RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DTWD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000104047

Ensembl transcript IDs: ENST00000251250.7, ENST00000403028.8, ENST00000557968.5, ENST00000557988.5, ENST00000558653.5, ENST00000559223.5, ENST00000559405.5, ENST00000560735.5, ENST00000561188.5

Found 746 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCTCAGCCTCTGCTACCACCTCTGCTGCTCCTGGTGGTTTATCTaGTATAATTCAGACCCACATTCCTTGAGAGGCCTGAGTTCCAGG +
Preference number: 1 (lower is better)
Translates to: SLSLCYHLCCSWWFI*YNSDPHSLRGLSSR
Trigger: CCTGGAACTCAGGCCTCTCAAGGAATGTGGGTCTGAATTATACCAGATAAACCACCAGGAGCAGCAGAGGTGGTAGCAGAGGCTGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 90 bp CAGTGTCCTTCTGCAGTTGAAGCAGACTCTGAAGGAGCTGACAGTTaGAGGCTGCTGACCTCATTCCTTGCAACTGGGAGGTCAGTCCTT +
Preference number: 1 (lower is better)
Translates to: QCPSAVEADSEGADS*RLLTSFLATGRSVL
Trigger: AAGGACTGACCTCCCAGTTGCAAGGAATGAGGTCAGCAGCCTCCAACTGTCAGCTCCTTCAGAGTCTGCTTCAACTGCAGAAGGACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 90 bp AGTGAGGGTGACCAGGGCAACCTGGCTCTGTTCCATGGAGTCTCATaGTCCAGCAGGCTAACTCAGCCATGCATATTCTTATGTCAACAG +
Preference number: 1 (lower is better)
Translates to: SEGDQGNLALFHGVS*SSRLTQPCIFLCQQ
Trigger: CTGTTGACATAAGAATATGCATGGCTGAGTTAGCCTGCTGGAGCATGAGACTCCATGGAACAGAGCCAGGTTGCCCTGGTCACCCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 90 bp CTGCAGTTGAAGCAGACTCTGAAGGAGCTGACAGTTGGAGGCTGCTaGCCTCATTCCTTGCAACTGGGAGGTCAGTCCTTTCTTAAAGTG +
Preference number: 1 (lower is better)
Translates to: LQLKQTLKELTVGGC*PHSLQLGGQSFLKV
Trigger: CACTTTAAGAAAGGACTGACCTCCCAGTTGCAAGGAATGAGGTCAGCAGCCTCCAACTGTCAGCTCCTTCAGAGTCTGCTTCAACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 90 bp CCACAGTGGACATTCCATTCATGTGCCCACTGTGCTAGCACTGGGTaGCGAATAACTGAAGCAGGAAGGATGACGTCAACTAGGCAATGT +
Preference number: 1 (lower is better)
Translates to: PQWTFHSCAHCASTG*RITEAGRMTSTRQC
Trigger: ACATTGCCTAGTTGACGTCATCCTTCCTGCTTCAGTTATTCGCCACCCAGTGCTAGCACAGTGGGCACATGAATGGAATGTCCACTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 90 bp GATTGTGGTTCAGTTCATCCCTCTGGTAGTGGTTTCCTAATCCATTaGTCTCCTTGCTTCTTGGCTCCTCCCTCTGGGATTTTGGCTCCA +
Preference number: 1 (lower is better)
Translates to: DCGSVHPSGSGFLIH*SPCFLAPPSGILAP
Trigger: TGGAGCCAAAATCCCAGAGGGAGGAGCCAAGAAGCAAGGAGAGCAATGGATTAGGAAACCACTACCAGAGGGATGAACTGAACCACAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 90 bp TACATCAGTCTACTTCTGGCTGAACACTACATCAGAGTTTCCTCATaGCGCTCGGTCTCAGTTGAAACTACCTTCCCTCTCCCTAGGGTC +
Preference number: 1 (lower is better)
Translates to: YISLLLAEHYIRVSS*RSVSVETTFPLPRV
Trigger: GACCCTAGGGAGAGGGAAGGTAGTTTCAACTGAGACCGAGCGTCATGAGGAAACTCTGATGTAGTGTTCAGCCAGAAGTAGACTGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557968.5
3UTR CCA 90 bp TCTCACTGCAGAGTTCAGAGTTATGAAGAGGTGCAAAGTACCATATaGGTCATTAAAAGTGATGGCACGGAGGGGAGGCACCTCTTCTTC +
Preference number: 1 (lower is better)
Translates to: SHCRVQSYEEVQSTI*VIKSDGTEGRHLFF
Trigger: GAAGAAGAGGTGCCTCCCCTCCGTGCCATCACTTTTAATGACCCATATGGTACTTTGCACCTCTTCATAACTCTGAACTCTGCAGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 90 bp CTGCTTTCCTTCGCTGACTTCATTCTAAGTCAGGCTCTTTTCACCTaGCAGCAGAGATGGCCACTAGCAGGTAGGCTTCAATTATTATCA +
Preference number: 1 (lower is better)
Translates to: LLSFADFILSQALFT*QQRWPLAGRLQLLS
Trigger: TGATAATAATTGAAGCCTACCTGCTAGTGGCCATCTCTGCTGCCAGGTGAAAAGAGCCTGACTTAGAATGAAGTCAGCGAAGGAAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 90 bp TTGGAATCAGGTAGGTGTCAGTTAGATGACTCTGCTGATCTTGGCTaGAATCATTCACATATCTTGGGTTTGGCTGGCCATCAGCCAATC +
Preference number: 1 (lower is better)
Translates to: LESGRCQLDDSADLG*NHSHILGLAGHQPI
Trigger: GATTGGCTGATGGCCAGCCAAACCCAAGATATGTGAATGATTCCAGCCAAGATCAGCAGAGTCATCTAACTGACACCTACCTGATTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 90 bp GGAAAGAATCTGTTTCTTTGCTTTTTCCAGCTTCCAGAGGCTGCTTaGGGCTTGTGGTTCCTATCACTCACCTGTAAAGCCAACAATAGC +
Preference number: 1 (lower is better)
Translates to: GKNLFLCFFQLPEAA*GLWFLSLTCKANNS
Trigger: GCTATTGTTGGCTTTACAGGTGAGTGATAGGAACCACAAGCCCCAAGCAGCCTCTGGAAGCTGGAAAAAGCAAAGAAACAGATTCTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 90 bp GCTGACTTCATTCTAAGTCAGGCTCTTTTCACCTGGCAGCAGAGATaGCCACTAGCAGGTAGGCTTCAATTATTATCAGTTCACAATTCC +
Preference number: 1 (lower is better)
Translates to: ADFILSQALFTWQQR*PLAGRLQLLSVHNS
Trigger: GGAATTGTGAACTGATAATAATTGAAGCCTACCTGCTAGTGGCCATCTCTGCTGCCAGGTGAAAAGAGCCTGACTTAGAATGAAGTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 90 bp AACTATCACAGTCTGCCCCCGGCCACAGTTCTTGTCTCACTAACATaGAAAAATGTACTTACTCTGTACCCTAAGAGTCTCACTCCATTA +
Preference number: 1 (lower is better)
Translates to: NYHSLPPATVLVSLT*KNVLTLYPKSLTPL
Trigger: TAATGGAGTGAGACTCTTAGGGTACAGAGTAAGTACATTTTTGCATGTTAGTGAGACAAGAACTGTGGCCGGGGGCAGACTGTGATAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 90 bp AAGTACACTTGCTTGGCCACAGAGTACGCTTCTGGACAGGCAAGATaGAAAACAGTGTCTCTATACAGTCCATCAGAAGAAGAGCAATTT +
Preference number: 1 (lower is better)
Translates to: KYTCLATEYASGQAR*KTVSLYSPSEEEQF
Trigger: AAATTGCTCTTCTTCTGATGGACTGTATAGAGACACTGTTTTTCATCTTGCCTGTCCAGAAGCGTACTCTGTGGCCAAGCAAGTGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 90 bp CAAGTGTCTAGTGATGTTTGGCTCTTATGTATGGGTGGTGATTTTTaGCTGGTGGCCTTCAATGTAGGGTCAGTAAGTGTTTGGTTAAAG +
Preference number: 1 (lower is better)
Translates to: QVSSDVWLLCMGGDF*LVAFNVGSVSVWLK
Trigger: CTTTAACCAAACACTTACTGACCCTACATTGAAGGCCACCAGCCAAAAATCACCACCCATACATAAGAGCCAAACATCACTAGACACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 90 bp GGCACCTCTTCTTCTACTCTCTTTGCATCTACCCCTAGGAATAAATaGGTTCCAAGACCCATTTATTCTTCATATTGGGGCACATGCTAT +
Preference number: 1 (lower is better)
Translates to: GTSSSTLFASTPRNK*VPRPIYSSYWGTCY
Trigger: ATAGCATGTGCCCCAATATGAAGAATAAATGGGTCTTGGAACCCATTTATTCCTAGGGGTAGATGCAAAGAGAGTAGAAGAAGAGGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 90 bp AATGGGAGGCAAATGCAAACTGATAAATTACTGTGTAGCACTTGCTaGTGTTTCATGAAAAGCCATGAAGAGACACTGCCAATCATGTGG +
Preference number: 1 (lower is better)
Translates to: NGRQMQTDKLLCSTC*CFMKSHEETLPIMW
Trigger: CCACATGATTGGCAGTGTCTCTTCATGGCTTTTCATGAAACAGCAGCAAGTGCTACACAGTAATTTATCAGTTTGCATTTGCCTCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 90 bp AAATGCAAACTGATAAATTACTGTGTAGCACTTGCTGCTGTTTCATaGAAAGCCATGAAGAGACACTGCCAATCATGTGGCAAGTACACT +
Preference number: 1 (lower is better)
Translates to: KCKLINYCVALAAVS*KAMKRHCQSCGKYT
Trigger: AGTGTACTTGCCACATGATTGGCAGTGTCTCTTCATGGCTTTTCATGAAACAGCAGCAAGTGCTACACAGTAATTTATCAGTTTGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 90 bp AGGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTaGAATTCATATGTTGAAGCCCTAAACCTCAATGTGCTAGATTTG +
Preference number: 1 (lower is better)
Translates to: RFKFSLSEDLVLSMH*NSYVEALNLNVLDL
Trigger: CAAATCTAGCACATTGAGGTTTAGGGCTTCAACATATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 90 bp AATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACTGGTaGTTCCCATTTGTTGAACCCAACCAAAAGCAAGAGAGCAAAGGA +
Preference number: 1 (lower is better)
Translates to: NNIISFSSQLLISHW*FPFVEPNQKQESKG
Trigger: TCCTTTGCTCTCTTGCTTTTGGTTGGGTTCAACAAATGGGAAGCACCAGTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 90 bp TCCCACACACTGTTCCAAACTAGTGTCCTTGTTATTCCTCAAACATaGCAAGTATACTGCTGCCTCAGTACCTTTGTGTGTATATATATA +
Preference number: 1 (lower is better)
Translates to: SHTLFQTSVLVIPQT*QVYCCLSTFVCIYI
Trigger: TATATATATACACACAAAGGTACTGAGGCAGCAGTATACTTGGCATGTTTGAGGAATAACAAGGACACTAGTTTGGAACAGTGTGTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 90 bp AATTGTGTCTATTTCTATGACAAGGAAATGCTGGTCCTTCCAGTGTaGAAGGGGCCCAATGTAACCAACTTGATATTGAAGAATGGTATT +
Preference number: 1 (lower is better)
Translates to: NCVYFYDKEMLVLPV*KGPNVTNLILKNGI
Trigger: AATACCATTCTTCAATATCAAGTTGGTTACATTGGGCCCCTTCCACACTGGAAGGACCAGCATTTCCTTGTCATAGAAATAGACACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 90 bp TTTGTACAAATGGAAGAAAATGACATGGCTGATAAGCAGAAAGGCTaGGATTTAGATTCAGGTAGTCTAGCTCCAGAGTCTCTGCTTTTA +
Preference number: 1 (lower is better)
Translates to: FVQMEENDMADKQKG*DLDSGSLAPESLLL
Trigger: TAAAAGCAGAGACTCTGGAGCTAGACTACCTGAATCTAAATCTCAGCCTTTCTGCTTATCAGCCATGTCATTTTCTTCCATTTGTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 90 bp TCAGGACTTTTCAGAACCTTTAATATGTTTTGCCTTCTGAATCCCTaGGAGGGAAACAACGTAATGTACAGCAAACTAATTTCACCAAGA +
Preference number: 1 (lower is better)
Translates to: SGLFRTFNMFCLLNP*EGNNVMYSKLISPR
Trigger: TCTTGGTGAAATTAGTTTGCTGTACATTACGTTGTTTCCCTCCCAGGGATTCAGAAGGCAAAACATATTAAAGGTTCTGAAAAGTCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 90 bp ACCCATTTATTCTTCATATTGGGGCACATGCTATATAAGGATAATTaGTCCAGTACATACTCTGTATCTTGGAGTATGGCATCCTATCCT +
Preference number: 1 (lower is better)
Translates to: THLFFILGHMLYKDN*SSTYSVSWSMASYP
Trigger: AGGATAGGATGCCATACTCCAAGATACAGAGTATGTACTGGATCAATTATCCTTATATAGCATGTGCCCCAATATGAAGAATAAATGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 90 bp CTAGAGATATGGATATCTCTAGAAGGATATCCTGGAATTCTAATATaGAGGTTCAGGAGAGTGAAAGTGAAAACTGCCAGACCTTACTTT +
Preference number: 1 (lower is better)
Translates to: LEIWISLEGYPGILI*RFRRVKVKTARPYF
Trigger: AAAGTAAGGTCTGGCAGTTTTCACTTTCACTCTCCTGAACCTTCATATTAGAATTCCAGGATATCCTTCTAGAGATATCCATATCTCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 90 bp ATAATAAAATCAAAGGCTGTAAGATCCTTTGTGAAGACTTTAGAATaGCTTCAAGCTATACCTCATCGGCCCTGTAGGCTAGATAATCTT +
Preference number: 1 (lower is better)
Translates to: IIKSKAVRSFVKTLE*LQAIPHRPCRLDNL
Trigger: AAGATTATCTAGCCTACAGGGCCGATGAGGTATAGCTTGAAGTCATTCTAAAGTCTTCACAAAGGATCTTACAGCCTTTGATTTTATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 90 bp TATGCAACCAAAGAAGCCCTCTTTCTACAGAGCATTAGTGGCACTTaGCCATTCAATTCTGTTATTCTTAAATTTACTATTTCCTTCATG +
Preference number: 1 (lower is better)
Translates to: YATKEALFLQSISGT*PFNSVILKFTISFM
Trigger: CATGAAGGAAATAGTAAATTTAAGAATAACAGAATTGAATGGCCAAGTGCCACTAATGCTCTGTAGAAAGAGGGCTTCTTTGGTTGCATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 90 bp AATAAATGGGTTCCAAGACCCATTTATTCTTCATATTGGGGCACATaGTATATAAGGATAATTGATCCAGTACATACTCTGTATCTTGGA +
Preference number: 1 (lower is better)
Translates to: NKWVPRPIYSSYWGT*YIRIIDPVHTLYLG
Trigger: TCCAAGATACAGAGTATGTACTGGATCAATTATCCTTATATAGCATGTGCCCCAATATGAAGAATAAATGGGTCTTGGAACCCATTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 90 bp TGGCTGAACACTACATCAGAGTTTCCTCATGACGCTCGGTCTCAGTaGAAACTACCTTCCCTCTCCCTAGGGTCTCTGAGCACCACATCA +
Preference number: 2 (lower is better)
Translates to: WLNTTSEFPHDARSQ*KLPSLSLGSLSTTS
Trigger: TGATGTGGTGCTCAGAGACCCTAGGGAGAGGGAAGGTAGTTTCAACTGAGACCGAGCGTCATGAGGAAACTCTGATGTAGTGTTCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557968.5
3UTR-3UTR GCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGCTGAGATCGCACCACTaGACTGCAGCCTGGGAGACA +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLLRSHH*TAAWET
Trigger: TGTCTCCCAGGCTGCAGTGCAGTGGTGCGATCTCAG...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 90 bp ACTCTACCCTCTGAAGAGAGGAGTCCAAGGAAGGGAAGGAATTGTTaGAGGGACATCTTCAAAAACTATCACAGTCTGCCCCCGGCCACA +
Preference number: 2 (lower is better)
Translates to: TLPSEERSPRKGRNC*RDIFKNYHSLPPAT
Trigger: TGTGGCCGGGGGCAGACTGTGATAGTTTTTGAAGATGTCCCTCAAACAATTCCTTCCCTTCCTTGGACTCCTCTCTTCAGAGGGTAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACTCCCAGGTTCTAAGTaGTTCTCCTGCTTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPLPGSK*FSCFSL
Trigger: GAGGCTGAAGCAGGAGAATCACTTAGAACCTGGGAG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATACTGAGATCGCACCACTaGACTGCAGCCTGGGAGACA +
Preference number: 2 (lower is better)
Translates to: LFRDSSVLNALWWALHVILRSHH*TAAWET
Trigger: TGTCTCCCAGGCTGCAGTGCAGTGGTGCGATCTCAG...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAGAAGGAGCTGACAGTTaGAGGCTGCTGACCTCATTC +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPEGADS*RLLTSF
Trigger: GAATGAGGTCAGCAGCCTCCAACTGTCAGCTCCTTC...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTCTCAGGCGATCCACCTaGCTTGGCCTCCTAAAGTGC +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSLRRST*LGLLKC
Trigger: GCACTTTAGGAGGCCAAGGCAGGTGGATCGCCTGAG...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAACAAATTACAGTGCTTaGTGCTGCAGTGGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPTNYSA*CCSGAW
Trigger: CCAAGCCCCACTGCAGCAGCAAGCACTGTAATTTGT...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAGCAAGTACACTTGCTTaGCCACAGAGTACGCTTCTG +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPASTLA*PQSTLL
Trigger: CAGAAGCGTACTCTGTGGCCAAGCAAGTGTACTTGC...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATACACTGCACTGCAGCCTaGGAGACAAGAGTGAGACTC +
Preference number: 2 (lower is better)
Translates to: LFRDSSVLNALWWALHVIHCTAA*ETRVRL
Trigger: GAGTCTCACTCTTGTCTCCCAGGCTGCAGTGCAGTG...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 90 bp AGCCATGGGCTTTTGTTCCATGTGCCACATGTGATGGGATTCTCATaGGCAGCTCAGATCACTCCTACTAACAATTACCACAGGTCGAGT +
Preference number: 2 (lower is better)
Translates to: SHGLLFHVPHVMGFS*AAQITPTNNYHRSS
Trigger: ACTCGACCTGTGGTAATTGTTAGTAGGAGTGATCTGAGCTGCCAATGAGAATCCCATCACATGTGGCACATGGAACAAAAGCCCATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 90 bp CATCCCTCTGGTAGTGGTTTCCTAATCCATTGCTCTCCTTGCTTCTaGGCTCCTCCCTCTGGGATTTTGGCTCCATCTTCCATCTATTTT +
Preference number: 2 (lower is better)
Translates to: HPSGSGFLIHCSPCF*APPSGILAPSSIYF
Trigger: AAAATAGATGGAAGATGGAGCCAAAATCCCAGAGGGAGGAGCCAAGAAGCAAGGAGAGCAATGGATTAGGAAACCACTACCAGAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATCCATGTGCCACATGTaGTGGGATTCTCATTGGCAG +
Preference number: 2 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLSMCHM*WDSHWQ
Trigger: CTGCCAATGAGAATCCCATCACATGTGGCACATGGA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGGGTCATCTTTCTTATaGCAGCTGAGAGATGGAGGC +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLGSSFL*QLRDGG
Trigger: GCCTCCATCTCTCAGCTGGCATAAGAAAGATGACCC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGTTCCATGGAGTCTCATaGTCCAGCAGGCTAACTCAG +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLFHGVS*SSRLTQ
Trigger: CTGAGTTAGCCTGCTGGAGCATGAGACTCCATGGAA...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATCTCAGGCGATCCACCTaGCTTGGCCTCCTAAAGTGC +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHLRRST*LGLLKC
Trigger: GCACTTTAGGAGGCCAAGGCAGGTGGATCGCCTGAG...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACCTTTTATTGGCTGCTaGTCCCTAGACAGACACAAG +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPPFIGC*SLDRHK
Trigger: CTTGTGTCTGTCTAGGGAGCAGCAGCCAATAAAAGG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTACCTGGCAGCAGAGATaGCCACTAGCAGGTAGGCTT +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSTWQQR*PLAGRL
Trigger: AAGCCTACCTGCTAGTGGCCATCTCTGCTGCCAGGT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAGACCCAGAATCACAGTaGGGGGAGTACTTCAAAGGA +
Preference number: 2 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLDPESQ*GEYFKG
Trigger: TCCTTTGAAGTACTCCCCCCACTGTGATTCTGGGTC...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGACCCAGAATCACAGTaGGGGGAGTACTTCAAAGGA +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLDPESQ*GEYFKG
Trigger: TCCTTTGAAGTACTCCCCCCACTGTGATTCTGGGTC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTCACTGCACTGCAGCCTaGGAGACAAGAGTGAGACTC +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSHCTAA*ETRVRL
Trigger: GAGTCTCACTCTTGTCTCCCAGGCTGCAGTGCAGTG...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAGTACTGAATGCTCTCTaGTGGGCACTGCACGTAATA +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPVLNAL*WALHVI
Trigger: TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTAC...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATGTGCTAGCACTGGGTaGCGAATAACTGAAGCAGGA +
Preference number: 2 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLCASTG*RITEAG
Trigger: TCCTGCTTCAGTTATTCGCCACCCAGTGCTAGCACA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 90 bp ATGAAAAGCCATGAAGAGACACTGCCAATCATGTGGCAAGTACACTaGCTTGGCCACAGAGTACGCTTCTGGACAGGCAAGATGAAAAAC +
Preference number: 2 (lower is better)
Translates to: MKSHEETLPIMWQVH*LGHRVRFWTGKMKN
Trigger: GTTTTTCATCTTGCCTGTCCAGAAGCGTACTCTGTGGCCAAGCAAGTGTACTTGCCACATGATTGGCAGTGTCTCTTCATGGCTTTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 90 bp AATCTGTTTCTTTGCTTTTTCCAGCTTCCAGAGGCTGCTTGGGGCTaGTGGTTCCTATCACTCACCTGTAAAGCCAACAATAGCAGGTTG +
Preference number: 2 (lower is better)
Translates to: NLFLCFFQLPEAAWG*WFLSLTCKANNSRL
Trigger: CAACCTGCTATTGTTGGCTTTACAGGTGAGTGATAGGAACCACAAGCCCCAAGCAGCCTCTGGAAGCTGGAAAAAGCAAAGAAACAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAATATGTTTTGCCTTCTaGATCCCTGGGAGGGAAACA +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPICFAF*IPGRET
Trigger: TGTTTCCCTCCCAGGGATTCAGAAGGCAAAACATAT...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGCTTATGTATGGGTGGTaGTTTTTGGCTGGTGGCCTT +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLLMYGW*FLAGGL
Trigger: AAGGCCACCAGCCAAAAATCACCACCCATACATAAG...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAGGCATGATAATTGCTTaGACTTGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLGMIIA*TWEVEV
Trigger: AACCTCCACCTCCCAAGTTCAAGCAATTATCATGCC...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATCCGCGCCTGGCCTGCTaGCTTCTTAATGCTCTCTTT +
Preference number: 2 (lower is better)
Translates to: IFFLALTTSACYSHHLDNPRLAC*LLNALF
Trigger: AAAGAGAGCATTAAGAAGTCAGCAGGCCAGGCGCGG...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATATCCATGTGCCACATGTaGTGGGATTCTCATTGGCAG +
Preference number: 2 (lower is better)
Translates to: LFRDSSVLNALWWALHVISMCHM*WDSHWQ
Trigger: CTGCCAATGAGAATCCCATCACATGTGGCACATGGA...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAAATGGTGATACTGACTaGGGCTCTGCAAAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPNGDTD*GSAKRK
Trigger: TTTCCTCTTTGCAGAGCCTCAGTCAGTATCACCATT...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACTGATATACTGCACTTaGTGGCACATTCTCTTCCGT +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPLIYCT*WHILFR
Trigger: ACGGAAGAGAATGTGCCAGCAAGTGCAGTATATCAG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTCTCTGCTACCACCTCTaGTGCTCCTGGTGGTTTATC +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSLCYHL*CSWWFI
Trigger: GATAAACCACCAGGAGCAGCAGAGGTGGTAGCAGAG...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTTGGGACAAATTACAGTaGTTGCTGCTGCAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSWDKLQ*LLLQWG
Trigger: GCCCCACTGCAGCAGCAAGCACTGTAATTTGTCCCA...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAGGTTTCCTAATCCATTaGTCTCCTTGCTTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPGFLIH*SPCFLA
Trigger: AGCCAAGAAGCAAGGAGAGCAATGGATTAGGAAACC...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATAGGAAGATGGCTGTCTaGAAACCAGGAAGGGAGCGC +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHRKMAV*KPGRER
Trigger: GCGCTCCCTTCCTGGTTTGCAGACAGCCATCTTCCT...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGTGCCTTCTGAATCCCTaGGAGGGAAACAACGTAATG +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLCLLNP*EGNNVM
Trigger: CATTACGTTGTTTCCCTCCCAGGGATTCAGAAGGCA...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACACAGAGTACGCTTCTaGACAGGCAAGATGAAAAAC +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPHRVRF*TGKMKN
Trigger: GTTTTTCATCTTGCCTGTCCAGAAGCGTACTCTGTG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCATCATCCTTTCCACAGTaGACATTCCATTCATGTGCC +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPSSFPQ*TFHSCA
Trigger: GGCACATGAATGGAATGTCCACTGTGGAAAGGATGA...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAATGACAAGGAAATGCTaGTCCTTCCAGTGTGGAAGG +
Preference number: 2 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLMTRKC*SFQCGR
Trigger: CCTTCCACACTGGAAGGACCAGCATTTCCTTGTCAT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 90 bp GTTGAAGCCCTAAACCTCAATGTGCTAGATTTGGAGGTGAGGACTTaGGGAAGTAATTTGGTTCCAAGAAGCCATGAGGTTGAAGACCCT +
Preference number: 2 (lower is better)
Translates to: VEALNLNVLDLEVRT*GSNLVPRSHEVEDP
Trigger: AGGGTCTTCAACCTCATGGCTTCTTGGAACCAAATTACTTCCCAAAGTCCTCACCTCCAAATCTAGCACATTGAGGTTTAGGGCTTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTATCTCTGAATGCAGATaGCCCAGAATCACAGTGGGG +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSISECR*PRITVG
Trigger: CCCCACTGTGATTCTGGGTCATCTGCATTCAGAGAT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTACTTGCTGCTGTTTCATaGAAAGCCATGAAGAGACAC +
Preference number: 2 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLLAAVS*KAMKRH
Trigger: GTGTCTCTTCATGGCTTTTCATGAAACAGCAGCAAG...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAAAAGGCAGGATCACTTaGGGTCAGGAGTTTCAGATA +
Preference number: 2 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLKGRIT*GQEFQI
Trigger: TATCTGAAACTCCTGACCTCAAGTGATCCTGCCTTT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATCTCCCAGGTTCTAAGTaGTTCTCCTGCTTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHLPGSK*FSCFSL
Trigger: GAGGCTGAAGCAGGAGAATCACTTAGAACCTGGGAG...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACATTTCACATCATTCTaGCATCCTCTCATGTATCCG +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPHFTSF*HPLMYP
Trigger: CGGATACATGAGAGGATGTCAGAATGATGTGAAATG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGGTAACTGGGGTAACTaGTTGGGAACAGAAGAGATA +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLGNWGN*LGTEEI
Trigger: TATCTCTTCTGTTCCCAAGCAGTTACCCCAGTTACC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATTGCTACCACCTCTGCTaGTCCTGGTGGTTTATCTGG +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHCYHLC*SWWFIW
Trigger: CCAGATAAACCACCAGGAGCAGCAGAGGTGGTAGCA...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACTTCTAATCTCCCACTaGTGCTTCCCATTTGTTGAA +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPLLISH*CFPFVE
Trigger: TTCAACAAATGGGAAGCACCAGTGGGAGATTAGAAG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGAGAGGAATGCTGAGATaGAGTTTGGGGTGTAAGATG +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLRGMLR*SLGCKM
Trigger: CATCTTACACCCCAAACTCCATCTCAGCATTCCTCT...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 90 bp CTCATTTTACCACTAATAAAAGTTACCACCTTGAGCCATGGGCTTTaGTTCCATGTGCCACATGTGATGGGATTCTCATTGGCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: LILPLIKVTTLSHGL*FHVPHVMGFSLAAQ
Trigger: CTGAGCTGCCAATGAGAATCCCATCACATGTGGCACATGGAACAAAAGCCCATGGCTCAAGGTGGTAACTTTTATTAGTGGTAAAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTTCTGCTTTCCTTCGCTaGCTTCATTCTAAGTCAGGC +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSSAFLR*LHSKSG
Trigger: GCCTGACTTAGAATGAAGTCAGCGAAGGAAAGCAGA...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATATCTCTGAATGCAGATaGCCCAGAATCACAGTGGGG +
Preference number: 2 (lower is better)
Translates to: IFFLALTTSACYSHHLDNISECR*PRITVG
Trigger: CCCCACTGTGATTCTGGGTCATCTGCATTCAGAGAT...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAAATGCACTAAATCTCTaGATGCAGATGACCCAGAAT +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPNALNL*MQMTQN
Trigger: ATTCTGGGTCATCTGCATTCAGAGATTTAGTGCATT...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCATACAGCACAGGTCAGTaGATTTTCTCCATCAAACAA +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPYSTGQ*IFSIKQ
Trigger: TTGTTTGATGGAGAAAATTCACTGACCTGTGCTGTA...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCCGCGCCTGGCCTGCTaGCTTCTTAATGCTCTCTTT +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNPRLAC*LLNALF
Trigger: AAAGAGAGCATTAAGAAGTCAGCAGGCCAGGCGCGG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAGAGGGTAACCTCAGGTaGAGCTTTTTCTATAGCTGT +
Preference number: 2 (lower is better)
Translates to: LFRDSSVLNALWWALHVIEGNLR*SFFYSC
Trigger: ACAGCTATAGAAAAAGCTTCACCTGAGGTTACCCTC...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAATTCCAATCTCCTCTTaGTTAGGGTCAACTGATCTT +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPIPISS*LGSTDL
Trigger: AAGATCAGTTGACCCTAATCAAGAGGAGATTGGAAT...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATGGGTCATCTTTCTTATaGCAGCTGAGAGATGGAGGC +
Preference number: 2 (lower is better)
Translates to: IFFLALTTSACYSHHLDNGSSFL*QLRDGG
Trigger: GCCTCCATCTCTCAGCTGGCATAAGAAAGATGACCC...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAAGGCTAACTCAGCCATaGATATTCTTATGTCAACAG +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPRLTQP*IFLCQQ
Trigger: CTGTTGACATAAGAATATGCATGGCTGAGTTAGCCT...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAGCTTTGGCTCATCTCTaGAATCCAGCTAGAAACTCA +
Preference number: 2 (lower is better)
Translates to: LFRDSSVLNALWWALHVIALAHL*NPARNS
Trigger: TGAGTTTCTAGCTGGATTGCAGAGATGAGCCAAAGC...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGTTATTCCTCAAACATaGCAAGTATACTGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLVIPQT*QVYCCL
Trigger: GAGGCAGCAGTATACTTGGCATGTTTGAGGAATAAC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACCTGCTTTGTACAAATaGAAGAAAATGACATGGCTG +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPPALYK*KKMTWL
Trigger: CAGCCATGTCATTTTCTTCCATTTGTACAAAGCAGG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATGCAAGTACACTTGCTTaGCCACAGAGTACGCTTCTG +
Preference number: 2 (lower is better)
Translates to: IFFLALTTSACYSHHLDNASTLA*PQSTLL
Trigger: CAGAAGCGTACTCTGTGGCCAAGCAAGTGTACTTGC...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAATGGGTGGTGATTTTTaGCTGGTGGCCTTCAATGTA +
Preference number: 2 (lower is better)
Translates to: LFRDSSVLNALWWALHVIMGGDF*LVAFNV
Trigger: TACATTGAAGGCCACCAGCCAAAAATCACCACCCAT...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGTGTCTAGTGATGTTTaGCTCTTATGTATGGGTGGT +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLVSSDV*LLCMGG
Trigger: ACCACCCATACATAAGAGCCAAACATCACTAGACAC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATCTGAATGCTCTCTGGTaGGCACTGCACGTAATACAG +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHLNALW*ALHVIQ
Trigger: CTGTATTACGTGCAGTGCCCACCAGAGAGCATTCAG...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATTGCTTGCTGCTGCAGTaGGGCTTGGGAATGCCATCA +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNCLLLQ*GLGMPS
Trigger: TGATGGCATTCCCAAGCCCCACTGCAGCAGCAAGCA...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 90 bp GCTATAAGACATTGGTGGCATAATAGACATTCCTTGCTCACATGTTaGGAATCAGGTAGGTGTCAGTTAGATGACTCTGCTGATCTTGGC +
Preference number: 2 (lower is better)
Translates to: AIRHWWHNRHSLLTC*ESGRCQLDDSADLG
Trigger: GCCAAGATCAGCAGAGTCATCTAACTGACACCTACCTGATTCCAAACATGTGAGCAAGGAATGTCTATTATGCCACCAATGTCTTATAGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATATTTCACCCAAACAGGTaGATTTATCAGAGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: LFRDSSVLNALWWALHVIFHPNR*IYQSPQ
Trigger: TTGGGGACTCTGATAAATTCACCTGTTTGGGTGAAA...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATCTTTCTTATGCCAGCTaGGAGATGGAGGCAAATGAG +
Preference number: 2 (lower is better)
Translates to: IFFLALTTSACYSHHLDNLSYAS*EMEANE
Trigger: CTCATTTGCCTCCATCTCTCAGCTGGCATAAGAAAG...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAAATGCACTAAATCTCTaGATGCAGATGACCCAGAAT +
Preference number: 2 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLNALNL*MQMTQN
Trigger: ATTCTGGGTCATCTGCATTCAGAGATTTAGTGCATT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGTTTCATGAAAAGCCATaGAGAGACACTGCCAATCAT +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLFHEKP*RDTANH
Trigger: ATGATTGGCAGTGTCTCTTCATGGCTTTTCATGAAA...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTCTTGCTGCTGTTTCATaGAAAGCCATGAAGAGACAC +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSLAAVS*KAMKRH
Trigger: GTGTCTCTTCATGGCTTTTCATGAAACAGCAGCAAG...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATACAGCACAGGTCAGTaGATTTTCTCCATCAAACAA +
Preference number: 2 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLYSTGQ*IFSIKQ
Trigger: TTGTTTGATGGAGAAAATTCACTGACCTGTGCTGTA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGCTATCCACAGTGTTCTaGAATTCCTTGATGATAAGC +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLLSTVF*NSLMIS
Trigger: GCTTATCATCAAGGAATTTCAGAACACTGTGGATAG...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATATGGATGAATGAATCCTaGAACCCTGAAACTTCCCTT +
Preference number: 2 (lower is better)
Translates to: LFRDSSVLNALWWALHVIWMNES*NPETSL
Trigger: AAGGGAAGTTTCAGGGTTTCAGGATTCATTCATCCA...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGTTGTGTCTATTTCTATaGCAAGGAAATGCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLLCLFL*QGNAGP
Trigger: AGGACCAGCATTTCCTTGTCATAGAAATAGACACAA...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAAGGCTAACTCAGCCATaGATATTCTTATGTCAACAG +
Preference number: 2 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLRLTQP*IFLCQQ
Trigger: CTGTTGACATAAGAATATGCATGGCTGAGTTAGCCT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGTTACTGTGTAGCACTTaGTGCTGTTTCATGAAAAGC +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLLLCST*CCFMKS
Trigger: GCTTTTCATGAAACAGCAGCAAGTGCTACACAGTAA...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTGCTTTGGCTCATCTCTaGAATCCAGCTAGAAACTCA +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSALAHL*NPARNS
Trigger: TGAGTTTCTAGCTGGATTGCAGAGATGAGCCAAAGC...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAGACTATAGTTGTCAGTaGCTCAAGGGAATACAAAAA +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPDYSCQ*LKGIQK
Trigger: TTTTTGTATTCCCTTGAGGCACTGACAACTATAGTC...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAGTATGTCCATTCACATaGCTCTATTCTAGACTTTCT +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPVCPFT*LYSRLS
Trigger: AGAAAGTCTAGAATAGAGGCATGTGAATGGACATAC...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGTATTATATCAGGGGTaGAGTATTGTCTGTGTTGCT +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLVLYQG*SIVCVA
Trigger: AGCAACACAGACAATACTGCACCCCTGATATAATAC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTTCTATGACAAGGAAATaGTGGTCCTTCCAGTGTGGA +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSSMTRK*WSFQCG
Trigger: TCCACACTGGAAGGACCAGCATTTCCTTGTCATAGA...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAAAGAATCTGTTTCTTTaGTTTTTCCAGCTTCCAGAG +
Preference number: 2 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPKNLFL*FFQLPE
Trigger: CTCTGGAAGCTGGAAAAAGCAAAGAAACAGATTCTT...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAGAAGGCTATTTCAAGTaGGGACATTTGAGAAGAGTG +
Preference number: 2 (lower is better)
Translates to: LFRDSSVLNALWWALHVIEGYFK*GHLRRV
Trigger: CACTCTTCTCAAATGTCCCCACTTGAAATAGCCTTC...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGAACGTCCTATTTCCATaGCATGTTAATAGGTGCTAC +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLNVLFP*HVNRCY
Trigger: GTAGCACCTATTAACATGCCATGGAAATAGGACGTT...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAGGGATTCTGAACATATaGCTAATTGATCTCAAGCAG +
Preference number: 2 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLGILNI*LIDLKQ
Trigger: CTGCTTGAGATCAATTAGCCATATGTTCAGAATCCC...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGGGTCAGTAAGTGTTTaGTTAAAGTTTTCACTAGGG +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLGSVSV*LKFSLG
Trigger: CCCTAGTGAAAACTTTAACCAAACACTTACTGACCC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATCTTGACTCCTTTTATTaGCTGCTGCTCCCTAGACAG +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHLDSFY*LLLPRQ
Trigger: CTGTCTAGGGAGCAGCAGCCAATAAAAGGAGTCAAG...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTCACCTCTGCTGCTCCTaGTGGTTTATCTGGTATAAT +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSHLCCS*WFIWYN
Trigger: ATTATACCAGATAAACCACCAGGAGCAGCAGAGGTG...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CCTGGACAATTATGTTGGGGACAGAACAGTATAAATAATACACCCCTGGAGGACACATCAGTCTACTTCTaGCTGAACACTACATCAGAG +
Preference number: 2 (lower is better)
Translates to: PGQLCWGQNSINNTPLEDTSVYF*LNTTSE
Trigger: CTCTGATGTAGTGTTCAGCCAGAAGTAGACTGATGT...GTCCTCCAGGGGTGTATTATTTATACTGTTCTGTCCCCAACATAATTGTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557968.5
3UTR-3UTR TCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATGTGCTTCCCATTTGTTaGACCCAACCAAAAGCAAGA +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHVLPIC*TQPKAR
Trigger: TCTTGCTTTTGGTTGGGTTCAACAAATGGGAAGCAC...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATCAAGTGGGGACATTTaGGAAGAGTGTAATAAAACA +
Preference number: 2 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLSSGDI*EECNKT
Trigger: TGTTTTATTACACTCTTCTCAAATGTCCCCACTTGA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATATATGTTTTGCCTTCTaGATCCCTGGGAGGGAAACA +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHICFAF*IPGRET
Trigger: TGTTTCCCTCCCAGGGATTCAGAAGGCAAAACATAT...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATCCTCCTATTTTCTTTaGCTTTCTGAGAGATCTCTT +
Preference number: 2 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLSSYFL*LSERSL
Trigger: AAGAGATCTCTCAGAAAGTCAAAGAAAATAGGAGGA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATTCTAAAGAGGAATGCTaGGATGGAGTTTGGGGTGTA +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHSKEEC*DGVWGV
Trigger: TACACCCCAAACTCCATCTCAGCATTCCTCTTTAGA...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAATCCAACTTTGGCCCTaGTTAAATCAATTCAAGCCT +
Preference number: 2 (lower is better)
Translates to: LFRDSSVLNALWWALHVIIQLWP*LNQFKP
Trigger: AGGCTTGAATTGATTTAAGCAGGGCCAAAGTTGGAT...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAGTAAAGCCAGTTAAATaGAATAGATTTTGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLVKPVK*NRFWLR
Trigger: CCTGAGCCAAAATCTATTGCATTTAACTGGCTTTAC...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTTTCCATGGAGTCTCATaGTCCAGCAGGCTAACTCAG +
Preference number: 2 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLFHGVS*SSRLTQ
Trigger: CTGAGTTAGCCTGCTGGAGCATGAGACTCCATGGAA...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTCTGTGTAGCACTTGCTaGTGTTTCATGAAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSLCSTC*CFMKSH
Trigger: ATGGCTTTTCATGAAACAGCAGCAAGTGCTACACAG...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTCTAAATCTCTTCTGCTaGAGCCTTCCAGACCTTTAT +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSLNLFC*SLPDLY
Trigger: ATAAAGGTCTGGAAGGCTGCAGCAGAAGAGATTTAG...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTCTAAGGCATGATAATTaGTTGAACTTGGGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSLRHDN*LNLGGG
Trigger: TCCACCTCCCAAGTTCAAGCAATTATCATGCCTTAG...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATGGGATTACAGACACATaGCATCACACCCGACTAATT +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHGITDT*HHTRLI
Trigger: AATTAGTCGGGTGTGATGGCATGTGTCTGTAATCCC...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAATCCTGTCACTCATTTaGTTAAATTCTCTGATGGCT +
Preference number: 2 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLILSLI*LNSLMA
Trigger: AGCCATCAGAGAATTTAAGCAAATGAGTGACAGGAT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTATATGGGTCCACTCCTaGGCTTGGTTTTCCATAAAA +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSIWVHS*AWFSIK
Trigger: TTTTATGGAAAACCAAGCGCAGGAGTGGACCCATAT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTTATCCAGGTAGCTGCTaGAGCTTATGTTTTTCAGTG +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSYPGSC*SLCFSV
Trigger: CACTGAAAAACATAAGCTGCAGCAGCTACCTGGATA...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATATGGAAGAAAATGACATaGCTGATAAGCAGAAAGGCT +
Preference number: 2 (lower is better)
Translates to: LFRDSSVLNALWWALHVIWKKMT*LISRKA
Trigger: AGCCTTTCTGCTTATCAGCCATGTCATTTTCTTCCA...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATATGGGTGGTGATTTTTaGCTGGTGGCCTTCAATGTA +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHMGGDF*LVAFNV
Trigger: TACATTGAAGGCCACCAGCCAAAAATCACCACCCAT...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTTTTGGCTCTTATGTATaGGTGGTGATTTTTGGCTGG +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSFGSYV*VVIFGW
Trigger: CCAGCCAAAAATCACCACCCATACATAAGAGCCAAA...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCAGTTCTTCCCTAGGTaGCCTTTCCATGTGGTGTCT +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNQFFPR*PFHVVS
Trigger: AGACACCACATGGAAAGGCCACCTAGGGAAGAACTG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATTCTGGACAGGCAAGATaGAAAACAGTGTCTCTATAC +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHSGQAR*KTVSLY
Trigger: GTATAGAGACACTGTTTTTCATCTTGCCTGTCCAGA...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATATTCATGGTATTTGGTaGTGTTTCGAGGCTCTTAGG +
Preference number: 2 (lower is better)
Translates to: IFFLALTTSACYSHHLDNIHGIW*CFEALR
Trigger: CCTAAGAGCCTCGAAACATCACCAAATACCATGAAT...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGGCATGATAATTGCTTaGACTTGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNGMIIA*TWEVEV
Trigger: AACCTCCACCTCCCAAGTTCAAGCAATTATCATGCC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATATTGCTCAGTATTGCCTaGTTTGTACAAATGGAAGAA +
Preference number: 2 (lower is better)
Translates to: LFRDSSVLNALWWALHVILLSIA*FVQMEE
Trigger: TTCTTCCATTTGTACAAAGCAGGCAATACTGAGCAA...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATATATGGGTCCACTCCTaGGCTTGGTTTTCCATAAAA +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHIWVHS*AWFSIK
Trigger: TTTTATGGAAAACCAAGCGCAGGAGTGGACCCATAT...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATTATCCAGGTAGCTGCTaGAGCTTATGTTTTTCAGTG +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHYPGSC*SLCFSV
Trigger: CACTGAAAAACATAAGCTGCAGCAGCTACCTGGATA...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTCACATTTATTACTTCTaGCCAGATTGTGTAACCAGG +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSHIYYF*PDCVTR
Trigger: CCTGGTTACACAATCTGGGCAGAAGTAATAAATGTG...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATCTTCTAATCTCCCACTaGTGCTTCCCATTTGTTGAA +
Preference number: 2 (lower is better)
Translates to: IFFLALTTSACYSHHLDNLLISH*CFPFVE
Trigger: TTCAACAAATGGGAAGCACCAGTGGGAGATTAGAAG...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACCAACTGATGATGACATaGCAGGAAAGGAGCCAGGGA +
Preference number: 2 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYQLMMT*QERSQG
Trigger: TCCCTGGCTCCTTTCCTGCCATGTCATCATCAGTTG...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCATGCCTTCTGAATCCCTaGGAGGGAAACAACGTAATG +
Preference number: 2 (lower is better)
Translates to: TILQTSYFHGMLIGATYSCLLNP*EGNNVM
Trigger: CATTACGTTGTTTCCCTCCCAGGGATTCAGAAGGCA...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTGGACTGCCATTAACATaGCCTCAAAGAAAAGAACAA +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSGLPLT*PQRKEQ
Trigger: TTGTTCTTTTCTTTGAGGCCATGTTAATGGCAGTCC...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGCAATCAGCTAATTGCTaGTATAAACATTACAGCACA +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLQSANC*YKHYST
Trigger: TGTGCTGTAATGTTTATACCAGCAATTAGCTGATTG...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATACCTTCTCCGTTTTACTaGAAAACATCTTCAGTATTC +
Preference number: 2 (lower is better)
Translates to: LFRDSSVLNALWWALHVIPSPFY*KTSSVF
Trigger: GAATACTGAAGATGTTTTCCAGTAAAACGGAGAAGG...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCCATGCTATTTAAACTaGCACCCCTTTCCTGCACCA +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNPCYLN*HPFPAP
Trigger: TGGTGCAGGAAAGGGGTGCCAGTTTAAATAGCATGG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGCTTGATATTGAAGAATaGTATTATATCAGGGGTGCA +
Preference number: 2 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLLDIEE*YYIRGA
Trigger: TGCACCCCTGATATAATACCATTCTTCAATATCAAG...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATCTTTGGGAAGTAATTTaGTTCCAAGAAGCCATGAGG +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHLWEVI*FQEAMR
Trigger: CCTCATGGCTTCTTGGAACCAAATTACTTCCCAAAG...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACTCTGCTTTCCTTCGCTaGCTTCATTCTAAGTCAGGC +
Preference number: 2 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYSAFLR*LHSKSG
Trigger: GCCTGACTTAGAATGAAGTCAGCGAAGGAAAGCAGA...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACAGCTGGGGTCAGAAATaGCCTTTCGAAAGAAAGCCA +
Preference number: 2 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYSWGQK*PFERKP
Trigger: TGGCTTTCTTTCGAAAGGTCATTTCTGACCCCAGCT...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATTTTTATTGGTCAAAGTaGGTTAGAAGGCCAATCCAG +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHFYWSK*VRRPIQ
Trigger: CTGGATTGGCCTTCTAACTCACTTTGACCAATAAAA...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGGTAACTGGGGTAACTaGTTGGGAACAGAAGAGATA +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNGNWGN*LGTEEI
Trigger: TATCTCTTCTGTTCCCAAGCAGTTACCCCAGTTACC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACGCCATGAAGAGACACTaGCAATCATGTGGCAAGTAC +
Preference number: 2 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYAMKRH*QSCGKY
Trigger: GTACTTGCCACATGATTGGCAGTGTCTCTTCATGGC...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATGACCTAGTTAGTCACTaGTTCTCTAAATCTCTTCTG +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHDLVSH*FSKSLL
Trigger: CAGAAGAGATTTAGAGAAGCAGTGACTAACTAGGTC...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATAAATACCTGATATACTaGACTTGCTGGCACATTCTC +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHKYLIY*TCWHIL
Trigger: GAGAATGTGCCAGCAAGTGCAGTATATCAGGTATTT...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATGTATTATATCAGGGGTaGAGTATTGTCTGTGTTGCT +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHVLYQG*SIVCVA
Trigger: AGCAACACAGACAATACTGCACCCCTGATATAATAC...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATTCTGCTGATCTTGGCTaGAATCATTCACATATCTTG +
Preference number: 2 (lower is better)
Translates to: IFFLALTTSACYSHHLDNSADLG*NHSHIL
Trigger: CAAGATATGTGAATGATTCCAGCCAAGATCAGCAGA...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTGCTATAAGACATTGGTaGCATAATAGACATTCCTTG +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSAIRHW*HNRHSL
Trigger: CAAGGAATGTCTATTATGCCACCAATGTCTTATAGC...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCACAGAGTACGCTTCTaGACAGGCAAGATGAAAAAC +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNHRVRF*TGKMKN
Trigger: GTTTTTCATCTTGCCTGTCCAGAAGCGTACTCTGTG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATGGACTGCCATTAACATaGCCTCAAAGAAAAGAACAA +
Preference number: 2 (lower is better)
Translates to: IFFLALTTSACYSHHLDNGLPLT*PQRKEQ
Trigger: TTGTTCTTTTCTTTGAGGCCATGTTAATGGCAGTCC...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATATACCTAATGCATTCATaGTATTTGGTGATGTTTCGA +
Preference number: 2 (lower is better)
Translates to: LFRDSSVLNALWWALHVIYLMHS*YLVMFR
Trigger: TCGAAACATCACCAAATACCATGAATGCATTAGGTA...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAAAGGACCTCTTAGATTaGCCCTTAATCTTAAGTTTT +
Preference number: 2 (lower is better)
Translates to: LFRDSSVLNALWWALHVIKDLLD*PLILSF
Trigger: AAAACTTAAGATTAAGGGCCAATCTAAGAGGTCCTT...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTAGCATTAGTGGCACTTaGCCATTCAATTCTGTTATT +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSSISGT*PFNSVI
Trigger: AATAACAGAATTGAATGGCCAAGTGCCACTAATGCT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATACATACTCTGTATCTTaGAGTATGGCATCCTATCCT +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHTYSVS*SMASYP
Trigger: AGGATAGGATGCCATACTCCAAGATACAGAGTATGT...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATACCCCTAGGAATAAATaGGTTCCAAGACCCATTTAT +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHTPRNK*VPRPIY
Trigger: ATAAATGGGTCTTGGAACCCATTTATTCCTAGGGGT...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCTCATTCCTTGCAACTaGGAGGTCAGTCCTTTCTTA +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNLIPCN*EVSPFL
Trigger: TAAGAAAGGACTGACCTCCCAGTTGCAAGGAATGAG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATTTTCACCCAAACAGGTaGATTTATCAGAGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNFHPNR*IYQSPQ
Trigger: TTGGGGACTCTGATAAATTCACCTGTTTGGGTGAAA...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACAAAGGCAGGATCACTTaGGGTCAGGAGTTTCAGATA +
Preference number: 2 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYKGRIT*GQEFQI
Trigger: TATCTGAAACTCCTGACCTCAAGTGATCCTGCCTTT...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATCTGCTGAATAAAGAGTaGGGTCATAGTAAATCAATC +
Preference number: 2 (lower is better)
Translates to: IFFLALTTSACYSHHLDNLLNKE*GHSKSI
Trigger: GATTGATTTACTATGACCTCACTCTTTATTCAGCAG...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATTTGCTCAGTATTGCCTaGTTTGTACAAATGGAAGAA +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHLLSIA*FVQMEE
Trigger: TTCTTCCATTTGTACAAAGCAGGCAATACTGAGCAA...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCTGTGTAGCACTTGCTaGTGTTTCATGAAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNLCSTC*CFMKSH
Trigger: ATGGCTTTTCATGAAACAGCAGCAAGTGCTACACAG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCTAAGGCATGATAATTaGTTGAACTTGGGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNLRHDN*LNLGGG
Trigger: TCCACCTCCCAAGTTCAAGCAATTATCATGCCTTAG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAGAAGGCTATTTCAAGTaGGGACATTTGAGAAGAGTG +
Preference number: 2 (lower is better)
Translates to: TILQTSYFHGMLIGATYSEGYFK*GHLRRV
Trigger: CACTCTTCTCAAATGTCCCCACTTGAAATAGCCTTC...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACCCTTGCTCACATGTTTaGAATCAGGTAGGTGTCAGT +
Preference number: 2 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYPCSHV*NQVGVS
Trigger: ACTGACACCTACCTGATTCCAAACATGTGAGCAAGG...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATTTTGGCTCTTATGTATaGGTGGTGATTTTTGGCTGG +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNFGSYV*VVIFGW
Trigger: CCAGCCAAAAATCACCACCCATACATAAGAGCCAAA...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTAAGGACCTCTTAGATTaGCCCTTAATCTTAAGTTTT +
Preference number: 2 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSKDLLD*PLILSF
Trigger: AAAACTTAAGATTAAGGGCCAATCTAAGAGGTCCTT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATCCTTCTCCGTTTTACTaGAAAACATCTTCAGTATTC +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHPSPFY*KTSSVF
Trigger: GAATACTGAAGATGTTTTCCAGTAAAACGGAGAAGG...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATAGAGATGGAGGCAAATaGGTGATAGAATTGTTCTCT +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNRDGGK*VIELFS
Trigger: AGAGAACAATTCTATCACTCATTTGCCTCCATCTCT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTAGAGATGGAGGCAAATaGGTGATAGAATTGTTCTCT +
Preference number: 2 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLRDGGK*VIELFS
Trigger: AGAGAACAATTCTATCACTCATTTGCCTCCATCTCT...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCTATCCACAGTGTTCTaGAATTCCTTGATGATAAGC +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNLSTVF*NSLMIS
Trigger: GCTTATCATCAAGGAATTTCAGAACACTGTGGATAG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATAGTCCTTTCTTAAAGTaGATCAGGCAGTGTATCTCT +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNSPFLK*IRQCIS
Trigger: AGAGATACACTGCCTGATTCACTTTAAGAAAGGACT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATAGGGAAGGAATTGTTTaGGGGACATCTTCAAAAACT +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNREGIV*GTSSKT
Trigger: AGTTTTTGAAGATGTCCCTCAAACAATTCCTTCCCT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATTTACTGTGTAGCACTTaGTGCTGTTTCATGAAAAGC +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNLLCST*CCFMKS
Trigger: GCTTTTCATGAAACAGCAGCAAGTGCTACACAGTAA...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCACATTTATTACTTCTaGCCAGATTGTGTAACCAGG +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNHIYYF*PDCVTR
Trigger: CCTGGTTACACAATCTGGGCAGAAGTAATAAATGTG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTTGGAAGAAAATGACATaGCTGATAAGCAGAAAGGCT +
Preference number: 2 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLWKKMT*LISRKA
Trigger: AGCCTTTCTGCTTATCAGCCATGTCATTTTCTTCCA...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGGGATTCTGAACATATaGCTAATTGATCTCAAGCAG +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNGILNI*LIDLKQ
Trigger: CTGCTTGAGATCAATTAGCCATATGTTCAGAATCCC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATTACCTAATGCATTCATaGTATTTGGTGATGTTTCGA +
Preference number: 2 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHYLMHS*YLVMFR
Trigger: TCGAAACATCACCAAATACCATGAATGCATTAGGTA...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACGGTCATGAGTACAGGTaGAAAGATATAAAGATGTTG +
Preference number: 2 (lower is better)
Translates to: AREINNIISFSSQLLISHGHEYR*KDIKML
Trigger: CAACATCTTTATATCTTTTCACCTGTACTCATGACC...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACTTTCATGAAAAGCCATaGAGAGACACTGCCAATCAT +
Preference number: 2 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYFHEKP*RDTANH
Trigger: ATGATTGGCAGTGTCTCTTCATGGCTTTTCATGAAA...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATTCCTCCTATTTTCTTTaGCTTTCTGAGAGATCTCTT +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNSSYFL*LSERSL
Trigger: AAGAGATCTCTCAGAAAGTCAAAGAAAATAGGAGGA...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACACCTTTAATATGTTTTaGCTTCTGAATCCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYTFNMF*LLNPWE
Trigger: CTCCCAGGGATTCAGAAGGCAAAACATATTAAAGGT...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGTAAAGCCAGTTAAATaGAATAGATTTTGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNVKPVK*NRFWLR
Trigger: CCTGAGCCAAAATCTATTGCATTTAACTGGCTTTAC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACGACCTAGTTAGTCACTaGTTCTCTAAATCTCTTCTG +
Preference number: 2 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYDLVSH*FSKSLL
Trigger: CAGAAGAGATTTAGAGAAGCAGTGACTAACTAGGTC...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACCCTGCTTTGTACAAATaGAAGAAAATGACATGGCTG +
Preference number: 2 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYPALYK*KKMTWL
Trigger: CAGCCATGTCATTTTCTTCCATTTGTACAAAGCAGG...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACAACGTCCTATTTCCATaGCATGTTAATAGGTGCTAC +
Preference number: 2 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYNVLFP*HVNRCY
Trigger: GTAGCACCTATTAACATGCCATGGAAATAGGACGTT...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACTCTGCTGATCTTGGCTaGAATCATTCACATATCTTG +
Preference number: 2 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYSADLG*NHSHIL
Trigger: CAAGATATGTGAATGATTCCAGCCAAGATCAGCAGA...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR TCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACGGTCATGAGTACAGGTaGAAAGATATAAAGATGTTG +
Preference number: 2 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYGHEYR*KDIKML
Trigger: CAACATCTTTATATCTTTTCACCTGTACTCATGACC...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATATAATAGACATTCCTTaGTCACATGTTTGGAATCAG +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNIIDIP*SHVWNQ
Trigger: CTGATTCCAAACATGTGAGCAAGGAATGTCTATTAT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACGACTATAGTTGTCAGTaGCTCAAGGGAATACAAAAA +
Preference number: 2 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYDYSCQ*LKGIQK
Trigger: TTTTTGTATTCCCTTGAGGCACTGACAACTATAGTC...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATTCTCATTTAGGTCTCTaGTCAATTTTACCTTATCAC +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNSHLGL*SILPYH
Trigger: GTGATAAGGTAAAATTGAGCAGAGACCTAAATGAGA...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGGACAAATACCAGTTTaGCTACTTGGACTATTAAAT +
Preference number: 2 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNGQIPV*LLGLLN
Trigger: ATTTAATAGTCCAAGTAGCCAAACTGGTATTTGTCC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACCAATCAGCTAATTGCTaGTATAAACATTACAGCACA +
Preference number: 2 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYQSANC*YKHYST
Trigger: TGTGCTGTAATGTTTATACCAGCAATTAGCTGATTG...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp TCTGCAGTTGAAGCAGACTCTGAAGGAGCTGACAGTTaGAGGCTGCTGACCTCATTCCTTGCAACTGGGAGG +
Preference number: 3 (lower is better)
Translates to: SAVEADSEGADS*RLLTSFLATGR
Trigger: CCTCCCAGTTGCAAGGAATGAGGTCAGCAGCCTCCAACTGTCAGCTCCTTCAGAGTCTGCTTCAACTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp AAGCAGACTCTGAAGGAGCTGACAGTTGGAGGCTGCTaGCCTCATTCCTTGCAACTGGGAGGTCAGTCCTTT +
Preference number: 3 (lower is better)
Translates to: KQTLKELTVGGC*PHSLQLGGQSF
Trigger: AAAGGACTGACCTCCCAGTTGCAAGGAATGAGGTCAGCAGCCTCCAACTGTCAGCTCCTTCAGAGTCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 72 bp GACCAGGGCAACCTGGCTCTGTTCCATGGAGTCTCATaGTCCAGCAGGCTAACTCAGCCATGCATATTCTTA +
Preference number: 3 (lower is better)
Translates to: DQGNLALFHGVS*SSRLTQPCIFL
Trigger: TAAGAATATGCATGGCTGAGTTAGCCTGCTGGAGCATGAGACTCCATGGAACAGAGCCAGGTTGCCCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 72 bp CCACATTCCTTGAGAGGCCTGAGTTCCAGGCCATCATaGCCTTTTGAGGATGGGTTGCCACACCTACACATT +
Preference number: 3 (lower is better)
Translates to: PHSLRGLSSRPS*PFEDGLPHLHI
Trigger: AATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGGCCTGGAACTCAGGCCTCTCAAGGAATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 72 bp CCCTCTGGTAGTGGTTTCCTAATCCATTGCTCTCCTTaGTTCTTGGCTCCTCCCTCTGGGATTTTGGCTCCA +
Preference number: 3 (lower is better)
Translates to: PSGSGFLIHCSP*FLAPPSGILAP
Trigger: TGGAGCCAAAATCCCAGAGGGAGGAGCCAAGAAGCAAGGAGAGCAATGGATTAGGAAACCACTACCAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp GGCAGCTACATTCAGCTGGACTTCAGTCACCAGACATaGGAAGGGTATGACCTCAAGCACAGTGTCCTTCTG +
Preference number: 3 (lower is better)
Translates to: GSYIQLDFSHQT*EGYDLKHSVLL
Trigger: CAGAAGGACACTGTGCTTGAGGTCATACCCTTCCCATGTCTGGTGACTGAAGTCCAGCTGAATGTAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAGAGGCTGCTTGGGGCTaGTGGTTCCTATCACTCACC +
Preference number: 3 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPEAAWG*WFLSLT
Trigger: GGTGAGTGATAGGAACCACAAGCCCCAAGCAGCCTC...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAGCTTCCAGAGGCTGCTaGGGGCTTGTGGTTCCTATC +
Preference number: 3 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPASRGC*GLVVPI
Trigger: GATAGGAACCACAAGCCCCAAGCAGCCTCTGGAAGC...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp TCAGCTGGACTTCAGTCACCAGACATGGGAAGGGTATaGCCTCAAGCACAGTGTCCTTCTGCAGTTGAAGCA +
Preference number: 3 (lower is better)
Translates to: SAGLQSPDMGRV*PQAQCPSAVEA
Trigger: TGCTTCAACTGCAGAAGGACACTGTGCTTGAGGTCATACCCTTCCCATGTCTGGTGACTGAAGTCCAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp CTCTGCTACCACCTCTGCTGCTCCTGGTGGTTTATCTaGTATAATTCAGACCCACATTCCTTGAGAGGCCTG +
Preference number: 3 (lower is better)
Translates to: LCYHLCCSWWFI*YNSDPHSLRGL
Trigger: CAGGCCTCTCAAGGAATGTGGGTCTGAATTATACCAGATAAACCACCAGGAGCAGCAGAGGTGGTAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp GGGACAAATTACAGTGCTTGCTGCTGCAGTGGGGCTTaGGAATGCCATCAATACTTGTCACATCCCCTCATC +
Preference number: 3 (lower is better)
Translates to: GTNYSACCCSGA*ECHQYLSHPLI
Trigger: GATGAGGGGATGTGACAAGTATTGATGGCATTCCCAAGCCCCACTGCAGCAGCAAGCACTGTAATTTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAAATCCATTGCTCTCCTaGCTTCTTGGCTCCTCCCTC +
Preference number: 3 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPNPLLS*LLGSSL
Trigger: GAGGGAGGAGCCAAGAAGCAAGGAGAGCAATGGATT...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 72 bp TCAGTTCATCCCTCTGGTAGTGGTTTCCTAATCCATTaGTCTCCTTGCTTCTTGGCTCCTCCCTCTGGGATT +
Preference number: 3 (lower is better)
Translates to: SVHPSGSGFLIH*SPCFLAPPSGI
Trigger: AATCCCAGAGGGAGGAGCCAAGAAGCAAGGAGAGCAATGGATTAGGAAACCACTACCAGAGGGATGAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp TTCGCTGACTTCATTCTAAGTCAGGCTCTTTTCACCTaGCAGCAGAGATGGCCACTAGCAGGTAGGCTTCAA +
Preference number: 3 (lower is better)
Translates to: FADFILSQALFT*QQRWPLAGRLQ
Trigger: TTGAAGCCTACCTGCTAGTGGCCATCTCTGCTGCCAGGTGAAAAGAGCCTGACTTAGAATGAAGTCAGCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp AGAGACACTGCCAATCATGTGGCAAGTACACTTGCTTaGCCACAGAGTACGCTTCTGGACAGGCAAGATGAA +
Preference number: 3 (lower is better)
Translates to: RDTANHVASTLA*PQSTLLDRQDE
Trigger: TTCATCTTGCCTGTCCAGAAGCGTACTCTGTGGCCAAGCAAGTGTACTTGCCACATGATTGGCAGTGTCTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp ACATTCCATTCATGTGCCCACTGTGCTAGCACTGGGTaGCGAATAACTGAAGCAGGAAGGATGACGTCAACT +
Preference number: 3 (lower is better)
Translates to: TFHSCAHCASTG*RITEAGRMTST
Trigger: AGTTGACGTCATCCTTCCTGCTTCAGTTATTCGCCACCCAGTGCTAGCACAGTGGGCACATGAATGGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp TGCTTTTTCCAGCTTCCAGAGGCTGCTTGGGGCTTGTaGTTCCTATCACTCACCTGTAAAGCCAACAATAGC +
Preference number: 3 (lower is better)
Translates to: CFFQLPEAAWGL*FLSLTCKANNS
Trigger: GCTATTGTTGGCTTTACAGGTGAGTGATAGGAACCACAAGCCCCAAGCAGCCTCTGGAAGCTGGAAAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp CTGTTTCTTTGCTTTTTCCAGCTTCCAGAGGCTGCTTaGGGCTTGTGGTTCCTATCACTCACCTGTAAAGCC +
Preference number: 3 (lower is better)
Translates to: LFLCFFQLPEAA*GLWFLSLTCKA
Trigger: GGCTTTACAGGTGAGTGATAGGAACCACAAGCCCCAAGCAGCCTCTGGAAGCTGGAAAAAGCAAAGAAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp TTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATaGTGTTACCCAGGGTCACTTATGTGGTTGCATGCA +
Preference number: 3 (lower is better)
Translates to: FLCTGWWFFSSR*CYPGSLMWLHA
Trigger: TGCATGCAACCACATAAGTGACCCTGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATTGGGGAGAAGCGCTTaGGCTCATCTCTGCAATCCA +
Preference number: 3 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLLGRSA*AHLCNP
Trigger: TGGATTGCAGAGATGAGCCAAAGCGCTTCTCCCCAA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACCTGATATACTGCACTaGCTGGCACATTCTCTTCCG +
Preference number: 3 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPPDILH*LAHSLP
Trigger: CGGAAGAGAATGTGCCAGCAAGTGCAGTATATCAGG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp CTACTTCTGGCTGAACACTACATCAGAGTTTCCTCATaGCGCTCGGTCTCAGTTGAAACTACCTTCCCTCTC +
Preference number: 3 (lower is better)
Translates to: LLLAEHYIRVSS*RSVSVETTFPL
Trigger: GAGAGGGAAGGTAGTTTCAACTGAGACCGAGCGTCATGAGGAAACTCTGATGTAGTGTTCAGCCAGAAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557968.5
3UTR GCA 72 bp AAAACTGTGTCCCCTTGTGGGACCAAGACCTCTCACTaGAGAGTTCAGAGTTATGAAGAGGTGCAAAGTACC +
Preference number: 3 (lower is better)
Translates to: KTVSPCGTKTSH*RVQSYEEVQST
Trigger: GGTACTTTGCACCTCTTCATAACTCTGAACTCTGCAGTGAGAGGTCTTGGTCCCACAAGGGGACACAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 72 bp AGATGGGAGATTAGTGGGACAAATTACAGTGCTTGCTaGTGCAGTGGGGCTTGGGAATGCCATCAATACTTG +
Preference number: 3 (lower is better)
Translates to: RWEISGTNYSAC*CSGAWECHQYL
Trigger: CAAGTATTGATGGCATTCCCAAGCCCCACTGCAGCAGCAAGCACTGTAATTTGTCCCACTAATCTCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp ATGGGCATTAAGGTAACTTTGGCAGCTACATTCAGCTaGACTTCAGTCACCAGACATGGGAAGGGTATGACC +
Preference number: 3 (lower is better)
Translates to: MGIKVTLAATFS*TSVTRHGKGMT
Trigger: GGTCATACCCTTCCCATGTCTGGTGACTGAAGTCCAGCTGAATGTAGCTGCCAAAGTTACCTTAATGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAAGGCATGATAATTGCTaGAACTTGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPRHDNC*NLGGGG
Trigger: ACCTCCACCTCCCAAGTTCAAGCAATTATCATGCCT...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCATGGTTTCCTAATCCATaGCTCTCCTTGCTTCTTGGC +
Preference number: 3 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPWFPNP*LSLLLG
Trigger: GCCAAGAAGCAAGGAGAGCAATGGATTAGGAAACCA...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAGTGATGGGATTCTCATaGGCAGCTCAGATCACTCCT +
Preference number: 3 (lower is better)
Translates to: LFRDSSVLNALWWALHVIVMGFS*AAQITP
Trigger: AGGAGTGATCTGAGCTGCCAATGAGAATCCCATCAC...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGGTCCACTCCTGCGCTaGGTTTTCCATAAAATAGGT +
Preference number: 3 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLGPLLR*VFHKIG
Trigger: ACCTATTTTATGGAAAACCAAGCGCAGGAGTGGACC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 72 bp CATGGAGTCTCATGCTCCAGCAGGCTAACTCAGCCATaGATATTCTTATGTCAACAGCAGAAGCACAAGTGT +
Preference number: 3 (lower is better)
Translates to: HGVSCSSRLTQP*IFLCQQQKHKC
Trigger: ACACTTGTGCTTCTGCTGTTGACATAAGAATATGCATGGCTGAGTTAGCCTGCTGGAGCATGAGACTCCATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp TTCATGAAAAGCCATGAAGAGACACTGCCAATCATGTaGCAAGTACACTTGCTTGGCCACAGAGTACGCTTC +
Preference number: 3 (lower is better)
Translates to: FMKSHEETLPIM*QVHLLGHRVRF
Trigger: GAAGCGTACTCTGTGGCCAAGCAAGTGTACTTGCCACATGATTGGCAGTGTCTCTTCATGGCTTTTCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAACTGGTGCTTCCCATTaGTTGAACCCAACCAAAAGC +
Preference number: 3 (lower is better)
Translates to: LFRDSSVLNALWWALHVITGASH*LNPTKS
Trigger: GCTTTTGGTTGGGTTCAACAAATGGGAAGCACCAGT...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAGATCCTGTCACTCATTaGCTTAAATTCTCTGATGGC +
Preference number: 3 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPDPVTH*LKFSDG
Trigger: GCCATCAGAGAATTTAAGCAAATGAGTGACAGGATC...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAAAGGAAGGGAAGGAATaGTTTGAGGGACATCTTCAA +
Preference number: 3 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPKEGKE*FEGHLQ
Trigger: TTGAAGATGTCCCTCAAACAATTCCTTCCCTTCCTT...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp TGCTTGGCCACAGAGTACGCTTCTGGACAGGCAAGATaGAAAACAGTGTCTCTATACAGTCCATCAGAAGAA +
Preference number: 3 (lower is better)
Translates to: CLATEYASGQAR*KTVSLYSPSEE
Trigger: TTCTTCTGATGGACTGTATAGAGACACTGTTTTTCATCTTGCCTGTCCAGAAGCGTACTCTGTGGCCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp TGGAGTATGGCATCCTATCCTTGTAGAATTTGCCTATaGGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTT +
Preference number: 3 (lower is better)
Translates to: WSMASYPCRICL*AGVQLYLQQVV
Trigger: AACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAAATTCTACAAGGATAGGATGCCATACTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp GACAAAGATACCAGAGTTCTCTCTCTCTGCATCATGTaGGGATATAGCAGGAAGATGGCTGTCTGCAAACCA +
Preference number: 3 (lower is better)
Translates to: DKDTRVLSLCIM*GYSRKMAVCKP
Trigger: TGGTTTGCAGACAGCCATCTTCCTGCTATATCCTCACATGATGCAGAGAGAGAGAACTCTGGTATCTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp CTGATCTTGGCTGGAATCATTCACATATCTTGGGTTTaGCTGGCCATCAGCCAATCTAGACAAGATTCAGTG +
Preference number: 3 (lower is better)
Translates to: LILAGIIHISWV*LAISQSRQDSV
Trigger: CACTGAATCTTGTCTAGATTGGCTGATGGCCAGCCAAACCCAAGATATGTGAATGATTCCAGCCAAGATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTaGGCACTGCACGTAATACAGAGACCTTCACAGTTC +
Preference number: 3 (lower is better)
Translates to: LFRDSSVLNALW*ALHVIQRPSQF
Trigger: GAACTGTGAAGGTCTCTGTATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp AATCCATTGCTCTCCTTGCTTCTTGGCTCCTCCCTCTaGGATTTTGGCTCCATCTTCCATCTATTTTTCCTT +
Preference number: 3 (lower is better)
Translates to: NPLLSLLLGSSL*DFGSIFHLFFL
Trigger: AAGGAAAAATAGATGGAAGATGGAGCCAAAATCCCAGAGGGAGGAGCCAAGAAGCAAGGAGAGCAATGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATGGGAGGTAATACCTTaGAGACCTTCTGTGTCTTTA +
Preference number: 3 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLWEVIP*RPSVSL
Trigger: TAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGTACATACTCTGTATCTaGGAGTATGGCATCCTATCC +
Preference number: 3 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLYILCI*EYGILS
Trigger: GGATAGGATGCCATACTCCAAGATACAGAGTATGTA...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp TCAACTTCTAATCTCCCACTGGTGCTTCCCATTTGTTaGACCCAACCAAAAGCAAGAGAGCAAAGGAACCTA +
Preference number: 3 (lower is better)
Translates to: STSNLPLVLPIC*TQPKAREQRNL
Trigger: TAGGTTCCTTTGCTCTCTTGCTTTTGGTTGGGTTCAACAAATGGGAAGCACCAGTGGGAGATTAGAAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp ATTCTAAGTCAGGCTCTTTTCACCTGGCAGCAGAGATaGCCACTAGCAGGTAGGCTTCAATTATTATCAGTT +
Preference number: 3 (lower is better)
Translates to: ILSQALFTWQQR*PLAGRLQLLSV
Trigger: AACTGATAATAATTGAAGCCTACCTGCTAGTGGCCATCTCTGCTGCCAGGTGAAAAGAGCCTGACTTAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp AGTGATGTTTGGCTCTTATGTATGGGTGGTGATTTTTaGCTGGTGGCCTTCAATGTAGGGTCAGTAAGTGTT +
Preference number: 3 (lower is better)
Translates to: SDVWLLCMGGDF*LVAFNVGSVSV
Trigger: AACACTTACTGACCCTACATTGAAGGCCACCAGCCAAAAATCACCACCCATACATAAGAGCCAAACATCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATACTGGTGCTTCCCATTaGTTGAACCCAACCAAAAGC +
Preference number: 3 (lower is better)
Translates to: IFFLALTTSACYSHHLDNTGASH*LNPTKS
Trigger: GCTTTTGGTTGGGTTCAACAAATGGGAAGCACCAGT...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTAATCATTCACATATCTaGGGTTTGGCTGGCCATCAG +
Preference number: 3 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSNHSHI*GLAGHQ
Trigger: CTGATGGCCAGCCAAACCCAAGATATGTGAATGATT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACATAATAGACATTCCTaGCTCACATGTTTGGAATCA +
Preference number: 3 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPHNRHS*LTCLES
Trigger: TGATTCCAAACATGTGAGCAAGGAATGTCTATTATG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAGCTTTTTCTAGTCCATaGATCCAAGTTTTTCAGACA +
Preference number: 3 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPAFSSP*IQVFQT
Trigger: TGTCTGAAAAACTTGGATCAATGGACTAGAAAAAGC...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGAGGGTCAGTAAGTGTTaGGTTAAAGTTTTCACTAGG +
Preference number: 3 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLRVSKC*VKVFTR
Trigger: CCTAGTGAAAACTTTAACCAAACACTTACTGACCCT...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAAAACTCTTTGATTTTTaGCTTCCCATGGGCATTAAG +
Preference number: 3 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPKLFDF*LPMGIK
Trigger: CTTAATGCCCATGGGAAGCAAAAAATCAAAGAGTTT...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp CTGATAAATTACTGTGTAGCACTTGCTGCTGTTTCATaGAAAGCCATGAAGAGACACTGCCAATCATGTGGC +
Preference number: 3 (lower is better)
Translates to: LINYCVALAAVS*KAMKRHCQSCG
Trigger: GCCACATGATTGGCAGTGTCTCTTCATGGCTTTTCATGAAACAGCAGCAAGTGCTACACAGTAATTTATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp GGAGCGCCCACTAAACACCTAACCATGCTGAAACTCTaGTCTTGGATTTCCATATTTTCAGTCTCCAGAAAT +
Preference number: 3 (lower is better)
Translates to: GAPTKHLTMLKL*SWISIFSVSRN
Trigger: ATTTCTGGAGACTGAAAATATGGAAATCCAAGATCAGAGTTTCAGCATGGTTAGGTGTTTAGTGGGCGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 72 bp CTGTTCCAAACTAGTGTCCTTGTTATTCCTCAAACATaGCAAGTATACTGCTGCCTCAGTACCTTTGTGTGT +
Preference number: 3 (lower is better)
Translates to: LFQTSVLVIPQT*QVYCCLSTFVC
Trigger: ACACACAAAGGTACTGAGGCAGCAGTATACTTGGCATGTTTGAGGAATAACAAGGACACTAGTTTGGAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 72 bp AGACCTCTCACTGCAGAGTTCAGAGTTATGAAGAGGTaGAAAGTACCATATGGGTCATTAAAAGTGATGGCA +
Preference number: 3 (lower is better)
Translates to: RPLTAEFRVMKR*KVPYGSLKVMA
Trigger: TGCCATCACTTTTAATGACCCATATGGTACTTTGCACCTCTTCATAACTCTGAACTCTGCAGTGAGAGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 72 bp GTAGGTTTATCACTTGGGCACCACATTTATTACTTCTaGCCAGATTGTGTAACCAGGATTCCAATCTCCTCT +
Preference number: 3 (lower is better)
Translates to: VGLSLGHHIYYF*PDCVTRIPISS
Trigger: AGAGGAGATTGGAATCCTGGTTACACAATCTGGGCAGAAGTAATAAATGTGGTGCCCAAGTGATAAACCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp TATTTCTATGACAAGGAAATGCTGGTCCTTCCAGTGTaGAAGGGGCCCAATGTAACCAACTTGATATTGAAG +
Preference number: 3 (lower is better)
Translates to: YFYDKEMLVLPV*KGPNVTNLILK
Trigger: CTTCAATATCAAGTTGGTTACATTGGGCCCCTTCCACACTGGAAGGACCAGCATTTCCTTGTCATAGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATCAGTATTGCCTGCTTaGTACAAATGGAAGAAAATG +
Preference number: 3 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLSVLPA*YKWKKM
Trigger: CATTTTCTTCCATTTGTACAAAGCAGGCAATACTGA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAAGCCAGTTAGTTTATTaGGCTAAGACTGTAAGACTA +
Preference number: 3 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLSQLVY*AKTVRL
Trigger: TAGTCTTACAGTCTTAGCCAAATAAACTAACTGGCT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATTCACATATCTTGGGTTaGGCTGGCCATCAGCCAATC +
Preference number: 3 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNSHILG*AGHQPI
Trigger: GATTGGCTGATGGCCAGCCAAACCCAAGATATGTGA...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATAATCATTCACATATCTaGGGTTTGGCTGGCCATCAG +
Preference number: 3 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHNHSHI*GLAGHQ
Trigger: CTGATGGCCAGCCAAACCCAAGATATGTGAATGATT...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATGATAATTGCTTGAACTaGGGAGGTGGAGGTTGTAGT +
Preference number: 3 (lower is better)
Translates to: IFFLALTTSACYSHHLDNDNCLN*GGGGCS
Trigger: ACTACAACCTCCACCTCCCAAGTTCAAGCAATTATC...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAAGGACAAATACCAGTTaGGCTACTTGGACTATTAAA +
Preference number: 3 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLRTNTS*ATWTIK
Trigger: TTTAATAGTCCAAGTAGCCAAACTGGTATTTGTCCT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTTGTACCTTCAGCAGGTaGTTCCAATGTTCTATCAAG +
Preference number: 3 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSCTFSR*FQCSIK
Trigger: CTTGATAGAACATTGGAACAACCTGCTGAAGGTACA...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp TCCTATCACTCACCTGTAAAGCCAACAATAGCAGGTTaGGTTCTTCTCATTTCACATCATTCTGACATCCTC +
Preference number: 3 (lower is better)
Translates to: SYHSPVKPTIAG*VLLISHHSDIL
Trigger: GAGGATGTCAGAATGATGTGAAATGAGAAGAACTCAACCTGCTATTGTTGGCTTTACAGGTGAGTGATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp GGACTTGGTGCTTTCTATGCACTGAAATTCATATGTTaGAGCCCTAAACCTCAATGTGCTAGATTTGGAGGT +
Preference number: 3 (lower is better)
Translates to: GLGAFYALKFIC*SPKPQCARFGG
Trigger: ACCTCCAAATCTAGCACATTGAGGTTTAGGGCTTCAACATATGAATTTCAGTGCATAGAAAGCACCAAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 72 bp ATTTCATTTTCCTCTCAACTTCTAATCTCCCACTGGTaGTTCCCATTTGTTGAACCCAACCAAAAGCAAGAG +
Preference number: 3 (lower is better)
Translates to: ISFSSQLLISHW*FPFVEPNQKQE
Trigger: CTCTTGCTTTTGGTTGGGTTCAACAAATGGGAAGCACCAGTGGGAGATTAGAAGTTGAGAGGAAAATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp TGGCTGGTGGCCTTCAATGTAGGGTCAGTAAGTGTTTaGTTAAAGTTTTCACTAGGGTCTTTTAATTGTCAG +
Preference number: 3 (lower is better)
Translates to: WLVAFNVGSVSV*LKFSLGSFNCQ
Trigger: CTGACAATTAAAAGACCCTAGTGAAAACTTTAACCAAACACTTACTGACCCTACATTGAAGGCCACCAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp TCTTCTACTCTCTTTGCATCTACCCCTAGGAATAAATaGGTTCCAAGACCCATTTATTCTTCATATTGGGGC +
Preference number: 3 (lower is better)
Translates to: SSTLFASTPRNK*VPRPIYSSYWG
Trigger: GCCCCAATATGAAGAATAAATGGGTCTTGGAACCCATTTATTCCTAGGGGTAGATGCAAAGAGAGTAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACGGTGCTTCCCATTTGTaGAACCCAACCAAAAGCAAG +
Preference number: 3 (lower is better)
Translates to: AREINNIISFSSQLLISHGASHL*NPTKSK
Trigger: CTTGCTTTTGGTTGGGTTCAACAAATGGGAAGCACC...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACTCACATATCTTGGGTTaGGCTGGCCATCAGCCAATC +
Preference number: 3 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYSHILG*AGHQPI
Trigger: GATTGGCTGATGGCCAGCCAAACCCAAGATATGTGA...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATGCCAACAATAGCAGGTaGAGTTCTTCTCATTTCACA +
Preference number: 3 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHANNSR*SSSHFT
Trigger: TGTGAAATGAGAAGAACTCAACCTGCTATTGTTGGC...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATCTGTTACAAGCTCTATaGCCTTTCCTCTTAAGGTTT +
Preference number: 3 (lower is better)
Translates to: IFFLALTTSACYSHHLDNLLQAL*PFLLRF
Trigger: AAACCTTAAGAGGAAAGGCAATAGAGCTTGTAACAG...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTCTAGACTTTCTGTGCTaGATCTTCCAGTATTTATTC +
Preference number: 3 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSLDFLC*IFQYLF
Trigger: GAATAAATACTGGAAGATCAAGCACAGAAAGTCTAG...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp GAGCAGTTCCTAAAGGAATCAAGAGACCTCTTTTCTTaGCCTCTCAGAAATTTAGAAGATGGGAGATTAGTG +
Preference number: 3 (lower is better)
Translates to: EQFLKESRDLFS*PLRNLEDGRLV
Trigger: CACTAATCTCCCATCTTCTAAATTTCTGAGAGGTCAAGAAAAGAGGTCTCTTGATTCCTTTAGGAACTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp ATTCCTTGCAACTGGGAGGTCAGTCCTTTCTTAAAGTaGATCAGGCAGTGTATCTCTTTGCTTATTACAATC +
Preference number: 3 (lower is better)
Translates to: IPCNWEVSPFLK*IRQCISLLITI
Trigger: GATTGTAATAAGCAAAGAGATACACTGCCTGATTCACTTTAAGAAAGGACTGACCTCCCAGTTGCAAGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp TTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTaGAATTCATATGTTGAAGCCCTAAACCTCAATGTG +
Preference number: 3 (lower is better)
Translates to: FSLSEDLVLSMH*NSYVEALNLNV
Trigger: CACATTGAGGTTTAGGGCTTCAACATATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 72 bp CAAATGCAAACTGATAAATTACTGTGTAGCACTTGCTaGTGTTTCATGAAAAGCCATGAAGAGACACTGCCA +
Preference number: 3 (lower is better)
Translates to: QMQTDKLLCSTC*CFMKSHEETLP
Trigger: TGGCAGTGTCTCTTCATGGCTTTTCATGAAACAGCAGCAAGTGCTACACAGTAATTTATCAGTTTGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 72 bp TTAGAAGGTTCAAGTTCTCTTTGTCTGAGGACTTGGTaGTTTCTATGCACTGAAATTCATATGTTGAAGCCC +
Preference number: 3 (lower is better)
Translates to: LEGSSSLCLRTW*FLCTEIHMLKP
Trigger: GGGCTTCAACATATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACCTTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp ATATTTGAAGGATTTCACCAAGTGTCTAGTGATGTTTaGCTCTTATGTATGGGTGGTGATTTTTGGCTGGTG +
Preference number: 3 (lower is better)
Translates to: IFEGFHQVSSDV*LLCMGGDFWLV
Trigger: CACCAGCCAAAAATCACCACCCATACATAAGAGCCAAACATCACTAGACACTTGGTGAAATCCTTCAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTATGACTCTGCTGATCTaGGCTGGAATCATTCACATA +
Preference number: 3 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLMTLLI*AGIIHI
Trigger: TATGTGAATGATTCCAGCCAAGATCAGCAGAGTCAT...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATAGGACAAATACCAGTTaGGCTACTTGGACTATTAAA +
Preference number: 3 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHRTNTS*ATWTIK
Trigger: TTTAATAGTCCAAGTAGCCAAACTGGTATTTGTCCT...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATTGTACCTTCAGCAGGTaGTTCCAATGTTCTATCAAG +
Preference number: 3 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNCTFSR*FQCSIK
Trigger: CTTGATAGAACATTGGAACAACCTGCTGAAGGTACA...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATTCCTCCAGTAAGAGTTaGTTCACTATTCTTCAAGGC +
Preference number: 3 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNSSSKS*FTILQG
Trigger: GCCTTGAAGAATAGTGAACAAACTCTTACTGGAGGA...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp GAAGAGCAATTTACCCAGCAGCTTTTTCTAGTCCATTaGTCCAAGTTTTTCAGACAGTTAACTTCACAAACC +
Preference number: 3 (lower is better)
Translates to: EEQFTQQLFLVH*SKFFRQLTSQT
Trigger: GGTTTGTGAAGTTAACTGTCTGAAAAACTTGGATCAATGGACTAGAAAAAGCTGCTGGGTAAATTGCTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp CGTAATACAGAGACCTTCACAGTTCATGTACATACTTaGCACAAGTATGTCCATTCACATGCCTCTATTCTA +
Preference number: 3 (lower is better)
Translates to: RNTETFTVHVHT*HKYVHSHASIL
Trigger: TAGAATAGAGGCATGTGAATGGACATACTTGTGTCAAGTATGTACATGAACTGTGAAGGTCTCTGTATTACG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp TGGATATCTCTAGAAGGATATCCTGGAATTCTAATATaGAGGTTCAGGAGAGTGAAAGTGAAAACTGCCAGA +
Preference number: 3 (lower is better)
Translates to: WISLEGYPGILI*RFRRVKVKTAR
Trigger: TCTGGCAGTTTTCACTTTCACTCTCCTGAACCTTCATATTAGAATTCCAGGATATCCTTCTAGAGATATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp ATAATTGATCCAGTACATACTCTGTATCTTGGAGTATaGCATCCTATCCTTGTAGAATTTGCCTATGAGCTG +
Preference number: 3 (lower is better)
Translates to: IIDPVHTLYLGV*HPILVEFAYEL
Trigger: CAGCTCATAGGCAAATTCTACAAGGATAGGATGCCATACTCCAAGATACAGAGTATGTACTGGATCAATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp GTCCCTAGAGATATGGATATCTCTAGAAGGATATCCTaGAATTCTAATATGAAGGTTCAGGAGAGTGAAAGT +
Preference number: 3 (lower is better)
Translates to: VPRDMDISRRIS*NSNMKVQESES
Trigger: ACTTTCACTCTCCTGAACCTTCATATTAGAATTCCAGGATATCCTTCTAGAGATATCCATATCTCTAGGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp GAGTTAGAAGGTTCAAGTTCTCTTTGTCTGAGGACTTaGTGCTTTCTATGCACTGAAATTCATATGTTGAAG +
Preference number: 3 (lower is better)
Translates to: ELEGSSSLCLRT*CFLCTEIHMLK
Trigger: CTTCAACATATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACCTTCTAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACATGACTCTGCTGATCTaGGCTGGAATCATTCACATA +
Preference number: 3 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYMTLLI*AGIIHI
Trigger: TATGTGAATGATTCCAGCCAAGATCAGCAGAGTCAT...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp TTCTTCATATTGGGGCACATGCTATATAAGGATAATTaGTCCAGTACATACTCTGTATCTTGGAGTATGGCA +
Preference number: 3 (lower is better)
Translates to: FFILGHMLYKDN*SSTYSVSWSMA
Trigger: TGCCATACTCCAAGATACAGAGTATGTACTGGATCAATTATCCTTATATAGCATGTGCCCCAATATGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp TTCAGAACCTTTAATATGTTTTGCCTTCTGAATCCCTaGGAGGGAAACAACGTAATGTACAGCAAACTAATT +
Preference number: 3 (lower is better)
Translates to: FRTFNMFCLLNP*EGNNVMYSKLI
Trigger: AATTAGTTTGCTGTACATTACGTTGTTTCCCTCCCAGGGATTCAGAAGGCAAAACATATTAAAGGTTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTTCAGTATTGCCTGCTTaGTACAAATGGAAGAAAATG +
Preference number: 3 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLSVLPA*YKWKKM
Trigger: CATTTTCTTCCATTTGTACAAAGCAGGCAATACTGA...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGCTTTTTCTAGTCCATaGATCCAAGTTTTTCAGACA +
Preference number: 3 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNAFSSP*IQVFQT
Trigger: TGTCTGAAAAACTTGGATCAATGGACTAGAAAAAGC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATAGTTCATGTACATACTaGACACAAGTATGTCCATTC +
Preference number: 3 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNSSCTY*TQVCPF
Trigger: GAATGGACATACTTGTGTCAAGTATGTACATGAACT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATAAACTCTTTGATTTTTaGCTTCCCATGGGCATTAAG +
Preference number: 3 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNKLFDF*LPMGIK
Trigger: CTTAATGCCCATGGGAAGCAAAAAATCAAAGAGTTT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATAGGCTAGATAATCTTTaGGGAATTATCTATAGCACC +
Preference number: 3 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNRLDNL*GIIYST
Trigger: GGTGCTATAGATAATTCCCAAAAGATTATCTAGCCT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR-3UTR CAA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACCATAATAGACATTCCTaGCTCACATGTTTGGAATCA +
Preference number: 3 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYHNRHS*LTCLES
Trigger: TGATTCCAAACATGTGAGCAAGGAATGTCTATTATG...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp ATACCAGTTTGGCTACTTGGACTATTAAATTCTAGATaGGATTTGTATGCAACCAAAGAAGCCCTCTTTCTA +
Preference number: 3 (lower is better)
Translates to: IPVWLLGLLNSR*DLYATKEALFL
Trigger: TAGAAAGAGGGCTTCTTTGGTTGCATACAAATCTCATCTAGAATTTAATAGTCCAAGTAGCCAAACTGGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 72 bp AGTGTCCTTGTTATTCCTCAAACATGCCAAGTATACTaGTGCCTCAGTACCTTTGTGTGTATATATATATAT +
Preference number: 3 (lower is better)
Translates to: SVLVIPQTCQVY*CLSTFVCIYIY
Trigger: ATATATATATATACACACAAAGGTACTGAGGCAGCAGTATACTTGGCATGTTTGAGGAATAACAAGGACACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 72 bp CTTAGCTGGCAGCTTCTTGCCACATGTATTATAGTGTaGTTAAGCAACACAATTTATTCTTATATAGTTCTG +
Preference number: 3 (lower is better)
Translates to: LSWQLLATCIIV*LSNTIYSYIVL
Trigger: CAGAACTATATAAGAATAAATTGTGTTGCTTAAGCACACTATAATACATGTGGCAAGAAGCTGCCAGCTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR TCA 72 bp AGCTCAAAATTAAGGCAATGGGTATGGAAATGGAACTaGAATGAAATACATAACCTAGGATATGCAGAACTA +
Preference number: 3 (lower is better)
Translates to: SSKLRQWVWKWN*NEIHNLGYAEL
Trigger: TAGTTCTGCATATCCTAGGTTATGTATTTCATTTCAGTTCCATTTCCATACCCATTGCCTTAATTTTGAGCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR GCA 72 bp GTTCACTCAGTAAATGTCTTCCTGTACATTATGAGATaGAGCCATAATAAGTTCATCAGTACTTTCAACATT +
Preference number: 3 (lower is better)
Translates to: VHSVNVFLYIMR*SHNKFISTFNI
Trigger: AATGTTGAAAGTACTGATGAACTTATTATGGCTGCATCTCATAATGTACAGGAAGACATTTACTGAGTGAAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CCA 72 bp AATAAATGGGTTCCAAGACCCATTTATTCTTCATATTaGGGCACATGCTATATAAGGATAATTGATCCAGTA +
Preference number: 3 (lower is better)
Translates to: NKWVPRPIYSSY*GTCYIRIIDPV
Trigger: TACTGGATCAATTATCCTTATATAGCATGTGCCCCAATATGAAGAATAAATGGGTCTTGGAACCCATTTATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTTCCTCATGACGCTCGGTCTCAGTTGAAACTACCTTCCCTCTCCCTAGGGTCTACGCTCGGTCTCAGTTaGAACTACCTTCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: FPHDARSQLKLPSLSLGSTLGLS*NYLPSP
Trigger: GGGAGAGGGAAGGTAGTTTCAACTGAGACCGAGCGT...AGACCCTAGGGAGAGGGAAGGTAGTTTCAACTGAGACCGAGCGTCATGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557968.5
CDS-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACTGAGATCGCACCACTaGACTGCAGCCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPLRSHH*TAAWET
Trigger: TGTCTCCCAGGCTGCAGTGCAGTGGTGCGATCTCAG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACTCAGGCGATCCACCTaGCTTGGCCTCCTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPLRRST*LGLLKC
Trigger: GCACTTTAGGAGGCCAAGGCAGGTGGATCGCCTGAG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACCGCGCCTGGCCTGCTaGCTTCTTAATGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPPRLAC*LLNALF
Trigger: AAAGAGAGCATTAAGAAGTCAGCAGGCCAGGCGCGG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTTCCTCATGACGCTCGGTCTCAGTTGAAACTACCTTCCCTCTCCCTAGGGTCTTGTGATTTTAGATGCTaGGGAGACCATGGACTGGCC +
Preference number: 4 (lower is better)
Translates to: FPHDARSQLKLPSLSLGSCDFRC*GDHGLA
Trigger: GGCCAGTCCATGGTCTCCTCAGCATCTAAAATCACA...AGACCCTAGGGAGAGGGAAGGTAGTTTCAACTGAGACCGAGCGTCATGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557968.5
CDS-3UTR TCA 90 bp CGGTCTCAGTTGAAACTACCTTCCCTCTCCCTAGGGTCTCTGAGCACCACATCAATCAGAGTTTCCTCATaGCGCTCGGTCTCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: RSQLKLPSLSLGSLSTTSIRVSS*RSVSVE
Trigger: TTCAACTGAGACCGAGCGTCATGAGGAAACTCTGAT...TGATGTGGTGCTCAGAGACCCTAGGGAGAGGGAAGGTAGTTTCAACTGAGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557968.5
CDS-3UTR GCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGCTCAGGCGATCCACCTaGCTTGGCCTCCTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLLRRST*LGLLKC
Trigger: GCACTTTAGGAGGCCAAGGCAGGTGGATCGCCTGAG...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAAGGAAGATGGCTGTCTaGAAACCAGGAAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPRKMAV*KPGRER
Trigger: GCGCTCCCTTCCTGGTTTGCAGACAGCCATCTTCCT...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACACTGCACTGCAGCCTaGGAGACAAGAGTGAGACTC +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPHCTAA*ETRVRL
Trigger: GAGTCTCACTCTTGTCTCCCAGGCTGCAGTGCAGTG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 72 bp CATGAAGAGACACTGCCAATCATGTGGCAAGTACACTaGCTTGGCCACAGAGTACGCTTCTGGACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: HEETLPIMWQVH*LGHRVRFWTGK
Trigger: CTTGCCTGTCCAGAAGCGTACTCTGTGGCCAAGCAAGTGTACTTGCCACATGATTGGCAGTGTCTCTTCATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 72 bp TGGCACGGAGGGGAGGCACCTCTTCTTCTACTCTCTTaGCATCTACCCCTAGGAATAAATGGGTTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: WHGGEAPLLLLS*HLPLGINGFQD
Trigger: GTCTTGGAACCCATTTATTCCTAGGGGTAGATGCAAAGAGAGTAGAAGAAGAGGTGCCTCCCCTCCGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 72 bp ACTACATCAGAGTTTCCTCATGACGCTCGGTCTCAGTaGAAACTACCTTCCCTCTCCCTAGGGTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: TTSEFPHDARSQ*KLPSLSLGSLS
Trigger: GCTCAGAGACCCTAGGGAGAGGGAAGGTAGTTTCAACTGAGACCGAGCGTCATGAGGAAACTCTGATGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557968.5
CDS-3UTR TCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGCCGCGCCTGGCCTGCTaGCTTCTTAATGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLPRLAC*LLNALF
Trigger: AAAGAGAGCATTAAGAAGTCAGCAGGCCAGGCGCGG...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCATGCTACCACCTCTGCTaGTCCTGGTGGTTTATCTGG +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPCYHLC*SWWFIW
Trigger: CCAGATAAACCACCAGGAGCAGCAGAGGTGGTAGCA...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATGCTTGCTGCTGCAGTaGGGCTTGGGAATGCCATCA +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLCLLLQ*GLGMPS
Trigger: TGATGGCATTCCCAAGCCCCACTGCAGCAGCAAGCA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 72 bp TCAGGGTCCCCCTACACCAAAGGAAGAGGCTATTCCTaGATTGTGGTTCAGTTCATCCCTCTGGTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: SGSPYTKGRGYS*IVVQFIPLVVV
Trigger: AACCACTACCAGAGGGATGAACTGAACCACAATCAAGGAATAGCCTCTTCCTTTGGTGTAGGGGGACCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTCTGAGATCGCACCACTaGACTGCAGCCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSLRSHH*TAAWET
Trigger: TGTCTCCCAGGCTGCAGTGCAGTGGTGCGATCTCAG...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGTGGGACAAATTACAGTaGTTGCTGCTGCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLWDKLQ*LLLQWG
Trigger: GCCCCACTGCAGCAGCAAGCACTGTAATTTGTCCCA...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACAACTGATGATGACATaGCAGGAAAGGAGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPQLMMT*QERSQG
Trigger: TCCCTGGCTCCTTTCCTGCCATGTCATCATCAGTTG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACTGAATGCTCTCTGGTaGGCACTGCACGTAATACAG +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPLNALW*ALHVIQ
Trigger: CTGTATTACGTGCAGTGCCCACCAGAGAGCATTCAG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGCTGTGTACTGGCTGGTaGTTCTTCAGCTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLLCTGW*FFSSRW
Trigger: CCATCTGGAGCTGAAGAACCACCAGCCAGTACACAG...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 72 bp CTTTGCTTTTTCCAGCTTCCAGAGGCTGCTTGGGGCTaGTGGTTCCTATCACTCACCTGTAAAGCCAACAAT +
Preference number: 4 (lower is better)
Translates to: LCFFQLPEAAWG*WFLSLTCKANN
Trigger: ATTGTTGGCTTTACAGGTGAGTGATAGGAACCACAAGCCCCAAGCAGCCTCTGGAAGCTGGAAAAAGCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAGAGGTCCAGGAAAAATaGGTGCAACTTCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPEVQEK*VQLHGP
Trigger: AGGACCATGAAGTTGCACTCATTTTTCCTGGACCTC...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACTTTCTTATGCCAGCTaGGAGATGGAGGCAAATGAG +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPLSYAS*EMEANE
Trigger: CTCATTTGCCTCCATCTCTCAGCTGGCATAAGAAAG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTTCCTCATGACGCTCGGTCTCAGTTGAAACTACCTTCCCTCTCCCTAGGGTCTATGGACTGGCCAAGATaGTATAGGCTAAACTTCACA +
Preference number: 4 (lower is better)
Translates to: FPHDARSQLKLPSLSLGSMDWPR*YRLNFT
Trigger: TGTGAAGTTTAGCCTATATCATCTTGGCCAGTCCAT...AGACCCTAGGGAGAGGGAAGGTAGTTTCAACTGAGACCGAGCGTCATGAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557968.5
CDS-3UTR GCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATACTCTGCTACCACCTCTaGTGCTCCTGGTGGTTTATC +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVILCYHL*CSWWFI
Trigger: GATAAACCACCAGGAGCAGCAGAGGTGGTAGCAGAG...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATATGGGACAAATTACAGTaGTTGCTGCTGCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVIWDKLQ*LLLQWG
Trigger: GCCCCACTGCAGCAGCAAGCACTGTAATTTGTCCCA...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCATGCCTTCTGAATCCCTaGGAGGGAAACAACGTAATG +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPCLLNP*EGNNVM
Trigger: CATTACGTTGTTTCCCTCCCAGGGATTCAGAAGGCA...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGCAAGTACACTTGCTTaGCCACAGAGTACGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLASTLA*PQSTLL
Trigger: CAGAAGCGTACTCTGTGGCCAAGCAAGTGTACTTGC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGTGTGCTAGCACTGGGTaGCGAATAACTGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLCASTG*RITEAG
Trigger: TCCTGCTTCAGTTATTCGCCACCCAGTGCTAGCACA...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCATTCTTCAGCTCCAGATaGTGTTACCCAGGGTCACTT +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPFFSSR*CYPGSL
Trigger: AAGTGACCCTGGGTAACACCATCTGGAGCTGAAGAA...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp AACACTACATCAGAGTTTCCTCATGACGCTCGGTCTCAGTTGAAACTACCTTCCACCCCTGGAGGACCTTaGCCTACAAATGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: NTTSEFPHDARSQLKLPSTPGGP*PTNEFL
Trigger: GAGGAATTCATTTGTAGGCCAAGGTCCTCCAGGGGT...GGAAGGTAGTTTCAACTGAGACCGAGCGTCATGAGGAAACTCTGATGTAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557968.5
CDS-3UTR TCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCATGGGGTGGACTAATCTaGTATAAAGGCTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPWGGLI*YKGSQS
Trigger: ACTCTGTGAGCCTTTATATCAGATTAGTCCACCCCA...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAATCTCAGGGAAAAGATaGGAAAAGCCGAACGTGCCA +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLISGKR*EKPNVP
Trigger: TGGCACGTTCGGCTTTTCTCATCTTTTCCCTGAGAT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp CAATGGAAGCATAATGTAAAATCAGCAGGATCCCTGAGCTGGTTTTCCTGCAACAATCAGCAGGATCCCTaGGCTGGTTTTCCTGCAACT +
Preference number: 4 (lower is better)
Translates to: QWKHNVKSAGSLSWFSCNNQQDP*AGFPAT
Trigger: AGTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATT...GTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATTATGCTTCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557988.5
CDS-3UTR TCA 90 bp TTCCCTCTCCCTAGGGTCTCTGAGCACCACATCAGTATTATCCTCAAGTTCTTGCAGTCTACTTCTGGCTaGACACTACATCAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: FPLPRVSEHHISIILKFLQSTSG*TLHQSF
Trigger: GAAACTCTGATGTAGTGTTCAGCCAGAAGTAGACTG...CAAGAACTTGAGGATAATACTGATGTGGTGCTCAGAGACCCTAGGGAGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557968.5
CDS-3UTR TCA 90 bp CGGTCTCAGTTGAAACTACCTTCCCTCTCCCTAGGGTCTCTGAGCACCACATCAACCTTGGCCTACAAATaGATTCCTCAAATAGTTTTC +
Preference number: 4 (lower is better)
Translates to: RSQLKLPSLSLGSLSTTSTLAYK*IPQIVF
Trigger: GAAAACTATTTGAGGAATTCATTTGTAGGCCAAGGT...TGATGTGGTGCTCAGAGACCCTAGGGAGAGGGAAGGTAGTTTCAACTGAGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557968.5
CDS-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAGGTAACTGGGGTAACTaGTTGGGAACAGAAGAGATA +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPGNWGN*LGTEEI
Trigger: TATCTCTTCTGTTCCCAAGCAGTTACCCCAGTTACC...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAGCTTTGGCTCATCTCTaGAATCCAGCTAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPALAHL*NPARNS
Trigger: TGAGTTTCTAGCTGGATTGCAGAGATGAGCCAAAGC...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCATCTATGACAAGGAAATaGTGGTCCTTCCAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPSMTRK*WSFQCG
Trigger: TCCACACTGGAAGGACCAGCATTTCCTTGTCATAGA...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTTGCTACCACCTCTGCTaGTCCTGGTGGTTTATCTGG +
Preference number: 4 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSCYHLC*SWWFIW
Trigger: CCAGATAAACCACCAGGAGCAGCAGAGGTGGTAGCA...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATAGGAAGATGGCTGTCTaGAAACCAGGAAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNRKMAV*KPGRER
Trigger: GCGCTCCCTTCCTGGTTTGCAGACAGCCATCTTCCT...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTACCATGCTATTTAAACTaGCACCCCTTTCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLPCYLN*HPFPAP
Trigger: TGGTGCAGGAAAGGGGTGCCAGTTTAAATAGCATGG...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATATGTGCTAGCACTGGGTaGCGAATAACTGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVICASTG*RITEAG
Trigger: TCCTGCTTCAGTTATTCGCCACCCAGTGCTAGCACA...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CAATGGAAGCATAATGTAAAATCAGCAGGATCCCTGAGCTGGTTTTCCTGCAACGCAGGATCCCTGAGCTaGTTTTCCTGCAACTTGATG +
Preference number: 4 (lower is better)
Translates to: QWKHNVKSAGSLSWFSCNAGSLS*FSCNLM
Trigger: CATCAAGTTGCAGGAAAACCAGCTCAGGGATCCTGC...GTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATTATGCTTCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557988.5
CDS-3UTR TCA 90 bp CAATGGAAGCATAATGTAAAATCAGCAGGATCCCTGAGCTGGTTTTCCTGCAACGAGGTCCAGGAAAAATaGGTGCAACTTCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: QWKHNVKSAGSLSWFSCNEVQEK*VQLHGP
Trigger: AGGACCATGAAGTTGCACTCATTTTTCCTGGACCTC...GTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATTATGCTTCCATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557988.5
CDS-3UTR TCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGTGCTTCCCATTTGTTaGACCCAACCAAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLVLPIC*TQPKAR
Trigger: TCTTGCTTTTGGTTGGGTTCAACAAATGGGAAGCAC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCATCTGGACAGGCAAGATaGAAAACAGTGTCTCTATAC +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPSGQAR*KTVSLY
Trigger: GTATAGAGACACTGTTTTTCATCTTGCCTGTCCAGA...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAAATGGTGATACTGACTaGGGCTCTGCAAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLNGDTD*GSAKRK
Trigger: TTTCCTCTTTGCAGAGCCTCAGTCAGTATCACCATT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACTAAATCTCTTCTGCTaGAGCCTTCCAGACCTTTAT +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPLNLFC*SLPDLY
Trigger: ATAAAGGTCTGGAAGGCTGCAGCAGAAGAGATTTAG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTATCCATTGCTCTCCTTaGTTCTTGGCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSIHCSP*FLAPPS
Trigger: AGAGGGAGGAGCCAAGAAGCAAGGAGAGCAATGGAT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CAATGGAAGCATAATGTAAAATCAGCAGGATCCCTGAGCTGGTTTTCCTGCAACCTGAGCTGGTTTTCCTaGAACTTGATGGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: QWKHNVKSAGSLSWFSCNLSWFS*NLMVPS
Trigger: AGATGGGACCATCAAGTTGCAGGAAAACCAGCTCAG...GTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATTATGCTTCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557988.5
CDS-3UTR CCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATCATCCTTTCCACAGTaGACATTCCATTCATGTGCC +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLSSFPQ*TFHSCA
Trigger: GGCACATGAATGGAATGTCCACTGTGGAAAGGATGA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATACTTGACTCCTTTTATTaGCTGCTGCTCCCTAGACAG +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVILDSFY*LLLPRQ
Trigger: CTGTCTAGGGAGCAGCAGCCAATAAAAGGAGTCAAG...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTACTCATTCCTTGCAACTaGGAGGTCAGTCCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLLIPCN*EVSPFL
Trigger: TAAGAAAGGACTGACCTCCCAGTTGCAAGGAATGAG...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATGCTCTCCTTGCTTCTTaGCTCCTCCCTCTGGGATTT +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHALLAS*LLPLGF
Trigger: AAATCCCAGAGGGAGGAGCCAAGAAGCAAGGAGAGC...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CAATGGAAGCATAATGTAAAATCAGCAGGATCCCTGAGCTGGTTTTCCTGCAACGTCCCATCTAGGACATaGGAGACAGTGACAGATCTT +
Preference number: 4 (lower is better)
Translates to: QWKHNVKSAGSLSWFSCNVPSRT*ETVTDL
Trigger: AAGATCTGTCACTGTCTCCCATGTCCTAGATGGGAC...GTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATTATGCTTCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557988.5
3UTR CAA 72 bp GAATGGTATTATATCAGGGGTGCAGTATTGTCTGTGTaGCTTGTAGGTTGGACATTCAACAGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EWYYIRGAVLSV*LVGWTFNSSSS
Trigger: GCTGCTGCTGCTGTTGAATGTCCAACCTACAAGCAACACAGACAATACTGCACCCCTGATATAATACCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 72 bp GTCCTTCCAGTGTGGAAGGGGCCCAATGTAACCAACTaGATATTGAAGAATGGTATTATATCAGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VLPVWKGPNVTN*ILKNGIISGVQ
Trigger: CTGCACCCCTGATATAATACCATTCTTCAATATCAAGTTGGTTACATTGGGCCCCTTCCACACTGGAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 72 bp GCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTaGTTCCAATGTTCTATCAAGCTGACAAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: AYELVFSCTFSR*FQCSIKLTNSK
Trigger: CTTGGAATTTGTCAGCTTGATAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATTTCACCCAAACAGGTaGATTTATCAGAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLFHPNR*IYQSPQ
Trigger: TTGGGGACTCTGATAAATTCACCTGTTTGGGTGAAA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATCTGGACAGGCAAGATaGAAAACAGTGTCTCTATAC +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLSGQAR*KTVSLY
Trigger: GTATAGAGACACTGTTTTTCATCTTGCCTGTCCAGA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAATTCATGGTATTTGGTaGTGTTTCGAGGCTCTTAGG +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLIHGIW*CFEALR
Trigger: CCTAAGAGCCTCGAAACATCACCAAATACCATGAAT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGTGGATGAATGAATCCTaGAACCCTGAAACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLWMNES*NPETSL
Trigger: AAGGGAAGTTTCAGGGTTTCAGGATTCATTCATCCA...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCATTGTGTCTATTTCTATaGCAAGGAAATGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPLCLFL*QGNAGP
Trigger: AGGACCAGCATTTCCTTGTCATAGAAATAGACACAA...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATATGGACTCTACCCTCTaGAGAGAGGAGTCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNMDSTL*REESKE
Trigger: TTCCTTGGACTCCTCTCTTCAGAGGGTAGAGTCCAT...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTATCTCAGGGAAAAGATaGGAAAAGCCGAACGTGCCA +
Preference number: 4 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSISGKR*EKPNVP
Trigger: TGGCACGTTCGGCTTTTCTCATCTTTTCCCTGAGAT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGCTGTGTAGCACTTGCTaGTGTTTCATGAAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLLCSTC*CFMKSH
Trigger: ATGGCTTTTCATGAAACAGCAGCAAGTGCTACACAG...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCATTACTGTGTAGCACTTaGTGCTGTTTCATGAAAAGC +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPLLCST*CCFMKS
Trigger: GCTTTTCATGAAACAGCAGCAAGTGCTACACAGTAA...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTACTAAGGCATGATAATTaGTTGAACTTGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLLRHDN*LNLGGG
Trigger: TCCACCTCCCAAGTTCAAGCAATTATCATGCCTTAG...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAAGTGGGGCTTGGGAATaGCATCAATACTTGTCACAT +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVISGAWE*HQYLSH
Trigger: ATGTGACAAGTATTGATGGCATTCCCAAGCCCCACT...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTACCTGGCAGCAGAGATaGCCACTAGCAGGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLTWQQR*PLAGRL
Trigger: AAGCCTACCTGCTAGTGGCCATCTCTGCTGCCAGGT...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACACCTGGCAGCAGAGATaGCCACTAGCAGGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHTWQQR*PLAGRL
Trigger: AAGCCTACCTGCTAGTGGCCATCTCTGCTGCCAGGT...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTTGCCTTCTGAATCCCTaGGAGGGAAACAACGTAATG +
Preference number: 4 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSCLLNP*EGNNVM
Trigger: CATTACGTTGTTTCCCTCCCAGGGATTCAGAAGGCA...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATGACCCAGAATCACAGTaGGGGGAGTACTTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHDPESQ*GEYFKG
Trigger: TCCTTTGAAGTACTCCCCCCACTGTGATTCTGGGTC...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAGGACTGCCATTAACATaGCCTCAAAGAAAAGAACAA +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPGLPLT*PQRKEQ
Trigger: TTGTTCTTTTCTTTGAGGCCATGTTAATGGCAGTCC...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGTTTGGCTCTTATGTATaGGTGGTGATTTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLFGSYV*VVIFGW
Trigger: CCAGCCAAAAATCACCACCCATACATAAGAGCCAAA...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAAGAGGAATGCTGAGATaGAGTTTGGGGTGTAAGATG +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVIRGMLR*SLGCKM
Trigger: CATCTTACACCCCAAACTCCATCTCAGCATTCCTCT...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAACATACTCTGTATCTTaGAGTATGGCATCCTATCCT +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPTYSVS*SMASYP
Trigger: AGGATAGGATGCCATACTCCAAGATACAGAGTATGT...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACCTTTCTGGACACTCTaGAAAGAATCTGTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPPFWTL*KESVSL
Trigger: CAAAGAAACAGATTCTTTCCAGAGTGTCCAGAAAGG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTACTTTGGGAAGTAATTTaGTTCCAAGAAGCCATGAGG +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLLWEVI*FQEAMR
Trigger: CCTCATGGCTTCTTGGAACCAAATTACTTCCCAAAG...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 72 bp TTTTTCCCTCCCACACACTGTTCCAAACTAGTGTCCTaGTTATTCCTCAAACATGCCAAGTATACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: FFPPTHCSKLVS*LFLKHAKYTAA
Trigger: GGCAGCAGTATACTTGGCATGTTTGAGGAATAACAAGGACACTAGTTTGGAACAGTGTGTGGGAGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 72 bp CTTTTGTTCCATGTGCCACATGTGATGGGATTCTCATaGGCAGCTCAGATCACTCCTACTAACAATTACCAC +
Preference number: 4 (lower is better)
Translates to: LLFHVPHVMGFS*AAQITPTNNYH
Trigger: GTGGTAATTGTTAGTAGGAGTGATCTGAGCTGCCAATGAGAATCCCATCACATGTGGCACATGGAACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp CAATGGAAGCATAATGTAAAATCAGCAGGATCCCTGAGCTGGTTTTCCTGCAACACTTGTAACAACCCTTaGAGTCGCTCATCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: QWKHNVKSAGSLSWFSCNTCNNP*SRSSVN
Trigger: ATTCACTGATGAGCGACTTCAAGGGTTGTTACAAGT...GTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATTATGCTTCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557988.5
CDS-3UTR TCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTGTGCTTCCCATTTGTTaGACCCAACCAAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSVLPIC*TQPKAR
Trigger: TCTTGCTTTTGGTTGGGTTCAACAAATGGGAAGCAC...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCATCAAGTGGGGACATTTaGGAAGAGTGTAATAAAACA +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPSSGDI*EECNKT
Trigger: TGTTTTATTACACTCTTCTCAAATGTCCCCACTTGA...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAAGAGATGGAGGCAAATaGGTGATAGAATTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLRDGGK*VIELFS
Trigger: AGAGAACAATTCTATCACTCATTTGCCTCCATCTCT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATCTTATGTATGGGTGGTaGTTTTTGGCTGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHLMYGW*FLAGGL
Trigger: AAGGCCACCAGCCAAAAATCACCACCCATACATAAG...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATGGCATGATAATTGCTTaGACTTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNGMIIA*TWEVEV
Trigger: AACCTCCACCTCCCAAGTTCAAGCAATTATCATGCC...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCATCCTCCTATTTTCTTTaGCTTTCTGAGAGATCTCTT +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPSSYFL*LSERSL
Trigger: AAGAGATCTCTCAGAAAGTCAAAGAAAATAGGAGGA...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTACTATCCACAGTGTTCTaGAATTCCTTGATGATAAGC +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLLSTVF*NSLMIS
Trigger: GCTTATCATCAAGGAATTTCAGAACACTGTGGATAG...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCTCCCAGGTTCTAAGTaGTTCTCCTGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNLPGSK*FSCFSL
Trigger: GAGGCTGAAGCAGGAGAATCACTTAGAACCTGGGAG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATACATTTCACATCATTCTaGCATCCTCTCATGTATCCG +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVIHFTSF*HPLMYP
Trigger: CGGATACATGAGAGGATGTCAGAATGATGTGAAATG...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATTTTATTGGTCAAAGTaGGTTAGAAGGCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLFYWSK*VRRPIQ
Trigger: CTGGATTGGCCTTCTAACTCACTTTGACCAATAAAA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATATGCAGGATATTAAGATaGCCTCTTTTCTTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVICRILR*PLFLSL
Trigger: GAGGCTCAAGAAAAGAGGGCATCTTAATATCCTGCA...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251250.7
CDS-3UTR GCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGTCCAGGAAAAATGAGTaGAACTTCATGGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLSRKNE*NFMVLF
Trigger: GAAAAGGACCATGAAGTTGCACTCATTTTTCCTGGA...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATGCCATGAAGAGACACTaGCAATCATGTGGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNAMKRH*QSCGKY
Trigger: GTACTTGCCACATGATTGGCAGTGTCTCTTCATGGC...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATCCTTTTATTGGCTGCTaGTCCCTAGACAGACACAAG +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHPFIGC*SLDRHK
Trigger: CTTGTGTCTGTCTAGGGAGCAGCAGCCAATAAAAGG...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATCTGCTGATCTTGGCTaGAATCATTCACATATCTTG +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLSADLG*NHSHIL
Trigger: CAAGATATGTGAATGATTCCAGCCAAGATCAGCAGA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACCACTGCACTGCAGCCTaGGAGACAAGAGTGAGACTC +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYHCTAA*ETRVRL
Trigger: GAGTCTCACTCTTGTCTCCCAGGCTGCAGTGCAGTG...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCACCTTCTCCGTTTTACTaGAAAACATCTTCAGTATTC +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPPSPFY*KTSSVF
Trigger: GAATACTGAAGATGTTTTCCAGTAAAACGGAGAAGG...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAGTGCAAAGTACCATATaGGTCATTAAAAGTGATGGC +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLVQSTI*VIKSDG
Trigger: GCCATCACTTTTAATGACCCATATGGTACTTTGCAC...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACTGCTTGCTGCTGCAGTaGGGCTTGGGAATGCCATCA +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYCLLLQ*GLGMPS
Trigger: TGATGGCATTCCCAAGCCCCACTGCAGCAGCAAGCA...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTGAAGGAGCTGACAGTTaGAGGCTGCTGACCTCATTC +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLEGADS*RLLTSF
Trigger: GAATGAGGTCAGCAGCCTCCAACTGTCAGCTCCTTC...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACCTTCCAGAGGCTGCTTaGGGCTTGTGGTTCCTATCA +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHLPEAA*GLWFLS
Trigger: TGATAGGAACCACAAGCCCCAAGCAGCCTCTGGAAG...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTCTTCCAGAGGCTGCTTaGGGCTTGTGGTTCCTATCA +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLLPEAA*GLWFLS
Trigger: TGATAGGAACCACAAGCCCCAAGCAGCCTCTGGAAG...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCACTGTGTACTGGCTGGTaGTTCTTCAGCTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSLCTGW*FFSSRW
Trigger: CCATCTGGAGCTGAAGAACCACCAGCCAGTACACAG...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 72 bp CATTGGTGGCATAATAGACATTCCTTGCTCACATGTTaGGAATCAGGTAGGTGTCAGTTAGATGACTCTGCT +
Preference number: 4 (lower is better)
Translates to: HWWHNRHSLLTC*ESGRCQLDDSA
Trigger: AGCAGAGTCATCTAACTGACACCTACCTGATTCCAAACATGTGAGCAAGGAATGTCTATTATGCCACCAATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 72 bp ATCACTTGGGCACCACATTTATTACTTCTGCCCAGATaGTGTAACCAGGATTCCAATCTCCTCTTGATTAGG +
Preference number: 4 (lower is better)
Translates to: ITWAPHLLLLPR*CNQDSNLLLIR
Trigger: CCTAATCAAGAGGAGATTGGAATCCTGGTTACACAATCTGGGCAGAAGTAATAAATGTGGTGCCCAAGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 72 bp GAGGATGGGTTGCCACACCTACACATTAGTCTCAATTaGGTAGGTTTATCACTTGGGCACCACATTTATTAC +
Preference number: 4 (lower is better)
Translates to: EDGLPHLHISLN*VGLSLGHHIYY
Trigger: GTAATAAATGTGGTGCCCAAGTGATAAACCTACCAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 72 bp CTAAACCTCAATGTGCTAGATTTGGAGGTGAGGACTTaGGGAAGTAATTTGGTTCCAAGAAGCCATGAGGTT +
Preference number: 4 (lower is better)
Translates to: LNLNVLDLEVRT*GSNLVPRSHEV
Trigger: AACCTCATGGCTTCTTGGAACCAAATTACTTCCCAAAGTCCTCACCTCCAAATCTAGCACATTGAGGTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 72 bp GCTATACCTCATCGGCCCTGTAGGCTAGATAATCTTTaGGGAATTATCTATAGCACCCCAATTCTTAGCCAA +
Preference number: 4 (lower is better)
Translates to: AIPHRPCRLDNL*GIIYSTPILSQ
Trigger: TTGGCTAAGAATTGGGGTGCTATAGATAATTCCCAAAAGATTATCTAGCCTACAGGGCCGATGAGGTATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGGTCATGAGTACAGGTaGAAAGATATAAAGATGTTG +
Preference number: 4 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLGHEYR*KDIKML
Trigger: CAACATCTTTATATCTTTTCACCTGTACTCATGACC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATATATGTTTTGCCTTCTaGATCCCTGGGAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNICFAF*IPGRET
Trigger: TGTTTCCCTCCCAGGGATTCAGAAGGCAAAACATAT...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATATCTCTGAATGCAGATaGCCCAGAATCACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNISECR*PRITVG
Trigger: CCCCACTGTGATTCTGGGTCATCTGCATTCAGAGAT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATCTTGCTGCTGTTTCATaGAAAGCCATGAAGAGACAC +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNLAAVS*KAMKRH
Trigger: GTGTCTCTTCATGGCTTTTCATGAAACAGCAGCAAG...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTACTGCTGAATAAAGAGTaGGGTCATAGTAAATCAATC +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLLLNKE*GHSKSI
Trigger: GATTGATTTACTATGACCTCACTCTTTATTCAGCAG...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACCTCCCAGGTTCTAAGTaGTTCTCCTGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYLPGSK*FSCFSL
Trigger: GAGGCTGAAGCAGGAGAATCACTTAGAACCTGGGAG...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATGAGGGTAACCTCAGGTaGAGCTTTTTCTATAGCTGT +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNEGNLR*SFFYSC
Trigger: ACAGCTATAGAAAAAGCTTCACCTGAGGTTACCCTC...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCATCCATGTGCCACATGTaGTGGGATTCTCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSSMCHM*WDSHWQ
Trigger: CTGCCAATGAGAATCCCATCACATGTGGCACATGGA...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATAATGGTGATACTGACTaGGGCTCTGCAAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHNGDTD*GSAKRK
Trigger: TTTCCTCTTTGCAGAGCCTCAGTCAGTATCACCATT...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATGAAGAGGCTATTCCTTaGTTGTGGTTCAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNEEAIP*LWFSSS
Trigger: GGATGAACTGAACCACAATCAAGGAATAGCCTCTTC...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGACCATGCTGAAACTCTaGTCTTGGATTTCCATATTT +
Preference number: 4 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLTMLKL*SWISIF
Trigger: AAATATGGAAATCCAAGATCAGAGTTTCAGCATGGT...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CAATGGAAGCATAATGTAAAATCAGCAGGATCCCTGAGCTGGTTTTCCTGCAACTCCAGGAAAAATGAGTaGAACTTCATGGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: QWKHNVKSAGSLSWFSCNSRKNE*NFMVLF
Trigger: GAAAAGGACCATGAAGTTGCACTCATTTTTCCTGGA...GTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATTATGCTTCCATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000557988.5
CDS-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGGGTCATCTTTCTTATaGCAGCTGAGAGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNGSSFL*QLRDGG
Trigger: GCCTCCATCTCTCAGCTGGCATAAGAAAGATGACCC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAAGGCTAACTCAGCCATaGATATTCTTATGTCAACAG +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVIRLTQP*IFLCQQ
Trigger: CTGTTGACATAAGAATATGCATGGCTGAGTTAGCCT...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATTTCCATGGAGTCTCATaGTCCAGCAGGCTAACTCAG +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNFHGVS*SSRLTQ
Trigger: CTGAGTTAGCCTGCTGGAGCATGAGACTCCATGGAA...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAATAATAGACATTCCTTaGTCACATGTTTGGAATCAG +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPIIDIP*SHVWNQ
Trigger: CTGATTCCAAACATGTGAGCAAGGAATGTCTATTAT...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAGACCTAGTTAGTCACTaGTTCTCTAAATCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVIDLVSH*FSKSLL
Trigger: CAGAAGAGATTTAGAGAAGCAGTGACTAACTAGGTC...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATCTGATATACTGCACTTaGTGGCACATTCTCTTCCGT +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHLIYCT*WHILFR
Trigger: ACGGAAGAGAATGTGCCAGCAAGTGCAGTATATCAG...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAAGAGTTATGAAGAGGTaGAAAGTACCATATGGGTCA +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVIRVMKR*KVPYGS
Trigger: TGACCCATATGGTACTTTGCACCTCTTCATAACTCT...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACCTCTGCTACCACCTCTaGTGCTCCTGGTGGTTTATC +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYLCYHL*CSWWFI
Trigger: GATAAACCACCAGGAGCAGCAGAGGTGGTAGCAGAG...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTAATTACAGTGCTTGCTaGTGCAGTGGGGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLNYSAC*CSGAWE
Trigger: TTCCCAAGCCCCACTGCAGCAGCAAGCACTGTAATT...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACAATTACAGTGCTTGCTaGTGCAGTGGGGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHNYSAC*CSGAWE
Trigger: TTCCCAAGCCCCACTGCAGCAGCAAGCACTGTAATT...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAACAAATTACAGTGCTTaGTGCTGCAGTGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSTNYSA*CCSGAW
Trigger: CCAAGCCCCACTGCAGCAGCAAGCACTGTAATTTGT...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAGGCAGTGTATCTCTTTaGTTATTACAATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVIGSVSL*LLQSTL
Trigger: AAGGGTGGATTGTAATAAGCAAAGAGATACACTGCC...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAAAGAATCTGTTTCTTTaGTTTTTCCAGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLKNLFL*FFQLPE
Trigger: CTCTGGAAGCTGGAAAAAGCAAAGAAACAGATTCTT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATATCCATTGCTCTCCTTaGTTCTTGGCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNIHCSP*FLAPPS
Trigger: AGAGGGAGGAGCCAAGAAGCAAGGAGAGCAATGGAT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATGGTTTCCTAATCCATTaGTCTCCTTGCTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNGFLIH*SPCFLA
Trigger: AGCCAAGAAGCAAGGAGAGCAATGGATTAGGAAACC...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATATCTCCAGAGCATTTaGCATTCTTTATCAACTGGT +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLYLQSI*HSLSTG
Trigger: ACCAGTTGATAAAGAATGCCAAATGCTCTGGAGATA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCACAACTGATGATGACATaGCAGGAAAGGAGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSQLMMT*QERSQG
Trigger: TCCCTGGCTCCTTTCCTGCCATGTCATCATCAGTTG...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATCCTTGCTCACATGTTTaGAATCAGGTAGGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNPCSHV*NQVGVS
Trigger: ACTGACACCTACCTGATTCCAAACATGTGAGCAAGG...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTGCAAGTACACTTGCTTaGCCACAGAGTACGCTTCTG +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLASTLA*PQSTLL
Trigger: CAGAAGCGTACTCTGTGGCCAAGCAAGTGTACTTGC...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAGGGTCAGTAAGTGTTTaGTTAAAGTTTTCACTAGGG +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVIGSVSV*LKFSLG
Trigger: CCCTAGTGAAAACTTTAACCAAACACTTACTGACCC...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAGGACAAATACCAGTTTaGCTACTTGGACTATTAAAT +
Preference number: 4 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPGQIPV*LLGLLN
Trigger: ATTTAATAGTCCAAGTAGCCAAACTGGTATTTGTCC...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCTGAATGCTCTCTGGTaGGCACTGCACGTAATACAG +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNLNALW*ALHVIQ
Trigger: CTGTATTACGTGCAGTGCCCACCAGAGAGCATTCAG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATTCATCCTTTCCACAGTaGACATTCCATTCATGTGCC +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHSSFPQ*TFHSCA
Trigger: GGCACATGAATGGAATGTCCACTGTGGAAAGGATGA...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAACCCCTAGGAATAAATaGGTTCCAAGACCCATTTAT +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVITPRNK*VPRPIY
Trigger: ATAAATGGGTCTTGGAACCCATTTATTCCTAGGGGT...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGGTAGGTTTATCACTTaGGCACCACATTTATTACTT +
Preference number: 4 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLGRFIT*APHLLL
Trigger: AAGTAATAAATGTGGTGCCCAAGTGATAAACCTACC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAAACTGCATTCCTTTCTaGACACTCTGGAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVINCIPF*TLWKES
Trigger: AGATTCTTTCCAGAGTGTCCAGAAAGGAATGCAGTT...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTCAGTTCTTCCCTAGGTaGCCTTTCCATGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLQFFPR*PFHVVS
Trigger: AGACACCACATGGAAAGGCCACCTAGGGAAGAACTG...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACCAGTTCTTCCCTAGGTaGCCTTTCCATGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHQFFPR*PFHVVS
Trigger: AGACACCACATGGAAAGGCCACCTAGGGAAGAACTG...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
3UTR CAA 72 bp AGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTaGCTCCACATAGATCTATGTCTCCCTGTATGCTTA +
Preference number: 4 (lower is better)
Translates to: RQCISLLITIHP*LHIDLCLPVCL
Trigger: TAAGCATACAGGGAGACATAGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACGAGGTCCAGGAAAAATaGGTGCAACTTCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHEVQEK*VQLHGP
Trigger: AGGACCATGAAGTTGCACTCATTTTTCCTGGACCTC...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATACTTGTAACAACCCTTaGAGTCGCTCATCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNTCNNP*SRSSVN
Trigger: ATTCACTGATGAGCGACTTCAAGGGTTGTTACAAGT...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTTCTGCTTTCCTTCGCTaGCTTCATTCTAAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLSAFLR*LHSKSG
Trigger: GCCTGACTTAGAATGAAGTCAGCGAAGGAAAGCAGA...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACTCTGCTTTCCTTCGCTaGCTTCATTCTAAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHSAFLR*LHSKSG
Trigger: GCCTGACTTAGAATGAAGTCAGCGAAGGAAAGCAGA...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATATCAAGTGGGGACATTTaGGAAGAGTGTAATAAAACA +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVISSGDI*EECNKT
Trigger: TGTTTTATTACACTCTTCTCAAATGTCCCCACTTGA...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATTTTCACCCAAACAGGTaGATTTATCAGAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHFHPNR*IYQSPQ
Trigger: TTGGGGACTCTGATAAATTCACCTGTTTGGGTGAAA...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACCTTTCTTATGCCAGCTaGGAGATGGAGGCAAATGAG +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHLSYAS*EMEANE
Trigger: CTCATTTGCCTCCATCTCTCAGCTGGCATAAGAAAG...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCTTATGTATGGGTGGTaGTTTTTGGCTGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNLMYGW*FLAGGL
Trigger: AAGGCCACCAGCCAAAAATCACCACCCATACATAAG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAAGCTGGGGTCAGAAATaGCCTTTCGAAAGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSSWGQK*PFERKP
Trigger: TGGCTTTCTTTCGAAAGGTCATTTCTGACCCCAGCT...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTATTCCAATCTCCTCTTaGTTAGGGTCAACTGATCTT +
Preference number: 4 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSIPISS*LGSTDL
Trigger: AAGATCAGTTGACCCTAATCAAGAGGAGATTGGAAT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTCCAACAATAGCAGGTTaGGTTCTTCTCATTTCACAT +
Preference number: 4 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSPTIAG*VLLISH
Trigger: ATGTGAAATGAGAAGAACTCAACCTGCTATTGTTGG...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTTTACTGTTTCTCAAGTaGAGATGCTTGAGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSLLFLK*RCLRVA
Trigger: AGCTACTCTCAAGCATCTTCACTTGAGAAACAGTAA...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTAGGGAAGGAATTGTTTaGGGGACATCTTCAAAAACT +
Preference number: 4 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSREGIV*GTSSKT
Trigger: AGTTTTTGAAGATGTCCCTCAAACAATTCCTTCCCT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACATGGACTCTACCCTCTaGAGAGAGGAGTCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYMDSTL*REESKE
Trigger: TTCCTTGGACTCCTCTCTTCAGAGGGTAGAGTCCAT...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAACCATGCTGAAACTCTaGTCTTGGATTTCCATATTT +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVITMLKL*SWISIF
Trigger: AAATATGGAAATCCAAGATCAGAGTTTCAGCATGGT...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATATTTCCACATCATAAATaGTCTCAGGGAAAAGATGAG +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVIFPHHK*SQGKDE
Trigger: CTCATCTTTTCCCTGAGATCATTTATGATGTGGAAA...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGCCATGAAGAGACACTaGCAATCATGTGGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNAMKRH*QSCGKY
Trigger: GTACTTGCCACATGATTGGCAGTGTCTCTTCATGGC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATCTCATTTAGGTCTCTaGTCAATTTTACCTTATCAC +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLSHLGL*SILPYH
Trigger: GTGATAAGGTAAAATTGAGCAGAGACCTAAATGAGA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATTATCCAGGTAGCTGCTaGAGCTTATGTTTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNYPGSC*SLCFSV
Trigger: CACTGAAAAACATAAGCTGCAGCAGCTACCTGGATA...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTAAGTATCCAGGTAGCTaGTGCAGCTTATGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSKYPGS*CSLCFS
Trigger: TGAAAAACATAAGCTGCAGCAGCTACCTGGATACTT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTCCTTTTATTGGCTGCTaGTCCCTAGACAGACACAAG +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLPFIGC*SLDRHK
Trigger: CTTGTGTCTGTCTAGGGAGCAGCAGCCAATAAAAGG...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CAATGGAAGCATAATGTAAAATCAGCAGGATCCCTGAGCTGGTTTTCCTGCAACTATCTCCAGAGCATTTaGCATTCTTTATCAACTGGT +
Preference number: 4 (lower is better)
Translates to: QWKHNVKSAGSLSWFSCNYLQSI*HSLSTG
Trigger: ACCAGTTGATAAAGAATGCCAAATGCTCTGGAGATA...GTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATTATGCTTCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557988.5
CDS-3UTR CCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTTCTGCTGATCTTGGCTaGAATCATTCACATATCTTG +
Preference number: 4 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSSADLG*NHSHIL
Trigger: CAAGATATGTGAATGATTCCAGCCAAGATCAGCAGA...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTGGGATTCTGAACATATaGCTAATTGATCTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSGILNI*LIDLKQ
Trigger: CTGCTTGAGATCAATTAGCCATATGTTCAGAATCCC...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATTTTGGCTCTTATGTATaGGTGGTGATTTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNFGSYV*VVIFGW
Trigger: CCAGCCAAAAATCACCACCCATACATAAGAGCCAAA...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATGTGTCTAGTGATGTTTaGCTCTTATGTATGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHVSSDV*LLCMGG
Trigger: ACCACCCATACATAAGAGCCAAACATCACTAGACAC...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAAAGGACCTCTTAGATTaGCCCTTAATCTTAAGTTTT +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLKDLLD*PLILSF
Trigger: AAAACTTAAGATTAAGGGCCAATCTAAGAGGTCCTT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTCCATGCTATTTAAACTaGCACCCCTTTCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLPCYLN*HPFPAP
Trigger: TGGTGCAGGAAAGGGGTGCCAGTTTAAATAGCATGG...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAAGCATTAGTGGCACTTaGCCATTCAATTCTGTTATT +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVISISGT*PFNSVI
Trigger: AATAACAGAATTGAATGGCCAAGTGCCACTAATGCT...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAGTACTGAATGCTCTCTaGTGGGCACTGCACGTAATA +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSVLNAL*WALHVI
Trigger: TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTAC...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAATGACAAGGAAATGCTaGTCCTTCCAGTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSMTRKC*SFQCGR
Trigger: CCTTCCACACTGGAAGGACCAGCATTTCCTTGTCAT...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCACTTGACTCCTTTTATTaGCTGCTGCTCCCTAGACAG +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSLDSFY*LLLPRQ
Trigger: CTGTCTAGGGAGCAGCAGCCAATAAAAGGAGTCAAG...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAAGTCTCACTCCATTATaGCATAAGTTTAAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLSLTPL*HKFKFR
Trigger: TCTGAACTTAAACTTATGCCATAATGGAGTGAGACT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTTTCTTCAGCTCCAGATaGTGTTACCCAGGGTCACTT +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLFFSSR*CYPGSL
Trigger: AAGTGACCCTGGGTAACACCATCTGGAGCTGAAGAA...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATTTTCTGTGTACTGGCTaGTGGTTCTTCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNFLCTG*WFFSSR
Trigger: TCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAA...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CCTGGACAATTATGTTGGGGACAGAACAGTATAAATAATACACCCCTGGAGGACCCTGGACAATTATGTTaGGGACAGAACAGTATAAAT +
Preference number: 4 (lower is better)
Translates to: PGQLCWGQNSINNTPLEDPGQLC*GQNSIN
Trigger: ATTTATACTGTTCTGTCCCCAACATAATTGTCCAGG...GTCCTCCAGGGGTGTATTATTTATACTGTTCTGTCCCCAACATAATTGTCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557968.5
CDS-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGATGCCCTCTTTTCTTaGGCCTCAGATTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNDALFS*ASDSFR
Trigger: CCTAAAAGAATCTGAGGCTCAAGAAAAGAGGGCATC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251250.7
CDS-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATATATGTTTTGCCTTCTaGATCCCTGGGAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNICFAF*IPGRET
Trigger: TGTTTCCCTCCCAGGGATTCAGAAGGCAAAACATAT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATAGAGATGGAGGCAAATaGGTGATAGAATTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHRDGGK*VIELFS
Trigger: AGAGAACAATTCTATCACTCATTTGCCTCCATCTCT...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATAATGCACTAAATCTCTaGATGCAGATGACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNNALNL*MQMTQN
Trigger: ATTCTGGGTCATCTGCATTCAGAGATTTAGTGCATT...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATTTTCATGAAAAGCCATaGAGAGACACTGCCAATCAT +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNFHEKP*RDTANH
Trigger: ATGATTGGCAGTGTCTCTTCATGGCTTTTCATGAAA...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACAAAGGCAGGATCACTTaGGGTCAGGAGTTTCAGATA +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHKGRIT*GQEFQI
Trigger: TATCTGAAACTCCTGACCTCAAGTGATCCTGCCTTT...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATTACAGCACAGGTCAGTaGATTTTCTCCATCAAACAA +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNYSTGQ*IFSIKQ
Trigger: TTGTTTGATGGAGAAAATTCACTGACCTGTGCTGTA...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACGAGGGTAACCTCAGGTaGAGCTTTTTCTATAGCTGT +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHEGNLR*SFFYSC
Trigger: ACAGCTATAGAAAAAGCTTCACCTGAGGTTACCCTC...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTTCTAAAGAGGAATGCTaGGATGGAGTTTGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLSKEEC*DGVWGV
Trigger: TACACCCCAAACTCCATCTCAGCATTCCTCTTTAGA...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATTTGTGTCTATTTCTATaGCAAGGAAATGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNLCLFL*QGNAGP
Trigger: AGGACCAGCATTTCCTTGTCATAGAAATAGACACAA...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATAGTCCTTTCTTAAAGTaGATCAGGCAGTGTATCTCT +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHSPFLK*IRQCIS
Trigger: AGAGATACACTGCCTGATTCACTTTAAGAAAGGACT...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATAGTCCTTTCTTAAAGTaGATCAGGCAGTGTATCTCT +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNSPFLK*IRQCIS
Trigger: AGAGATACACTGCCTGATTCACTTTAAGAAAGGACT...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGAAGAGGCTATTCCTTaGTTGTGGTTCAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNEEAIP*LWFSSS
Trigger: GGATGAACTGAACCACAATCAAGGAATAGCCTCTTC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATGTGCTTTCTATGCACTaGAATTCATATGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNVLSMH*NSYVEA
Trigger: GGCTTCAACATATGAATTTCAGTGCATAGAAAGCAC...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTTGGGGTGGACTAATCTaGTATAAAGGCTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLWGGLI*YKGSQS
Trigger: ACTCTGTGAGCCTTTATATCAGATTAGTCCACCCCA...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTTTGCTCAGTATTGCCTaGTTTGTACAAATGGAAGAA +
Preference number: 4 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSLLSIA*FVQMEE
Trigger: TTCTTCCATTTGTACAAAGCAGGCAATACTGAGCAA...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAGGTAACTGGGGTAACTaGTTGGGAACAGAAGAGATA +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSGNWGN*LGTEEI
Trigger: TATCTCTTCTGTTCCCAAGCAGTTACCCCAGTTACC...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGGGATTACAGACACATaGCATCACACCCGACTAATT +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNGITDT*HHTRLI
Trigger: AATTAGTCGGGTGTGATGGCATGTGTCTGTAATCCC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTATCCTGTCACTCATTTaGTTAAATTCTCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSILSLI*LNSLMA
Trigger: AGCCATCAGAGAATTTAAGCAAATGAGTGACAGGAT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACCTGATATACTGCACTTaGTGGCACATTCTCTTCCGT +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHLIYCT*WHILFR
Trigger: ACGGAAGAGAATGTGCCAGCAAGTGCAGTATATCAG...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATAAATACCTGATATACTaGACTTGCTGGCACATTCTC +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNKYLIY*TCWHIL
Trigger: GAGAATGTGCCAGCAAGTGCAGTATATCAGGTATTT...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAGGTTTCCTAATCCATTaGTCTCCTTGCTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSGFLIH*SPCFLA
Trigger: AGCCAAGAAGCAAGGAGAGCAATGGATTAGGAAACC...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAGTATCAGTTATCAATTaGTATGTAATAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVIVSVIN*YVINHP
Trigger: GGGGTGGTTTATTACATAGCAATTGATAACTGATAC...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTGATGTCAATCTTCAATaGAAGCTTCACAAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSDVNLQ*KLHKWN
Trigger: ATTCCACTTGTGAAGCTTCCATTGAAGATTGACATC...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATTGGAAGAAAATGACATaGCTGATAAGCAGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHWKKMT*LISRKA
Trigger: AGCCTTTCTGCTTATCAGCCATGTCATTTTCTTCCA...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATCCTGCTTTGTACAAATaGAAGAAAATGACATGGCTG +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHPALYK*KKMTWL
Trigger: CAGCCATGTCATTTTCTTCCATTTGTACAAAGCAGG...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCACCTTGCTCACATGTTTaGAATCAGGTAGGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSPCSHV*NQVGVS
Trigger: ACTGACACCTACCTGATTCCAAACATGTGAGCAAGG...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTCACAGAGTACGCTTCTaGACAGGCAAGATGAAAAAC +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLHRVRF*TGKMKN
Trigger: GTTTTTCATCTTGCCTGTCCAGAAGCGTACTCTGTG...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAATGGGTGGTGATTTTTaGCTGGTGGCCTTCAATGTA +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSMGGDF*LVAFNV
Trigger: TACATTGAAGGCCACCAGCCAAAAATCACCACCCAT...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACGTACTGAATGCTCTCTaGTGGGCACTGCACGTAATA +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYVLNAL*WALHVI
Trigger: TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTAC...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATACTTGATATTGAAGAATaGTATTATATCAGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: LFRDSSVLNALWWALHVILDIEE*YYIRGA
Trigger: TGCACCCCTGATATAATACCATTCTTCAATATCAAG...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATACATACTCTGTATCTTaGAGTATGGCATCCTATCCT +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNTYSVS*SMASYP
Trigger: AGGATAGGATGCCATACTCCAAGATACAGAGTATGT...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATACCCCTAGGAATAAATaGGTTCCAAGACCCATTTAT +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNTPRNK*VPRPIY
Trigger: ATAAATGGGTCTTGGAACCCATTTATTCCTAGGGGT...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTCACCTCTGCTGCTCCTaGTGGTTTATCTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLHLCCS*WFIWYN
Trigger: ATTATACCAGATAAACCACCAGGAGCAGCAGAGGTG...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATCCTTTCTGGACACTCTaGAAAGAATCTGTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHPFWTL*KESVSL
Trigger: CAAAGAAACAGATTCTTTCCAGAGTGTCCAGAAAGG...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACTTTCTGTGTACTGGCTaGTGGTTCTTCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYFLCTG*WFFSSR
Trigger: TCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAA...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp AATGATTTTACATCAGTCTACTTCTGGCTGAACACTACATCAGAGTTTCCTCATATGCTGAGGAGACCATaGACTGGCCAAGATGATATA +
Preference number: 4 (lower is better)
Translates to: NDFTSVYFWLNTTSEFPHMLRRP*TGQDDI
Trigger: TATATCATCTTGGCCAGTCCATGGTCTCCTCAGCAT...ATGAGGAAACTCTGATGTAGTGTTCAGCCAGAAGTAGACTGATGTAAAATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557968.5
3UTR CAA 72 bp GGAGCAGTTCCTAAAGGAATCAAGAGACCTCTTTTCTaGACCTCTCAGAAATTTAGAAGATGGGAGATTAGT +
Preference number: 4 (lower is better)
Translates to: GAVPKGIKRPLF*TSQKFRRWEIS
Trigger: ACTAATCTCCCATCTTCTAAATTTCTGAGAGGTCAAGAAAAGAGGTCTCTTGATTCCTTTAGGAACTGCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATACTTGTAACAACCCTTaGAGTCGCTCATCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNTCNNP*SRSSVN
Trigger: ATTCACTGATGAGCGACTTCAAGGGTTGTTACAAGT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATATTCATGGTATTTGGTaGTGTTTCGAGGCTCTTAGG +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNIHGIW*CFEALR
Trigger: CCTAAGAGCCTCGAAACATCACCAAATACCATGAAT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATTCCTCCTATTTTCTTTaGCTTTCTGAGAGATCTCTT +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHSSYFL*LSERSL
Trigger: AAGAGATCTCTCAGAAAGTCAAAGAAAATAGGAGGA...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTTGGATGAATGAATCCTaGAACCCTGAAACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLWMNES*NPETSL
Trigger: AAGGGAAGTTTCAGGGTTTCAGGATTCATTCATCCA...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACTCTAAAGAGGAATGCTaGGATGGAGTTTGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYSKEEC*DGVWGV
Trigger: TACACCCCAAACTCCATCTCAGCATTCCTCTTTAGA...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATAGAGACCTCTTTTCTTaGCCTCTCAGAAATTTAGAA +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHRDLFS*PLRNLE
Trigger: TTCTAAATTTCTGAGAGGTCAAGAAAAGAGGTCTCT...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACCAAGTTCTCTTTGTCTaGGGACTTGGTGCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHQVLFV*GLGAFY
Trigger: ATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTG...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATGTAAAGCCAGTTAAATaGAATAGATTTTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNVKPVK*NRFWLR
Trigger: CCTGAGCCAAAATCTATTGCATTTAACTGGCTTTAC...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACCTAAGGCATGATAATTaGTTGAACTTGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHLRHDN*LNLGGG
Trigger: TCCACCTCCCAAGTTCAAGCAATTATCATGCCTTAG...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATGACTATAGTTGTCAGTaGCTCAAGGGAATACAAAAA +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNDYSCQ*LKGIQK
Trigger: TTTTTGTATTCCCTTGAGGCACTGACAACTATAGTC...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACGGGATTACAGACACATaGCATCACACCCGACTAATT +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYGITDT*HHTRLI
Trigger: AATTAGTCGGGTGTGATGGCATGTGTCTGTAATCCC...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGTTATTCCTCAAACATaGCAAGTATACTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNVIPQT*QVYCCL
Trigger: GAGGCAGCAGTATACTTGGCATGTTTGAGGAATAAC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTATATGGGTCCACTCCTaGGCTTGGTTTTCCATAAAA +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLIWVHS*AWFSIK
Trigger: TTTTATGGAAAACCAAGCGCAGGAGTGGACCCATAT...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACATATGGGTCCACTCCTaGGCTTGGTTTTCCATAAAA +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHIWVHS*AWFSIK
Trigger: TTTTATGGAAAACCAAGCGCAGGAGTGGACCCATAT...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCATATCCAGGTAGCTGCTaGAGCTTATGTTTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSYPGSC*SLCFSV
Trigger: CACTGAAAAACATAAGCTGCAGCAGCTACCTGGATA...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATAGTGAAAGTGAAAACTaGCAGACCTTACTTTTACCA +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHSESEN*QTLLLP
Trigger: TGGTAAAAGTAAGGTCTGGCAGTTTTCACTTTCACT...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATCAGCAAAGAACCAGGTaGAATCAACACTTTCATATA +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHQQRTR*NQHFHI
Trigger: TATATGAAAGTGTTGATTGCACCTGGTTCTTTGCTG...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTCTTCTAATCTCCCACTaGTGCTTCCCATTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLLLISH*CFPFVE
Trigger: TTCAACAAATGGGAAGCACCAGTGGGAGATTAGAAG...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGAAGGCTATTTCAAGTaGGGACATTTGAGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNEGYFK*GHLRRV
Trigger: CACTCTTCTCAAATGTCCCCACTTGAAATAGCCTTC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGTGTCTAGTGATGTTTaGCTCTTATGTATGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNVSSDV*LLCMGG
Trigger: ACCACCCATACATAAGAGCCAAACATCACTAGACAC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATCCTTCTCCGTTTTACTaGAAAACATCTTCAGTATTC +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNPSPFY*KTSSVF
Trigger: GAATACTGAAGATGTTTTCCAGTAAAACGGAGAAGG...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATAGCATTAGTGGCACTTaGCCATTCAATTCTGTTATT +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNSISGT*PFNSVI
Trigger: AATAACAGAATTGAATGGCCAAGTGCCACTAATGCT...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACCACCTCTGCTGCTCCTaGTGGTTTATCTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYHLCCS*WFIWYN
Trigger: ATTATACCAGATAAACCACCAGGAGCAGCAGAGGTG...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACCTTTGTCTGAGGACTTaGTGCTTTCTATGCACTGAA +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHLCLRT*CFLCTE
Trigger: TTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAG...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCTTTGTCTGAGGACTTaGTGCTTTCTATGCACTGAA +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNLCLRT*CFLCTE
Trigger: TTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACCATGCCCTCAATGACTaGAAGTGCAGGATATTAAGA +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYHALND*KCRILR
Trigger: TCTTAATATCCTGCACTTTCAGTCATTGAGGGCATG...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251250.7
CDS-3UTR TCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATTTTCATGAAAAGCCATaGAGAGACACTGCCAATCAT +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNFHEKP*RDTANH
Trigger: ATGATTGGCAGTGTCTCTTCATGGCTTTTCATGAAA...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTTACAGCACAGGTCAGTaGATTTTCTCCATCAAACAA +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLYSTGQ*IFSIKQ
Trigger: TTGTTTGATGGAGAAAATTCACTGACCTGTGCTGTA...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTCCAACAATAGCAGGTTaGGTTCTTCTCATTTCACAT +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLPTIAG*VLLISH
Trigger: ATGTGAAATGAGAAGAACTCAACCTGCTATTGTTGG...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTTTTTATTGGTCAAAGTaGGTTAGAAGGCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLFYWSK*VRRPIQ
Trigger: CTGGATTGGCCTTCTAACTCACTTTGACCAATAAAA...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTGTGCTTTCTATGCACTaGAATTCATATGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLVLSMH*NSYVEA
Trigger: GGCTTCAACATATGAATTTCAGTGCATAGAAAGCAC...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACCAAGTTCTCTTTGTCTaGGGACTTGGTGCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYQVLFV*GLGAFY
Trigger: ATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTG...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTTCCAGGAAAAATGAGTaGAACTTCATGGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLSRKNE*NFMVLF
Trigger: GAAAAGGACCATGAAGTTGCACTCATTTTTCCTGGA...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAACCTTTAATATGTTTTaGCTTCTGAATCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSTFNMF*LLNPWE
Trigger: CTCCCAGGGATTCAGAAGGCAAAACATATTAAAGGT...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATACCTTTAATATGTTTTaGCTTCTGAATCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNTFNMF*LLNPWE
Trigger: CTCCCAGGGATTCAGAAGGCAAAACATATTAAAGGT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAATCCAACTTTGGCCCTaGTTAAATCAATTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSIQLWP*LNQFKP
Trigger: AGGCTTGAATTGATTTAAGCAGGGCCAAAGTTGGAT...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTATCCAACTTTGGCCCTaGTTAAATCAATTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLIQLWP*LNQFKP
Trigger: AGGCTTGAATTGATTTAAGCAGGGCCAAAGTTGGAT...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACCTGTGTAGCACTTGCTaGTGTTTCATGAAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYLCSTC*CFMKSH
Trigger: ATGGCTTTTCATGAAACAGCAGCAAGTGCTACACAG...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTTTACTGTGTAGCACTTaGTGCTGTTTCATGAAAAGC +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLLLCST*CCFMKS
Trigger: GCTTTTCATGAAACAGCAGCAAGTGCTACACAGTAA...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGACCTAGTTAGTCACTaGTTCTCTAAATCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNDLVSH*FSKSLL
Trigger: CAGAAGAGATTTAGAGAAGCAGTGACTAACTAGGTC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATTCTCATTTAGGTCTCTaGTCAATTTTACCTTATCAC +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHSHLGL*SILPYH
Trigger: GTGATAAGGTAAAATTGAGCAGAGACCTAAATGAGA...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTAAATACCTGATATACTaGACTTGCTGGCACATTCTC +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLKYLIY*TCWHIL
Trigger: GAGAATGTGCCAGCAAGTGCAGTATATCAGGTATTT...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGTATTATATCAGGGGTaGAGTATTGTCTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNVLYQG*SIVCVA
Trigger: AGCAACACAGACAATACTGCACCCCTGATATAATAC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTGTATTATATCAGGGGTaGAGTATTGTCTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLVLYQG*SIVCVA
Trigger: AGCAACACAGACAATACTGCACCCCTGATATAATAC...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAAGAGTTATGAAGAGGTaGAAAGTACCATATGGGTCA +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSRVMKR*KVPYGS
Trigger: TGACCCATATGGTACTTTGCACCTCTTCATAACTCT...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTCACATTTATTACTTCTaGCCAGATTGTGTAACCAGG +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLHIYYF*PDCVTR
Trigger: CCTGGTTACACAATCTGGGCAGAAGTAATAAATGTG...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCACACATTTATTACTTCTaGCCAGATTGTGTAACCAGG +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSHIYYF*PDCVTR
Trigger: CCTGGTTACACAATCTGGGCAGAAGTAATAAATGTG...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAGGCAGTGTATCTCTTTaGTTATTACAATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSGSVSL*LLQSTL
Trigger: AAGGGTGGATTGTAATAAGCAAAGAGATACACTGCC...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATGTATCAGTTATCAATTaGTATGTAATAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHVSVIN*YVINHP
Trigger: GGGGTGGTTTATTACATAGCAATTGATAACTGATAC...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTCCTGCTTTGTACAAATaGAAGAAAATGACATGGCTG +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLPALYK*KKMTWL
Trigger: CAGCCATGTCATTTTCTTCCATTTGTACAAAGCAGG...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACCTTCTAATCTCCCACTaGTGCTTCCCATTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYLLISH*CFPFVE
Trigger: TTCAACAAATGGGAAGCACCAGTGGGAGATTAGAAG...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACAACGTCCTATTTCCATaGCATGTTAATAGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHNVLFP*HVNRCY
Trigger: GTAGCACCTATTAACATGCCATGGAAATAGGACGTT...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAGGACTGCCATTAACATaGCCTCAAAGAAAAGAACAA +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSGLPLT*PQRKEQ
Trigger: TTGTTCTTTTCTTTGAGGCCATGTTAATGGCAGTCC...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGGGTCAGTAAGTGTTTaGTTAAAGTTTTCACTAGGG +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNGSVSV*LKFSLG
Trigger: CCCTAGTGAAAACTTTAACCAAACACTTACTGACCC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATCAATCAGCTAATTGCTaGTATAAACATTACAGCACA +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNQSANC*YKHYST
Trigger: TGTGCTGTAATGTTTATACCAGCAATTAGCTGATTG...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCATCCTGGTGGTTTATCTaGTATAATTCAGACCCACAT +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSSWWFI*YNSDPH
Trigger: ATGTGGGTCTGAATTATACCAGATAAACCACCAGGA...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTAACTGCATTCCTTTCTaGACACTCTGGAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLNCIPF*TLWKES
Trigger: AGATTCTTTCCAGAGTGTCCAGAAAGGAATGCAGTT...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATAGTCTCACTCCATTATaGCATAAGTTTAAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: IFFLALTTSACYSHHLDNSLTPL*HKFKFR
Trigger: TCTGAACTTAAACTTATGCCATAATGGAGTGAGACT...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGCCAACAGTAAAACGTaGTCCCAGAGTGATAATAAA +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNANSKT*SQSDNK
Trigger: TTTATTATCACTCTGGGACCACGTTTTACTGTTGGC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACGCCAACAGTAAAACGTaGTCCCAGAGTGATAATAAA +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHANSKT*SQSDNK
Trigger: TTTATTATCACTCTGGGACCACGTTTTACTGTTGGC...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAGGTCATGAGTACAGGTaGAAAGATATAAAGATGTTG +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSGHEYR*KDIKML
Trigger: CAACATCTTTATATCTTTTCACCTGTACTCATGACC...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACAATGCACTAAATCTCTaGATGCAGATGACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYNALNL*MQMTQN
Trigger: ATTCTGGGTCATCTGCATTCAGAGATTTAGTGCATT...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACCTGCTGAATAAAGAGTaGGGTCATAGTAAATCAATC +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHLLNKE*GHSKSI
Trigger: GATTGATTTACTATGACCTCACTCTTTATTCAGCAG...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACCTATCCACAGTGTTCTaGAATTCCTTGATGATAAGC +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYLSTVF*NSLMIS
Trigger: GCTTATCATCAAGGAATTTCAGAACACTGTGGATAG...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTAATGTTCTATCAAGCTaGCAAATTCCAAGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLNVLSS*QIPSGE
Trigger: TTCACCACTTGGAATTTGTCAGCTTGATAGAACATT...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACATTCCAATCTCCTCTTaGTTAGGGTCAACTGATCTT +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYIPISS*LGSTDL
Trigger: AAGATCAGTTGACCCTAATCAAGAGGAGATTGGAAT...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACTTACTGTTTCTCAAGTaGAGATGCTTGAGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYLLFLK*RCLRVA
Trigger: AGCTACTCTCAAGCATCTTCACTTGAGAAACAGTAA...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACAGGGAAGGAATTGTTTaGGGGACATCTTCAAAAACT +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYREGIV*GTSSKT
Trigger: AGTTTTTGAAGATGTCCCTCAAACAATTCCTTCCCT...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR TCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCATTTCCACATCATAAATaGTCTCAGGGAAAAGATGAG +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSFPHHK*SQGKDE
Trigger: CTCATCTTTTCCCTGAGATCATTTATGATGTGGAAA...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACGTAAAGCCAGTTAAATaGAATAGATTTTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHVKPVK*NRFWLR
Trigger: CCTGAGCCAAAATCTATTGCATTTAACTGGCTTTAC...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTGACTATAGTTGTCAGTaGCTCAAGGGAATACAAAAA +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLDYSCQ*LKGIQK
Trigger: TTTTTGTATTCCCTTGAGGCACTGACAACTATAGTC...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATATCCTGTCACTCATTTaGTTAAATTCTCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNILSLI*LNSLMA
Trigger: AGCCATCAGAGAATTTAAGCAAATGAGTGACAGGAT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACGTATGTCCATTCACATaGCTCTATTCTAGACTTTCT +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHVCPFT*LYSRLS
Trigger: AGAAAGTCTAGAATAGAGGCATGTGAATGGACATAC...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACAAGTATCCAGGTAGCTaGTGCAGCTTATGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYKYPGS*CSLCFS
Trigger: TGAAAAACATAAGCTGCAGCAGCTACCTGGATACTT...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTAGTGAAAGTGAAAACTaGCAGACCTTACTTTTACCA +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLSESEN*QTLLLP
Trigger: TGGTAAAAGTAAGGTCTGGCAGTTTTCACTTTCACT...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACCAGCAAAGAACCAGGTaGAATCAACACTTTCATATA +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHQQRTR*NQHFHI
Trigger: TATATGAAAGTGTTGATTGCACCTGGTTCTTTGCTG...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTTATCTCCAGAGCATTTaGCATTCTTTATCAACTGGT +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLYLQSI*HSLSTG
Trigger: ACCAGTTGATAAAGAATGCCAAATGCTCTGGAGATA...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTGCTATAAGACATTGGTaGCATAATAGACATTCCTTG +
Preference number: 4 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLAIRHW*HNRHSL
Trigger: CAAGGAATGTCTATTATGCCACCAATGTCTTATAGC...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACGTGCAAAGTACCATATaGGTCATTAAAAGTGATGGC +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYVQSTI*VIKSDG
Trigger: GCCATCACTTTTAATGACCCATATGGTACTTTGCAC...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACGGTAGGTTTATCACTTaGGCACCACATTTATTACTT +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHGRFIT*APHLLL
Trigger: AAGTAATAAATGTGGTGCCCAAGTGATAAACCTACC...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACTCCTGGTGGTTTATCTaGTATAATTCAGACCCACAT +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYSWWFI*YNSDPH
Trigger: ATGTGGGTCTGAATTATACCAGATAAACCACCAGGA...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACATAATAGACATTCCTTaGTCACATGTTTGGAATCAG +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHIIDIP*SHVWNQ
Trigger: CTGATTCCAAACATGTGAGCAAGGAATGTCTATTAT...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACGTATGTCCATTCACATaGCTCTATTCTAGACTTTCT +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYVCPFT*LYSRLS
Trigger: AGAAAGTCTAGAATAGAGGCATGTGAATGGACATAC...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAACTTGGTGCTTTCTATaGACTGAAATTCATATGTTG +
Preference number: 4 (lower is better)
Translates to: TILQTSYFHGMLIGATYSTWCFL*TEIHML
Trigger: CAACATATGAATTTCAGTGCATAGAAAGCACCAAGT...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR GCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATACTTGGTGCTTTCTATaGACTGAAATTCATATGTTG +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNTWCFL*TEIHML
Trigger: CAACATATGAATTTCAGTGCATAGAAAGCACCAAGT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACTACCTAATGCATTCATaGTATTTGGTGATGTTTCGA +
Preference number: 4 (lower is better)
Translates to: AREINNIISFSSQLLISHYLMHS*YLVMFR
Trigger: TCGAAACATCACCAAATACCATGAATGCATTAGGTA...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCTTGATATTGAAGAATaGTATTATATCAGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNLDIEE*YYIRGA
Trigger: TGCACCCCTGATATAATACCATTCTTCAATATCAAG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACTACCTAATGCATTCATaGTATTTGGTGATGTTTCGA +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYYLMHS*YLVMFR
Trigger: TCGAAACATCACCAAATACCATGAATGCATTAGGTA...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACAAGGACCTCTTAGATTaGCCCTTAATCTTAAGTTTT +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYKDLLD*PLILSF
Trigger: AAAACTTAAGATTAAGGGCCAATCTAAGAGGTCCTT...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CCA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACGGACAAATACCAGTTTaGCTACTTGGACTATTAAAT +
Preference number: 4 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYGQIPV*LLGLLN
Trigger: ATTTAATAGTCCAAGTAGCCAAACTGGTATTTGTCC...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS TCA 90 bp GATCCCCCTCACAGGCGACACCCAGCGCGACCTCCGCTAGGGTCCTaGCAAAGAATGTCCACTTCCCGCGGCCGCACCTCTGGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: DPPHRRHPARPPLGS*QRMSTSRGRTSGAR
Trigger: TCTGGCCCCAGAGGTGCGGCCGCGGGAAGTGGACATTCTTTGTCAGGACCCTAGCGGAGGTCGCGCTGGGTGTCGCCTGTGAGGGGGATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559405.5
CDS CCA 90 bp AAAGAATGTCCACTTCCCGCGGCCGCACCTCTGGGGCCAGACCACTaGTCTCCAGAGAGGCGCGGGGACCTCCACCAGGGATCGGAGTGG +
Preference number: 5 (lower is better)
Translates to: KECPLPAAAPLGPDH*SPERRGDLHQGSEW
Trigger: CCACTCCGATCCCTGGTGGAGGTCCCCGCGCCTCTCTGGAGACCAGTGGTCTGGCCCCAGAGGTGCGGCCGCGGGAAGTGGACATTCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559405.5
CDS CCA 90 bp CACTGGTCTCCAGAGAGGCGCGGGGACCTCCACCAGGGATCGGAGTaGTACTCAGACCTGCACACCCGCGAGTCCTCGAACAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: HWSPERRGDLHQGSE*YSDLHTRESSNSST
Trigger: TGTGGAGCTGTTCGAGGACTCGCGGGTGTGCAGGTCTGAGTACCACTCCGATCCCTGGTGGAGGTCCCCGCGCCTCTCTGGAGACCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558653.5
ENST00000559405.5
CDS-3UTR CAA 90 bp GAAACTACCTTCCCTCTCCCTAGGGTCTCTGAGCACCACATCAGTATTATCCTCGACGCTCGGTCTCAGTaGAAACTACCTTCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: ETTFPLPRVSEHHISIILDARSQ*KLPSLS
Trigger: GGAGAGGGAAGGTAGTTTCAACTGAGACCGAGCGTC...GAGGATAATACTGATGTGGTGCTCAGAGACCCTAGGGAGAGGGAAGGTAGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557968.5
CDS-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGCTTCCAGAGGCTGCTaGGGGCTTGTGGTTCCTATC +
Preference number: 5 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLASRGC*GLVVPI
Trigger: GATAGGAACCACAAGCCCCAAGCAGCCTCTGGAAGC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS TCA 90 bp CTAGGTCCCTTGTATGCACAGTTCACAATAGGGTTCATGCTCCTATaGGAATCTAATGCTGCCGCTGATCTGACAGGAGGCAGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: LGPLYAQFTIGFMLL*ESNAAADLTGGRAQ
Trigger: CTGAGCTCTGCCTCCTGTCAGATCAGCGGCAGCATTAGATTCTCATAGGAGCATGAACCCTATTGTGAACTGTGCATACAAGGGACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560735.5
CDS-3UTR CAA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAGACAAATTACAGTGCTaGCTGCTGCAGTGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPDKLQC*LLQWGL
Trigger: CAAGCCCCACTGCAGCAGCAAGCACTGTAATTTGTC...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGTTGGGGAGAAGCGCTTaGGCTCATCTCTGCAATCCA +
Preference number: 5 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLLGRSA*AHLCNP
Trigger: TGGATTGCAGAGATGAGCCAAAGCGCTTCTCCCCAA...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGACAAATTACAGTGCTaGCTGCTGCAGTGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLDKLQC*LLQWGL
Trigger: CAAGCCCCACTGCAGCAGCAAGCACTGTAATTTGTC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATATGCTCTCCTTGCTTCTaGGCTCCTCCCTCTGGGATT +
Preference number: 5 (lower is better)
Translates to: LFRDSSVLNALWWALHVICSPCF*APPSGI
Trigger: AATCCCAGAGGGAGGAGCCAAGAAGCAAGGAGAGCA...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGTCACATATCTTGGGTTaGGCTGGCCATCAGCCAATC +
Preference number: 5 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLSHILG*AGHQPI
Trigger: GATTGGCTGATGGCCAGCCAAACCCAAGATATGTGA...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGTGATGGGATTCTCATaGGCAGCTCAGATCACTCCT +
Preference number: 5 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLVMGFS*AAQITP
Trigger: AGGAGTGATCTGAGCTGCCAATGAGAATCCCATCAC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS GCA 90 bp TGGAAGCATAATGTAAAATCAGCAGGATCCCTGAGCTGGTTTTCCTaGAACTTGATGGTCCCATCTAGGACATGGGAGACAGTGACAGAT +
Preference number: 5 (lower is better)
Translates to: WKHNVKSAGSLSWFS*NLMVPSRTWETVTD
Trigger: ATCTGTCACTGTCTCCCATGTCCTAGATGGGACCATCAAGTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATTATGCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557988.5
CDS-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGGTGCTTCCCATTTGTaGAACCCAACCAAAAGCAAG +
Preference number: 5 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLGASHL*NPTKSK
Trigger: CTTGCTTTTGGTTGGGTTCAACAAATGGGAAGCACC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAACTGGTGCTTCCCATTaGTTGAACCCAACCAAAAGC +
Preference number: 5 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLTGASH*LNPTKS
Trigger: GCTTTTGGTTGGGTTCAACAAATGGGAAGCACCAGT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGAGGCATGATAATTGCTaGAACTTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLRHDNC*NLGGGG
Trigger: ACCTCCACCTCCCAAGTTCAAGCAATTATCATGCCT...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAGGTCCACTCCTGCGCTaGGTTTTCCATAAAATAGGT +
Preference number: 5 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLGPLLR*VFHKIG
Trigger: ACCTATTTTATGGAAAACCAAGCGCAGGAGTGGACC...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTCAAAACTGTGTCCCCTaGTGGGACCAAGACCTCTCA +
Preference number: 5 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSQNCVP*WDQDLS
Trigger: TGAGAGGTCTTGGTCCCACAAGGGGACACAGTTTTG...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGCTCAATGTGCTAGATTaGGAGGTGAGGACTTTGGGA +
Preference number: 5 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLLNVLD*EVRTLG
Trigger: TCCCAAAGTCCTCACCTCCAAATCTAGCACATTGAG...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCAAGGTTCAAGTTCTCTTaGTCTGAGGACTTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPRFKFS*SEDLVL
Trigger: AAGCACCAAGTCCTCAGACAAAGAGAACTTGAACCT...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp AATGTAAAATCAGCAGGATCCCTGAGCTGGTTTTCCTGCAACTTGATGGTCCCATGGTTTTCCTGCAACTaGATGGTCCCATCTAGGACA +
Preference number: 5 (lower is better)
Translates to: NVKSAGSLSWFSCNLMVPWFSCN*MVPSRT
Trigger: TGTCCTAGATGGGACCATCAAGTTGCAGGAAAACCA...TGGGACCATCAAGTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557988.5
CDS-3UTR CAA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAAATCATTCACATATCTaGGGTTTGGCTGGCCATCAG +
Preference number: 5 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLNHSHI*GLAGHQ
Trigger: CTGATGGCCAGCCAAACCCAAGATATGTGAATGATT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATTTGGGGAGAAGCGCTTaGGCTCATCTCTGCAATCCA +
Preference number: 5 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHLGRSA*AHLCNP
Trigger: TGGATTGCAGAGATGAGCCAAAGCGCTTCTCCCCAA...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGATAATTGCTTGAACTaGGGAGGTGGAGGTTGTAGT +
Preference number: 5 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLDNCLN*GGGGCS
Trigger: ACTACAACCTCCACCTCCCAAGTTCAAGCAATTATC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCATGTACCTTCAGCAGGTaGTTCCAATGTTCTATCAAG +
Preference number: 5 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPCTFSR*FQCSIK
Trigger: CTTGATAGAACATTGGAACAACCTGCTGAAGGTACA...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTAGTGTCCTTCTGCAGTaGAAGCAGACTCTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSSVLLQ*KQTLKE
Trigger: CTCCTTCAGAGTCTGCTTCAACTGCAGAAGGACACT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGAGGCTGCTTGGGGCTaGTGGTTCCTATCACTCACC +
Preference number: 5 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNEAAWG*WFLSLT
Trigger: GGTGAGTGATAGGAACCACAAGCCCCAAGCAGCCTC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGCTTCCAGAGGCTGCTaGGGGCTTGTGGTTCCTATC +
Preference number: 5 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNASRGC*GLVVPI
Trigger: GATAGGAACCACAAGCCCCAAGCAGCCTCTGGAAGC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAGGAAGAGGCTATTCCTaGATTGTGGTTCAGTTCATC +
Preference number: 5 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLGRGYS*IVVQFI
Trigger: GATGAACTGAACCACAATCAAGGAATAGCCTCTTCC...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTACTAAGGCAGTGCTATaGACTGGGGCATCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSTKAVL*TGASQF
Trigger: GAACTGAGATGCCCCAGTCAATAGCACTGCCTTAGT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TCTCAGTTGAAACTACCTTCCCTCTCCCTAGGGTCTCTGAGCACCACATCAGTATCCTGGACAATTATGTaGGGGACAGAACAGTATAAA +
Preference number: 5 (lower is better)
Translates to: SQLKLPSLSLGSLSTTSVSWTIM*GTEQYK
Trigger: TTTATACTGTTCTGTCCCCAACATAATTGTCCAGGA...TACTGATGTGGTGCTCAGAGACCCTAGGGAGAGGGAAGGTAGTTTCAACTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557968.5
CDS-3UTR CAA 90 bp AATGTAAAATCAGCAGGATCCCTGAGCTGGTTTTCCTGCAACTTGATGGTCCCAACAGATCTTCAGGCATaGGATTCTCCTTCACAAGTG +
Preference number: 5 (lower is better)
Translates to: NVKSAGSLSWFSCNLMVPTDLQA*DSPSQV
Trigger: CACTTGTGAAGGAGAATCCAATGCCTGAAGATCTGT...TGGGACCATCAAGTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557988.5
CDS CCA 90 bp AATCTTCAATGGAAGCATAATGTAAAATCAGCAGGATCCCTGAGCTaGTTTTCCTGCAACTTGATGGTCCCATCTAGGACATGGGAGACA +
Preference number: 5 (lower is better)
Translates to: NLQWKHNVKSAGSLS*FSCNLMVPSRTWET
Trigger: TGTCTCCCATGTCCTAGATGGGACCATCAAGTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATTATGCTTCCATTGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557988.5
CDS-3UTR CAA 90 bp CAATGGAAGCATAATGTAAAATCAGCAGGATCCCTGAGCTGGTTTTCCTGCAACATCTGGCTTTCCTTTTaGATGGCGCCAAAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: QWKHNVKSAGSLSWFSCNIWLSF*MAPKAS
Trigger: ACTTGCTTTTGGCGCCATCAAAAAGGAAAGCCAGAT...GTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATTATGCTTCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000557988.5
CDS-3UTR CAA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTACTGGTGCTTCCCATTaGTTGAACCCAACCAAAAGC +
Preference number: 5 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSTGASH*LNPTKS
Trigger: GCTTTTGGTTGGGTTCAACAAATGGGAAGCACCAGT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATTCACATATCTTGGGTTaGGCTGGCCATCAGCCAATC +
Preference number: 5 (lower is better)
Translates to: IFFLALTTSACYSHHLDNSHILG*AGHQPI
Trigger: GATTGGCTGATGGCCAGCCAAACCCAAGATATGTGA...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAAATCATTCACATATCTaGGGTTTGGCTGGCCATCAG +
Preference number: 5 (lower is better)
Translates to: LFRDSSVLNALWWALHVINHSHI*GLAGHQ
Trigger: CTGATGGCCAGCCAAACCCAAGATATGTGAATGATT...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATCCTGATATACTGCACTaGCTGGCACATTCTCTTCCG +
Preference number: 5 (lower is better)
Translates to: IFFLALTTSACYSHHLDNPDILH*LAHSLP
Trigger: CGGAAGAGAATGTGCCAGCAAGTGCAGTATATCAGG...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATCCTGATATACTGCACTaGCTGGCACATTCTCTTCCG +
Preference number: 5 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHPDILH*LAHSLP
Trigger: CGGAAGAGAATGTGCCAGCAAGTGCAGTATATCAGG...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATGTACCTTCAGCAGGTaGTTCCAATGTTCTATCAAG +
Preference number: 5 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLCTFSR*FQCSIK
Trigger: CTTGATAGAACATTGGAACAACCTGCTGAAGGTACA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGAGGCAGTGTATCTCTTaGCTTATTACAATCCACCCT +
Preference number: 5 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLRQCIS*LITIHP
Trigger: AGGGTGGATTGTAATAAGCAAAGAGATACACTGCCT...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTATCCTCCAGTAAGAGTTaGTTCACTATTCTTCAAGGC +
Preference number: 5 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLSSSKS*FTILQG
Trigger: GCCTTGAAGAATAGTGAACAAACTCTTACTGGAGGA...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACTGCTCTCCTTGCTTCTaGGCTCCTCCCTCTGGGATT +
Preference number: 5 (lower is better)
Translates to: AREINNIISFSSQLLISHCSPCF*APPSGI
Trigger: AATCCCAGAGGGAGGAGCCAAGAAGCAAGGAGAGCA...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGAAGGAAGGGAAGGAATaGTTTGAGGGACATCTTCAA +
Preference number: 5 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLKEGKE*FEGHLQ
Trigger: TTGAAGATGTCCCTCAAACAATTCCTTCCCTTCCTT...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TTCTCATTTCTGTGTACTGGCTGGTGGTTCTTCAGCTCCAGATGGTGTTACCCATCAGTATTGCCTGCTTaGTACAAATGGAAGAAAATG +
Preference number: 5 (lower is better)
Translates to: FSFLCTGWWFFSSRWCYPSVLPA*YKWKKM
Trigger: CATTTTCTTCCATTTGTACAAAGCAGGCAATACTGA...TGGGTAACACCATCTGGAGCTGAAGAACCACCAGCCAGTACACAGAAATGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATGGTGCTTCCCATTTGTaGAACCCAACCAAAAGCAAG +
Preference number: 5 (lower is better)
Translates to: IFFLALTTSACYSHHLDNGASHL*NPTKSK
Trigger: CTTGCTTTTGGTTGGGTTCAACAAATGGGAAGCACC...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAATGACTCTGCTGATCTaGGCTGGAATCATTCACATA +
Preference number: 5 (lower is better)
Translates to: LFRDSSVLNALWWALHVIMTLLI*AGIIHI
Trigger: TATGTGAATGATTCCAGCCAAGATCAGCAGAGTCAT...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTGATAATTGCTTGAACTaGGGAGGTGGAGGTTGTAGT +
Preference number: 5 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSDNCLN*GGGGCS
Trigger: ACTACAACCTCCACCTCCCAAGTTCAAGCAATTATC...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAGATCCTGTCACTCATTaGCTTAAATTCTCTGATGGC +
Preference number: 5 (lower is better)
Translates to: LFRDSSVLNALWWALHVIDPVTH*LKFSDG
Trigger: GCCATCAGAGAATTTAAGCAAATGAGTGACAGGATC...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACCAAAACTGTGTCCCCTaGTGGGACCAAGACCTCTCA +
Preference number: 5 (lower is better)
Translates to: AREINNIISFSSQLLISHQNCVP*WDQDLS
Trigger: TGAGAGGTCTTGGTCCCACAAGGGGACACAGTTTTG...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAGCCAACAATAGCAGGTaGAGTTCTTCTCATTTCACA +
Preference number: 5 (lower is better)
Translates to: LFRDSSVLNALWWALHVIANNSR*SSSHFT
Trigger: TGTGAAATGAGAAGAACTCAACCTGCTATTGTTGGC...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTAATCCATTGCTCTCCTaGCTTCTTGGCTCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLNPLLS*LLGSSL
Trigger: GAGGGAGGAGCCAAGAAGCAAGGAGAGCAATGGATT...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATTGGTTTCCTAATCCATaGCTCTCCTTGCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHWFPNP*LSLLLG
Trigger: GCCAAGAAGCAAGGAGAGCAATGGATTAGGAAACCA...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS TCA 90 bp CTGCCTAAAAATGGCTTTGATCTTTGTGATCATGCCCTCAATGACTaGAAGTGCAGGATATTAAGATGCCCTCTTTTCTTGAGCCTCAGA +
Preference number: 5 (lower is better)
Translates to: LPKNGFDLCDHALND*KCRILRCPLFLSLR
Trigger: TCTGAGGCTCAAGAAAAGAGGGCATCTTAATATCCTGCACTTTCAGTCATTGAGGGCATGATCACAAAGATCAAAGCCATTTTTAGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000561188.5
CDS CCA 90 bp AATCTTCAATGGAAGCATAATGTAAAATCAGCAGGATCCCTGAGCTaGTTTTCCTGCAACTTGATGGTCCCATCTTCACAAGTGGAATCT +
Preference number: 5 (lower is better)
Translates to: NLQWKHNVKSAGSLS*FSCNLMVPSSQVES
Trigger: AGATTCCACTTGTGAAGATGGGACCATCAAGTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATTATGCTTCCATTGAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559223.5
CDS-3UTR CAA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATATCTGGCTTTCCTTTTaGATGGCGCCAAAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHIWLSF*MAPKAS
Trigger: ACTTGCTTTTGGCGCCATCAAAAAGGAAAGCCAGAT...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGTCAGTATTGCCTGCTTaGTACAAATGGAAGAAAATG +
Preference number: 5 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLSVLPA*YKWKKM
Trigger: CATTTTCTTCCATTTGTACAAAGCAGGCAATACTGA...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGGCTTTTTCTAGTCCATaGATCCAAGTTTTTCAGACA +
Preference number: 5 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLAFSSP*IQVFQT
Trigger: TGTCTGAAAAACTTGGATCAATGGACTAGAAAAAGC...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TTGCCTATGAGCTGGTGTTCAGCTGTACCTTCAGCAGGTTGTTCCAATGTTCTAAGTTCATGTACATACTaGACACAAGTATGTCCATTC +
Preference number: 5 (lower is better)
Translates to: LPMSWCSAVPSAGCSNVLSSCTY*TQVCPF
Trigger: GAATGGACATACTTGTGTCAAGTATGTACATGAACT...TAGAACATTGGAACAACCTGCTGAAGGTACAGCTGAACACCAGCTCATAGGCAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTTTACTTCTGCCCAGATaGTGTAACCAGGATTCCAAT +
Preference number: 5 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSLLLPR*CNQDSN
Trigger: ATTGGAATCCTGGTTACACAATCTGGGCAGAAGTAA...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGAAGAGACCTCTTTTCTaGACCTCTCAGAAATTTAGA +
Preference number: 5 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLKRPLF*TSQKFR
Trigger: TCTAAATTTCTGAGAGGTCAAGAAAAGAGGTCTCTT...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAAGTGTCCTTCTGCAGTaGAAGCAGACTCTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: TILQTSYFHGMLIGATYSSVLLQ*KQTLKE
Trigger: CTCCTTCAGAGTCTGCTTCAACTGCAGAAGGACACT...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CCATCATGCCCTTTTGAGGATGGGTTGCCACACCTACACATTAGTCTCAATTTGAAACTCTTTGATTTTTaGCTTCCCATGGGCATTAAG +
Preference number: 5 (lower is better)
Translates to: PSCPFEDGLPHLHISLNLKLFDF*LPMGIK
Trigger: CTTAATGCCCATGGGAAGCAAAAAATCAAAGAGTTT...CAAATTGAGACTAATGTGTAGGTGTGGCAACCCATCCTCAAAAGGGCATGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACCCTCCCTCTGGGATTTaGGCTCCATCTTCCATCTAT +
Preference number: 5 (lower is better)
Translates to: AREINNIISFSSQLLISHPPSGI*APSSIY
Trigger: ATAGATGGAAGATGGAGCCAAAATCCCAGAGGGAGG...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTCCTCCCTCTGGGATTTaGGCTCCATCTTCCATCTAT +
Preference number: 5 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLPPSGI*APSSIY
Trigger: ATAGATGGAAGATGGAGCCAAAATCCCAGAGGGAGG...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACAATCCATTGCTCTCCTaGCTTCTTGGCTCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYNPLLS*LLGSSL
Trigger: GAGGGAGGAGCCAAGAAGCAAGGAGAGCAATGGATT...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATGGAAGAGGCTATTCCTaGATTGTGGTTCAGTTCATC +
Preference number: 5 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHGRGYS*IVVQFI
Trigger: GATGAACTGAACCACAATCAAGGAATAGCCTCTTCC...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAACTAAGGCAGTGCTATaGACTGGGGCATCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: TILQTSYFHGMLIGATYSTKAVL*TGASQF
Trigger: GAACTGAGATGCCCCAGTCAATAGCACTGCCTTAGT...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATAGGTTCAAGTTCTCTTaGTCTGAGGACTTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: IFFLALTTSACYSHHLDNRFKFS*SEDLVL
Trigger: AAGCACCAAGTCCTCAGACAAAGAGAACTTGAACCT...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACAGGCATGATAATTGCTaGAACTTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: AREINNIISFSSQLLISHRHDNC*NLGGGG
Trigger: ACCTCCACCTCCCAAGTTCAAGCAATTATCATGCCT...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTATGCTGAGATGGAGTTaGGGGTGTAAGATGTTTATT +
Preference number: 5 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSMLRWS*GCKMFI
Trigger: AATAAACATCTTACACCCCAAACTCCATCTCAGCAT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACGTGATGGGATTCTCATaGGCAGCTCAGATCACTCCT +
Preference number: 5 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYVMGFS*AAQITP
Trigger: AGGAGTGATCTGAGCTGCCAATGAGAATCCCATCAC...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATTTACTTCTGCCCAGATaGTGTAACCAGGATTCCAAT +
Preference number: 5 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHLLLPR*CNQDSN
Trigger: ATTGGAATCCTGGTTACACAATCTGGGCAGAAGTAA...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAAAGAGACCTCTTTTCTaGACCTCTCAGAAATTTAGA +
Preference number: 5 (lower is better)
Translates to: LFRDSSVLNALWWALHVIKRPLF*TSQKFR
Trigger: TCTAAATTTCTGAGAGGTCAAGAAAAGAGGTCTCTT...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACTGGTTTCCTAATCCATaGCTCTCCTTGCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: AREINNIISFSSQLLISHWFPNP*LSLLLG
Trigger: GCCAAGAAGCAAGGAGAGCAATGGATTAGGAAACCA...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TTGTTTAGAGACTCTTCAGTACTGAATGCTCTCTGGTGGGCACTGCACGTAATAGCTGAAACTCTGATCTaGGATTTCCATATTTTCAGT +
Preference number: 5 (lower is better)
Translates to: LFRDSSVLNALWWALHVIAETLI*DFHIFS
Trigger: ACTGAAAATATGGAAATCCAAGATCAGAGTTTCAGC...TATTACGTGCAGTGCCCACCAGAGAGCATTCAGTACTGAAGAGTCTCTAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCTCAATGTGCTAGATTaGGAGGTGAGGACTTTGGGA +
Preference number: 5 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNLNVLD*EVRTLG
Trigger: TCCCAAAGTCCTCACCTCCAAATCTAGCACATTGAG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATATCTGGCTTTCCTTTTaGATGGCGCCAAAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNIWLSF*MAPKAS
Trigger: ACTTGCTTTTGGCGCCATCAAAAAGGAAAGCCAGAT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CAGGCAGTGTATCTCTTTGCTTATTACAATCCACCCTTTGCTCCACATAGATCTAGCCAGTTAGTTTATTaGGCTAAGACTGTAAGACTA +
Preference number: 5 (lower is better)
Translates to: QAVYLFAYYNPPFAPHRSSQLVY*AKTVRL
Trigger: TAGTCTTACAGTCTTAGCCAAATAAACTAACTGGCT...AGATCTATGTGGAGCAAAGGGTGGATTGTAATAAGCAAAGAGATACACTGCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GGTTCAAGTTCTCTTTGTCTGAGGACTTGGTGCTTTCTATGCACTGAAATTCATCATAATAGACATTCCTaGCTCACATGTTTGGAATCA +
Preference number: 5 (lower is better)
Translates to: GSSSLCLRTWCFLCTEIHHNRHS*LTCLES
Trigger: TGATTCCAAACATGTGAGCAAGGAATGTCTATTATG...ATGAATTTCAGTGCATAGAAAGCACCAAGTCCTCAGACAAAGAGAACTTGAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCATGGGAGGTAATACCTTaGAGACCTTCTGTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: TILQTSYFHGMLIGATYSWEVIP*RPSVSL
Trigger: TAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCA...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACTGGGAGGTAATACCTTaGAGACCTTCTGTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: AREINNIISFSSQLLISHWEVIP*RPSVSL
Trigger: TAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCA...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACGATCCTGTCACTCATTaGCTTAAATTCTCTGATGGC +
Preference number: 5 (lower is better)
Translates to: AREINNIISFSSQLLISHDPVTH*LKFSDG
Trigger: GCCATCAGAGAATTTAAGCAAATGAGTGACAGGATC...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp ATTTTCTTCTTAGCACTTACTACCTCGGCATGCTATAGCCATCACCTAGACAATCTAGACTTTCTGTGCTaGATCTTCCAGTATTTATTC +
Preference number: 5 (lower is better)
Translates to: IFFLALTTSACYSHHLDNLDFLC*IFQYLF
Trigger: GAATAAATACTGGAAGATCAAGCACAGAAAGTCTAG...ATTGTCTAGGTGATGGCTATAGCATGCCGAGGTAGTAAGTGCTAAGAAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCATACATACTCTGTATCTaGGAGTATGGCATCCTATCC +
Preference number: 5 (lower is better)
Translates to: TILQTSYFHGMLIGATYSYILCI*EYGILS
Trigger: GGATAGGATGCCATACTCCAAGATACAGAGTATGTA...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCTTCTTCTACTCTCTTaGCATCTACCCCTAGGAATA +
Preference number: 5 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNLLLLS*HLPLGI
Trigger: TATTCCTAGGGGTAGATGCAAAGAGAGTAGAAGAAG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATGCCAACAATAGCAGGTaGAGTTCTTCTCATTTCACA +
Preference number: 5 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNANNSR*SSSHFT
Trigger: TGTGAAATGAGAAGAACTCAACCTGCTATTGTTGGC...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTTCCTCCAGTAAGAGTTaGTTCACTATTCTTCAAGGC +
Preference number: 5 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLSSSKS*FTILQG
Trigger: GCCTTGAAGAATAGTGAACAAACTCTTACTGGAGGA...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACAAGGAAGGGAAGGAATaGTTTGAGGGACATCTTCAA +
Preference number: 5 (lower is better)
Translates to: AREINNIISFSSQLLISHKEGKE*FEGHLQ
Trigger: TTGAAGATGTCCCTCAAACAATTCCTTCCCTTCCTT...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCATTATCTCCAGAGCATTaGGCATTCTTTATCAACTGG +
Preference number: 5 (lower is better)
Translates to: TILQTSYFHGMLIGATYSLSPEH*AFFINW
Trigger: CCAGTTGATAAAGAATGCCAAATGCTCTGGAGATAA...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTTTATCTCCAGAGCATTaGGCATTCTTTATCAACTGG +
Preference number: 5 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLLSPEH*AFFINW
Trigger: CCAGTTGATAAAGAATGCCAAATGCTCTGGAGATAA...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp ACAATACTCCAAACGTCCTATTTCCATGGCATGTTAATAGGTGCTACATATTCAAGGGTCAGTAAGTGTTaGGTTAAAGTTTTCACTAGG +
Preference number: 5 (lower is better)
Translates to: TILQTSYFHGMLIGATYSRVSKC*VKVFTR
Trigger: CCTAGTGAAAACTTTAACCAAACACTTACTGACCCT...TGAATATGTAGCACCTATTAACATGCCATGGAAATAGGACGTTTGGAGTATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATAGGGTCAGTAAGTGTTaGGTTAAAGTTTTCACTAGG +
Preference number: 5 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNRVSKC*VKVFTR
Trigger: CCTAGTGAAAACTTTAACCAAACACTTACTGACCCT...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCTGTTACAAGCTCTATaGCCTTTCCTCTTAAGGTTT +
Preference number: 5 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNLLQAL*PFLLRF
Trigger: AAACCTTAAGAGGAAAGGCAATAGAGCTTGTAACAG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTATGCTGAGATGGAGTTaGGGGTGTAAGATGTTTATT +
Preference number: 5 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLMLRWS*GCKMFI
Trigger: AATAAACATCTTACACCCCAAACTCCATCTCAGCAT...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACAGGCAGTGTATCTCTTaGCTTATTACAATCCACCCT +
Preference number: 5 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYRQCIS*LITIHP
Trigger: AGGGTGGATTGTAATAAGCAAAGAGATACACTGCCT...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTAGCCAGTTAGTTTATTaGGCTAAGACTGTAAGACTA +
Preference number: 5 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLSQLVY*AKTVRL
Trigger: TAGTCTTACAGTCTTAGCCAAATAAACTAACTGGCT...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACCATAATAGACATTCCTaGCTCACATGTTTGGAATCA +
Preference number: 5 (lower is better)
Translates to: AREINNIISFSSQLLISHHNRHS*LTCLES
Trigger: TGATTCCAAACATGTGAGCAAGGAATGTCTATTATG...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp CTCTTGAAGTATTCTCTACTGTTTTCTATTCCCAACTTCAGCCAGCAAAGTAATCTAGACTTTCTGTGCTaGATCTTCCAGTATTTATTC +
Preference number: 5 (lower is better)
Translates to: LLKYSLLFSIPNFSQQSNLDFLC*IFQYLF
Trigger: GAATAAATACTGGAAGATCAAGCACAGAAAGTCTAG...ATTACTTTGCTGGCTGAAGTTGGGAATAGAAAACAGTAGAGAATACTTCAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GCCAGGGAAATAAATAACATCATTTCATTTTCCTCTCAACTTCTAATCTCCCACAGTTCATGTACATACTaGACACAAGTATGTCCATTC +
Preference number: 5 (lower is better)
Translates to: AREINNIISFSSQLLISHSSCTY*TQVCPF
Trigger: GAATGGACATACTTGTGTCAAGTATGTACATGAACT...GTGGGAGATTAGAAGTTGAGAGGAAAATGAAATGATGTTATTTATTTCCCTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTAAACTCTTTGATTTTTaGCTTCCCATGGGCATTAAG +
Preference number: 5 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLKLFDF*LPMGIK
Trigger: CTTAATGCCCATGGGAAGCAAAAAATCAAAGAGTTT...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp GATGTTTCGAGGCTCTTAGGTACCTTATCTATTGTACTTAATAACAGTCAGCTTAGGCTAGATAATCTTTaGGGAATTATCTATAGCACC +
Preference number: 5 (lower is better)
Translates to: DVSRLLGTLSIVLNNSQLRLDNL*GIIYST
Trigger: GGTGCTATAGATAATTCCCAAAAGATTATCTAGCCT...AAGCTGACTGTTATTAAGTACAATAGATAAGGTACCTAAGAGCCTCGAAACATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACGCTTTTTCTAGTCCATaGATCCAAGTTTTTCAGACA +
Preference number: 5 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYAFSSP*IQVFQT
Trigger: TGTCTGAAAAACTTGGATCAATGGACTAGAAAAAGC...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS-3UTR CAA 90 bp TATCTCAAGAATATATGGGAGGTAATACCTTTGAGACCTTCTGTGTCTTTATACAGGCTAGATAATCTTTaGGGAATTATCTATAGCACC +
Preference number: 5 (lower is better)
Translates to: YLKNIWEVIPLRPSVSLYRLDNL*GIIYST
Trigger: GGTGCTATAGATAATTCCCAAAAGATTATCTAGCCT...GTATAAAGACACAGAAGGTCTCAAAGGTATTACCTCCCATATATTCTTGAGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251250.7
ENST00000403028.8
CDS CCA 72 bp CCAGAGAGGCGCGGGGACCTCCACCAGGGATCGGAGTaGTACTCAGACCTGCACACCCGCGAGTCCTCGAAC +
Preference number: 6 (lower is better)
Translates to: PERRGDLHQGSE*YSDLHTRESSN
Trigger: GTTCGAGGACTCGCGGGTGTGCAGGTCTGAGTACCACTCCGATCCCTGGTGGAGGTCCCCGCGCCTCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558653.5
ENST00000559405.5
CDS TCA 72 bp CACAGGCGACACCCAGCGCGACCTCCGCTAGGGTCCTaGCAAAGAATGTCCACTTCCCGCGGCCGCACCTCT +
Preference number: 6 (lower is better)
Translates to: HRRHPARPPLGS*QRMSTSRGRTS
Trigger: AGAGGTGCGGCCGCGGGAAGTGGACATTCTTTGTCAGGACCCTAGCGGAGGTCGCGCTGGGTGTCGCCTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559405.5
CDS CAA 72 bp AAATCAGCAGGATCCCTGAGCTGGTTTTCCTGCAACTaGATGGTCCCATCTAGGACATGGGAGACAGTGACA +
Preference number: 6 (lower is better)
Translates to: KSAGSLSWFSCN*MVPSRTWETVT
Trigger: TGTCACTGTCTCCCATGTCCTAGATGGGACCATCAAGTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557988.5
ENST00000560735.5
CDS GCA 72 bp AATGTAAAATCAGCAGGATCCCTGAGCTGGTTTTCCTaGAACTTGATGGTCCCATCTAGGACATGGGAGACA +
Preference number: 6 (lower is better)
Translates to: NVKSAGSLSWFS*NLMVPSRTWET
Trigger: TGTCTCCCATGTCCTAGATGGGACCATCAAGTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557988.5
ENST00000560735.5
CDS CCA 72 bp TGGTTTTCCTGCAACTTGATGGTCCCATCTAGGACATaGGAGACAGTGACAGATCTTCAGGCATTGGATTCT +
Preference number: 6 (lower is better)
Translates to: WFSCNLMVPSRT*ETVTDLQALDS
Trigger: AGAATCCAATGCCTGAAGATCTGTCACTGTCTCCCATGTCCTAGATGGGACCATCAAGTTGCAGGAAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557988.5
ENST00000560735.5
CDS CCA 72 bp TGGAAGCATAATGTAAAATCAGCAGGATCCCTGAGCTaGTTTTCCTGCAACTTGATGGTCCCATCTAGGACA +
Preference number: 6 (lower is better)
Translates to: WKHNVKSAGSLS*FSCNLMVPSRT
Trigger: TGTCCTAGATGGGACCATCAAGTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATTATGCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557988.5
CDS CAA 72 bp AAATCAGCAGGATCCCTGAGCTGGTTTTCCTGCAACTaGATGGTCCCATCTTCACAAGTGGAATCTGTTCAA +
Preference number: 6 (lower is better)
Translates to: KSAGSLSWFSCN*MVPSSQVESVQ
Trigger: TTGAACAGATTCCACTTGTGAAGATGGGACCATCAAGTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559223.5
CDS GCA 72 bp AATGTAAAATCAGCAGGATCCCTGAGCTGGTTTTCCTaGAACTTGATGGTCCCATCTTCACAAGTGGAATCT +
Preference number: 6 (lower is better)
Translates to: NVKSAGSLSWFS*NLMVPSSQVES
Trigger: AGATTCCACTTGTGAAGATGGGACCATCAAGTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559223.5
CDS CCA 72 bp TGGAAGCATAATGTAAAATCAGCAGGATCCCTGAGCTaGTTTTCCTGCAACTTGATGGTCCCATCTTCACAA +
Preference number: 6 (lower is better)
Translates to: WKHNVKSAGSLS*FSCNLMVPSSQ
Trigger: TTGTGAAGATGGGACCATCAAGTTGCAGGAAAACCAGCTCAGGGATCCTGCTGATTTTACATTATGCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559223.5