RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DTX4 (Homo sapiens)

Ensembl gene IDs: ENSG00000110042

Ensembl transcript IDs: ENST00000227451.4, ENST00000527475.1, ENST00000531902.1, ENST00000532982.5

Found 346 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCAGCAATaGACACACGCCCACACACACACGCGCATGCACAGACACAGAGGG +
Preference number: 1 (lower is better)
Translates to: ECRDMTGLPFKLAQQ*THAHTHTRMHRHRG
Trigger: CCCTCTGTGTCTGTGCATGCGCGTGTGTGTGTGGGCGTGTGTGCATTGCTGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR TCA 90 bp GCCCTGTGGTGCAGTAACCTTGGGACCAGTCTCCTGGTCTGCTGGTaGGATACAATGGCTGCCTGCCGACAGGAGACACAGGGACAAGGA +
Preference number: 1 (lower is better)
Translates to: ALWCSNLGTSLLVCW*DTMAACRQETQGQG
Trigger: TCCTTGTCCCTGTGTCTCCTGTCGGCAGGCAGCCATTGTATCTCACCAGCAGACCAGGAGACTGGTCCCAAGGTTACTGCACCACAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR GCA 90 bp CGGCTGAGGCAAGAAACCCCGGCTTCCCAAAGCCAGGATATGGAGTaGCTAAGCACTGCCCATACCCTAGGTGTGCTGACCATGCCCCTA +
Preference number: 1 (lower is better)
Translates to: RLRQETPASQSQDME*LSTAHTLGVLTMPL
Trigger: TAGGGGCATGGTCAGCACACCTAGGGTATGGGCAGTGCTTAGGCACTCCATATCCTGGCTTTGGGAAGCCGGGGTTTCTTGCCTCAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR GCA 90 bp AGAAACCCCGGCTTCCCAAAGCCAGGATATGGAGTGCCTAAGCACTaGCCATACCCTAGGTGTGCTGACCATGCCCCTACTTGGGAGGTG +
Preference number: 1 (lower is better)
Translates to: RNPGFPKPGYGVPKH*PYPRCADHAPTWEV
Trigger: CACCTCCCAAGTAGGGGCATGGTCAGCACACCTAGGGTATGGGCAGTGCTTAGGCACTCCATATCCTGGCTTTGGGAAGCCGGGGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 90 bp GCAGTAACCTTGGGACCAGTCTCCTGGTCTGCTGGTGAGATACAATaGCTGCCTGCCGACAGGAGACACAGGGACAAGGATGGCAGAGCA +
Preference number: 1 (lower is better)
Translates to: AVTLGPVSWSAGEIQ*LPADRRHRDKDGRA
Trigger: TGCTCTGCCATCCTTGTCCCTGTGTCTCCTGTCGGCAGGCAGCCATTGTATCTCACCAGCAGACCAGGAGACTGGTCCCAAGGTTACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR TCA 90 bp ATCAGAACTGGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATaGCGGGCCTTCCCTTCAAGCTGGCCCAGCAATGCACACACGCCC +
Preference number: 1 (lower is better)
Translates to: IRTGVWHLAKQSAGT*RAFPSSWPSNAHTP
Trigger: GGGCGTGTGTGCATTGCTGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR GCA 90 bp CAAAGAGGAACCCCAGAGTCCATCCATCCACATGAGAGAACCAGATaGCTCTTTGGACAGGTGAGAGCTGTGAGGAGGAGAGGAGGGCCC +
Preference number: 1 (lower is better)
Translates to: QRGTPESIHPHERTR*LFGQVRAVRRRGGP
Trigger: GGGCCCTCCTCTCCTCCTCACAGCTCTCACCTGTCCAAAGAGGCATCTGGTTCTCTCATGTGGATGGATGGACTCTGGGGTTCCTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 90 bp GAACGTCAAAGGACCACAGCCTGGCTGTTGGAGCCCCATCAGAACTaGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATGACGGGC +
Preference number: 1 (lower is better)
Translates to: ERQRTTAWLLEPHQN*GLASCKTECRDMTG
Trigger: GCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATGGGGCTCCAACAGCCAGGCTGTGGTCCTTTGACGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR GCA 90 bp AGAGGAGGGCCCAGAGAAGCCAAGGACTGTGATGACAGCAGAATGTaGTCCCAGAGGCTTTTCCTTCTCCGACCCTCTTGGGAAGAAGTG +
Preference number: 1 (lower is better)
Translates to: RGGPREAKDCDDSRM*SQRLFLLRPSWEEV
Trigger: CACTTCTTCCCAAGAGGGTCGGAGAAGGAAAAGCCTCTGGGAGCACATTCTGCTGTCATCACAGTCCTTGGCTTCTCTGGGCCCTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 90 bp CGGGATAGGTTGGCAACAGGTGAGGAACGTCAAAGGACCACAGCCTaGCTGTTGGAGCCCCATCAGAACTGGGGTTTGGCATCTTGCAAA +
Preference number: 1 (lower is better)
Translates to: RDRLATGEERQRTTA*LLEPHQNWGLASCK
Trigger: TTTGCAAGATGCCAAACCCCAGTTCTGATGGGGCTCCAACAGCCAGGCTGTGGTCCTTTGACGTTCCTCACCTGTTGCCAACCTATCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR TCA 90 bp GGAAAGAGAGCAAAGGCTCAGCACCAGCACATCCACAGAACTGGGTaGCAGGCAGGTGAATCGACTGACAGGCAGGTGAATCGACTATCC +
Preference number: 1 (lower is better)
Translates to: GKRAKAQHQHIHRTG*QAGESTDRQVNRLS
Trigger: GGATAGTCGATTCACCTGCCTGTCAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCTTTGCTCTCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR TCA 90 bp TCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGACAGGCAGGTaGATCGACTATCCACCCCAATGTCAAAATGGCTGGAGGCCTAAC +
Preference number: 1 (lower is better)
Translates to: STELGDRQVNRLTGR*IDYPPQCQNGWRPN
Trigger: GTTAGGCCTCCAGCCATTTTGACATTGGGGTGGATAGTCGATTCACCTGCCTGTCAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 90 bp GACAGCAGAATGTGCTCCCAGAGGCTTTTCCTTCTCCGACCCTCTTaGGAAGAAGTGCTTCCTTGCTCTACACCAAGGCATCAGTTTCTG +
Preference number: 1 (lower is better)
Translates to: DSRMCSQRLFLLRPS*EEVLPCSTPRHQFL
Trigger: CAGAAACTGATGCCTTGGTGTAGAGCAAGGAAGCACTTCTTCCCAAGAGGGTCGGAGAAGGAAAAGCCTCTGGGAGCACATTCTGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 90 bp GGCTCCACTCACAGTGACTCGATGAAACTCATGGAATCTTTGAGCTaGTCTAGAATGAGTTGGGAAGAAGGCTGTGGGCTCCTCTCCCTG +
Preference number: 1 (lower is better)
Translates to: GSTHSDSMKLMESLS*SRMSWEEGCGLLSL
Trigger: CAGGGAGAGGAGCCCACAGCCTTCTTCCCAACTCATTCTAGACCAGCTCAAAGATTCCATGAGTTTCATCGAGTCACTGTGAGTGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 90 bp CACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATAGGTTaGCAACAGGTGAGGAACGTCAAAGGACCACAGCCTGGCTGTTGG +
Preference number: 1 (lower is better)
Translates to: HSSVFIGVSVHYGIG*QQVRNVKGPQPGCW
Trigger: CCAACAGCCAGGCTGTGGTCCTTTGACGTTCCTCACCTGTTGCCAACCTATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 90 bp AGCCCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTaGGGTTTCAGTTCACTACGGGATAGGTTGGCAACAGGTGAGGAA +
Preference number: 1 (lower is better)
Translates to: SPHLIASPQAQFCLH*GFSSLRDRLATGEE
Trigger: TTCCTCACCTGTTGCCAACCTATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 90 bp TCAGAGCTCCCTCTGGTGGAGCTGATCAACATCCCTGTAACCATTTaGAAAGAGAGCAAAGGCTCAGCACCAGCACATCCACAGAACTGG +
Preference number: 1 (lower is better)
Translates to: SELPLVELINIPVTI*KESKGSAPAHPQNW
Trigger: CCAGTTCTGTGGATGTGCTGGTGCTGAGCCTTTGCTCTCTTTCCAAATGGTTACAGGGATGTTGATCAGCTCCACCAGAGGGAGCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 90 bp CCACCCCAATGTCAAAATGGCTGGAGGCCTAACAGCAAGCAGCTATaGGGCTGGCTTTATGAAAGATTGGCCTCCAGTTCCCATCTAAGT +
Preference number: 1 (lower is better)
Translates to: PPQCQNGWRPNSKQL*GWLYERLASSSHLS
Trigger: ACTTAGATGGGAACTGGAGGCCAATCTTTCATAAAGCCAGCCCCATAGCTGCTTGCTGTTAGGCCTCCAGCCATTTTGACATTGGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 90 bp CAATGTCAAAATGGCTGGAGGCCTAACAGCAAGCAGCTATGGGGCTaGCTTTATGAAAGATTGGCCTCCAGTTCCCATCTAAGTACCATT +
Preference number: 1 (lower is better)
Translates to: QCQNGWRPNSKQLWG*LYERLASSSHLSTI
Trigger: AATGGTACTTAGATGGGAACTGGAGGCCAATCTTTCATAAAGCCAGCCCCATAGCTGCTTGCTGTTAGGCCTCCAGCCATTTTGACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR TCA 90 bp CAGATTGAAGCCTTCATAGAAACAAGACTGGATGGAGATGAGCTCTaGTCCAATCTTGAAAAGAAATATAAAAGGATGAGTTCAGCCCTC +
Preference number: 1 (lower is better)
Translates to: QIEAFIETRLDGDEL*SNLEKKYKRMSSAL
Trigger: GAGGGCTGAACTCATCCTTTTATATTTCTTTTCAAGATTGGATCAGAGCTCATCTCCATCCAGTCTTGTTTCTATGAAGGCTTCAATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR TCA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGCCCAACCTTGCACAGTaGGAGCTCCCTGCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLPNLAQ*ELPASS
Trigger: GCTGGAGGCAGGGAGCTCTCACTGTGCAAGGTTGGG...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR GCA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGACAGTGAGAGCTCCCTaGCTCCAGCAGAGGGAGAAT +
Preference number: 2 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLTVRAP*LQQREN
Trigger: ATTCTCCCTCTGCTGGAGGCAGGGAGCTCTCACTGT...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCAGGAACAGACCCAGGATaGCCCTCATCCCATCTCCCT +
Preference number: 2 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPGTDPG*PSSHLP
Trigger: AGGGAGATGGGATGAGGGCCATCCTGGGTCTGTTCC...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CAA 90 bp GGAGGGATGAGGGATGGACACAGGGCAGGAGGGGAGGATAGAAAGTaGGGAGGGCAGGACACCAACTTCTTCTACATTGACTCACTCTCC +
Preference number: 2 (lower is better)
Translates to: GGMRDGHRAGGEDRK*GGQDTNFFYIDSLS
Trigger: GGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTCCTGCCCTCCCAACTTTCTATCCTCCCCTCCTGCCCTGTGTCCATCCCTCATCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR TCA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGGGGCTCCACTCACAGTaGCTCGATGAAACTCATGGA +
Preference number: 2 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLGLHSQ*LDETHG
Trigger: TCCATGAGTTTCATCGAGTCACTGTGAGTGGAGCCC...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATGTCCTGCAGTCTCCATaGCCCCTCCCACCTCAAAGC +
Preference number: 2 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDVLQSP*PLPPQS
Trigger: GCTTTGAGGTGGGAGGGGCCATGGAGACTGCAGGAC...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR TCA 90 bp CTCCCTGCTGTAAGTCAATCTATAATAGATGAGGGAGATGAGGGACCCAGCAGCCAGAGTGCAGGGACATaGCGGGCCTTCCCTTCAAGC +
Preference number: 2 (lower is better)
Translates to: LPAVSQSIIDEGDEGPSSQSAGT*RAFPSS
Trigger: GCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTG...GCTGCTGGGTCCCTCATCTCCCTCATCTATTATAGATTGACTTACAGCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR GCA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCAAGCCAGGATATGGAGTaGCTAAGCACTGCCCATACC +
Preference number: 2 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPSQDME*LSTAHT
Trigger: GGTATGGGCAGTGCTTAGGCACTCCATATCCTGGCT...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR GCA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTAAGCTGGCCCAGCAATaGACACACGCCCACACACAC +
Preference number: 2 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSKLAQQ*THAHTH
Trigger: GTGTGTGTGGGCGTGTGTGCATTGCTGGGCCAGCTT...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR GCA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGTGGGGTTTGGCATCTTaGAAAACAGAGTGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLWGLAS*KTECRD
Trigger: GTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCA...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTTGGGAAGAAGGCTGTaGGCTCCTCTCCCTGAGGAC +
Preference number: 2 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSLGRRL*APLPED
Trigger: GTCCTCAGGGAGAGGAGCCCACAGCCTTCTTCCCAA...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTGCACAGAGCCCAGCATaGGCTCCACTCACAGTGACT +
Preference number: 2 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSAQSPA*APLTVT
Trigger: AGTCACTGTGAGTGGAGCCCATGCTGGGCTCTGTGC...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR TCA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCAGTCCATCCATCCACATaGGAGAACCAGATGCCTCTT +
Preference number: 2 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPVHPST*ENQMPL
Trigger: AAGAGGCATCTGGTTCTCTCATGTGGATGGATGGAC...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCGTCTGGCTCCCACTGTaGTTGGGAGGGATGAGGGAT +
Preference number: 2 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTVWLPL*LGGMRD
Trigger: ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGAC...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCATCGCTATATTCAGTCTaGCTCCCACTGTGGTTGGGA +
Preference number: 2 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPSLYSV*LPLWLG
Trigger: TCCCAACCACAGTGGGAGCCAGACTGAATATAGCGA...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp CTCCCTGCTGTAAGTCAATCTATAATAGATGAGGGAGATGAGGGACCCAGCAGCCAAAGGACCACAGCCTaGCTGTTGGAGCCCCATCAG +
Preference number: 2 (lower is better)
Translates to: LPAVSQSIIDEGDEGPSSQRTTA*LLEPHQ
Trigger: CTGATGGGGCTCCAACAGCCAGGCTGTGGTCCTTTG...GCTGCTGGGTCCCTCATCTCCCTCATCTATTATAGATTGACTTACAGCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGAAGCAGCTATGGGGCTaGCTTTATGAAAGATTGGCC +
Preference number: 2 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLKQLWG*LYERLA
Trigger: GGCCAATCTTTCATAAAGCCAGCCCCATAGCTGCTT...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CAA 90 bp GCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATAGGTaGGCAACAGGTGAGGAACGTCAAAGGACCACAGCCTGGCTGTTG +
Preference number: 2 (lower is better)
Translates to: AQFCLHWGFSSLRDR*ATGEERQRTTAWLL
Trigger: CAACAGCCAGGCTGTGGTCCTTTGACGTTCCTCACCTGTTGCCAACCTATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR GCA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGTGGGACACAACAAGATaGAGATTGGACCAGACCATA +
Preference number: 2 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLWDTTR*RLDQTI
Trigger: TATGGTCTGGTCCAATCTGCATCTTGTTGTGTCCCA...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp AGAGAGGGTCTAGAAACAGCATCATGGGATGCCACTCCAAAGAGGAACCCCAGAGCACCAAAAACTCCATaGGAACAGACCCAGGATGGC +
Preference number: 2 (lower is better)
Translates to: REGLETASWDATPKRNPRAPKTP*EQTQDG
Trigger: GCCATCCTGGGTCTGTTCCCATGGAGTTTTTGGTGC...TCTGGGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTTTCTAGACCCTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGATTTCAAAGGGGGAATTaGGTTTCCCTTCTTGATCCC +
Preference number: 2 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGFQRGN*VSLLDP
Trigger: GGGATCAAGAAGGGAAACCCAATTCCCCCTTTGAAA...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CAA 90 bp ATCAGAGCTCCCTCTGGTGGAGCTGATCAACATCCCTGTAACCATTaGGAAAGAGAGCAAAGGCTCAGCACCAGCACATCCACAGAACTG +
Preference number: 2 (lower is better)
Translates to: IRAPSGGADQHPCNH*EREQRLSTSTSTEL
Trigger: CAGTTCTGTGGATGTGCTGGTGCTGAGCCTTTGCTCTCTTTCCAAATGGTTACAGGGATGTTGATCAGCTCCACCAGAGGGAGCTCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp CTCCCTGCTGTAAGTCAATCTATAATAGATGAGGGAGATGAGGGACCCAGCAGCGGGAGGATAGAAAGTTaGGAGGGCAGGACACCAACT +
Preference number: 2 (lower is better)
Translates to: LPAVSQSIIDEGDEGPSSGRIES*EGRTPT
Trigger: AGTTGGTGTCCTGCCCTCCCAACTTTCTATCCTCCC...GCTGCTGGGTCCCTCATCTCCCTCATCTATTATAGATTGACTTACAGCAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCCTTCTCCGACCCTCTTaGGAAGAAGTGCTTCCTTGC +
Preference number: 2 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTLLRPS*EEVLPC
Trigger: GCAAGGAAGCACTTCTTCCCAAGAGGGTCGGAGAAG...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR GCA 90 bp CATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATATCTTGCAAAACAGAGTaGAGGGACATGACGGGCCTT +
Preference number: 2 (lower is better)
Translates to: HLPRHSSVFIGVSVHYGISCKTE*RDMTGL
Trigger: AAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGA...TATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR GCA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCGAAATTGCCCTGTGGTaGAGTAACCTTGGGACCAGT +
Preference number: 2 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTEIALW*SNLGTS
Trigger: ACTGGTCCCAAGGTTACTGCACCACAGGGCAATTTC...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATCCCCTACTTGGGAGGTaGGGTAGGGAGGGGATTCCT +
Preference number: 2 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDPLLGR*GREGIP
Trigger: AGGAATCCCCTCCCTACCCCACCTCCCAAGTAGGGG...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGACAACAAGATGCAGATTaGACCAGACCATATTGTGAT +
Preference number: 2 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGQQDAD*TRPYCD
Trigger: ATCACAATATGGTCTGGTCCAATCTGCATCTTGTTG...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR GCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGAAAGAGATTCTCTCCCTaGTGTAAGTCAATCTATAAT +
Preference number: 2 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGKRFSP*CKSIYN
Trigger: ATTATAGATTGACTTACAGCAGGGAGAGAATCTCTT...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGACATCTCCCTTTGTGTTaGATGAGATTTATGAATGAT +
Preference number: 2 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGHLPLC*MRFMND
Trigger: ATCATTCATAAATCTCATCCAACACAAAGGGAGATG...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CAA 90 bp AACTCCATGGGAACAGACCCAGGATGGCCCTCATCCCATCTCCCTTaGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTG +
Preference number: 2 (lower is better)
Translates to: NSMGTDPGWPSSHLP*CWMRFMNDVAIFSL
Trigger: CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATGGGATGAGGGCCATCCTGGGTCTGTTCCCATGGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CAA 90 bp TGGAGGCCTAACAGCAAGCAGCTATGGGGCTGGCTTTATGAAAGATaGGCCTCCAGTTCCCATCTAAGTACCATTTTTGAAGGTTCTCTT +
Preference number: 2 (lower is better)
Translates to: WRPNSKQLWGWLYER*ASSSHLSTIFEGSL
Trigger: AAGAGAACCTTCAAAAATGGTACTTAGATGGGAACTGGAGGCCAATCTTTCATAAAGCCAGCCCCATAGCTGCTTGCTGTTAGGCCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATTGGTCTAGAATGAGTTaGGAAGAAGGCTGTGGGCTC +
Preference number: 2 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDWSRMS*EEGCGL
Trigger: GAGCCCACAGCCTTCTTCCCAACTCATTCTAGACCA...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CCA 90 bp CATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATAATGGAATCTTTGAGCTaGTCTAGAATGAGTTGGGAA +
Preference number: 2 (lower is better)
Translates to: HLPRHSSVFIGVSVHYGIMESLS*SRMSWE
Trigger: TTCCCAACTCATTCTAGACCAGCTCAAAGATTCCAT...TATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR GCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATGAAGAAGTGCTTCCTTaGTCTACACCAAGGCATCAG +
Preference number: 2 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDEEVLP*STPRHQ
Trigger: CTGATGCCTTGGTGTAGAGCAAGGAAGCACTTCTTC...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR GCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATGATGACAGCAGAATGTaGTCCCAGAGGCTTTTCCTT +
Preference number: 2 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDDDSRM*SQRLFL
Trigger: AAGGAAAAGCCTCTGGGAGCACATTCTGCTGTCATC...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR TCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATAGAAATATAAAAGGATaGGTTCAGCCCTCACCTCAT +
Preference number: 2 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDRNIKG*VQPSPH
Trigger: ATGAGGTGAGGGCTGAACTCATCCTTTTATATTTCT...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR GCA 72 bp CCCAGCAATGCACACACGCCCACACACACACGCGCATaGACAGACACAGAGGGCACAGAGCCCAGCATGGGC +
Preference number: 3 (lower is better)
Translates to: PSNAHTPTHTRA*TDTEGTEPSMG
Trigger: GCCCATGCTGGGCTCTGTGCCCTCTGTGTCTGTGCATGCGCGTGTGTGTGTGGGCGTGTGTGCATTGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CAA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGACCACAGCCTGGCTGTaGGAGCCCCATCAGAACTGG +
Preference number: 3 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLTTAWL*EPHQNW
Trigger: CCAGTTCTGATGGGGCTCCAACAGCCAGGCTGTGGT...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 72 bp GAGGGGATTCCTGCCTACCCAGCACCAAAAACTCCATaGGAACAGACCCAGGATGGCCCTCATCCCATCTCC +
Preference number: 3 (lower is better)
Translates to: EGIPAYPAPKTP*EQTQDGPHPIS
Trigger: GGAGATGGGATGAGGGCCATCCTGGGTCTGTTCCCATGGAGTTTTTGGTGCTGGGTAGGCAGGAATCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 72 bp TTGCCCTGTGGTGCAGTAACCTTGGGACCAGTCTCCTaGTCTGCTGGTGAGATACAATGGCTGCCTGCCGAC +
Preference number: 3 (lower is better)
Translates to: LPCGAVTLGPVS*SAGEIQWLPAD
Trigger: GTCGGCAGGCAGCCATTGTATCTCACCAGCAGACCAGGAGACTGGTCCCAAGGTTACTGCACCACAGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR TCA 72 bp GGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATaGCGGGCCTTCCCTTCAAGCTGGCCCAGCAATGCA +
Preference number: 3 (lower is better)
Translates to: GVWHLAKQSAGT*RAFPSSWPSNA
Trigger: TGCATTGCTGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR TCA 72 bp TGCAGTAACCTTGGGACCAGTCTCCTGGTCTGCTGGTaGGATACAATGGCTGCCTGCCGACAGGAGACACAG +
Preference number: 3 (lower is better)
Translates to: CSNLGTSLLVCW*DTMAACRQETQ
Trigger: CTGTGTCTCCTGTCGGCAGGCAGCCATTGTATCTCACCAGCAGACCAGGAGACTGGTCCCAAGGTTACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR GCA 72 bp GGCTTCCCAAAGCCAGGATATGGAGTGCCTAAGCACTaGCCATACCCTAGGTGTGCTGACCATGCCCCTACT +
Preference number: 3 (lower is better)
Translates to: GFPKPGYGVPKH*PYPRCADHAPT
Trigger: AGTAGGGGCATGGTCAGCACACCTAGGGTATGGGCAGTGCTTAGGCACTCCATATCCTGGCTTTGGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR GCA 72 bp CAAGAAACCCCGGCTTCCCAAAGCCAGGATATGGAGTaGCTAAGCACTGCCCATACCCTAGGTGTGCTGACC +
Preference number: 3 (lower is better)
Translates to: QETPASQSQDME*LSTAHTLGVLT
Trigger: GGTCAGCACACCTAGGGTATGGGCAGTGCTTAGGCACTCCATATCCTGGCTTTGGGAAGCCGGGGTTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CAA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGAGGAGGAGATAGGGTCTaGGGACACAACAAGATGCAG +
Preference number: 3 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGGGDRV*GHNKMQ
Trigger: CTGCATCTTGTTGTGTCCCAAGACCCTATCTCCTCC...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR TCA 72 bp GCAAAGGCTCAGCACCAGCACATCCACAGAACTGGGTaGCAGGCAGGTGAATCGACTGACAGGCAGGTGAAT +
Preference number: 3 (lower is better)
Translates to: AKAQHQHIHRTG*QAGESTDRQVN
Trigger: ATTCACCTGCCTGTCAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR GCA 72 bp CCCAGAGAAGCCAAGGACTGTGATGACAGCAGAATGTaGTCCCAGAGGCTTTTCCTTCTCCGACCCTCTTGG +
Preference number: 3 (lower is better)
Translates to: PREAKDCDDSRM*SQRLFLLRPSW
Trigger: CCAAGAGGGTCGGAGAAGGAAAAGCCTCTGGGAGCACATTCTGCTGTCATCACAGTCCTTGGCTTCTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR TCA 72 bp CTGGGTGACAGGCAGGTGAATCGACTGACAGGCAGGTaGATCGACTATCCACCCCAATGTCAAAATGGCTGG +
Preference number: 3 (lower is better)
Translates to: LGDRQVNRLTGR*IDYPPQCQNGW
Trigger: CCAGCCATTTTGACATTGGGGTGGATAGTCGATTCACCTGCCTGTCAGTCGATTCACCTGCCTGTCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR GCA 72 bp ACCCCAGAGTCCATCCATCCACATGAGAGAACCAGATaGCTCTTTGGACAGGTGAGAGCTGTGAGGAGGAGA +
Preference number: 3 (lower is better)
Translates to: TPESIHPHERTR*LFGQVRAVRRR
Trigger: TCTCCTCCTCACAGCTCTCACCTGTCCAAAGAGGCATCTGGTTCTCTCATGTGGATGGATGGACTCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 72 bp CCCAGCACCAAAAACTCCATGGGAACAGACCCAGGATaGCCCTCATCCCATCTCCCTTTGTGTTGGATGAGA +
Preference number: 3 (lower is better)
Translates to: PSTKNSMGTDPG*PSSHLPLCWMR
Trigger: TCTCATCCAACACAAAGGGAGATGGGATGAGGGCCATCCTGGGTCTGTTCCCATGGAGTTTTTGGTGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 72 bp CCTGTTCTCCTCCCTGGCCCCCAATTCGTTCCTTACTaGGAGCCAAAGGCAATAAGAATGTTGGGGAGGAGA +
Preference number: 3 (lower is better)
Translates to: PVLLPGPQFVPY*EPKAIRMLGRR
Trigger: TCTCCTCCCCAACATTCTTATTGCCTTTGGCTCCCAGTAAGGAACGAATTGGGGGCCAGGGAGGAGAACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 72 bp ATGTGCTCCCAGAGGCTTTTCCTTCTCCGACCCTCTTaGGAAGAAGTGCTTCCTTGCTCTACACCAAGGCAT +
Preference number: 3 (lower is better)
Translates to: MCSQRLFLLRPS*EEVLPCSTPRH
Trigger: ATGCCTTGGTGTAGAGCAAGGAAGCACTTCTTCCCAAGAGGGTCGGAGAAGGAAAAGCCTCTGGGAGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CAA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATAGGTaGGCAACAGGTGAGGAACGT +
Preference number: 3 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSSLRDR*ATGEER
Trigger: ACGTTCCTCACCTGTTGCCAACCTATCCCGTAGTGA...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CAA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCCCTATTTCTGCATCCTaGCGGCCAAGAAGCTCAGCA +
Preference number: 3 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTPISAS*RPRSSA
Trigger: TGCTGAGCTTCTTGGCCGCAAGGATGCAGAAATAGG...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 72 bp GTCTTCATTGGGGTTTCAGTTCACTACGGGATAGGTTaGCAACAGGTGAGGAACGTCAAAGGACCACAGCCT +
Preference number: 3 (lower is better)
Translates to: VFIGVSVHYGIG*QQVRNVKGPQP
Trigger: AGGCTGTGGTCCTTTGACGTTCCTCACCTGTTGCCAACCTATCCCGTAGTGAACTGAAACCCCAATGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 72 bp AATGGCTGGAGGCCTAACAGCAAGCAGCTATGGGGCTaGCTTTATGAAAGATTGGCCTCCAGTTCCCATCTA +
Preference number: 3 (lower is better)
Translates to: NGWRPNSKQLWG*LYERLASSSHL
Trigger: TAGATGGGAACTGGAGGCCAATCTTTCATAAAGCCAGCCCCATAGCTGCTTGCTGTTAGGCCTCCAGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 72 bp TGTCAAAATGGCTGGAGGCCTAACAGCAAGCAGCTATaGGGCTGGCTTTATGAAAGATTGGCCTCCAGTTCC +
Preference number: 3 (lower is better)
Translates to: CQNGWRPNSKQL*GWLYERLASSS
Trigger: GGAACTGGAGGCCAATCTTTCATAAAGCCAGCCCCATAGCTGCTTGCTGTTAGGCCTCCAGCCATTTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CAA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCGGAAGAAGTGCTTCCTaGCTCTACACCAAGGCATCA +
Preference number: 3 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTGRSAS*LYTKAS
Trigger: TGATGCCTTGGTGTAGAGCAAGGAAGCACTTCTTCC...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CAA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTCATCAGAACTGGGGTTaGGCATCTTGCAAAACAGAG +
Preference number: 3 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSHQNWG*ASCKTE
Trigger: CTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 72 bp CTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTaGGGTTTCAGTTCACTACGGGATAGGTTGGCAACA +
Preference number: 3 (lower is better)
Translates to: LIASPQAQFCLH*GFSSLRDRLAT
Trigger: TGTTGCCAACCTATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CAA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCCCAACTTCTTCTACATaGACTCACTCTCCTCACTTC +
Preference number: 3 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTPTSST*THSPHF
Trigger: GAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGG...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR-3UTR CAA 90 bp AGAGAGGGTCTAGAAACAGCATCATGGGATGCCACTCCAAAGAGGAACCCCAGATCATCCCATCTCCCTTaGTGTTGGATGAGATTTATG +
Preference number: 3 (lower is better)
Translates to: REGLETASWDATPKRNPRSSHLP*CWMRFM
Trigger: CATAAATCTCATCCAACACAAAGGGAGATGGGATGA...TCTGGGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTTTCTAGACCCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR TCA 72 bp AAGTGCTTCCTTGCTCTACACCAAGGCATCAGTTTCTaGTGTCACAGCAGTTTAGTGATTCACCCCTTTGCC +
Preference number: 3 (lower is better)
Translates to: KCFLALHQGISF*CHSSLVIHPFA
Trigger: GGCAAAGGGGTGAATCACTAAACTGCTGTGACATCAGAAACTGATGCCTTGGTGTAGAGCAAGGAAGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 72 bp GACCCAGGATGGCCCTCATCCCATCTCCCTTTGTGTTaGATGAGATTTATGAATGATGTCGCTATATTCAGT +
Preference number: 3 (lower is better)
Translates to: DPGWPSSHLPLC*MRFMNDVAIFS
Trigger: ACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATGGGATGAGGGCCATCCTGGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 72 bp AAAGGCAATAAGAATGTTGGGGAGGAGATAGGGTCTTaGGACACAACAAGATGCAGATTGGACCAGACCATA +
Preference number: 3 (lower is better)
Translates to: KGNKNVGEEIGS*DTTRCRLDQTI
Trigger: TATGGTCTGGTCCAATCTGCATCTTGTTGTGTCCCAAGACCCTATCTCCTCCCCAACATTCTTATTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CCA 72 bp ACCCAGCAGCTCTGGGCTCTGATTAGCAAATTTGCATaGAAACAGATTGAAGCCTTCATAGAAACAAGACTG +
Preference number: 3 (lower is better)
Translates to: TQQLWALISKFA*KQIEAFIETRL
Trigger: CAGTCTTGTTTCTATGAAGGCTTCAATCTGTTTCCATGCAAATTTGCTAATCAGAGCCCAGAGCTGCTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGGGGGTCCGCTGCTGCTaGCGCTGCTCTGTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLGVRCC*RCSVGS
Trigger: CGACCCCACAGAGCAGCGGCAGCAGCAGCGGACCCC...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGAAGGAGCAGGGGGACATaGGGGGCGAGGTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGRSRGT*GARWLA
Trigger: GGCCAGCCACCTCGCCCCCCATGTCCCCCTGCTCCT...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGTTGCGCCTCGGCCTCTaGAGACGCCGGGGTGGGATC +
Preference number: 4 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLLRLGL*RRRGGI
Trigger: GATCCCACCCCGGCGTCTGCAGAGGCCGAGGCGCAA...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGACGCTGCTGCTGCCGCTaGTCTGTGGGGTCGAGTCGC +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGRCCCR*SVGSSR
Trigger: GCGACTCGACCCCACAGAGCAGCGGCAGCAGCAGCG...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGAACAGGCCCCCGCCTTaGAAAAGCCACTCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLNRPPP*KSHSAG
Trigger: GCCCGCCGAGTGGCTTTTGCAAGGCGGGGGCCTGTT...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATGCCGGGGTCCGCTGCTaGTGCCGCTGCTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDAGVRC*CRCSVG
Trigger: CCCCACAGAGCAGCGGCAGCAGCAGCGGACCCCGGC...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTGCCGCCGGGGTCCGCTaGTGCTGCCGCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSAAGVR*CCRCSV
Trigger: CACAGAGCAGCGGCAGCAGCAGCGGACCCCGGCGGC...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp AGAGAGGGTCTAGAAACAGCATCATGGGATGCCACTCCAAAGAGGAACCCCAGACTGCAGACGCCGGGGTaGGATCTCGCCGCACGGCCG +
Preference number: 4 (lower is better)
Translates to: REGLETASWDATPKRNPRLQTPG*DLAARP
Trigger: CGGCCGTGCGGCGAGATCCCACCCCGGCGTCTGCAG...TCTGGGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTTTCTAGACCCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGACCACCGCCTCGATGTaGTGGCTCACCGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLTTASM*WLTAGL
Trigger: CAGCCCAGCGGTGAGCCACCACATCGAGGCGGTGGT...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CTCCCTGCTGTAAGTCAATCTATAATAGATGAGGGAGATGAGGGACCCAGCAGCGCTCCTCCCCAGCCGTaGATCCACCGGGGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: LPAVSQSIIDEGDEGPSSAPPQP*IHRGRD
Trigger: GTCCCGGCCCCGGTGGATGCACGGCTGGGGAGGAGC...GCTGCTGGGTCCCTCATCTCCCTCATCTATTATAGATTGACTTACAGCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGAGCTGCCGCTGCTCTGTaGGGTCGAGTCGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGAAAAL*GRVASC
Trigger: GCATGAAGCGACTCGACCCCACAGAGCAGCGGCAGC...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCACCGGATCACCTGCGATaGGGCGGTCTTCAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPPDHLR*GGLQWA
Trigger: GGCCCACTGAAGACCGCCCCATCGCAGGTGATCCGG...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGAATCAGCACCCGGGACTaGGCAATGGCCAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGISTRD*AMASRC
Trigger: GCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGAT...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCATGGACTGCAGGTCGATaGTGTAGGGCGCGAGACGGC +
Preference number: 4 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPWTAGR*CRARDG
Trigger: GCCGTCTCGCGCCCTACATCATCGACCTGCAGTCCA...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGCTGACTGGCCAGGACTaGGCCTTAGGCAAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLLTGQD*ALGKVP
Trigger: AGGGACCTTGCCTAAGGCTCAGTCCTGGCCAGTCAG...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CTCCCTGCTGTAAGTCAATCTATAATAGATGAGGGAGATGAGGGACCCAGCAGCCTCAGCTCCGGCCCATaGGCTCCTCCCCAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: LPAVSQSIIDEGDEGPSSLSSGP*APPQPC
Trigger: GCACGGCTGGGGAGGAGCCCATGGGCCGGAGCTGAG...GCTGCTGGGTCCCTCATCTCCCTCATCTATTATAGATTGACTTACAGCAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGATGGCAGGAGAGCCCATaGTTGTCCCAGTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGWQESP*LSQWAC
Trigger: GCATGCCCACTGGGACAACCATGGGCTCTCCTGCCA...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGATGCCAATGGCAAAAATaGGGCGGCGATCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGCQWQK*GGDPRP
Trigger: TGGCCTGGGATCGCCGCCTCATTTTTGCCATTGGCA...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGAGGACCTCATTCCAGATaGCGGTGTCTGACTCGCCTG +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGGPHSR*RCLTRL
Trigger: CAGGCGAGTCAGACACCGTCATCTGGAATGAGGTCC...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTGGACGCCAGCGGCCGTaGTCGTTCAGCCATTCCCAG +
Preference number: 4 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSGRQRP*SFSHSQ
Trigger: CTGGGAATGGCTGAACGAGCACGGCCGCTGGCGTCC...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGTTGTCCCAGTGGGCATaGTGGAGGCTTGTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLLSQWA*WRLVSG
Trigger: TCCGGAGACAAGCCTCCAGCATGCCCACTGGGACAA...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTCCCGGGACTGGGCAATaGCCAGTCGCTGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSPGTGQ*PVAAGW
Trigger: CCAACCTGCAGCGACTGGCCATTGCCCAGTCCCGGG...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGACAAAGGACCACAGCCTaGCTGTTGGAGCCCCATCAG +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGQRTTA*LLEPHQ
Trigger: CTGATGGGGCTCCAACAGCCAGGCTGTGGTCCTTTG...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATCGTTGGCGCTGGGTCTaGCGGTTGATCTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDRWRWV*RLIWPM
Trigger: CATGGGCCAGATCAACCGTCAGACCCAGCGCCAACG...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CTCCCTGCTGTAAGTCAATCTATAATAGATGAGGGAGATGAGGGACCCAGCAGCGCAGTGGGGGTAGCTTaGCCACTCCAGGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LPAVSQSIIDEGDEGPSSAVGVA*PLQEAA
Trigger: TGCCGCCTCCTGGAGTGGTCAAGCTACCCCCACTGC...GCTGCTGGGTCCCTCATCTCCCTCATCTATTATAGATTGACTTACAGCAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCGCTTTGGTGGCCTGGTaGGACACACAGGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTALVAW*DTQAAP
Trigger: CGGGGCTGCCTGTGTGTCTCACCAGGCCACCAAAGC...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CATCAGAACTGGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCAGAGTGCAGGGACATaGCGGGCCTTCCCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: HQNWGLASCKTECRDMTGQSAGT*RAFPSS
Trigger: GCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTG...GCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATCCACCCTTCCGGTCTTaGTGTTGGGTCCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDPPFRS*CWVLGD
Trigger: GTCCCCCAGGACCCAACAGCAAGACCGGAAGGGTGG...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGGATCCCAGTGATTCCTaGCAAGGCAGGGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLDPSDS*QGRVDR
Trigger: CCTGTCAACCCTGCCTTGGCAGGAATCACTGGGATC...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCATCTTCACTGGGACTGTaGGGACCCCAGAGGCGATCA +
Preference number: 4 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPSSLGL*GPQRRS
Trigger: TGATCGCCTCTGGGGTCCCCACAGTCCCAGTGAAGA...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCAGAACTGGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATGACGGGCTCCTCAGAGATGCCCTaGGCAGCCAGTTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HQNWGLASCKTECRDMTGSSEMP*AASSAS
Trigger: GCTGGCTGAACTGGCTGCCCAGGGCATCTCTGAGGA...GCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCAGCCTGAGGGGGCCGTaGGGCGTTCCATACAGATGG +
Preference number: 4 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTSLRGP*GVPYRW
Trigger: CCATCTGTATGGAACGCCTCACGGCCCCCTCAGGCT...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATCCAGATGACGGTGTCTaGCTCGCCTGTGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDPDDGV*LACGAG
Trigger: TCCAGCACCACAGGCGAGTCAGACACCGTCATCTGG...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTGTGGGCCTCGAATGGTaGCTGTGCTGTCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSVGLEW*LCCPVA
Trigger: AGCCACTGGACAGCACAGGCACCATTCGAGGCCCAC...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGGCAATGGCCAGTCGCTaGAGGTTGGTACGATTCAAG +
Preference number: 4 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLAMASR*RLVRFK
Trigger: CTTGAATCGTACCAACCTGCAGCGACTGGCCATTGC...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCAGGCAGGGCTTGTGGTTaGTTACAGACTCAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPGRACG*LQTQGG
Trigger: ACCTCCCTGAGTCTGTAAGCAACCACAAGCCCTGCC...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGAAGAGTTCCCGTGTCTTaGCGGAACTGGTTCATGGAC +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGRVPVS*RNWFMD
Trigger: GTCCATGAACCAGTTCCGCCAAGACACGGGAACTCT...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CTCCCTGCTGTAAGTCAATCTATAATAGATGAGGGAGATGAGGGACCCAGCAGCTGGCCCAGGGCTGACTaGCCAGGACTGAGCCTTAGG +
Preference number: 4 (lower is better)
Translates to: LPAVSQSIIDEGDEGPSSWPRAD*PGLSLR
Trigger: CCTAAGGCTCAGTCCTGGCCAGTCAGCCCTGGGCCA...GCTGCTGGGTCCCTCATCTCCCTCATCTATTATAGATTGACTTACAGCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTGCCTGTGCTGTCCAGTaGCTTGGCCCCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSACAVQ*LGPRAW
Trigger: CCAGGCTCTGGGGCCAAGCCACTGGACAGCACAGGC...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCTGGGTCCTGGGGGACTaGCAGGAGAGCCCATGGTTG +
Preference number: 4 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTWVLGD*QESPWL
Trigger: CAACCATGGGCTCTCCTGCCAGTCCCCCAGGACCCA...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATTTCCGGTCTTGCTGTTaGGTCCTGGGGGACTGGCAG +
Preference number: 4 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDFRSCC*VLGDWQ
Trigger: CTGCCAGTCCCCCAGGACCCAACAGCAAGACCGGAA...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCAGAACTGGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATGACGGGCAGACGTGGCCGCATCTaGACAGCTTCCCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: HQNWGLASCKTECRDMTGRRGRI*TASLPG
Trigger: ACCTGGTAGGGAAGCTGTCCAGATGCGGCCACGTCT...GCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCAGATGGTTTTGCAGTCTaGGTGGCCAGGCAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPDGFAV*VARQGV
Trigger: CACTCCTTGCCTGGCCACCCAGACTGCAAAACCATC...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCAAAGGTAACAGTGTCGTaGGAAGCCTCGGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPKVTVS*EASGAE
Trigger: TTCAGCGCCCGAGGCTTCCCACGACACTGTTACCTT...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGAACTCGCCTGTGGTGCTaGAGGTGCCAATGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGTRLWC*RCQWQK
Trigger: TTTTTGCCATTGGCACCTCCAGCACCACAGGCGAGT...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGACAGGTAATTGGCATCTaGGTAGCCATGGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGQVIGI*VAMASE
Trigger: CTCACTGGCCATGGCTACCCAGATGCCAATTACCTG...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp AGAGAGGGTCTAGAAACAGCATCATGGGATGCCACTCCAAAGAGGAACCCCAGACCCCTACTTGGGAGGTaGGGTAGGGAGGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: REGLETASWDATPKRNPRPLLGR*GREGIP
Trigger: AGGAATCCCCTCCCTACCCCACCTCCCAAGTAGGGG...TCTGGGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTTTCTAGACCCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGACACTACGGGATAGGTTaGCAACAGGTGAGGAACGTC +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGHYGIG*QQVRNV
Trigger: GACGTTCCTCACCTGTTGCCAACCTATCCCGTAGTG...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGAATGGGGCTGGCTTTATaGAAGATTGGCCTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGMGLAL*KIGLQF
Trigger: GAACTGGAGGCCAATCTTTCATAAAGCCAGCCCCAT...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp AGAGAGGGTCTAGAAACAGCATCATGGGATGCCACTCCAAAGAGGAACCCCAGACTCCTGGTCTGCTGGTaGGATACAATGGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: REGLETASWDATPKRNPRLLVCW*DTMAAC
Trigger: GCAGGCAGCCATTGTATCTCACCAGCAGACCAGGAG...TCTGGGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTTTCTAGACCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCAGGGGTCGTAGTAGTTaGGGCGAACTGGGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTRGRSS*GELGGE
Trigger: CTCTCCGCCCAGTTCGCCGCAACTACTACGACCCCT...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTGAGGCGGCATGTTCTTaGGGGTCACTGGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSEAACS*GSLAAV
Trigger: TACAGCTGCCAGTGACCCGCAAGAACATGCCGCCTC...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCCTCGAATGGTGCCTGTaGTGTCCAGTGGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTLEWCL*CPVAWP
Trigger: GGGCCAAGCCACTGGACAGCACAGGCACCATTCGAG...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGAAGATGCTCAGTGGGATaGAGGCTCTGGTTTGATCAG +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGRCSVG*RLWFDQ
Trigger: CTGATCAAACCAGAGCCTGCATCCCACTGAGCATCT...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATTCAGTGGGCCTCGAATaGTGCCTGTGCTGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDSVGLE*CLCCPV
Trigger: CACTGGACAGCACAGGCACCATTCGAGGCCCACTGA...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCAGCACCAAAAACTCCATaGGAACAGACCCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPAPKTP*EQTQDG
Trigger: GCCATCCTGGGTCTGTTCCCATGGAGTTTTTGGTGC...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATACCACAGCCTGGCTGTTaGAGCCCCATCAGAACTGGG +
Preference number: 4 (lower is better)
Translates to: HLPRHSSVFIGVSVHYGIPQPGC*SPIRTG
Trigger: CCCAGTTCTGATGGGGCTCCAACAGCCAGGCTGTGG...TATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCAGAACTGGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTCATGAGCACCAGGTaGCGATGTCCTTTCACGGAG +
Preference number: 4 (lower is better)
Translates to: HQNWGLASCKTECRDMTGLMSTR*RCPFTE
Trigger: CTCCGTGAAAGGACATCGCCACCTGGTGCTCATGAG...GCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CATCAGAACTGGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATGACGGGCGGGCTCCACTCACAGTaGCTCGATGAAACTCATGGA +
Preference number: 4 (lower is better)
Translates to: HQNWGLASCKTECRDMTGGLHSQ*LDETHG
Trigger: TCCATGAGTTTCATCGAGTCACTGTGAGTGGAGCCC...GCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTAAATGCCCGGCTCTCTaGAAACAGGCCCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSKCPAL*KQAPAL
Trigger: CAAGGCGGGGGCCTGTTTGCAGAGAGCCGGGCATTT...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATATGTCTCCGGATCACCTaGGATGGGGCGGTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: HLPRHSSVFIGVSVHYGICLRIT*DGAVFS
Trigger: ACTGAAGACCGCCCCATCGCAGGTGATCCGGAGACA...TATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CATCAGAACTGGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATGACGGGCTCCCTGGAGGTTGGGTaGCTGTCTTCACCCCATAAA +
Preference number: 4 (lower is better)
Translates to: HQNWGLASCKTECRDMTGSLEVG*LSSPHK
Trigger: TTTATGGGGTGAAGACAGGCACCCAACCTCCAGGGA...GCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGACATGAGAGAACCAGATaGCTCTTTGGACAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGHERTR*LFGQVR
Trigger: TCTCACCTGTCCAAAGAGGCATCTGGTTCTCTCATG...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCATGGGGTTTGGCATCTTaGAAAACAGAGTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPWGLAS*KTECRD
Trigger: GTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCA...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTTGGGGCGGTCTTCAGTaGGCCTCGAATGGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSWGGLQ*ASNGAC
Trigger: ACAGGCACCATTCGAGGCCCACTGAAGACCGCCCCA...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATACCATGGTTGTCCCAGTaGGCATGCTGGAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: HLPRHSSVFIGVSVHYGIPWLSQ*ACWRLV
Trigger: GACAAGCCTCCAGCATGCCCACTGGGACAACCATGG...TATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTTGGTACGATTCAAGGTaGCCAGGGCCACCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSWYDSR*PGPPFR
Trigger: CCGGAAGGGTGGCCCTGGCCACCTTGAATCGTACCA...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATCCAGTCGCTGCAGGTTaGTACGATTCAAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDPVAAG*YDSRWP
Trigger: TGGCCACCTTGAATCGTACCAACCTGCAGCGACTGG...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CTCCCTGCTGTAAGTCAATCTATAATAGATGAGGGAGATGAGGGACCCAGCAGCGGTGCAGTCCTCATCTaGTGGGTGCCGGACTTTCTG +
Preference number: 4 (lower is better)
Translates to: LPAVSQSIIDEGDEGPSSGAVLI*WVPDFL
Trigger: CAGAAAGTCCGGCACCCACCAGATGAGGACTGCACC...GCTGCTGGGTCCCTCATCTCCCTCATCTATTATAGATTGACTTACAGCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTATCTTCCCTGGAGGTTaGGTGCCTGTCTTCACCCCA +
Preference number: 4 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSIFPGG*VPVFTP
Trigger: TGGGGTGAAGACAGGCACCCAACCTCCAGGGAAGAT...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTGTTTTGCAGTCTGGGTaGCCAGGCAAGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSVLQSG*PGKEWG
Trigger: CCCCCACTCCTTGCCTGGCCACCCAGACTGCAAAAC...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTGTCCTGCAGTCTCCATaGCCCCTCCCACCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSVLQSP*PLPPQS
Trigger: GCTTTGAGGTGGGAGGGGCCATGGAGACTGCAGGAC...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATAGTCTGGCTCCCACTGTaGTTGGGAGGGATGAGGGAT +
Preference number: 4 (lower is better)
Translates to: HLPRHSSVFIGVSVHYGIVWLPL*LGGMRD
Trigger: ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGAC...TATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CTCCCTGCTGTAAGTCAATCTATAATAGATGAGGGAGATGAGGGACCCAGCAGCTTGGGAAGAAGGCTGTaGGCTCCTCTCCCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: LPAVSQSIIDEGDEGPSSLGRRL*APLPED
Trigger: GTCCTCAGGGAGAGGAGCCCACAGCCTTCTTCCCAA...GCTGCTGGGTCCCTCATCTCCCTCATCTATTATAGATTGACTTACAGCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CAA 72 bp AATGTGCTCCCAGAGGCTTTTCCTTCTCCGACCCTCTaGGGAAGAAGTGCTTCCTTGCTCTACACCAAGGCA +
Preference number: 4 (lower is better)
Translates to: NVLPEAFPSPTL*GRSASLLYTKA
Trigger: TGCCTTGGTGTAGAGCAAGGAAGCACTTCTTCCCAAGAGGGTCGGAGAAGGAAAAGCCTCTGGGAGCACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTGTGGGCTCCTCTCCCTaGGGACAGTTCAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSVGSSP*GQFRCS
Trigger: TGAGCATCTGAACTGTCCTCAGGGAGAGGAGCCCAC...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CATCAGAACTGGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATGACGGGCAGCTCAGCAGATACTTaGCCAGTGTGCGAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: HQNWGLASCKTECRDMTGSSADT*PVCEGR
Trigger: TCTACCTTCGCACACTGGTCAAGTATCTGCTGAGCT...GCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CATCAGAACTGGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATGACGGGCGCCATTGACCACGGCTaGCTTAACACTCATCACCAA +
Preference number: 4 (lower is better)
Translates to: HQNWGLASCKTECRDMTGAIDHG*LNTHHQ
Trigger: TTGGTGATGAGTGTTAAGGCAGCCGTGGTCAATGGC...GCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTCTGACTCGCCTGTGGTaGTGGAGGTGCCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSLTRLW*WRCQWQ
Trigger: TTGCCATTGGCACCTCCAGCACCACAGGCGAGTCAG...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATAGGAGTGCCTAAGCACTaGCCATACCCTAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: HLPRHSSVFIGVSVHYGIGVPKH*PYPRCA
Trigger: AGCACACCTAGGGTATGGGCAGTGCTTAGGCACTCC...TATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGATGGGACACAACAAGATaGAGATTGGACCAGACCATA +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGWDTTR*RLDQTI
Trigger: TATGGTCTGGTCCAATCTGCATCTTGTTGTGTCCCA...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp AGAGAGGGTCTAGAAACAGCATCATGGGATGCCACTCCAAAGAGGAACCCCAGAGTGAGATACAATGGCTaGCTGCCGACAGGAGACACA +
Preference number: 4 (lower is better)
Translates to: REGLETASWDATPKRNPRVRYNG*LPTGDT
Trigger: TGTGTCTCCTGTCGGCAGGCAGCCATTGTATCTCAC...TCTGGGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTTTCTAGACCCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCAAACTCTGTCTTGTGGTaGACCTCATTCCAGATGACG +
Preference number: 4 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPNSVLW*TSFQMT
Trigger: CGTCATCTGGAATGAGGTCCACCACAAGACAGAGTT...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCACCAAACTCTGTCTTGTaGTGGACCTCATTCCAGATG +
Preference number: 4 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPPNSVL*WTSFQM
Trigger: CATCTGGAATGAGGTCCACCACAAGACAGAGTTTGG...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCAGAACTGGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATGACGGGCACCTCAAAGCTTTTCTaGCCTCAGTCCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HQNWGLASCKTECRDMTGTSKLF*PQSFSW
Trigger: CCAGGAGAAGGACTGAGGCCAGAAAAGCTTTGAGGT...GCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTGGGAGGATAGAAAGTTaGGAGGGCAGGACACCAACT +
Preference number: 4 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSGRIES*EGRTPT
Trigger: AGTTGGTGTCCTGCCCTCCCAACTTTCTATCCTCCC...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTGCACAGAGCCCAGCATaGGCTCCACTCACAGTGACT +
Preference number: 4 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSAQSPA*APLTVT
Trigger: AGTCACTGTGAGTGGAGCCCATGCTGGGCTCTGTGC...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCGCTGGTGAGATACAATaGCTGCCTGCCGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTAGEIQ*LPADRR
Trigger: TCTCCTGTCGGCAGGCAGCCATTGTATCTCACCAGC...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATCCCAACCTTGCACAGTaGGAGCTCCCTGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDPNLAQ*ELPASS
Trigger: GCTGGAGGCAGGGAGCTCTCACTGTGCAAGGTTGGG...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTCCTTTCTTGTACCAGTaGGCCTTCCCCCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSPFLYQ*AFPQFS
Trigger: AGAAAACTGGGGGAAGGCTCACTGGTACAAGAAAGG...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CTCCCTGCTGTAAGTCAATCTATAATAGATGAGGGAGATGAGGGACCCAGCAGCGTCGCTTCATGCAAATaGCCGGCTCTCTGCAAACAG +
Preference number: 4 (lower is better)
Translates to: LPAVSQSIIDEGDEGPSSVASCK*PALCKQ
Trigger: CTGTTTGCAGAGAGCCGGGCATTTGCATGAAGCGAC...GCTGCTGGGTCCCTCATCTCCCTCATCTATTATAGATTGACTTACAGCAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CTCCCTGCTGTAAGTCAATCTATAATAGATGAGGGAGATGAGGGACCCAGCAGCAGCCAGGATATGGAGTaGCTAAGCACTGCCCATACC +
Preference number: 4 (lower is better)
Translates to: LPAVSQSIIDEGDEGPSSSQDME*LSTAHT
Trigger: GGTATGGGCAGTGCTTAGGCACTCCATATCCTGGCT...GCTGCTGGGTCCCTCATCTCCCTCATCTATTATAGATTGACTTACAGCAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp AGAGAGGGTCTAGAAACAGCATCATGGGATGCCACTCCAAAGAGGAACCCCAGAAACAGCATCATGGGATaGCACTCCAAAGAGGAACCC +
Preference number: 4 (lower is better)
Translates to: REGLETASWDATPKRNPRNSIMG*HSKEEP
Trigger: GGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTT...TCTGGGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTTTCTAGACCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTCAGCCCTCACCTCATTaGATCTCCCCAGGCACAGTT +
Preference number: 4 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSQPSPH*ISPGTV
Trigger: AACTGTGCCTGGGGAGATGCAATGAGGTGAGGGCTG...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTGAAATTGCCCTGTGGTaGAGTAACCTTGGGACCAGT +
Preference number: 4 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSEIALW*SNLGTS
Trigger: ACTGGTCCCAAGGTTACTGCACCACAGGGCAATTTC...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CTCCCTGCTGTAAGTCAATCTATAATAGATGAGGGAGATGAGGGACCCAGCAGCCCCTCAGCCTATTTCTaGATCCTTGCGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LPAVSQSIIDEGDEGPSSPSAYF*ILAAKK
Trigger: CTTCTTGGCCGCAAGGATGCAGAAATAGGCTGAGGG...GCTGCTGGGTCCCTCATCTCCCTCATCTATTATAGATTGACTTACAGCAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CATCAGAACTGGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCCCCCAGTTTTCTCATaGACACAACAGTGCAATACC +
Preference number: 4 (lower is better)
Translates to: HQNWGLASCKTECRDMTGPPVFS*TQQCNT
Trigger: GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGG...GCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCTCCCTTTGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTGGTGGTGGCTCACCGCTaGGCTGTAGGGACGCCAGCG +
Preference number: 4 (lower is better)
Translates to: HLPLCWMRFMNDVAIFSLVVAHR*AVGTPA
Trigger: CGCTGGCGTCCCTACAGCCCAGCGGTGAGCCACCAC...CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATAGGCGTTCCATACAGATaGTGCAGTCCTCATCTGGTG +
Preference number: 4 (lower is better)
Translates to: HLPRHSSVFIGVSVHYGIGVPYR*CSPHLV
Trigger: CACCAGATGAGGACTGCACCATCTGTATGGAACGCC...TATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCAAATGGTCTTGCAGGTTaGACACTGCAAACTTCCATC +
Preference number: 4 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPNGLAG*TLQTSI
Trigger: GATGGAAGTTTGCAGTGTCCAACCTGCAAGACCATT...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CTCCCTGCTGTAAGTCAATCTATAATAGATGAGGGAGATGAGGGACCCAGCAGCCTTCTCCGACCCTCTTaGGAAGAAGTGCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LPAVSQSIIDEGDEGPSSLLRPS*EEVLPC
Trigger: GCAAGGAAGCACTTCTTCCCAAGAGGGTCGGAGAAG...GCTGCTGGGTCCCTCATCTCCCTCATCTATTATAGATTGACTTACAGCAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTGGTCTAGAATGAGTTaGGAAGAAGGCTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSWSRMS*EEGCGL
Trigger: GAGCCCACAGCCTTCTTCCCAACTCATTCTAGACCA...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp AGAGAGGGTCTAGAAACAGCATCATGGGATGCCACTCCAAAGAGGAACCCCAGAGAGCCCCATCAGAACTaGGGTTTGGCATCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: REGLETASWDATPKRNPREPHQN*GLASCK
Trigger: TTTGCAAGATGCCAAACCCCAGTTCTGATGGGGCTC...TCTGGGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTTTCTAGACCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp AGAGAGGGTCTAGAAACAGCATCATGGGATGCCACTCCAAAGAGGAACCCCAGAGGGACCCAGCAGCTCTaGGCTCTGATTAGCAAATTT +
Preference number: 4 (lower is better)
Translates to: REGLETASWDATPKRNPRGTQQL*ALISKF
Trigger: AAATTTGCTAATCAGAGCCCAGAGCTGCTGGGTCCC...TCTGGGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTTTCTAGACCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCAGAACTGGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCAATGTCAAAATGGCTaGAGGCCTAACAGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: HQNWGLASCKTECRDMTGQCQNG*RPNSKQ
Trigger: CTGCTTGCTGTTAGGCCTCCAGCCATTTTGACATTG...GCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CAA 72 bp TGTCTTCATTGGGGTTTCAGTTCACTACGGGATAGGTaGGCAACAGGTGAGGAACGTCAAAGGACCACAGCC +
Preference number: 4 (lower is better)
Translates to: CLHWGFSSLRDR*ATGEERQRTTA
Trigger: GGCTGTGGTCCTTTGACGTTCCTCACCTGTTGCCAACCTATCCCGTAGTGAACTGAAACCCCAATGAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATGGAAGCCTCGGGCGCTaGAACTCTTCCCAGGATTCG +
Preference number: 4 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDGSLGR*NSSQDS
Trigger: CGAATCCTGGGAAGAGTTTCAGCGCCCGAGGCTTCC...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATAGTCCATCCATCCACATaGGAGAACCAGATGCCTCTT +
Preference number: 4 (lower is better)
Translates to: HLPRHSSVFIGVSVHYGIVHPST*ENQMPL
Trigger: AAGAGGCATCTGGTTCTCTCATGTGGATGGATGGAC...TATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGAAGAAATATAAAAGGATaGGTTCAGCCCTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGRNIKG*VQPSPH
Trigger: ATGAGGTGAGGGCTGAACTCATCCTTTTATATTTCT...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTATCCACAGAACTGGGTaGCAGGCAGGTGAATCGACT +
Preference number: 4 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSIHRTG*QAGEST
Trigger: AGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGAT...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATCACAGGCAGCCCCGCTaGACTCATGAGGATCCCAGT +
Preference number: 4 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDHRQPR*THEDPS
Trigger: ACTGGGATCCTCATGAGTGCAGCGGGGCTGCCTGTG...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCCTCATCTGGTGGGTaGCGGACTTTCTGTAGATAT +
Preference number: 4 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSSSSGG*RTFCRY
Trigger: ATATCTACAGAAAGTCCGGCACCCACCAGATGAGGA...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CTCCCTGCTGTAAGTCAATCTATAATAGATGAGGGAGATGAGGGACCCAGCAGCGTTCCATACAGATGGTaGAGTCCTCATCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LPAVSQSIIDEGDEGPSSVPYRW*SPHLVG
Trigger: ACCCACCAGATGAGGACTGCACCATCTGTATGGAAC...GCTGCTGGGTCCCTCATCTCCCTCATCTATTATAGATTGACTTACAGCAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATCCCCATAAATGGTCTTaGAGGTTGGACACTGCAAAC +
Preference number: 4 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDPHKWS*RLDTAN
Trigger: GTTTGCAGTGTCCAACCTGCAAGACCATTTATGGGG...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp AGAGAGGGTCTAGAAACAGCATCATGGGATGCCACTCCAAAGAGGAACCCCAGAGATGACAGCAGAATGTaGTCCCAGAGGCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: REGLETASWDATPKRNPRDDSRM*SQRLFL
Trigger: AAGGAAAAGCCTCTGGGAGCACATTCTGCTGTCATC...TCTGGGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTTTCTAGACCCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCAGAACTGGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATGACGGGCTCTTCACCCCATAAATaGTCTTGCAGGTTGGACACT +
Preference number: 4 (lower is better)
Translates to: HQNWGLASCKTECRDMTGSSPHK*SCRLDT
Trigger: AGTGTCCAACCTGCAAGACCATTTATGGGGTGAAGA...GCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTCATTATCCAGGTAATTaGCATCTGGGTAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSHYPGN*HLGSHG
Trigger: GCCATGGCTACCCAGATGCCAATTACCTGGATAATG...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCTCGCTATATTCAGTCTaGCTCCCACTGTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTSLYSV*LPLWLG
Trigger: TCCCAACCACAGTGGGAGCCAGACTGAATATAGCGA...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATGAGGAGATAGGGTCTTaGGACACAACAAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDEEIGS*DTTRCR
Trigger: TCTGCATCTTGTTGTGTCCCAAGACCCTATCTCCTC...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATAAGCAGCTCTGGGCTCTaGTTAGCAAATTTGCATGGA +
Preference number: 4 (lower is better)
Translates to: HLPRHSSVFIGVSVHYGISSSGL*LANLHG
Trigger: TCCATGCAAATTTGCTAATCAGAGCCCAGAGCTGCT...TATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATTGCTGTCCTCAGAGATaGCCTGGGCAGCCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDCCPQR*PGQPVQ
Trigger: CTGAACTGGCTGCCCAGGGCATCTCTGAGGACAGCA...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATCCTTCTCCTGGGCAGTaGTGTCCTCAGAGATGCCCT +
Preference number: 4 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDPSPGQ*CPQRCP
Trigger: AGGGCATCTCTGAGGACAGCACTGCCCAGGAGAAGG...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATAAGCTGGCCCAGCAATaGACACACGCCCACACACAC +
Preference number: 4 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDKLAQQ*THAHTH
Trigger: GTGTGTGTGGGCGTGTGTGCATTGCTGGGCCAGCTT...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTTCTTGCGGCTTGTGTTaGAAACCCCTGGGATGGATT +
Preference number: 4 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSSCGLC*KPLGWI
Trigger: AATCCATCCCAGGGGTTTCCAACACAAGCCGCAAGA...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATGCCTTCCCTTCAAGCTaGCCCAGCAATGCACACACG +
Preference number: 4 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDAFPSS*PSNAHT
Trigger: CGTGTGTGCATTGCTGGGCCAGCTTGAAGGGAAGGC...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTACACAGGGACAAGGATaGCAGAGCAATTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSTQGQG*QSNSSH
Trigger: ATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTGT...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CAA 72 bp TTTCCTTCTCCGACCCTCTTGGGAAGAAGTGCTTCCTaGCTCTACACCAAGGCATCAGTTTCTGATGTCACA +
Preference number: 4 (lower is better)
Translates to: FPSPTLLGRSAS*LYTKASVSDVT
Trigger: TGTGACATCAGAAACTGATGCCTTGGTGTAGAGCAAGGAAGCACTTCTTCCCAAGAGGGTCGGAGAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATAGGCATGCTGGATGGTaGTGCCCACTTCCATGTCGT +
Preference number: 4 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDRHAGW*CPLPCR
Trigger: ACGACATGGAAGTGGGCATCACCATCCAGCATGCCT...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATCTGCCAAGGCAGGGTTaGCAGGACTGGACCCATTTA +
Preference number: 4 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDLPRQG*QDWTHL
Trigger: TAAATGGGTCCAGTCCTGTCAACCCTGCCTTGGCAG...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCCAAGGCATCAGTTTCTaGTGTCACAGCAGTTTAGTG +
Preference number: 4 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTQGISF*CHSSLV
Trigger: CACTAAACTGCTGTGACATCAGAAACTGATGCCTTG...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATCGACTGACAGGCAGGTaGATCGACTATCCACCCCAA +
Preference number: 4 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDRLTGR*IDYPPQ
Trigger: TTGGGGTGGATAGTCGATTCACCTGCCTGTCAGTCG...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCCCATTGTTGTACATaGCAACCAAGCAGTAGATGT +
Preference number: 4 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSSHCCT*QPSSRC
Trigger: ACATCTACTGCTTGGTTGCCATGTACAACAATGGGA...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCAGAACTGGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCAACAAGATGCAGATTaGACCAGACCATATTGTGAT +
Preference number: 4 (lower is better)
Translates to: HQNWGLASCKTECRDMTGQQDAD*TRPYCD
Trigger: ATCACAATATGGTCTGGTCCAATCTGCATCTTGTTG...GCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATCAATTCGTTCCTTACTaGGAGCCAAAGGCAATAAGA +
Preference number: 4 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDQFVPY*EPKAIR
Trigger: TCTTATTGCCTTTGGCTCCCAGTAAGGAACGAATTG...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATATTTCAAAGGGGGAATTaGGTTTCCCTTCTTGATCCC +
Preference number: 4 (lower is better)
Translates to: HLPRHSSVFIGVSVHYGIFQRGN*VSLLDP
Trigger: GGGATCAAGAAGGGAAACCCAATTCCCCCTTTGAAA...TATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCAACAGCAAGCAGCTATaGGGCTGGCTTTATGAAAGA +
Preference number: 4 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTNSKQL*GWLYER
Trigger: TCTTTCATAAAGCCAGCCCCATAGCTGCTTGCTGTT...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATCAGTGGCAGGGCTTGTaGTTGCTTACAGACTCAGGG +
Preference number: 4 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDQWQGL*LLTDSG
Trigger: CCCTGAGTCTGTAAGCAACCACAAGCCCTGCCACTG...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATGGGGGATGCTGTAGATaGTCCGGATGGTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDGGCCR*SGWFCS
Trigger: ACTGCAAAACCATCCGGATCATCTACAGCATCCCCC...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CATCTCCCTTTGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTGAGAACAGCACGAGGATaGGGTAGCCCCTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: HLPLCWMRFMNDVAIFSLRTARG*GSPYWA
Trigger: TGCCCAGTAGGGGCTACCTCATCCTCGTGCTGTTCT...CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CATCTCCCTTTGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTGGGTCGAGTCGCTTCATaGAAATGCCCGGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: HLPLCWMRFMNDVAIFSLGRVAS*KCPALC
Trigger: GCAGAGAGCCGGGCATTTGCATGAAGCGACTCGACC...CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCAAACACACACTATATTaGAGCCAGGCAAAGAGACCT +
Preference number: 4 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTKHTLY*SQAKRP
Trigger: AGGTCTCTTTGCCTGGCTGCAATATAGTGTGTGTTT...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCTCCCTTTGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTGTCCCAGTGGGCATGCTaGAGGCTTGTCTCCGGATCA +
Preference number: 4 (lower is better)
Translates to: HLPLCWMRFMNDVAIFSLSQWAC*RLVSGS
Trigger: TGATCCGGAGACAAGCCTCCAGCATGCCCACTGGGA...CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp AGAGAGGGTCTAGAAACAGCATCATGGGATGCCACTCCAAAGAGGAACCCCAGATGTGTTGGAAACCCCTaGGATGGATTTTATTTCACT +
Preference number: 4 (lower is better)
Translates to: REGLETASWDATPKRNPRCVGNP*DGFYFT
Trigger: AGTGAAATAAAATCCATCCCAGGGGTTTCCAACACA...TCTGGGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTTTCTAGACCCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CATCTCCCTTTGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTGACAGTGAGAGCTCCCTaGCTCCAGCAGAGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: HLPLCWMRFMNDVAIFSLTVRAP*LQQREN
Trigger: ATTCTCCCTCTGCTGGAGGCAGGGAGCTCTCACTGT...CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATTCTTGCAAAACAGAGTaGAGGGACATGACGGGCCTT +
Preference number: 4 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDSCKTE*RDMTGL
Trigger: AAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGA...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp CATCTCCCTTTGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTGGATACAATGGCTGCCTaGCGACAGGAGACACAGGGA +
Preference number: 4 (lower is better)
Translates to: HLPLCWMRFMNDVAIFSLDTMAA*RQETQG
Trigger: TCCCTGTGTCTCCTGTCGGCAGGCAGCCATTGTATC...CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCAGAACTGGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCATCTCCCTTTGTGTTaGATGAGATTTATGAATGAT +
Preference number: 4 (lower is better)
Translates to: HQNWGLASCKTECRDMTGHLPLC*MRFMND
Trigger: ATCATTCATAAATCTCATCCAACACAAAGGGAGATG...GCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCATGGAATCTTTGAGCTaGTCTAGAATGAGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTMESLS*SRMSWE
Trigger: TTCCCAACTCATTCTAGACCAGCTCAAAGATTCCAT...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATTTGGGACCAGTCTCCTaGTCTGCTGGTGAGATACAA +
Preference number: 4 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDLGPVS*SAGEIQ
Trigger: TTGTATCTCACCAGCAGACCAGGAGACTGGTCCCAA...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CAA 72 bp AAGAAATATAAAAGGATGAGTTCAGCCCTCACCTCATaGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGG +
Preference number: 4 (lower is better)
Translates to: KKYKRMSSALTS*HLPRHSSVFIG
Trigger: CCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGGGCTGAACTCATCCTTTTATATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCTCCCTTTGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTGGTACTCCATCTTCCCTaGAGGTTGGGTGCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: HLPLCWMRFMNDVAIFSLVLHLP*RLGACL
Trigger: AAGACAGGCACCCAACCTCCAGGGAAGATGGAGTAC...CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
3UTR CAA 72 bp AACAGCAAGCAGCTATGGGGCTGGCTTTATGAAAGATaGGCCTCCAGTTCCCATCTAAGTACCATTTTTGAA +
Preference number: 4 (lower is better)
Translates to: NSKQLWGWLYER*ASSSHLSTIFE
Trigger: TTCAAAAATGGTACTTAGATGGGAACTGGAGGCCAATCTTTCATAAAGCCAGCCCCATAGCTGCTTGCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR TCA 90 bp CATCTCCCTTTGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTGAAGGTAGAGACGGCATaGGGCTCTCCAAGTAATCTC +
Preference number: 4 (lower is better)
Translates to: HLPLCWMRFMNDVAIFSLKVETA*GSPSNL
Trigger: GAGATTACTTGGAGAGCCTCATGCCGTCTCTACCTT...CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR GCA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTAAGAGATTCTCTCCCTaGTGTAAGTCAATCTATAAT +
Preference number: 4 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSKRFSP*CKSIYN
Trigger: ATTATAGATTGACTTACAGCAGGGAGAGAATCTCTT...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCTCCCTTTGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTGAAGCAGCTATGGGGCTaGCTTTATGAAAGATTGGCC +
Preference number: 4 (lower is better)
Translates to: HLPLCWMRFMNDVAIFSLKQLWG*LYERLA
Trigger: GGCCAATCTTTCATAAAGCCAGCCCCATAGCTGCTT...CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCTCCCTTTGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTGCAGTTCTGTCTTCATTaGGGTTTCAGTTCACTACGG +
Preference number: 4 (lower is better)
Translates to: HLPLCWMRFMNDVAIFSLQFCLH*GFSSLR
Trigger: CCGTAGTGAACTGAAACCCCAATGAAGACAGAACTG...CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCTCCCTTTGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTGATCAGAACTGGGGTTTaGCATCTTGCAAAACAGAGT +
Preference number: 4 (lower is better)
Translates to: HLPLCWMRFMNDVAIFSLIRTGV*HLAKQS
Trigger: ACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGAT...CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CCA 90 bp CATCTCCCTTTGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTGATTAGCAAATTTGCATaGAAACAGATTGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: HLPLCWMRFMNDVAIFSLISKFA*KQIEAF
Trigger: GAAGGCTTCAATCTGTTTCCATGCAAATTTGCTAAT...CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS GCA 90 bp GCCTGGCTGGGACCGCGCGCCGCCGCCGCCGCCGGGGTCCGCTGCTaGTGCCGCTGCTCTGTGGGGTCGAGTCGCTTCATGCAAATGCCC +
Preference number: 5 (lower is better)
Translates to: AWLGPRAAAAAGVRC*CRCSVGSSRFMQMP
Trigger: GGGCATTTGCATGAAGCGACTCGACCCCACAGAGCAGCGGCAGCAGCAGCGGACCCCGGCGGCGGCGGCGGCGCGCGGTCCCAGCCAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS GCA 90 bp GGCGAGGCAAGGACCCAGCCCTCGCACCAGTTGCGCCTCGGCCTCTaGAGACGCCGGGGTGGGATCTCGCCGCACGGCCGCGCTCGGAAT +
Preference number: 5 (lower is better)
Translates to: GEARTQPSHQLRLGL*RRRGGISPHGRARN
Trigger: ATTCCGAGCGCGGCCGTGCGGCGAGATCCCACCCCGGCGTCTGCAGAGGCCGAGGCGCAACTGGTGCGAGGGCTGGGTCCTTGCCTCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS CCA 90 bp GCGGGGGCCGGCGCGGACCACCGCCTCGATGTGGTGGCTCACCGCTaGGCTGTAGGGACGCCAGCGGCCGTGCTCGTTCAGCCATTCCCA +
Preference number: 5 (lower is better)
Translates to: AGAGADHRLDVVAHR*AVGTPAAVLVQPFP
Trigger: TGGGAATGGCTGAACGAGCACGGCCGCTGGCGTCCCTACAGCCCAGCGGTGAGCCACCACATCGAGGCGGTGGTCCGCGCCGGCCCCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS GCA 90 bp CCCACACCACGCCCTTCCCAGGGGCCGAGGAGGGGTCGTAGTAGTTaGGGCGAACTGGGCGGAGAGTTCCCGTGTCTTGGCGGAACTGGT +
Preference number: 5 (lower is better)
Translates to: PTPRPSQGPRRGRSS*GELGGEFPCLGGTG
Trigger: ACCAGTTCCGCCAAGACACGGGAACTCTCCGCCCAGTTCGCCGCAACTACTACGACCCCTCCTCGGCCCCTGGGAAGGGCGTGGTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS GCA 90 bp ACCCCAGAGGCGATCAGCACCCGGGACTGGGCAATGGCCAGTCGCTaGAGGTTGGTACGATTCAAGGTGGCCAGGGCCACCCTTCCGGTC +
Preference number: 5 (lower is better)
Translates to: TPEAISTRDWAMASR*RLVRFKVARATLPV
Trigger: GACCGGAAGGGTGGCCCTGGCCACCTTGAATCGTACCAACCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGATCGCCTCTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CCA 90 bp TGGCCAGGGCCACCCTTCCGGTCTTGCTGTTGGGTCCTGGGGGACTaGCAGGAGAGCCCATGGTTGTCCCAGTGGGCATGCTGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: WPGPPFRSCCWVLGD*QESPWLSQWACWRL
Trigger: AAGCCTCCAGCATGCCCACTGGGACAACCATGGGCTCTCCTGCCAGTCCCCCAGGACCCAACAGCAAGACCGGAAGGGTGGCCCTGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CCA 90 bp GGACTGTGGGGACCCCAGAGGCGATCAGCACCCGGGACTGGGCAATaGCCAGTCGCTGCAGGTTGGTACGATTCAAGGTGGCCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: GLWGPQRRSAPGTGQ*PVAAGWYDSRWPGP
Trigger: TGGCCCTGGCCACCTTGAATCGTACCAACCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGATCGCCTCTGGGGTCCCCACAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS TCA 90 bp TGCTGTCCAGTGGCTTGGCCCCAGAGCCTGGCAGTGGGGGTAGCTTaGCCACTCCAGGAGGCGGCATGTTCTTGCGGGTCACTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: CCPVAWPQSLAVGVA*PLQEAACSCGSLAA
Trigger: AGCTGCCAGTGACCCGCAAGAACATGCCGCCTCCTGGAGTGGTCAAGCTACCCCCACTGCCAGGCTCTGGGGCCAAGCCACTGGACAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS GCA 90 bp GTCCTGGGGGACTGGCAGGAGAGCCCATGGTTGTCCCAGTGGGCATaGTGGAGGCTTGTCTCCGGATCACCTGCGATGGGGCGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: VLGDWQESPWLSQWA*WRLVSGSPAMGRSS
Trigger: TGAAGACCGCCCCATCGCAGGTGATCCGGAGACAAGCCTCCAGCATGCCCACTGGGACAACCATGGGCTCTCCTGCCAGTCCCCCAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CCA 90 bp GCTGGAGGCTTGTCTCCGGATCACCTGCGATGGGGCGGTCTTCAGTaGGCCTCGAATGGTGCCTGTGCTGTCCAGTGGCTTGGCCCCAGA +
Preference number: 5 (lower is better)
Translates to: AGGLSPDHLRWGGLQ*ASNGACAVQWLGPR
Trigger: TCTGGGGCCAAGCCACTGGACAGCACAGGCACCATTCGAGGCCCACTGAAGACCGCCCCATCGCAGGTGATCCGGAGACAAGCCTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CCA 90 bp CTGGGGGACTGGCAGGAGAGCCCATGGTTGTCCCAGTGGGCATGCTaGAGGCTTGTCTCCGGATCACCTGCGATGGGGCGGTCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: LGDWQESPWLSQWAC*RLVSGSPAMGRSSV
Trigger: CACTGAAGACCGCCCCATCGCAGGTGATCCGGAGACAAGCCTCCAGCATGCCCACTGGGACAACCATGGGCTCTCCTGCCAGTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CCA 90 bp GGGACTGGGCAATGGCCAGTCGCTGCAGGTTGGTACGATTCAAGGTaGCCAGGGCCACCCTTCCGGTCTTGCTGTTGGGTCCTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: GTGQWPVAAGWYDSR*PGPPFRSCCWVLGD
Trigger: GTCCCCCAGGACCCAACAGCAAGACCGGAAGGGTGGCCCTGGCCACCTTGAATCGTACCAACCTGCAGCGACTGGCCATTGCCCAGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CCA 90 bp TGTCCCAGTGGGCATGCTGGAGGCTTGTCTCCGGATCACCTGCGATaGGGCGGTCTTCAGTGGGCCTCGAATGGTGCCTGTGCTGTCCAG +
Preference number: 5 (lower is better)
Translates to: CPSGHAGGLSPDHLR*GGLQWASNGACAVQ
Trigger: CTGGACAGCACAGGCACCATTCGAGGCCCACTGAAGACCGCCCCATCGCAGGTGATCCGGAGACAAGCCTCCAGCATGCCCACTGGGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CCA 90 bp ATTCAAGGTGGCCAGGGCCACCCTTCCGGTCTTGCTGTTGGGTCCTaGGGGACTGGCAGGAGAGCCCATGGTTGTCCCAGTGGGCATGCT +
Preference number: 5 (lower is better)
Translates to: IQGGQGHPSGLAVGS*GTGRRAHGCPSGHA
Trigger: AGCATGCCCACTGGGACAACCATGGGCTCTCCTGCCAGTCCCCCAGGACCCAACAGCAAGACCGGAAGGGTGGCCCTGGCCACCTTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CCA 90 bp TGGTACGATTCAAGGTGGCCAGGGCCACCCTTCCGGTCTTGCTGTTaGGTCCTGGGGGACTGGCAGGAGAGCCCATGGTTGTCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: WYDSRWPGPPFRSCC*VLGDWQESPWLSQW
Trigger: CCACTGGGACAACCATGGGCTCTCCTGCCAGTCCCCCAGGACCCAACAGCAAGACCGGAAGGGTGGCCCTGGCCACCTTGAATCGTACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CCA 90 bp AGGCGATCAGCACCCGGGACTGGGCAATGGCCAGTCGCTGCAGGTTaGTACGATTCAAGGTGGCCAGGGCCACCCTTCCGGTCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: RRSAPGTGQWPVAAG*YDSRWPGPPFRSCC
Trigger: ACAGCAAGACCGGAAGGGTGGCCCTGGCCACCTTGAATCGTACCAACCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGATCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CCA 90 bp TTCACTGGGACTGTGGGGACCCCAGAGGCGATCAGCACCCGGGACTaGGCAATGGCCAGTCGCTGCAGGTTGGTACGATTCAAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: FTGTVGTPEAISTRD*AMASRCRLVRFKVA
Trigger: GGCCACCTTGAATCGTACCAACCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGATCGCCTCTGGGGTCCCCACAGTCCCAGTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS GCA 90 bp ATGGTTGTCCCAGTGGGCATGCTGGAGGCTTGTCTCCGGATCACCTaGGATGGGGCGGTCTTCAGTGGGCCTCGAATGGTGCCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: MVVPVGMLEACLRIT*DGAVFSGPRMVPVL
Trigger: CAGCACAGGCACCATTCGAGGCCCACTGAAGACCGCCCCATCGCAGGTGATCCGGAGACAAGCCTCCAGCATGCCCACTGGGACAACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS TCA 90 bp TCTCGCTGTCCGGAAGGTAACAGTGTCGTGGGAAGCCTCGGGCGCTaGAACTCTTCCCAGGATTCGGGTGTTCCGGTCCCTGAATGCCGG +
Preference number: 5 (lower is better)
Translates to: SRCPEGNSVVGSLGR*NSSQDSGVPVPECR
Trigger: CCGGCATTCAGGGACCGGAACACCCGAATCCTGGGAAGAGTTTCAGCGCCCGAGGCTTCCCACGACACTGTTACCTTCCGGACAGCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227451.4
ENST00000527475.1
ENST00000532982.5
CDS GCA 90 bp CCCACACCACGCCCTTCCCAGGGGCCGAGGAGGGGTCGTAGTAGTTaGGGCGAACTGGGCGGAGAGTTCGTAGAGAGCAAATGTGGTTTT +
Preference number: 5 (lower is better)
Translates to: PTPRPSQGPRRGRSS*GELGGEFVESKCGF
Trigger: AAAACCACATTTGCTCTCTACGAACTCTCCGCCCAGTTCGCCGCAACTACTACGACCCCTCCTCGGCCCCTGGGAAGGGCGTGGTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532982.5
CDS-3UTR CAA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATCCGGCGGACGCGGCGTaGGCGCTGGGTCTGACGGTT +
Preference number: 5 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDPADAA*ALGLTV
Trigger: AACCGTCAGACCCAGCGCCAACGCCGCGTCCGCCGG...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCACAGGAGAGCCCATGGTaGTCCCAGTGGGCATGCTGG +
Preference number: 5 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPQESPW*SQWACW
Trigger: CCAGCATGCCCACTGGGACAACCATGGGCTCTCCTG...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp CTCCCTGCTGTAAGTCAATCTATAATAGATGAGGGAGATGAGGGACCCAGCAGCGGCAGTGGGGGTAGCTaGACCACTCCAGGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: LPAVSQSIIDEGDEGPSSGSGGS*TTPGGG
Trigger: GCCGCCTCCTGGAGTGGTCAAGCTACCCCCACTGCC...GCTGCTGGGTCCCTCATCTCCCTCATCTATTATAGATTGACTTACAGCAGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp CACAGGGACAAGGATGGCAGAGCAATTCCTCCCATCAGAGCTCCCTCTGGTGGATGGTGGTCTTGCGGCTaGTGTTGGAAACCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: HRDKDGRAIPPIRAPSGGWWSCG*CWKPLG
Trigger: TCCCAGGGGTTTCCAACACAAGCCGCAAGACCACCA...TCCACCAGAGGGAGCTCTGATGGGAGGAATTGCTCTGCCATCCTTGTCCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCAACCACAGCCTGGCTGTaGGAGCCCCATCAGAACTGG +
Preference number: 5 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPTTAWL*EPHQNW
Trigger: CCAGTTCTGATGGGGCTCCAACAGCCAGGCTGTGGT...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATGGGCATGCTGGAGGCTaGTCTCCGGATCACCTGCGA +
Preference number: 5 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDGHAGG*SPDHLR
Trigger: TCGCAGGTGATCCGGAGACAAGCCTCCAGCATGCCC...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp AGAGAGGGTCTAGAAACAGCATCATGGGATGCCACTCCAAAGAGGAACCCCAGACTTCCGGTCTTGCTGTaGGGTCCTGGGGGACTGGCA +
Preference number: 5 (lower is better)
Translates to: REGLETASWDATPKRNPRLPVLL*GPGGLA
Trigger: TGCCAGTCCCCCAGGACCCAACAGCAAGACCGGAAG...TCTGGGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTTTCTAGACCCTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS CCA 90 bp CAGAACTTTTCTCCCTTTCTCGCTGTCCGGAAGGTAACAGTGTCGTaGGAAGCCTCGGGCGCTGAAACTCTTCCCAGGATTCGGGTGTTC +
Preference number: 5 (lower is better)
Translates to: QNFSPFLAVRKVTVS*EASGAETLPRIRVF
Trigger: GAACACCCGAATCCTGGGAAGAGTTTCAGCGCCCGAGGCTTCCCACGACACTGTTACCTTCCGGACAGCGAGAAAGGGAGAAAAGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227451.4
ENST00000527475.1
ENST00000532982.5
CDS-3UTR CAA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTAAACAGGCCCCCGCCTaGCAAAAGCCACTCGGCGGG +
Preference number: 5 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSKQAPA*QKPLGG
Trigger: CCCGCCGAGTGGCTTTTGCAAGGCGGGGGCCTGTTT...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATCATCTTCCCTGGAGGTaGGGTGCCTGTCTTCACCCC +
Preference number: 5 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDHLPWR*GACLHP
Trigger: GGGGTGAAGACAGGCACCCAACCTCCAGGGAAGATG...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCATGTGGTGCAGTAACCTaGGGACCAGTCTCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPCGAVT*GPVSWS
Trigger: AGACCAGGAGACTGGTCCCAAGGTTACTGCACCACA...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp CATCAGAACTGGGGTTTGGCATCTTGCAAAACAGAGTGCAGGGACATGACGGGCTGGCAGGGCTTGTGGTaGCTTACAGACTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: HQNWGLASCKTECRDMTGWQGLW*LTDSGR
Trigger: CCTCCCTGAGTCTGTAAGCAACCACAAGCCCTGCCA...GCCCGTCATGTCCCTGCACTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTGGAGGCGGCATGTTCTaGCGGGTCACTGGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSGGGMF*RVTGSC
Trigger: ACAGCTGCCAGTGACCCGCAAGAACATGCCGCCTCC...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATCCTGCCAAGGCAGGGTaGACAGGACTGGACCCATTT +
Preference number: 5 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDPAKAG*TGLDPF
Trigger: AAATGGGTCCAGTCCTGTCAACCCTGCCTTGGCAGG...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGGGAAGAAGTGCTTCCTaGCTCTACACCAAGGCATCA +
Preference number: 5 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLGRSAS*LYTKAS
Trigger: TGATGCCTTGGTGTAGAGCAAGGAAGCACTTCTTCC...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp AGAGAGGGTCTAGAAACAGCATCATGGGATGCCACTCCAAAGAGGAACCCCAGATCAGCCCTCACCTCATaGCATCTCCCCAGGCACAGT +
Preference number: 5 (lower is better)
Translates to: REGLETASWDATPKRNPRSALTS*HLPRHS
Trigger: ACTGTGCCTGGGGAGATGCAATGAGGTGAGGGCTGA...TCTGGGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTTTCTAGACCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATCAGCCCTCGCACCAGTaGCGCCTCGGCCTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDQPSHQ*RLGLCR
Trigger: TCTGCAGAGGCCGAGGCGCAACTGGTGCGAGGGCTG...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTGGCCCAGTGCTGCCATaGACCACGGCTGCCTTAACA +
Preference number: 5 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSGPVLP*TTAALT
Trigger: TGTTAAGGCAGCCGTGGTCAATGGCAGCACTGGGCC...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp CATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATAATGATCCGGATGGTTTaGCAGTCTGGGTGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: HLPRHSSVFIGVSVHYGIMIRMV*QSGWPG
Trigger: GCCTGGCCACCCAGACTGCAAAACCATCCGGATCAT...TATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCGAGAGTTCCCGTGTCTaGGCGGAACTGGTTCATGGA +
Preference number: 5 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTESSRV*AELVHG
Trigger: TCCATGAACCAGTTCCGCCAAGACACGGGAACTCTC...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCATCCTTGTTCCCATTGTaGTACATGGCAACCAAGCAG +
Preference number: 5 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPSLFPL*YMATKQ
Trigger: CTGCTTGGTTGCCATGTACAACAATGGGAACAAGGA...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp AGGCTCAGCACCAGCACATCCACAGAACTGGGTGACAGGCAGGTGAATCGACTGAAATGGTCTTGCAGGTaGGACACTGCAAACTTCCAT +
Preference number: 5 (lower is better)
Translates to: RLSTSTSTELGDRQVNRLKWSCR*DTANFH
Trigger: ATGGAAGTTTGCAGTGTCCAACCTGCAAGACCATTT...CAGTCGATTCACCTGCCTGTCACCCAGTTCTGTGGATGTGCTGGTGCTGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATGAGCCAAACTCTGTCTaGTGGTGGACCTCATTCCAG +
Preference number: 5 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDEPNSV*WWTSFQ
Trigger: CTGGAATGAGGTCCACCACAAGACAGAGTTTGGCTC...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp AGAGAGGGTCTAGAAACAGCATCATGGGATGCCACTCCAAAGAGGAACCCCAGAGGAGGAGATAGGGTCTaGGGACACAACAAGATGCAG +
Preference number: 5 (lower is better)
Translates to: REGLETASWDATPKRNPRGGDRV*GHNKMQ
Trigger: CTGCATCTTGTTGTGTCCCAAGACCCTATCTCCTCC...TCTGGGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTTTCTAGACCCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp AGAGAGGGTCTAGAAACAGCATCATGGGATGCCACTCCAAAGAGGAACCCCAGACCTATTTCTGCATCCTaGCGGCCAAGAAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: REGLETASWDATPKRNPRPISAS*RPRSSA
Trigger: TGCTGAGCTTCTTGGCCGCAAGGATGCAGAAATAGG...TCTGGGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTTTCTAGACCCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp CATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATAACCCAGTGGCAGGGCTaGTGGTTGCTTACAGACTCA +
Preference number: 5 (lower is better)
Translates to: HLPRHSSVFIGVSVHYGITQWQG*WLLTDS
Trigger: TGAGTCTGTAAGCAACCACAAGCCCTGCCACTGGGT...TATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp ATCTTGCAAAACAGAGTGCAGGGACATGACGGGCCTTCCCTTCAAGCTGGCCCATGGCTTTATGAAAGATaGGCCTCCAGTTCCCATCTA +
Preference number: 5 (lower is better)
Translates to: ILQNRVQGHDGPSLQAGPWLYER*ASSSHL
Trigger: TAGATGGGAACTGGAGGCCAATCTTTCATAAAGCCA...TGGGCCAGCTTGAAGGGAAGGCCCGTCATGTCCCTGCACTCTGTTTTGCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp AGAGAGGGTCTAGAAACAGCATCATGGGATGCCACTCCAAAGAGGAACCCCAGAAACTATGGCAGGAAATaGCCCTGTGGTGCAGTAACC +
Preference number: 5 (lower is better)
Translates to: REGLETASWDATPKRNPRNYGRK*PCGAVT
Trigger: GGTTACTGCACCACAGGGCAATTTCCTGCCATAGTT...TCTGGGGTTCCTCTTTGGAGTGGCATCCCATGATGCTGTTTCTAGACCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp CATCTCCCTTTGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTGGCCACCCTTCCGGTCTaGCTGTTGGGTCCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: HLPLCWMRFMNDVAIFSLATLPV*LLGPGG
Trigger: TCCCCCAGGACCCAACAGCAAGACCGGAAGGGTGGC...CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTTCACTACGGGATAGGTaGGCAACAGGTGAGGAACGT +
Preference number: 5 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSSLRDR*ATGEER
Trigger: ACGTTCCTCACCTGTTGCCAACCTATCCCGTAGTGA...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp CCTCACCTCATTGCATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTCCAACTTCTTCTACATaGACTCACTCTCCTCACTTC +
Preference number: 5 (lower is better)
Translates to: PHLIASPQAQFCLHWGFSPTSST*THSPHF
Trigger: GAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGG...ACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATGCAATGAGGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp CATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATACATCAGAACTGGGGTTaGGCATCTTGCAAAACAGAG +
Preference number: 5 (lower is better)
Translates to: HLPRHSSVFIGVSVHYGIHQNWG*ASCKTE
Trigger: CTCTGTTTTGCAAGATGCCAAACCCCAGTTCTGATG...TATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp CATCTCCCTTTGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTGGCCAGTCGCTGCAGGTaGGTACGATTCAAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: HLPLCWMRFMNDVAIFSLASRCR*VRFKVA
Trigger: GGCCACCTTGAATCGTACCAACCTGCAGCGACTGGC...CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp GACACCAACTTCTTCTACATTGACTCACTCTCCTCACTTCCTGTCCTGCAGTCTCCATCCTTGTTCCCATaGTTGTACATGGCAACCAAG +
Preference number: 5 (lower is better)
Translates to: DTNFFYIDSLSSLPVLQSPSLFP*LYMATK
Trigger: CTTGGTTGCCATGTACAACAATGGGAACAAGGATGG...AGACTGCAGGACAGGAAGTGAGGAGAGTGAGTCAATGTAGAAGAAGTTGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp ATGATGTCGCTATATTCAGTCTGGCTCCCACTGTGGTTGGGAGGGATGAGGGATTCATCCCATCTCCCTTaGTGTTGGATGAGATTTATG +
Preference number: 5 (lower is better)
Translates to: MMSLYSVWLPLWLGGMRDSSHLP*CWMRFM
Trigger: CATAAATCTCATCCAACACAAAGGGAGATGGGATGA...ATCCCTCATCCCTCCCAACCACAGTGGGAGCCAGACTGAATATAGCGACATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp CATCTCCCCAGGCACAGTTCTGTCTTCATTGGGGTTTCAGTTCACTACGGGATAACAGTTCTGTCTTCATaGGGGTTTCAGTTCACTACG +
Preference number: 5 (lower is better)
Translates to: HLPRHSSVFIGVSVHYGITVLSS*GFQFTT
Trigger: CGTAGTGAACTGAAACCCCAATGAAGACAGAACTGT...TATCCCGTAGTGAACTGAAACCCCAATGAAGACAGAACTGTGCCTGGGGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp CTTGTACCAGTGAGCCTTCCCCCAGTTTTCTCATGCACACAACAGTGCAATACCTGCAAACTTCCATCCTaGTTCCCATTGTTGTACATG +
Preference number: 5 (lower is better)
Translates to: LVPVSLPPVFSCTQQCNTCKLPS*FPLLYM
Trigger: CATGTACAACAATGGGAACAAGGATGGAAGTTTGCA...GGTATTGCACTGTTGTGTGCATGAGAAAACTGGGGGAAGGCTCACTGGTACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp CATCTCCCTTTGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTGGTCTTGCGGCTTGTGTaGGAAACCCCTGGGATGGAT +
Preference number: 5 (lower is better)
Translates to: HLPLCWMRFMNDVAIFSLVLRLV*ETPGMD
Trigger: ATCCATCCCAGGGGTTTCCAACACAAGCCGCAAGAC...CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp CATCTCCCTTTGTGTTGGATGAGATTTATGAATGATGTCGCTATATTCAGTCTGCCTTCTCCGACCCTCTaGGGAAGAAGTGCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: HLPLCWMRFMNDVAIFSLPSPTL*GRSASL
Trigger: CAAGGAAGCACTTCTTCCCAAGAGGGTCGGAGAAGG...CAGACTGAATATAGCGACATCATTCATAAATCTCATCCAACACAAAGGGAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS-3UTR CAA 90 bp CACATAGTTCAAAGAACCCACTTTCAAAGGGGGAATTGGGTTTCCCTTCTTGATGATGCAGGCTCTGGTTaGATCAGAGAGGGTCTAGAA +
Preference number: 5 (lower is better)
Translates to: HIVQRTHFQRGNWVSLLDDAGSG*IREGLE
Trigger: TTCTAGACCCTCTCTGATCAAACCAGAGCCTGCATC...ATCAAGAAGGGAAACCCAATTCCCCCTTTGAAAGTGGGTTCTTTGAACTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS GCA 72 bp GGACCGCGCGCCGCCGCCGCCGCCGGGGTCCGCTGCTaGTGCCGCTGCTCTGTGGGGTCGAGTCGCTTCATG +
Preference number: 6 (lower is better)
Translates to: GPRAAAAAGVRC*CRCSVGSSRFM
Trigger: CATGAAGCGACTCGACCCCACAGAGCAGCGGCAGCAGCAGCGGACCCCGGCGGCGGCGGCGGCGCGCGGTCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS GCA 72 bp AGGACCCAGCCCTCGCACCAGTTGCGCCTCGGCCTCTaGAGACGCCGGGGTGGGATCTCGCCGCACGGCCGC +
Preference number: 6 (lower is better)
Translates to: RTQPSHQLRLGL*RRRGGISPHGR
Trigger: GCGGCCGTGCGGCGAGATCCCACCCCGGCGTCTGCAGAGGCCGAGGCGCAACTGGTGCGAGGGCTGGGTCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS CAA 90 bp CGAGCTGGGGCTGACGGCGAGGCAAGGACCCAGCCCTCGCACCAGTaGCGCCTCGGCCTCTGCAGACGCCGGGGTGGGATCTCGCCGCAC +
Preference number: 6 (lower is better)
Translates to: RAGADGEARTQPSHQ*RLGLCRRRGGISPH
Trigger: GTGCGGCGAGATCCCACCCCGGCGTCTGCAGAGGCCGAGGCGCAACTGGTGCGAGGGCTGGGTCCTTGCCTCGCCGTCAGCCCCAGCTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS GCA 72 bp GCAAATGCCCGGCTCTCTGCAAACAGGCCCCCGCCTTaGAAAAGCCACTCGGCGGGCGCGCGGCCCGAGCCC +
Preference number: 6 (lower is better)
Translates to: ANARLSANRPPP*KSHSAGARPEP
Trigger: GGGCTCGGGCCGCGCGCCCGCCGAGTGGCTTTTGCAAGGCGGGGGCCTGTTTGCAGAGAGCCGGGCATTTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS CCA 72 bp GGCGCGGACCACCGCCTCGATGTGGTGGCTCACCGCTaGGCTGTAGGGACGCCAGCGGCCGTGCTCGTTCAG +
Preference number: 6 (lower is better)
Translates to: GADHRLDVVAHR*AVGTPAAVLVQ
Trigger: CTGAACGAGCACGGCCGCTGGCGTCCCTACAGCCCAGCGGTGAGCCACCACATCGAGGCGGTGGTCCGCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS CAA 72 bp GCTGACGGCGAGGCAAGGACCCAGCCCTCGCACCAGTaGCGCCTCGGCCTCTGCAGACGCCGGGGTGGGATC +
Preference number: 6 (lower is better)
Translates to: ADGEARTQPSHQ*RLGLCRRRGGI
Trigger: GATCCCACCCCGGCGTCTGCAGAGGCCGAGGCGCAACTGGTGCGAGGGCTGGGTCCTTGCCTCGCCGTCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS CAA 72 bp TGCAAATGCCCGGCTCTCTGCAAACAGGCCCCCGCCTaGCAAAAGCCACTCGGCGGGCGCGCGGCCCGAGCC +
Preference number: 6 (lower is better)
Translates to: CKCPALCKQAPA*QKPLGGRAARA
Trigger: GGCTCGGGCCGCGCGCCCGCCGAGTGGCTTTTGCAAGGCGGGGGCCTGTTTGCAGAGAGCCGGGCATTTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS CAA 72 bp GGGGTAGATGAGGTCGAGGCGCCGGCGGACGCGGCGTaGGCGCTGGGTCTGACGGTTGATCTGGCCCATGGT +
Preference number: 6 (lower is better)
Translates to: GVDEVEAPADAA*ALGLTVDLAHG
Trigger: ACCATGGGCCAGATCAACCGTCAGACCCAGCGCCAACGCCGCGTCCGCCGGCGCCTCGACCTCATCTACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS GCA 72 bp CGCCCTTCCCAGGGGCCGAGGAGGGGTCGTAGTAGTTaGGGCGAACTGGGCGGAGAGTTCCCGTGTCTTGGC +
Preference number: 6 (lower is better)
Translates to: RPSQGPRRGRSS*GELGGEFPCLG
Trigger: GCCAAGACACGGGAACTCTCCGCCCAGTTCGCCGCAACTACTACGACCCCTCCTCGGCCCCTGGGAAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS GCA 72 bp GCTGCTGCCGCTGCTCTGTGGGGTCGAGTCGCTTCATaGAAATGCCCGGCTCTCTGCAAACAGGCCCCCGCC +
Preference number: 6 (lower is better)
Translates to: AAAAALWGRVAS*KCPALCKQAPA
Trigger: GGCGGGGGCCTGTTTGCAGAGAGCCGGGCATTTGCATGAAGCGACTCGACCCCACAGAGCAGCGGCAGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS GCA 72 bp CCTGCGATGGGGCGGTCTTCAGTGGGCCTCGAATGGTaGCTGTGCTGTCCAGTGGCTTGGCCCCAGAGCCTG +
Preference number: 6 (lower is better)
Translates to: PAMGRSSVGLEW*LCCPVAWPQSL
Trigger: CAGGCTCTGGGGCCAAGCCACTGGACAGCACAGGCACCATTCGAGGCCCACTGAAGACCGCCCCATCGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CCA 72 bp GGCCAGGGCCACCCTTCCGGTCTTGCTGTTGGGTCCTaGGGGACTGGCAGGAGAGCCCATGGTTGTCCCAGT +
Preference number: 6 (lower is better)
Translates to: GQGHPSGLAVGS*GTGRRAHGCPS
Trigger: ACTGGGACAACCATGGGCTCTCCTGCCAGTCCCCCAGGACCCAACAGCAAGACCGGAAGGGTGGCCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CCA 72 bp GCACCCGGGACTGGGCAATGGCCAGTCGCTGCAGGTTaGTACGATTCAAGGTGGCCAGGGCCACCCTTCCGG +
Preference number: 6 (lower is better)
Translates to: APGTGQWPVAAG*YDSRWPGPPFR
Trigger: CCGGAAGGGTGGCCCTGGCCACCTTGAATCGTACCAACCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CAA 90 bp GTGCTGTCCAGTGGCTTGGCCCCAGAGCCTGGCAGTGGGGGTAGCTaGACCACTCCAGGAGGCGGCATGTTCTTGCGGGTCACTGGCAGC +
Preference number: 6 (lower is better)
Translates to: VLSSGLAPEPGSGGS*TTPGGGMFLRVTGS
Trigger: GCTGCCAGTGACCCGCAAGAACATGCCGCCTCCTGGAGTGGTCAAGCTACCCCCACTGCCAGGCTCTGGGGCCAAGCCACTGGACAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS TCA 72 bp GTGGCTTGGCCCCAGAGCCTGGCAGTGGGGGTAGCTTaGCCACTCCAGGAGGCGGCATGTTCTTGCGGGTCA +
Preference number: 6 (lower is better)
Translates to: VAWPQSLAVGVA*PLQEAACSCGS
Trigger: TGACCCGCAAGAACATGCCGCCTCCTGGAGTGGTCAAGCTACCCCCACTGCCAGGCTCTGGGGCCAAGCCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS GCA 72 bp ATGGGGCGGTCTTCAGTGGGCCTCGAATGGTGCCTGTaGTGTCCAGTGGCTTGGCCCCAGAGCCTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: MGRSSVGLEWCL*CPVAWPQSLAV
Trigger: CACTGCCAGGCTCTGGGGCCAAGCCACTGGACAGCACAGGCACCATTCGAGGCCCACTGAAGACCGCCCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS GCA 72 bp GCGATCAGCACCCGGGACTGGGCAATGGCCAGTCGCTaGAGGTTGGTACGATTCAAGGTGGCCAGGGCCACC +
Preference number: 6 (lower is better)
Translates to: AISTRDWAMASR*RLVRFKVARAT
Trigger: GGTGGCCCTGGCCACCTTGAATCGTACCAACCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGATCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CCA 72 bp TGGCAGGAGAGCCCATGGTTGTCCCAGTGGGCATGCTaGAGGCTTGTCTCCGGATCACCTGCGATGGGGCGG +
Preference number: 6 (lower is better)
Translates to: WQESPWLSQWAC*RLVSGSPAMGR
Trigger: CCGCCCCATCGCAGGTGATCCGGAGACAAGCCTCCAGCATGCCCACTGGGACAACCATGGGCTCTCCTGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CCA 72 bp CTGGGGGACTGGCAGGAGAGCCCATGGTTGTCCCAGTaGGCATGCTGGAGGCTTGTCTCCGGATCACCTGCG +
Preference number: 6 (lower is better)
Translates to: LGDWQESPWLSQ*ACWRLVSGSPA
Trigger: CGCAGGTGATCCGGAGACAAGCCTCCAGCATGCCCACTGGGACAACCATGGGCTCTCCTGCCAGTCCCCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CAA 72 bp GGGGGTAGCTTGACCACTCCAGGAGGCGGCATGTTCTaGCGGGTCACTGGCAGCTGTAGGGGCCCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: GGSLTTPGGGMF*RVTGSCRGPVL
Trigger: CAGCACTGGGCCCCTACAGCTGCCAGTGACCCGCAAGAACATGCCGCCTCCTGGAGTGGTCAAGCTACCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CAA 72 bp AGCACCCGGGACTGGGCAATGGCCAGTCGCTGCAGGTaGGTACGATTCAAGGTGGCCAGGGCCACCCTTCCG +
Preference number: 6 (lower is better)
Translates to: STRDWAMASRCR*VRFKVARATLP
Trigger: CGGAAGGGTGGCCCTGGCCACCTTGAATCGTACCAACCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CAA 90 bp TGTGACCATGGGGTAGATGAGGTCGAGGCGCCGGCGGACGCGGCGTaGGCGCTGGGTCTGACGGTTGATCTGGCCCATGGTGTTGAAGTC +
Preference number: 6 (lower is better)
Translates to: CDHGVDEVEAPADAA*ALGLTVDLAHGVEV
Trigger: GACTTCAACACCATGGGCCAGATCAACCGTCAGACCCAGCGCCAACGCCGCGTCCGCCGGCGCCTCGACCTCATCTACCCCATGGTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CAA 90 bp CCTGGCAGTGGGGGTAGCTTGACCACTCCAGGAGGCGGCATGTTCTaGCGGGTCACTGGCAGCTGTAGGGGCCCAGTGCTGCCATTGACC +
Preference number: 6 (lower is better)
Translates to: PGSGGSLTTPGGGMF*RVTGSCRGPVLPLT
Trigger: GGTCAATGGCAGCACTGGGCCCCTACAGCTGCCAGTGACCCGCAAGAACATGCCGCCTCCTGGAGTGGTCAAGCTACCCCCACTGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CAA 90 bp ACTGGCAGGAGAGCCCATGGTTGTCCCAGTGGGCATGCTGGAGGCTaGTCTCCGGATCACCTGCGATGGGGCGGTCTTCAGTGGGCCTCG +
Preference number: 6 (lower is better)
Translates to: TGRRAHGCPSGHAGG*SPDHLRWGGLQWAS
Trigger: CGAGGCCCACTGAAGACCGCCCCATCGCAGGTGATCCGGAGACAAGCCTCCAGCATGCCCACTGGGACAACCATGGGCTCTCCTGCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CAA 90 bp GAGGCGATCAGCACCCGGGACTGGGCAATGGCCAGTCGCTGCAGGTaGGTACGATTCAAGGTGGCCAGGGCCACCCTTCCGGTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: EAISTRDWAMASRCR*VRFKVARATLPVLL
Trigger: CAGCAAGACCGGAAGGGTGGCCCTGGCCACCTTGAATCGTACCAACCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGATCGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS GCA 72 bp GCCGCTGCTCTGTGGGGTCGAGTCGCTTCATGCAAATaGCCGGCTCTCTGCAAACAGGCCCCCGCCTTGCAA +
Preference number: 6 (lower is better)
Translates to: AAALWGRVASCK*PALCKQAPALQ
Trigger: TTGCAAGGCGGGGGCCTGTTTGCAGAGAGCCGGGCATTTGCATGAAGCGACTCGACCCCACAGAGCAGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227451.4
CDS GCA 72 bp CCAGTGGGCATGCTGGAGGCTTGTCTCCGGATCACCTaGGATGGGGCGGTCTTCAGTGGGCCTCGAATGGTG +
Preference number: 6 (lower is better)
Translates to: PVGMLEACLRIT*DGAVFSGPRMV
Trigger: CACCATTCGAGGCCCACTGAAGACCGCCCCATCGCAGGTGATCCGGAGACAAGCCTCCAGCATGCCCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS GCA 72 bp GACTGGCAGGAGAGCCCATGGTTGTCCCAGTGGGCATaGTGGAGGCTTGTCTCCGGATCACCTGCGATGGGG +
Preference number: 6 (lower is better)
Translates to: DWQESPWLSQWA*WRLVSGSPAMG
Trigger: CCCCATCGCAGGTGATCCGGAGACAAGCCTCCAGCATGCCCACTGGGACAACCATGGGCTCTCCTGCCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS GCA 72 bp CGCCCTTCCCAGGGGCCGAGGAGGGGTCGTAGTAGTTaGGGCGAACTGGGCGGAGAGTTCGTAGAGAGCAAA +
Preference number: 6 (lower is better)
Translates to: RPSQGPRRGRSS*GELGGEFVESK
Trigger: TTTGCTCTCTACGAACTCTCCGCCCAGTTCGCCGCAACTACTACGACCCCTCCTCGGCCCCTGGGAAGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532982.5
CDS CCA 72 bp GGGCATGCTGGAGGCTTGTCTCCGGATCACCTGCGATaGGGCGGTCTTCAGTGGGCCTCGAATGGTGCCTGT +
Preference number: 6 (lower is better)
Translates to: GHAGGLSPDHLR*GGLQWASNGAC
Trigger: ACAGGCACCATTCGAGGCCCACTGAAGACCGCCCCATCGCAGGTGATCCGGAGACAAGCCTCCAGCATGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CCA 72 bp ACTGTGGGGACCCCAGAGGCGATCAGCACCCGGGACTaGGCAATGGCCAGTCGCTGCAGGTTGGTACGATTC +
Preference number: 6 (lower is better)
Translates to: TVGTPEAISTRD*AMASRCRLVRF
Trigger: GAATCGTACCAACCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGATCGCCTCTGGGGTCCCCACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CAA 72 bp TTCAAGGTGGCCAGGGCCACCCTTCCGGTCTTGCTGTaGGGTCCTGGGGGACTGGCAGGAGAGCCCATGGTT +
Preference number: 6 (lower is better)
Translates to: FKVARATLPVLL*GPGGLAGEPMV
Trigger: AACCATGGGCTCTCCTGCCAGTCCCCCAGGACCCAACAGCAAGACCGGAAGGGTGGCCCTGGCCACCTTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CAA 90 bp TTGGTACGATTCAAGGTGGCCAGGGCCACCCTTCCGGTCTTGCTGTaGGGTCCTGGGGGACTGGCAGGAGAGCCCATGGTTGTCCCAGTG +
Preference number: 6 (lower is better)
Translates to: LVRFKVARATLPVLL*GPGGLAGEPMVVPV
Trigger: CACTGGGACAACCATGGGCTCTCCTGCCAGTCCCCCAGGACCCAACAGCAAGACCGGAAGGGTGGCCCTGGCCACCTTGAATCGTACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CAA 72 bp AGAGCCCATGGTTGTCCCAGTGGGCATGCTGGAGGCTaGTCTCCGGATCACCTGCGATGGGGCGGTCTTCAG +
Preference number: 6 (lower is better)
Translates to: RAHGCPSGHAGG*SPDHLRWGGLQ
Trigger: CTGAAGACCGCCCCATCGCAGGTGATCCGGAGACAAGCCTCCAGCATGCCCACTGGGACAACCATGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS TCA 72 bp CCGGAAGGTAACAGTGTCGTGGGAAGCCTCGGGCGCTaGAACTCTTCCCAGGATTCGGGTGTTCCGGTCCCT +
Preference number: 6 (lower is better)
Translates to: PEGNSVVGSLGR*NSSQDSGVPVP
Trigger: AGGGACCGGAACACCCGAATCCTGGGAAGAGTTTCAGCGCCCGAGGCTTCCCACGACACTGTTACCTTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227451.4
ENST00000527475.1
ENST00000532982.5
CDS TCA 72 bp ACTCGCCTGTGGTGCTGGAGGTGCCAATGGCAAAAATaGGGCGGCGATCCCAGGCCACGAGCAGCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: TRLWCWRCQWQK*GGDPRPRAAAS
Trigger: TGAAGCTGCTGCTCGTGGCCTGGGATCGCCGCCTCATTTTTGCCATTGGCACCTCCAGCACCACAGGCGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227451.4
ENST00000527475.1
ENST00000532982.5
CDS GCA 72 bp CTTTGGTGGCCTGGTGAGACACACAGGCAGCCCCGCTaGACTCATGAGGATCCCAGTGATTCCTGCCAAGGC +
Preference number: 6 (lower is better)
Translates to: LWWPGETHRQPR*THEDPSDSCQG
Trigger: GCCTTGGCAGGAATCACTGGGATCCTCATGAGTGCAGCGGGGCTGCCTGTGTGTCTCACCAGGCCACCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227451.4
ENST00000531902.1
ENST00000532982.5
CDS CAA 72 bp CGGGTCACTGGCAGCTGTAGGGGCCCAGTGCTGCCATaGACCACGGCTGCCTTAACACTCATCACCAAGACA +
Preference number: 6 (lower is better)
Translates to: RVTGSCRGPVLP*TTAALTLITKT
Trigger: TGTCTTGGTGATGAGTGTTAAGGCAGCCGTGGTCAATGGCAGCACTGGGCCCCTACAGCTGCCAGTGACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CAA 90 bp ATGTTCTTGCGGGTCACTGGCAGCTGTAGGGGCCCAGTGCTGCCATaGACCACGGCTGCCTTAACACTCATCACCAAGACACACTGGGGA +
Preference number: 6 (lower is better)
Translates to: MFLRVTGSCRGPVLP*TTAALTLITKTHWG
Trigger: TCCCCAGTGTGTCTTGGTGATGAGTGTTAAGGCAGCCGTGGTCAATGGCAGCACTGGGCCCCTACAGCTGCCAGTGACCCGCAAGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5
CDS CCA 72 bp TCTCCCTTTCTCGCTGTCCGGAAGGTAACAGTGTCGTaGGAAGCCTCGGGCGCTGAAACTCTTCCCAGGATT +
Preference number: 6 (lower is better)
Translates to: SPFLAVRKVTVS*EASGAETLPRI
Trigger: AATCCTGGGAAGAGTTTCAGCGCCCGAGGCTTCCCACGACACTGTTACCTTCCGGACAGCGAGAAAGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227451.4
ENST00000527475.1
ENST00000532982.5
CDS CCA 72 bp ACTGCAAACTTCCATCCTTGTTCCCATTGTTGTACATaGCAACCAAGCAGTAGATGTGGTAGACGTGGCCGC +
Preference number: 6 (lower is better)
Translates to: TANFHPCSHCCT*QPSSRCGRRGR
Trigger: GCGGCCACGTCTACCACATCTACTGCTTGGTTGCCATGTACAACAATGGGAACAAGGATGGAAGTTTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227451.4
ENST00000532982.5