TGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAA...ACCCCTCCATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp GGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGAAGACCACCCTGTTCTaGTCTCTTTCACAGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GKTSKLFNGIWFMLWHPQKTTLF*SLSQVR
Trigger: CCGCACCTGTGAAAGAGAGCAGAACAGGGTGGTCTT...CTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp ACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTCTTCCTCCCATGAACTaGGATGGCAGCAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: TSKLFNGIWFMLWHPQPPLPPMN*DGSNAS
Trigger: ACTGGCATTGCTGCCATCGCAGTTCATGGGAGGAAG...AGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp TGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCTTCCTCCCATGAACTaGGATGGCAGCAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: CQARPANCSTASGSCCGILPPMN*DGSNAS
Trigger: ACTGGCATTGCTGCCATCGCAGTTCATGGGAGGAAG...GATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp AGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACACATCACGGAAGAGGCTaGCGTGGCTTGTCGAAAGTC +
Preference number: 4 (lower is better)
Translates to: RQDQQTVQRHLVHAVASTHHGRG*RGLSKV
Trigger: GACTTTCGACAAGCCACGGCAGCCTCTTCCGTGATG...TGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp AGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACTATCTGATGTATTTCTaGATGACCTCCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RLMAPARTSNFCQARPANYLMYF*MTSSRG
Trigger: GCCCCTGGAGGAGGTCATGCAGAAATACATCAGATA...GTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCATTCATACACAGGCTGTaGCAACTTCTCCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: PGKTSKLFNGIWFMLWHPFIHRL*QLLPPA
Trigger: TGCCGGAGGGAGAAGTTGGCACAGCCTGTGTATGAA...TGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp ACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTCATTTTCTACAAGCCTaGCCACAGCAAGGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: TSKLFNGIWFMLWHPQPPHFLQA*PQQGLA
Trigger: AGCGAGCCCTTGCTGTGGCCAGGCTTGTAGAAAATG...AGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGTCCCATGAACTGCGATaGCAGCAATGCCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLPGKTSKLFNGIWFMLWSHELR*QQCQSS
Trigger: AGAGGACTGGCATTGCTGCCATCGCAGTTCATGGGA...CCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp ACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTTCCCATGAACTGCGATaGCAGCAATGCCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TSKLFNGIWFMLWHPQPPSHELR*QQCQSS
Trigger: AGAGGACTGGCATTGCTGCCATCGCAGTTCATGGGA...AGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTCGGAAGAGGCTGCCGTaGCTTGTCGAAAGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: GEGRGCLYCTVPMSGWGVRKRLP*LVESPL
Trigger: TAGAGGACTTTCGACAAGCCACGGCAGCCTCTTCCG...AACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CCA 90 bp AGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCTCGTAGCATCTaGCACAAGCAGTACTTGGTG +
Preference number: 4 (lower is better)
Translates to: RLMAPARTSNFCQARPANCSRSI*HKQYLV
Trigger: CACCAAGTACTGCTTGTGCCAGATGCTACGAGAACA...GTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp TGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAAATTTCCCGGGAAGACTaGGCAGCATGGAGCAACCTT +
Preference number: 4 (lower is better)
Translates to: WPLPGHLTSARQDQQTVQISRED*AAWSNL
Trigger: AAGGTTGCTCCATGCTGCCCAGTCTTCCCGGGAAAT...TTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCAGCTCCTGTGTaGTCTCCTCATAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LLPGKTSKLFNGIWFMLWHPAPV*SPHRRH
Trigger: GTGCCTTCTATGAGGAGACCACACAGGAGCTGGATG...CCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp ACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTCATCCAGCTCCTGTGTaGTCTCCTCATAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: TSKLFNGIWFMLWHPQPPHPAPV*SPHRRH
Trigger: GTGCCTTCTATGAGGAGACCACACAGGAGCTGGATG...AGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp AGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAATCTTAGGGGTGATCTaGGCTGGGTATGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: RQDQQTVQRHLVHAVASTILGVI*AGYALR
Trigger: CCGGAGAGCATACCCAGCCCAGATCACCCCTAAGAT...TGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CATTCCTCCCTTGGTGGAATATTGTTTTGGACAGCCCATGTTGACATCAATACCCCCTCAGGGAGGCCCTaGCTCCGCAGACAGACGATG +
Preference number: 4 (lower is better)
Translates to: HSSLGGILFWTAHVDINTPSGRP*LRRQTM
Trigger: CATCGTCTGTCTGCGGAGCCAGGGCCTCCCTGAGGG...GGTATTGATGTCAACATGGGCTGTCCAAAACAATATTCCACCAAGGGAGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CCA 90 bp CACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCTAGCTCCTGAGCTCTaGGGCCCCCAGGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: HLKSSCFQRELDPVTQIHLAPEL*GPQGLG
Trigger: ACCAAGACCCTGGGGGCCCCAGAGCTCAGGAGCTAG...GTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp TCCCATGAACTGCGATGGCAGCAATGCCAGTCCTCTCTATCCGCTTCACAAGGCCTGTTCAACGGCATCTaGTTCATGCTGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: SHELRWQQCQSSLSASQGLFNGI*FMLWHP
Trigger: TGGATGCCACAGCATGAACCAGATGCCGTTGAACAG...GCCTTGTGAAGCGGATAGAGAGGACTGGCATTGCTGCCATCGCAGTTCATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR TCA 90 bp CTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGTGCACTGAATCATCTTaGGGTCGATCAGCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LLPGKTSKLFNGIWFMLWCTESS*GRSAPH
Trigger: GTGAGGAGCTGATCGACCTCAAGATGATTCAGTGCA...CCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR TCA 90 bp AGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACACAACTCTCTTGCACTaGATCATCTTGAGGTCGATC +
Preference number: 4 (lower is better)
Translates to: RLMAPARTSNFCQARPANTTLLH*IILRSI
Trigger: GATCGACCTCAAGATGATTCAGTGCAAGAGAGTTGT...GTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR TCA 90 bp CTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTAATCTTGTCAGGGTCTaGCAGCAGGGCAGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LTSARQDQQTVQRHLVHANLVRV*QQGSSH
Trigger: ATGGGAGCTGCCCTGCTGTCAGACCCTGACAAGATT...AGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp TGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCTGTTGGATGTGGTCATaGGATCCTCCGTTGGCTATG +
Preference number: 4 (lower is better)
Translates to: CQARPANCSTASGSCCGICWMWS*DPPLAM
Trigger: CATAGCCAACGGAGGATCTCATGACCACATCCAACA...GATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp CTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGTGTTGGATGTGGTCATaGGATCCTCCGTTGGCTATG +
Preference number: 4 (lower is better)
Translates to: LLPGKTSKLFNGIWFMLWCWMWS*DPPLAM
Trigger: CATAGCCAACGGAGGATCTCATGACCACATCCAACA...CCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp CCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAAAGTCCACTGTGCTaGGCACCTCTCACAGTAAAC +
Preference number: 4 (lower is better)
Translates to: PGKTSKLFNGIWFMLWHPQSPLC*APLTVN
Trigger: GTTTACTGTGAGAGGTGCTCAGCACAGTGGACTTTG...TGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR GCA 90 bp GGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTAAGACCACCCTGTTCTaGTCTCTTTCACAGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GEGRGCLYCTVPMSGWGVKTTLF*SLSQVR
Trigger: CCGCACCTGTGAAAGAGAGCAGAACAGGGTGGTCTT...AACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR GCA 90 bp AGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAAAGACCACCCTGTTCTaGTCTCTTTCACAGGTGCGG +
Preference number: 4 (lower is better)
Translates to: RQDQQTVQRHLVHAVASTKTTLF*SLSQVR
Trigger: CCGCACCTGTGAAAGAGAGCAGAACAGGGTGGTCTT...TGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp TGGTTGTCATACTGCACCGCGTATCTGATGTATTTCTGCATGACCTCCTCCAGGGCAGGATGCGAATCTTaGAGGTCACAGGTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: WLSYCTAYLMYFCMTSSRAGCES*RSQVCV
Trigger: CACGCAGACCTGTGACCTGCAAGATTCGCATCCTGC...CCTGGAGGAGGTCATGCAGAAATACATCAGATACGCGGTGCAGTATGACAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR GCA 90 bp TTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACTGCGATGGCAGCAATaGCAGTCCTCTCTATCCGCT +
Preference number: 4 (lower is better)
Translates to: FQRELDPVTQIHQRGQDPLRWQQ*QSSLSA
Trigger: AGCGGATAGAGAGGACTGGCATTGCTGCCATCGCAG...TGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACTGGGTTCCACATGGCTaGTCGGGCCACCATCACGGA +
Preference number: 4 (lower is better)
Translates to: HLKSSCFQRELDPVTQIHWVPHG*SGHHHG
Trigger: TCCGTGATGGTGGCCCGAGCAGCCATGTGGAACCCA...GTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CCAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTATCTGATGTATTTCTaGATGACCTCCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PAVGEGRGCLYCTVPMSGYLMYF*MTSSRG
Trigger: GCCCCTGGAGGAGGTCATGCAGAAATACATCAGATA...ACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR GCA 90 bp ACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCAGCTGGCTCCCCTGTCTaGTCTGAAGTCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TSNFCQARPANCSTASGSAGSPV*SEVLAE
Trigger: CTCAGCCAAGACTTCAGAGCAGACAGGGGAGCCAGC...TGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGTTCATACACAGGCTGTaGCAACTTCTCCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: PVFKENLTLSLRSTKGARFIHRL*QLLPPA
Trigger: TGCCGGAGGGAGAAGTTGGCACAGCCTGTGTATGAA...CCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp GTCGAAAGTCCTCTATGTCCGAATACTGTTGGATGTGGTCATGAGATCCTCCGTACGATGGCTGCAGCCTaGTCCGCCAGTTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: VESPLCPNTVGCGHEILRTMAAA*SASFLD
Trigger: GTCCAAGAAACTGGCGGAGCAGGCTGCAGCCATCGT...ACGGAGGATCTCATGACCACATCCAACAGTATTCGGACATAGAGGACTTTCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR GCA 90 bp CCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGTCCCTCTTTCGCTTGTaGAAGGAAGGGCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PVFKENLTLSLRSTKGARSLFRL*KEGLSS
Trigger: TGAGGAGAGCCCTTCCTTGCACAAGCGAAAGAGGGA...CCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp ACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCAGGCCAGCAGCCTCATTaGAAGAGTCCCTACCCGAAC +
Preference number: 4 (lower is better)
Translates to: TSNFCQARPANCSTASGSGQQPH*KSPYPN
Trigger: GTTCGGGTAGGGACTCTTCCAATGAGGCTGCTGGCC...TGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGTCCCATGAACTGCGATaGCAGCAATGCCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PGHLTSARQDQQTVQRHLSHELR*QQCQSS
Trigger: AGAGGACTGGCATTGCTGCCATCGCAGTTCATGGGA...CAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp TGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCTTGAGGAAGATAGATaGGTTCCACATGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: CQARPANCSTASGSCCGILEEDR*VPHGCS
Trigger: CGAGCAGCCATGTGGAACCCATCTATCTTCCTCAAG...GATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp AGCGATGGCAGGATGCGAATCTTGCAGGTCACAGGTCTGCGTGTCCCTTTAACACTTGAGGAAGATAGATaGGTTCCACATGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SDGRMRILQVTGLRVPLTLEEDR*VPHGCS
Trigger: CGAGCAGCCATGTGGAACCCATCTATCTTCCTCAAG...TGTTAAAGGGACACGCAGACCTGTGACCTGCAAGATTCGCATCCTGCCATCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CCA 90 bp GGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTATTTCCCGGGAAGACTaGGCAGCATGGAGCAACCTT +
Preference number: 4 (lower is better)
Translates to: GEGRGCLYCTVPMSGWGVISRED*AAWSNL
Trigger: AAGGTTGCTCCATGCTGCCCAGTCTTCCCGGGAAAT...AACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CCA 90 bp CTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTAGGGGTGATCTGGGCTaGGTATGCTCTCCGGTCAAA +
Preference number: 4 (lower is better)
Translates to: LTSARQDQQTVQRHLVHARGDLG*VCSPVK
Trigger: TTTGACCGGAGAGCATACCCAGCCCAGATCACCCCT...AGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCTGTTCAACGGCATCTaGTTCATGCTGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: GKTSKLFNGIWFMLWHPQLFNGI*FMLWHP
Trigger: TGGATGCCACAGCATGAACCAGATGCCGTTGAACAG...CTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp ACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTCTGTTCAACGGCATCTaGTTCATGCTGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: TSKLFNGIWFMLWHPQPPLFNGI*FMLWHP
Trigger: TGGATGCCACAGCATGAACCAGATGCCGTTGAACAG...AGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp AGCAGCCAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTTTACAGCCTCGCAGCTaGACTCTTAAAAAGAACCTC +
Preference number: 4 (lower is better)
Translates to: SSQPWVRVGGVFIAQYQCLQPRS*TLKKNL
Trigger: GAGGTTCTTTTTAAGAGTTCAGCTGCGAGGCTGTAA...ACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTGGCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358896.10
CDS-3UTR TCA 90 bp CTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGTTGGACAGCCCATGTTaGCATCAATACCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: LLPGKTSKLFNGIWFMLWLDSPC*HQYQPH
Trigger: ATGTGGCTGGTATTGATGTCAACATGGGCTGTCCAA...CCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp ACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTTTGGACAGCCCATGTTaGCATCAATACCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: TSKLFNGIWFMLWHPQPPLDSPC*HQYQPH
Trigger: ATGTGGCTGGTATTGATGTCAACATGGGCTGTCCAA...AGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp CACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACTCCCGCTTCCTCCCATaGACTGCGATGGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: HLKSSCFQRELDPVTQIHSRFLP*TAMAAM
Trigger: CATTGCTGCCATCGCAGTTCATGGGAGGAAGCGGGA...GTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp CCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGTGTTGGATGTGGTCATaGGATCCTCCGTTGGCTATG +
Preference number: 4 (lower is better)
Translates to: PGHLTSARQDQQTVQRHLCWMWS*DPPLAM
Trigger: CATAGCCAACGGAGGATCTCATGACCACATCCAACA...CAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp AGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACATGTTGGATGTGGTCATaGGATCCTCCGTTGGCTATG +
Preference number: 4 (lower is better)
Translates to: RQDQQTVQRHLVHAVASTCWMWS*DPPLAM
Trigger: CATAGCCAACGGAGGATCTCATGACCACATCCAACA...TGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp CCTGGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGTTGATATCTCGCAGCTaGACTCTTAAAAAGAACCTC +
Preference number: 4 (lower is better)
Translates to: PGPCSRLMAPARTSNFCQLISRS*TLKKNL
Trigger: GAGGTTCTTTTTAAGAGTTCAGCTGCGAGATATCAA...CTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432752.5
ENST00000565263.6
CDS-3UTR TCA 90 bp GGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCATTGATATCTCGCAGCTaGACTCTTAAAAAGAACCTC +
Preference number: 4 (lower is better)
Translates to: GPCSRLMAPARTSNFCQALISRS*TLKKNL
Trigger: GAGGTTCTTTTTAAGAGTTCAGCTGCGAGATATCAA...TGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432752.5
ENST00000565263.6
CDS-3UTR GCA 90 bp CTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTAAGACCACCCTGTTCTaGTCTCTTTCACAGGTGCGG +
Preference number: 4 (lower is better)
Translates to: LTSARQDQQTVQRHLVHAKTTLF*SLSQVR
Trigger: CCGCACCTGTGAAAGAGAGCAGAACAGGGTGGTCTT...AGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp TACCACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCTGGGTTCCACATGGCTaGTCGGGCCACCATCACGGA +
Preference number: 4 (lower is better)
Translates to: YHLKSSCFQRELDPVTQIWVPHG*SGHHHG
Trigger: TCCGTGATGGTGGCCCGAGCAGCCATGTGGAACCCA...GATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp AGCTCCCATTCCTCCCTTGGTGGAATATTGTTTTGGACAGCCCATGTTGACATCACGGCATCTGGTTCATaGTGTGGCATCCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: SSHSSLGGILFWTAHVDITASGS*CGIHSH
Trigger: GTGGCTGTGGATGCCACAGCATGAACCAGATGCCGT...GATGTCAACATGGGCTGTCCAAAACAATATTCCACCAAGGGAGGAATGGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR GCA 90 bp GTATCTTCTAGCGATGGCAGGATGCGAATCTTGCAGGTCACAGGTCTGCGTGTCAGGACATCTAACTTCTaGCAGGCAAGACCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: VSSSDGRMRILQVTGLRVRTSNF*QARPAN
Trigger: GTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCT...GACACGCAGACCTGTGACCTGCAAGATTCGCATCCTGCCATCGCTAGAAGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CCA 90 bp GCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCCCATTCCTCCCTTGGTaGAATATTGTTTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: ARQDQQTVQRHLVHAVASPFLPW*NIVLDS
Trigger: GCTGTCCAAAACAATATTCCACCAAGGGAGGAATGG...GGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp AAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCCCTCCCATTCCTCCCTTaGTGGAATATTGTTTTGGAC +
Preference number: 4 (lower is better)
Translates to: KENLTLSLRSTKGARIHPLPFLP*WNIVLD
Trigger: GTCCAAAACAATATTCCACCAAGGGAGGAATGGGAG...GGGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTCTTGAGGAAGATAGATaGGTTCCACATGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GEGRGCLYCTVPMSGWGVLEEDR*VPHGCS
Trigger: CGAGCAGCCATGTGGAACCCATCTATCTTCCTCAAG...AACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CCA 90 bp CCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCAGGCACAAGCAGTACTTaGTGTTGGTGTAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: PGKTSKLFNGIWFMLWHPGTSST*CWCSGC
Trigger: ACAACCACTACACCAACACCAAGTACTGCTTGTGCC...TGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp TGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCGGCACAAGCAGTACTTaGTGTTGGTGTAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: CQARPANCSTASGSCCGIGTSST*CWCSGC
Trigger: ACAACCACTACACCAACACCAAGTACTGCTTGTGCC...GATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
3UTR CAA 72 bp CTCAGGGTATCTTCTAGCGATGGCAGGATGCGAATCTaGCAGGTCACAGGTCTGCGTGTCCCTTTAACAAGA +
Preference number: 4 (lower is better)
Translates to: LRVSSSDGRMRI*QVTGLRVPLTR
Trigger: TCTTGTTAAAGGGACACGCAGACCTGTGACCTGCAAGATTCGCATCCTGCCATCGCTAGAAGATACCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR TCA 90 bp TGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAAACAACTCTCTTGCACTaGATCATCTTGAGGTCGATC +
Preference number: 4 (lower is better)
Translates to: WPLPGHLTSARQDQQTVQTTLLH*IILRSI
Trigger: GATCGACCTCAAGATGATTCAGTGCAAGAGAGTTGT...TTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR TCA 90 bp CACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACAATCTTGTCAGGGTCTaGCAGCAGGGCAGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: HLKSSCFQRELDPVTQIHNLVRV*QQGSSH
Trigger: ATGGGAGCTGCCCTGCTGTCAGACCCTGACAAGATT...GTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp TGGTTGTCATACTGCACCGCGTATCTGATGTATTTCTGCATGACCTCCTCCAGGATCCTCCGTTGGCTATaGCAGGAATGGAGAGGGTAT +
Preference number: 4 (lower is better)
Translates to: WLSYCTAYLMYFCMTSSRILRWL*QEWRGY
Trigger: ATACCCTCTCCATTCCTGTCATAGCCAACGGAGGAT...CCTGGAGGAGGTCATGCAGAAATACATCAGATACGCGGTGCAGTATGACAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR GCA 90 bp GCTGCCGTGGCTTGTCGAAAGTCCTCTATGTCCGAATACTGTTGGATGTGGTCATATCTGATGTATTTCTaGATGACCTCCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: AAVACRKSSMSEYCWMWSYLMYF*MTSSRG
Trigger: GCCCCTGGAGGAGGTCATGCAGAAATACATCAGATA...TGACCACATCCAACAGTATTCGGACATAGAGGACTTTCGACAAGCCACGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR GCA 90 bp GGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTGAAAAGACGGCATCTGGTTCATaGTGTGGCATCCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: GVFIAQYQCQVGELPPEKTASGS*CGIHSH
Trigger: GTGGCTGTGGATGCCACAGCATGAACCAGATGCCGT...CTTTTCAGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR GCA 90 bp CTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGAGGGGGTGTCTTTATTaGACAGTACCAATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LLPGKTSKLFNGIWFMLWRGCLY*TVPMSG
Trigger: ACCTGACATTGGTACTGTGCAATAAAGACACCCCCT...CCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CCA 90 bp GCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCGGTGGAATATTGTTTTaGACAGCCCATGTTGACATC +
Preference number: 4 (lower is better)
Translates to: ARQDQQTVQRHLVHAVASGGILF*TAHVDI
Trigger: GATGTCAACATGGGCTGTCCAAAACAATATTCCACC...GGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CCTCATAGAAGGCACCAAGGCCAAAGGCCTCACAAATTTCCCGGGAAGACTGGGGGTGGAATATTGTTTTaGACAGCCCATGTTGACATC +
Preference number: 4 (lower is better)
Translates to: PHRRHQGQRPHKFPGKTGGGILF*TAHVDI
Trigger: GATGTCAACATGGGCTGTCCAAAACAATATTCCACC...CCCAGTCTTCCCGGGAAATTTGTGAGGCCTTTGGCCTTGGTGCCTTCTATGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CCA 90 bp ACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTCCATTCCTCCCTTGGTaGAATATTGTTTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: TSKLFNGIWFMLWHPQPPPFLPW*NIVLDS
Trigger: GCTGTCCAAAACAATATTCCACCAAGGGAGGAATGG...AGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp GTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTCTTGAGGAAGATAGATaGGTTCCACATGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: VGGVFIAQYQCQVGELPPLEEDR*VPHGCS
Trigger: CGAGCAGCCATGTGGAACCCATCTATCTTCCTCAAG...AGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CCA 90 bp GCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCAGCAGTACTTGGTGTTaGTGTAGTGGTTGTCATACT +
Preference number: 4 (lower is better)
Translates to: ARQDQQTVQRHLVHAVASSSTWC*CSGCHT
Trigger: AGTATGACAACCACTACACCAACACCAAGTACTGCT...GGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp AGCAGCCAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTAGCAGTACTTGGTGTTaGTGTAGTGGTTGTCATACT +
Preference number: 4 (lower is better)
Translates to: SSQPWVRVGGVFIAQYQCSSTWC*CSGCHT
Trigger: AGTATGACAACCACTACACCAACACCAAGTACTGCT...ACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTGGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CCA 90 bp AGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGGCACAAGCAGTACTTaGTGTTGGTGTAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: RQDQQTVQRHLVHAVASTGTSST*CWCSGC
Trigger: ACAACCACTACACCAACACCAAGTACTGCTTGTGCC...TGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACTCTGCTCTGAAGTCTTaGCTGAGAGCCTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: HLKSSCFQRELDPVTQIHSALKS*LRAWPA
Trigger: AGCAGGCCAGGCTCTCAGCCAAGACTTCAGAGCAGA...GTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACATCTTAGGGGTGATCTaGGCTGGGTATGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: HLKSSCFQRELDPVTQIHILGVI*AGYALR
Trigger: CCGGAGAGCATACCCAGCCCAGATCACCCCTAAGAT...GTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
3UTR CAA 72 bp CGTGGCTTGTCGAAAGTCCTCTATGTCCGAATACTGTaGGATGTGGTCATGAGATCCTCCGTTGGCTATGAC +
Preference number: 4 (lower is better)
Translates to: RGLSKVLYVRIL*DVVMRSSVGYD
Trigger: GTCATAGCCAACGGAGGATCTCATGACCACATCCAACAGTATTCGGACATAGAGGACTTTCGACAAGCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR TCA 90 bp CTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTTTGGACAGCCCATGTTaGCATCAATACCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: LTSARQDQQTVQRHLVHALDSPC*HQYQPH
Trigger: ATGTGGCTGGTATTGATGTCAACATGGGCTGTCCAA...AGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGCTCTCTTTCACAGGTaGGGAAGACAACTCGATCAT +
Preference number: 4 (lower is better)
Translates to: LTSARQDQQTVQRHLVHAALFHR*GRQLDH
Trigger: ATGATCGAGTTGTCTTCCGCACCTGTGAAAGAGAGC...AGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp CCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGAGGGGGTGTCTTTATTaGACAGTACCAATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PVFKENLTLSLRSTKGARRGCLY*TVPMSG
Trigger: ACCTGACATTGGTACTGTGCAATAAAGACACCCCCT...CCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CCA 90 bp GCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCGGTGGAATATTGTTTTaGACAGCCCATGTTGACATC +
Preference number: 4 (lower is better)
Translates to: ARPANCSTASGSCCGIHSGGILF*TAHVDI
Trigger: GATGTCAACATGGGCTGTCCAAAACAATATTCCACC...GCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCAAGCAGTACTTGGTGTTaGTGTAGTGGTTGTCATACT +
Preference number: 4 (lower is better)
Translates to: PGKTSKLFNGIWFMLWHPSSTWC*CSGCHT
Trigger: AGTATGACAACCACTACACCAACACCAAGTACTGCT...TGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp CACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACTGCACTGAATCATCTTaGGGTCGATCAGCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: HLKSSCFQRELDPVTQIHCTESS*GRSAPH
Trigger: GTGAGGAGCTGATCGACCTCAAGATGATTCAGTGCA...GTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR TCA 90 bp CACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACATCCTCCGTTGGCTATaGCAGGAATGGAGAGGGTAT +
Preference number: 4 (lower is better)
Translates to: HLKSSCFQRELDPVTQIHILRWL*QEWRGY
Trigger: ATACCCTCTCCATTCCTGTCATAGCCAACGGAGGAT...GTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp AGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACATTTTCAAAGAGAACTTaGCCCTGTCACTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: RQDQQTVQRHLVHAVASTFSKRT*PCHSDP
Trigger: TGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAA...TGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR TCA 90 bp CCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGTTTTCAAAGAGAACTTaGCCCTGTCACTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: PGHLTSARQDQQTVQRHLFSKRT*PCHSDP
Trigger: TGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAA...CAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp TTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCAAGGGGGTGTCTTTATTaGACAGTACCAATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: FQRELDPVTQIHQRGQDPRGCLY*TVPMSG
Trigger: ACCTGACATTGGTACTGTGCAATAAAGACACCCCCT...TGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CCA 90 bp AGCTCCCATTCCTCCCTTGGTGGAATATTGTTTTGGACAGCCCATGTTGACATCTGTTCTCGTAGCATCTaGCACAAGCAGTACTTGGTG +
Preference number: 4 (lower is better)
Translates to: SSHSSLGGILFWTAHVDICSRSI*HKQYLV
Trigger: CACCAAGTACTGCTTGTGCCAGATGCTACGAGAACA...GATGTCAACATGGGCTGTCCAAAACAATATTCCACCAAGGGAGGAATGGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CCA 90 bp GGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTGAAAAGCTGTTCAACGGCATCTaGTTCATGCTGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: GVFIAQYQCQVGELPPEKLFNGI*FMLWHP
Trigger: TGGATGCCACAGCATGAACCAGATGCCGTTGAACAG...CTTTTCAGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR TCA 90 bp TACCACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCATCCTCCGTTGGCTATaGCAGGAATGGAGAGGGTAT +
Preference number: 4 (lower is better)
Translates to: YHLKSSCFQRELDPVTQIILRWL*QEWRGY
Trigger: ATACCCTCTCCATTCCTGTCATAGCCAACGGAGGAT...GATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp GGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTGAAAAGGCTCTCTTTCACAGGTaGGGAAGACAACTCGATCAT +
Preference number: 4 (lower is better)
Translates to: GVFIAQYQCQVGELPPEKALFHR*GRQLDH
Trigger: ATGATCGAGTTGTCTTCCGCACCTGTGAAAGAGAGC...CTTTTCAGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR GCA 90 bp CATTCCTCCCTTGGTGGAATATTGTTTTGGACAGCCCATGTTGACATCAATACCGCTCTCTTTCACAGGTaGGGAAGACAACTCGATCAT +
Preference number: 4 (lower is better)
Translates to: HSSLGGILFWTAHVDINTALFHR*GRQLDH
Trigger: ATGATCGAGTTGTCTTCCGCACCTGTGAAAGAGAGC...GGTATTGATGTCAACATGGGCTGTCCAAAACAATATTCCACCAAGGGAGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR GCA 90 bp TACCACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCTATCTGATGTATTTCTaGATGACCTCCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: YHLKSSCFQRELDPVTQIYLMYF*MTSSRG
Trigger: GCCCCTGGAGGAGGTCATGCAGAAATACATCAGATA...GATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR GCA 90 bp TACCACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCAGGACATCTAACTTCTaGCAGGCAAGACCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: YHLKSSCFQRELDPVTQIRTSNF*QARPAN
Trigger: GTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCT...GATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CCA 90 bp CACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCCATTCCTCCCTTGGTaGAATATTGTTTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: HLKSSCFQRELDPVTQIHPFLPW*NIVLDS
Trigger: GCTGTCCAAAACAATATTCCACCAAGGGAGGAATGG...GTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
3UTR CAA 72 bp TTTCTTGGACTTGTCCCACAAGGTAGACTGATACTTTaGTTCAGCAACGGTGACAATAGAGGAGAACAGGCG +
Preference number: 4 (lower is better)
Translates to: FLGLVPQGRLIL*FSNGDNRGEQA
Trigger: CGCCTGTTCTCCTCTATTGTCACCGTTGCTGAACAAAAGTATCAGTCTACCTTGTGGGACAAGTCCAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CCA 90 bp GGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTGAAAAGAGCAGTACTTGGTGTTaGTGTAGTGGTTGTCATACT +
Preference number: 4 (lower is better)
Translates to: GVFIAQYQCQVGELPPEKSSTWC*CSGCHT
Trigger: AGTATGACAACCACTACACCAACACCAAGTACTGCT...CTTTTCAGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS GCA 90 bp TGGGTCAAGGCCCCACTGCCGCCTCGTATCGCCAGCCTCCAGTCCTaGCTCCACGACGCGCCCTTCCCCAAGGCTGGCCGGGTCTGGATG +
Preference number: 5 (lower is better)
Translates to: WVKAPLPPRIASLQS*LHDAPFPKAGRVWM
Trigger: CATCCAGACCCGGCCAGCCTTGGGGAAGGGCGCGTCGTGGAGGCAGGACTGGAGGCTGGCGATACGAGGCGGCAGTGGGGCCTTGACCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564781.1
CDS GCA 90 bp GCCAGAAGCCCTCCGCCCTCATGGTCCATTGGGTCAAGGCCCCACTaGCGCCTCGTATCGCCAGCCTCCAGTCCTGCCTCCACGACGCGC +
Preference number: 5 (lower is better)
Translates to: ARSPPPSWSIGSRPH*RLVSPASSPASTTR
Trigger: GCGCGTCGTGGAGGCAGGACTGGAGGCTGGCGATACGAGGCGGCAGTGGGGCCTTGACCCAATGGACCATGAGGGCGGAGGGCTTCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564781.1
CDS CCA 90 bp CGCCAGCCTCCAGTCCTGCCTCCACGACGCGCCCTTCCCCAAGGCTaGCCGGGTCTGGATGTCGCCATCCCCTATTCGGAGCTACAGACC +
Preference number: 5 (lower is better)
Translates to: RQPPVLPPRRALPQG*PGLDVAIPYSELQT
Trigger: GGTCTGTAGCTCCGAATAGGGGATGGCGACATCCAGACCCGGCCAGCCTTGGGGAAGGGCGCGTCGTGGAGGCAGGACTGGAGGCTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564781.1
CDS CCA 90 bp AACCAGGTAACCAATCGCCAGAAGCCCTCCGCCCTCATGGTCCATTaGGTCAAGGCCCCACTGCCGCCTCGTATCGCCAGCCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: NQVTNRQKPSALMVH*VKAPLPPRIASLQS
Trigger: GGACTGGAGGCTGGCGATACGAGGCGGCAGTGGGGCCTTGACCCAATGGACCATGAGGGCGGAGGGCTTCTGGCGATTGGTTACCTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564781.1
CDS CCA 90 bp GTGGTCACTGGGGCTTGTACCAGCCGACAGATGTGCCCCACAGAGTaGCTACTAGGCATTTGTAGGGAGGGCTGGATGGGAGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: VVTGACTSRQMCPTE*LLGICREGWMGGPR
Trigger: CCTGGGCCCTCCCATCCAGCCCTCCCTACAAATGCCTAGTAGCCACTCTGTGGGGCACATCTGTCGGCTGGTACAAGCCCCAGTGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576994.5
CDS-3UTR CAA 90 bp AGCAGCCAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTGGGGCCCCCAGGGTCTaGGTCAGGAGCCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: SSQPWVRVGGVFIAQYQCGAPRV*VRSLPL
Trigger: AAGAGGGAGGCTCCTGACCAAGACCCTGGGGGCCCC...ACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTGGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS TCA 90 bp CACTGGCCTGGCACAGGGCATGAGTTGGGAAATCCCAGGGGATGGTaGGCCTCAGGAGGGCATGCAGCAATGGAGTCTCTCACCATCTGG +
Preference number: 5 (lower is better)
Translates to: HWPGTGHELGNPRGW*ASGGHAAMESLTIW
Trigger: CCAGATGGTGAGAGACTCCATTGCTGCATGCCCTCCTGAGGCTCACCATCCCCTGGGATTTCCCAACTCATGCCCTGTGCCAGGCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564975.5
CDS CCA 90 bp CAGATGTGCCCCACAGAGTGGCTACTAGGCATTTGTAGGGAGGGCTaGATGGGAGGGCCCAGGCAGGATTCCTCTCTATCTCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: QMCPTEWLLGICREG*MGGPRQDSSLSLPC
Trigger: GCAGGGCAGAGATAGAGAGGAATCCTGCCTGGGCCCTCCCATCCAGCCCTCCCTACAAATGCCTAGTAGCCACTCTGTGGGGCACATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576994.5
CDS-3UTR CAA 90 bp GCCCCTGGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCGGCAGGATGCGAATCTaGCAGGTCACAGGTCTGCGT +
Preference number: 5 (lower is better)
Translates to: APGPCSRLMAPARTSNFCGRMRI*QVTGLR
Trigger: ACGCAGACCTGTGACCTGCAAGATTCGCATCCTGCC...GCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACCAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp ACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGGCCTCCCTCTTTCGCTaGTGCAAGGAAGGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: TASGSCCGIHSHLSTRPMASLFR*CKEGLS
Trigger: GGAGAGCCCTTCCTTGCACAAGCGAAAGAGGGAGGC...CATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp ACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTGGGGCCCCCAGGGTCTaGGTCAGGAGCCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: TSKLFNGIWFMLWHPQPPGAPRV*VRSLPL
Trigger: AAGAGGGAGGCTCCTGACCAAGACCCTGGGGGCCCC...AGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS GCA 90 bp TCTTGCCCTCCTGTGGTCACTGGGGCTTGTACCAGCCGACAGATGTaGCCCACAGAGTGGCTACTAGGCATTTGTAGGGAGGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: SCPPVVTGACTSRQM*PTEWLLGICREGWM
Trigger: CATCCAGCCCTCCCTACAAATGCCTAGTAGCCACTCTGTGGGGCACATCTGTCGGCTGGTACAAGCCCCAGTGACCACAGGAGGGCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576994.5
CDS-3UTR CAA 90 bp TCTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGGAGGGGAGAGGCTGCCGTGGCTaGTCGAAAGTCCTCTATGTC +
Preference number: 5 (lower is better)
Translates to: SGSCCGIHSHLSTRPMEGRGCRG*SKVLYV
Trigger: GACATAGAGGACTTTCGACAAGCCACGGCAGCCTCT...CCCCTCCATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp CCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGGGGGCCCCCAGGGTCTaGGTCAGGAGCCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: PVFKENLTLSLRSTKGARGAPRV*VRSLPL
Trigger: AAGAGGGAGGCTCCTGACCAAGACCCTGGGGGCCCC...CCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp GCTGCCGTGGCTTGTCGAAAGTCCTCTATGTCCGAATACTGTTGGATGTGGTCAGGGGCCCCCAGGGTCTaGGTCAGGAGCCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: AAVACRKSSMSEYCWMWSGAPRV*VRSLPL
Trigger: AAGAGGGAGGCTCCTGACCAAGACCCTGGGGGCCCC...TGACCACATCCAACAGTATTCGGACATAGAGGACTTTCGACAAGCCACGGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS GCA 90 bp AGCAGGGCAGCTCCCATTCCTCCCATCTGGAAGACCACCCTGTTCTaGTCTCTTTCACAGGTGCGGAAGACAACTCGATCATCAGGGGCG +
Preference number: 5 (lower is better)
Translates to: SRAAPIPPIWKTTLF*SLSQVRKTTRSSGA
Trigger: CGCCCCTGATGATCGAGTTGTCTTCCGCACCTGTGAAAGAGAGCAGAACAGGGTGGTCTTCCAGATGGGAGGAATGGGAGCTGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432752.5
CDS-3UTR CAA 90 bp AAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCCGTCTGCTCTGAAGTCTaGGCTGAGAGCCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: KENLTLSLRSTKGARIHPVCSEV*AESLAC
Trigger: GCAGGCCAGGCTCTCAGCCAAGACTTCAGAGCAGAC...GGGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp GCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCGTCTGCTCTGAAGTCTaGGCTGAGAGCCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: ARQDQQTVQRHLVHAVASVCSEV*AESLAC
Trigger: GCAGGCCAGGCTCTCAGCCAAGACTTCAGAGCAGAC...GGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS TCA 90 bp TGTACAATGTACCCCAGGTATTCAACACTGGCCTGGCACAGGGCATaGGTTGGGAAATCCCAGGGGATGGTGAGCCTCAGGAGGGCATGC +
Preference number: 5 (lower is better)
Translates to: CTMYPRYSTLAWHRA*VGKSQGMVSLRRAC
Trigger: GCATGCCCTCCTGAGGCTCACCATCCCCTGGGATTTCCCAACTCATGCCCTGTGCCAGGCCAGTGTTGAATACCTGGGGTACATTGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564975.5
CDS TCA 90 bp GTGGAAAAGGTACTCTGGGCTGGGCAAGAGAGTAGCCGAGGGGTCTaGGCAAGTGTATCAAGGAGAGCTGTGGAAGCTGAGCACCGACTG +
Preference number: 5 (lower is better)
Translates to: VEKVLWAGQESSRGV*ASVSRRAVEAEHRL
Trigger: CAGTCGGTGCTCAGCTTCCACAGCTCTCCTTGATACACTTGCTCAGACCCCTCGGCTACTCTCTTGCCCAGCCCAGAGTACCTTTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571081.6
CDS CCA 90 bp AATGTACCCCAGGTATTCAACACTGGCCTGGCACAGGGCATGAGTTaGGAAATCCCAGGGGATGGTGAGCCTCAGGAGGGCATGCAGCAA +
Preference number: 5 (lower is better)
Translates to: NVPQVFNTGLAQGMS*EIPGDGEPQEGMQQ
Trigger: TTGCTGCATGCCCTCCTGAGGCTCACCATCCCCTGGGATTTCCCAACTCATGCCCTGTGCCAGGCCAGTGTTGAATACCTGGGGTACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564975.5
CDS-3UTR CAA 90 bp CCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCAGGGCCAGCAGCCTCATaGGAAGAGTCCCTACCCGAA +
Preference number: 5 (lower is better)
Translates to: PGKTSKLFNGIWFMLWHPGPAAS*EESLPE
Trigger: TTCGGGTAGGGACTCTTCCAATGAGGCTGCTGGCCC...TGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp CAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCGGCCGCAGACCCTCCTaGAGGAAGATAGATGGGTTC +
Preference number: 5 (lower is better)
Translates to: QRELDPVTQIHQRGQDPPGRRPS*RKIDGF
Trigger: GAACCCATCTATCTTCCTCAAGGAGGGTCTGCGGCC...GGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp GGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGGTCTGCTCTGAAGTCTaGGCTGAGAGCCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: GKTSKLFNGIWFMLWHPQVCSEV*AESLAC
Trigger: GCAGGCCAGGCTCTCAGCCAAGACTTCAGAGCAGAC...CTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS TCA 90 bp AGCGCAGCAGAGCCCTTAGCTGCACATGACTATGGAGCCTCCTGCTaGCATCTGGATAGGCCAGGTCCCCAAAATGAGGAGTCACCAGAT +
Preference number: 5 (lower is better)
Translates to: SAAEPLAAHDYGASC*HLDRPGPQNEESPD
Trigger: ATCTGGTGACTCCTCATTTTGGGGACCTGGCCTATCCAGATGTCAGCAGGAGGCTCCATAGTCATGTGCAGCTAAGGGCTCTGCTGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565980.1
CDS CCA 90 bp TGGGAAATCCCAGGGGATGGTGAGCCTCAGGAGGGCATGCAGCAATaGAGTCTCTCACCATCTGGAAGACCACCCTGTTCTGCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: WEIPGDGEPQEGMQQ*SLSPSGRPPCSALF
Trigger: AAAGAGAGCAGAACAGGGTGGTCTTCCAGATGGTGAGAGACTCCATTGCTGCATGCCCTCCTGAGGCTCACCATCCCCTGGGATTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564975.5
CDS-3UTR CAA 90 bp ACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTTAGCACCAGGCCCATGAGGATCTTCTCAATCTaGTCAGGGTCTGACAGCAGG +
Preference number: 5 (lower is better)
Translates to: TASGSCCGIHSHLSTRPMRIFSI*SGSDSR
Trigger: CCTGCTGTCAGACCCTGACAAGATTGAGAAGATCCT...CATGGGCCTGGTGCTAAGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp CTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGGGCAGGATGCGAATCTaGCAGGTCACAGGTCTGCGT +
Preference number: 5 (lower is better)
Translates to: LLPGKTSKLFNGIWFMLWGRMRI*QVTGLR
Trigger: ACGCAGACCTGTGACCTGCAAGATTCGCATCCTGCC...CCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp CCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCAGGCCGCAGACCCTCCTaGAGGAAGATAGATGGGTTC +
Preference number: 5 (lower is better)
Translates to: PGKTSKLFNGIWFMLWHPGRRPS*RKIDGF
Trigger: GAACCCATCTATCTTCCTCAAGGAGGGTCTGCGGCC...TGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp GTATCTTCTAGCGATGGCAGGATGCGAATCTTGCAGGTCACAGGTCTGCGTGTCGGCCGCAGACCCTCCTaGAGGAAGATAGATGGGTTC +
Preference number: 5 (lower is better)
Translates to: VSSSDGRMRILQVTGLRVGRRPS*RKIDGF
Trigger: GAACCCATCTATCTTCCTCAAGGAGGGTCTGCGGCC...GACACGCAGACCTGTGACCTGCAAGATTCGCATCCTGCCATCGCTAGAAGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS GCA 90 bp AAGTCCCCATCTGGAAGACCACCCTGTTCTGCTCTCTTTCACAGGTaGGGAAGACAACTCGATCATCAGGGGCGACAAAGTCCACTGTGC +
Preference number: 5 (lower is better)
Translates to: KSPSGRPPCSALFHR*GRQLDHQGRQSPLC
Trigger: GCACAGTGGACTTTGTCGCCCCTGATGATCGAGTTGTCTTCCGCACCTGTGAAAGAGAGCAGAACAGGGTGGTCTTCCAGATGGGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000562246.2
ENST00000565263.6
ENST00000566306.5
ENST00000568099.6
ENST00000570709.6
ENST00000575677.5
CDS GCA 90 bp TTCCTCCCATCTGGAAGACCACCCTGTTCTGCTCTCTTTCACAGGTaGGGAAGACAACTCGATCATCAGGGGCGACAAAGTCCACTGTGC +
Preference number: 5 (lower is better)
Translates to: FLPSGRPPCSALFHR*GRQLDHQGRQSPLC
Trigger: GCACAGTGGACTTTGTCGCCCCTGATGATCGAGTTGTCTTCCGCACCTGTGAAAGAGAGCAGAACAGGGTGGTCTTCCAGATGGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432752.5
CDS GCA 90 bp CTCTCACCATCTGGAAGACCACCCTGTTCTGCTCTCTTTCACAGGTaGGGAAGACAACTCGATCATCAGGGGCGACAAAGTCCACTGTGC +
Preference number: 5 (lower is better)
Translates to: LSPSGRPPCSALFHR*GRQLDHQGRQSPLC
Trigger: GCACAGTGGACTTTGTCGCCCCTGATGATCGAGTTGTCTTCCGCACCTGTGAAAGAGAGCAGAACAGGGTGGTCTTCCAGATGGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564975.5
CDS GCA 90 bp CATGCAGCAATGGAGTCTCTCACCATCTGGAAGACCACCCTGTTCTaGTCTCTTTCACAGGTGCGGAAGACAACTCGATCATCAGGGGCG +
Preference number: 5 (lower is better)
Translates to: HAAMESLTIWKTTLF*SLSQVRKTTRSSGA
Trigger: CGCCCCTGATGATCGAGTTGTCTTCCGCACCTGTGAAAGAGAGCAGAACAGGGTGGTCTTCCAGATGGTGAGAGACTCCATTGCTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564975.5
CDS-3UTR CAA 90 bp CCTCATAGAAGGCACCAAGGCCAAAGGCCTCACAAATTTCCCGGGAAGACTGGGTCCCTACCCGAACCATaGGGGCCAGGATTAGCTTAT +
Preference number: 5 (lower is better)
Translates to: PHRRHQGQRPHKFPGKTGSLPEP*GPGLAY
Trigger: ATAAGCTAATCCTGGCCCCAATGGTTCGGGTAGGGA...CCCAGTCTTCCCGGGAAATTTGTGAGGCCTTTGGCCTTGGTGCCTTCTATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CAA 90 bp AGCAGCCAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTTCCCTACCCGAACCATaGGGGCCAGGATTAGCTTAT +
Preference number: 5 (lower is better)
Translates to: SSQPWVRVGGVFIAQYQCSLPEP*GPGLAY
Trigger: ATAAGCTAATCCTGGCCCCAATGGTTCGGGTAGGGA...ACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTGGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CAA 90 bp GGTCCATGCTCTAGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAGCTCCCATTCCTCCCTaGGTGGAATATTGTTTTGGA +
Preference number: 5 (lower is better)
Translates to: GPCSRLMAPARTSNFCQAAPIPP*VEYCFG
Trigger: TCCAAAACAATATTCCACCAAGGGAGGAATGGGAGC...TGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCTAGAGCATGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp CCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCAAGAGGCTGCCGTGGCTaGTCGAAAGTCCTCTATGTC +
Preference number: 5 (lower is better)
Translates to: PGKTSKLFNGIWFMLWHPRGCRG*SKVLYV
Trigger: GACATAGAGGACTTTCGACAAGCCACGGCAGCCTCT...TGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp GTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTGCCTCCCTCTTTCGCTaGTGCAAGGAAGGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: VGGVFIAQYQCQVGELPPASLFR*CKEGLS
Trigger: GGAGAGCCCTTCCTTGCACAAGCGAAAGAGGGAGGC...AGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS CCA 90 bp CAGCTCATATCAGAATTTAGGTTTCTCTTGCCCTCCTGTGGTCACTaGGGCTTGTACCAGCCGACAGATGTGCCCCACAGAGTGGCTACT +
Preference number: 5 (lower is better)
Translates to: QLISEFRFLLPSCGH*GLYQPTDVPHRVAT
Trigger: AGTAGCCACTCTGTGGGGCACATCTGTCGGCTGGTACAAGCCCCAGTGACCACAGGAGGGCAAGAGAAACCTAAATTCTGATATGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576994.5
CDS-3UTR CAA 90 bp GGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGTCCCTACCCGAACCATaGGGGCCAGGATTAGCTTAT +
Preference number: 5 (lower is better)
Translates to: GKTSKLFNGIWFMLWHPQSLPEP*GPGLAY
Trigger: ATAAGCTAATCCTGGCCCCAATGGTTCGGGTAGGGA...CTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp GTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTGGCAGGATGCGAATCTaGCAGGTCACAGGTCTGCGT +
Preference number: 5 (lower is better)
Translates to: VGGVFIAQYQCQVGELPPGRMRI*QVTGLR
Trigger: ACGCAGACCTGTGACCTGCAAGATTCGCATCCTGCC...AGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CAA 90 bp CCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGAGAGGCTGCCGTGGCTaGTCGAAAGTCCTCTATGTC +
Preference number: 5 (lower is better)
Translates to: PVFKENLTLSLRSTKGARRGCRG*SKVLYV
Trigger: GACATAGAGGACTTTCGACAAGCCACGGCAGCCTCT...CCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp GTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTGGCCGCAGACCCTCCTaGAGGAAGATAGATGGGTTC +
Preference number: 5 (lower is better)
Translates to: VGGVFIAQYQCQVGELPPGRRPS*RKIDGF
Trigger: GAACCCATCTATCTTCCTCAAGGAGGGTCTGCGGCC...AGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CAA 90 bp AGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACGCTCTCCGGTCAAACTaGACAGCCATCTTAATGACA +
Preference number: 5 (lower is better)
Translates to: RLMAPARTSNFCQARPANALRSN*TAILMT
Trigger: TGTCATTAAGATGGCTGTCAAGTTTGACCGGAGAGC...GTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp GGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGTGCTCCGCCAGTTTCTaGGACTTGTCCCACAAGGTA +
Preference number: 5 (lower is better)
Translates to: GKTSKLFNGIWFMLWHPQCSASF*DLSHKV
Trigger: TACCTTGTGGGACAAGTCCAAGAAACTGGCGGAGCA...CTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp CTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGTGCTCCGCCAGTTTCTaGGACTTGTCCCACAAGGTA +
Preference number: 5 (lower is better)
Translates to: LLPGKTSKLFNGIWFMLWCSASF*DLSHKV
Trigger: TACCTTGTGGGACAAGTCCAAGAAACTGGCGGAGCA...CCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS TCA 90 bp GCTGCAACCTCGGATACCAGCACGGGACAAGCTATCTCAGGGCAATaGGGAACAACTAAAGAGAATCCCAGGAACCAGGTAACCAATCGC +
Preference number: 5 (lower is better)
Translates to: AATSDTSTGQAISGQ*GTTKENPRNQVTNR
Trigger: GCGATTGGTTACCTGGTTCCTGGGATTCTCTTTAGTTGTTCCTCATTGCCCTGAGATAGCTTGTCCCGTGCTGGTATCCGAGGTTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564781.1
CDS-3UTR CAA 90 bp AGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACATCCCTACCCGAACCATaGGGGCCAGGATTAGCTTAT +
Preference number: 5 (lower is better)
Translates to: RQDQQTVQRHLVHAVASTSLPEP*GPGLAY
Trigger: ATAAGCTAATCCTGGCCCCAATGGTTCGGGTAGGGA...TGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp AAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCCTTTGGACAGCCCATGTaGACATCAATACCAGCCACA +
Preference number: 5 (lower is better)
Translates to: KENLTLSLRSTKGARIHPFGQPM*TSIPAT
Trigger: TGTGGCTGGTATTGATGTCAACATGGGCTGTCCAAA...GGGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp AGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACTCCCTTGGTGGAATATaGTTTTGGACAGCCCATGTT +
Preference number: 5 (lower is better)
Translates to: RLMAPARTSNFCQARPANSLGGI*FWTAHV
Trigger: AACATGGGCTGTCCAAAACAATATTCCACCAAGGGA...GTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp CAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCGCTCCCATTCCTCCCTaGGTGGAATATTGTTTTGGA +
Preference number: 5 (lower is better)
Translates to: QRELDPVTQIHQRGQDPPAPIPP*VEYCFG
Trigger: TCCAAAACAATATTCCACCAAGGGAGGAATGGGAGC...GGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp CAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTAGGATCTTCTCAATCTaGTCAGGGTCTGACAGCAGG +
Preference number: 5 (lower is better)
Translates to: QPWVRVGGVFIAQYQCQVRIFSI*SGSDSR
Trigger: CCTGCTGTCAGACCCTGACAAGATTGAGAAGATCCT...AACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CAA 90 bp GGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTTGCTCCGCCAGTTTCTaGGACTTGTCCCACAAGGTA +
Preference number: 5 (lower is better)
Translates to: GEGRGCLYCTVPMSGWGVCSASF*DLSHKV
Trigger: TACCTTGTGGGACAAGTCCAAGAAACTGGCGGAGCA...AACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CAA 90 bp GGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTGAAAAGGCCTCCCTCTTTCGCTaGTGCAAGGAAGGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: GVFIAQYQCQVGELPPEKASLFR*CKEGLS
Trigger: GGAGAGCCCTTCCTTGCACAAGCGAAAGAGGGAGGC...CTTTTCAGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CAA 90 bp AGGCTGATGGCCCCTGCCAGGACATCTAACTTCTGCCAGGCAAGACCAGCAAACGTTTTCAAAGAGAACTaGACCCTGTCACTCAGATCC +
Preference number: 5 (lower is better)
Translates to: RLMAPARTSNFCQARPANVFKEN*TLSLRS
Trigger: GGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAAC...GTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGTCCTGGCAGGGGCCATCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS TCA 90 bp TCTGTTACAGCCAGTCCTTCAAGTCCAGCTCGAAGGAGCCTTCCATaGTCCCTTTGTCCATCCCAATCTCTGCCTCTCCTGCTGTTGATT +
Preference number: 5 (lower is better)
Translates to: SVTASPSSPARRSLP*SLCPSQSLPLLLLI
Trigger: AATCAACAGCAGGAGAGGCAGAGATTGGGATGGACAAAGGGATCATGGAAGGCTCCTTCGAGCTGGACTTGAAGGACTGGCTGTAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576994.5
CDS GCA 90 bp TCTTTGTTTGATATCCTGCGCAGGGAACACATCTGGGAAAACAGCTaGAACCTCGGATACCAGCACGGGACAAGCTATCTCAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: SLFDILRREHIWENS*NLGYQHGTSYLRAM
Trigger: CATTGCCCTGAGATAGCTTGTCCCGTGCTGGTATCCGAGGTTGCAGCTGTTTTCCCAGATGTGTTCCCTGCGCAGGATATCAAACAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564781.1
CDS-3UTR CAA 90 bp ACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTTTTGGACAGCCCATGTaGACATCAATACCAGCCACA +
Preference number: 5 (lower is better)
Translates to: TSKLFNGIWFMLWHPQPPFGQPM*TSIPAT
Trigger: TGTGGCTGGTATTGATGTCAACATGGGCTGTCCAAA...AGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp GGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTGAAAAGGGCAGGATGCGAATCTaGCAGGTCACAGGTCTGCGT +
Preference number: 5 (lower is better)
Translates to: GVFIAQYQCQVGELPPEKGRMRI*QVTGLR
Trigger: ACGCAGACCTGTGACCTGCAAGATTCGCATCCTGCC...CTTTTCAGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CAA 90 bp TACCACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCGTCTGCTCTGAAGTCTaGGCTGAGAGCCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: YHLKSSCFQRELDPVTQIVCSEV*AESLAC
Trigger: GCAGGCCAGGCTCTCAGCCAAGACTTCAGAGCAGAC...GATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp ATGCCAGTCCTCTCTATCCGCTTCACAAGGCTCAGGGTATCTTCTAGCGATGGCGCTCTCCGGTCAAACTaGACAGCCATCTTAATGACA +
Preference number: 5 (lower is better)
Translates to: MPVLSIRFTRLRVSSSDGALRSN*TAILMT
Trigger: TGTCATTAAGATGGCTGTCAAGTTTGACCGGAGAGC...GCCATCGCTAGAAGATACCCTGAGCCTTGTGAAGCGGATAGAGAGGACTGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CAA 90 bp GCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCGCTCTCCGGTCAAACTaGACAGCCATCTTAATGACA +
Preference number: 5 (lower is better)
Translates to: ARPANCSTASGSCCGIHSALRSN*TAILMT
Trigger: TGTCATTAAGATGGCTGTCAAGTTTGACCGGAGAGC...GCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp CATTCCTCCCTTGGTGGAATATTGTTTTGGACAGCCCATGTTGACATCAATACCGCCTCCCTCTTTCGCTaGTGCAAGGAAGGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: HSSLGGILFWTAHVDINTASLFR*CKEGLS
Trigger: GGAGAGCCCTTCCTTGCACAAGCGAAAGAGGGAGGC...GGTATTGATGTCAACATGGGCTGTCCAAAACAATATTCCACCAAGGGAGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CAA 90 bp AAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCCGTTTTCAAAGAGAACTaGACCCTGTCACTCAGATCC +
Preference number: 5 (lower is better)
Translates to: KENLTLSLRSTKGARIHPVFKEN*TLSLRS
Trigger: GGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAAC...GGGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp CAGCCGTGGGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTAGTACCAATGTCAGGTaGGGGAGTTACCACCTGAAA +
Preference number: 5 (lower is better)
Translates to: QPWVRVGGVFIAQYQCQVSTNVR*GSYHLK
Trigger: TTTCAGGTGGTAACTCCCCAACCTGACATTGGTACT...AACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACCCACGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CAA 90 bp ACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCCACCTAGTACCAATGTCAGGTaGGGGAGTTACCACCTGAAA +
Preference number: 5 (lower is better)
Translates to: TSKLFNGIWFMLWHPQPPSTNVR*GSYHLK
Trigger: TTTCAGGTGGTAACTCCCCAACCTGACATTGGTACT...AGGTGGCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CAA 90 bp CCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGTTTGGACAGCCCATGTaGACATCAATACCAGCCACA +
Preference number: 5 (lower is better)
Translates to: PVFKENLTLSLRSTKGARFGQPM*TSIPAT
Trigger: TGTGGCTGGTATTGATGTCAACATGGGCTGTCCAAA...CCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp CTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTAGGATCTTCTCAATCTaGTCAGGGTCTGACAGCAGG +
Preference number: 5 (lower is better)
Translates to: LTSARQDQQTVQRHLVHARIFSI*SGSDSR
Trigger: CCTGCTGTCAGACCCTGACAAGATTGAGAAGATCCT...AGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp CTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGGTATCAGCAATGGCTTaGATGACTTCACAGCTGACA +
Preference number: 5 (lower is better)
Translates to: LLPGKTSKLFNGIWFMLWVSAMA*MTSQLT
Trigger: TGTCAGCTGTGAAGTCATCAAAGCCATTGCTGATAC...CCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp TGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCTATGTCCGAATACTGTaGGATGTGGTCATGAGATCC +
Preference number: 5 (lower is better)
Translates to: CQARPANCSTASGSCCGIYVRIL*DVVMRS
Trigger: GGATCTCATGACCACATCCAACAGTATTCGGACATA...GATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp ACAGGTCTGCGTGTCCCTTTAACAAGAGTGCTGAGGATCTTCTCAATCTTGTCAAGAGGCTGCCGTGGCTaGTCGAAAGTCCTCTATGTC +
Preference number: 5 (lower is better)
Translates to: TGLRVPLTRVLRIFSILSRGCRG*SKVLYV
Trigger: GACATAGAGGACTTTCGACAAGCCACGGCAGCCTCT...TGACAAGATTGAGAAGATCCTCAGCACTCTTGTTAAAGGGACACGCAGACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CAA 90 bp GGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTGTATCAGCAATGGCTTaGATGACTTCACAGCTGACA +
Preference number: 5 (lower is better)
Translates to: GEGRGCLYCTVPMSGWGVVSAMA*MTSQLT
Trigger: TGTCAGCTGTGAAGTCATCAAAGCCATTGCTGATAC...AACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CAA 90 bp GGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTTATGTCCGAATACTGTaGGATGTGGTCATGAGATCC +
Preference number: 5 (lower is better)
Translates to: GEGRGCLYCTVPMSGWGVYVRIL*DVVMRS
Trigger: GGATCTCATGACCACATCCAACAGTATTCGGACATA...AACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CAA 90 bp TTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCAGCTCTCCGGTCAAACTaGACAGCCATCTTAATGACA +
Preference number: 5 (lower is better)
Translates to: FQRELDPVTQIHQRGQDPALRSN*TAILMT
Trigger: TGTCATTAAGATGGCTGTCAAGTTTGACCGGAGAGC...TGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp GGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGGGTAGACTGATACTTTaGTTCAGCAACGGTGACAAT +
Preference number: 5 (lower is better)
Translates to: GKTSKLFNGIWFMLWHPQGRLIL*FSNGDN
Trigger: ATTGTCACCGTTGCTGAACAAAAGTATCAGTCTACC...CTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp GCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGCGGTAGACTGATACTTTaGTTCAGCAACGGTGACAAT +
Preference number: 5 (lower is better)
Translates to: ARPANCSTASGSCCGIHSGRLIL*FSNGDN
Trigger: ATTGTCACCGTTGCTGAACAAAAGTATCAGTCTACC...GCTGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp CACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACTGCTCCGCCAGTTTCTaGGACTTGTCCCACAAGGTA +
Preference number: 5 (lower is better)
Translates to: HLKSSCFQRELDPVTQIHCSASF*DLSHKV
Trigger: TACCTTGTGGGACAAGTCCAAGAAACTGGCGGAGCA...GTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp TTTCAAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCAAGTACCAATGTCAGGTaGGGGAGTTACCACCTGAAA +
Preference number: 5 (lower is better)
Translates to: FQRELDPVTQIHQRGQDPSTNVR*GSYHLK
Trigger: TTTCAGGTGGTAACTCCCCAACCTGACATTGGTACT...TGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CAA 90 bp AAAGAGAACTTGACCCTGTCACTCAGATCCACCAAAGGGGCCAGGATCCACCCCGTACAGAGTAATTCTTaGTTTGATATCTCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: KENLTLSLRSTKGARIHPVQSNS*FDISQL
Trigger: CAGCTGCGAGATATCAAACAAAGAATTACTCTGTAC...GGGGTGGATCCTGGCCCCTTTGGTGGATCTGAGTGACAGGGTCAAGTTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432752.5
ENST00000565263.6
CDS TCA 90 bp CTCCCATTCCTCCCTTGGTGGAATATTGTTTTGGACAGCCCATGTTaGCATCAATACCAGCCACATCATTTTCTACAAGCCTGGCCACAG +
Preference number: 5 (lower is better)
Translates to: LPFLPWWNIVLDSPC*HQYQPHHFLQAWPQ
Trigger: CTGTGGCCAGGCTTGTAGAAAATGATGTGGCTGGTATTGATGTCAACATGGGCTGTCCAAAACAATATTCCACCAAGGGAGGAATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000562246.2
ENST00000565263.6
ENST00000575677.5
CDS TCA 90 bp TTCCATGATCCCTTTGTCCATCCCAATCTCTGCCTCTCCTGCTGTTaGTTGCTTAGCACCAGTGCGTGGCTACCTATCTATCTCTTAGAT +
Preference number: 5 (lower is better)
Translates to: FHDPFVHPNLCLSCC*LLSTSAWLPIYLLD
Trigger: ATCTAAGAGATAGATAGGTAGCCACGCACTGGTGCTAAGCAATCAACAGCAGGAGAGGCAGAGATTGGGATGGACAAAGGGATCATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576994.5
CDS TCA 90 bp TTGTTTGATATCAGTCCTTCAAGTCCAGCTCGAAGGAGCCTTCCATaGTCCCTTTGTCCATCCCAATCTCTGCCTCTCCTGCTGTTGATT +
Preference number: 5 (lower is better)
Translates to: LFDISPSSPARRSLP*SLCPSQSLPLLLLI
Trigger: AATCAACAGCAGGAGAGGCAGAGATTGGGATGGACAAAGGGATCATGGAAGGCTCCTTCGAGCTGGACTTGAAGGACTGATATCAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566306.5
CDS-3UTR CAA 90 bp TGGTTGTCATACTGCACCGCGTATCTGATGTATTTCTGCATGACCTCCTCCAGGTCCCTTGGTGGAATATaGTTTTGGACAGCCCATGTT +
Preference number: 5 (lower is better)
Translates to: WLSYCTAYLMYFCMTSSRSLGGI*FWTAHV
Trigger: AACATGGGCTGTCCAAAACAATATTCCACCAAGGGA...CCTGGAGGAGGTCATGCAGAAATACATCAGATACGCGGTGCAGTATGACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CAA 90 bp AGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTGGCATCCACAGGTAGACTGATACTTTaGTTCAGCAACGGTGACAAT +
Preference number: 5 (lower is better)
Translates to: RQDQQTVQRHLVHAVASTGRLIL*FSNGDN
Trigger: ATTGTCACCGTTGCTGAACAAAAGTATCAGTCTACC...TGTGGATGCCACAGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp GGTGAGGGTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTGGTAGACTGATACTTTaGTTCAGCAACGGTGACAAT +
Preference number: 5 (lower is better)
Translates to: GEGRGCLYCTVPMSGWGVGRLIL*FSNGDN
Trigger: ATTGTCACCGTTGCTGAACAAAAGTATCAGTCTACC...AACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTACCCTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CAA 90 bp CTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATGCTGTTTTCAAAGAGAACTaGACCCTGTCACTCAGATCC +
Preference number: 5 (lower is better)
Translates to: LTSARQDQQTVQRHLVHAVFKEN*TLSLRS
Trigger: GGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAAC...AGCATGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp ACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCAGTATCAGCAATGGCTTaGATGACTTCACAGCTGACA +
Preference number: 5 (lower is better)
Translates to: TSNFCQARPANCSTASGSVSAMA*MTSQLT
Trigger: TGTCAGCTGTGAAGTCATCAAAGCCATTGCTGATAC...TGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp GTTCTCGTAGCATCTGGCACAAGCAGTACTTGGTGTTGGTGTAGTGGTTGTCATTATGTCCGAATACTGTaGGATGTGGTCATGAGATCC +
Preference number: 5 (lower is better)
Translates to: VLVASGTSSTWCWCSGCHYVRIL*DVVMRS
Trigger: GGATCTCATGACCACATCCAACAGTATTCGGACATA...ATGACAACCACTACACCAACACCAAGTACTGCTTGTGCCAGATGCTACGAGAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CAA 90 bp ACATCTAACTTCTGCCAGGCAAGACCAGCAAACTGTTCAACGGCATCTGGTTCATATGTCCGAATACTGTaGGATGTGGTCATGAGATCC +
Preference number: 5 (lower is better)
Translates to: TSNFCQARPANCSTASGSYVRIL*DVVMRS
Trigger: GGATCTCATGACCACATCCAACAGTATTCGGACATA...TGAACCAGATGCCGTTGAACAGTTTGCTGGTCTTGCCTGGCAGAAGTTAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp TACCACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCGCTCCCATTCCTCCCTaGGTGGAATATTGTTTTGGA +
Preference number: 5 (lower is better)
Translates to: YHLKSSCFQRELDPVTQIAPIPP*VEYCFG
Trigger: TCCAAAACAATATTCCACCAAGGGAGGAATGGGAGC...GATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS-3UTR CAA 90 bp ATTCCTCCCTTGGTGGAATATTGTTTTGGACAGCCCATGTTGACATCAATACCAAGGATCTTCTCAATCTaGTCAGGGTCTGACAGCAGG +
Preference number: 5 (lower is better)
Translates to: IPPLVEYCFGQPMLTSIPRIFSI*SGSDSR
Trigger: CCTGCTGTCAGACCCTGACAAGATTGAGAAGATCCT...TGGTATTGATGTCAACATGGGCTGTCCAAAACAATATTCCACCAAGGGAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561965.1
CDS-3UTR CAA 90 bp GGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTGAAAAGGTTTTCAAAGAGAACTaGACCCTGTCACTCAGATCC +
Preference number: 5 (lower is better)
Translates to: GVFIAQYQCQVGELPPEKVFKEN*TLSLRS
Trigger: GGATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAAC...CTTTTCAGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000565263.6
CDS-3UTR CAA 90 bp GTAGGGGGTGTCTTTATTGCACAGTACCAATGTCAGGTTGGGGAGTTACCACCTGTACAGAGTAATTCTTaGTTTGATATCTCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: VGGVFIAQYQCQVGELPPVQSNS*FDISQL
Trigger: CAGCTGCGAGATATCAAACAAAGAATTACTCTGTAC...AGGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432752.5
ENST00000565263.6
CDS CCA 90 bp TGTTACAGCCCAGTAAAGGACTACAAGCCCTTTGGCCAACTTGCATaGAGCCATCACTTGAGTGAACAAGATTCACATAAGAAAGCAACA +
Preference number: 5 (lower is better)
Translates to: CYSPVKDYKPFGQLA*SHHLSEQDSHKKAT
Trigger: TGTTGCTTTCTTATGTGAATCTTGTTCACTCAAGTGATGGCTCCATGCAAGTTGGCCAAAGGGCTTGTAGTCCTTTACTGGGCTGTAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569289.5
CDS-3UTR CAA 90 bp TACCACCTGAAAAGCTCCTGTTTTCAAAGAGAACTTGACCCTGTCACTCAGATCTCCCTTGGTGGAATATaGTTTTGGACAGCCCATGTT +
Preference number: 5 (lower is better)
Translates to: YHLKSSCFQRELDPVTQISLGGI*FWTAHV
Trigger: AACATGGGCTGTCCAAAACAATATTCCACCAAGGGA...GATCTGAGTGACAGGGTCAAGTTCTCTTTGAAAACAGGAGCTTTTCAGGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000565263.6
CDS GCA 72 bp CCTCCGCCCTCATGGTCCATTGGGTCAAGGCCCCACTaGCGCCTCGTATCGCCAGCCTCCAGTCCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: PPPSWSIGSRPH*RLVSPASSPAS
Trigger: GGAGGCAGGACTGGAGGCTGGCGATACGAGGCGGCAGTGGGGCCTTGACCCAATGGACCATGAGGGCGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564781.1
CDS CCA 72 bp CCAGTCCTGCCTCCACGACGCGCCCTTCCCCAAGGCTaGCCGGGTCTGGATGTCGCCATCCCCTATTCGGAG +
Preference number: 6 (lower is better)
Translates to: PVLPPRRALPQG*PGLDVAIPYSE
Trigger: CTCCGAATAGGGGATGGCGACATCCAGACCCGGCCAGCCTTGGGGAAGGGCGCGTCGTGGAGGCAGGACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564781.1
CDS CCA 72 bp CTCCACGACGCGCCCTTCCCCAAGGCTGGCCGGGTCTaGATGTCGCCATCCCCTATTCGGAGCTACAGACCT +
Preference number: 6 (lower is better)
Translates to: LHDAPFPKAGRV*MSPSPIRSYRP
Trigger: AGGTCTGTAGCTCCGAATAGGGGATGGCGACATCCAGACCCGGCCAGCCTTGGGGAAGGGCGCGTCGTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564781.1
CDS CCA 72 bp ACCAATCGCCAGAAGCCCTCCGCCCTCATGGTCCATTaGGTCAAGGCCCCACTGCCGCCTCGTATCGCCAGC +
Preference number: 6 (lower is better)
Translates to: TNRQKPSALMVH*VKAPLPPRIAS
Trigger: GCTGGCGATACGAGGCGGCAGTGGGGCCTTGACCCAATGGACCATGAGGGCGGAGGGCTTCTGGCGATTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564781.1
CDS CCA 72 bp GGGAAGCCAGTGGAGCTGAGCGGGCTGCAAGAGGGGTaGGTTCTGGATGAGAAGTTGGGACGCGTGACGAGG +
Preference number: 6 (lower is better)
Translates to: GKPVELSGLQEG*VLDEKLGRVTR
Trigger: CCTCGTCACGCGTCCCAACTTCTCATCCAGAACCCACCCCTCTTGCAGCCCGCTCAGCTCCACTGGCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567100.5
CDS CAA 72 bp AACCAATCGCCAGAAGCCCTCCGCCCTCATGGTCCATaGGGTCAAGGCCCCACTGCCGCCTCGTATCGCCAG +
Preference number: 6 (lower is better)
Translates to: NQSPEALRPHGP*GQGPTAASYRQ
Trigger: CTGGCGATACGAGGCGGCAGTGGGGCCTTGACCCAATGGACCATGAGGGCGGAGGGCTTCTGGCGATTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564781.1
CDS CAA 90 bp GAACCAGGTAACCAATCGCCAGAAGCCCTCCGCCCTCATGGTCCATaGGGTCAAGGCCCCACTGCCGCCTCGTATCGCCAGCCTCCAGTC +
Preference number: 6 (lower is better)
Translates to: EPGNQSPEALRPHGP*GQGPTAASYRQPPV
Trigger: GACTGGAGGCTGGCGATACGAGGCGGCAGTGGGGCCTTGACCCAATGGACCATGAGGGCGGAGGGCTTCTGGCGATTGGTTACCTGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564781.1
CDS TCA 72 bp GGCACAGGGCATGAGTTGGGAAATCCCAGGGGATGGTaGGCCTCAGGAGGGCATGCAGCAATGGAGTCTCTC +
Preference number: 6 (lower is better)
Translates to: GTGHELGNPRGW*ASGGHAAMESL
Trigger: GAGAGACTCCATTGCTGCATGCCCTCCTGAGGCTCACCATCCCCTGGGATTTCCCAACTCATGCCCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564975.5
CDS CCA 72 bp CAGGTATTCAACACTGGCCTGGCACAGGGCATGAGTTaGGAAATCCCAGGGGATGGTGAGCCTCAGGAGGGC +
Preference number: 6 (lower is better)
Translates to: QVFNTGLAQGMS*EIPGDGEPQEG
Trigger: GCCCTCCTGAGGCTCACCATCCCCTGGGATTTCCCAACTCATGCCCTGTGCCAGGCCAGTGTTGAATACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564975.5
CDS CCA 72 bp GGGGCTTGTACCAGCCGACAGATGTGCCCCACAGAGTaGCTACTAGGCATTTGTAGGGAGGGCTGGATGGGA +
Preference number: 6 (lower is better)
Translates to: GACTSRQMCPTE*LLGICREGWMG
Trigger: TCCCATCCAGCCCTCCCTACAAATGCCTAGTAGCCACTCTGTGGGGCACATCTGTCGGCTGGTACAAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576994.5
CDS TCA 72 bp TACCCCAGGTATTCAACACTGGCCTGGCACAGGGCATaGGTTGGGAAATCCCAGGGGATGGTGAGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: YPRYSTLAWHRA*VGKSQGMVSLR
Trigger: CCTGAGGCTCACCATCCCCTGGGATTTCCCAACTCATGCCCTGTGCCAGGCCAGTGTTGAATACCTGGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564975.5
CDS GCA 72 bp GGGAAATCCCAGGGGATGGTGAGCCTCAGGAGGGCATaGAGCAATGGAGTCTCTCACCATCTGGAAGACCAC +
Preference number: 6 (lower is better)
Translates to: GKSQGMVSLRRA*SNGVSHHLEDH
Trigger: GTGGTCTTCCAGATGGTGAGAGACTCCATTGCTGCATGCCCTCCTGAGGCTCACCATCCCCTGGGATTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564975.5
CDS GCA 72 bp CCTGTGGTCACTGGGGCTTGTACCAGCCGACAGATGTaGCCCACAGAGTGGCTACTAGGCATTTGTAGGGAG +
Preference number: 6 (lower is better)
Translates to: PVVTGACTSRQM*PTEWLLGICRE
Trigger: CTCCCTACAAATGCCTAGTAGCCACTCTGTGGGGCACATCTGTCGGCTGGTACAAGCCCCAGTGACCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576994.5
CDS CCA 72 bp CCAGGGGATGGTGAGCCTCAGGAGGGCATGCAGCAATaGAGTCTCTCACCATCTGGAAGACCACCCTGTTCT +
Preference number: 6 (lower is better)
Translates to: PGDGEPQEGMQQ*SLSPSGRPPCS
Trigger: AGAACAGGGTGGTCTTCCAGATGGTGAGAGACTCCATTGCTGCATGCCCTCCTGAGGCTCACCATCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564975.5
CDS CCA 72 bp CCCACAGAGTGGCTACTAGGCATTTGTAGGGAGGGCTaGATGGGAGGGCCCAGGCAGGATTCCTCTCTATCT +
Preference number: 6 (lower is better)
Translates to: PTEWLLGICREG*MGGPRQDSSLS
Trigger: AGATAGAGAGGAATCCTGCCTGGGCCCTCCCATCCAGCCCTCCCTACAAATGCCTAGTAGCCACTCTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576994.5
CDS GCA 72 bp GAGGCACATGGAAGGGTCTCAGGCTCTATGCTGAGGTaGTGGCTTGATCCTTCAGATACTGGGGAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: EAHGRVSGSMLR*WLDPSDTGELL
Trigger: CAGCAGCTCCCCAGTATCTGAAGGATCAAGCCAGCACCTCAGCATAGAGCCTGAGACCCTTCCATGTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565980.1
CDS CCA 72 bp AATGTCCGCTCCATAATCCAGGGCCAGCAGCCTCATTaGAAGAGTCCCTACCCGAACCATTGGGGCCAGGAT +
Preference number: 6 (lower is better)
Translates to: NVRSIIQGQQPH*KSPYPNHWGQD
Trigger: ATCCTGGCCCCAATGGTTCGGGTAGGGACTCTTCCAATGAGGCTGCTGGCCCTGGATTATGGAGCGGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000562246.2
ENST00000564781.1
ENST00000564975.5
ENST00000565263.6
ENST00000566306.5
ENST00000567100.5
ENST00000568099.6
ENST00000569289.5
ENST00000570709.6
ENST00000571081.6
ENST00000575677.5
ENST00000576994.5
CDS TCA 72 bp GAGCCCTTAGCTGCACATGACTATGGAGCCTCCTGCTaGCATCTGGATAGGCCAGGTCCCCAAAATGAGGAG +
Preference number: 6 (lower is better)
Translates to: EPLAAHDYGASC*HLDRPGPQNEE
Trigger: CTCCTCATTTTGGGGACCTGGCCTATCCAGATGTCAGCAGGAGGCTCCATAGTCATGTGCAGCTAAGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565980.1
CDS CCA 72 bp GCACATGGAAGGGTCTCAGGCTCTATGCTGAGGTGCTaGCTTGATCCTTCAGATACTGGGGAGCTGCTGACT +
Preference number: 6 (lower is better)
Translates to: AHGRVSGSMLRC*LDPSDTGELLT
Trigger: AGTCAGCAGCTCCCCAGTATCTGAAGGATCAAGCCAGCACCTCAGCATAGAGCCTGAGACCCTTCCATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565980.1
CDS GCA 72 bp GCTCCCATTCCTCCCATCTGGAAGACCACCCTGTTCTaGTCTCTTTCACAGGTGCGGAAGACAACTCGATCA +
Preference number: 6 (lower is better)
Translates to: APIPPIWKTTLF*SLSQVRKTTRS
Trigger: TGATCGAGTTGTCTTCCGCACCTGTGAAAGAGAGCAGAACAGGGTGGTCTTCCAGATGGGAGGAATGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432752.5
CDS GCA 72 bp GATATCCTGCGCAGGGAACACATCTGGGAAAACAGCTaGAACCTCGGATACCAGCACGGGACAAGCTATCTC +
Preference number: 6 (lower is better)
Translates to: DILRREHIWENS*NLGYQHGTSYL
Trigger: GAGATAGCTTGTCCCGTGCTGGTATCCGAGGTTGCAGCTGTTTTCCCAGATGTGTTCCCTGCGCAGGATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564781.1
CDS CCA 72 bp TCAGGAGGGCATGCAGCAATGGAGTCTCTCACCATCTaGAAGACCACCCTGTTCTGCTCTCTTTCACAGGTG +
Preference number: 6 (lower is better)
Translates to: SGGHAAMESLTI*KTTLFCSLSQV
Trigger: CACCTGTGAAAGAGAGCAGAACAGGGTGGTCTTCCAGATGGTGAGAGACTCCATTGCTGCATGCCCTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564975.5
CDS CCA 72 bp GCCATCGTTGTACAATGTACCCCAGGTATTCAACACTaGCCTGGCACAGGGCATGAGTTGGGAAATCCCAGG +
Preference number: 6 (lower is better)
Translates to: AIVVQCTPGIQH*PGTGHELGNPR
Trigger: CCTGGGATTTCCCAACTCATGCCCTGTGCCAGGCCAGTGTTGAATACCTGGGGTACATTGTACAACGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564975.5
CDS CCA 72 bp TCAGAATTTAGGTTTCTCTTGCCCTCCTGTGGTCACTaGGGCTTGTACCAGCCGACAGATGTGCCCCACAGA +
Preference number: 6 (lower is better)
Translates to: SEFRFLLPSCGH*GLYQPTDVPHR
Trigger: TCTGTGGGGCACATCTGTCGGCTGGTACAAGCCCCAGTGACCACAGGAGGGCAAGAGAAACCTAAATTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576994.5
CDS TCA 72 bp AAGAGTGCTGAGGATCTTCTCAATCTTGTCAGGGTCTaGCAGCAGGGCAGCTCCCATTCCTCCCATCTGGAA +
Preference number: 6 (lower is better)
Translates to: KSAEDLLNLVRV*QQGSSHSSHLE
Trigger: TTCCAGATGGGAGGAATGGGAGCTGCCCTGCTGTCAGACCCTGACAAGATTGAGAAGATCCTCAGCACTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432752.5
CDS TCA 72 bp GGTCTGAGCAAGTGTATCAAGGAGAGCTGTGGAAGCTaGGCACCGACTGCCACCTCTAGGTACAGGAAGAAA +
Preference number: 6 (lower is better)
Translates to: GLSKCIKESCGS*APTATSRYRKK
Trigger: TTTCTTCCTGTACCTAGAGGTGGCAGTCGGTGCTCAGCTTCCACAGCTCTCCTTGATACACTTGCTCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571081.6
CDS GCA 72 bp TCTGGAAGACCACCCTGTTCTGCTCTCTTTCACAGGTaGGGAAGACAACTCGATCATCAGGGGCGACAAAGT +
Preference number: 6 (lower is better)
Translates to: SGRPPCSALFHR*GRQLDHQGRQS
Trigger: ACTTTGTCGCCCCTGATGATCGAGTTGTCTTCCGCACCTGTGAAAGAGAGCAGAACAGGGTGGTCTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000562246.2
ENST00000564975.5
ENST00000565263.6
ENST00000566306.5
ENST00000568099.6
ENST00000570709.6
ENST00000571081.6
ENST00000575677.5
CDS CAA 90 bp CACAGTAAACAATGTCCGCTCCATAATCCAGGGCCAGCAGCCTCATaGGAAGAGTCCCTACCCGAACCATTGGGGCCAGGATTAGCTTAT +
Preference number: 6 (lower is better)
Translates to: HSKQCPLHNPGPAAS*EESLPEPLGPGLAY
Trigger: ATAAGCTAATCCTGGCCCCAATGGTTCGGGTAGGGACTCTTCCAATGAGGCTGCTGGCCCTGGATTATGGAGCGGACATTGTTTACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000562246.2
ENST00000564781.1
ENST00000564975.5
ENST00000565263.6
ENST00000566306.5
ENST00000567100.5
ENST00000568099.6
ENST00000570709.6
ENST00000571081.6
ENST00000575677.5
ENST00000576994.5
CDS CAA 90 bp AATCCAGGGCCAGCAGCCTCATTGGAAGAGTCCCTACCCGAACCATaGGGGCCAGGATTAGCTTATTATGGTAACACAGAGAGAGGCTAT +
Preference number: 6 (lower is better)
Translates to: NPGPAASLEESLPEP*GPGLAYYGNTERGY
Trigger: ATAGCCTCTCTCTGTGTTACCATAATAAGCTAATCCTGGCCCCAATGGTTCGGGTAGGGACTCTTCCAATGAGGCTGCTGGCCCTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000562246.2
ENST00000564781.1
ENST00000564975.5
ENST00000565263.6
ENST00000566306.5
ENST00000567100.5
ENST00000568099.6
ENST00000569289.5
ENST00000570709.6
ENST00000571081.6
ENST00000575677.5
ENST00000576994.5
CDS GCA 72 bp ATGGAGTCTCTCACCATCTGGAAGACCACCCTGTTCTaGTCTCTTTCACAGGTGCGGAAGACAACTCGATCA +
Preference number: 6 (lower is better)
Translates to: MESLTIWKTTLF*SLSQVRKTTRS
Trigger: TGATCGAGTTGTCTTCCGCACCTGTGAAAGAGAGCAGAACAGGGTGGTCTTCCAGATGGTGAGAGACTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564975.5
CDS CAA 72 bp CCAGCAGCCTCATTGGAAGAGTCCCTACCCGAACCATaGGGGCCAGGATTAGCTTATTATGGTAACACAGAG +
Preference number: 6 (lower is better)
Translates to: PAASLEESLPEP*GPGLAYYGNTE
Trigger: CTCTGTGTTACCATAATAAGCTAATCCTGGCCCCAATGGTTCGGGTAGGGACTCTTCCAATGAGGCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000358896.10
ENST00000432752.5
ENST00000561965.1
ENST00000562246.2
ENST00000564781.1
ENST00000564975.5
ENST00000565263.6
ENST00000566306.5
ENST00000567100.5
ENST00000568099.6
ENST00000569289.5
ENST00000570709.6
ENST00000571081.6
ENST00000575677.5
ENST00000576994.5
CDS GCA 72 bp TCCAACCTAAGTCAAATGAAGGCTGCCTGTATCACATaGTCCTCCCAAGCAAAAGTGCCCAGTGGAGAAAGG +
Preference number: 6 (lower is better)
Translates to: SNLSQMKAACIT*SSQAKVPSGER
Trigger: CCTTTCTCCACTGGGCACTTTTGCTTGGGAGGAGCATGTGATACAGGCAGCCTTCATTTGACTTAGGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565980.1
CDS CCA 72 bp AATTCTTTGTTTGATATCCTGCGCAGGGAACACATCTaGGAAAACAGCTGCAACCTCGGATACCAGCACGGG +
Preference number: 6 (lower is better)
Translates to: NSLFDILRREHI*ENSCNLGYQHG
Trigger: CCCGTGCTGGTATCCGAGGTTGCAGCTGTTTTCCCAGATGTGTTCCCTGCGCAGGATATCAAACAAAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564781.1
CDS CAA 90 bp AGATTAATCTTGCCTCTCCAGCTCATATCAGAATTTAGGTTTCTCTaGCCCTCCTGTGGTCACTGGGGCTTGTACCAGCCGACAGATGTG +
Preference number: 6 (lower is better)
Translates to: RLILPLQLISEFRFL*PSCGHWGLYQPTDV
Trigger: CACATCTGTCGGCTGGTACAAGCCCCAGTGACCACAGGAGGGCAAGAGAAACCTAAATTCTGATATGAGCTGGAGAGGCAAGATTAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576994.5
CDS CCA 72 bp CTGTATCACATGCTCCTCCCAAGCAAAAGTGCCCAGTaGAGAAAGGCACAAATACACAATGACCTCAAGTGT +
Preference number: 6 (lower is better)
Translates to: LYHMLLPSKSAQ*RKAQIHNDLKC
Trigger: ACACTTGAGGTCATTGTGTATTTGTGCCTTTCTCCACTGGGCACTTTTGCTTGGGAGGAGCATGTGATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565980.1
CDS CAA 90 bp GTAAAGGACTACAAGCCCTTTGGCCAACTTGCATGGAGCCATCACTaGAGTGAACAAGATTCACATAAGAAAGCAACAGAAGAGGTTGAG +
Preference number: 6 (lower is better)
Translates to: VKDYKPFGQLAWSHH*SEQDSHKKATEEVE
Trigger: CTCAACCTCTTCTGTTGCTTTCTTATGTGAATCTTGTTCACTCAAGTGATGGCTCCATGCAAGTTGGCCAAAGGGCTTGTAGTCCTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569289.5
CDS TCA 72 bp CTCCCTTGGTGGAATATTGTTTTGGACAGCCCATGTTaGCATCAATACCAGCCACATCATTTTCTACAAGCC +
Preference number: 6 (lower is better)
Translates to: LPWWNIVLDSPC*HQYQPHHFLQA
Trigger: GGCTTGTAGAAAATGATGTGGCTGGTATTGATGTCAACATGGGCTGTCCAAAACAATATTCCACCAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358896.10
ENST00000561965.1
ENST00000562246.2
ENST00000565263.6
ENST00000575677.5
CDS CAA 72 bp TACAAGCCCTTTGGCCAACTTGCATGGAGCCATCACTaGAGTGAACAAGATTCACATAAGAAAGCAACAGAA +
Preference number: 6 (lower is better)
Translates to: YKPFGQLAWSHH*SEQDSHKKATE
Trigger: TTCTGTTGCTTTCTTATGTGAATCTTGTTCACTCAAGTGATGGCTCCATGCAAGTTGGCCAAAGGGCTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569289.5
CDS CAA 90 bp TTTGTTCTGATACTTCAGGATTACTTTGATATATGTGTTCTGGCTTaGTACAGAGTAATTCTTTGTTTGATATCCTGCGCAGGGAACACA +
Preference number: 6 (lower is better)
Translates to: FVLILQDYFDICVLA*YRVILCLISCAGNT
Trigger: TGTGTTCCCTGCGCAGGATATCAAACAAAGAATTACTCTGTACAAAGCCAGAACACATATATCAAAGTAATCCTGAAGTATCAGAACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564781.1
CDS CAA 90 bp TTTGTTCTGATACTTCAGGATTACTTTGATATATGTGTTCTGGCTTaGTACAGAGTAATTCTTTGTTTGATATCCGGTCCTGATAGAGGA +
Preference number: 6 (lower is better)
Translates to: FVLILQDYFDICVLA*YRVILCLISGPDRG
Trigger: TCCTCTATCAGGACCGGATATCAAACAAAGAATTACTCTGTACAAAGCCAGAACACATATATCAAAGTAATCCTGAAGTATCAGAACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571081.6