RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DTNBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000047579

Ensembl transcript IDs: ENST00000338950.9, ENST00000344537.10, ENST00000355917.7, ENST00000462989.6, ENST00000506844.1, ENST00000509674.1, ENST00000510395.5, ENST00000511762.2, ENST00000513680.5, ENST00000514651.1, ENST00000515875.5, ENST00000622898.4

Found 715 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTCCTCCTCATCGGACTGAACAACGGGGGACTCCCCACCCTCACTaGTGTCCCGGGTGGCCGAGTCGGTGCAGGTGGAGGAAGAAGAAG +
Preference number: 1 (lower is better)
Translates to: LPPHRTEQRGTPHPH*CPGWPSRCRWRKKK
Trigger: CTTCTTCTTCCTCCACCTGCACCGACTCGGCCACCCGGGACATCAGTGAGGGTGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR GCA 90 bp CTGAACACACACCATGGCTTTGCCCATGGCAGGCACGCCCCTAAATaGCTGTCGCACGAAGAGGGAAGAGTTTCCCGTGAGCCCCGCAGG +
Preference number: 1 (lower is better)
Translates to: LNTHHGFAHGRHAPK*LSHEEGRVSREPRR
Trigger: CCTGCGGGGCTCACGGGAAACTCTTCCCTCTTCGTGCGACAGGCATTTAGGGGCGTGCCTGCCATGGGCAAAGCCATGGTGTGTGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR CCA 90 bp TTCATGACGGAACCACACCACTGTTGCAGCTGCCACACAGCCGTGTaGAACCGTGGGGTTAGGGAGCCAGGAGCTGGCTGTGAGCTTGGG +
Preference number: 1 (lower is better)
Translates to: FMTEPHHCCSCHTAV*NRGVREPGAGCELG
Trigger: CCCAAGCTCACAGCCAGCTCCTGGCTCCCTAACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTCATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR TCA 90 bp GTCGCTGTCCTCACCACCATCCGGAGTGGCCTCTCTGTCAGTGTGTaGTGTGGCCAGGGCAGTGTCCACCTGAACTTCCTCCTCATCGGA +
Preference number: 1 (lower is better)
Translates to: VAVLTTIRSGLSVSV*CGQGSVHLNFLLIG
Trigger: TCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCTGGCCACATCACACACTGACAGAGAGGCCACTCCGGATGGTGGTGAGGACAGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR GCA 90 bp CGTGGGGTTAGGGAGCCAGGAGCTGGCTGTGAGCTTGGGGGTTTATaGGTAAGTGACTGGCAGATGGTTCTCACGTCTCACCTTTGGAGG +
Preference number: 1 (lower is better)
Translates to: RGVREPGAGCELGGL*VSDWQMVLTSHLWR
Trigger: CCTCCAAAGGTGAGACGTGAGAACCATCTGCCAGTCACTTACGCATAAACCCCCAAGCTCACAGCCAGCTCCTGGCTCCCTAACCCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR CCA 90 bp CCCATGTCCCAATTTAAGAGTCGCTGTCCTCACCACCATCCGGAGTaGCCTCTCTGTCAGTGTGTGATGTGGCCAGGGCAGTGTCCACCT +
Preference number: 1 (lower is better)
Translates to: PMSQFKSRCPHHHPE*PLCQCVMWPGQCPP
Trigger: AGGTGGACACTGCCCTGGCCACATCACACACTGACAGAGAGGCCACTCCGGATGGTGGTGAGGACAGCGACTCTTAAATTGGGACATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR CCA 90 bp GAGCCAGGAGCTGGCTGTGAGCTTGGGGGTTTATGCGTAAGTGACTaGCAGATGGTTCTCACGTCTCACCTTTGGAGGGGAGTGGCATCG +
Preference number: 1 (lower is better)
Translates to: EPGAGCELGGLCVSD*QMVLTSHLWRGVAS
Trigger: CGATGCCACTCCCCTCCAAAGGTGAGACGTGAGAACCATCTGCCAGTCACTTACGCATAAACCCCCAAGCTCACAGCCAGCTCCTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR CCA 90 bp GTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTaGTCCGATATGTCCATCAGGTCCATCTGCTCCAGCATGTCCACG +
Preference number: 1 (lower is better)
Translates to: VFSSPPEFRKTSRAS*SDMSIRSICSSMST
Trigger: CGTGGACATGCTGGAGCAGATGGACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR GCA 90 bp AGCTGCTCTTGCAGCTCCACGAGGCTTGTCTTTTTCTTCTCCCAGTaGGCAGAAAGCATGACCACCTCGCTATCCACCAGCTCTCCAGCA +
Preference number: 1 (lower is better)
Translates to: SCSCSSTRLVFFFSQ*AESMTTSLSTSSPA
Trigger: TGCTGGAGAGCTGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGCAAGAGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR TCA 90 bp CTGGGACGACTGAGCTTTGCCTTGACCCAGCCCAAAGAACTGGTCTaGAATTTGAAACGCACCAAGCCCAGGTACAGGTCTGGCACCTCA +
Preference number: 1 (lower is better)
Translates to: LGRLSFALTQPKELV*NLKRTKPRYRSGTS
Trigger: TGAGGTGCCAGACCTGTACCTGGGCTTGGTGCGTTTCAAATTTCAGACCAGTTCTTTGGGCTGGGTCAAGGCAAAGCTCAGTCGTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR TCA 90 bp GAGGAAGCTGAAACCGTGGTAATGGTAGAACCTTCTACAGATGGCTaGGGTGCTGCTGGGACGACTGAGCTTTGCCTTGACCCAGCCCAA +
Preference number: 1 (lower is better)
Translates to: EEAETVVMVEPSTDG*GAAGTTELCLDPAQ
Trigger: TTGGGCTGGGTCAAGGCAAAGCTCAGTCGTCCCAGCAGCACCTCAGCCATCTGTAGAAGGTTCTACCATTACCACGGTTTCAGCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR TCA 90 bp GCTCCACGAGGCTTGTCTTTTTCTTCTCCCAGTGCGCAGAAAGCATaGCCACCTCGCTATCCACCAGCTCTCCAGCACTTGCACAGTCTT +
Preference number: 1 (lower is better)
Translates to: APRGLSFSSPSAQKA*PPRYPPALQHLHSL
Trigger: AAGACTGTGCAAGTGCTGGAGAGCTGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR GCA 90 bp GATTCTAAGTCTGCGATTAAAGCTGGGAGCTGCTGGAGCTGCTCTTaGAGCTCCACGAGGCTTGTCTTTTTCTTCTCCCAGTGCGCAGAA +
Preference number: 1 (lower is better)
Translates to: DSKSAIKAGSCWSCS*SSTRLVFFFSQCAE
Trigger: TTCTGCGCACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAATCGCAGACTTAGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR GCA 90 bp AGATGGTTCTCACGTCTCACCTTTGGAGGGGAGTGGCATCGATACTaGCCTGGTTCAGCTAATGCAAGTTTGTCAACCCTACCTAAGGCG +
Preference number: 1 (lower is better)
Translates to: RWFSRLTFGGEWHRY*PGSANASLSTLPKA
Trigger: CGCCTTAGGTAGGGTTGACAAACTTGCATTAGCTGAACCAGGGCAGTATCGATGCCACTCCCCTCCAAAGGTGAGACGTGAGAACCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR CCA 90 bp TCACTGTTTCTAAATCTTCCCCTGACTCTGGGTGAGGGTTCACGCTaGTCTCCAGTATTCTGGCCTTCTCAGGATGAGGGCAAATGCACC +
Preference number: 1 (lower is better)
Translates to: SLFLNLPLTLGEGSR*SPVFWPSQDEGKCT
Trigger: GGTGCATTTGCCCTCATCCTGAGAAGGCCAGAATACTGGAGACCAGCGTGAACCCTCACCCAGAGTCAGGGGAAGATTTAGAAACAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR TCA 90 bp CAAAGTTACCGGAGTGGAGCATGTCAAATCTTTGAGAAGAATTCATaGCGGAACCACACCACTGTTGCAGCTGCCACACAGCCGTGTGGA +
Preference number: 1 (lower is better)
Translates to: QSYRSGACQIFEKNS*RNHTTVAAATQPCG
Trigger: TCCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTCATGAATTCTTCTCAAAGATTTGACATGCTCCACTCCGGTAACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR TCA 90 bp TCTGACAGATTGCCAGGAGAAGCGGGTGAGAAGTTTAGAGGAAGCTaGAACCGTGGTAATGGTAGAACCTTCTACAGATGGCTGAGGTGC +
Preference number: 1 (lower is better)
Translates to: SDRLPGEAGEKFRGS*NRGNGRTFYRWLRC
Trigger: GCACCTCAGCCATCTGTAGAAGGTTCTACCATTACCACGGTTTCAGCTTCCTCTAAACTTCTCACCCGCTTCTCCTGGCAATCTGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR CCA 90 bp TTTGCTGTCATGGATTCTAAGTCTGCGATTAAAGCTGGGAGCTGCTaGAGCTGCTCTTGCAGCTCCACGAGGCTTGTCTTTTTCTTCTCC +
Preference number: 1 (lower is better)
Translates to: FAVMDSKSAIKAGSC*SCSCSSTRLVFFFS
Trigger: GGAGAAGAAAAAGACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAATCGCAGACTTAGAATCCATGACAGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR CCA 90 bp TCCTTCAGCTTCATTTGCTGGGTGTGCTCCATTTCCAGGACCTTCTaGGCGTGCTCTGCATCTAGTTCAGCTTTGAAGGTTTCAAGTTCC +
Preference number: 1 (lower is better)
Translates to: SFSFICWVCSISRTF*ACSASSSALKVSSS
Trigger: GGAACTTGAAACCTTCAAAGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAATGGAGCACACCCAGCAAATGAAGCTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR GCA 90 bp AGATTTGCTGTCATGGATTCTAAGTCTGCGATTAAAGCTGGGAGCTaGTGGAGCTGCTCTTGCAGCTCCACGAGGCTTGTCTTTTTCTTC +
Preference number: 1 (lower is better)
Translates to: RFAVMDSKSAIKAGS*WSCSCSSTRLVFFF
Trigger: GAAGAAAAAGACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAATCGCAGACTTAGAATCCATGACAGCAAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR GCA 90 bp TCCAGTTGCTGGGACTGCATATGTTTGCATCTTTCTAATTCACACTaGCCACATAAGTCTTCCAGATGCAGCAGGTTGTTCTCTACCTCC +
Preference number: 1 (lower is better)
Translates to: SSCWDCICLHLSNSH*PHKSSRCSRLFSTS
Trigger: GGAGGTAGAGAACAACCTGCTGCATCTGGAAGACTTATGTGGGCAGTGTGAATTAGAAAGATGCAAACATATGCAGTCCCAGCAACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR CCA 90 bp CAAACGCCAGTCCTTAACCACAAGGAGCAGACTCAAATGGATTTCTaGGTGGTAAAGGAGGGAAAACAAACAAGAAAGCTCTCAACTCAC +
Preference number: 1 (lower is better)
Translates to: QTPVLNHKEQTQMDF*VVKEGKQTRKLSTH
Trigger: GTGAGTTGAGAGCTTTCTTGTTTGTTTTCCCTCCTTTACCACCCAGAAATCCATTTGAGTCTGCTCCTTGTGGTTAAGGACTGGCGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR CCA 90 bp AGAACTGGTCTGAAATTTGAAACGCACCAAGCCCAGGTACAGGTCTaGCACCTCAGCCCATATTTGCTGCATGAATGTGAAACAAAATTT +
Preference number: 1 (lower is better)
Translates to: RTGLKFETHQAQVQV*HLSPYLLHECETKF
Trigger: AAATTTTGTTTCACATTCATGCAGCAAATATGGGCTGAGGTGCCAGACCTGTACCTGGGCTTGGTGCGTTTCAAATTTCAGACCAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR GCA 90 bp TCTTATTTTTCTTGTAATTCTCCAGTTGCTGGGACTGCATATGTTTaGATCTTTCTAATTCACACTGCCCACATAAGTCTTCCAGATGCA +
Preference number: 1 (lower is better)
Translates to: SYFSCNSPVAGTAYV*IFLIHTAHISLPDA
Trigger: TGCATCTGGAAGACTTATGTGGGCAGTGTGAATTAGAAAGATGCAAACATATGCAGTCCCAGCAACTGGAGAATTACAAGAAAAATAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR TCA 90 bp TTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATACTCCCCACCCTCACTaGTGTCCCGGGTGGCCGAGT +
Preference number: 2 (lower is better)
Translates to: FSSRVQEDVQGLLVRYVHTPHPH*CPGWPS
Trigger: ACTCGGCCACCCGGGACATCAGTGAGGGTGGGGAGT...ATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR TCA 90 bp CGCCCATGTCCCAATTTAAGAGTCGCTGTCCTCACCACCATCCGGAGTGGCCTCTCCTCCTCATCGGACTaGACAACGGGGGACTCCCCA +
Preference number: 2 (lower is better)
Translates to: RPCPNLRVAVLTTIRSGLSSSSD*TTGDSP
Trigger: TGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGA...GAGGCCACTCCGGATGGTGGTGAGGACAGCGACTCTTAAATTGGGACATGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR GCA 90 bp TCTGCAGGTAGCCAGTGGACAGGTACTGCTCCATGTCCTGCTGGAAGGCTTCCTGGGAGCTGCTGGAGCTaGTCTTGCAGCTCCACGAGG +
Preference number: 2 (lower is better)
Translates to: SAGSQWTGTAPCPAGRLPGSCWS*SCSSTR
Trigger: CCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGCTCCC...AGGAAGCCTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CCA 90 bp CTGAACAACGGGGGACTCCCCACCCTCACTGATGTCCCGGGTGGCCGAGTCGGTGCATACAGCCAAAACTaGATTCCAGTGTGGCCAGAC +
Preference number: 2 (lower is better)
Translates to: LNNGGLPTLTDVPGGRVGAYSQN*IPVWPD
Trigger: GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGC...ACCGACTCGGCCACCCGGGACATCAGTGAGGGTGGGGAGTCCCCCGTTGTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR GCA 90 bp AATCTGCAGGTAGCCAGTGGACAGGTACTGCTCCATGTCCTGCTGGAAGGCTTCGGGAGCTGCTGGAGCTaGTCTTGCAGCTCCACGAGG +
Preference number: 2 (lower is better)
Translates to: NLQVASGQVLLHVLLEGFGSCWS*SCSSTR
Trigger: CCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGCTCCC...GAAGCCTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CCA 90 bp CGCCCATGTCCCAATTTAAGAGTCGCTGTCCTCACCACCATCCGGAGTGGCCTCACGTCCAGGGCCTCCTaGTCCGATATGTCCATCAGG +
Preference number: 2 (lower is better)
Translates to: RPCPNLRVAVLTTIRSGLTSRAS*SDMSIR
Trigger: CCTGATGGACATATCGGACCAGGAGGCCCTGGACGT...GAGGCCACTCCGGATGGTGGTGAGGACAGCGACTCTTAAATTGGGACATGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR CCA 90 bp GCCGCTCTGCAATCTGCAGGTAGCCAGTGGACAGGTACTGCTCCATGTCCTGCTCACCACCATCCGGAGTaGCCTCTCTGTCAGTGTGTG +
Preference number: 2 (lower is better)
Translates to: AALQSAGSQWTGTAPCPAHHHPE*PLCQCV
Trigger: CACACACTGACAGAGAGGCCACTCCGGATGGTGGTG...AGCAGGACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGATTGCAGAGCGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CCA 90 bp TTCCTCCTCATCGGACTGAACAACGGGGGACTCCCCACCCTCACTGATGTCCCGATGACATGCTGCCTATaGGCTCTCGCCGCTCTGCAA +
Preference number: 2 (lower is better)
Translates to: FLLIGLNNGGLPTLTDVPMTCCL*ALAALQ
Trigger: TTGCAGAGCGGCGAGAGCCCATAGGCAGCATGTCAT...CGGGACATCAGTGAGGGTGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510395.5
3UTR-3UTR TCA 90 bp ACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCGCTGTACTCCCCACCCTCACTaGTGTCCCGGGTGGCCGAGT +
Preference number: 2 (lower is better)
Translates to: TGFQCGQTTPMSQFKSRCTPHPH*CPGWPS
Trigger: ACTCGGCCACCCGGGACATCAGTGAGGGTGGGGAGT...ACAGCGACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR GCA 90 bp TGTGTGATGTGGCCAGGGCAGTGTCCACCTGAACTTCCTCCTCATCGGACTGAAGGGTGGCCGAGTCGGTaGAGGTGGAGGAAGAAGAAG +
Preference number: 2 (lower is better)
Translates to: CVMWPGQCPPELPPHRTEGWPSR*RWRKKK
Trigger: CTTCTTCTTCCTCCACCTGCACCGACTCGGCCACCC...TTCAGTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCTGGCCACATCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR GCA 90 bp CACCTGAACTTCCTCCTCATCGGACTGAACAACGGGGGACTCCCCACCCTCACTCCAGTGGACAGGTACTaGTCCATGTCCTGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: HLNFLLIGLNNGGLPTLTPVDRY*SMSCWK
Trigger: CTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGG...AGTGAGGGTGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGAAGTTCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CCA 90 bp TTCTCACGTCTCACCTTTGGAGGGGAGTGGCATCGATACTGCCCTGGTTCAGCTTGCCACACAGCCGTGTaGAACCGTGGGGTTAGGGAG +
Preference number: 2 (lower is better)
Translates to: FSRLTFGGEWHRYCPGSACHTAV*NRGVRE
Trigger: CTCCCTAACCCCACGGTTCCACACGGCTGTGTGGCA...AGCTGAACCAGGGCAGTATCGATGCCACTCCCCTCCAAAGGTGAGACGTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR-3UTR CCA 90 bp CACCTGAACTTCCTCCTCATCGGACTGAACAACGGGGGACTCCCCACCCTCACTTGTCAGTGTGTGATGTaGCCAGGGCAGTGTCCACCT +
Preference number: 2 (lower is better)
Translates to: HLNFLLIGLNNGGLPTLTCQCVM*PGQCPP
Trigger: AGGTGGACACTGCCCTGGCCACATCACACACTGACA...AGTGAGGGTGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGAAGTTCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR CCA 90 bp GAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCAGGTCCATCCACCACCATCCGGAGTaGCCTCTCTGTCAGTGTGTG +
Preference number: 2 (lower is better)
Translates to: EFRKTSRASWSDMSIRSIHHHPE*PLCQCV
Trigger: CACACACTGACAGAGAGGCCACTCCGGATGGTGGTG...GATGGACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR GCA 90 bp TTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATGAACCACACCACTGTTaGAGCTGCCACACAGCCGTG +
Preference number: 2 (lower is better)
Translates to: FSSRVQEDVQGLLVRYVHEPHHC*SCHTAV
Trigger: CACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTC...ATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR-3UTR GCA 90 bp TTCCTCCTCATCGGACTGAACAACGGGGGACTCCCCACCCTCACTGATGTCCCGCAGCTCTCCAGCACTTaGACAGTCTTTGGCTCTTCT +
Preference number: 2 (lower is better)
Translates to: FLLIGLNNGGLPTLTDVPQLSST*TVFGSS
Trigger: AGAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTG...CGGGACATCAGTGAGGGTGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR GCA 90 bp ACAGTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCTCCATCAGGTCCATCTaGTCCAGCATGTCCACGTTC +
Preference number: 2 (lower is better)
Translates to: TVFSSPPEFRKTSRASWSSIRSI*SSMSTF
Trigger: GAACGTGGACATGCTGGAGCAGATGGACCTGATGGA...GGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR GCA 90 bp AGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCTGCTGGAGCTGCTCTTaGAGCTCCACGAGGCTTGTC +
Preference number: 2 (lower is better)
Translates to: RWNSAYSQNWIPVWPDNACWSCS*SSTRLV
Trigger: GACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCA...GGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR GCA 90 bp GAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCAGGTCCATCATTAAAGCTGGGAGCTaGTGGAGCTGCTCTTGCAGC +
Preference number: 2 (lower is better)
Translates to: EFRKTSRASWSDMSIRSIIKAGS*WSCSCS
Trigger: GCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAAT...GATGGACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR GCA 90 bp GTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATAGGACCTTCTGGGCGTaGTCTGCATCTAGTTCAGCT +
Preference number: 2 (lower is better)
Translates to: VFSSPPEFRKTSRASWSDRTFWA*SASSSA
Trigger: AGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCT...ATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CCA 90 bp TCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCAACTGGATTCCAGTGTaGCCAGACAACGCCCATGTC +
Preference number: 2 (lower is better)
Translates to: SSPPEFRKTSRASWSDMSNWIPV*PDNAHV
Trigger: GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTT...GGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR CCA 90 bp CACCTGAACTTCCTCCTCATCGGACTGAACAACGGGGGACTCCCCACCCTCACTACCTGGCTTTCCAGGTaGAATTCCGCATACAGCCAA +
Preference number: 2 (lower is better)
Translates to: HLNFLLIGLNNGGLPTLTTWLSR*NSAYSQ
Trigger: TTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT...AGTGAGGGTGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGAAGTTCAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR CCA 90 bp CCCATGTCCCAATTTAAGAGTCGCTGTCCTCACCACCATCCGGAGTGGCCTCTCCATTCTGACAGGTACTaGATTCAGGCCCTAAGGCGG +
Preference number: 2 (lower is better)
Translates to: PMSQFKSRCPHHHPEWPLHSDRY*IQALRR
Trigger: CCGCCTTAGGGCCTGAATCCAGTACCTGTCAGAATG...GAGAGGCCACTCCGGATGGTGGTGAGGACAGCGACTCTTAAATTGGGACATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR CAA 90 bp GGAGGGGAGTGGCATCGATACTGCCCTGGTTCAGCTAATGCAAGTTaGTCAACCCTACCTAAGGCGGGGGACAGCACAGTGTTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: GGEWHRYCPGSANAS*STLPKAGDSTVFSS
Trigger: AGAAGAGAACACTGTGCTGTCCCCCGCCTTAGGTAGGGTTGACAAACTTGCATTAGCTGAACCAGGGCAGTATCGATGCCACTCCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR-3UTR TCA 90 bp GAAGAATTCATGACGGAACCACACCACTGTTGCAGCTGCCACACAGCCGTGTGGACACAGGCCAAGAGCTaGACACACACCATGGCTTTG +
Preference number: 2 (lower is better)
Translates to: EEFMTEPHHCCSCHTAVWTQAKS*THTMAL
Trigger: CAAAGCCATGGTGTGTGTTCAGCTCTTGGCCTGTGT...CCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTCATGAATTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR-3UTR GCA 90 bp TGTGTGATGTGGCCAGGGCAGTGTCCACCTGAACTTCCTCCTCATCGGACTGAATCCATCAGGTCCATCTaGTCCAGCATGTCCACGTTC +
Preference number: 2 (lower is better)
Translates to: CVMWPGQCPPELPPHRTESIRSI*SSMSTF
Trigger: GAACGTGGACATGCTGGAGCAGATGGACCTGATGGA...TTCAGTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCTGGCCACATCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR GCA 90 bp TTCCTCCTCATCGGACTGAACAACGGGGGACTCCCCACCCTCACTGATGTCCCGCATAAGTCTTCCAGATaGAGCAGGTTGTTCTCTACC +
Preference number: 2 (lower is better)
Translates to: FLLIGLNNGGLPTLTDVPHKSSR*SRLFST
Trigger: GGTAGAGAACAACCTGCTGCATCTGGAAGACTTATG...CGGGACATCAGTGAGGGTGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR GCA 90 bp CCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCGGGCTCTCGCCGCTCTaGAATCTGCAGGTAGCCAGT +
Preference number: 2 (lower is better)
Translates to: PKLDSSVARQRPCPNLRVGLSPL*NLQVAS
Trigger: ACTGGCTACCTGCAGATTGCAGAGCGGCGAGAGCCC...GACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510395.5
3UTR-3UTR CCA 90 bp GTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATGCATACAGCCAAAACTaGATTCCAGTGTGGCCAGAC +
Preference number: 2 (lower is better)
Translates to: VFSSPPEFRKTSRASWSDAYSQN*IPVWPD
Trigger: GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGC...ATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR CCA 90 bp ACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCGCTGTAAAGCTGGGAGCTGCTaGAGCTGCTCTTGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: TGFQCGQTTPMSQFKSRCKAGSC*SCSCSS
Trigger: GGAGCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTT...ACAGCGACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR TCA 90 bp CTGAACTTCCTCCTCATCGGACTGAACAACGGGGGACTCCCCACCCTCACTGATAGGGTAATCTCATTCTaGCAGGTACTGGATTCAGGC +
Preference number: 2 (lower is better)
Translates to: LNFLLIGLNNGGLPTLTDRVISF*QVLDSG
Trigger: GCCTGAATCCAGTACCTGTCAGAATGAGATTACCCT...ATCAGTGAGGGTGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGAAGTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR TCA 90 bp AACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACACTCCCCACCCTCACTaGTGTCCCGGGTGGCCGAGT +
Preference number: 2 (lower is better)
Translates to: NLYKTTWLSRWNSAYSQNTPHPH*CPGWPS
Trigger: ACTCGGCCACCCGGGACATCAGTGAGGGTGGGGAGT...GTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR TCA 90 bp AATCTGCAGGTAGCCAGTGGACAGGTACTGCTCCATGTCCTGCTGGAAGGCTTCTCTTTGGCTCTTCTGTaGAGTGCAGCCCATGTATCC +
Preference number: 2 (lower is better)
Translates to: NLQVASGQVLLHVLLEGFSLALL*SAAHVS
Trigger: GGATACATGGGCTGCACTTCACAGAAGAGCCAAAGA...GAAGCCTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR GCA 90 bp TCCAGGACCTTCTGGGCGTGCTCTGCATCTAGTTCAGCTTTGAAGGTTTCAAGTGAGTCCGCACCTCCCTaGAAACGCCAGTCCTTAACC +
Preference number: 2 (lower is better)
Translates to: SRTFWACSASSSALKVSSESAPP*KRQSLT
Trigger: GGTTAAGGACTGGCGTTTGCAGGGAGGTGCGGACTC...ACTTGAAACCTTCAAAGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR-3UTR GCA 90 bp GATGACACCGTTCTGACAGATTGCCAGGAGAAGCGGGTGAGAAGTTTAGAGGAAAGGCACGCCCCTAAATaGCTGTCGCACGAAGAGGGA +
Preference number: 2 (lower is better)
Translates to: DDTVLTDCQEKRVRSLEERHAPK*LSHEEG
Trigger: TCCCTCTTCGTGCGACAGGCATTTAGGGGCGTGCCT...TTCCTCTAAACTTCTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGTGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR-3UTR GCA 90 bp TCCAGGACCTTCTGGGCGTGCTCTGCATCTAGTTCAGCTTTGAAGGTTTCAAGTAGGCACGCCCCTAAATaGCTGTCGCACGAAGAGGGA +
Preference number: 2 (lower is better)
Translates to: SRTFWACSASSSALKVSSRHAPK*LSHEEG
Trigger: TCCCTCTTCGTGCGACAGGCATTTAGGGGCGTGCCT...ACTTGAAACCTTCAAAGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR-3UTR GCA 90 bp CAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCAGGTCCAGGCTCTTCTGTGAAGTaGAGCCCATGTATCCTCATA +
Preference number: 2 (lower is better)
Translates to: QSSGRRPGPPGPICPSGPGSSVK*SPCILI
Trigger: TATGAGGATACATGGGCTGCACTTCACAGAAGAGCC...TGGACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR GCA 90 bp CCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCTGCTGGAGCTGCTCTTaGAGCTCCACGAGGCTTGTC +
Preference number: 2 (lower is better)
Translates to: PKLDSSVARQRPCPNLRVCWSCS*SSTRLV
Trigger: GACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCA...GACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR GCA 90 bp TTCCTCCTCATCGGACTGAACAACGGGGGACTCCCCACCCTCACTGATGTCCCGTCCAGTTGCTGGGACTaGATATGTTTGCATCTTTCT +
Preference number: 2 (lower is better)
Translates to: FLLIGLNNGGLPTLTDVPSSCWD*ICLHLS
Trigger: AGAAAGATGCAAACATATGCAGTCCCAGCAACTGGA...CGGGACATCAGTGAGGGTGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CCA 90 bp AGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCAACTGGATTCCAGTGTaGCCAGACAACGCCCATGTC +
Preference number: 2 (lower is better)
Translates to: RWNSAYSQNWIPVWPDNANWIPV*PDNAHV
Trigger: GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTT...GGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
3UTR-3UTR CCA 90 bp ACAACGCCCATGTCCCAATTTAAGAGTCGCTGTCCTCACCACCATCCGGAGTGGACCTGGCTTTCCAGGTaGAATTCCGCATACAGCCAA +
Preference number: 2 (lower is better)
Translates to: TTPMSQFKSRCPHHHPEWTWLSR*NSAYSQ
Trigger: TTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT...CCACTCCGGATGGTGGTGAGGACAGCGACTCTTAAATTGGGACATGGGCGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR CCA 90 bp CAGGATGACACCGTTCTGACAGATTGCCAGGAGAAGCGGGTGAGAAGTTTAGAGGCTGAACACACACCATaGCTTTGCCCATGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: QDDTVLTDCQEKRVRSLEAEHTP*LCPWQA
Trigger: TGCCTGCCATGGGCAAAGCCATGGTGTGTGTTCAGC...CTCTAAACTTCTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGTGTCATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR-3UTR CCA 90 bp AGGACCTTCTGGGCGTGCTCTGCATCTAGTTCAGCTTTGAAGGTTTCAAGTTCCAAAGCTGGGAGCTGCTaGAGCTGCTCTTGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: RTFWACSASSSALKVSSSKAGSC*SCSCSS
Trigger: GGAGCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTT...GGAACTTGAAACCTTCAAAGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CCA 90 bp TTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATATTTCCAGGACCTTCTaGGCGTGCTCTGCATCTAGT +
Preference number: 2 (lower is better)
Translates to: FSSRVQEDVQGLLVRYVHISRTF*ACSASS
Trigger: ACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAAT...ATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR TCA 90 bp AAGAGGGAAGAGTTTCCCGTGAGCCCCGCAGGAGAGTCCGCACCTCCCTGCAAAAGGGATGAAAGGAACTaGAGTGCAACTAAGTTTACA +
Preference number: 2 (lower is better)
Translates to: KREEFPVSPAGESAPPCKRDERN*SATKFT
Trigger: TGTAAACTTAGTTGCACTTCAGTTCCTTTCATCCCT...TTTGCAGGGAGGTGCGGACTCTCCTGCGGGGCTCACGGGAAACTCTTCCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR-3UTR GCA 90 bp TGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATAGGCTCTTCTGTGAAGTaGAGCCCATGTATCCTCATA +
Preference number: 2 (lower is better)
Translates to: CSLLLQSSGRRPGPPGPIGSSVK*SPCILI
Trigger: TATGAGGATACATGGGCTGCACTTCACAGAAGAGCC...TATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CCA 90 bp ACTGAAGTGCAACTAAGTTTACAACACAGGCCAAGAGCTGAACACACACCATGGTGCCACACAGCCGTGTaGAACCGTGGGGTTAGGGAG +
Preference number: 2 (lower is better)
Translates to: TEVQLSLQHRPRAEHTPWCHTAV*NRGVRE
Trigger: CTCCCTAACCCCACGGTTCCACACGGCTGTGTGGCA...CCATGGTGTGTGTTCAGCTCTTGGCCTGTGTTGTAAACTTAGTTGCACTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR-3UTR CCA 90 bp CCAGTGCGCAGAAAGCATGACCACCTCGCTATCCACCAGCTCTCCAGCACTTGCGTACTTTGGCAAAAATaGAACAGTCCTGGGTTTGCT +
Preference number: 2 (lower is better)
Translates to: PVRRKHDHLAIHQLSSTCVLWQK*NSPGFA
Trigger: AGCAAACCCAGGACTGTTCCATTTTTGCCAAAGTAC...GCAAGTGCTGGAGAGCTGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506844.1
ENST00000513680.5
3UTR-3UTR CCA 90 bp TTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATTTCAGCTTCATTTGCTaGGTGTGCTCCATTTCCAGG +
Preference number: 2 (lower is better)
Translates to: FSSRVQEDVQGLLVRYVHFSFIC*VCSISR
Trigger: CCTGGAAATGGAGCACACCCAGCAAATGAAGCTGAA...ATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR TCA 90 bp CAGATGGCTGAGGTGCTGCTGGGACGACTGAGCTTTGCCTTGACCCAGCCCAAAAATTTTGTGAAGGGATaGAAGGAACTGAAGTGCAAC +
Preference number: 2 (lower is better)
Translates to: QMAEVLLGRLSFALTQPKNFVKG*KELKCN
Trigger: GTTGCACTTCAGTTCCTTTCATCCCTTCACAAAATT...TTTGGGCTGGGTCAAGGCAAAGCTCAGTCGTCCCAGCAGCACCTCAGCCATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR-3UTR TCA 90 bp CAATTTAAGAGTCGCTGTCCTCACCACCATCCGGAGTGGCCTCTCTGTCAGTGTAGGGTAATCTCATTCTaGCAGGTACTGGATTCAGGC +
Preference number: 2 (lower is better)
Translates to: QFKSRCPHHHPEWPLCQCRVISF*QVLDSG
Trigger: GCCTGAATCCAGTACCTGTCAGAATGAGATTACCCT...ACACTGACAGAGAGGCCACTCCGGATGGTGGTGAGGACAGCGACTCTTAAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR GCA 90 bp ACTGAAGTGCAACTAAGTTTACAACACAGGCCAAGAGCTGAACACACACCATGGGAGTCCGCACCTCCCTaGAAACGCCAGTCCTTAACC +
Preference number: 2 (lower is better)
Translates to: TEVQLSLQHRPRAEHTPWESAPP*KRQSLT
Trigger: GGTTAAGGACTGGCGTTTGCAGGGAGGTGCGGACTC...CCATGGTGTGTGTTCAGCTCTTGGCCTGTGTTGTAAACTTAGTTGCACTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR-3UTR GCA 90 bp GCCGCTCTGCAATCTGCAGGTAGCCAGTGGACAGGTACTGCTCCATGTCCTGCTACCTCAGCCCATATTTaGTGCATGAATGTGAAACAA +
Preference number: 2 (lower is better)
Translates to: AALQSAGSQWTGTAPCPATSAHI*CMNVKQ
Trigger: TTGTTTCACATTCATGCAGCAAATATGGGCTGAGGT...AGCAGGACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGATTGCAGAGCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR-3UTR GCA 90 bp ACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTCCATCAGGTCCATCTaGTCCAGCATGTCCACGTTC +
Preference number: 2 (lower is better)
Translates to: TTWLSRWNSAYSQNWIPVSIRSI*SSMSTF
Trigger: GAACGTGGACATGCTGGAGCAGATGGACCTGATGGA...CACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR GCA 90 bp ACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGATTAAAGCTGGGAGCTaGTGGAGCTGCTCTTGCAGC +
Preference number: 2 (lower is better)
Translates to: TAKTGFQCGQTTPMSQFKIKAGS*WSCSCS
Trigger: GCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAAT...CTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CCA 90 bp GAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCAGGTCCATCTCCAGCAGAGTACTTTaGCAAAAATGGAACAGTCCT +
Preference number: 2 (lower is better)
Translates to: EFRKTSRASWSDMSIRSISSRVL*QKWNSP
Trigger: AGGACTGTTCCATTTTTGCCAAAGTACTCTGCTGGA...GATGGACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR TCA 90 bp CATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTTCTTTGGCTCTTCTGTaGAGTGCAGCCCATGTATCC +
Preference number: 2 (lower is better)
Translates to: HTAKTGFQCGQTTPMSQFSLALL*SAAHVS
Trigger: GGATACATGGGCTGCACTTCACAGAAGAGCCAAAGA...AAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR GCA 90 bp TTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATTCCAGTTGCTGGGACTaGATATGTTTGCATCTTTCT +
Preference number: 2 (lower is better)
Translates to: FSSRVQEDVQGLLVRYVHSSCWD*ICLHLS
Trigger: AGAAAGATGCAAACATATGCAGTCCCAGCAACTGGA...ATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CCA 90 bp GTGATGTGGCCAGGGCAGTGTCCACCTGAACTTCCTCCTCATCGGACTGAACAAAAGAAGAAGGTGGCTTaGCTCTTAATTCTGAGGGAT +
Preference number: 2 (lower is better)
Translates to: VMWPGQCPPELPPHRTEQKKKVA*LLILRD
Trigger: ATCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTT...TTGTTCAGTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCTGGCCACATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR CCA 90 bp TGTGAGCTTGGGGGTTTATGCGTAAGTGACTGGCAGATGGTTCTCACGTCTCACTTCAGCTTCATTTGCTaGGTGTGCTCCATTTCCAGG +
Preference number: 2 (lower is better)
Translates to: CELGGLCVSDWQMVLTSHFSFIC*VCSISR
Trigger: CCTGGAAATGGAGCACACCCAGCAAATGAAGCTGAA...GTGAGACGTGAGAACCATCTGCCAGTCACTTACGCATAAACCCCCAAGCTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR-3UTR TCA 90 bp ACCACTGCTGAGAAAGTCGGAATTACTGACCTTCAGCAGTTCTCCAATTTTATGCTGGCCTTCTCAGGATaGGGGCAAATGCACCCAAGC +
Preference number: 2 (lower is better)
Translates to: TTAEKVGITDLQQFSNFMLAFSG*GQMHPS
Trigger: GCTTGGGTGCATTTGCCCTCATCCTGAGAAGGCCAG...CATAAAATTGGAGAACTGCTGAAGGTCAGTAATTCCGACTTTCTCAGCAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR-3UTR CCA 90 bp TTCTCACGTCTCACCTTTGGAGGGGAGTGGCATCGATACTGCCCTGGTTCAGCTACTCAAATGGATTTCTaGGTGGTAAAGGAGGGAAAA +
Preference number: 2 (lower is better)
Translates to: FSRLTFGGEWHRYCPGSATQMDF*VVKEGK
Trigger: TTTTCCCTCCTTTACCACCCAGAAATCCATTTGAGT...AGCTGAACCAGGGCAGTATCGATGCCACTCCCCTCCAAAGGTGAGACGTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR-3UTR CCA 90 bp CTACCTCCTCAAAACTCGCCTCTAAATGAGTCAGATTTGCTGTCATGGATTCTAACGTCCAGGGCCTCCTaGTCCGATATGTCCATCAGG +
Preference number: 2 (lower is better)
Translates to: LPPQNSPLNESDLLSWILTSRAS*SDMSIR
Trigger: CCTGATGGACATATCGGACCAGGAGGCCCTGGACGT...TAGAATCCATGACAGCAAATCTGACTCATTTAGAGGCGAGTTTTGAGGAGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR CAA 90 bp AGCTCTCAACTCACCAAAGTTACCGGAGTGGAGCATGTCAAATCTTaGAGAAGAATTCATGACGGAACCACACCACTGTTGCAGCTGCCA +
Preference number: 2 (lower is better)
Translates to: SSQLTKVTGVEHVKS*RRIHDGTTPLLQLP
Trigger: TGGCAGCTGCAACAGTGGTGTGGTTCCGTCATGAATTCTTCTCAAAGATTTGACATGCTCCACTCCGGTAACTTTGGTGAGTTGAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR-3UTR GCA 90 bp CTCAGCCCATATTTGCTGCATGAATGTGAAACAAAATTTTGTGAAGGGATGAAACACACACCATGGCTTTaGCCATGGCAGGCACGCCCC +
Preference number: 2 (lower is better)
Translates to: LSPYLLHECETKFCEGMKHTPWL*PWQARP
Trigger: GGGGCGTGCCTGCCATGGGCAAAGCCATGGTGTGTG...TTTCATCCCTTCACAAAATTTTGTTTCACATTCATGCAGCAAATATGGGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR-3UTR GCA 90 bp TCTGCAGGTAGCCAGTGGACAGGTACTGCTCCATGTCCTGCTGGAAGGCTTCCTTCAGCCCATATTTGCTaGATGAATGTGAAACAAAAT +
Preference number: 2 (lower is better)
Translates to: SAGSQWTGTAPCPAGRLPSAHIC*MNVKQN
Trigger: ATTTTGTTTCACATTCATGCAGCAAATATGGGCTGA...AGGAAGCCTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR-3UTR GCA 90 bp CTCACCAAAGTTACCGGAGTGGAGCATGTCAAATCTTTGAGAAGAATTCATGACGGGACGACTGAGCTTTaGCTTGACCCAGCCCAAAGA +
Preference number: 2 (lower is better)
Translates to: LTKVTGVEHVKSLRRIHDGTTEL*LDPAQR
Trigger: TCTTTGGGCTGGGTCAAGGCAAAGCTCAGTCGTCCC...GTCATGAATTCTTCTCAAAGATTTGACATGCTCCACTCCGGTAACTTTGGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR-3UTR GCA 90 bp GAAGAATTCATGACGGAACCACACCACTGTTGCAGCTGCCACACAGCCGTGTGGGGGACTGCATATGTTTaGATCTTTCTAATTCACACT +
Preference number: 2 (lower is better)
Translates to: EEFMTEPHHCCSCHTAVWGTAYV*IFLIHT
Trigger: AGTGTGAATTAGAAAGATGCAAACATATGCAGTCCC...CCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTCATGAATTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR-3UTR CCA 90 bp ATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCAACTGGATTCCAGTGTaGCCAGACAACGCCCATGTC +
Preference number: 2 (lower is better)
Translates to: IKNLYKTTWLSRWNSAYSNWIPV*PDNAHV
Trigger: GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTT...GCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
3UTR-3UTR CCA 90 bp AATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCTCTATAAAACAACCTaGCTTTCCAGGTGGAATTCC +
Preference number: 2 (lower is better)
Translates to: NSAYSQNWIPVWPDNAHVLYKTT*LSRWNS
Trigger: GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAG...GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
3UTR-3UTR CCA 90 bp GCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTCCAGCAGAGTACTTTaGCAAAAATGGAACAGTCCT +
Preference number: 2 (lower is better)
Translates to: AYSQNWIPVWPDNAHVPISSRVL*QKWNSP
Trigger: AGGACTGTTCCATTTTTGCCAAAGTACTCTGCTGGA...AATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CCA 90 bp TTTTTCTTCTCCCAGTGCGCAGAAAGCATGACCACCTCGCTATCCACCAGCTCTGTACTTTGGCAAAAATaGAACAGTCCTGCCCAAAAG +
Preference number: 2 (lower is better)
Translates to: FFFSQCAESMTTSLSTSSVLWQK*NSPAQK
Trigger: CTTTTGGGCAGGACTGTTCCATTTTTGCCAAAGTAC...AGAGCTGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACTGGGAGAAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000510395.5
3UTR CAA 90 bp GAAACGCACCAAGCCCAGGTACAGGTCTGGCACCTCAGCCCATATTaGCTGCATGAATGTGAAACAAAATTTTGTGAAGGGATGAAAGGA +
Preference number: 2 (lower is better)
Translates to: ETHQAQVQVWHLSPY*LHECETKFCEGMKG
Trigger: TCCTTTCATCCCTTCACAAAATTTTGTTTCACATTCATGCAGCAAATATGGGCTGAGGTGCCAGACCTGTACCTGGGCTTGGTGCGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR-3UTR CCA 90 bp AACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACACCTGGCTTTCCAGGTaGAATTCCGCATACAGCCAA +
Preference number: 2 (lower is better)
Translates to: NLYKTTWLSRWNSAYSQNTWLSR*NSAYSQ
Trigger: TTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT...GTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
3UTR-3UTR CCA 90 bp AAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCGCCTCTATAAAACAACCTaGCTTTCCAGGTGGAATTCC +
Preference number: 2 (lower is better)
Translates to: KTGFQCGQTTPMSQFKSRLYKTT*LSRWNS
Trigger: GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAG...GCGACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR CCA 90 bp TGCTCTGCATCTAGTTCAGCTTTGAAGGTTTCAAGTTCCTTCCTCTTATTTTTCGCTGAACACACACCATaGCTTTGCCCATGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: CSASSSALKVSSSFLLFFAEHTP*LCPWQA
Trigger: TGCCTGCCATGGGCAAAGCCATGGTGTGTGTTCAGC...GAAAAATAAGAGGAAGGAACTTGAAACCTTCAAAGCTGAACTAGATGCAGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR-3UTR CCA 90 bp ACTGACCTTCAGCAGTTCTCCAATTTTATGGAACTAAATAGGCTCTTCAAGGAAGGTGAGGGTTCACGCTaGTCTCCAGTATTCTGGCCT +
Preference number: 2 (lower is better)
Translates to: TDLQQFSNFMELNRLFKEGEGSR*SPVFWP
Trigger: AGGCCAGAATACTGGAGACCAGCGTGAACCCTCACC...TTCCTTGAAGAGCCTATTTAGTTCCATAAAATTGGAGAACTGCTGAAGGTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR-3UTR CCA 90 bp CTCAGCCCATATTTGCTGCATGAATGTGAAACAAAATTTTGTGAAGGGATGAAAACGTCCAGGGCCTCCTaGTCCGATATGTCCATCAGG +
Preference number: 2 (lower is better)
Translates to: LSPYLLHECETKFCEGMKTSRAS*SDMSIR
Trigger: CCTGATGGACATATCGGACCAGGAGGCCCTGGACGT...TTTCATCCCTTCACAAAATTTTGTTTCACATTCATGCAGCAAATATGGGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR-3UTR GCA 90 bp ACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGGGGACTGCATATGTTTaGATCTTTCTAATTCACACT +
Preference number: 2 (lower is better)
Translates to: TAKTGFQCGQTTPMSQFKGTAYV*IFLIHT
Trigger: AGTGTGAATTAGAAAGATGCAAACATATGCAGTCCC...CTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CCA 90 bp AAGTCTTCCAGATGCAGCAGGTTGTTCTCTACCTCCTCAAAACTCGCCTCTAAACTCTATAAAACAACCTaGCTTTCCAGGTGGAATTCC +
Preference number: 2 (lower is better)
Translates to: KSSRCSRLFSTSSKLASKLYKTT*LSRWNS
Trigger: GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAG...TTTAGAGGCGAGTTTTGAGGAGGTAGAGAACAACCTGCTGCATCTGGAAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CCA 90 bp ACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGTCAGATTTGCTGTCATaGATTCTAAGTCTGCGATTA +
Preference number: 2 (lower is better)
Translates to: TAKTGFQCGQTTPMSQFKSDLLS*ILSLRL
Trigger: TAATCGCAGACTTAGAATCCATGACAGCAAATCTGA...CTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CCA 90 bp AACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACCTCTATAAAACAACCTaGCTTTCCAGGTGGAATTCC +
Preference number: 2 (lower is better)
Translates to: NLYKTTWLSRWNSAYSQNLYKTT*LSRWNS
Trigger: GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAG...GTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
3UTR-3UTR CCA 90 bp ACTGAAGTGCAACTAAGTTTACAACACAGGCCAAGAGCTGAACACACACCATGGACTCAAATGGATTTCTaGGTGGTAAAGGAGGGAAAA +
Preference number: 2 (lower is better)
Translates to: TEVQLSLQHRPRAEHTPWTQMDF*VVKEGK
Trigger: TTTTCCCTCCTTTACCACCCAGAAATCCATTTGAGT...CCATGGTGTGTGTTCAGCTCTTGGCCTGTGTTGTAAACTTAGTTGCACTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR-3UTR TCA 90 bp ACTGACCTTCAGCAGTTCTCCAATTTTATGGAACTAAATAGGCTCTTCAAGGAATTTGAGAAGAATTCATaGCGGAACCACACCACTGTT +
Preference number: 2 (lower is better)
Translates to: TDLQQFSNFMELNRLFKEFEKNS*RNHTTV
Trigger: AACAGTGGTGTGGTTCCGTCATGAATTCTTCTCAAA...TTCCTTGAAGAGCCTATTTAGTTCCATAAAATTGGAGAACTGCTGAAGGTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR-3UTR TCA 90 bp ACTGACCTTCAGCAGTTCTCCAATTTTATGGAACTAAATAGGCTCTTCAAGGAAAGGGATGAAAGGAACTaGAGTGCAACTAAGTTTACA +
Preference number: 2 (lower is better)
Translates to: TDLQQFSNFMELNRLFKERDERN*SATKFT
Trigger: TGTAAACTTAGTTGCACTTCAGTTCCTTTCATCCCT...TTCCTTGAAGAGCCTATTTAGTTCCATAAAATTGGAGAACTGCTGAAGGTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR-3UTR GCA 90 bp CAAGGAATCAAAATTCTATATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGACACCTCAGCCCATATTTaGTGCATGAATGTGAAACAA +
Preference number: 2 (lower is better)
Translates to: QGIKILYAGVTVSKSSPDTSAHI*CMNVKQ
Trigger: TTGTTTCACATTCATGCAGCAAATATGGGCTGAGGT...GTCAGGGGAAGATTTAGAAACAGTGACACCTGCATATAGAATTTTGATTCCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR-3UTR CCA 90 bp TGCTCTGCATCTAGTTCAGCTTTGAAGGTTTCAAGTTCCTTCCTCTTATTTTTCTCAGATTTGCTGTCATaGATTCTAAGTCTGCGATTA +
Preference number: 2 (lower is better)
Translates to: CSASSSALKVSSSFLLFFSDLLS*ILSLRL
Trigger: TAATCGCAGACTTAGAATCCATGACAGCAAATCTGA...GAAAAATAAGAGGAAGGAACTTGAAACCTTCAAAGCTGAACTAGATGCAGAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR GCA 90 bp CAAGGAATCAAAATTCTATATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGACTCAGCCCATATTTGCTaGATGAATGTGAAACAAAAT +
Preference number: 2 (lower is better)
Translates to: QGIKILYAGVTVSKSSPDSAHIC*MNVKQN
Trigger: ATTTTGTTTCACATTCATGCAGCAAATATGGGCTGA...GTCAGGGGAAGATTTAGAAACAGTGACACCTGCATATAGAATTTTGATTCCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR-3UTR CAA 90 bp CCCGTGAGCCCCGCAGGAGAGTCCGCACCTCCCTGCAAACGCCAGTCCTTAACCGGAACCACACCACTGTaGCAGCTGCCACACAGCCGT +
Preference number: 3 (lower is better)
Translates to: PVSPAGESAPPCKRQSLTGTTPL*QLPHSR
Trigger: ACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCC...GGTTAAGGACTGGCGTTTGCAGGGAGGTGCGGACTCTCCTGCGGGGCTCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR CCA 72 bp GAACCACACCACTGTTGCAGCTGCCACACAGCCGTGTaGAACCGTGGGGTTAGGGAGCCAGGAGCTGGCTGT +
Preference number: 3 (lower is better)
Translates to: EPHHCCSCHTAV*NRGVREPGAGC
Trigger: ACAGCCAGCTCCTGGCTCCCTAACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR CCA 72 bp GGTCGCCTCGCCGCTCTGCAATCTGCAGGTAGCCAGTaGACAGGTACTGCTCCATGTCCTGCTGGAAGGCTT +
Preference number: 3 (lower is better)
Translates to: GRLAALQSAGSQ*TGTAPCPAGRL
Trigger: AAGCCTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGATTGCAGAGCGGCGAGGCGACC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513680.5
3UTR CCA 72 bp TGGGCTCTCGCCGCTCTGCAATCTGCAGGTAGCCAGTaGACAGGTACTGCTCCATGTCCTGCTGGAAGGCTT +
Preference number: 3 (lower is better)
Translates to: WALAALQSAGSQ*TGTAPCPAGRL
Trigger: AAGCCTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGATTGCAGAGCGGCGAGAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506844.1
ENST00000510395.5
3UTR-3UTR CAA 90 bp AAGAGGGAAGAGTTTCCCGTGAGCCCCGCAGGAGAGTCCGCACCTCCCTGCAAACCAGCTCTCCAGCACTaGCACAGTCTTTGGCTCTTC +
Preference number: 3 (lower is better)
Translates to: KREEFPVSPAGESAPPCKPALQH*HSLWLF
Trigger: GAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTGG...TTTGCAGGGAGGTGCGGACTCTCCTGCGGGGCTCACGGGAAACTCTTCCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR CCA 72 bp TCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTaGTCCGATATGTCCATCAGGTCCATCTGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: SPPEFRKTSRAS*SDMSIRSICSS
Trigger: GCTGGAGCAGATGGACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR GCA 72 bp GAAGAATTCATGACGGAACCACACCACTGTTGCAGCTaGCACACAGCCGTGTGGAACCGTGGGGTTAGGGAG +
Preference number: 3 (lower is better)
Translates to: EEFMTEPHHCCS*HTAVWNRGVRE
Trigger: CTCCCTAACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTCATGAATTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR GCA 72 bp AGGGAGCCAGGAGCTGGCTGTGAGCTTGGGGGTTTATaGGTAAGTGACTGGCAGATGGTTCTCACGTCTCAC +
Preference number: 3 (lower is better)
Translates to: REPGAGCELGGL*VSDWQMVLTSH
Trigger: GTGAGACGTGAGAACCATCTGCCAGTCACTTACGCATAAACCCCCAAGCTCACAGCCAGCTCCTGGCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR CCA 72 bp CAATTTAAGAGTCGCTGTCCTCACCACCATCCGGAGTaGCCTCTCTGTCAGTGTGTGATGTGGCCAGGGCAG +
Preference number: 3 (lower is better)
Translates to: QFKSRCPHHHPE*PLCQCVMWPGQ
Trigger: CTGCCCTGGCCACATCACACACTGACAGAGAGGCCACTCCGGATGGTGGTGAGGACAGCGACTCTTAAATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR CAA 90 bp GTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATGCAGCTCCACGAGGCTaGTCTTTTTCTTCTCCCAGT +
Preference number: 3 (lower is better)
Translates to: VFSSPPEFRKTSRASWSDAAPRG*SFSSPS
Trigger: ACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGC...ATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR GCA 72 bp AACTTCTGCCGCTCCTTCAGCTTCATTTGCTGGGTGTaGTCCATTTCCAGGACCTTCTGGGCGTGCTCTGCA +
Preference number: 3 (lower is better)
Translates to: NFCRSFSFICWV*SISRTFWACSA
Trigger: TGCAGAGCACGCCCAGAAGGTCCTGGAAATGGAGCACACCCAGCAAATGAAGCTGAAGGAGCGGCAGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR CCA 72 bp ACTCTGGGTGAGGGTTCACGCTGGTCTCCAGTATTCTaGCCTTCTCAGGATGAGGGCAAATGCACCCAAGCT +
Preference number: 3 (lower is better)
Translates to: TLGEGSRWSPVF*PSQDEGKCTQA
Trigger: AGCTTGGGTGCATTTGCCCTCATCCTGAGAAGGCCAGAATACTGGAGACCAGCGTGAACCCTCACCCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR CCA 72 bp CTAAATCTTCCCCTGACTCTGGGTGAGGGTTCACGCTaGTCTCCAGTATTCTGGCCTTCTCAGGATGAGGGC +
Preference number: 3 (lower is better)
Translates to: LNLPLTLGEGSR*SPVFWPSQDEG
Trigger: GCCCTCATCCTGAGAAGGCCAGAATACTGGAGACCAGCGTGAACCCTCACCCAGAGTCAGGGGAAGATTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR CCA 72 bp CCGAGTCGGTGCAGGTGGAGGAAGAAGAAGGTGGCTTaGCTCTTAATTCTGAGGGATTTGGAACCTGGAGGG +
Preference number: 3 (lower is better)
Translates to: PSRCRWRKKKVA*LLILRDLEPGG
Trigger: CCCTCCAGGTTCCAAATCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTTCCTCCACCTGCACCGACTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR CCA 72 bp GTAAGTGACTGGCAGATGGTTCTCACGTCTCACCTTTaGAGGGGAGTGGCATCGATACTGCCCTGGTTCAGC +
Preference number: 3 (lower is better)
Translates to: VSDWQMVLTSHL*RGVASILPWFS
Trigger: GCTGAACCAGGGCAGTATCGATGCCACTCCCCTCCAAAGGTGAGACGTGAGAACCATCTGCCAGTCACTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR CCA 72 bp GCTGGCTGTGAGCTTGGGGGTTTATGCGTAAGTGACTaGCAGATGGTTCTCACGTCTCACCTTTGGAGGGGA +
Preference number: 3 (lower is better)
Translates to: AGCELGGLCVSD*QMVLTSHLWRG
Trigger: TCCCCTCCAAAGGTGAGACGTGAGAACCATCTGCCAGTCACTTACGCATAAACCCCCAAGCTCACAGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR-3UTR CAA 90 bp TTCCTCCTCATCGGACTGAACAACGGGGGACTCCCCACCCTCACTGATGTCCCGATCCAGCAGAGTACTTaGGCAAAAATGGAACAGTCC +
Preference number: 3 (lower is better)
Translates to: FLLIGLNNGGLPTLTDVPIQQST*AKMEQS
Trigger: GGACTGTTCCATTTTTGCCAAAGTACTCTGCTGGAT...CGGGACATCAGTGAGGGTGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR TCA 72 bp TTCACGCTGGTCTCCAGTATTCTGGCCTTCTCAGGATaGGGGCAAATGCACCCAAGCTCCTTCTCTTCCCCA +
Preference number: 3 (lower is better)
Translates to: FTLVSSILAFSG*GQMHPSSFSSP
Trigger: TGGGGAAGAGAAGGAGCTTGGGTGCATTTGCCCTCATCCTGAGAAGGCCAGAATACTGGAGACCAGCGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR TCA 72 bp GGCTTGTCTTTTTCTTCTCCCAGTGCGCAGAAAGCATaGCCACCTCGCTATCCACCAGCTCTCCAGCACTTG +
Preference number: 3 (lower is better)
Translates to: GLSFSSPSAQKA*PPRYPPALQHL
Trigger: CAAGTGCTGGAGAGCTGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACTGGGAGAAGAAAAAGACAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR GCA 72 bp TCTGCGATTAAAGCTGGGAGCTGCTGGAGCTGCTCTTaGAGCTCCACGAGGCTTGTCTTTTTCTTCTCCCAG +
Preference number: 3 (lower is better)
Translates to: SAIKAGSCWSCS*SSTRLVFFFSQ
Trigger: CTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAATCGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR GCA 72 bp GTCATGGATTCTAAGTCTGCGATTAAAGCTGGGAGCTaGTGGAGCTGCTCTTGCAGCTCCACGAGGCTTGTC +
Preference number: 3 (lower is better)
Translates to: VMDSKSAIKAGS*WSCSCSSTRLV
Trigger: GACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAATCGCAGACTTAGAATCCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR CCA 72 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTaGATTCCAGTGTGGCCAGACAACGCCCATGTCCCA +
Preference number: 3 (lower is better)
Translates to: WLSRWNSAYSQN*IPVWPDNAHVP
Trigger: TGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
3UTR CCA 72 bp GGCAGATGGTTCTCACGTCTCACCTTTGGAGGGGAGTaGCATCGATACTGCCCTGGTTCAGCTAATGCAAGT +
Preference number: 3 (lower is better)
Translates to: GRWFSRLTFGGE*HRYCPGSANAS
Trigger: ACTTGCATTAGCTGAACCAGGGCAGTATCGATGCCACTCCCCTCCAAAGGTGAGACGTGAGAACCATCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR TCA 72 bp GAAACCGTGGTAATGGTAGAACCTTCTACAGATGGCTaGGGTGCTGCTGGGACGACTGAGCTTTGCCTTGAC +
Preference number: 3 (lower is better)
Translates to: ETVVMVEPSTDG*GAAGTTELCLD
Trigger: GTCAAGGCAAAGCTCAGTCGTCCCAGCAGCACCTCAGCCATCTGTAGAAGGTTCTACCATTACCACGGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR TCA 72 bp GGTGTCACTGTTTCTAAATCTTCCCCTGACTCTGGGTaGGGGTTCACGCTGGTCTCCAGTATTCTGGCCTTC +
Preference number: 3 (lower is better)
Translates to: GVTVSKSSPDSG*GFTLVSSILAF
Trigger: GAAGGCCAGAATACTGGAGACCAGCGTGAACCCTCACCCAGAGTCAGGGGAAGATTTAGAAACAGTGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR GCA 72 bp CCTTCTCTTCCCCAGGATGACACCGTTCTGACAGATTaGCAGGAGAAGCGGGTGAGAAGTTTAGAGGAAGCT +
Preference number: 3 (lower is better)
Translates to: PSLPQDDTVLTD*QEKRVRSLEEA
Trigger: AGCTTCCTCTAAACTTCTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGTGTCATCCTGGGGAAGAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR-3UTR CAA 90 bp CGCCCATGTCCCAATTTAAGAGTCGCTGTCCTCACCACCATCCGGAGTGGCCTCGCATCTAGTTCAGCTTaGAAGGTTTCAAGTTCCTTC +
Preference number: 3 (lower is better)
Translates to: RPCPNLRVAVLTTIRSGLASSSA*KVSSSF
Trigger: GAAGGAACTTGAAACCTTCAAAGCTGAACTAGATGC...GAGGCCACTCCGGATGGTGGTGAGGACAGCGACTCTTAAATTGGGACATGGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CAA 90 bp CTCACCAAAGTTACCGGAGTGGAGCATGTCAAATCTTTGAGAAGAATTCATGACACACACACCATGGCTTaGCCCATGGCAGGCACGCCC +
Preference number: 3 (lower is better)
Translates to: LTKVTGVEHVKSLRRIHDTHTMA*PMAGTP
Trigger: GGGCGTGCCTGCCATGGGCAAAGCCATGGTGTGTGT...GTCATGAATTCTTCTCAAAGATTTGACATGCTCCACTCCGGTAACTTTGGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR-3UTR CAA 90 bp AGGACCTTCTGGGCGTGCTCTGCATCTAGTTCAGCTTTGAAGGTTTCAAGTTCCGCAGCTCCACGAGGCTaGTCTTTTTCTTCTCCCAGT +
Preference number: 3 (lower is better)
Translates to: RTFWACSASSSALKVSSSAAPRG*SFSSPS
Trigger: ACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGC...GGAACTTGAAACCTTCAAAGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR GCA 72 bp TGCTGGGTGTGCTCCATTTCCAGGACCTTCTGGGCGTaGTCTGCATCTAGTTCAGCTTTGAAGGTTTCAAGT +
Preference number: 3 (lower is better)
Translates to: CWVCSISRTFWA*SASSSALKVSS
Trigger: ACTTGAAACCTTCAAAGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAATGGAGCACACCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR GCA 72 bp TCACGTCTCACCTTTGGAGGGGAGTGGCATCGATACTaGCCTGGTTCAGCTAATGCAAGTTTGTCAACCCTA +
Preference number: 3 (lower is better)
Translates to: SRLTFGGEWHRY*PGSANASLSTL
Trigger: TAGGGTTGACAAACTTGCATTAGCTGAACCAGGGCAGTATCGATGCCACTCCCCTCCAAAGGTGAGACGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR CCA 72 bp ATGGATTCTAAGTCTGCGATTAAAGCTGGGAGCTGCTaGAGCTGCTCTTGCAGCTCCACGAGGCTTGTCTTT +
Preference number: 3 (lower is better)
Translates to: MDSKSAIKAGSC*SCSCSSTRLVF
Trigger: AAAGACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAATCGCAGACTTAGAATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CAA 90 bp CCAGCAGAGTACTTTGGCAAAAATGGAACAGTCCTGGGTTTGCTTTTCACTTTTGGAACCACACCACTGTaGCAGCTGCCACACAGCCGT +
Preference number: 3 (lower is better)
Translates to: PAEYFGKNGTVLGLLFTFGTTPL*QLPHSR
Trigger: ACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCC...AAAAGTGAAAAGCAAACCCAGGACTGTTCCATTTTTGCCAAAGTACTCTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR TCA 72 bp CGGAGTGGAGCATGTCAAATCTTTGAGAAGAATTCATaGCGGAACCACACCACTGTTGCAGCTGCCACACAG +
Preference number: 3 (lower is better)
Translates to: RSGACQIFEKNS*RNHTTVAAATQ
Trigger: CTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTCATGAATTCTTCTCAAAGATTTGACATGCTCCACTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR CCA 72 bp TTCATTTGCTGGGTGTGCTCCATTTCCAGGACCTTCTaGGCGTGCTCTGCATCTAGTTCAGCTTTGAAGGTT +
Preference number: 3 (lower is better)
Translates to: FICWVCSISRTF*ACSASSSALKV
Trigger: AACCTTCAAAGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAATGGAGCACACCCAGCAAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CAA 90 bp ACCACTGCTGAGAAAGTCGGAATTACTGACCTTCAGCAGTTCTCCAATTTTATGCACCGTTCTGACAGATaGCCAGGAGAAGCGGGTGAG +
Preference number: 3 (lower is better)
Translates to: TTAEKVGITDLQQFSNFMHRSDR*PGEAGE
Trigger: CTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGTG...CATAAAATTGGAGAACTGCTGAAGGTCAGTAATTCCGACTTTCTCAGCAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR-3UTR CAA 90 bp ACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGGAAGAAGAAGGTGGCTaGGCTCTTAATTCTGAGGGA +
Preference number: 3 (lower is better)
Translates to: TAKTGFQCGQTTPMSQFKEEEGG*ALNSEG
Trigger: TCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTTC...CTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
3UTR-3UTR CAA 90 bp ACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCGCTGTATCCAGCAGAGTACTTaGGCAAAAATGGAACAGTCC +
Preference number: 3 (lower is better)
Translates to: TGFQCGQTTPMSQFKSRCIQQST*AKMEQS
Trigger: GGACTGTTCCATTTTTGCCAAAGTACTCTGCTGGAT...ACAGCGACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CAA 90 bp CCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCTCCAGATGCAGCAGGTaGTTCTCTACCTCCTCAAAA +
Preference number: 3 (lower is better)
Translates to: PKLDSSVARQRPCPNLRVSRCSR*FSTSSK
Trigger: TTTTGAGGAGGTAGAGAACAACCTGCTGCATCTGGA...GACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
3UTR-3UTR CAA 90 bp TTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATTGGGACTGCATATGTTaGCATCTTTCTAATTCACAC +
Preference number: 3 (lower is better)
Translates to: FSSRVQEDVQGLLVRYVHWDCIC*HLSNSH
Trigger: GTGTGAATTAGAAAGATGCAAACATATGCAGTCCCA...ATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
3UTR TCA 72 bp TTGCCAGGAGAAGCGGGTGAGAAGTTTAGAGGAAGCTaGAACCGTGGTAATGGTAGAACCTTCTACAGATGG +
Preference number: 3 (lower is better)
Translates to: LPGEAGEKFRGS*NRGNGRTFYRW
Trigger: CCATCTGTAGAAGGTTCTACCATTACCACGGTTTCAGCTTCCTCTAAACTTCTCACCCGCTTCTCCTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR-3UTR CAA 90 bp TTATGCGTAAGTGACTGGCAGATGGTTCTCACGTCTCACCTTTGGAGGGGAGTGCTTGTAATTCTCCAGTaGCTGGGACTGCATATGTTT +
Preference number: 3 (lower is better)
Translates to: LCVSDWQMVLTSHLWRGVLVILQ*LGLHMF
Trigger: AAACATATGCAGTCCCAGCAACTGGAGAATTACAAG...CACTCCCCTCCAAAGGTGAGACGTGAGAACCATCTGCCAGTCACTTACGCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
3UTR-3UTR CAA 90 bp GCTGGGACGACTGAGCTTTGCCTTGACCCAGCCCAAAGAACTGGTCTGAAATTTGAGCATGTCAAATCTTaGAGAAGAATTCATGACGGA +
Preference number: 3 (lower is better)
Translates to: AGTTELCLDPAQRTGLKFEHVKS*RRIHDG
Trigger: TCCGTCATGAATTCTTCTCAAAGATTTGACATGCTC...AAATTTCAGACCAGTTCTTTGGGCTGGGTCAAGGCAAAGCTCAGTCGTCCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
3UTR CCA 72 bp ATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTaGAATTCCGCATACAGCCAAAACTGGATTCCAGTG +
Preference number: 3 (lower is better)
Translates to: IKNLYKTTWLSR*NSAYSQNWIPV
Trigger: CACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
3UTR CCA 72 bp CAAAACTCGCCTCTAAATGAGTCAGATTTGCTGTCATaGATTCTAAGTCTGCGATTAAAGCTGGGAGCTGCT +
Preference number: 3 (lower is better)
Translates to: QNSPLNESDLLS*ILSLRLKLGAA
Trigger: AGCAGCTCCCAGCTTTAATCGCAGACTTAGAATCCATGACAGCAAATCTGACTCATTTAGAGGCGAGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp GGGGGACTCCCCACCCTCACTGATGTCCCGGGTGGCCGAGTCGGTGCAGGTGGAGAGGTGAAATCCTGCTaGACGCTCAGCAGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: GGLPTLTDVPGGRVGAGGEVKSC*TLSSRS
Trigger: CGAGCGGCTGCTGAGCGTGCAGCAGGATTTCACCTC...TCCACCTGCACCGACTCGGCCACCCGGGACATCAGTGAGGGTGGGGAGTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR TCA 90 bp CCCGTGAGCCCCGCAGGAGAGTCCGCACCTCCCTGCAAACGCCAGTCCTTAACCTCCCCTGACTCTGGGTaGGGGTTCACGCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PVSPAGESAPPCKRQSLTSPDSG*GFTLVS
Trigger: GGAGACCAGCGTGAACCCTCACCCAGAGTCAGGGGA...GGTTAAGGACTGGCGTTTGCAGGGAGGTGCGGACTCTCCTGCGGGGCTCACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp TTCCTCCTCATCGGACTGAACAACGGGGGACTCCCCACCCTCACTGATGTCCCGCAGGCCTCGGGCTGCTaGTGCCTCTGTCGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: FLLIGLNNGGLPTLTDVPQASGC*CLCRPL
Trigger: CAGGGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTG...CGGGACATCAGTGAGGGTGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp CAGATGGCTGAGGTGCTGCTGGGACGACTGAGCTTTGCCTTGACCCAGCCCAAACAGGCCTCGGGCTGCTaGTGCCTCTGTCGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: QMAEVLLGRLSFALTQPKQASGC*CLCRPL
Trigger: CAGGGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTG...TTTGGGCTGGGTCAAGGCAAAGCTCAGTCGTCCCAGCAGCACCTCAGCCATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp TCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCAGGTCGCCTCGGGCTGCTGCTaGCTCTGTCGCCCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SRVQEDVQGLLVRYVHQVASGCC*LCRPLG
Trigger: ACCCAGGGGGCGACAGAGGCAGCAGCAGCCCGAGGC...GACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp ACTGTTGCAGCTGCCACACAGCCGTGTGGAACCGTGGGGTTAGGGAGCCAGGAGGGGAGCTGCTGGAGCTaGTCTTGCAGCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: TVAAATQPCGTVGLGSQEGSCWS*SCSSTR
Trigger: CCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGCTCCC...CTCCTGGCTCCCTAACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR GCA 90 bp GACGGAACCACACCACTGTTGCAGCTGCCACACAGCCGTGTGGAACCGTGGGGTCACACACCATGGCTTTaGCCATGGCAGGCACGCCCC +
Preference number: 4 (lower is better)
Translates to: DGTTPLLQLPHSRVEPWGHTPWL*PWQARP
Trigger: GGGGCGTGCCTGCCATGGGCAAAGCCATGGTGTGTG...ACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CCA 90 bp CCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAAGCCTCTGTCGCCCCCTaGGTCCCACGCCGCCAACCC +
Preference number: 4 (lower is better)
Translates to: PHTAKTGFQCGQTTPMSQASVAP*VPRRQP
Trigger: GGGTTGGCGGCGTGGGACCCAGGGGGCGACAGAGGC...TTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp CCAGTGCGCAGAAAGCATGACCACCTCGCTATCCACCAGCTCTCCAGCACTTGCACTCCCCACCCTCACTaGTGTCCCGGGTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: PVRRKHDHLAIHQLSSTCTPHPH*CPGWPS
Trigger: ACTCGGCCACCCGGGACATCAGTGAGGGTGGGGAGT...GCAAGTGCTGGAGAGCTGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
CDS-3UTR TCA 90 bp ACTGTTGCAGCTGCCACACAGCCGTGTGGAACCGTGGGGTTAGGGAGCCAGGAGGCCAGGAGCTGGCTGTaGGCTTGGGGGTTTATGCGT +
Preference number: 4 (lower is better)
Translates to: TVAAATQPCGTVGLGSQEARSWL*AWGFMR
Trigger: ACGCATAAACCCCCAAGCTCACAGCCAGCTCCTGGC...CTCCTGGCTCCCTAACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR GCA 90 bp TGGAGCTGCTCTTGCAGCTCCACGAGGCTTGTCTTTTTCTTCTCCCAGTGCGCAGCCTCGGGCTGCTGCTaGCTCTGTCGCCCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: WSCSCSSTRLVFFFSQCAASGCC*LCRPLG
Trigger: ACCCAGGGGGCGACAGAGGCAGCAGCAGCCCGAGGC...TGCGCACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp GTGATGTGGCCAGGGCAGTGTCCACCTGAACTTCCTCCTCATCGGACTGAACAACCTCAGGCCTCGGGCTaGTGCTGCCTCTGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: VMWPGQCPPELPPHRTEQPQASG*CCLCRP
Trigger: GGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTGAGG...TTGTTCAGTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCTGGCCACATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp AAGAGGGAAGAGTTTCCCGTGAGCCCCGCAGGAGAGTCCGCACCTCCCTGCAAACCGGAGGTGAAATCCTaGTGCACGCTCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: KREEFPVSPAGESAPPCKPEVKS*CTLSSR
Trigger: GCGGCTGCTGAGCGTGCAGCAGGATTTCACCTCCGG...TTTGCAGGGAGGTGCGGACTCTCCTGCGGGGCTCACGGGAAACTCTTCCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR GCA 90 bp TGGCCAGGGCAGTGTCCACCTGAACTTCCTCCTCATCGGACTGAACAACGGGGGCCGGAGGTGAAATCCTaGTGCACGCTCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: WPGQCPPELPPHRTEQRGPEVKS*CTLSSR
Trigger: GCGGCTGCTGAGCGTGCAGCAGGATTTCACCTCCGG...CCCCCGTTGTTCAGTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp GGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGGCCTCTGTCGCCCCCTaGGTCCCACGCCGCCAACCC +
Preference number: 4 (lower is better)
Translates to: GIPHTAKTGFQCGQTTPMASVAP*VPRRQP
Trigger: GGGTTGGCGGCGTGGGACCCAGGGGGCGACAGAGGC...CATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp CCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGGCCTCTGTCGCCCCCTaGGTCCCACGCCGCCAACCC +
Preference number: 4 (lower is better)
Translates to: PGGIPHTAKTGFQCGQTTASVAP*VPRRQP
Trigger: GGGTTGGCGGCGTGGGACCCAGGGGGCGACAGAGGC...CGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp CACTGTTGCAGCTGCCACACAGCCGTGTGGAACCGTGGGGTTAGGGAGCCAGGATGCCACACAGCCGTGTaGAACCGTGGGGTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: HCCSCHTAVWNRGVREPGCHTAV*NRGVRE
Trigger: CTCCCTAACCCCACGGTTCCACACGGCTGTGTGGCA...TCCTGGCTCCCTAACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CCA 90 bp CCCGTGAGCCCCGCAGGAGAGTCCGCACCTCCCTGCAAACGCCAGTCCTTAACCGGTGAGGGTTCACGCTaGTCTCCAGTATTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PVSPAGESAPPCKRQSLTGEGSR*SPVFWP
Trigger: AGGCCAGAATACTGGAGACCAGCGTGAACCCTCACC...GGTTAAGGACTGGCGTTTGCAGGGAGGTGCGGACTCTCCTGCGGGGCTCACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp ATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCGCCTCGGGCTGCTGCTaGCTCTGTCGCCCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: IPHTAKTGFQCGQTTPMSASGCC*LCRPLG
Trigger: ACCCAGGGGGCGACAGAGGCAGCAGCAGCCCGAGGC...GGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAGGCCTCGGGCTGCTaGTGCCTCTGTCGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: IPHTAKTGFQCGQTTPMSQASGC*CLCRPL
Trigger: CAGGGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTG...GGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCACAGGCCTCGGGCTGCTaGTGCCTCTGTCGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: VEFRIQPKLDSSVARQRPQASGC*CLCRPL
Trigger: CAGGGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTG...TGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp CCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCTCAGGCCTCGGGCTaGTGCTGCCTCTGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: PGGIPHTAKTGFQCGQTTPQASG*CCLCRP
Trigger: GGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTGAGG...CGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCCTCAGGCCTCGGGCTaGTGCTGCCTCTGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: IPHTAKTGFQCGQTTPMSPQASG*CCLCRP
Trigger: GGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTGAGG...GGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GACGGAACCACACCACTGTTGCAGCTGCCACACAGCCGTGTGGAACCGTGGGGTTGCTGGAGCTGCTCTTaGAGCTCCACGAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: DGTTPLLQLPHSRVEPWGCWSCS*SSTRLV
Trigger: GACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCA...ACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CCA 90 bp GACGGAACCACACCACTGTTGCAGCTGCCACACAGCCGTGTGGAACCGTGGGGTAAAGCTGGGAGCTGCTaGAGCTGCTCTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DGTTPLLQLPHSRVEPWGKAGSC*SCSCSS
Trigger: GGAGCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTT...ACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR GCA 90 bp ACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCAGGCCTCGGGCTGCTaGTGCCTCTGTCGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: TWLSRWNSAYSQNWIPVWQASGC*CLCRPL
Trigger: CAGGGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTG...CCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGACTCTGGGTGAGGGTTCACGCCCTCAGGCCTCGGGCTaGTGCTGCCTCTGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: MQVSLFLNLPLTLGEGSRPQASG*CCLCRP
Trigger: GGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTGAGG...GCGTGAACCCTCACCCAGAGTCAGGGGAAGATTTAGAAACAGTGACACCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp ACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCTCAGGCCTCGGGCTaGTGCTGCCTCTGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: TWLSRWNSAYSQNWIPVWPQASG*CCLCRP
Trigger: GGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTGAGG...CCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCACCTCAGGCCTCGGGCTaGTGCTGCCTCTGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: WLSRWNSAYSQNWIPVWPPQASG*CCLCRP
Trigger: GGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTGAGG...TGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCAGGTCCATCTGCTCCAGCGAGGTGAAATCCTGCTaGACGCTCAGCAGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: KTSRASWSDMSIRSICSSEVKSC*TLSSRS
Trigger: CGAGCGGCTGCTGAGCGTGCAGCAGGATTTCACCTC...GCTGGAGCAGATGGACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp CAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCAGGTCCAGGGAGCTGCTGGAGCTaGTCTTGCAGCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: QSSGRRPGPPGPICPSGPGSCWS*SCSSTR
Trigger: CCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGCTCCC...TGGACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp GACGGAACCACACCACTGTTGCAGCTGCCACACAGCCGTGTGGAACCGTGGGGTCCAGTGGACAGGTACTaGTCCATGTCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: DGTTPLLQLPHSRVEPWGPVDRY*SMSCWK
Trigger: CTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGG...ACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR GCA 90 bp GCCGCTCTGCAATCTGCAGGTAGCCAGTGGACAGGTACTGCTCCATGTCCTGCTGTCGCCTCGCCGCTCTaGAATCTGCAGGTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: AALQSAGSQWTGTAPCPAVASPL*NLQVAS
Trigger: ACTGGCTACCTGCAGATTGCAGAGCGGCGAGGCGAC...AGCAGGACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGATTGCAGAGCGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513680.5
CDS-3UTR CCA 90 bp AAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCGCTGCCTCTGTCGCCCCCTaGGTCCCACGCCGCCAACCC +
Preference number: 4 (lower is better)
Translates to: KLDSSVARQRPCPNLRVAASVAP*VPRRQP
Trigger: GGGTTGGCGGCGTGGGACCCAGGGGGCGACAGAGGC...AGCGACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp AAGAGGGAAGAGTTTCCCGTGAGCCCCGCAGGAGAGTCCGCACCTCCCTGCAAAACGTCCAGGGCCTCCTaGTCCGATATGTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: KREEFPVSPAGESAPPCKTSRAS*SDMSIR
Trigger: CCTGATGGACATATCGGACCAGGAGGCCCTGGACGT...TTTGCAGGGAGGTGCGGACTCTCCTGCGGGGCTCACGGGAAACTCTTCCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR TCA 90 bp GGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGACTCCCCACCCTCACTaGTGTCCCGGGTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: GIPHTAKTGFQCGQTTPMTPHPH*CPGWPS
Trigger: ACTCGGCCACCCGGGACATCAGTGAGGGTGGGGAGT...CATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp GAAGAGTTTCCCGTGAGCCCCGCAGGAGAGTCCGCACCTCCCTGCAAACGCCAGGGTCTACTGGGAGACTaGCATCACTTGGAGATGAGT +
Preference number: 4 (lower is better)
Translates to: EEFPVSPAGESAPPCKRQGLLGD*HHLEMS
Trigger: ACTCATCTCCAAGTGATGTCAGTCTCCCAGTAGACC...CTGGCGTTTGCAGGGAGGTGCGGACTCTCCTGCGGGGCTCACGGGAAACTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR GCA 90 bp GTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCAAAGGGTCTCCAGCATTaGCGCCGCCGCCGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VEFRIQPKLDSSVARQRPKGLQH*RRRRSP
Trigger: AGGAGACCGGCGGCGGCGGCAATGCTGGAGACCCTT...TGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ACAGTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGAGGTGAAATCCTGCTaGACGCTCAGCAGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: TVFSSPPEFRKTSRASWSEVKSC*TLSSRS
Trigger: CGAGCGGCTGCTGAGCGTGCAGCAGGATTTCACCTC...GGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp TGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATACCGGAGGTGAAATCCTaGTGCACGCTCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: CSLLLQSSGRRPGPPGPIPEVKS*CTLSSR
Trigger: GCGGCTGCTGAGCGTGCAGCAGGATTTCACCTCCGG...TATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp TGGCCAGGGCAGTGTCCACCTGAACTTCCTCCTCATCGGACTGAACAACGGGGGCCAGTGGACAGGTACTaGTCCATGTCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: WPGQCPPELPPHRTEQRGPVDRY*SMSCWK
Trigger: CTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGG...CCCCCGTTGTTCAGTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCTGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp CAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCAGGTCCACCATGGATGACATGCTaGCTATGGGTCGCCTCGCCG +
Preference number: 4 (lower is better)
Translates to: QSSGRRPGPPGPICPSGPPWMTC*LWVASP
Trigger: CGGCGAGGCGACCCATAGGCAGCATGTCATCCATGG...TGGACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513680.5
ENST00000515875.5
CDS-3UTR TCA 90 bp GCCGCTCTGCAATCTGCAGGTAGCCAGTGGACAGGTACTGCTCCATGTCCTGCTAGTGCGCAGAAAGCATaGCCACCTCGCTATCCACCA +
Preference number: 4 (lower is better)
Translates to: AALQSAGSQWTGTAPCPASAQKA*PPRYPP
Trigger: TGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACT...AGCAGGACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGATTGCAGAGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR TCA 90 bp CGCCCATGTCCCAATTTAAGAGTCGCTGTCCTCACCACCATCCGGAGTGGCCTCAGTGCGCAGAAAGCATaGCCACCTCGCTATCCACCA +
Preference number: 4 (lower is better)
Translates to: RPCPNLRVAVLTTIRSGLSAQKA*PPRYPP
Trigger: TGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACT...GAGGCCACTCCGGATGGTGGTGAGGACAGCGACTCTTAAATTGGGACATGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR TCA 90 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAACTCCCCACCCTCACTaGTGTCCCGGGTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: WLSRWNSAYSQNWIPVWPTPHPH*CPGWPS
Trigger: ACTCGGCCACCCGGGACATCAGTGAGGGTGGGGAGT...TGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp GCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTACTCCCCACCCTCACTaGTGTCCCGGGTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: AYSQNWIPVWPDNAHVPITPHPH*CPGWPS
Trigger: ACTCGGCCACCCGGGACATCAGTGAGGGTGGGGAGT...AATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR TCA 90 bp TGCTGGAGCTGCTCTTGCAGCTCCACGAGGCTTGTCTTTTTCTTCTCCCAGTGCGCCAGGAGCTGGCTGTaGGCTTGGGGGTTTATGCGT +
Preference number: 4 (lower is better)
Translates to: CWSCSCSSTRLVFFFSQCARSWL*AWGFMR
Trigger: ACGCATAAACCCCCAAGCTCACAGCCAGCTCCTGGC...GCACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR TCA 90 bp TTATGCGTAAGTGACTGGCAGATGGTTCTCACGTCTCACCTTTGGAGGGGAGTGGGGAAGAGTTTCCCGTaGGCCCCGCAGGAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: LCVSDWQMVLTSHLWRGVGKSFP*APQESP
Trigger: CGGACTCTCCTGCGGGGCTCACGGGAAACTCTTCCC...CACTCCCCTCCAAAGGTGAGACGTGAGAACCATCTGCCAGTCACTTACGCATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR TCA 90 bp AAGAGGGAAGAGTTTCCCGTGAGCCCCGCAGGAGAGTCCGCACCTCCCTGCAAAACACAGGCCAAGAGCTaGACACACACCATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: KREEFPVSPAGESAPPCKTQAKS*THTMAL
Trigger: CAAAGCCATGGTGTGTGTTCAGCTCTTGGCCTGTGT...TTTGCAGGGAGGTGCGGACTCTCCTGCGGGGCTCACGGGAAACTCTTCCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR TCA 90 bp GACGGAACCACACCACTGTTGCAGCTGCCACACAGCCGTGTGGAACCGTGGGGTGCTAATGGCACACACTaGCAGTCCAGTGGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: DGTTPLLQLPHSRVEPWGANGTH*QSSGLS
Trigger: TGACAAACCACTGGACTGTCAGTGTGTGCCATTAGC...ACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR GCA 90 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAAAGGGTCTCCAGCATTaGCGCCGCCGCCGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: WLSRWNSAYSQNWIPVWPKGLQH*RRRRSP
Trigger: AGGAGACCGGCGGCGGCGGCAATGCTGGAGACCCTT...TGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACAAGGGTCTCCAGCATTaGCGCCGCCGCCGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SRWNSAYSQNWIPVWPDNKGLQH*RRRRSP
Trigger: AGGAGACCGGCGGCGGCGGCAATGCTGGAGACCCTT...GTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GGGATTTGGAACCTGGAGGGTAATCTCATTCTGACAGGTACTGGATTCAGGCCCAAGGGTCTCCAGCATTaGCGCCGCCGCCGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GIWNLEGNLILTGTGFRPKGLQH*RRRRSP
Trigger: AGGAGACCGGCGGCGGCGGCAATGCTGGAGACCCTT...GGGCCTGAATCCAGTACCTGTCAGAATGAGATTACCCTCCAGGTTCCAAATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp GCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTAAGGGTCTCCAGCATTaGCGCCGCCGCCGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: AYSQNWIPVWPDNAHVPIKGLQH*RRRRSP
Trigger: AGGAGACCGGCGGCGGCGGCAATGCTGGAGACCCTT...AATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp ACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGAAGGGTCTCCAGCATTaGCGCCGCCGCCGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: TWLSRWNSAYSQNWIPVWKGLQH*RRRRSP
Trigger: AGGAGACCGGCGGCGGCGGCAATGCTGGAGACCCTT...CCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp CTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCCCGGAGGTGAAATCCTaGTGCACGCTCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LAFQVEFRIQPKLDSSVAPEVKS*CTLSSR
Trigger: GCGGCTGCTGAGCGTGCAGCAGGATTTCACCTCCGG...GGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp CAATTTAAGAGTCGCTGTCCTCACCACCATCCGGAGTGGCCTCTCTGTCAGTGTCCGGAGGTGAAATCCTaGTGCACGCTCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: QFKSRCPHHHPEWPLCQCPEVKS*CTLSSR
Trigger: GCGGCTGCTGAGCGTGCAGCAGGATTTCACCTCCGG...ACACTGACAGAGAGGCCACTCCGGATGGTGGTGAGGACAGCGACTCTTAAATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp ATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCCGGAGGTGAAATCCTaGTGCACGCTCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: IPHTAKTGFQCGQTTPMSPEVKS*CTLSSR
Trigger: GCGGCTGCTGAGCGTGCAGCAGGATTTCACCTCCGG...GGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCGGGAGCTGCTGGAGCTaGTCTTGCAGCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: RWNSAYSQNWIPVWPDNAGSCWS*SCSSTR
Trigger: CCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGCTCCC...GGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCAGGGAGCTGCTGGAGCTaGTCTTGCAGCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: VEFRIQPKLDSSVARQRPGSCWS*SCSSTR
Trigger: CCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGCTCCC...TGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCAGGTCCATCTGCTCCAGCCCAGTGGACAGGTACTaGTCCATGTCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KTSRASWSDMSIRSICSSPVDRY*SMSCWK
Trigger: CTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGG...GCTGGAGCAGATGGACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp GGGGACAGCACAGTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCCCAGTGGACAGGTACTaGTCCATGTCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GDSTVFSSPPEFRKTSRAPVDRY*SMSCWK
Trigger: CTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGG...GGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACACTGTGCTGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp CCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAAGGGCTCTCGCCGCTCTaGAATCTGCAGGTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: PHTAKTGFQCGQTTPMSQGLSPL*NLQVAS
Trigger: ACTGGCTACCTGCAGATTGCAGAGCGGCGAGAGCCC...TTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ACAGTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCCCATGGATGACATGCTaGCTATGGGCTCTCGCCGCT +
Preference number: 4 (lower is better)
Translates to: TVFSSPPEFRKTSRASWSPWMTC*LWALAA
Trigger: AGCGGCGAGAGCCCATAGGCAGCATGTCATCCATGG...GGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506844.1
ENST00000510395.5
CDS-3UTR GCA 90 bp TGGCCAGGGCAGTGTCCACCTGAACTTCCTCCTCATCGGACTGAACAACGGGGGTCCATCAGGTCCATCTaGTCCAGCATGTCCACGTTC +
Preference number: 4 (lower is better)
Translates to: WPGQCPPELPPHRTEQRGSIRSI*SSMSTF
Trigger: GAACGTGGACATGCTGGAGCAGATGGACCTGATGGA...CCCCCGTTGTTCAGTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCTGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp TTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCAGGTCCATCTGCGAACCACACCACTGTTaGAGCTGCCACACAGCCGTG +
Preference number: 4 (lower is better)
Translates to: FRKTSRASWSDMSIRSICEPHHC*SCHTAV
Trigger: CACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTC...GCAGATGGACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR CCA 90 bp ACAGTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCAAAGCTGGGAGCTGCTaGAGCTGCTCTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TVFSSPPEFRKTSRASWSKAGSC*SCSCSS
Trigger: GGAGCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTT...GGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp GTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATACGTCCAGGGCCTCCTaGTCCGATATGTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: VFSSPPEFRKTSRASWSDTSRAS*SDMSIR
Trigger: CCTGATGGACATATCGGACCAGGAGGCCCTGGACGT...ATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp CCCATGTCCCAATTTAAGAGTCGCTGTCCTCACCACCATCCGGAGTGGCCTCTCCACCACCATCCGGAGTaGCCTCTCTGTCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PMSQFKSRCPHHHPEWPLHHHPE*PLCQCV
Trigger: CACACACTGACAGAGAGGCCACTCCGGATGGTGGTG...GAGAGGCCACTCCGGATGGTGGTGAGGACAGCGACTCTTAAATTGGGACATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR TCA 90 bp CCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATCTTCAGCCCGGAGGTaGAATCCTGCTGCACGCTCA +
Preference number: 4 (lower is better)
Translates to: PHTAKTGFQCGQTTPMSQSSARR*NPAARS
Trigger: TGAGCGTGCAGCAGGATTTCACCTCCGGGCTGAAGA...TTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000515875.5
CDS-3UTR TCA 90 bp CTGAACAACGGGGGACTCCCCACCCTCACTGATGTCCCGGGTGGCCGAGTCGGTCATCTAGTTCAGCTTTaGAGGTTTCAAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LNNGGLPTLTDVPGGRVGHLVQL*RFQVPS
Trigger: GGAAGGAACTTGAAACCTTCAAAGCTGAACTAGATG...ACCGACTCGGCCACCCGGGACATCAGTGAGGGTGGGGAGTCCCCCGTTGTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR TCA 90 bp GGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCTCCTCATCGGACTaGACAACGGGGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: GIPHTAKTGFQCGQTTPMSSSSD*TTGDSP
Trigger: TGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGA...CATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp CCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAAAGGGCAGTGTCCACCTaGACTTCCTCCTCATCGGAC +
Preference number: 4 (lower is better)
Translates to: PHTAKTGFQCGQTTPMSQRAVST*TSSSSD
Trigger: GTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCT...TTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp ACAACGCCCATGTCCCAATTTAAGAGTCGCTGTCCTCACCACCATCCGGAGTGGAGGGCAGTGTCCACCTaGACTTCCTCCTCATCGGAC +
Preference number: 4 (lower is better)
Translates to: TTPMSQFKSRCPHHHPEWRAVST*TSSSSD
Trigger: GTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCT...CCACTCCGGATGGTGGTGAGGACAGCGACTCTTAAATTGGGACATGGGCGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR TCA 90 bp TTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAGGGCAGTGTCCACCTaGACTTCCTCCTCATCGGAC +
Preference number: 4 (lower is better)
Translates to: FRIQPKLDSSVARQRPCPRAVST*TSSSSD
Trigger: GTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCT...GGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp CCCGTGAGCCCCGCAGGAGAGTCCGCACCTCCCTGCAAACGCCAGTCCTTAACCTTTGAGAAGAATTCATaGCGGAACCACACCACTGTT +
Preference number: 4 (lower is better)
Translates to: PVSPAGESAPPCKRQSLTFEKNS*RNHTTV
Trigger: AACAGTGGTGTGGTTCCGTCATGAATTCTTCTCAAA...GGTTAAGGACTGGCGTTTGCAGGGAGGTGCGGACTCTCCTGCGGGGCTCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR GCA 90 bp CTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACGGGAGCTGCTGGAGCTaGTCTTGCAGCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: LSRWNSAYSQNWIPVWPDGSCWS*SCSSTR
Trigger: CCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGCTCCC...GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp CTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCGGGTGGCCGAGTCGGTaGAGGTGGAGGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LAFQVEFRIQPKLDSSVAGWPSR*RWRKKK
Trigger: CTTCTTCTTCCTCCACCTGCACCGACTCGGCCACCC...GGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGGGGTGGCCGAGTCGGTaGAGGTGGAGGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GIPHTAKTGFQCGQTTPMGWPSR*RWRKKK
Trigger: CTTCTTCTTCCTCCACCTGCACCGACTCGGCCACCC...CATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCGGGTGGCCGAGTCGGTaGAGGTGGAGGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: IPHTAKTGFQCGQTTPMSGWPSR*RWRKKK
Trigger: CTTCTTCTTCCTCCACCTGCACCGACTCGGCCACCC...GGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCGGGTGGCCGAGTCGGTaGAGGTGGAGGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RWNSAYSQNWIPVWPDNAGWPSR*RWRKKK
Trigger: CTTCTTCTTCCTCCACCTGCACCGACTCGGCCACCC...GGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGCCATGGATGACATGCTaGCTATGGGTCGCCTCGCCG +
Preference number: 4 (lower is better)
Translates to: GIPHTAKTGFQCGQTTPMPWMTC*LWVASP
Trigger: CGGCGAGGCGACCCATAGGCAGCATGTCATCCATGG...CATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp TGTGTGATGTGGCCAGGGCAGTGTCCACCTGAACTTCCTCCTCATCGGACTGAAAAAGCTGGGAGCTGCTaGAGCTGCTCTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CVMWPGQCPPELPPHRTEKAGSC*SCSCSS
Trigger: GGAGCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTT...TTCAGTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCTGGCCACATCACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp CCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAAAAAGCTGGGAGCTGCTaGAGCTGCTCTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PHTAKTGFQCGQTTPMSQKAGSC*SCSCSS
Trigger: GGAGCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTT...TTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp TCTGCAGGTAGCCAGTGGACAGGTACTGCTCCATGTCCTGCTGGAAGGCTTCCTATGACATGCTGCCTATaGGCTCTCGCCGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: SAGSQWTGTAPCPAGRLPMTCCL*ALAALQ
Trigger: TTGCAGAGCGGCGAGAGCCCATAGGCAGCATGTCAT...AGGAAGCCTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506844.1
ENST00000510395.5
CDS-3UTR CCA 90 bp AGTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATGTCAGTGTGTGATGTaGCCAGGGCAGTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: SVLFSSRVQEDVQGLLVRCQCVM*PGQCPP
Trigger: AGGTGGACACTGCCCTGGCCACATCACACACTGACA...TCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp GACCACCTCGCTATCCACCAGCTCTCCAGCACTTGCACAGTCTTTGGCTCTTCTCACCACCATCCGGAGTaGCCTCTCTGTCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: DHLAIHQLSSTCTVFGSSHHHPE*PLCQCV
Trigger: CACACACTGACAGAGAGGCCACTCCGGATGGTGGTG...AGAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTGGTGGATAGCGAGGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
CDS-3UTR TCA 90 bp CTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCTCTTCAGCCCGGAGGTaGAATCCTGCTGCACGCTCA +
Preference number: 4 (lower is better)
Translates to: LAFQVEFRIQPKLDSSVASSARR*NPAARS
Trigger: TGAGCGTGCAGCAGGATTTCACCTCCGGGCTGAAGA...GGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000515875.5
CDS-3UTR TCA 90 bp AATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCTCCTCCTCATCGGACTaGACAACGGGGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: NSAYSQNWIPVWPDNAHVSSSSD*TTGDSP
Trigger: TGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGA...GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp TCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCTGTTTCTCCACCAGGTaGCAGGCTAATGGCACACAC +
Preference number: 4 (lower is better)
Translates to: SSPPEFRKTSRASWSDMSCFSTR*QANGTH
Trigger: GTGTGTGCCATTAGCCTGTCACCTGGTGGAGAAACA...GGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506844.1
ENST00000513680.5
CDS-3UTR GCA 90 bp AACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACGCCTCGGGCTGCTGCTaGCTCTGTCGCCCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NLYKTTWLSRWNSAYSQNASGCC*LCRPLG
Trigger: ACCCAGGGGGCGACAGAGGCAGCAGCAGCCCGAGGC...GTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAGGCCTCGGGCTGCTaGTGCCTCTGTCGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: IKNLYKTTWLSRWNSAYSQASGC*CLCRPL
Trigger: CAGGGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTG...GCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAACCTCAGGCCTCGGGCTaGTGCTGCCTCTGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: RTSIKQPGFPGGIPHTAKPQASG*CCLCRP
Trigger: GGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTGAGG...TTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GCTGGGACGACTGAGCTTTGCCTTGACCCAGCCCAAAGAACTGGTCTGAAATTTGAGGTGAAATCCTGCTaGACGCTCAGCAGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: AGTTELCLDPAQRTGLKFEVKSC*TLSSRS
Trigger: CGAGCGGCTGCTGAGCGTGCAGCAGGATTTCACCTC...AAATTTCAGACCAGTTCTTTGGGCTGGGTCAAGGCAAAGCTCAGTCGTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGAGGTGAAATCCTGCTaGACGCTCAGCAGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: WLSRWNSAYSQNWIPVWPEVKSC*TLSSRS
Trigger: CGAGCGGCTGCTGAGCGTGCAGCAGGATTTCACCTC...TGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCGAGGTGAAATCCTGCTaGACGCTCAGCAGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: NSAYSQNWIPVWPDNAHVEVKSC*TLSSRS
Trigger: CGAGCGGCTGCTGAGCGTGCAGCAGGATTTCACCTC...GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGAGGTGAAATCCTGCTaGACGCTCAGCAGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: WNSAYSQNWIPVWPDNAHEVKSC*TLSSRS
Trigger: CGAGCGGCTGCTGAGCGTGCAGCAGGATTTCACCTC...ATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TGGCCAGGGCAGTGTCCACCTGAACTTCCTCCTCATCGGACTGAACAACGGGGGGGCTCTTCTGTGAAGTaGAGCCCATGTATCCTCATA +
Preference number: 4 (lower is better)
Translates to: WPGQCPPELPPHRTEQRGGSSVK*SPCILI
Trigger: TATGAGGATACATGGGCTGCACTTCACAGAAGAGCC...CCCCCGTTGTTCAGTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCTGGCCA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp CTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCTGCTGGAGCTGCTCTTaGAGCTCCACGAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LAFQVEFRIQPKLDSSVACWSCS*SSTRLV
Trigger: GACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCA...GGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCGCTGGGAGCTGCTGGAGCTaGTCTTGCAGCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: KLDSSVARQRPCPNLRVAGSCWS*SCSSTR
Trigger: CCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGCTCCC...AGCGACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp TTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCAGGTCCATCTGCAGGACCTTCTGGGCGTaGTCTGCATCTAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: FRKTSRASWSDMSIRSICRTFWA*SASSSA
Trigger: AGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCT...GCAGATGGACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp AAGAGGGAAGAGTTTCCCGTGAGCCCCGCAGGAGAGTCCGCACCTCCCTGCAAATTCATTTGCTGGGTGTaGTCCATTTCCAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: KREEFPVSPAGESAPPCKFICWV*SISRTF
Trigger: GAAGGTCCTGGAAATGGAGCACACCCAGCAAATGAA...TTTGCAGGGAGGTGCGGACTCTCCTGCGGGGCTCACGGGAAACTCTTCCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR GCA 90 bp CCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAACCAGTGGACAGGTACTaGTCCATGTCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PHTAKTGFQCGQTTPMSQPVDRY*SMSCWK
Trigger: CTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGG...TTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GCTGGGACGACTGAGCTTTGCCTTGACCCAGCCCAAAGAACTGGTCTGAAATTTGGGCTCTCGCCGCTCTaGAATCTGCAGGTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: AGTTELCLDPAQRTGLKFGLSPL*NLQVAS
Trigger: ACTGGCTACCTGCAGATTGCAGAGCGGCGAGAGCCC...AAATTTCAGACCAGTTCTTTGGGCTGGGTCAAGGCAAAGCTCAGTCGTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp TGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGGGCTCTCGCCGCTCTaGAATCTGCAGGTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: WNSAYSQNWIPVWPDNAHGLSPL*NLQVAS
Trigger: ACTGGCTACCTGCAGATTGCAGAGCGGCGAGAGCCC...ATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000622898.4
CDS-3UTR CCA 90 bp GTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCAAAAGCTGGGAGCTGCTaGAGCTGCTCTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VEFRIQPKLDSSVARQRPKAGSC*SCSCSS
Trigger: GGAGCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTT...TGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp GCCGCTCTGCAATCTGCAGGTAGCCAGTGGACAGGTACTGCTCCATGTCCTGCTATTTCCAGGACCTTCTaGGCGTGCTCTGCATCTAGT +
Preference number: 4 (lower is better)
Translates to: AALQSAGSQWTGTAPCPAISRTF*ACSASS
Trigger: ACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAAT...AGCAGGACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGATTGCAGAGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR CCA 90 bp CACCTGAACTTCCTCCTCATCGGACTGAACAACGGGGGACTCCCCACCCTCACTATTTCCAGGACCTTCTaGGCGTGCTCTGCATCTAGT +
Preference number: 4 (lower is better)
Translates to: HLNFLLIGLNNGGLPTLTISRTF*ACSASS
Trigger: ACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAAT...AGTGAGGGTGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGAAGTTCAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp CGCACCAAGCCCAGGTACAGGTCTGGCACCTCAGCCCATATTTGCTGCATGAATATGACATGCTGCCTATaGGCTCTCGCCGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: RTKPRYRSGTSAHICCMNMTCCL*ALAALQ
Trigger: TTGCAGAGCGGCGAGAGCCCATAGGCAGCATGTCAT...ATTCATGCAGCAAATATGGGCTGAGGTGCCAGACCTGTACCTGGGCTTGGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CCA 90 bp TTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCATGACATGCTGCCTATaGGCTCTCGCCGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: FRIQPKLDSSVARQRPCPMTCCL*ALAALQ
Trigger: TTGCAGAGCGGCGAGAGCCCATAGGCAGCATGTCAT...GGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000622898.4
CDS-3UTR CCA 90 bp GCTGCTGGAGCTGCTCTTGCAGCTCCACGAGGCTTGTCTTTTTCTTCTCCCAGTATGACATGCTGCCTATaGGCTCTCGCCGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: AAGAALAAPRGLSFSSPSMTCCL*ALAALQ
Trigger: TTGCAGAGCGGCGAGAGCCCATAGGCAGCATGTCAT...ACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506844.1
ENST00000510395.5
CDS-3UTR CCA 90 bp GGACAGCACAGTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCATTCTGACAGGTACTaGATTCAGGCCCTAAGGCGG +
Preference number: 4 (lower is better)
Translates to: GQHSVLFSSRVQEDVQGLHSDRY*IQALRR
Trigger: CCGCCTTAGGGCCTGAATCCAGTACCTGTCAGAATG...GAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACACTGTGCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp CAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCAGGTCCACATTCTGACAGGTACTaGATTCAGGCCCTAAGGCGG +
Preference number: 4 (lower is better)
Translates to: QSSGRRPGPPGPICPSGPHSDRY*IQALRR
Trigger: CCGCCTTAGGGCCTGAATCCAGTACCTGTCAGAATG...TGGACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp CCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCACCACCATCCGGAGTaGCCTCTCTGTCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PGGIPHTAKTGFQCGQTTHHHPE*PLCQCV
Trigger: CACACACTGACAGAGAGGCCACTCCGGATGGTGGTG...CGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp ACAGTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCAACTGGATTCCAGTGTaGCCAGACAACGCCCATGTC +
Preference number: 4 (lower is better)
Translates to: TVFSSPPEFRKTSRASWSNWIPV*PDNAHV
Trigger: GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTT...GGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp GTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATCTCACGTCTCACCTTTaGAGGGGAGTGGCATCGATA +
Preference number: 4 (lower is better)
Translates to: VFSSPPEFRKTSRASWSDLTSHL*RGVASI
Trigger: TATCGATGCCACTCCCCTCCAAAGGTGAGACGTGAG...ATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR TCA 90 bp CAGGATGACACCGTTCTGACAGATTGCCAGGAGAAGCGGGTGAGAAGTTTAGAGTCTTCAGCCCGGAGGTaGAATCCTGCTGCACGCTCA +
Preference number: 4 (lower is better)
Translates to: QDDTVLTDCQEKRVRSLESSARR*NPAARS
Trigger: TGAGCGTGCAGCAGGATTTCACCTCCGGGCTGAAGA...CTCTAAACTTCTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGTGTCATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR TCA 90 bp CTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGTGCGCAGAAAGCATaGCCACCTCGCTATCCACCA +
Preference number: 4 (lower is better)
Translates to: LAFQVEFRIQPKLDSSVASAQKA*PPRYPP
Trigger: TGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACT...GGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp GTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCAAGTGCGCAGAAAGCATaGCCACCTCGCTATCCACCA +
Preference number: 4 (lower is better)
Translates to: VEFRIQPKLDSSVARQRPSAQKA*PPRYPP
Trigger: TGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACT...TGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp ACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTCCTCCTCATCGGACTaGACAACGGGGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: TTWLSRWNSAYSQNWIPVSSSSD*TTGDSP
Trigger: TGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGA...CACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp TCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACAGGGCAGTGTCCACCTaGACTTCCTCCTCATCGGAC +
Preference number: 4 (lower is better)
Translates to: SRWNSAYSQNWIPVWPDNRAVST*TSSSSD
Trigger: GTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCT...GTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp GGGATTTGGAACCTGGAGGGTAATCTCATTCTGACAGGTACTGGATTCAGGCCCAGGGCAGTGTCCACCTaGACTTCCTCCTCATCGGAC +
Preference number: 4 (lower is better)
Translates to: GIWNLEGNLILTGTGFRPRAVST*TSSSSD
Trigger: GTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCT...GGGCCTGAATCCAGTACCTGTCAGAATGAGATTACCCTCCAGGTTCCAAATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR TCA 90 bp ACTGAAGTGCAACTAAGTTTACAACACAGGCCAAGAGCTGAACACACACCATGGGGGAAGAGTTTCCCGTaGGCCCCGCAGGAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: TEVQLSLQHRPRAEHTPWGKSFP*APQESP
Trigger: CGGACTCTCCTGCGGGGCTCACGGGAAACTCTTCCC...CCATGGTGTGTGTTCAGCTCTTGGCCTGTGTTGTAAACTTAGTTGCACTTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR TCA 90 bp CAGGATGACACCGTTCTGACAGATTGCCAGGAGAAGCGGGTGAGAAGTTTAGAGCCTTCTACAGATGGCTaGGGTGCTGCTGGGACGACT +
Preference number: 4 (lower is better)
Translates to: QDDTVLTDCQEKRVRSLEPSTDG*GAAGTT
Trigger: AGTCGTCCCAGCAGCACCTCAGCCATCTGTAGAAGG...CTCTAAACTTCTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGTGTCATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR TCA 90 bp GAAGAATTCATGACGGAACCACACCACTGTTGCAGCTGCCACACAGCCGTGTGGAGGATGACACCGTTCTaGCAGATTGCCAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: EEFMTEPHHCCSCHTAVWRMTPF*QIARRS
Trigger: GCTTCTCCTGGCAATCTGTCAGAACGGTGTCATCCT...CCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTCATGAATTCTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR TCA 90 bp GCTGGGACGACTGAGCTTTGCCTTGACCCAGCCCAAAGAACTGGTCTGAAATTTCTGGCCTTCTCAGGATaGGGGCAAATGCACCCAAGC +
Preference number: 4 (lower is better)
Translates to: AGTTELCLDPAQRTGLKFLAFSG*GQMHPS
Trigger: GCTTGGGTGCATTTGCCCTCATCCTGAGAAGGCCAG...AAATTTCAGACCAGTTCTTTGGGCTGGGTCAAGGCAAAGCTCAGTCGTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR TCA 90 bp AAGAGGGAAGAGTTTCCCGTGAGCCCCGCAGGAGAGTCCGCACCTCCCTGCAAAGAAAGTCGGAATTACTaGCCTTCAGCAGTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KREEFPVSPAGESAPPCKESRNY*PSAVLQ
Trigger: TTGGAGAACTGCTGAAGGTCAGTAATTCCGACTTTC...TTTGCAGGGAGGTGCGGACTCTCCTGCGGGGCTCACGGGAAACTCTTCCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp TCTAATTCACACTGCCCACATAAGTCTTCCAGATGCAGCAGGTTGTTCTCTACCAAGGGTCTCCAGCATTaGCGCCGCCGCCGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SNSHCPHKSSRCSRLFSTKGLQH*RRRRSP
Trigger: AGGAGACCGGCGGCGGCGGCAATGCTGGAGACCCTT...GGTAGAGAACAACCTGCTGCATCTGGAAGACTTATGTGGGCAGTGTGAATTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp AAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCGCGAGGTGAAATCCTGCTaGACGCTCAGCAGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: KTGFQCGQTTPMSQFKSREVKSC*TLSSRS
Trigger: CGAGCGGCTGCTGAGCGTGCAGCAGGATTTCACCTC...GCGACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp AACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTCCGGAGGTGAAATCCTaGTGCACGCTCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: NNLAFQVEFRIQPKLDSSPEVKS*CTLSSR
Trigger: GCGGCTGCTGAGCGTGCAGCAGGATTTCACCTCCGG...ACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCAGGTCCATCTGCTCCAGCGGCTCTTCTGTGAAGTaGAGCCCATGTATCCTCATA +
Preference number: 4 (lower is better)
Translates to: KTSRASWSDMSIRSICSSGSSVK*SPCILI
Trigger: TATGAGGATACATGGGCTGCACTTCACAGAAGAGCC...GCTGGAGCAGATGGACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp GTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATCAGCTCTCCAGCACTTaGACAGTCTTTGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VFSSPPEFRKTSRASWSDQLSST*TVFGSS
Trigger: AGAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTG...ATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp CCAGTGCGCAGAAAGCATGACCACCTCGCTATCCACCAGCTCTCCAGCACTTGCTTTTTCTTCTCCCAGTaGGCAGAAAGCATGACCACC +
Preference number: 4 (lower is better)
Translates to: PVRRKHDHLAIHQLSSTCFFFSQ*AESMTT
Trigger: GGTGGTCATGCTTTCTGCGCACTGGGAGAAGAAAAA...GCAAGTGCTGGAGAGCTGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp GGGATTTGGAACCTGGAGGGTAATCTCATTCTGACAGGTACTGGATTCAGGCCCTGCTGGAGCTGCTCTTaGAGCTCCACGAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: GIWNLEGNLILTGTGFRPCWSCS*SSTRLV
Trigger: GACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCA...GGGCCTGAATCCAGTACCTGTCAGAATGAGATTACCCTCCAGGTTCCAAATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCATGCTGGAGCTGCTCTTaGAGCTCCACGAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: WLSRWNSAYSQNWIPVWPCWSCS*SSTRLV
Trigger: GACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCA...TGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCAGGTCCATCTGCTCCAGCTTCATTTGCTGGGTGTaGTCCATTTCCAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: KTSRASWSDMSIRSICSSFICWV*SISRTF
Trigger: GAAGGTCCTGGAAATGGAGCACACCCAGCAAATGAA...GCTGGAGCAGATGGACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp GGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGCCAGTGGACAGGTACTaGTCCATGTCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GIPHTAKTGFQCGQTTPMPVDRY*SMSCWK
Trigger: CTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGG...CATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCACCAGTGGACAGGTACTaGTCCATGTCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VEFRIQPKLDSSVARQRPPVDRY*SMSCWK
Trigger: CTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGG...TGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGGGGCTCTCGCCGCTCTaGAATCTGCAGGTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: TTWLSRWNSAYSQNWIPVGLSPL*NLQVAS
Trigger: ACTGGCTACCTGCAGATTGCAGAGCGGCGAGAGCCC...CACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TCCAGGACCTTCTGGGCGTGCTCTGCATCTAGTTCAGCTTTGAAGGTTTCAAGTGGGCTCTCGCCGCTCTaGAATCTGCAGGTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SRTFWACSASSSALKVSSGLSPL*NLQVAS
Trigger: ACTGGCTACCTGCAGATTGCAGAGCGGCGAGAGCCC...ACTTGAAACCTTCAAAGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506844.1
ENST00000510395.5
CDS-3UTR GCA 90 bp TCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACCCATGGATGACATGCTaGCTATGGGCTCTCGCCGCT +
Preference number: 4 (lower is better)
Translates to: SRWNSAYSQNWIPVWPDNPWMTC*LWALAA
Trigger: AGCGGCGAGAGCCCATAGGCAGCATGTCATCCATGG...GTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000622898.4
CDS-3UTR GCA 90 bp CTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACCCATGGATGACATGCTaGCTATGGGCTCTCGCCGCT +
Preference number: 4 (lower is better)
Translates to: LSRWNSAYSQNWIPVWPDPWMTC*LWALAA
Trigger: AGCGGCGAGAGCCCATAGGCAGCATGTCATCCATGG...GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GCCCTGGTTCAGCTAATGCAAGTTTGTCAACCCTACCTAAGGCGGGGGACAGCATCCATCAGGTCCATCTaGTCCAGCATGTCCACGTTC +
Preference number: 4 (lower is better)
Translates to: ALVQLMQVCQPYLRRGTASIRSI*SSMSTF
Trigger: GAACGTGGACATGCTGGAGCAGATGGACCTGATGGA...TGCTGTCCCCCGCCTTAGGTAGGGTTGACAAACTTGCATTAGCTGAACCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR GCA 90 bp GTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATGAGTGGCATCGATACTaGCCTGGTTCAGCTAATGCA +
Preference number: 4 (lower is better)
Translates to: VFSSPPEFRKTSRASWSDEWHRY*PGSANA
Trigger: TGCATTAGCTGAACCAGGGCAGTATCGATGCCACTC...ATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR GCA 90 bp ATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGACTCTGGGTGAGGGTTCACGCGAGTCCGCACCTCCCTaGAAACGCCAGTCCTTAACC +
Preference number: 4 (lower is better)
Translates to: MQVSLFLNLPLTLGEGSRESAPP*KRQSLT
Trigger: GGTTAAGGACTGGCGTTTGCAGGGAGGTGCGGACTC...GCGTGAACCCTCACCCAGAGTCAGGGGAAGATTTAGAAACAGTGACACCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp CAGGATGACACCGTTCTGACAGATTGCCAGGAGAAGCGGGTGAGAAGTTTAGAGAGGCACGCCCCTAAATaGCTGTCGCACGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: QDDTVLTDCQEKRVRSLERHAPK*LSHEEG
Trigger: TCCCTCTTCGTGCGACAGGCATTTAGGGGCGTGCCT...CTCTAAACTTCTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGTGTCATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CCA 90 bp ACTGTTGCAGCTGCCACACAGCCGTGTGGAACCGTGGGGTTAGGGAGCCAGGAGTCCAGCAGAGTACTTTaGCAAAAATGGAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: TVAAATQPCGTVGLGSQESSRVL*QKWNSP
Trigger: AGGACTGTTCCATTTTTGCCAAAGTACTCTGCTGGA...CTCCTGGCTCCCTAACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CCA 90 bp TTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCTGCAGGTAGCCAGTaGACAGGTACTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: FSSPPEFRKTSRASWSDMSAGSQ*TGTAPC
Trigger: ACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGA...CATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp AGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCATGACATGCTGCCTATaGGCTCTCGCCGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: RWNSAYSQNWIPVWPDNAMTCCL*ALAALQ
Trigger: TTGCAGAGCGGCGAGAGCCCATAGGCAGCATGTCAT...GGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000622898.4
CDS-3UTR CCA 90 bp CTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACACGTCCAGGGCCTCCTaGTCCGATATGTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: LSRWNSAYSQNWIPVWPDTSRAS*SDMSIR
Trigger: CCTGATGGACATATCGGACCAGGAGGCCCTGGACGT...GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp AATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCACGTCCAGGGCCTCCTaGTCCGATATGTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: NSAYSQNWIPVWPDNAHVTSRAS*SDMSIR
Trigger: CCTGATGGACATATCGGACCAGGAGGCCCTGGACGT...GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp TTTTTCTTCTCCCAGTGCGCAGAAAGCATGACCACCTCGCTATCCACCAGCTCTACGTCCAGGGCCTCCTaGTCCGATATGTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: FFFSQCAESMTTSLSTSSTSRAS*SDMSIR
Trigger: CCTGATGGACATATCGGACCAGGAGGCCCTGGACGT...AGAGCTGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACTGGGAGAAGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR CCA 90 bp TGGAGCTGCTCTTGCAGCTCCACGAGGCTTGTCTTTTTCTTCTCCCAGTGCGCACATTCTGACAGGTACTaGATTCAGGCCCTAAGGCGG +
Preference number: 4 (lower is better)
Translates to: WSCSCSSTRLVFFFSQCAHSDRY*IQALRR
Trigger: CCGCCTTAGGGCCTGAATCCAGTACCTGTCAGAATG...TGCGCACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
CDS-3UTR CCA 90 bp GGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTGTCAGTGTGTGATGTaGCCAGGGCAGTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: GIPHTAKTGFQCGQTTPMCQCVM*PGQCPP
Trigger: AGGTGGACACTGCCCTGGCCACATCACACACTGACA...CATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp CTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCTGTCAGTGTGTGATGTaGCCAGGGCAGTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: LAFQVEFRIQPKLDSSVACQCVM*PGQCPP
Trigger: AGGTGGACACTGCCCTGGCCACATCACACACTGACA...GGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp AATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCACCACCATCCGGAGTaGCCTCTCTGTCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: NSAYSQNWIPVWPDNAHVHHHPE*PLCQCV
Trigger: CACACACTGACAGAGAGGCCACTCCGGATGGTGGTG...GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp TTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAACTGGATTCCAGTGTaGCCAGACAACGCCCATGTC +
Preference number: 4 (lower is better)
Translates to: FRIQPKLDSSVARQRPCPNWIPV*PDNAHV
Trigger: GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTT...GGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp GGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGGAGGTCCGGGTCTACTaGGAGACTGACATCACTTGG +
Preference number: 4 (lower is better)
Translates to: GIPHTAKTGFQCGQTTPMEVRVY*ETDITW
Trigger: CCAAGTGATGTCAGTCTCCCAGTAGACCCGGACCTC...CATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513680.5
3UTR CAA 72 bp TCTTTGAGAAGAATTCATGACGGAACCACACCACTGTaGCAGCTGCCACACAGCCGTGTGGAACCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SLRRIHDGTTPL*QLPHSRVEPWG
Trigger: ACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTCATGAATTCTTCTCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
3UTR CAA 72 bp TGGCATCGATACTGCCCTGGTTCAGCTAATGCAAGTTaGTCAACCCTACCTAAGGCGGGGGACAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: WHRYCPGSANAS*STLPKAGDSTV
Trigger: CACTGTGCTGTCCCCCGCCTTAGGTAGGGTTGACAAACTTGCATTAGCTGAACCAGGGCAGTATCGATGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR TCA 90 bp AAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCGCTTCTTCAGCCCGGAGGTaGAATCCTGCTGCACGCTCA +
Preference number: 4 (lower is better)
Translates to: KLDSSVARQRPCPNLRVASSARR*NPAARS
Trigger: TGAGCGTGCAGCAGGATTTCACCTCCGGGCTGAAGA...AGCGACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000515875.5
CDS-3UTR TCA 90 bp ATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGACTCTGGGTGAGGGTTCACGCAGTGCGCAGAAAGCATaGCCACCTCGCTATCCACCA +
Preference number: 4 (lower is better)
Translates to: MQVSLFLNLPLTLGEGSRSAQKA*PPRYPP
Trigger: TGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACT...GCGTGAACCCTCACCCAGAGTCAGGGGAAGATTTAGAAACAGTGACACCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR TCA 90 bp GTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATAGGGTAATCTCATTCTaGCAGGTACTGGATTCAGGC +
Preference number: 4 (lower is better)
Translates to: VFSSPPEFRKTSRASWSDRVISF*QVLDSG
Trigger: GCCTGAATCCAGTACCTGTCAGAATGAGATTACCCT...ATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR TCA 90 bp ACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTACTCCCCACCCTCACTaGTGTCCCGGGTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: TSIKQPGFPGGIPHTAKTTPHPH*CPGWPS
Trigger: ACTCGGCCACCCGGGACATCAGTGAGGGTGGGGAGT...AGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp GACCACCTCGCTATCCACCAGCTCTCCAGCACTTGCACAGTCTTTGGCTCTTCTGGGTTTATGCGTAAGTaGCTGGCAGATGGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: DHLAIHQLSSTCTVFGSSGFMRK*LADGSH
Trigger: GTGAGAACCATCTGCCAGTCACTTACGCATAAACCC...AGAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTGGTGGATAGCGAGGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR TCA 90 bp ACTGTTGCAGCTGCCACACAGCCGTGTGGAACCGTGGGGTTAGGGAGCCAGGAGAGGGATGAAAGGAACTaGAGTGCAACTAAGTTTACA +
Preference number: 4 (lower is better)
Translates to: TVAAATQPCGTVGLGSQERDERN*SATKFT
Trigger: TGTAAACTTAGTTGCACTTCAGTTCCTTTCATCCCT...CTCCTGGCTCCCTAACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR TCA 90 bp TGTGTGATGTGGCCAGGGCAGTGTCCACCTGAACTTCCTCCTCATCGGACTGAAGGTCTACTGGGAGACTaGCATCACTTGGAGATGAGT +
Preference number: 4 (lower is better)
Translates to: CVMWPGQCPPELPPHRTEGLLGD*HHLEMS
Trigger: ACTCATCTCCAAGTGATGTCAGTCTCCCAGTAGACC...TTCAGTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCTGGCCACATCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513680.5
CDS-3UTR GCA 90 bp ACAACGCCCATGTCCCAATTTAAGAGTCGCTGTCCTCACCACCATCCGGAGTGGCAGCTCTCCAGCACTTaGACAGTCTTTGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TTPMSQFKSRCPHHHPEWQLSST*TVFGSS
Trigger: AGAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTG...CCACTCCGGATGGTGGTGAGGACAGCGACTCTTAAATTGGGACATGGGCGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp TCCAGGACCTTCTGGGCGTGCTCTGCATCTAGTTCAGCTTTGAAGGTTTCAAGTTGCTGGAGCTGCTCTTaGAGCTCCACGAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SRTFWACSASSSALKVSSCWSCS*SSTRLV
Trigger: GACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCA...ACTTGAAACCTTCAAAGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp CCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGATTAAAGCTGGGAGCTaGTGGAGCTGCTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGGIPHTAKTGFQCGQTTIKAGS*WSCSCS
Trigger: GCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAAT...CGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGATTAAAGCTGGGAGCTaGTGGAGCTGCTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GIPHTAKTGFQCGQTTPMIKAGS*WSCSCS
Trigger: GCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAAT...CATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp CACCTGAACTTCCTCCTCATCGGACTGAACAACGGGGGACTCCCCACCCTCACTCATAAGTCTTCCAGATaGAGCAGGTTGTTCTCTACC +
Preference number: 4 (lower is better)
Translates to: HLNFLLIGLNNGGLPTLTHKSSR*SRLFST
Trigger: GGTAGAGAACAACCTGCTGCATCTGGAAGACTTATG...AGTGAGGGTGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGAAGTTCAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp GGCCAGGGCAGTGTCCACCTGAACTTCCTCCTCATCGGACTGAACAACGGGGGATCCAGTTGCTGGGACTaGATATGTTTGCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: GQGSVHLNFLLIGLNNGGSSCWD*ICLHLS
Trigger: AGAAAGATGCAAACATATGCAGTCCCAGCAACTGGA...TCCCCCGTTGTTCAGTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp CCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGAGGACCTTCTGGGCGTaGTCTGCATCTAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PGGIPHTAKTGFQCGQTTRTFWA*SASSSA
Trigger: AGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCT...CGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGAGGACCTTCTGGGCGTaGTCTGCATCTAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GIPHTAKTGFQCGQTTPMRTFWA*SASSSA
Trigger: AGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCT...CATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCAGGACCTTCTGGGCGTaGTCTGCATCTAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: IPHTAKTGFQCGQTTPMSRTFWA*SASSSA
Trigger: AGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCT...GGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCAGGACCTTCTGGGCGTaGTCTGCATCTAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RWNSAYSQNWIPVWPDNARTFWA*SASSSA
Trigger: AGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCT...GGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCTCCATCAGGTCCATCTaGTCCAGCATGTCCACGTTC +
Preference number: 4 (lower is better)
Translates to: RWNSAYSQNWIPVWPDNASIRSI*SSMSTF
Trigger: GAACGTGGACATGCTGGAGCAGATGGACCTGATGGA...GGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp AGTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATTCAGCTTCATTTGCTaGGTGTGCTCCATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SVLFSSRVQEDVQGLLVRFSFIC*VCSISR
Trigger: CCTGGAAATGGAGCACACCCAGCAAATGAAGCTGAA...TCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp CTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACATGACATGCTGCCTATaGGCTCTCGCCGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LSRWNSAYSQNWIPVWPDMTCCL*ALAALQ
Trigger: TTGCAGAGCGGCGAGAGCCCATAGGCAGCATGTCAT...GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000622898.4
CDS-3UTR CCA 90 bp AATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCATGACATGCTGCCTATaGGCTCTCGCCGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: NSAYSQNWIPVWPDNAHVMTCCL*ALAALQ
Trigger: TTGCAGAGCGGCGAGAGCCCATAGGCAGCATGTCAT...GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000622898.4
CDS-3UTR CCA 90 bp CTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCCATTCTGACAGGTACTaGATTCAGGCCCTAAGGCGG +
Preference number: 4 (lower is better)
Translates to: LAFQVEFRIQPKLDSSVAHSDRY*IQALRR
Trigger: CCGCCTTAGGGCCTGAATCCAGTACCTGTCAGAATG...GGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp ATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCATTCTGACAGGTACTaGATTCAGGCCCTAAGGCGG +
Preference number: 4 (lower is better)
Translates to: IPHTAKTGFQCGQTTPMSHSDRY*IQALRR
Trigger: CCGCCTTAGGGCCTGAATCCAGTACCTGTCAGAATG...GGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCATGTCAGTGTGTGATGTaGCCAGGGCAGTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: WLSRWNSAYSQNWIPVWPCQCVM*PGQCPP
Trigger: AGGTGGACACTGCCCTGGCCACATCACACACTGACA...TGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp TTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATGCATACAGCCAAAACTaGATTCCAGTGTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: FSSRVQEDVQGLLVRYVHAYSQN*IPVWPD
Trigger: GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGC...ATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp AATCTGCAGGTAGCCAGTGGACAGGTACTGCTCCATGTCCTGCTGGAAGGCTTCGCATACAGCCAAAACTaGATTCCAGTGTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: NLQVASGQVLLHVLLEGFAYSQN*IPVWPD
Trigger: GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGC...GAAGCCTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
CDS-3UTR CCA 90 bp TTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGACCTGGCTTTCCAGGTaGAATTCCGCATACAGCCAA +
Preference number: 4 (lower is better)
Translates to: FSSPPEFRKTSRASWSDMTWLSR*NSAYSQ
Trigger: TTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT...CATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp TTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCACCTGGCTTTCCAGGTaGAATTCCGCATACAGCCAA +
Preference number: 4 (lower is better)
Translates to: FRIQPKLDSSVARQRPCPTWLSR*NSAYSQ
Trigger: TTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT...GGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp CTCTTGCAGCTCCACGAGGCTTGTCTTTTTCTTCTCCCAGTGCGCAGAAAGCATGAGGTCCGGGTCTACTaGGAGACTGACATCACTTGG +
Preference number: 4 (lower is better)
Translates to: LLQLHEACLFLLPVRRKHEVRVY*ETDITW
Trigger: CCAAGTGATGTCAGTCTCCCAGTAGACCCGGACCTC...ATGCTTTCTGCGCACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506844.1
ENST00000513680.5
CDS-3UTR TCA 90 bp GTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATCTTTGGCTCTTCTGTaGAGTGCAGCCCATGTATCC +
Preference number: 4 (lower is better)
Translates to: VEFRIQPKLDSSVARQRPSLALL*SAAHVS
Trigger: GGATACATGGGCTGCACTTCACAGAAGAGCCAAAGA...TGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp CCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGTCTTTGGCTCTTCTGTaGAGTGCAGCCCATGTATCC +
Preference number: 4 (lower is better)
Translates to: PGGIPHTAKTGFQCGQTTSLALL*SAAHVS
Trigger: GGATACATGGGCTGCACTTCACAGAAGAGCCAAAGA...CGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp TTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAGGGTAATCTCATTCTaGCAGGTACTGGATTCAGGC +
Preference number: 4 (lower is better)
Translates to: FRIQPKLDSSVARQRPCPRVISF*QVLDSG
Trigger: GCCTGAATCCAGTACCTGTCAGAATGAGATTACCCT...GGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp TATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTACTCCCCACCCTCACTaGTGTCCCGGGTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: YKTTWLSRWNSAYSQNWITPHPH*CPGWPS
Trigger: ACTCGGCCACCCGGGACATCAGTGAGGGTGGGGAGT...AATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp TCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCTCCTCCTCATCGGACTaGACAACGGGGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: SRTSIKQPGFPGGIPHTASSSSD*TTGDSP
Trigger: TGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGA...GGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp TGTGAGCTTGGGGGTTTATGCGTAAGTGACTGGCAGATGGTTCTCACGTCTCACACACAGGCCAAGAGCTaGACACACACCATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: CELGGLCVSDWQMVLTSHTQAKS*THTMAL
Trigger: CAAAGCCATGGTGTGTGTTCAGCTCTTGGCCTGTGT...GTGAGACGTGAGAACCATCTGCCAGTCACTTACGCATAAACCCCCAAGCTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR GCA 90 bp GAAGAATTCATGACGGAACCACACCACTGTTGCAGCTGCCACACAGCCGTGTGGGGCTCTTCTGTGAAGTaGAGCCCATGTATCCTCATA +
Preference number: 4 (lower is better)
Translates to: EEFMTEPHHCCSCHTAVWGSSVK*SPCILI
Trigger: TATGAGGATACATGGGCTGCACTTCACAGAAGAGCC...CCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTCATGAATTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR GCA 90 bp TTCTCACGTCTCACCTTTGGAGGGGAGTGGCATCGATACTGCCCTGGTTCAGCTTTTTTCTTCTCCCAGTaGGCAGAAAGCATGACCACC +
Preference number: 4 (lower is better)
Translates to: FSRLTFGGEWHRYCPGSAFFFSQ*AESMTT
Trigger: GGTGGTCATGCTTTCTGCGCACTGGGAGAAGAAAAA...AGCTGAACCAGGGCAGTATCGATGCCACTCCCCTCCAAAGGTGAGACGTGAGAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR GCA 90 bp CAGGATGACACCGTTCTGACAGATTGCCAGGAGAAGCGGGTGAGAAGTTTAGAGATTAAAGCTGGGAGCTaGTGGAGCTGCTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: QDDTVLTDCQEKRVRSLEIKAGS*WSCSCS
Trigger: GCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAAT...CTCTAAACTTCTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGTGTCATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp TCTGCAGGTAGCCAGTGGACAGGTACTGCTCCATGTCCTGCTGGAAGGCTTCCTCATAAGTCTTCCAGATaGAGCAGGTTGTTCTCTACC +
Preference number: 4 (lower is better)
Translates to: SAGSQWTGTAPCPAGRLPHKSSR*SRLFST
Trigger: GGTAGAGAACAACCTGCTGCATCTGGAAGACTTATG...AGGAAGCCTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp GGGGACAGCACAGTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCAGTTGCTGGGACTaGATATGTTTGCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: GDSTVFSSPPEFRKTSRASSCWD*ICLHLS
Trigger: AGAAAGATGCAAACATATGCAGTCCCAGCAACTGGA...GGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACACTGTGCTGTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp TGGAGCTGCTCTTGCAGCTCCACGAGGCTTGTCTTTTTCTTCTCCCAGTGCGCATTCATTTGCTGGGTGTaGTCCATTTCCAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: WSCSCSSTRLVFFFSQCAFICWV*SISRTF
Trigger: GAAGGTCCTGGAAATGGAGCACACCCAGCAAATGAA...TGCGCACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp GACCACCTCGCTATCCACCAGCTCTCCAGCACTTGCACAGTCTTTGGCTCTTCTTCCTTCAGCTTCATTTaGTGGGTGTGCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: DHLAIHQLSSTCTVFGSSSFSFI*WVCSIS
Trigger: GGAAATGGAGCACACCCAGCAAATGAAGCTGAAGGA...AGAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTGGTGGATAGCGAGGTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp AACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTCCATGGATGACATGCTaGCTATGGGCTCTCGCCGCT +
Preference number: 4 (lower is better)
Translates to: NNLAFQVEFRIQPKLDSSPWMTC*LWALAA
Trigger: AGCGGCGAGAGCCCATAGGCAGCATGTCATCCATGG...ACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGACTCTGGGTGAGGGTTCACGCTCCATCAGGTCCATCTaGTCCAGCATGTCCACGTTC +
Preference number: 4 (lower is better)
Translates to: MQVSLFLNLPLTLGEGSRSIRSI*SSMSTF
Trigger: GAACGTGGACATGCTGGAGCAGATGGACCTGATGGA...GCGTGAACCCTCACCCAGAGTCAGGGGAAGATTTAGAAACAGTGACACCTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp ACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGTCCATCAGGTCCATCTaGTCCAGCATGTCCACGTTC +
Preference number: 4 (lower is better)
Translates to: TWLSRWNSAYSQNWIPVWSIRSI*SSMSTF
Trigger: GAACGTGGACATGCTGGAGCAGATGGACCTGATGGA...CCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGGGTGGCCGAGTCGGTaGAGGTGGAGGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KTTWLSRWNSAYSQNWIPGWPSR*RWRKKK
Trigger: CTTCTTCTTCCTCCACCTGCACCGACTCGGCCACCC...TGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTCGCCTCGCCGCTCTaGAATCTGCAGGTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: KTTWLSRWNSAYSQNWIPVASPL*NLQVAS
Trigger: ACTGGCTACCTGCAGATTGCAGAGCGGCGAGGCGAC...TGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp CTCAGCCCATATTTGCTGCATGAATGTGAAACAAAATTTTGTGAAGGGATGAAAGCCTCTGTCGCCCCCTaGGTCCCACGCCGCCAACCC +
Preference number: 4 (lower is better)
Translates to: LSPYLLHECETKFCEGMKASVAP*VPRRQP
Trigger: GGGTTGGCGGCGTGGGACCCAGGGGGCGACAGAGGC...TTTCATCCCTTCACAAAATTTTGTTTCACATTCATGCAGCAAATATGGGCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CCA 90 bp AACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTAAAGCTGGGAGCTGCTaGAGCTGCTCTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NNLAFQVEFRIQPKLDSSKAGSC*SCSCSS
Trigger: GGAGCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTT...ACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp CCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGATTTCCAGGACCTTCTaGGCGTGCTCTGCATCTAGT +
Preference number: 4 (lower is better)
Translates to: PGGIPHTAKTGFQCGQTTISRTF*ACSASS
Trigger: ACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAAT...CGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp TGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATTCTGCAGGTAGCCAGTaGACAGGTACTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: WNSAYSQNWIPVWPDNAHSAGSQ*TGTAPC
Trigger: ACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGA...ATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp TCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACTCTGCAGGTAGCCAGTaGACAGGTACTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: SRWNSAYSQNWIPVWPDNSAGSQ*TGTAPC
Trigger: ACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGA...GTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp GAAGAAGAAGGTGGCTTGGCTCTTAATTCTGAGGGATTTGGAACCTGGAGGGTAACGTCCAGGGCCTCCTaGTCCGATATGTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: EEEGGLALNSEGFGTWRVTSRAS*SDMSIR
Trigger: CCTGATGGACATATCGGACCAGGAGGCCCTGGACGT...TACCCTCCAGGTTCCAAATCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp TGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATCATTCTGACAGGTACTaGATTCAGGCCCTAAGGCGG +
Preference number: 4 (lower is better)
Translates to: WNSAYSQNWIPVWPDNAHHSDRY*IQALRR
Trigger: CCGCCTTAGGGCCTGAATCCAGTACCTGTCAGAATG...ATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp CACCTGAACTTCCTCCTCATCGGACTGAACAACGGGGGACTCCCCACCCTCACTAAGAAGAAGGTGGCTTaGCTCTTAATTCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: HLNFLLIGLNNGGLPTLTKKKVA*LLILRD
Trigger: ATCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTT...AGTGAGGGTGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGAAGTTCAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp AAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCGCTGTCAGTGTGTGATGTaGCCAGGGCAGTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: KTGFQCGQTTPMSQFKSRCQCVM*PGQCPP
Trigger: AGGTGGACACTGCCCTGGCCACATCACACACTGACA...GCGACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAAACTGGATTCCAGTGTaGCCAGACAACGCCCATGTC +
Preference number: 4 (lower is better)
Translates to: WLSRWNSAYSQNWIPVWPNWIPV*PDNAHV
Trigger: GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTT...TGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp TCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACAACTGGATTCCAGTGTaGCCAGACAACGCCCATGTC +
Preference number: 4 (lower is better)
Translates to: SRWNSAYSQNWIPVWPDNNWIPV*PDNAHV
Trigger: GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTT...GTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp GGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGGCATACAGCCAAAACTaGATTCCAGTGTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: GIPHTAKTGFQCGQTTPMAYSQN*IPVWPD
Trigger: GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGC...CATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp CGCCCATGTCCCAATTTAAGAGTCGCTGTCCTCACCACCATCCGGAGTGGCCTCCTCTATAAAACAACCTaGCTTTCCAGGTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: RPCPNLRVAVLTTIRSGLLYKTT*LSRWNS
Trigger: GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAG...GAGGCCACTCCGGATGGTGGTGAGGACAGCGACTCTTAAATTGGGACATGGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp GGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGACAGAAGCTCAGTGCTaGTCAAGTGAAGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GIPHTAKTGFQCGQTTPMTEAQC*SSEASS
Trigger: ACTGGAGGCTTCACTTGACCAGCACTGAGCTTCTGT...CATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462989.6
CDS-3UTR TCA 90 bp TCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCTCTTCAGCCCGGAGGTaGAATCCTGCTGCACGCTCA +
Preference number: 4 (lower is better)
Translates to: SRTSIKQPGFPGGIPHTASSARR*NPAARS
Trigger: TGAGCGTGCAGCAGGATTTCACCTCCGGGCTGAAGA...GGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000515875.5
CDS-3UTR TCA 90 bp TCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCCATCTAGTTCAGCTTTaGAGGTTTCAAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SPPEFRKTSRASWSDMSIHLVQL*RFQVPS
Trigger: GGAAGGAACTTGAAACCTTCAAAGCTGAACTAGATG...GATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR TCA 90 bp ATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCAGGGTAATCTCATTCTaGCAGGTACTGGATTCAGGC +
Preference number: 4 (lower is better)
Translates to: IPHTAKTGFQCGQTTPMSRVISF*QVLDSG
Trigger: GCCTGAATCCAGTACCTGTCAGAATGAGATTACCCT...GGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp AGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAATCCTCCTCATCGGACTaGACAACGGGGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: RTSIKQPGFPGGIPHTAKSSSSD*TTGDSP
Trigger: TGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGA...TTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp TCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAGGGCAGTGTCCACCTaGACTTCCTCCTCATCGGAC +
Preference number: 4 (lower is better)
Translates to: SRTSIKQPGFPGGIPHTARAVST*TSSSSD
Trigger: GTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCT...GGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp GGCAGATGGTTCTCACGTCTCACCTTTGGAGGGGAGTGGCATCGATACTGCCCTTTTGAGAAGAATTCATaGCGGAACCACACCACTGTT +
Preference number: 4 (lower is better)
Translates to: GRWFSRLTFGGEWHRYCPFEKNS*RNHTTV
Trigger: AACAGTGGTGTGGTTCCGTCATGAATTCTTCTCAAA...AGGGCAGTATCGATGCCACTCCCCTCCAAAGGTGAGACGTGAGAACCATCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR TCA 90 bp CCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGTCTGACTATTTTCGGTaGGTCCTGGAGATGACATGG +
Preference number: 4 (lower is better)
Translates to: PGGIPHTAKTGFQCGQTTSDYFR*VLEMTW
Trigger: CCATGTCATCTCCAGGACTCACCGAAAATAGTCAGA...CGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462989.6
CDS-3UTR GCA 90 bp TTCAAGGAATCAAAATTCTATATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGGCCTCGGGCTGCTGCTaGCTCTGTCGCCCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: FKESKFYMQVSLFLNLPLASGCC*LCRPLG
Trigger: ACCCAGGGGGCGACAGAGGCAGCAGCAGCCCGAGGC...CAGGGGAAGATTTAGAAACAGTGACACCTGCATATAGAATTTTGATTCCTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp TATGTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCCAGGCCTCGGGCTGCTaGTGCCTCTGTCGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: YVKIKNLYKTTWLSRWNSQASGC*CLCRPL
Trigger: CAGGGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTG...GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTACATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp CTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACCAGCTCTCCAGCACTTaGACAGTCTTTGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LSRWNSAYSQNWIPVWPDQLSST*TVFGSS
Trigger: AGAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTG...GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTTTTTCTTCTCCCAGTaGGCAGAAAGCATGACCACC +
Preference number: 4 (lower is better)
Translates to: GIPHTAKTGFQCGQTTPMFFFSQ*AESMTT
Trigger: GGTGGTCATGCTTTCTGCGCACTGGGAGAAGAAAAA...CATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCTTTTTCTTCTCCCAGTaGGCAGAAAGCATGACCACC +
Preference number: 4 (lower is better)
Translates to: IPHTAKTGFQCGQTTPMSFFFSQ*AESMTT
Trigger: GGTGGTCATGCTTTCTGCGCACTGGGAGAAGAAAAA...GGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCATGCTGGAGCTGCTCTTaGAGCTCCACGAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: KTTWLSRWNSAYSQNWIPCWSCS*SSTRLV
Trigger: GACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCA...TGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTGGGAGCTGCTGGAGCTaGTCTTGCAGCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: YKTTWLSRWNSAYSQNWIGSCWS*SCSSTR
Trigger: CCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGCTCCC...AATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTATTAAAGCTGGGAGCTaGTGGAGCTGCTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: AKTGFQCGQTTPMSQFKSIKAGS*WSCSCS
Trigger: GCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAAT...ACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp AAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCGCTATTAAAGCTGGGAGCTaGTGGAGCTGCTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: KLDSSVARQRPCPNLRVAIKAGS*WSCSCS
Trigger: GCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAAT...AGCGACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp TTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCCATAAGTCTTCCAGATaGAGCAGGTTGTTCTCTACC +
Preference number: 4 (lower is better)
Translates to: FRIQPKLDSSVARQRPCPHKSSR*SRLFST
Trigger: GGTAGAGAACAACCTGCTGCATCTGGAAGACTTATG...GGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AATCTGCAGGTAGCCAGTGGACAGGTACTGCTCCATGTCCTGCTGGAAGGCTTCCATAAGTCTTCCAGATaGAGCAGGTTGTTCTCTACC +
Preference number: 4 (lower is better)
Translates to: NLQVASGQVLLHVLLEGFHKSSR*SRLFST
Trigger: GGTAGAGAACAACCTGCTGCATCTGGAAGACTTATG...GAAGCCTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp TGCTGGAGCTGCTCTTGCAGCTCCACGAGGCTTGTCTTTTTCTTCTCCCAGTGCCATAAGTCTTCCAGATaGAGCAGGTTGTTCTCTACC +
Preference number: 4 (lower is better)
Translates to: CWSCSCSSTRLVFFFSQCHKSSR*SRLFST
Trigger: GGTAGAGAACAACCTGCTGCATCTGGAAGACTTATG...GCACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp CCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGTTCATTTGCTGGGTGTaGTCCATTTCCAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: PGGIPHTAKTGFQCGQTTFICWV*SISRTF
Trigger: GAAGGTCCTGGAAATGGAGCACACCCAGCAAATGAA...CGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp CCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGTCCTTCAGCTTCATTTaGTGGGTGTGCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: PGGIPHTAKTGFQCGQTTSFSFI*WVCSIS
Trigger: GGAAATGGAGCACACCCAGCAAATGAAGCTGAAGGA...CGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCTCCTTCAGCTTCATTTaGTGGGTGTGCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: IPHTAKTGFQCGQTTPMSSFSFI*WVCSIS
Trigger: GGAAATGGAGCACACCCAGCAAATGAAGCTGAAGGA...GGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGAGGGCTCTCGCCGCTCTaGAATCTGCAGGTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SIKQPGFPGGIPHTAKTGGLSPL*NLQVAS
Trigger: ACTGGCTACCTGCAGATTGCAGAGCGGCGAGAGCCC...TCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ACTGAAGTGCAACTAAGTTTACAACACAGGCCAAGAGCTGAACACACACCATGGCCATGGATGACATGCTaGCTATGGGCTCTCGCCGCT +
Preference number: 4 (lower is better)
Translates to: TEVQLSLQHRPRAEHTPWPWMTC*LWALAA
Trigger: AGCGGCGAGAGCCCATAGGCAGCATGTCATCCATGG...CCATGGTGTGTGTTCAGCTCTTGGCCTGTGTTGTAAACTTAGTTGCACTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR GCA 90 bp ATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGACTCTGGGTGAGGGTTCACGCGAGTGGCATCGATACTaGCCTGGTTCAGCTAATGCA +
Preference number: 4 (lower is better)
Translates to: MQVSLFLNLPLTLGEGSREWHRY*PGSANA
Trigger: TGCATTAGCTGAACCAGGGCAGTATCGATGCCACTC...GCGTGAACCCTCACCCAGAGTCAGGGGAAGATTTAGAAACAGTGACACCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp ACCACTGCTGAGAAAGTCGGAATTACTGACCTTCAGCAGTTCTCCAATTTTATGCACACACCATGGCTTTaGCCATGGCAGGCACGCCCC +
Preference number: 4 (lower is better)
Translates to: TTAEKVGITDLQQFSNFMHTPWL*PWQARP
Trigger: GGGGCGTGCCTGCCATGGGCAAAGCCATGGTGTGTG...CATAAAATTGGAGAACTGCTGAAGGTCAGTAATTCCGACTTTCTCAGCAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CCA 90 bp TCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACATTTCCAGGACCTTCTaGGCGTGCTCTGCATCTAGT +
Preference number: 4 (lower is better)
Translates to: SRWNSAYSQNWIPVWPDNISRTF*ACSASS
Trigger: ACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAAT...GTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp GTCATGGATTCTAAGTCTGCGATTAAAGCTGGGAGCTGCTGGAGCTGCTCTTGCATTTCCAGGACCTTCTaGGCGTGCTCTGCATCTAGT +
Preference number: 4 (lower is better)
Translates to: VMDSKSAIKAGSCWSCSCISRTF*ACSASS
Trigger: ACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAAT...GCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAATCGCAGACTTAGAATCCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR CCA 90 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAATTTCCAGGACCTTCTaGGCGTGCTCTGCATCTAGT +
Preference number: 4 (lower is better)
Translates to: WLSRWNSAYSQNWIPVWPISRTF*ACSASS
Trigger: ACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAAT...TGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp CCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGTTCAGCTTCATTTGCTaGGTGTGCTCCATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGGIPHTAKTGFQCGQTTFSFIC*VCSISR
Trigger: CCTGGAAATGGAGCACACCCAGCAAATGAAGCTGAA...CGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp GTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATTCAGCTTCATTTGCTaGGTGTGCTCCATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VEFRIQPKLDSSVARQRPFSFIC*VCSISR
Trigger: CCTGGAAATGGAGCACACCCAGCAAATGAAGCTGAA...TGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp ACCGTTCTGACAGATTGCCAGGAGAAGCGGGTGAGAAGTTTAGAGGAAGCTGAATCTGCAGGTAGCCAGTaGACAGGTACTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: TVLTDCQEKRVRSLEEAESAGSQ*TGTAPC
Trigger: ACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGA...TTCAGCTTCCTCTAAACTTCTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CCA 90 bp CCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCTCTGCAGGTAGCCAGTaGACAGGTACTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: PKLDSSVARQRPCPNLRVSAGSQ*TGTAPC
Trigger: ACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGA...GACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTAAGTTTACAACACAGGCCAAGAGCTGAACACACACCATGGACGTCCAGGGCCTCCTaGTCCGATATGTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: TEVQLSLQHRPRAEHTPWTSRAS*SDMSIR
Trigger: CCTGATGGACATATCGGACCAGGAGGCCCTGGACGT...CCATGGTGTGTGTTCAGCTCTTGGCCTGTGTTGTAAACTTAGTTGCACTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CCA 90 bp AAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAACGTCCAGGGCCTCCTaGTCCGATATGTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: KTTWLSRWNSAYSQNWIPTSRAS*SDMSIR
Trigger: CCTGATGGACATATCGGACCAGGAGGCCCTGGACGT...TGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp AAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCGCTAACTGGATTCCAGTGTaGCCAGACAACGCCCATGTC +
Preference number: 4 (lower is better)
Translates to: KLDSSVARQRPCPNLRVANWIPV*PDNAHV
Trigger: GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTT...AGCGACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp TGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGCATACAGCCAAAACTaGATTCCAGTGTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: WNSAYSQNWIPVWPDNAHAYSQN*IPVWPD
Trigger: GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGC...ATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp AATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCACCTGGCTTTCCAGGTaGAATTCCGCATACAGCCAA +
Preference number: 4 (lower is better)
Translates to: NSAYSQNWIPVWPDNAHVTWLSR*NSAYSQ
Trigger: TTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT...GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp CTCTTGCAGCTCCACGAGGCTTGTCTTTTTCTTCTCCCAGTGCGCAGAAAGCATACCTGGCTTTCCAGGTaGAATTCCGCATACAGCCAA +
Preference number: 4 (lower is better)
Translates to: LLQLHEACLFLLPVRRKHTWLSR*NSAYSQ
Trigger: TTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT...ATGCTTTCTGCGCACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGCAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
CDS-3UTR CCA 90 bp GTCCTTAACCACAAGGAGCAGACTCAAATGGATTTCTGGGTGGTAAAGGAGGGAACCTTTGGAGGGGAGTaGCATCGATACTGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: VLNHKEQTQMDFWVVKEGTFGGE*HRYCPG
Trigger: ACCAGGGCAGTATCGATGCCACTCCCCTCCAAAGGT...TCCCTCCTTTACCACCCAGAAATCCATTTGAGTCTGCTCCTTGTGGTTAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CCA 90 bp CCAGTGCGCAGAAAGCATGACCACCTCGCTATCCACCAGCTCTCCAGCACTTGCACTCAAATGGATTTCTaGGTGGTAAAGGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: PVRRKHDHLAIHQLSSTCTQMDF*VVKEGK
Trigger: TTTTCCCTCCTTTACCACCCAGAAATCCATTTGAGT...GCAAGTGCTGGAGAGCTGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR CCA 90 bp GATGACACCGTTCTGACAGATTGCCAGGAGAAGCGGGTGAGAAGTTTAGAGGAATGGTCTCCAGTATTCTaGCCTTCTCAGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: DDTVLTDCQEKRVRSLEEWSPVF*PSQDEG
Trigger: GCCCTCATCCTGAGAAGGCCAGAATACTGGAGACCA...TTCCTCTAAACTTCTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGTGTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR TCA 90 bp AAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAAGTGCGCAGAAAGCATaGCCACCTCGCTATCCACCA +
Preference number: 4 (lower is better)
Translates to: KTTWLSRWNSAYSQNWIPSAQKA*PPRYPP
Trigger: TGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACT...TGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp TTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCATCTAGTTCAGCTTTaGAGGTTTCAAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FSSRVQEDVQGLLVRYVHHLVQL*RFQVPS
Trigger: GGAAGGAACTTGAAACCTTCAAAGCTGAACTAGATG...ATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR TCA 90 bp GATGACACCGTTCTGACAGATTGCCAGGAGAAGCGGGTGAGAAGTTTAGAGGAAGGGTTTATGCGTAAGTaGCTGGCAGATGGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: DDTVLTDCQEKRVRSLEEGFMRK*LADGSH
Trigger: GTGAGAACCATCTGCCAGTCACTTACGCATAAACCC...TTCCTCTAAACTTCTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGTGTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR TCA 90 bp ATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGACTCTGGGTGAGGGTTCACGCAACTGGTCTGAAATTTaGAACGCACCAAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: MQVSLFLNLPLTLGEGSRNWSEI*NAPSPG
Trigger: ACCTGGGCTTGGTGCGTTTCAAATTTCAGACCAGTT...GCGTGAACCCTCACCCAGAGTCAGGGGAAGATTTAGAAACAGTGACACCTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR TCA 90 bp CGCACCAAGCCCAGGTACAGGTCTGGCACCTCAGCCCATATTTGCTGCATGAATAAGTTTAGAGGAAGCTaGAACCGTGGTAATGGTAGA +
Preference number: 4 (lower is better)
Translates to: RTKPRYRSGTSAHICCMNKFRGS*NRGNGR
Trigger: TCTACCATTACCACGGTTTCAGCTTCCTCTAAACTT...ATTCATGCAGCAAATATGGGCTGAGGTGCCAGACCTGTACCTGGGCTTGGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR TCA 90 bp GGGATTTGGAACCTGGAGGGTAATCTCATTCTGACAGGTACTGGATTCAGGCCCGACATCACTTGGAGATaGGTTGTTTCTCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: GIWNLEGNLILTGTGFRPDITWR*VVSPPG
Trigger: ACCTGGTGGAGAAACAACTCATCTCCAAGTGATGTC...GGGCCTGAATCCAGTACCTGTCAGAATGAGATTACCCTCCAGGTTCCAAATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513680.5
CDS-3UTR TCA 90 bp TCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGACCTCATACCCGGAGGTaGAATCCTGCTGCACGCTCA +
Preference number: 4 (lower is better)
Translates to: SIKQPGFPGGIPHTAKTGPHTRR*NPAARS
Trigger: TGAGCGTGCAGCAGGATTTCACCTCCGGGTATGAGG...TCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622898.4
CDS-3UTR GCA 90 bp GTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCACCGGAGGTGAAATCCTaGTGCACGCTCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VKIKNLYKTTWLSRWNSAPEVKS*CTLSSR
Trigger: GCGGCTGCTGAGCGTGCAGCAGGATTTCACCTCCGG...TGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGGCTCTTCTGTGAAGTaGAGCCCATGTATCCTCATA +
Preference number: 4 (lower is better)
Translates to: SRWNSAYSQNWIPVWPDNGSSVK*SPCILI
Trigger: TATGAGGATACATGGGCTGCACTTCACAGAAGAGCC...GTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TGTGAGCTTGGGGGTTTATGCGTAAGTGACTGGCAGATGGTTCTCACGTCTCACGGCTCTTCTGTGAAGTaGAGCCCATGTATCCTCATA +
Preference number: 4 (lower is better)
Translates to: CELGGLCVSDWQMVLTSHGSSVK*SPCILI
Trigger: TATGAGGATACATGGGCTGCACTTCACAGAAGAGCC...GTGAGACGTGAGAACCATCTGCCAGTCACTTACGCATAAACCCCCAAGCTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR GCA 90 bp TCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATGCTGGAGCTGCTCTTaGAGCTCCACGAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SIKQPGFPGGIPHTAKTGCWSCS*SSTRLV
Trigger: GACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCA...TCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTTGCTGGAGCTGCTCTTaGAGCTCCACGAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: TSIKQPGFPGGIPHTAKTCWSCS*SSTRLV
Trigger: GACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCA...AGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GAAGAAGAAGGTGGCTTGGCTCTTAATTCTGAGGGATTTGGAACCTGGAGGGTAATTAAAGCTGGGAGCTaGTGGAGCTGCTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: EEEGGLALNSEGFGTWRVIKAGS*WSCSCS
Trigger: GCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAAT...TACCCTCCAGGTTCCAAATCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp GTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATCTTTCTAATTCACACTaGCCACATAAGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: VFSSPPEFRKTSRASWSDLSNSH*PHKSSR
Trigger: TCTGGAAGACTTATGTGGGCAGTGTGAATTAGAAAG...ATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp TCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACTTCATTTGCTGGGTGTaGTCCATTTCCAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: SRWNSAYSQNWIPVWPDNFICWV*SISRTF
Trigger: GAAGGTCCTGGAAATGGAGCACACCCAGCAAATGAA...GTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGTTCATTTGCTGGGTGTaGTCCATTTCCAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: TWLSRWNSAYSQNWIPVWFICWV*SISRTF
Trigger: GAAGGTCCTGGAAATGGAGCACACCCAGCAAATGAA...CCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp CTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACTTCATTTGCTGGGTGTaGTCCATTTCCAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: LSRWNSAYSQNWIPVWPDFICWV*SISRTF
Trigger: GAAGGTCCTGGAAATGGAGCACACCCAGCAAATGAA...GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCATCCTTCAGCTTCATTTaGTGGGTGTGCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: WLSRWNSAYSQNWIPVWPSFSFI*WVCSIS
Trigger: GGAAATGGAGCACACCCAGCAAATGAAGCTGAAGGA...TGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACCCATGGATGACATGCTaGCTATGGGCTCTCGCCGCT +
Preference number: 4 (lower is better)
Translates to: NLYKTTWLSRWNSAYSQNPWMTC*LWALAA
Trigger: AGCGGCGAGAGCCCATAGGCAGCATGTCATCCATGG...GTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGACCATGGATGACATGCTaGCTATGGGCTCTCGCCGCT +
Preference number: 4 (lower is better)
Translates to: SIKQPGFPGGIPHTAKTGPWMTC*LWALAA
Trigger: AGCGGCGAGAGCCCATAGGCAGCATGTCATCCATGG...TCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TGCGCAGAAAGCATGACCACCTCGCTATCCACCAGCTCTCCAGCACTTGCACAGACCTCAGCCCATATTTaGTGCATGAATGTGAAACAA +
Preference number: 4 (lower is better)
Translates to: CAESMTTSLSTSSPALAQTSAHI*CMNVKQ
Trigger: TTGTTTCACATTCATGCAGCAAATATGGGCTGAGGT...CTGTGCAAGTGCTGGAGAGCTGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR CCA 90 bp TCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACTTCAGCTTCATTTGCTaGGTGTGCTCCATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SRWNSAYSQNWIPVWPDNFSFIC*VCSISR
Trigger: CCTGGAAATGGAGCACACCCAGCAAATGAAGCTGAA...GTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp ATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCACGTCCAGGGCCTCCTaGTCCGATATGTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: IKNLYKTTWLSRWNSAYSTSRAS*SDMSIR
Trigger: CCTGATGGACATATCGGACCAGGAGGCCCTGGACGT...GCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp AGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAACACCACCATCCGGAGTaGCCTCTCTGTCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RTSIKQPGFPGGIPHTAKHHHPE*PLCQCV
Trigger: CACACACTGACAGAGAGGCCACTCCGGATGGTGGTG...TTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp GTCAAATCTTTGAGAAGAATTCATGACGGAACCACACCACTGTTGCAGCTGCCAGCTGAACACACACCATaGCTTTGCCCATGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VKSLRRIHDGTTPLLQLPAEHTP*LCPWQA
Trigger: TGCCTGCCATGGGCAAAGCCATGGTGTGTGTTCAGC...TGGCAGCTGCAACAGTGGTGTGGTTCCGTCATGAATTCTTCTCAAAGATTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CCA 90 bp AAGTCTTCCAGATGCAGCAGGTTGTTCTCTACCTCCTCAAAACTCGCCTCTAAAGCTGAACACACACCATaGCTTTGCCCATGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KSSRCSRLFSTSSKLASKAEHTP*LCPWQA
Trigger: TGCCTGCCATGGGCAAAGCCATGGTGTGTGTTCAGC...TTTAGAGGCGAGTTTTGAGGAGGTAGAGAACAACCTGCTGCATCTGGAAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR CCA 90 bp TTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCGTACTTTGGCAAAAATaGAACAGTCCTGCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: FRIQPKLDSSVARQRPCPVLWQK*NSPAQK
Trigger: CTTTTGGGCAGGACTGTTCCATTTTTGCCAAAGTAC...GGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510395.5
CDS-3UTR TCA 90 bp AACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTTCTTTGGCTCTTCTGTaGAGTGCAGCCCATGTATCC +
Preference number: 4 (lower is better)
Translates to: NNLAFQVEFRIQPKLDSSSLALL*SAAHVS
Trigger: GGATACATGGGCTGCACTTCACAGAAGAGCCAAAGA...ACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp AAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACTCCTCCTCATCGGACTaGACAACGGGGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: KIKNLYKTTWLSRWNSAYSSSSD*TTGDSP
Trigger: TGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGA...GTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp TATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTAGGGCAGTGTCCACCTaGACTTCCTCCTCATCGGAC +
Preference number: 4 (lower is better)
Translates to: YKTTWLSRWNSAYSQNWIRAVST*TSSSSD
Trigger: GTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCT...AATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp TTCTCACGTCTCACCTTTGGAGGGGAGTGGCATCGATACTGCCCTGGTTCAGCTAGGGATGAAAGGAACTaGAGTGCAACTAAGTTTACA +
Preference number: 4 (lower is better)
Translates to: FSRLTFGGEWHRYCPGSARDERN*SATKFT
Trigger: TGTAAACTTAGTTGCACTTCAGTTCCTTTCATCCCT...AGCTGAACCAGGGCAGTATCGATGCCACTCCCCTCCAAAGGTGAGACGTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR TCA 90 bp TCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATCAGTGCTGGTCAAGTaGAGCCTCCAGTTACCAGGC +
Preference number: 4 (lower is better)
Translates to: SIKQPGFPGGIPHTAKTGSVLVK*SLQLPG
Trigger: GCCTGGTAACTGGAGGCTTCACTTGACCAGCACTGA...TCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462989.6
CDS-3UTR TCA 90 bp GAAGAAGAAGGTGGCTTGGCTCTTAATTCTGAGGGATTTGGAACCTGGAGGGTAGCTAATGGCACACACTaGCAGTCCAGTGGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: EEEGGLALNSEGFGTWRVANGTH*QSSGLS
Trigger: TGACAAACCACTGGACTGTCAGTGTGTGCCATTAGC...TACCCTCCAGGTTCCAAATCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513680.5
CDS-3UTR TCA 90 bp TCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCTGTTTCTCCACCAGGTaGCAGGCTAATGGCACACAC +
Preference number: 4 (lower is better)
Translates to: SRTSIKQPGFPGGIPHTACFSTR*QANGTH
Trigger: GTGTGTGCCATTAGCCTGTCACCTGGTGGAGAAACA...GGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513680.5
CDS-3UTR GCA 90 bp TTCAAGGAATCAAAATTCTATATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGAAGGGTCTCCAGCATTaGCGCCGCCGCCGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FKESKFYMQVSLFLNLPLKGLQH*RRRRSP
Trigger: AGGAGACCGGCGGCGGCGGCAATGCTGGAGACCCTT...CAGGGGAAGATTTAGAAACAGTGACACCTGCATATAGAATTTTGATTCCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp AACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTCAGCTCTCCAGCACTTaGACAGTCTTTGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: NNLAFQVEFRIQPKLDSSQLSST*TVFGSS
Trigger: AGAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTG...ACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTTTTTCTTCTCCCAGTaGGCAGAAAGCATGACCACC +
Preference number: 4 (lower is better)
Translates to: TTWLSRWNSAYSQNWIPVFFFSQ*AESMTT
Trigger: GGTGGTCATGCTTTCTGCGCACTGGGAGAAGAAAAA...CACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp CCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGTCCAGTTGCTGGGACTaGATATGTTTGCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: PGGIPHTAKTGFQCGQTTSSCWD*ICLHLS
Trigger: AGAAAGATGCAAACATATGCAGTCCCAGCAACTGGA...CGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGTTCATTTGCTGGGTGTaGTCCATTTCCAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: TAKTGFQCGQTTPMSQFKFICWV*SISRTF
Trigger: GAAGGTCCTGGAAATGGAGCACACCCAGCAAATGAA...CTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp AGGACCTTCTGGGCGTGCTCTGCATCTAGTTCAGCTTTGAAGGTTTCAAGTTCCTCCTTCAGCTTCATTTaGTGGGTGTGCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: RTFWACSASSSALKVSSSSFSFI*WVCSIS
Trigger: GGAAATGGAGCACACCCAGCAAATGAAGCTGAAGGA...GGAACTTGAAACCTTCAAAGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp AGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAACCAGTGGACAGGTACTaGTCCATGTCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RTSIKQPGFPGGIPHTAKPVDRY*SMSCWK
Trigger: CTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGG...TTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCTCCATCAGGTCCATCTaGTCCAGCATGTCCACGTTC +
Preference number: 4 (lower is better)
Translates to: SRTSIKQPGFPGGIPHTASIRSI*SSMSTF
Trigger: GAACGTGGACATGCTGGAGCAGATGGACCTGATGGA...GGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCAGGGTGGCCGAGTCGGTaGAGGTGGAGGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VKIKNLYKTTWLSRWNSAGWPSR*RWRKKK
Trigger: CTTCTTCTTCCTCCACCTGCACCGACTCGGCCACCC...TGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ACCACTGCTGAGAAAGTCGGAATTACTGACCTTCAGCAGTTCTCCAATTTTATGGAACCACACCACTGTTaGAGCTGCCACACAGCCGTG +
Preference number: 4 (lower is better)
Translates to: TTAEKVGITDLQQFSNFMEPHHC*SCHTAV
Trigger: CACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTC...CATAAAATTGGAGAACTGCTGAAGGTCAGTAATTCCGACTTTCTCAGCAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp CTCACCAAAGTTACCGGAGTGGAGCATGTCAAATCTTTGAGAAGAATTCATGACGAGTCCGCACCTCCCTaGAAACGCCAGTCCTTAACC +
Preference number: 4 (lower is better)
Translates to: LTKVTGVEHVKSLRRIHDESAPP*KRQSLT
Trigger: GGTTAAGGACTGGCGTTTGCAGGGAGGTGCGGACTC...GTCATGAATTCTTCTCAAAGATTTGACATGCTCCACTCCGGTAACTTTGGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR GCA 90 bp TCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGACAGTTACCAGGCAGCTaGCCTCACGTGCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: SIKQPGFPGGIPHTAKTGQLPGS*PHVHLL
Trigger: CAGAAGATGCACGTGAGGGCAGCTGCCTGGTAACTG...TCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462989.6
CDS-3UTR CCA 90 bp GTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCAGTACTTTGGCAAAAATaGAACAGTCCTGGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: VEFRIQPKLDSSVARQRPVLWQK*NSPGFA
Trigger: AGCAAACCCAGGACTGTTCCATTTTTGCCAAAGTAC...TGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344537.10
ENST00000513680.5
CDS-3UTR CCA 90 bp GTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATCCAGCAGAGTACTTTaGCAAAAATGGAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: VEFRIQPKLDSSVARQRPSSRVL*QKWNSP
Trigger: AGGACTGTTCCATTTTTGCCAAAGTACTCTGCTGGA...TGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344537.10
ENST00000510395.5
ENST00000513680.5
CDS-3UTR CCA 90 bp TCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCTCAGATTTGCTGTCATaGATTCTAAGTCTGCGATTA +
Preference number: 4 (lower is better)
Translates to: SSPPEFRKTSRASWSDMSSDLLS*ILSLRL
Trigger: TAATCGCAGACTTAGAATCCATGACAGCAAATCTGA...GGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp AACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTATTTCCAGGACCTTCTaGGCGTGCTCTGCATCTAGT +
Preference number: 4 (lower is better)
Translates to: NNLAFQVEFRIQPKLDSSISRTF*ACSASS
Trigger: ACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAAT...ACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp CATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTTTCAGCTTCATTTGCTaGGTGTGCTCCATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HTAKTGFQCGQTTPMSQFFSFIC*VCSISR
Trigger: CCTGGAAATGGAGCACACCCAGCAAATGAAGCTGAA...AAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp AGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCAAGAAGAAGGTGGCTTaGCTCTTAATTCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: RWNSAYSQNWIPVWPDNAKKKVA*LLILRD
Trigger: ATCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTT...GGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp GAAGGTGGCTTGGCTCTTAATTCTGAGGGATTTGGAACCTGGAGGGTAATCTCAACCTGGCTTTCCAGGTaGAATTCCGCATACAGCCAA +
Preference number: 4 (lower is better)
Translates to: EGGLALNSEGFGTWRVISTWLSR*NSAYSQ
Trigger: TTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT...TGAGATTACCCTCCAGGTTCCAAATCCCTCAGAATTAAGAGCCAAGCCACCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp GTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCACTCTATAAAACAACCTaGCTTTCCAGGTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: VEFRIQPKLDSSVARQRPLYKTT*LSRWNS
Trigger: GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAG...TGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp ATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCTCTATAAAACAACCTaGCTTTCCAGGTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: IPHTAKTGFQCGQTTPMSLYKTT*LSRWNS
Trigger: GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAG...GGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp ATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGACTCTGGGTGAGGGTTCACGCTTATGCGTAAGTGACTaGCAGATGGTTCTCACGTCT +
Preference number: 4 (lower is better)
Translates to: MQVSLFLNLPLTLGEGSRLCVSD*QMVLTS
Trigger: AGACGTGAGAACCATCTGCCAGTCACTTACGCATAA...GCGTGAACCCTCACCCAGAGTCAGGGGAAGATTTAGAAACAGTGACACCTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CCA 90 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCACTCACGTGCATCTTCTaGGATGTAGAACAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: WLSRWNSAYSQNWIPVWPLTCIF*DVEQRK
Trigger: CTTCCTTTGTTCTACATCCCAGAAGATGCACGTGAG...TGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462989.6
CDS-3UTR TCA 90 bp AAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCATCTTTGGCTCTTCTGTaGAGTGCAGCCCATGTATCC +
Preference number: 4 (lower is better)
Translates to: KTTWLSRWNSAYSQNWIPSLALL*SAAHVS
Trigger: GGATACATGGGCTGCACTTCACAGAAGAGCCAAAGA...TGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp TATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTAGTGCGCAGAAAGCATaGCCACCTCGCTATCCACCA +
Preference number: 4 (lower is better)
Translates to: YKTTWLSRWNSAYSQNWISAQKA*PPRYPP
Trigger: TGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACT...AATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp CTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACCATCTAGTTCAGCTTTaGAGGTTTCAAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LSRWNSAYSQNWIPVWPDHLVQL*RFQVPS
Trigger: GGAAGGAACTTGAAACCTTCAAAGCTGAACTAGATG...GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp AATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCATCTAGTTCAGCTTTaGAGGTTTCAAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: NSAYSQNWIPVWPDNAHVHLVQL*RFQVPS
Trigger: GGAAGGAACTTGAAACCTTCAAAGCTGAACTAGATG...GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCACATCTAGTTCAGCTTTaGAGGTTTCAAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: WLSRWNSAYSQNWIPVWPHLVQL*RFQVPS
Trigger: GGAAGGAACTTGAAACCTTCAAAGCTGAACTAGATG...TGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp AACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTAGGGTAATCTCATTCTaGCAGGTACTGGATTCAGGC +
Preference number: 4 (lower is better)
Translates to: NNLAFQVEFRIQPKLDSSRVISF*QVLDSG
Trigger: GCCTGAATCCAGTACCTGTCAGAATGAGATTACCCT...ACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp GTCAAATCTTTGAGAAGAATTCATGACGGAACCACACCACTGTTGCAGCTGCCATTCTCTTCCCCAGGATaGCACCGTTCTGACAGATTG +
Preference number: 4 (lower is better)
Translates to: VKSLRRIHDGTTPLLQLPFSSPG*HRSDRL
Trigger: CAATCTGTCAGAACGGTGTCATCCTGGGGAAGAGAA...TGGCAGCTGCAACAGTGGTGTGGTTCCGTCATGAATTCTTCTCAAAGATTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp AAGTCTTCCAGATGCAGCAGGTTGTTCTCTACCTCCTCAAAACTCGCCTCTAAACAGCTCTCCAGCACTTaGACAGTCTTTGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KSSRCSRLFSTSSKLASKQLSST*TVFGSS
Trigger: AGAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTG...TTTAGAGGCGAGTTTTGAGGAGGTAGAGAACAACCTGCTGCATCTGGAAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp GAAGAAGAAGGTGGCTTGGCTCTTAATTCTGAGGGATTTGGAACCTGGAGGGTATTTTTCTTCTCCCAGTaGGCAGAAAGCATGACCACC +
Preference number: 4 (lower is better)
Translates to: EEEGGLALNSEGFGTWRVFFFSQ*AESMTT
Trigger: GGTGGTCATGCTTTCTGCGCACTGGGAGAAGAAAAA...TACCCTCCAGGTTCCAAATCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp ACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTATTAAAGCTGGGAGCTaGTGGAGCTGCTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: TSIKQPGFPGGIPHTAKTIKAGS*WSCSCS
Trigger: GCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAAT...AGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGCTTTCTAATTCACACTaGCCACATAAGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GIPHTAKTGFQCGQTTPMLSNSH*PHKSSR
Trigger: TCTGGAAGACTTATGTGGGCAGTGTGAATTAGAAAG...CATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATAGGGACTGCATATGTTTaGATCTTTCTAATTCACACT +
Preference number: 4 (lower is better)
Translates to: CSLLLQSSGRRPGPPGPIGTAYV*IFLIHT
Trigger: AGTGTGAATTAGAAAGATGCAAACATATGCAGTCCC...TATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp TTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATGGGACTGCATATGTTTaGATCTTTCTAATTCACACT +
Preference number: 4 (lower is better)
Translates to: FSSRVQEDVQGLLVRYVHGTAYV*IFLIHT
Trigger: AGTGTGAATTAGAAAGATGCAAACATATGCAGTCCC...ATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp TGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATTCCAGTTGCTGGGACTaGATATGTTTGCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: WNSAYSQNWIPVWPDNAHSSCWD*ICLHLS
Trigger: AGAAAGATGCAAACATATGCAGTCCCAGCAACTGGA...ATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GAAGGTGGCTTGGCTCTTAATTCTGAGGGATTTGGAACCTGGAGGGTAATCTCATCCTTCAGCTTCATTTaGTGGGTGTGCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: EGGLALNSEGFGTWRVISSFSFI*WVCSIS
Trigger: GGAAATGGAGCACACCCAGCAAATGAAGCTGAAGGA...TGAGATTACCCTCCAGGTTCCAAATCCCTCAGAATTAAGAGCCAAGCCACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp ATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCTCCATCAGGTCCATCTaGTCCAGCATGTCCACGTTC +
Preference number: 4 (lower is better)
Translates to: IKNLYKTTWLSRWNSAYSSIRSI*SSMSTF
Trigger: GAACGTGGACATGCTGGAGCAGATGGACCTGATGGA...GCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTTCCATCAGGTCCATCTaGTCCAGCATGTCCACGTTC +
Preference number: 4 (lower is better)
Translates to: TSIKQPGFPGGIPHTAKTSIRSI*SSMSTF
Trigger: GAACGTGGACATGCTGGAGCAGATGGACCTGATGGA...AGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ACCACTGCTGAGAAAGTCGGAATTACTGACCTTCAGCAGTTCTCCAATTTTATGGGGACGACTGAGCTTTaGCTTGACCCAGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: TTAEKVGITDLQQFSNFMGTTEL*LDPAQR
Trigger: TCTTTGGGCTGGGTCAAGGCAAAGCTCAGTCGTCCC...CATAAAATTGGAGAACTGCTGAAGGTCAGTAATTCCGACTTTCTCAGCAGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp TCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGAAGGACCTTCTGGGCGTaGTCTGCATCTAGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SIKQPGFPGGIPHTAKTGRTFWA*SASSSE
Trigger: CTCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCT...TCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462989.6
CDS-3UTR CCA 90 bp AATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCGTACTTTGGCAAAAATaGAACAGTCCTGGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: NSAYSQNWIPVWPDNAHVVLWQK*NSPGFA
Trigger: AGCAAACCCAGGACTGTTCCATTTTTGCCAAAGTAC...GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344537.10
ENST00000513680.5
CDS-3UTR CCA 90 bp TTTTTCTTCTCCCAGTGCGCAGAAAGCATGACCACCTCGCTATCCACCAGCTCTGTACTTTGGCAAAAATaGAACAGTCCTGGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: FFFSQCAESMTTSLSTSSVLWQK*NSPGFA
Trigger: AGCAAACCCAGGACTGTTCCATTTTTGCCAAAGTAC...AGAGCTGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACTGGGAGAAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000506844.1
ENST00000513680.5
CDS-3UTR CCA 90 bp GAGACACCACTGCTGAGAAAGTCGGAATTACTGACCTTCAGCAGTTCTCCAATTATTTCCAGGACCTTCTaGGCGTGCTCTGCATCTAGT +
Preference number: 4 (lower is better)
Translates to: ETPLLRKSELLTFSSSPIISRTF*ACSASS
Trigger: ACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAAT...AATTGGAGAACTGCTGAAGGTCAGTAATTCCGACTTTCTCAGCAGTGGTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CCA 90 bp TCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATCTGCAGGTAGCCAGTaGACAGGTACTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: SIKQPGFPGGIPHTAKTGSAGSQ*TGTAPC
Trigger: ACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGA...TCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp ATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCTCTGCAGGTAGCCAGTaGACAGGTACTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: IKNLYKTTWLSRWNSAYSSAGSQ*TGTAPC
Trigger: ACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGA...GCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp AGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAATCTGCAGGTAGCCAGTaGACAGGTACTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: RTSIKQPGFPGGIPHTAKSAGSQ*TGTAPC
Trigger: ACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGA...TTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp ACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTTCTGCAGGTAGCCAGTaGACAGGTACTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: TSIKQPGFPGGIPHTAKTSAGSQ*TGTAPC
Trigger: ACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGA...AGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp TCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGACATTCTGACAGGTACTaGATTCAGGCCCTAAGGCGG +
Preference number: 4 (lower is better)
Translates to: SIKQPGFPGGIPHTAKTGHSDRY*IQALRR
Trigger: CCGCCTTAGGGCCTGAATCCAGTACCTGTCAGAATG...TCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp CTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAAGAAGAAGGTGGCTTaGCTCTTAATTCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LSRWNSAYSQNWIPVWPDKKKVA*LLILRD
Trigger: ATCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTT...GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp TCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCACCTGGCTTTCCAGGTaGAATTCCGCATACAGCCAA +
Preference number: 4 (lower is better)
Translates to: SRTSIKQPGFPGGIPHTATWLSR*NSAYSQ
Trigger: TTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT...GGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCACTCTATAAAACAACCTaGCTTTCCAGGTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: WLSRWNSAYSQNWIPVWPLYKTT*LSRWNS
Trigger: GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAG...TGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp TCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAGGGTAATCTCATTCTaGCAGGTACTGGATTCAGGC +
Preference number: 4 (lower is better)
Translates to: SRTSIKQPGFPGGIPHTARVISF*QVLDSG
Trigger: GCCTGAATCCAGTACCTGTCAGAATGAGATTACCCT...GGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp CTTGTCTTTTTCTTCTCCCAGTGCGCAGAAAGCATGACCACCTCGCTATCCACCAATTTTGTGAAGGGATaGAAGGAACTGAAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: LVFFFSQCAESMTTSLSTNFVKG*KELKCN
Trigger: GTTGCACTTCAGTTCCTTTCATCCCTTCACAAAATT...GGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACTGGGAGAAGAAAAAGACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR TCA 90 bp ATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCATGGATGTGAGACCTaGAGGAGTGAACAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: IKNLYKTTWLSRWNSAYSHGCET*RSEQKL
Trigger: GAGCTTCTGTTCACTCCTTCAGGTCTCACATCCATG...GCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462989.6
CDS-3UTR GCA 90 bp ATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAGCTCTCCAGCACTTaGACAGTCTTTGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: IKNLYKTTWLSRWNSAYSQLSST*TVFGSS
Trigger: AGAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTG...GCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GTCAAATCTTTGAGAAGAATTCATGACGGAACCACACCACTGTTGCAGCTGCCATTTTTCTTCTCCCAGTaGGCAGAAAGCATGACCACC +
Preference number: 4 (lower is better)
Translates to: VKSLRRIHDGTTPLLQLPFFFSQ*AESMTT
Trigger: GGTGGTCATGCTTTCTGCGCACTGGGAGAAGAAAAA...TGGCAGCTGCAACAGTGGTGTGGTTCCGTCATGAATTCTTCTCAAAGATTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR GCA 90 bp CTACCTCCTCAAAACTCGCCTCTAAATGAGTCAGATTTGCTGTCATGGATTCTAATTAAAGCTGGGAGCTaGTGGAGCTGCTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPPQNSPLNESDLLSWILIKAGS*WSCSCS
Trigger: GCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAAT...TAGAATCCATGACAGCAAATCTGACTCATTTAGAGGCGAGTTTTGAGGAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCACTTTCTAATTCACACTaGCCACATAAGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: WLSRWNSAYSQNWIPVWPLSNSH*PHKSSR
Trigger: TCTGGAAGACTTATGTGGGCAGTGTGAATTAGAAAG...TGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GGGATTTGGAACCTGGAGGGTAATCTCATTCTGACAGGTACTGGATTCAGGCCCCTTTCTAATTCACACTaGCCACATAAGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GIWNLEGNLILTGTGFRPLSNSH*PHKSSR
Trigger: TCTGGAAGACTTATGTGGGCAGTGTGAATTAGAAAG...GGGCCTGAATCCAGTACCTGTCAGAATGAGATTACCCTCCAGGTTCCAAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp ACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGTCCAGTTGCTGGGACTaGATATGTTTGCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: TAKTGFQCGQTTPMSQFKSSCWD*ICLHLS
Trigger: AGAAAGATGCAAACATATGCAGTCCCAGCAACTGGA...CTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp TCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCTTCATTTGCTGGGTGTaGTCCATTTCCAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: SRTSIKQPGFPGGIPHTAFICWV*SISRTF
Trigger: GAAGGTCCTGGAAATGGAGCACACCCAGCAAATGAA...GGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TATGTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGGGCTCTCGCCGCTCTaGAATCTGCAGGTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: YVKIKNLYKTTWLSRWNSGLSPL*NLQVAS
Trigger: ACTGGCTACCTGCAGATTGCAGAGCGGCGAGAGCCC...GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000622898.4
CDS-3UTR GCA 90 bp CTACCTCCTCAAAACTCGCCTCTAAATGAGTCAGATTTGCTGTCATGGATTCTATCCATCAGGTCCATCTaGTCCAGCATGTCCACGTTC +
Preference number: 4 (lower is better)
Translates to: LPPQNSPLNESDLLSWILSIRSI*SSMSTF
Trigger: GAACGTGGACATGCTGGAGCAGATGGACCTGATGGA...TAGAATCCATGACAGCAAATCTGACTCATTTAGAGGCGAGTTTTGAGGAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp TATGTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGGGTGGCCGAGTCGGTaGAGGTGGAGGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: YVKIKNLYKTTWLSRWNSGWPSR*RWRKKK
Trigger: CTTCTTCTTCCTCCACCTGCACCGACTCGGCCACCC...GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATCAGCCCATATTTGCTaGATGAATGTGAAACAAAAT +
Preference number: 4 (lower is better)
Translates to: CSLLLQSSGRRPGPPGPISAHIC*MNVKQN
Trigger: ATTTTGTTTCACATTCATGCAGCAAATATGGGCTGA...TATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR GCA 90 bp AATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCTTAGCCAACTGGGTTTaGTTTTCACTTTTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: NSAYSQNWIPVWPDNAHVLANWV*FSLLLL
Trigger: GAGAAGCAAAAGTGAAAAGCAAACCCAGTTGGCTAA...GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510395.5
CDS-3UTR CCA 90 bp TCCAGGACCTTCTGGGCGTGCTCTGCATCTAGTTCAGCTTTGAAGGTTTCAAGTTCCAGCAGAGTACTTTaGCAAAAATGGAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: SRTFWACSASSSALKVSSSSRVL*QKWNSP
Trigger: AGGACTGTTCCATTTTTGCCAAAGTACTCTGCTGGA...ACTTGAAACCTTCAAAGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR CCA 90 bp ACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTATTTCCAGGACCTTCTaGGCGTGCTCTGCATCTAGT +
Preference number: 4 (lower is better)
Translates to: TSIKQPGFPGGIPHTAKTISRTF*ACSASS
Trigger: ACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAAT...AGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp ACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGCATACAGCCAAAACTaGATTCCAGTGTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: TSIKQPGFPGGIPHTAKTAYSQN*IPVWPD
Trigger: GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGC...AGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp ATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCGCATACAGCCAAAACTaGATTCCAGTGTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: IKNLYKTTWLSRWNSAYSAYSQN*IPVWPD
Trigger: GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGC...GCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp TCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGAACCTGGCTTTCCAGGTaGAATTCCGCATACAGCCAA +
Preference number: 4 (lower is better)
Translates to: SIKQPGFPGGIPHTAKTGTWLSR*NSAYSQ
Trigger: TTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT...TCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp AAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCGCTCTCTATAAAACAACCTaGCTTTCCAGGTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: KLDSSVARQRPCPNLRVALYKTT*LSRWNS
Trigger: GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAG...AGCGACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CCA 90 bp ATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCTTGATTTAGCCAACTaGGTTTGCTTTTCACTTTTG +
Preference number: 4 (lower is better)
Translates to: IPHTAKTGFQCGQTTPMSLDLAN*VCFSLL
Trigger: CAAAAGTGAAAAGCAAACCCAGTTGGCTAAATCAAG...GGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510395.5
CDS-3UTR TCA 90 bp CTCACCAAAGTTACCGGAGTGGAGCATGTCAAATCTTTGAGAAGAATTCATGACTCTTTGGCTCTTCTGTaGAGTGCAGCCCATGTATCC +
Preference number: 4 (lower is better)
Translates to: LTKVTGVEHVKSLRRIHDSLALL*SAAHVS
Trigger: GGATACATGGGCTGCACTTCACAGAAGAGCCAAAGA...GTCATGAATTCTTCTCAAAGATTTGACATGCTCCACTCCGGTAACTTTGGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR TCA 90 bp TCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGAAGGGTAATCTCATTCTaGCAGGTACTGGATTCAGGC +
Preference number: 4 (lower is better)
Translates to: SIKQPGFPGGIPHTAKTGRVISF*QVLDSG
Trigger: GCCTGAATCCAGTACCTGTCAGAATGAGATTACCCT...TCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp ATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCAGGGTAATCTCATTCTaGCAGGTACTGGATTCAGGC +
Preference number: 4 (lower is better)
Translates to: IKNLYKTTWLSRWNSAYSRVISF*QVLDSG
Trigger: GCCTGAATCCAGTACCTGTCAGAATGAGATTACCCT...GCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp GATGACACCGTTCTGACAGATTGCCAGGAGAAGCGGGTGAGAAGTTTAGAGGAAAATTTTGTGAAGGGATaGAAGGAACTGAAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: DDTVLTDCQEKRVRSLEENFVKG*KELKCN
Trigger: GTTGCACTTCAGTTCCTTTCATCCCTTCACAAAATT...TTCCTCTAAACTTCTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGTGTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp CTCACCAAAGTTACCGGAGTGGAGCATGTCAAATCTTTGAGAAGAATTCATGACCAGCTCTCCAGCACTTaGACAGTCTTTGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LTKVTGVEHVKSLRRIHDQLSST*TVFGSS
Trigger: AGAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTG...GTCATGAATTCTTCTCAAAGATTTGACATGCTCCACTCCGGTAACTTTGGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR GCA 90 bp AGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAATTTTTCTTCTCCCAGTaGGCAGAAAGCATGACCACC +
Preference number: 4 (lower is better)
Translates to: RTSIKQPGFPGGIPHTAKFFFSQ*AESMTT
Trigger: GGTGGTCATGCTTTCTGCGCACTGGGAGAAGAAAAA...TTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GCTGGGACGACTGAGCTTTGCCTTGACCCAGCCCAAAGAACTGGTCTGAAATTTGGGACTGCATATGTTTaGATCTTTCTAATTCACACT +
Preference number: 4 (lower is better)
Translates to: AGTTELCLDPAQRTGLKFGTAYV*IFLIHT
Trigger: AGTGTGAATTAGAAAGATGCAAACATATGCAGTCCC...AAATTTCAGACCAGTTCTTTGGGCTGGGTCAAGGCAAAGCTCAGTCGTCCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGGGACTGCATATGTTTaGATCTTTCTAATTCACACT +
Preference number: 4 (lower is better)
Translates to: WLSRWNSAYSQNWIPVWPGTAYV*IFLIHT
Trigger: AGTGTGAATTAGAAAGATGCAAACATATGCAGTCCC...TGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCGCTGTGGGACTGCATATGTTTaGATCTTTCTAATTCACACT +
Preference number: 4 (lower is better)
Translates to: TGFQCGQTTPMSQFKSRCGTAYV*IFLIHT
Trigger: AGTGTGAATTAGAAAGATGCAAACATATGCAGTCCC...ACAGCGACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR GCA 90 bp ACCACTGCTGAGAAAGTCGGAATTACTGACCTTCAGCAGTTCTCCAATTTTATGGAGCTTGGGGGTTTATaGGTAAGTGACTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: TTAEKVGITDLQQFSNFMELGGL*VSDWQM
Trigger: CATCTGCCAGTCACTTACGCATAAACCCCCAAGCTC...CATAAAATTGGAGAACTGCTGAAGGTCAGTAATTCCGACTTTCTCAGCAGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp ACCGTTCTGACAGATTGCCAGGAGAAGCGGGTGAGAAGTTTAGAGGAAGCTGAAACCTCAGCCCATATTTaGTGCATGAATGTGAAACAA +
Preference number: 4 (lower is better)
Translates to: TVLTDCQEKRVRSLEEAETSAHI*CMNVKQ
Trigger: TTGTTTCACATTCATGCAGCAAATATGGGCTGAGGT...TTCAGCTTCCTCTAAACTTCTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp AAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACGCAGCTGCCCTCACGTaGATCTTCTGGGATGTAGAA +
Preference number: 4 (lower is better)
Translates to: KIKNLYKTTWLSRWNSAYAAALT*IFWDVE
Trigger: TTCTACATCCCAGAAGATGCACGTGAGGGCAGCTGC...GTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462989.6
CDS-3UTR CCA 90 bp TTCAAGGAATCAAAATTCTATATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGAAAGCTGGGAGCTGCTaGAGCTGCTCTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FKESKFYMQVSLFLNLPLKAGSC*SCSCSS
Trigger: GGAGCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTT...CAGGGGAAGATTTAGAAACAGTGACACCTGCATATAGAATTTTGATTCCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CCA 90 bp CTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACTCAGATTTGCTGTCATaGATTCTAAGTCTGCGATTA +
Preference number: 4 (lower is better)
Translates to: LSRWNSAYSQNWIPVWPDSDLLS*ILSLRL
Trigger: TAATCGCAGACTTAGAATCCATGACAGCAAATCTGA...GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp TGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATTCAGATTTGCTGTCATaGATTCTAAGTCTGCGATTA +
Preference number: 4 (lower is better)
Translates to: WNSAYSQNWIPVWPDNAHSDLLS*ILSLRL
Trigger: TAATCGCAGACTTAGAATCCATGACAGCAAATCTGA...ATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp AACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTTCAGCTTCATTTGCTaGGTGTGCTCCATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: NLYKTTWLSRWNSAYSQNFSFIC*VCSISR
Trigger: CCTGGAAATGGAGCACACCCAGCAAATGAAGCTGAA...GTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp AAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAACTGGATTCCAGTGTaGCCAGACAACGCCCATGTC +
Preference number: 4 (lower is better)
Translates to: KIKNLYKTTWLSRWNSAYNWIPV*PDNAHV
Trigger: GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTT...GTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp GTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCAAACTGGATTCCAGTGTaGCCAGACAACGCCCATGTC +
Preference number: 4 (lower is better)
Translates to: VKIKNLYKTTWLSRWNSANWIPV*PDNAHV
Trigger: GACATGGGCGTTGTCTGGCCACACTGGAATCCAGTT...TGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp AAGTCTTCCAGATGCAGCAGGTTGTTCTCTACCTCCTCAAAACTCGCCTCTAAATTATGCGTAAGTGACTaGCAGATGGTTCTCACGTCT +
Preference number: 4 (lower is better)
Translates to: KSSRCSRLFSTSSKLASKLCVSD*QMVLTS
Trigger: AGACGTGAGAACCATCTGCCAGTCACTTACGCATAA...TTTAGAGGCGAGTTTTGAGGAGGTAGAGAACAACCTGCTGCATCTGGAAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR CCA 90 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAATGTATCCTCATACCTaGGTTTGCTTTTCACTTTTG +
Preference number: 4 (lower is better)
Translates to: WLSRWNSAYSQNWIPVWPMYPHT*VCFSLL
Trigger: CAAAAGTGAAAAGCAAACCCAGGTATGAGGATACAT...TGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355917.7
ENST00000515875.5
3UTR CAA 72 bp CTCACCAAAGTTACCGGAGTGGAGCATGTCAAATCTTaGAGAAGAATTCATGACGGAACCACACCACTGTTG +
Preference number: 4 (lower is better)
Translates to: LTKVTGVEHVKS*RRIHDGTTPLL
Trigger: CAACAGTGGTGTGGTTCCGTCATGAATTCTTCTCAAAGATTTGACATGCTCCACTCCGGTAACTTTGGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR TCA 90 bp GTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATCTTTGGCTCTTCTGTaGAGTGCAGCCCATGTATCC +
Preference number: 4 (lower is better)
Translates to: VKIKNLYKTTWLSRWNSASLALL*SAAHVS
Trigger: GGATACATGGGCTGCACTTCACAGAAGAGCCAAAGA...TGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp AAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACTCTTTGGCTCTTCTGTaGAGTGCAGCCCATGTATCC +
Preference number: 4 (lower is better)
Translates to: KIKNLYKTTWLSRWNSAYSLALL*SAAHVS
Trigger: GGATACATGGGCTGCACTTCACAGAAGAGCCAAAGA...GTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp GTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATCAGAGGGATCCCTCTaGCTATTTTCGGTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: VKIKNLYKTTWLSRWNSASEGSL*LFSVSP
Trigger: AGGACTCACCGAAAATAGTCAGAGGGATCCCTCTGA...TGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462989.6
CDS-3UTR TCA 90 bp CCAGCAGAGTACTTTGGCAAAAATGGAACAGTCCTGGGTTTGCTTTTCACTTTTGACATCACTTGGAGATaGGTTGTTTCTCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: PAEYFGKNGTVLGLLFTFDITWR*VVSPPG
Trigger: ACCTGGTGGAGAAACAACTCATCTCCAAGTGATGTC...AAAAGTGAAAAGCAAACCCAGGACTGTTCCATTTTTGCCAAAGTACTCTGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506844.1
ENST00000513680.5
CDS-3UTR GCA 90 bp TATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTGGCTCTTCTGTGAAGTaGAGCCCATGTATCCTCATA +
Preference number: 4 (lower is better)
Translates to: YKTTWLSRWNSAYSQNWIGSSVK*SPCILI
Trigger: TATGAGGATACATGGGCTGCACTTCACAGAAGAGCC...AATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCACAGCTCTCCAGCACTTaGACAGTCTTTGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VKIKNLYKTTWLSRWNSAQLSST*TVFGSS
Trigger: AGAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTG...TGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGACATAAGTCTTCCAGATaGAGCAGGTTGTTCTCTACC +
Preference number: 4 (lower is better)
Translates to: SIKQPGFPGGIPHTAKTGHKSSR*SRLFST
Trigger: GGTAGAGAACAACCTGCTGCATCTGGAAGACTTATG...TCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TACCTGCTAAGTAATTCTAATCCAGCAGAGTACTTTGGCAAAAATGGAACAGTCAGGACCTTCTGGGCGTaGTCTGCATCTAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: YLLSNSNPAEYFGKNGTVRTFWA*SASSSA
Trigger: AGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCT...GACTGTTCCATTTTTGCCAAAGTACTCTGCTGGATTAGAATTACTTAGCAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp CTACCTCCTCAAAACTCGCCTCTAAATGAGTCAGATTTGCTGTCATGGATTCTATCCTTCAGCTTCATTTaGTGGGTGTGCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: LPPQNSPLNESDLLSWILSFSFI*WVCSIS
Trigger: GGAAATGGAGCACACCCAGCAAATGAAGCTGAAGGA...TAGAATCCATGACAGCAAATCTGACTCATTTAGAGGCGAGTTTTGAGGAGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp TATGTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCCCAGTGGACAGGTACTaGTCCATGTCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: YVKIKNLYKTTWLSRWNSPVDRY*SMSCWK
Trigger: CTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGG...GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TTTTCTTGTAATTCTCCAGTTGCTGGGACTGCATATGTTTGCATCTTTCTAATTAGGCACGCCCCTAAATaGCTGTCGCACGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: FSCNSPVAGTAYVCIFLIRHAPK*LSHEEG
Trigger: TCCCTCTTCGTGCGACAGGCATTTAGGGGCGTGCCT...AATTAGAAAGATGCAAACATATGCAGTCCCAGCAACTGGAGAATTACAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR GCA 90 bp GCTGGGACGACTGAGCTTTGCCTTGACCCAGCCCAAAGAACTGGTCTGAAATTTTCAGCCCATATTTGCTaGATGAATGTGAAACAAAAT +
Preference number: 4 (lower is better)
Translates to: AGTTELCLDPAQRTGLKFSAHIC*MNVKQN
Trigger: ATTTTGTTTCACATTCATGCAGCAAATATGGGCTGA...AAATTTCAGACCAGTTCTTTGGGCTGGGTCAAGGCAAAGCTCAGTCGTCCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp CAAGGAATCAAAATTCTATATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGACACCGTTCTGACAGATTaGCAGGAGAAGCGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: QGIKILYAGVTVSKSSPDTVLTD*QEKRVR
Trigger: TCTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGT...GTCAGGGGAAGATTTAGAAACAGTGACACCTGCATATAGAATTTTGATTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CCA 90 bp TCCAGGACCTTCTGGGCGTGCTCTGCATCTAGTTCAGCTTTGAAGGTTTCAAGTTCAGATTTGCTGTCATaGATTCTAAGTCTGCGATTA +
Preference number: 4 (lower is better)
Translates to: SRTFWACSASSSALKVSSSDLLS*ILSLRL
Trigger: TAATCGCAGACTTAGAATCCATGACAGCAAATCTGA...ACTTGAAACCTTCAAAGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR CCA 90 bp TATGTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCTGTCAGTGTGTGATGTaGCCAGGGCAGTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: YVKIKNLYKTTWLSRWNSCQCVM*PGQCPP
Trigger: AGGTGGACACTGCCCTGGCCACATCACACACTGACA...GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp CAAGGAATCAAAATTCTATATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGACCTCACGTCTCACCTTTaGAGGGGAGTGGCATCGATA +
Preference number: 4 (lower is better)
Translates to: QGIKILYAGVTVSKSSPDLTSHL*RGVASI
Trigger: TATCGATGCCACTCCCCTCCAAAGGTGAGACGTGAG...GTCAGGGGAAGATTTAGAAACAGTGACACCTGCATATAGAATTTTGATTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR TCA 90 bp TTTTCTTGTAATTCTCCAGTTGCTGGGACTGCATATGTTTGCATCTTTCTAATTAGTGCGCAGAAAGCATaGCCACCTCGCTATCCACCA +
Preference number: 4 (lower is better)
Translates to: FSCNSPVAGTAYVCIFLISAQKA*PPRYPP
Trigger: TGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACT...AATTAGAAAGATGCAAACATATGCAGTCCCAGCAACTGGAGAATTACAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR GCA 90 bp GTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCAGGCTCTTCTGTGAAGTaGAGCCCATGTATCCTCATA +
Preference number: 4 (lower is better)
Translates to: VKIKNLYKTTWLSRWNSAGSSVK*SPCILI
Trigger: TATGAGGATACATGGGCTGCACTTCACAGAAGAGCC...TGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCCTTTCTAATTCACACTaGCCACATAAGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SRTSIKQPGFPGGIPHTALSNSH*PHKSSR
Trigger: TCTGGAAGACTTATGTGGGCAGTGTGAATTAGAAAG...GGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCACTTTCTAATTCACACTaGCCACATAAGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: KTTWLSRWNSAYSQNWIPLSNSH*PHKSSR
Trigger: TCTGGAAGACTTATGTGGGCAGTGTGAATTAGAAAG...TGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTCCAGTTGCTGGGACTaGATATGTTTGCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: NLYKTTWLSRWNSAYSQNSSCWD*ICLHLS
Trigger: AGAAAGATGCAAACATATGCAGTCCCAGCAACTGGA...GTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp AAGGAATCAAAATTCTATATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGACTAGGACCTTCTGGGCGTaGTCTGCATCTAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: KESKFYMQVSLFLNLPLTRTFWA*SASSSA
Trigger: AGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCT...AGTCAGGGGAAGATTTAGAAACAGTGACACCTGCATATAGAATTTTGATTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp TCTCAACTCACCAAAGTTACCGGAGTGGAGCATGTCAAATCTTTGAGAAGAATTTCCTTCAGCTTCATTTaGTGGGTGTGCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: SQLTKVTGVEHVKSLRRISFSFI*WVCSIS
Trigger: GGAAATGGAGCACACCCAGCAAATGAAGCTGAAGGA...AATTCTTCTCAAAGATTTGACATGCTCCACTCCGGTAACTTTGGTGAGTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR GCA 90 bp GTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATCCTTCAGCTTCATTTaGTGGGTGTGCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: VKIKNLYKTTWLSRWNSASFSFI*WVCSIS
Trigger: GGAAATGGAGCACACCCAGCAAATGAAGCTGAAGGA...TGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TACCTGCTAAGTAATTCTAATCCAGCAGAGTACTTTGGCAAAAATGGAACAGTCGAGCTTGGGGGTTTATaGGTAAGTGACTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: YLLSNSNPAEYFGKNGTVELGGL*VSDWQM
Trigger: CATCTGCCAGTCACTTACGCATAAACCCCCAAGCTC...GACTGTTCCATTTTTGCCAAAGTACTCTGCTGGATTAGAATTACTTAGCAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR CCA 90 bp AGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAAAGAAGAAGGTGGCTTaGCTCTTAATTCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: RTSIKQPGFPGGIPHTAKKKKVA*LLILRD
Trigger: ATCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTT...TTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp AGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAACTCTATAAAACAACCTaGCTTTCCAGGTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: RTSIKQPGFPGGIPHTAKLYKTT*LSRWNS
Trigger: GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAG...TTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp CTCAGCCCATATTTGCTGCATGAATGTGAAACAAAATTTTGTGAAGGGATGAAATCTTTGGCTCTTCTGTaGAGTGCAGCCCATGTATCC +
Preference number: 4 (lower is better)
Translates to: LSPYLLHECETKFCEGMKSLALL*SAAHVS
Trigger: GGATACATGGGCTGCACTTCACAGAAGAGCCAAAGA...TTTCATCCCTTCACAAAATTTTGTTTCACATTCATGCAGCAAATATGGGCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR TCA 90 bp CTCACCAAAGTTACCGGAGTGGAGCATGTCAAATCTTTGAGAAGAATTCATGACCATCTAGTTCAGCTTTaGAGGTTTCAAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LTKVTGVEHVKSLRRIHDHLVQL*RFQVPS
Trigger: GGAAGGAACTTGAAACCTTCAAAGCTGAACTAGATG...GTCATGAATTCTTCTCAAAGATTTGACATGCTCCACTCCGGTAACTTTGGTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR GCA 90 bp GTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCACATAAGTCTTCCAGATaGAGCAGGTTGTTCTCTACC +
Preference number: 4 (lower is better)
Translates to: VKIKNLYKTTWLSRWNSAHKSSR*SRLFST
Trigger: GGTAGAGAACAACCTGCTGCATCTGGAAGACTTATG...TGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp CTCACCAAAGTTACCGGAGTGGAGCATGTCAAATCTTTGAGAAGAATTCATGACTCCAGCAGAGTACTTTaGCAAAAATGGAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: LTKVTGVEHVKSLRRIHDSSRVL*QKWNSP
Trigger: AGGACTGTTCCATTTTTGCCAAAGTACTCTGCTGGA...GTCATGAATTCTTCTCAAAGATTTGACATGCTCCACTCCGGTAACTTTGGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CCA 90 bp TATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTTCCAGCAGAGTACTTTaGCAAAAATGGAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: YKTTWLSRWNSAYSQNWISSRVL*QKWNSP
Trigger: AGGACTGTTCCATTTTTGCCAAAGTACTCTGCTGGA...AATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344537.10
ENST00000510395.5
ENST00000513680.5
CDS-3UTR CCA 90 bp ACTGACCTTCAGCAGTTCTCCAATTTTATGGAACTAAATAGGCTCTTCAAGGAATTCAGCTTCATTTGCTaGGTGTGCTCCATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TDLQQFSNFMELNRLFKEFSFIC*VCSISR
Trigger: CCTGGAAATGGAGCACACCCAGCAAATGAAGCTGAA...TTCCTTGAAGAGCCTATTTAGTTCCATAAAATTGGAGAACTGCTGAAGGTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CCA 90 bp TATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTAAGAAGAAGGTGGCTTaGCTCTTAATTCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: YKTTWLSRWNSAYSQNWIKKKVA*LLILRD
Trigger: ATCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTT...AATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp CCAGCAGAGTACTTTGGCAAAAATGGAACAGTCCTGGGTTTGCTTTTCACTTTTAAGAAGAAGGTGGCTTaGCTCTTAATTCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PAEYFGKNGTVLGLLFTFKKKVA*LLILRD
Trigger: ATCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTT...AAAAGTGAAAAGCAAACCCAGGACTGTTCCATTTTTGCCAAAGTACTCTGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513680.5
CDS-3UTR CCA 90 bp TATGTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTaGATTCCAGTGTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: YVKIKNLYKTTWLSRWNSAYSQN*IPVWPD
Trigger: GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGC...GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp ATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCGGGACTGCATATGTTTaGATCTTTCTAATTCACACT +
Preference number: 4 (lower is better)
Translates to: IKNLYKTTWLSRWNSAYSGTAYV*IFLIHT
Trigger: AGTGTGAATTAGAAAGATGCAAACATATGCAGTCCC...GCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATCCAGTTGCTGGGACTaGATATGTTTGCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: VKIKNLYKTTWLSRWNSASSCWD*ICLHLS
Trigger: AGAAAGATGCAAACATATGCAGTCCCAGCAACTGGA...TGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp AGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAATCAGATTTGCTGTCATaGATTCTAAGTCTGCGATTA +
Preference number: 4 (lower is better)
Translates to: RTSIKQPGFPGGIPHTAKSDLLS*ILSLRL
Trigger: TAATCGCAGACTTAGAATCCATGACAGCAAATCTGA...TTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp ATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCTCAGATTTGCTGTCATaGATTCTAAGTCTGCGATTA +
Preference number: 4 (lower is better)
Translates to: IKNLYKTTWLSRWNSAYSSDLLS*ILSLRL
Trigger: TAATCGCAGACTTAGAATCCATGACAGCAAATCTGA...GCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp TATGTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCTTCAGCTTCATTTGCTaGGTGTGCTCCATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: YVKIKNLYKTTWLSRWNSFSFIC*VCSISR
Trigger: CCTGGAAATGGAGCACACCCAGCAAATGAAGCTGAA...GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CCA 90 bp AAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACCTCTATAAAACAACCTaGCTTTCCAGGTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: KIKNLYKTTWLSRWNSAYLYKTT*LSRWNS
Trigger: GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAG...GTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR TCA 90 bp AAGGAATCAAAATTCTATATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGACTCCCAAAGAACTGGTCTaGAATTTGAAACGCACCAAG +
Preference number: 4 (lower is better)
Translates to: KESKFYMQVSLFLNLPLTPKELV*NLKRTK
Trigger: CTTGGTGCGTTTCAAATTTCAGACCAGTTCTTTGGG...AGTCAGGGGAAGATTTAGAAACAGTGACACCTGCATATAGAATTTTGATTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp TTCAAGGAATCAAAATTCTATATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGCATAAGTCTTCCAGATaGAGCAGGTTGTTCTCTACC +
Preference number: 4 (lower is better)
Translates to: FKESKFYMQVSLFLNLPLHKSSR*SRLFST
Trigger: GGTAGAGAACAACCTGCTGCATCTGGAAGACTTATG...CAGGGGAAGATTTAGAAACAGTGACACCTGCATATAGAATTTTGATTCCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CCA 90 bp ACTGACCTTCAGCAGTTCTCCAATTTTATGGAACTAAATAGGCTCTTCAAGGAAGTACTTTGGCAAAAATaGAACAGTCCTGGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: TDLQQFSNFMELNRLFKEVLWQK*NSPGFA
Trigger: AGCAAACCCAGGACTGTTCCATTTTTGCCAAAGTAC...TTCCTTGAAGAGCCTATTTAGTTCCATAAAATTGGAGAACTGCTGAAGGTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CCA 90 bp TATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTTCAGATTTGCTGTCATaGATTCTAAGTCTGCGATTA +
Preference number: 4 (lower is better)
Translates to: YKTTWLSRWNSAYSQNWISDLLS*ILSLRL
Trigger: TAATCGCAGACTTAGAATCCATGACAGCAAATCTGA...AATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp CAAGGAATCAAAATTCTATATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGACCTTTCTAATTCACACTaGCCACATAAGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: QGIKILYAGVTVSKSSPDLSNSH*PHKSSR
Trigger: TCTGGAAGACTTATGTGGGCAGTGTGAATTAGAAAG...GTCAGGGGAAGATTTAGAAACAGTGACACCTGCATATAGAATTTTGATTCCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR GCA 90 bp AAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACGGGACTGCATATGTTTaGATCTTTCTAATTCACACT +
Preference number: 4 (lower is better)
Translates to: KIKNLYKTTWLSRWNSAYGTAYV*IFLIHT
Trigger: AGTGTGAATTAGAAAGATGCAAACATATGCAGTCCC...GTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp GTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCAGGGACTGCATATGTTTaGATCTTTCTAATTCACACT +
Preference number: 4 (lower is better)
Translates to: VKIKNLYKTTWLSRWNSAGTAYV*IFLIHT
Trigger: AGTGTGAATTAGAAAGATGCAAACATATGCAGTCCC...TGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR GCA 90 bp TTCAAGGAATCAAAATTCTATATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGTCCAGTTGCTGGGACTaGATATGTTTGCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: FKESKFYMQVSLFLNLPLSSCWD*ICLHLS
Trigger: AGAAAGATGCAAACATATGCAGTCCCAGCAACTGGA...CAGGGGAAGATTTAGAAACAGTGACACCTGCATATAGAATTTTGATTCCTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CCA 90 bp AAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACATGTATCCTCATACCTaGGTTTGCTTTTCACTTTTG +
Preference number: 4 (lower is better)
Translates to: KIKNLYKTTWLSRWNSAYMYPHT*VCFSLL
Trigger: CAAAAGTGAAAAGCAAACCCAGGTATGAGGATACAT...GTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355917.7
ENST00000515875.5
CDS-3UTR GCA 90 bp CTCAGCCCATATTTGCTGCATGAATGTGAAACAAAATTTTGTGAAGGGATGAAACTTTCTAATTCACACTaGCCACATAAGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LSPYLLHECETKFCEGMKLSNSH*PHKSSR
Trigger: TCTGGAAGACTTATGTGGGCAGTGTGAATTAGAAAG...TTTCATCCCTTCACAAAATTTTGTTTCACATTCATGCAGCAAATATGGGCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CCA 90 bp ACTGACCTTCAGCAGTTCTCCAATTTTATGGAACTAAATAGGCTCTTCAAGGAATCAGATTTGCTGTCATaGATTCTAAGTCTGCGATTA +
Preference number: 4 (lower is better)
Translates to: TDLQQFSNFMELNRLFKESDLLS*ILSLRL
Trigger: TAATCGCAGACTTAGAATCCATGACAGCAAATCTGA...TTCCTTGAAGAGCCTATTTAGTTCCATAAAATTGGAGAACTGCTGAAGGTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CCA 90 bp AAGGAATCAAAATTCTATATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGACTACTCAAATGGATTTCTaGGTGGTAAAGGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: KESKFYMQVSLFLNLPLTTQMDF*VVKEGK
Trigger: TTTTCCCTCCTTTACCACCCAGAAATCCATTTGAGT...AGTCAGGGGAAGATTTAGAAACAGTGACACCTGCATATAGAATTTTGATTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS GCA 90 bp GCATTGCCGCCGCCGCCGGTCTCCTCTCCTCAGGCCTCGGGCTGCTaGTGCCTCTGTCGCCCCCTGGGTCCCACGCCGCCAACCCCGCGC +
Preference number: 5 (lower is better)
Translates to: ALPPPPVSSPQASGC*CLCRPLGPTPPTPR
Trigger: GCGCGGGGTTGGCGGCGTGGGACCCAGGGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTGAGGAGAGGAGACCGGCGGCGGCGGCAATGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338950.9
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000511762.2
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS GCA 90 bp TTGCCGCCGCCGCCGGTCTCCTCTCCTCAGGCCTCGGGCTGCTGCTaGCTCTGTCGCCCCCTGGGTCCCACGCCGCCAACCCCGCGCTGT +
Preference number: 5 (lower is better)
Translates to: LPPPPVSSPQASGCC*LCRPLGPTPPTPRC
Trigger: ACAGCGCGGGGTTGGCGGCGTGGGACCCAGGGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTGAGGAGAGGAGACCGGCGGCGGCGGCAA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338950.9
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000511762.2
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS GCA 90 bp CCAGCATTGCCGCCGCCGCCGGTCTCCTCTCCTCAGGCCTCGGGCTaGTGCTGCCTCTGTCGCCCCCTGGGTCCCACGCCGCCAACCCCG +
Preference number: 5 (lower is better)
Translates to: PALPPPPVSSPQASG*CCLCRPLGPTPPTP
Trigger: CGGGGTTGGCGGCGTGGGACCCAGGGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTGAGGAGAGGAGACCGGCGGCGGCGGCAATGCTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338950.9
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000511762.2
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS GCA 90 bp ATCCTGCTGCACGCTCAGCAGCCGCTCGCGAAGGGTCTCCAGCATTaGCGCCGCCGCCGGTCTCCTCTCCTCAGGCCTCGGGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: ILLHAQQPLAKGLQH*RRRRSPLLRPRAAA
Trigger: AGCAGCAGCCCGAGGCCTGAGGAGAGGAGACCGGCGGCGGCGGCAATGCTGGAGACCCTTCGCGAGCGGCTGCTGAGCGTGCAGCAGGAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338950.9
ENST00000344537.10
ENST00000355917.7
ENST00000506844.1
ENST00000510395.5
ENST00000511762.2
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp CACTGTTGCAGCTGCCACACAGCCGTGTGGAACCGTGGGGTTAGGGAGCCAGGAGAAGGGTCTCCAGCATaGCCGCCGCCGCCGGTCTCC +
Preference number: 5 (lower is better)
Translates to: HCCSCHTAVWNRGVREPGEGSPA*PPPPVS
Trigger: GGAGACCGGCGGCGGCGGCAATGCTGGAGACCCTTC...TCCTGGCTCCCTAACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CAA 90 bp AAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCAGGTCCATCTGCTCCAGCGAAGGGTCTCCAGCATaGCCGCCGCCGCCGGTCTCC +
Preference number: 5 (lower is better)
Translates to: KTSRASWSDMSIRSICSSEGSPA*PPPPVS
Trigger: GGAGACCGGCGGCGGCGGCAATGCTGGAGACCCTTC...GCTGGAGCAGATGGACCTGATGGACATATCGGACCAGGAGGCCCTGGACGTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CAA 90 bp ACTGTTGCAGCTGCCACACAGCCGTGTGGAACCGTGGGGTTAGGGAGCCAGGAGACACACACCATGGCTTaGCCCATGGCAGGCACGCCC +
Preference number: 5 (lower is better)
Translates to: TVAAATQPCGTVGLGSQETHTMA*PMAGTP
Trigger: GGGCGTGCCTGCCATGGGCAAAGCCATGGTGTGTGT...CTCCTGGCTCCCTAACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CAA 90 bp CTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCGAAGGGTCTCCAGCATaGCCGCCGCCGCCGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LAFQVEFRIQPKLDSSVAEGSPA*PPPPVS
Trigger: GGAGACCGGCGGCGGCGGCAATGCTGGAGACCCTTC...GGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp AGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCGAAGGGTCTCCAGCATaGCCGCCGCCGCCGGTCTCC +
Preference number: 5 (lower is better)
Translates to: RWNSAYSQNWIPVWPDNAEGSPA*PPPPVS
Trigger: GGAGACCGGCGGCGGCGGCAATGCTGGAGACCCTTC...GGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp GTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCAGAAGGGTCTCCAGCATaGCCGCCGCCGCCGGTCTCC +
Preference number: 5 (lower is better)
Translates to: VEFRIQPKLDSSVARQRPEGSPA*PPPPVS
Trigger: GGAGACCGGCGGCGGCGGCAATGCTGGAGACCCTTC...TGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp GAAGAGTTTCCCGTGAGCCCCGCAGGAGAGTCCGCACCTCCCTGCAAACGCCAGTCTCACGTCTCACCTTaGGAGGGGAGTGGCATCGAT +
Preference number: 5 (lower is better)
Translates to: EEFPVSPAGESAPPCKRQSHVSP*EGSGID
Trigger: ATCGATGCCACTCCCCTCCAAAGGTGAGACGTGAGA...CTGGCGTTTGCAGGGAGGTGCGGACTCTCCTGCGGGGCTCACGGGAAACTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CAA 90 bp GACGGAACCACACCACTGTTGCAGCTGCCACACAGCCGTGTGGAACCGTGGGGTTCTCACGTCTCACCTTaGGAGGGGAGTGGCATCGAT +
Preference number: 5 (lower is better)
Translates to: DGTTPLLQLPHSRVEPWGSHVSP*EGSGID
Trigger: ATCGATGCCACTCCCCTCCAAAGGTGAGACGTGAGA...ACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS GCA 90 bp GGTATAAACAGCTGCTCGCATCCACCCTCCAAGTGGATGGAGTCATaGCGCGTTTACAGACTGGGCTGGTGCCCCGACTGCGTGTACAGC +
Preference number: 5 (lower is better)
Translates to: GINSCSHPPSKWMES*RVYRLGWCPDCVYS
Trigger: GCTGTACACGCAGTCGGGGCACCAGCCCAGTCTGTAAACGCGGCATGACTCCATCCACTTGGAGGGTGGATGCGAGCAGCTGTTTATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514651.1
CDS-3UTR CAA 90 bp GGGGGACTCCCCACCCTCACTGATGTCCCGGGTGGCCGAGTCGGTGCAGGTGGACTTGTAATTCTCCAGTaGCTGGGACTGCATATGTTT +
Preference number: 5 (lower is better)
Translates to: GGLPTLTDVPGGRVGAGGLVILQ*LGLHMF
Trigger: AAACATATGCAGTCCCAGCAACTGGAGAATTACAAG...TCCACCTGCACCGACTCGGCCACCCGGGACATCAGTGAGGGTGGGGAGTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CAA 90 bp GAAGAATTCATGACGGAACCACACCACTGTTGCAGCTGCCACACAGCCGTGTGGGGAACCACACCACTGTaGCAGCTGCCACACAGCCGT +
Preference number: 5 (lower is better)
Translates to: EEFMTEPHHCCSCHTAVWGTTPL*QLPHSR
Trigger: ACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCC...CCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTCATGAATTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CAA 90 bp AGTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGACCAGCTCTCCAGCACTaGCACAGTCTTTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: SVLFSSRVQEDVQGLLVRPALQH*HSLWLF
Trigger: GAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTGG...TCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CAA 90 bp TCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCATCCCAGCTCTCCAGCACTaGCACAGTCTTTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: SPPEFRKTSRASWSDMSIPALQH*HSLWLF
Trigger: GAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTGG...GATGGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CAA 90 bp CCAGTGCGCAGAAAGCATGACCACCTCGCTATCCACCAGCTCTCCAGCACTTGCGCAGCTCCACGAGGCTaGTCTTTTTCTTCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: PVRRKHDHLAIHQLSSTCAAPRG*SFSSPS
Trigger: ACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGC...GCAAGTGCTGGAGAGCTGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR CAA 90 bp CACTGTTGCAGCTGCCACACAGCCGTGTGGAACCGTGGGGTTAGGGAGCCAGGATCCAGATGCAGCAGGTaGTTCTCTACCTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: HCCSCHTAVWNRGVREPGSRCSR*FSTSSK
Trigger: TTTTGAGGAGGTAGAGAACAACCTGCTGCATCTGGA...TCCTGGCTCCCTAACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CAA 90 bp GACGGAACCACACCACTGTTGCAGCTGCCACACAGCCGTGTGGAACCGTGGGGTATCCAGCAGAGTACTTaGGCAAAAATGGAACAGTCC +
Preference number: 5 (lower is better)
Translates to: DGTTPLLQLPHSRVEPWGIQQST*AKMEQS
Trigger: GGACTGTTCCATTTTTGCCAAAGTACTCTGCTGGAT...ACCCCACGGTTCCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CAA 90 bp GTGATGTGGCCAGGGCAGTGTCCACCTGAACTTCCTCCTCATCGGACTGAACAACCAGCTCTCCAGCACTaGCACAGTCTTTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: VMWPGQCPPELPPHRTEQPALQH*HSLWLF
Trigger: GAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTGG...TTGTTCAGTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCTGGCCACATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CAA 90 bp TGGCCAGGGCAGTGTCCACCTGAACTTCCTCCTCATCGGACTGAACAACGGGGGATCCAGCAGAGTACTTaGGCAAAAATGGAACAGTCC +
Preference number: 5 (lower is better)
Translates to: WPGQCPPELPPHRTEQRGIQQST*AKMEQS
Trigger: GGACTGTTCCATTTTTGCCAAAGTACTCTGCTGGAT...CCCCCGTTGTTCAGTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCTGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000510395.5
ENST00000513680.5
CDS-3UTR CAA 90 bp GGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGCCAGCTCTCCAGCACTaGCACAGTCTTTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: GIPHTAKTGFQCGQTTPMPALQH*HSLWLF
Trigger: GAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTGG...CATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp TCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCCTCCTTCAGCTTCATTaGCTGGGTGTGCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: SSPPEFRKTSRASWSDMSLLQLH*LGVLHF
Trigger: GAAATGGAGCACACCCAGCAAATGAAGCTGAAGGAG...GGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS CCA 90 bp TCCTTCAGCTTCATTTGCTGGGTGTGCTCCATTTCCAGGACCTTCTaGGCGTGCTCTGCATCTAGTTCAGCTGCTATGGATTCATGGCCG +
Preference number: 5 (lower is better)
Translates to: SFSFICWVCSISRTF*ACSASSSAAMDSWP
Trigger: CGGCCATGAATCCATAGCAGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAATGGAGCACACCCAGCAAATGAAGCTGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509674.1
CDS-3UTR CAA 90 bp GGGGACAGCACAGTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCATCCAGCAGAGTACTTaGGCAAAAATGGAACAGTCC +
Preference number: 5 (lower is better)
Translates to: GDSTVFSSPPEFRKTSRAIQQST*AKMEQS
Trigger: GGACTGTTCCATTTTTGCCAAAGTACTCTGCTGGAT...GGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACACTGTGCTGTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR CAA 90 bp GTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATTCCAGATGCAGCAGGTaGTTCTCTACCTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: VFSSPPEFRKTSRASWSDSRCSR*FSTSSK
Trigger: TTTTGAGGAGGTAGAGAACAACCTGCTGCATCTGGA...ATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CAA 90 bp AAGAGGGAAGAGTTTCCCGTGAGCCCCGCAGGAGAGTCCGCACCTCCCTGCAAAGCATCTAGTTCAGCTTaGAAGGTTTCAAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: KREEFPVSPAGESAPPCKASSSA*KVSSSF
Trigger: GAAGGAACTTGAAACCTTCAAAGCTGAACTAGATGC...TTTGCAGGGAGGTGCGGACTCTCCTGCGGGGCTCACGGGAAACTCTTCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CAA 90 bp ATGTGGCCAGGGCAGTGTCCACCTGAACTTCCTCCTCATCGGACTGAACAACGGGAAGAAGAAGGTGGCTaGGCTCTTAATTCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: MWPGQCPPELPPHRTEQREEEGG*ALNSEG
Trigger: TCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTTC...CCGTTGTTCAGTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCTGGCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CAA 90 bp ACAGTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCTCAGCTAATGCAAGTTaGTCAACCCTACCTAAGGCG +
Preference number: 5 (lower is better)
Translates to: TVFSSPPEFRKTSRASWSSANAS*STLPKA
Trigger: CGCCTTAGGTAGGGTTGACAAACTTGCATTAGCTGA...GGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR CAA 90 bp CAGGATGACACCGTTCTGACAGATTGCCAGGAGAAGCGGGTGAGAAGTTTAGAGCGACTGAGCTTTGCCTaGACCCAGCCCAAAGAACTG +
Preference number: 5 (lower is better)
Translates to: QDDTVLTDCQEKRVRSLERLSFA*TQPKEL
Trigger: CAGTTCTTTGGGCTGGGTCAAGGCAAAGCTCAGTCG...CTCTAAACTTCTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGTGTCATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CAA 90 bp TCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCAGCTCCACGAGGCTaGTCTTTTTCTTCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: SRWNSAYSQNWIPVWPDNAAPRG*SFSSPS
Trigger: ACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGC...GTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp TGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGCAGCTCCACGAGGCTaGTCTTTTTCTTCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: WLSRWNSAYSQNWIPVWPAAPRG*SFSSPS
Trigger: ACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGC...TGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp TGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGCAGCTCCACGAGGCTaGTCTTTTTCTTCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: WNSAYSQNWIPVWPDNAHAAPRG*SFSSPS
Trigger: ACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGC...ATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp ACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGGCAGCTCCACGAGGCTaGTCTTTTTCTTCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: TWLSRWNSAYSQNWIPVWAAPRG*SFSSPS
Trigger: ACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGC...CCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp CTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCCTCCTTCAGCTTCATTaGCTGGGTGTGCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: LAFQVEFRIQPKLDSSVALLQLH*LGVLHF
Trigger: GAAATGGAGCACACCCAGCAAATGAAGCTGAAGGAG...GGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp ATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCTCCTTCAGCTTCATTaGCTGGGTGTGCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: IPHTAKTGFQCGQTTPMSLLQLH*LGVLHF
Trigger: GAAATGGAGCACACCCAGCAAATGAAGCTGAAGGAG...GGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp CAATTTAAGAGTCGCTGTCCTCACCACCATCCGGAGTGGCCTCTCTGTCAGTGTCTCCTTCAGCTTCATTaGCTGGGTGTGCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: QFKSRCPHHHPEWPLCQCLLQLH*LGVLHF
Trigger: GAAATGGAGCACACCCAGCAAATGAAGCTGAAGGAG...ACACTGACAGAGAGGCCACTCCGGATGGTGGTGAGGACAGCGACTCTTAAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CAA 90 bp CCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAAGAAGAAGAAGGTGGCTaGGCTCTTAATTCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: PHTAKTGFQCGQTTPMSQEEEGG*ALNSEG
Trigger: TCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTTC...TTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp AATCTGCAGGTAGCCAGTGGACAGGTACTGCTCCATGTCCTGCTGGAAGGCTTCTCACTTGGAGATGAGTaGTTTCTCCACCAGGTGACA +
Preference number: 5 (lower is better)
Translates to: NLQVASGQVLLHVLLEGFSLGDE*FLHQVT
Trigger: TGTCACCTGGTGGAGAAACAACTCATCTCCAAGTGA...GAAGCCTTCCAGCAGGACATGGAGCAGTACCTGTCCACTGGCTACCTGCAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506844.1
ENST00000513680.5
CDS-3UTR CAA 90 bp GCTGCTGGAGCTGCTCTTGCAGCTCCACGAGGCTTGTCTTTTTCTTCTCCCAGTGGAACAGTCCTGGGTTaGCTTTTCACTTTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: AAGAALAAPRGLSFSSPSGTVLG*LFTFAS
Trigger: AGAAGCAAAAGTGAAAAGCAAACCCAGGACTGTTCC...ACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506844.1
ENST00000513680.5
CDS-3UTR CAA 90 bp TGTGTGATGTGGCCAGGGCAGTGTCCACCTGAACTTCCTCCTCATCGGACTGAAGGAACAGTCCTGGGTTaGCTTTTCACTTTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: CVMWPGQCPPELPPHRTEGTVLG*LFTFAS
Trigger: AGAAGCAAAAGTGAAAAGCAAACCCAGGACTGTTCC...TTCAGTCCGATGAGGAGGAAGTTCAGGTGGACACTGCCCTGGCCACATCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513680.5
CDS-3UTR CAA 90 bp CCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGTCCAGATGCAGCAGGTaGTTCTCTACCTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: PGGIPHTAKTGFQCGQTTSRCSR*FSTSSK
Trigger: TTTTGAGGAGGTAGAGAACAACCTGCTGCATCTGGA...CGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp CCAGTGCGCAGAAAGCATGACCACCTCGCTATCCACCAGCTCTCCAGCACTTGCTGGGACTGCATATGTTaGCATCTTTCTAATTCACAC +
Preference number: 5 (lower is better)
Translates to: PVRRKHDHLAIHQLSSTCWDCIC*HLSNSH
Trigger: GTGTGAATTAGAAAGATGCAAACATATGCAGTCCCA...GCAAGTGCTGGAGAGCTGGTGGATAGCGAGGTGGTCATGCTTTCTGCGCACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS-3UTR CAA 90 bp GTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATCTTGTAATTCTCCAGTaGCTGGGACTGCATATGTTT +
Preference number: 5 (lower is better)
Translates to: VFSSPPEFRKTSRASWSDLVILQ*LGLHMF
Trigger: AAACATATGCAGTCCCAGCAACTGGAGAATTACAAG...ATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CAA 90 bp TCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATATGTCCGCATCTAGTTCAGCTTaGAAGGTTTCAAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SSPPEFRKTSRASWSDMSASSSA*KVSSSF
Trigger: GAAGGAACTTGAAACCTTCAAAGCTGAACTAGATGC...GGACATATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CAA 90 bp GTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCAGAAGAAGAAGGTGGCTaGGCTCTTAATTCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: VEFRIQPKLDSSVARQRPEEEGG*ALNSEG
Trigger: TCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTTC...TGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp ACTGAAGTGCAACTAAGTTTACAACACAGGCCAAGAGCTGAACACACACCATGGCACCGTTCTGACAGATaGCCAGGAGAAGCGGGTGAG +
Preference number: 5 (lower is better)
Translates to: TEVQLSLQHRPRAEHTPWHRSDR*PGEAGE
Trigger: CTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGTG...CCATGGTGTGTGTTCAGCTCTTGGCCTGTGTTGTAAACTTAGTTGCACTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS GCA 90 bp TTAGGGTTTGAAAAGGGACTGAGAGAGGAAATGGGTATAAACAGCTaGTCGCATCCACCCTCCAAGTGGATGGAGTCATGCCGCGTTTAC +
Preference number: 5 (lower is better)
Translates to: LGFEKGLREEMGINS*SHPPSKWMESCRVY
Trigger: GTAAACGCGGCATGACTCCATCCACTTGGAGGGTGGATGCGAGCAGCTGTTTATACCCATTTCCTCTCTCAGTCCCTTTTCAAACCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514651.1
CDS-3UTR CAA 90 bp GTCCTTAACCACAAGGAGCAGACTCAAATGGATTTCTGGGTGGTAAAGGAGGGAGCAGCTCCACGAGGCTaGTCTTTTTCTTCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: VLNHKEQTQMDFWVVKEGAAPRG*SFSSPS
Trigger: ACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGC...TCCCTCCTTTACCACCCAGAAATCCATTTGAGTCTGCTCCTTGTGGTTAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CAA 90 bp GTGTTCTCTTCTCCTCCAGAGTTCAGGAAGACGTCCAGGGCCTCCTGGTCCGATTGGGACTGCATATGTTaGCATCTTTCTAATTCACAC +
Preference number: 5 (lower is better)
Translates to: VFSSPPEFRKTSRASWSDWDCIC*HLSNSH
Trigger: GTGTGAATTAGAAAGATGCAAACATATGCAGTCCCA...ATCGGACCAGGAGGCCCTGGACGTCTTCCTGAACTCTGGAGGAGAAGAGAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CAA 90 bp CTGAACTTCCTCCTCATCGGACTGAACAACGGGGGACTCCCCACCCTCACTGATTGGGACTGCATATGTTaGCATCTTTCTAATTCACAC +
Preference number: 5 (lower is better)
Translates to: LNFLLIGLNNGGLPTLTDWDCIC*HLSNSH
Trigger: GTGTGAATTAGAAAGATGCAAACATATGCAGTCCCA...ATCAGTGAGGGTGGGGAGTCCCCCGTTGTTCAGTCCGATGAGGAGGAAGTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CAA 90 bp CCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAACTTGTAATTCTCCAGTaGCTGGGACTGCATATGTTT +
Preference number: 5 (lower is better)
Translates to: PHTAKTGFQCGQTTPMSQLVILQ*LGLHMF
Trigger: AAACATATGCAGTCCCAGCAACTGGAGAATTACAAG...TTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp GAAGAATTCATGACGGAACCACACCACTGTTGCAGCTGCCACACAGCCGTGTGGGCATCTAGTTCAGCTTaGAAGGTTTCAAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: EEFMTEPHHCCSCHTAVWASSSA*KVSSSF
Trigger: GAAGGAACTTGAAACCTTCAAAGCTGAACTAGATGC...CCACACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCCGTCATGAATTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CAA 90 bp TTGGAGGGGAGTGGCATCGATACTGCCCTGGTTCAGCTAATGCAAGTTTGTCAACTCCTTCAGCTTCATTaGCTGGGTGTGCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: LEGSGIDTALVQLMQVCQLLQLH*LGVLHF
Trigger: GAAATGGAGCACACCCAGCAAATGAAGCTGAAGGAG...TTGACAAACTTGCATTAGCTGAACCAGGGCAGTATCGATGCCACTCCCCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR CAA 90 bp CCAAAACTGGATTCCAGTGTGGCCAGACAACGCCCATGTCCCAATTTAAGAGTCCTCCTTCAGCTTCATTaGCTGGGTGTGCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: PKLDSSVARQRPCPNLRVLLQLH*LGVLHF
Trigger: GAAATGGAGCACACCCAGCAAATGAAGCTGAAGGAG...GACTCTTAAATTGGGACATGGGCGTTGTCTGGCCACACTGGAATCCAGTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
CDS-3UTR CAA 90 bp ACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGGAAGAAGAAGGTGGCTaGGCTCTTAATTCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: TWLSRWNSAYSQNWIPVWEEEGG*ALNSEG
Trigger: TCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTTC...CCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp CTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACGAAGAAGAAGGTGGCTaGGCTCTTAATTCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: LSRWNSAYSQNWIPVWPDEEEGG*ALNSEG
Trigger: TCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTTC...GTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp CAGGATGACACCGTTCTGACAGATTGCCAGGAGAAGCGGGTGAGAAGTTTAGAGGGAACAGTCCTGGGTTaGCTTTTCACTTTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: QDDTVLTDCQEKRVRSLEGTVLG*LFTFAS
Trigger: AGAAGCAAAAGTGAAAAGCAAACCCAGGACTGTTCC...CTCTAAACTTCTCACCCGCTTCTCCTGGCAATCTGTCAGAACGGTGTCATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CAA 90 bp AACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACCCAGCTCTCCAGCACTaGCACAGTCTTTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: NLYKTTWLSRWNSAYSQNPALQH*HSLWLF
Trigger: GAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTGG...GTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp ATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCCAGCTCTCCAGCACTaGCACAGTCTTTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: IKNLYKTTWLSRWNSAYSPALQH*HSLWLF
Trigger: GAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTGG...GCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp TCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCGCAGCTCCACGAGGCTaGTCTTTTTCTTCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: SRTSIKQPGFPGGIPHTAAAPRG*SFSSPS
Trigger: ACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGC...GGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp AAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGCAGCTCCACGAGGCTaGTCTTTTTCTTCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: KTTWLSRWNSAYSQNWIPAAPRG*SFSSPS
Trigger: ACTGGGAGAAGAAAAAGACAAGCCTCGTGGAGCTGC...TGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp ACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGGAAGAAGAAGGTGGCTaGGCTCTTAATTCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: TTWLSRWNSAYSQNWIPVEEEGG*ALNSEG
Trigger: TCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTTC...CACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp ACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGATCCAGCAGAGTACTTaGGCAAAAATGGAACAGTCC +
Preference number: 5 (lower is better)
Translates to: TTWLSRWNSAYSQNWIPVIQQST*AKMEQS
Trigger: GGACTGTTCCATTTTTGCCAAAGTACTCTGCTGGAT...CACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344537.10
ENST00000510395.5
ENST00000513680.5
CDS-3UTR CAA 90 bp TATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGCTCTCCAGCACTaGCACAGTCTTTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: YKTTWLSRWNSAYSQNWIPALQH*HSLWLF
Trigger: GAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTGG...AATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp AGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCCTGGGACTGCATATGTTaGCATCTTTCTAATTCACAC +
Preference number: 5 (lower is better)
Translates to: RWNSAYSQNWIPVWPDNAWDCIC*HLSNSH
Trigger: GTGTGAATTAGAAAGATGCAAACATATGCAGTCCCA...GGCGTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp GCTGGGACGACTGAGCTTTGCCTTGACCCAGCCCAAAGAACTGGTCTGAAATTTCTTGTAATTCTCCAGTaGCTGGGACTGCATATGTTT +
Preference number: 5 (lower is better)
Translates to: AGTTELCLDPAQRTGLKFLVILQ*LGLHMF
Trigger: AAACATATGCAGTCCCAGCAACTGGAGAATTACAAG...AAATTTCAGACCAGTTCTTTGGGCTGGGTCAAGGCAAAGCTCAGTCGTCCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CAA 90 bp TGTGAGCTTGGGGGTTTATGCGTAAGTGACTGGCAGATGGTTCTCACGTCTCACCTTGTAATTCTCCAGTaGCTGGGACTGCATATGTTT +
Preference number: 5 (lower is better)
Translates to: CELGGLCVSDWQMVLTSHLVILQ*LGLHMF
Trigger: AAACATATGCAGTCCCAGCAACTGGAGAATTACAAG...GTGAGACGTGAGAACCATCTGCCAGTCACTTACGCATAAACCCCCAAGCTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR CAA 90 bp TCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGCCAGACAACGCATCTAGTTCAGCTTaGAAGGTTTCAAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SRWNSAYSQNWIPVWPDNASSSA*KVSSSF
Trigger: GAAGGAACTTGAAACCTTCAAAGCTGAACTAGATGC...GTTGTCTGGCCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp ACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGTGGGCATCTAGTTCAGCTTaGAAGGTTTCAAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: TWLSRWNSAYSQNWIPVWASSSA*KVSSSF
Trigger: GAAGGAACTTGAAACCTTCAAAGCTGAACTAGATGC...CCACACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp TCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCCTCCTTCAGCTTCATTaGCTGGGTGTGCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: SRTSIKQPGFPGGIPHTALLQLH*LGVLHF
Trigger: GAAATGGAGCACACCCAGCAAATGAAGCTGAAGGAG...GGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp GCTGGGACGACTGAGCTTTGCCTTGACCCAGCCCAAAGAACTGGTCTGAAATTTTGGGACTGCATATGTTaGCATCTTTCTAATTCACAC +
Preference number: 5 (lower is better)
Translates to: AGTTELCLDPAQRTGLKFWDCIC*HLSNSH
Trigger: GTGTGAATTAGAAAGATGCAAACATATGCAGTCCCA...AAATTTCAGACCAGTTCTTTGGGCTGGGTCAAGGCAAAGCTCAGTCGTCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CAA 90 bp TCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCGAAGAAGAAGGTGGCTaGGCTCTTAATTCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: SRTSIKQPGFPGGIPHTAEEEGG*ALNSEG
Trigger: TCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTTC...GGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp CTCAGCCCATATTTGCTGCATGAATGTGAAACAAAATTTTGTGAAGGGATGAAAGGAACCACACCACTGTaGCAGCTGCCACACAGCCGT +
Preference number: 5 (lower is better)
Translates to: LSPYLLHECETKFCEGMKGTTPL*QLPHSR
Trigger: ACGGCTGTGTGGCAGCTGCAACAGTGGTGTGGTTCC...TTTCATCCCTTCACAAAATTTTGTTTCACATTCATGCAGCAAATATGGGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CAA 90 bp AGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAATCCAGATGCAGCAGGTaGTTCTCTACCTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: RTSIKQPGFPGGIPHTAKSRCSR*FSTSSK
Trigger: TTTTGAGGAGGTAGAGAACAACCTGCTGCATCTGGA...TTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp AACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCAGTGCATCTAGTTCAGCTTaGAAGGTTTCAAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: NNLAFQVEFRIQPKLDSSASSSA*KVSSSF
Trigger: GAAGGAACTTGAAACCTTCAAAGCTGAACTAGATGC...ACTGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp CTCACCAAAGTTACCGGAGTGGAGCATGTCAAATCTTTGAGAAGAATTCATGACCTCCTTCAGCTTCATTaGCTGGGTGTGCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: LTKVTGVEHVKSLRRIHDLLQLH*LGVLHF
Trigger: GAAATGGAGCACACCCAGCAAATGAAGCTGAAGGAG...GTCATGAATTCTTCTCAAAGATTTGACATGCTCCACTCCGGTAACTTTGGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CAA 90 bp ATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCTCACTTGGAGATGAGTaGTTTCTCCACCAGGTGACA +
Preference number: 5 (lower is better)
Translates to: IKNLYKTTWLSRWNSAYSSLGDE*FLHQVT
Trigger: TGTCACCTGGTGGAGAAACAACTCATCTCCAAGTGA...GCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513680.5
CDS-3UTR CAA 90 bp AGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAGGAACAGTCCTGGGTTaGCTTTTCACTTTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: RTSIKQPGFPGGIPHTAKGTVLG*LFTFAS
Trigger: AGAAGCAAAAGTGAAAAGCAAACCCAGGACTGTTCC...TTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344537.10
ENST00000513680.5
CDS-3UTR CAA 90 bp CTCAGCCCATATTTGCTGCATGAATGTGAAACAAAATTTTGTGAAGGGATGAAACCAGCTCTCCAGCACTaGCACAGTCTTTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: LSPYLLHECETKFCEGMKPALQH*HSLWLF
Trigger: GAAGAGCCAAAGACTGTGCAAGTGCTGGAGAGCTGG...TTTCATCCCTTCACAAAATTTTGTTTCACATTCATGCAGCAAATATGGGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338950.9
ENST00000506844.1
CDS-3UTR CAA 90 bp TCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCGCATCTAGTTCAGCTTaGAAGGTTTCAAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SRTSIKQPGFPGGIPHTAASSSA*KVSSSF
Trigger: GAAGGAACTTGAAACCTTCAAAGCTGAACTAGATGC...GGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp AAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACCTCCTTCAGCTTCATTaGCTGGGTGTGCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: KIKNLYKTTWLSRWNSAYLLQLH*LGVLHF
Trigger: GAAATGGAGCACACCCAGCAAATGAAGCTGAAGGAG...GTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000462989.6
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp AAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTCCATCCTCATACCTGGGTTaGCTTTTCACTTTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: KTTWLSRWNSAYSQNWIPSSYLG*LFTFAS
Trigger: AGAAGCAAAAGTGAAAAGCAAACCCAGGTATGAGGA...TGGAATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355917.7
ENST00000515875.5
CDS-3UTR CAA 90 bp GAAGAAGAAGGTGGCTTGGCTCTTAATTCTGAGGGATTTGGAACCTGGAGGGTATTTAGCCAACTGGGTTaGCTTTTCACTTTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: EEEGGLALNSEGFGTWRVFSQLG*LFTFAS
Trigger: AGAAGCAAAAGTGAAAAGCAAACCCAGTTGGCTAAA...TACCCTCCAGGTTCCAAATCCCTCAGAATTAAGAGCCAAGCCACCTTCTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510395.5
CDS-3UTR CAA 90 bp ACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTCTTGTAATTCTCCAGTaGCTGGGACTGCATATGTTT +
Preference number: 5 (lower is better)
Translates to: TSIKQPGFPGGIPHTAKTLVILQ*LGLHMF
Trigger: AAACATATGCAGTCCCAGCAACTGGAGAATTACAAG...AGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp ATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCTTGTAATTCTCCAGTaGCTGGGACTGCATATGTTT +
Preference number: 5 (lower is better)
Translates to: IKNLYKTTWLSRWNSAYSLVILQ*LGLHMF
Trigger: AAACATATGCAGTCCCAGCAACTGGAGAATTACAAG...GCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp AAGTCTTCCAGATGCAGCAGGTTGTTCTCTACCTCCTCAAAACTCGCCTCTAAAGAGCATGTCAAATCTTaGAGAAGAATTCATGACGGA +
Preference number: 5 (lower is better)
Translates to: KSSRCSRLFSTSSKLASKEHVKS*RRIHDG
Trigger: TCCGTCATGAATTCTTCTCAAAGATTTGACATGCTC...TTTAGAGGCGAGTTTTGAGGAGGTAGAGAACAACCTGCTGCATCTGGAAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506844.1
CDS-3UTR CAA 90 bp AAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACATCCAGCAGAGTACTTaGGCAAAAATGGAACAGTCC +
Preference number: 5 (lower is better)
Translates to: KIKNLYKTTWLSRWNSAYIQQST*AKMEQS
Trigger: GGACTGTTCCATTTTTGCCAAAGTACTCTGCTGGAT...GTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344537.10
ENST00000510395.5
ENST00000513680.5
CDS-3UTR CAA 90 bp ACTGACCTTCAGCAGTTCTCCAATTTTATGGAACTAAATAGGCTCTTCAAGGAATCAGCTAATGCAAGTTaGTCAACCCTACCTAAGGCG +
Preference number: 5 (lower is better)
Translates to: TDLQQFSNFMELNRLFKESANAS*STLPKA
Trigger: CGCCTTAGGTAGGGTTGACAAACTTGCATTAGCTGA...TTCCTTGAAGAGCCTATTTAGTTCCATAAAATTGGAGAACTGCTGAAGGTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CAA 90 bp TATGTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCTCCAGATGCAGCAGGTaGTTCTCTACCTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: YVKIKNLYKTTWLSRWNSSRCSR*FSTSSK
Trigger: TTTTGAGGAGGTAGAGAACAACCTGCTGCATCTGGA...GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp TATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACAGCCAAAACTGGATTTGGGACTGCATATGTTaGCATCTTTCTAATTCACAC +
Preference number: 5 (lower is better)
Translates to: YKTTWLSRWNSAYSQNWIWDCIC*HLSNSH
Trigger: GTGTGAATTAGAAAGATGCAAACATATGCAGTCCCA...AATCCAGTTTTGGCTGTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp AAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACCTTGTAATTCTCCAGTaGCTGGGACTGCATATGTTT +
Preference number: 5 (lower is better)
Translates to: KIKNLYKTTWLSRWNSAYLVILQ*LGLHMF
Trigger: AAACATATGCAGTCCCAGCAACTGGAGAATTACAAG...GTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp AAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATACTGGGACTGCATATGTTaGCATCTTTCTAATTCACAC +
Preference number: 5 (lower is better)
Translates to: KIKNLYKTTWLSRWNSAYWDCIC*HLSNSH
Trigger: GTGTGAATTAGAAAGATGCAAACATATGCAGTCCCA...GTATGCGGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp TATGTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCGCATCTAGTTCAGCTTaGAAGGTTTCAAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: YVKIKNLYKTTWLSRWNSASSSA*KVSSSF
Trigger: GAAGGAACTTGAAACCTTCAAAGCTGAACTAGATGC...GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS-3UTR CAA 90 bp TATGTAAAAATCAAGAACCTCTATAAAACAACCTGGCTTTCCAGGTGGAATTCCTCCTCATACCTGGGTTaGCTTTTCACTTTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: YVKIKNLYKTTWLSRWNSSSYLG*LFTFAS
Trigger: AGAAGCAAAAGTGAAAAGCAAACCCAGGTATGAGGA...GGAATTCCACCTGGAAAGCCAGGTTGTTTTATAGAGGTTCTTGATTTTTACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355917.7
ENST00000515875.5
CDS-3UTR CAA 90 bp AAGGAATCAAAATTCTATATGCAGGTGTCACTGTTTCTAAATCTTCCCCTGACTGAGCATGTCAAATCTTaGAGAAGAATTCATGACGGA +
Preference number: 5 (lower is better)
Translates to: KESKFYMQVSLFLNLPLTEHVKS*RRIHDG
Trigger: TCCGTCATGAATTCTTCTCAAAGATTTGACATGCTC...AGTCAGGGGAAGATTTAGAAACAGTGACACCTGCATATAGAATTTTGATTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338950.9
CDS-3UTR CAA 90 bp TTTTCTTGTAATTCTCCAGTTGCTGGGACTGCATATGTTTGCATCTTTCTAATTTGGGACTGCATATGTTaGCATCTTTCTAATTCACAC +
Preference number: 5 (lower is better)
Translates to: FSCNSPVAGTAYVCIFLIWDCIC*HLSNSH
Trigger: GTGTGAATTAGAAAGATGCAAACATATGCAGTCCCA...AATTAGAAAGATGCAAACATATGCAGTCCCAGCAACTGGAGAATTACAAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506844.1
ENST00000510395.5
ENST00000513680.5
CDS GCA 72 bp CCGCCGCCGGTCTCCTCTCCTCAGGCCTCGGGCTGCTaGTGCCTCTGTCGCCCCCTGGGTCCCACGCCGCCA +
Preference number: 6 (lower is better)
Translates to: PPPVSSPQASGC*CLCRPLGPTPP
Trigger: TGGCGGCGTGGGACCCAGGGGGCGACAGAGGCAGCAGCAGCCCGAGGCCTGAGGAGAGGAGACCGGCGGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338950.9
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000511762.2
ENST00000513680.5
ENST00000515875.5
ENST00000622898.4
CDS GCA 72 bp AGCTGCTCGCATCCACCCTCCAAGTGGATGGAGTCATaGCGCGTTTACAGACTGGGCTGGTGCCCCGACTGC +
Preference number: 6 (lower is better)
Translates to: SCSHPPSKWMES*RVYRLGWCPDC
Trigger: GCAGTCGGGGCACCAGCCCAGTCTGTAAACGCGGCATGACTCCATCCACTTGGAGGGTGGATGCGAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514651.1
CDS GCA 72 bp GCCCATGTATCCTCATACCCGGAGGTGAAATCCTGCTaGACGCTCAGCAGCCGCTCGCGAAGGGTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: AHVSSYPEVKSC*TLSSRSRRVSS
Trigger: GCTGGAGACCCTTCGCGAGCGGCTGCTGAGCGTGCAGCAGGATTTCACCTCCGGGTATGAGGATACATGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511762.2
ENST00000622898.4
CDS GCA 72 bp GCAGCCCATGTATCCTCATACCCGGAGGTGAAATCCTaGTGCACGCTCAGCAGCCGCTCGCGAAGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: AAHVSSYPEVKS*CTLSSRSRRVS
Trigger: GGAGACCCTTCGCGAGCGGCTGCTGAGCGTGCAGCAGGATTTCACCTCCGGGTATGAGGATACATGGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511762.2
ENST00000622898.4
CDS GCA 72 bp TTGTCAGCTGAAAGTGACCCGGAGGTGAAATCCTGCTaGACGCTCAGCAGCCGCTCGCGAAGGGTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: LSAESDPEVKSC*TLSSRSRRVSS
Trigger: GCTGGAGACCCTTCGCGAGCGGCTGCTGAGCGTGCAGCAGGATTTCACCTCCGGGTCACTTTCAGCTGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506844.1
ENST00000513680.5
CDS GCA 72 bp GGTTTGTCAGCTGAAAGTGACCCGGAGGTGAAATCCTaGTGCACGCTCAGCAGCCGCTCGCGAAGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: GLSAESDPEVKS*CTLSSRSRRVS
Trigger: GGAGACCCTTCGCGAGCGGCTGCTGAGCGTGCAGCAGGATTTCACCTCCGGGTCACTTTCAGCTGACAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506844.1
ENST00000513680.5
CDS GCA 72 bp TCACTTAAAGTCTTCAGCCCGGAGGTGAAATCCTGCTaGACGCTCAGCAGCCGCTCGCGAAGGGTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SLKVFSPEVKSC*TLSSRSRRVSS
Trigger: GCTGGAGACCCTTCGCGAGCGGCTGCTGAGCGTGCAGCAGGATTTCACCTCCGGGCTGAAGACTTTAAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338950.9
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000515875.5
CDS GCA 72 bp TTGTCACTTAAAGTCTTCAGCCCGGAGGTGAAATCCTaGTGCACGCTCAGCAGCCGCTCGCGAAGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: LSLKVFSPEVKS*CTLSSRSRRVS
Trigger: GGAGACCCTTCGCGAGCGGCTGCTGAGCGTGCAGCAGGATTTCACCTCCGGGCTGAAGACTTTAAGTGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338950.9
ENST00000344537.10
ENST00000355917.7
ENST00000510395.5
ENST00000515875.5
CDS GCA 72 bp TGCTGGGTGTGCTCCATTTCCAGGACCTTCTGGGCGTaGTCTGCATCTAGTTCAGCTGCTATGGATTCATGG +
Preference number: 6 (lower is better)
Translates to: CWVCSISRTFWA*SASSSAAMDSW
Trigger: CCATGAATCCATAGCAGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAATGGAGCACACCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509674.1
CDS CCA 72 bp TTCATTTGCTGGGTGTGCTCCATTTCCAGGACCTTCTaGGCGTGCTCTGCATCTAGTTCAGAGGGATCCCTC +
Preference number: 6 (lower is better)
Translates to: FICWVCSISRTF*ACSASSSEGSL
Trigger: GAGGGATCCCTCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAATGGAGCACACCCAGCAAATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462989.6
CDS TCA 72 bp ACATCAGGCACTAGAGGTCCGGGTCTACTGGGAGACTaGCATCACTTGGAGATGAGTTGTTTCTCCACCAGG +
Preference number: 6 (lower is better)
Translates to: TSGTRGPGLLGD*HHLEMSCFSTR
Trigger: CCTGGTGGAGAAACAACTCATCTCCAAGTGATGTCAGTCTCCCAGTAGACCCGGACCTCTAGTGCCTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506844.1
ENST00000513680.5
CDS CCA 72 bp TTCATTTGCTGGGTGTGCTCCATTTCCAGGACCTTCTaGGCGTGCTCTGCATCTAGTTCAGCTGCTATGGAT +
Preference number: 6 (lower is better)
Translates to: FICWVCSISRTF*ACSASSSAAMD
Trigger: ATCCATAGCAGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAATGGAGCACACCCAGCAAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509674.1
CDS CCA 72 bp TTCATTTGCTGGGTGTGCTCCATTTCCAGGACCTTCTaGGCGTGCTCTGCATCTAGTTCAGCTGAGGAAACA +
Preference number: 6 (lower is better)
Translates to: FICWVCSISRTF*ACSASSSAEET
Trigger: TGTTTCCTCAGCTGAACTAGATGCAGAGCACGCCCAGAAGGTCCTGGAAATGGAGCACACCCAGCAAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514651.1