RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DTNB (Homo sapiens)

Ensembl gene IDs: ENSG00000138101

Ensembl transcript IDs: ENST00000288642.12, ENST00000303659.8, ENST00000349996.6, ENST00000356599.9, ENST00000398951.6, ENST00000404103.7, ENST00000405222.5, ENST00000406818.7, ENST00000407038.7, ENST00000407186.5, ENST00000407661.7, ENST00000460418.1, ENST00000472690.5, ENST00000473113.1, ENST00000474987.5, ENST00000479898.5, ENST00000482145.5, ENST00000485845.5, ENST00000486555.5, ENST00000486826.1, ENST00000488457.1, ENST00000489756.1, ENST00000489949.5, ENST00000493386.5, ENST00000493538.5, ENST00000495466.6, ENST00000496972.6, ENST00000498437.1

Found 989 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGAAGGCCTCCTGCACGTCTCCCCCGACTCCGCTCAGCGAGTCCTaGGGACAGTGGGTGGGGGTGGAGCCGGCAGACGTGGAGCGCACT +
Preference number: 1 (lower is better)
Translates to: AKASCTSPPTPLSES*GQWVGVEPADVERT
Trigger: AGTGCGCTCCACGTCTGCCGGCTCCACCCCCACCCACTGTCCGCAGGACTCGCTGAGCGGAGTCGGGGGAGACGTGCAGGAGGCCTTCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR CCA 90 bp CCCTCCCCGCTTCCCACCGGCTCTGGCTCCCCTCTCCCTGGCGGGTaGAGTGACGTCTGGCAGCCTGCAAGCCTGGTCCAGGTGTGCGGT +
Preference number: 1 (lower is better)
Translates to: PSPLPTGSGSPLPGG*SDVWQPASLVQVCG
Trigger: ACCGCACACCTGGACCAGGCTTGCAGGCTGCCAGACGTCACTCCACCCGCCAGGGAGAGGGGAGCCAGAGCCGGTGGGAAGCGGGGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR CCA 90 bp CTGCGGACAGTGGGTGGGGGTGGAGCCGGCAGACGTGGAGCGCACTaGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATG +
Preference number: 1 (lower is better)
Translates to: LRTVGGGGAGRRGAH*HGHWPAASMGGRCM
Trigger: CATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTCTGCCGGCTCCACCCCCACCCACTGTCCGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR CCA 90 bp GACAGTGGGTGGGGGTGGAGCCGGCAGACGTGGAGCGCACTGGCATaGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTG +
Preference number: 1 (lower is better)
Translates to: DSGWGWSRQTWSALA*ALAGRLHGWAMYVV
Trigger: CACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTCTGCCGGCTCCACCCCCACCCACTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR CCA 90 bp CCCCTCTCCCTGGCGGGTGGAGTGACGTCTGGCAGCCTGCAAGCCTaGTCCAGGTGTGCGGTGGAAAGATGGAGAGGAATGTGCCTCTGG +
Preference number: 1 (lower is better)
Translates to: PLSLAGGVTSGSLQA*SRCAVERWRGMCLW
Trigger: CCAGAGGCACATTCCTCTCCATCTTTCCACCGCACACCTGGACCAGGCTTGCAGGCTGCCAGACGTCACTCCACCCGCCAGGGAGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR CCA 90 bp ACGTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTaGGCGATGTATGTGGTGACCCTGTGGCCTGAGCCTTCAGCAACT +
Preference number: 1 (lower is better)
Translates to: TWSALAWALAGRLHG*AMYVVTLWPEPSAT
Trigger: AGTTGCTGAAGGCTCAGGCCACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR GCA 90 bp TGGACCATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCTCTaGTCCAGTTCATCCTTCCTTTGCCTCAGCAGCCGCAGCTCTGCC +
Preference number: 1 (lower is better)
Translates to: WTISSRLLSCRADIL*SSSSFLCLSSRSSA
Trigger: GGCAGAGCTGCGGCTGCTGAGGCAAAGGAAGGATGAACTGGAGCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR GCA 90 bp GTGCGGTGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTaGCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCC +
Preference number: 1 (lower is better)
Translates to: VRWKDGEECASGGRP*LRHVGASLLLVLCA
Trigger: GGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCACCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR CCA 90 bp GCCTGGTCCAGGTGTGCGGTGGAAAGATGGAGAGGAATGTGCCTCTaGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCT +
Preference number: 1 (lower is better)
Translates to: AWSRCAVERWRGMCL*GKTLPSPCRRQLAP
Trigger: AGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCACCGCACACCTGGACCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR GCA 90 bp CTGCAAGCCTGGTCCAGGTGTGCGGTGGAAAGATGGAGAGGAATGTaGCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTT +
Preference number: 1 (lower is better)
Translates to: LQAWSRCAVERWRGM*LWGKTLPSPCRRQL
Trigger: AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCACCGCACACCTGGACCAGGCTTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR CCA 90 bp ACGTCTGGCAGCCTGCAAGCCTGGTCCAGGTGTGCGGTGGAAAGATaGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGT +
Preference number: 1 (lower is better)
Translates to: TSGSLQAWSRCAVER*RGMCLWGKTLPSPC
Trigger: ACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCACCGCACACCTGGACCAGGCTTGCAGGCTGCCAGACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR GCA 90 bp TCAGCAACTTCATCAGCTCTTCCAGCTGGACCATCAGCTCCCGCCTaGTCTCCTGCAGGGCCGACATCCTCTGCTCCAGTTCATCCTTCC +
Preference number: 1 (lower is better)
Translates to: SATSSALPAGPSAPA*SPAGPTSSAPVHPS
Trigger: GGAAGGATGAACTGGAGCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGGTCCAGCTGGAAGAGCTGATGAAGTTGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR TCA 90 bp GCTAACCTGAATGGAGCTCCTTCACCAGGGATGACATGGTGTTGGTaGTGGAGTCAGCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCC +
Preference number: 1 (lower is better)
Translates to: ANLNGAPSPGMTWCW*WSQLPPAGHCGGFS
Trigger: GGAGAAACCTCCGCAATGACCTGCTGGTGGCAGCTGACTCCATCACCAACACCATGTCATCCCTGGTGAAGGAGCTCCATTCAGGTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR CCA 90 bp GGGCCACATAGGAGGCTATCAGCGCATGCTCATCGGCCAAGTGACTaGGTATATCCTGGCTATACTGTAACCTCTTGGTGGGAGTGGGCA +
Preference number: 1 (lower is better)
Translates to: GPHRRLSAHAHRPSD*VYPGYTVTSWWEWA
Trigger: TGCCCACTCCCACCAAGAGGTTACAGTATAGCCAGGATATACCCAGTCACTTGGCCGATGAGCATGCGCTGATAGCCTCCTATGTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398951.6
3UTR GCA 90 bp GGGCGAGGAGGAACTATATGTGCAAGGTCAAGTGGTTTCTCTGGTTaGTCAGGAAAAACAGGATGCGGGGGTTCTCTCGTGGGTACACAC +
Preference number: 1 (lower is better)
Translates to: GRGGTICARSSGFSG*SGKTGCGGSLVGTH
Trigger: GTGTGTACCCACGAGAGAACCCCCGCATCCTGTTTTTCCTGAGCAACCAGAGAAACCACTTGACCTTGCACATATAGTTCCTCCTCGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR CCA 90 bp CAGAGGGCGAGGAGGAACTATATGTGCAAGGTCAAGTGGTTTCTCTaGTTGCTCAGGAAAAACAGGATGCGGGGGTTCTCTCGTGGGTAC +
Preference number: 1 (lower is better)
Translates to: QRARRNYMCKVKWFL*LLRKNRMRGFSRGY
Trigger: GTACCCACGAGAGAACCCCCGCATCCTGTTTTTCCTGAGCAACCAGAGAAACCACTTGACCTTGCACATATAGTTCCTCCTCGCCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR CCA 90 bp CTGTCCAGAACACTCTTGGTGGGAGTGGGCACTCCAGAGGACATGTaGCTAACCATGGTGTCATTCATATTAGTCAGAGGGCGAGGAGGA +
Preference number: 1 (lower is better)
Translates to: LSRTLLVGVGTPEDM*LTMVSFILVRGRGG
Trigger: TCCTCCTCGCCCTCTGACTAATATGAATGACACCATGGTTAGCCACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGTGTTCTGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356599.9
3UTR CCA 90 bp CTATACTGTAACCTCTTGGTGGGAGTGGGCACTCCAGAGGACATGTaGCTAACCATGGTGTCATTCATATTAGTCAGAGGGCGAGGAGGA +
Preference number: 1 (lower is better)
Translates to: LYCNLLVGVGTPEDM*LTMVSFILVRGRGG
Trigger: TCCTCCTCGCCCTCTGACTAATATGAATGACACCATGGTTAGCCACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGGTTACAGTATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398951.6
3UTR CCA 90 bp TCAACATGGGCAAGCCTGTGCATGAGAGGTAGCCAGACAAGGCACTaGGGAGGAGGGTCAGCCATCATTGTGTCTAAAAACATATTTAGC +
Preference number: 1 (lower is better)
Translates to: STWASLCMRGSQTRH*GGGSAIIVSKNIFS
Trigger: GCTAAATATGTTTTTAGACACAATGATGGCTGACCCTCCTCCCCAGTGCCTTGTCTGGCTACCTCTCATGCACAGGCTTGCCCATGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398951.6
3UTR CCA 90 bp GGGGGTTCTCTCGTGGGTACACACCCCAAAGATTTACTAATTGCATaGCTCAGCTTCTTTGCAGGAGATTTCCAAGAGGAATGCTCCTTC +
Preference number: 1 (lower is better)
Translates to: GGSLVGTHPKDLLIA*LSFFAGDFQEECSF
Trigger: GAAGGAGCATTCCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATGCAATTAGTAAATCTTTGGGGTGTGTACCCACGAGAGAACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR GCA 90 bp GGTGGAGCCGGCAGACGTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCTCCCGCCTGCTCTCCTaGAGGGCCGACATCCTCTGC +
Preference number: 2 (lower is better)
Translates to: GGAGRRGAHWHGHWPAASSRLLS*RADILC
Trigger: GCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGA...GGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTCTGCCGGCTCCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR CAA 90 bp GGGTGGGGGTGGAGCCGGCAGACGTGGAGCGCACTGGCATGGGCATaGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTG +
Preference number: 2 (lower is better)
Translates to: GWGWSRQTWSALAWA*AGRLHGWAMYVVTL
Trigger: CAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTCTGCCGGCTCCACCCCCACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp GACGTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATAGACGTGGAGCGCACTaGCATGGGCATTGGCCGGCC +
Preference number: 2 (lower is better)
Translates to: DVERTGMGIGRPPPWVGDRRGAH*HGHWPA
Trigger: GGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTCT...ATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGGCTTCCCACCGGCTCTaGCTCCCCTCTCCCTGGCGG +
Preference number: 2 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLASHRL*LPSPWR
Trigger: CCGCCAGGGAGAGGGGAGCCAGAGCCGGTGGGAAGC...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp ATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCTCTGCTCCAGTTCATCCGCTTCCCACCGGCTCTaGCTCCCCTCTCCCTGGCGG +
Preference number: 2 (lower is better)
Translates to: ISSRLLSCRADILCSSSSASHRL*LPSPWR
Trigger: CCGCCAGGGAGAGGGGAGCCAGAGCCGGTGGGAAGC...GGATGAACTGGAGCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR TCA 90 bp GCTCTTCCAGCTGGACCATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCCTCGTCCTCTGTGCCTaGGCTTCCTCTGTGTCCGGC +
Preference number: 2 (lower is better)
Translates to: ALPAGPSAPACSPAGPTSLVLCA*ASSVSG
Trigger: GCCGGACACAGAGGAAGCTCAGGCACAGAGGACGAG...GGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGGTCCAGCTGGAAGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR GCA 90 bp GCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTGGCCTGAGCCTTCATCTGGTGCTGGTTaGTGTGAGGGCCGCCGGCAT +
Preference number: 2 (lower is better)
Translates to: AGRLHGWAMYVVTLWPEPSSGAG*CEGRRH
Trigger: ATGCCGGCGGCCCTCACAGCAACCAGCACCAGATGA...AGGCTCAGGCCACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR GCA 90 bp ATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTGGTGGGCTGGGAGGCCTaGTCGTGTTCCAGGCGGAGA +
Preference number: 2 (lower is better)
Translates to: MGIGRPPPWVGDVCGDPVVGWEA*SCSRRR
Trigger: TCTCCGCCTGGAACACGAGCAGGCCTCCCAGCCCAC...CACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp GCTCTTCCAGCTGGACCATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCGGGTGGAGTGACGTCTaGCAGCCTGCAAGCCTGGTC +
Preference number: 2 (lower is better)
Translates to: ALPAGPSAPACSPAGPTSGWSDV*QPASLV
Trigger: GACCAGGCTTGCAGGCTGCCAGACGTCACTCCACCC...GGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGGTCCAGCTGGAAGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTGCTTCCCACCGGCTCTaGCTCCCCTCTCCCTGGCGG +
Preference number: 2 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTASHRL*LPSPWR
Trigger: CCGCCAGGGAGAGGGGAGCCAGAGCCGGTGGGAAGC...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp ATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTGGGCCGGCCGCCTCCATaGGTGGGCGATGTATGTGGT +
Preference number: 2 (lower is better)
Translates to: MGIGRPPPWVGDVCGDPVGRPPP*VGDVCG
Trigger: ACCACATACATCGCCCACCCATGGAGGCGGCCGGCC...CACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR GCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCACCGCTCAGCGAGTCCTaGGGACAGTGGGTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPPLSES*GQWVGV
Trigger: CACCCCCACCCACTGTCCGCAGGACTCGCTGAGCGG...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR TCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTCTCGTCCTCTGTGCCTaGGCTTCCTCTGTGTCCGGC +
Preference number: 2 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPALVLCA*ASSVSG
Trigger: GCCGGACACAGAGGAAGCTCAGGCACAGAGGACGAG...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR GCA 90 bp GACGTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATACATGGGCAAGCCTGTaGATGAGAGGTAGCCAGACA +
Preference number: 2 (lower is better)
Translates to: DVERTGMGIGRPPPWVGDTWASL*MRGSQT
Trigger: TGTCTGGCTACCTCTCATGCACAGGCTTGCCCATGT...ATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR GCA 90 bp GACGTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATAGGGCCGACATCCTCTaGTCCAGTTCATCCTTCCTT +
Preference number: 2 (lower is better)
Translates to: DVERTGMGIGRPPPWVGDRADIL*SSSSFL
Trigger: AAGGAAGGATGAACTGGAGCAGAGGATGTCGGCCCT...ATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCCCTCTCCCTGGCGGGTaGAGTGACGTCTGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSPLPGG*SDVWQP
Trigger: AGGCTGCCAGACGTCACTCCACCCGCCAGGGAGAGG...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp GTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTACACTCTTGGTGGGAGTaGGCACTCCAGAGGACATGT +
Preference number: 2 (lower is better)
Translates to: VERTGMGIGRPPPWVGDVHSWWE*ALQRTC
Trigger: ACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGTG...TACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356599.9
3UTR-3UTR TCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCTCGTCCTCTGTGCCTaGGCTTCCTCTGTGTCCGGC +
Preference number: 2 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRLVLCA*ASSVSG
Trigger: GCCGGACACAGAGGAAGCTCAGGCACAGAGGACGAG...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR TCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGCCCTGGCGGGTGGAGTaGCGTCTGGCAGCCTGCAAG +
Preference number: 2 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSPWRVE*RLAACK
Trigger: CTTGCAGGCTGCCAGACGTCACTCCACCCGCCAGGG...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR TCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGCCCTGGCGGGTGGAGTaGCGTCTGGCAGCCTGCAAG +
Preference number: 2 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQPWRVE*RLAACK
Trigger: CTTGCAGGCTGCCAGACGTCACTCCACCCGCCAGGG...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR TCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCGGGCAAGCCTGTGCATaGGAGGTAGCCAGACAAGGC +
Preference number: 2 (lower is better)
Translates to: DGEECASGGRPCLRHVGAGQACA*EVARQG
Trigger: GCCTTGTCTGGCTACCTCTCATGCACAGGCTTGCCC...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR TCA 90 bp GTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGCTCATCGGCCAAGTaGCTGGGTATATCCTGGCTA +
Preference number: 2 (lower is better)
Translates to: VERTGMGIGRPPPWVGDVCSSAK*LGISWL
Trigger: TAGCCAGGATATACCCAGTCACTTGGCCGATGAGCA...TACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398951.6
3UTR-3UTR GCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTTCTGGGGGAAGACCTTaGCTTCGCCATGTCGGCGCC +
Preference number: 2 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTSGGRP*LRHVGA
Trigger: GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR GCA 90 bp GCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTGGCCTGAGCCTAGATGGAGAGGAATGTaGCTCTGGGGGAAGACCTTG +
Preference number: 2 (lower is better)
Translates to: AGRLHGWAMYVVTLWPEPRWRGM*LWGKTL
Trigger: CAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT...AGGCTCAGGCCACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp CAGCTGGACCATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCTCTGCTCAGAGGAATGTGCCTCTaGGGGAAGACCTTGCCTTCG +
Preference number: 2 (lower is better)
Translates to: QLDHQLPPALLQGRHPLLRGMCL*GKTLPS
Trigger: CGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT...GAGCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGGTCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp GCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCGGGTGGAGTGACGTCTaGCAGCCTGCAAGCCTGGTC +
Preference number: 2 (lower is better)
Translates to: AATSRSLRRFLLVPCAKAGWSDV*QPASLV
Trigger: GACCAGGCTTGCAGGCTGCCAGACGTCACTCCACCC...GGCCTTCGCACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCGGGTGGAGTGACGTCTaGCAGCCTGCAAGCCTGGTC +
Preference number: 2 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSGWSDV*QPASLV
Trigger: GACCAGGCTTGCAGGCTGCCAGACGTCACTCCACCC...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp CAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCTCCTGCACCACTGGCATGGGCATTaGCCGGCCGCCTCCATGGGT +
Preference number: 2 (lower is better)
Translates to: QQVIAEVSPRTLCEGLLHHWHGH*PAASMG
Trigger: ACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTG...GTGCAGGAGGCCTTCGCACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR CAA 90 bp TGTGCGGTGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTaGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGC +
Preference number: 2 (lower is better)
Translates to: CAVERWRGMCLWGKT*PSPCRRQLAPRPLC
Trigger: GCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCACCGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR TCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCCCTGGCGGGTGGAGTaGCGTCTGGCAGCCTGCAAG +
Preference number: 2 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVPWRVE*RLAACK
Trigger: CTTGCAGGCTGCCAGACGTCACTCCACCCGCCAGGG...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR TCA 90 bp GCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCGGGCAAGCCTGTGCATaGGAGGTAGCCAGACAAGGC +
Preference number: 2 (lower is better)
Translates to: AATSRSLRRFLLVPCAKAGQACA*EVARQG
Trigger: GCCTTGTCTGGCTACCTCTCATGCACAGGCTTGCCC...GGCCTTCGCACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR GCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCATGTCGGCGCCAGCTTaGTCCTCGTCCTCTGTGCCT +
Preference number: 2 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSMSAPA*SSSSVP
Trigger: AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACAT...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR GCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTATGTCGGCGCCAGCTTaGTCCTCGTCCTCTGTGCCT +
Preference number: 2 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTMSAPA*SSSSVP
Trigger: AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACAT...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR GCA 90 bp ATGGAGTCAGCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTCCGCTCAGCGAGTCCTaGGGACAGTGGGTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: MESAATSRSLRRFLLVPCPLSES*GQWVGV
Trigger: CACCCCCACCCACTGTCCGCAGGACTCGCTGAGCGG...ACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGCTGACTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR GCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGTGTGCGAAGGCCTCCTaGACGTCTCCCCCGACTCCG +
Preference number: 2 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSCAKAS*TSPPTP
Trigger: CGGAGTCGGGGGAGACGTGCAGGAGGCCTTCGCACA...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR GCA 90 bp GTGATGGAGTCAGCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCTCCTaGACGTCTCCCCCGACTCCG +
Preference number: 2 (lower is better)
Translates to: VMESAATSRSLRRFLLVPCAKAS*TSPPTP
Trigger: CGGAGTCGGGGGAGACGTGCAGGAGGCCTTCGCACA...AGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGCTGACTCCATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGCCTCTCCCTGGCGGGTaGAGTGACGTCTGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQPLPGG*SDVWQP
Trigger: AGGCTGCCAGACGTCACTCCACCCGCCAGGGAGAGG...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGCCTCTCCCTGGCGGGTaGAGTGACGTCTGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSPLPGG*SDVWQP
Trigger: AGGCTGCCAGACGTCACTCCACCCGCCAGGGAGAGG...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp GTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTAGAGCACTCCACGGGATaGAAGACATTCTCAACATGG +
Preference number: 2 (lower is better)
Translates to: VERTGMGIGRPPPWVGDVEHSTG*KTFSTW
Trigger: CCATGTTGAGAATGTCTTCCATCCCGTGGAGTGCTC...TACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGGCGGGGGTTCTCTCGTaGGTACACACCCCAAAGATT +
Preference number: 2 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLAGVLS*VHTPKI
Trigger: AATCTTTGGGGTGTGTACCCACGAGAGAACCCCCGC...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp GTGATGGAGTCAGCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTGTGCCTTCTCAGGGGTaGGCTGGGAGGCCTGCTCGT +
Preference number: 2 (lower is better)
Translates to: VMESAATSRSLRRFLLVPVPSQG*AGRPAR
Trigger: ACGAGCAGGCCTCCCAGCCCACCCCTGAGAAGGCAC...AGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGCTGACTCCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp TCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCTCTGCTCCAGTTCATCCTATCAGCTCTTCCAGCTaGACCATCAGCTCCCGCCTG +
Preference number: 2 (lower is better)
Translates to: SAPACSPAGPTSSAPVHPISSSS*TISSRL
Trigger: CAGGCGGGAGCTGATGGTCCAGCTGGAAGAGCTGAT...AGGATGAACTGGAGCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp ATGGAGTCAGCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGAGTCCTGCGGACAGTaGGTGGGGGTGGAGCCGGCA +
Preference number: 2 (lower is better)
Translates to: MESAATSRSLRRFLLVPCESCGQ*VGVEPA
Trigger: TGCCGGCTCCACCCCCACCCACTGTCCGCAGGACTC...ACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGCTGACTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR TCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGCTCGTCCTCTGTGCCTaGGCTTCCTCTGTGTCCGGC +
Preference number: 2 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQLVLCA*ASSVSG
Trigger: GCCGGACACAGAGGAAGCTCAGGCACAGAGGACGAG...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR TCA 90 bp ATGGCCACGCCAAAAGCAATTCTGGCAGAGCTGATAGTTGTGGCACTGCTGGCACCCTGGCGGGTGGAGTaGCGTCTGGCAGCCTGCAAG +
Preference number: 2 (lower is better)
Translates to: MATPKAILAELIVVALLAPWRVE*RLAACK
Trigger: CTTGCAGGCTGCCAGACGTCACTCCACCCGCCAGGG...TGCCAGCAGTGCCACAACTATCAGCTCTGCCAGAATTGCTTTTGGCGTGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR TCA 90 bp GCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCTCCAGGCGGAGACGCTaGATCTCCTGCAGGATCTCT +
Preference number: 2 (lower is better)
Translates to: AATSRSLRRFLLVPCAKASRRRR*ISCRIS
Trigger: AGAGATCCTGCAGGAGATTCAGCGTCTCCGCCTGGA...GGCCTTCGCACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR GCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCAGCCTGGTCCAGGTGTaGGGTGGAAAGATGGAGAGG +
Preference number: 2 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSSLVQV*GGKMER
Trigger: CCTCTCCATCTTTCCACCGCACACCTGGACCAGGCT...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR GCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGCAGCCGCAGCTCTaGCAGCAGCGTGGGGTTCTG +
Preference number: 2 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVQQPQL*QQRGVL
Trigger: CAGAACCCCACGCTGCTGGCAGAGCTGCGGCTGCTG...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR GCA 90 bp ACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACAGGGCCGACATCCTCTaGTCCAGTTCATCCTTCCTT +
Preference number: 2 (lower is better)
Translates to: TGMGIGRPPPWVGDVCGDRADIL*SSSSFL
Trigger: AAGGAAGGATGAACTGGAGCAGAGGATGTCGGCCCT...GTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGCAGCCTGCAAGCCTaGTCCAGGTGTGCGGTGGAA +
Preference number: 2 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQGSLQA*SRCAVE
Trigger: TTCCACCGCACACCTGGACCAGGCTTGCAGGCTGCC...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGGCAGCCTGCAAGCCTaGTCCAGGTGTGCGGTGGAA +
Preference number: 2 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSGSLQA*SRCAVE
Trigger: TTCCACCGCACACCTGGACCAGGCTTGCAGGCTGCC...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGGGTGGAGTGACGTCTaGCAGCCTGCAAGCCTGGTC +
Preference number: 2 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSGWSDV*QPASLV
Trigger: GACCAGGCTTGCAGGCTGCCAGACGTCACTCCACCC...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCACCAGAACACTCTTGGTaGGAGTGGGCACTCCAGAGG +
Preference number: 2 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPPEHSW*EWALQR
Trigger: CCTCTGGAGTGCCCACTCCCACCAAGAGTGTTCTGG...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356599.9
3UTR-3UTR CCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTATGTGGTGACCCTGTaGCCTGAGCCTTCAGCAACT +
Preference number: 2 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLYVVTL*PEPSAT
Trigger: AGTTGCTGAAGGCTCAGGCCACAGGGTCACCACATA...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp CAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCTCCTGCACAGCCAGACAAGGCACTaGGGAGGAGGGTCAGCCATC +
Preference number: 2 (lower is better)
Translates to: QQVIAEVSPRTLCEGLLHSQTRH*GGGSAI
Trigger: GATGGCTGACCCTCCTCCCCAGTGCCTTGTCTGGCT...GTGCAGGAGGCCTTCGCACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398951.6
3UTR-3UTR CCA 90 bp TGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCTCCTGCACGTCTCCCCCGAACCTCTTGGTGGGAGTaGGCACTCCAGAGGACATGT +
Preference number: 2 (lower is better)
Translates to: CGGFSSYLVRRPPARLPRTSWWE*ALQRTC
Trigger: ACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGGT...TCGGGGGAGACGTGCAGGAGGCCTTCGCACAAGGTACGAGGAGAAACCTCCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398951.6
3UTR-3UTR TCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCTCGTCCTCTGTGCCTaGGCTTCCTCTGTGTCCGGC +
Preference number: 2 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVLVLCA*ASSVSG
Trigger: GCCGGACACAGAGGAAGCTCAGGCACAGAGGACGAG...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR GCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGATGTCGGCGCCAGCTTaGTCCTCGTCCTCTGTGCCT +
Preference number: 2 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQMSAPA*SSSSVP
Trigger: AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACAT...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAAGAGGAATGTGCCTCTaGGGGAAGACCTTGCCTTCG +
Preference number: 2 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPRGMCL*GKTLPS
Trigger: CGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp ATGGAGTCAGCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGGCAGCCTGCAAGCCTaGTCCAGGTGTGCGGTGGAA +
Preference number: 2 (lower is better)
Translates to: MESAATSRSLRRFLLVPCGSLQA*SRCAVE
Trigger: TTCCACCGCACACCTGGACCAGGCTTGCAGGCTGCC...ACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGCTGACTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGGGGTGGAGTGACGTCTaGCAGCCTGCAAGCCTGGTC +
Preference number: 2 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVGWSDV*QPASLV
Trigger: GACCAGGCTTGCAGGCTGCCAGACGTCACTCCACCC...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp ACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCTCCTGCATCAGCTCTTCCAGCTaGACCATCAGCTCCCGCCTG +
Preference number: 2 (lower is better)
Translates to: TSRSLRRFLLVPCAKASCISSSS*TISSRL
Trigger: CAGGCGGGAGCTGATGGTCCAGCTGGAAGAGCTGAT...GCAGGAGGCCTTCGCACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR TCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTTTCAACCTCCAGGTaGATTCCTGATGCGGAGATG +
Preference number: 2 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSFSTSR*IPDAEM
Trigger: CATCTCCGCATCAGGAATTCACCTGGAGGTTGAAAA...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR GCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTATGTCGGCGCCAGCTTaGTCCTCGTCCTCTGTGCCT +
Preference number: 2 (lower is better)
Translates to: EMRPCPEGSDEGASTCRAMSAPA*SSSSVP
Trigger: AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACAT...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR GCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGATGTCGGCGCCAGCTTaGTCCTCGTCCTCTGTGCCT +
Preference number: 2 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVMSAPA*SSSSVP
Trigger: AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACAT...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR GCA 90 bp ACTCTTGGTGGGAGTGGGCACTCCAGAGGACATGTGGCTAACCATGGTGTCATTTCTGGGGGAAGACCTTaGCTTCGCCATGTCGGCGCC +
Preference number: 2 (lower is better)
Translates to: TLGGSGHSRGHVANHGVISGGRP*LRHVGA
Trigger: GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA...AATGACACCATGGTTAGCCACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356599.9
3UTR-3UTR GCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGATGGAGAGGAATGTaGCTCTGGGGGAAGACCTTG +
Preference number: 2 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTRWRGM*LWGKTL
Trigger: CAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR GCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGAGCCTGGTCCAGGTGTaGGGTGGAAAGATGGAGAGG +
Preference number: 2 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSSLVQV*GGKMER
Trigger: CCTCTCCATCTTTCCACCGCACACCTGGACCAGGCT...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCGGTGGAAAGATaGAGAGGAATGTGCCTCTGG +
Preference number: 2 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSCAVER*RGMCLW
Trigger: CCAGAGGCACATTCCTCTCCATCTTTCCACCGCACA...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp ACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCTCCTGCACTGTAACCTCTTGGTaGGAGTGGGCACTCCAGAGG +
Preference number: 2 (lower is better)
Translates to: TSRSLRRFLLVPCAKASCTVTSW*EWALQR
Trigger: CCTCTGGAGTGCCCACTCCCACCAAGAGGTTACAGT...GCAGGAGGCCTTCGCACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398951.6
3UTR-3UTR GCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTAGCCTGGTCCAGGTGTaGGGTGGAAAGATGGAGAGG +
Preference number: 2 (lower is better)
Translates to: EMRPCPEGSDEGASTCRASLVQV*GGKMER
Trigger: CCTCTCCATCTTTCCACCGCACACCTGGACCAGGCT...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGAGAGGAATGTGCCTCTaGGGGAAGACCTTGCCTTCG +
Preference number: 2 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSRGMCL*GKTLPS
Trigger: CGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp AGAGGGCGAGGAGGAACTATATGTGCAAGGTCAAGTGGTTTCTCTGGTTGCTCACCTCTCCCTGGCGGGTaGAGTGACGTCTGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: RGRGGTICARSSGFSGCSPLPGG*SDVWQP
Trigger: AGGCTGCCAGACGTCACTCCACCCGCCAGGGAGAGG...TGAGCAACCAGAGAAACCACTTGACCTTGCACATATAGTTCCTCCTCGCCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR TCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCATTTTCAACCTCCAGGTaGATTCCTGATGCGGAGATG +
Preference number: 2 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPFSTSR*IPDAEM
Trigger: CATCTCCGCATCAGGAATTCACCTGGAGGTTGAAAA...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR GCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGAGATGGAGAGGAATGTaGCTCTGGGGGAAGACCTTG +
Preference number: 2 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSRWRGM*LWGKTL
Trigger: CAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR GCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGAGATGGAGAGGAATGTaGCTCTGGGGGAAGACCTTG +
Preference number: 2 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQRWRGM*LWGKTL
Trigger: CAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR GCA 90 bp CAGAACACTCTTGGTGGGAGTGGGCACTCCAGAGGACATGTGGCTAACCATGGTGCGGAGATGAGACCATaGCCTGAGGGGAGTGATGAA +
Preference number: 2 (lower is better)
Translates to: QNTLGGSGHSRGHVANHGAEMRP*PEGSDE
Trigger: TTCATCACTCCCCTCAGGGCATGGTCTCATCTCCGC...ACCATGGTTAGCCACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356599.9
3UTR-3UTR CCA 90 bp ATGGAGTCAGCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGCGGGGGTTCTCTCGTaGGTACACACCCCAAAGATT +
Preference number: 2 (lower is better)
Translates to: MESAATSRSLRRFLLVPCAGVLS*VHTPKI
Trigger: AATCTTTGGGGTGTGTACCCACGAGAGAACCCCCGC...ACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGCTGACTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR TCA 90 bp TCATTCATATTAGTCAGAGGGCGAGGAGGAACTATATGTGCAAGGTCAAGTGGTCCCTGGCGGGTGGAGTaGCGTCTGGCAGCCTGCAAG +
Preference number: 2 (lower is better)
Translates to: SFILVRGRGGTICARSSGPWRVE*RLAACK
Trigger: CTTGCAGGCTGCCAGACGTCACTCCACCCGCCAGGG...ACCACTTGACCTTGCACATATAGTTCCTCCTCGCCCTCTGACTAATATGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR TCA 90 bp ATGGAGTCAGCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTCTCCTTCACCAGGGATaGCATGGTGTTGGTGATGGA +
Preference number: 2 (lower is better)
Translates to: MESAATSRSLRRFLLVPCLLHQG*HGVGDG
Trigger: TCCATCACCAACACCATGTCATCCCTGGTGAAGGAG...ACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGCTGACTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR GCA 90 bp TGCATGGCTCAGCTTCTTTGCAGGAGATTTCCAAGAGGAATGCTCCTTCATCTGTCTGGGGGAAGACCTTaGCTTCGCCATGTCGGCGCC +
Preference number: 2 (lower is better)
Translates to: CMAQLLCRRFPRGMLLHLSGGRP*LRHVGA
Trigger: GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA...CAGATGAAGGAGCATTCCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR TCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGTTTTCAACCTCCAGGTaGATTCCTGATGCGGAGATG +
Preference number: 2 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSFSTSR*IPDAEM
Trigger: CATCTCCGCATCAGGAATTCACCTGGAGGTTGAAAA...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CCA 90 bp CATGGTGTCATTCATATTAGTCAGAGGGCGAGGAGGAACTATATGTGCAAGGTCGGCAGCCTGCAAGCCTaGTCCAGGTGTGCGGTGGAA +
Preference number: 2 (lower is better)
Translates to: HGVIHISQRARRNYMCKVGSLQA*SRCAVE
Trigger: TTCCACCGCACACCTGGACCAGGCTTGCAGGCTGCC...GACCTTGCACATATAGTTCCTCCTCGCCCTCTGACTAATATGAATGACACCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp CAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCTCCTGCACGTCAAGTGGTTTCTCTaGTTGCTCAGGAAAAACAGG +
Preference number: 2 (lower is better)
Translates to: QQVIAEVSPRTLCEGLLHVKWFL*LLRKNR
Trigger: CCTGTTTTTCCTGAGCAACCAGAGAAACCACTTGAC...GTGCAGGAGGCCTTCGCACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp GTGATGGAGTCAGCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTCATCGGCCAAGTGACTaGGTATATCCTGGCTATACT +
Preference number: 2 (lower is better)
Translates to: VMESAATSRSLRRFLLVPHRPSD*VYPGYT
Trigger: AGTATAGCCAGGATATACCCAGTCACTTGGCCGATG...AGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGCTGACTCCATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398951.6
3UTR CAA 90 bp AGGGCGAGGAGGAACTATATGTGCAAGGTCAAGTGGTTTCTCTGGTaGCTCAGGAAAAACAGGATGCGGGGGTTCTCTCGTGGGTACACA +
Preference number: 2 (lower is better)
Translates to: RARRNYMCKVKWFLW*LRKNRMRGFSRGYT
Trigger: TGTGTACCCACGAGAGAACCCCCGCATCCTGTTTTTCCTGAGCAACCAGAGAAACCACTTGACCTTGCACATATAGTTCCTCCTCGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR TCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGTTTTCAACCTCCAGGTaGATTCCTGATGCGGAGATG +
Preference number: 2 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVFSTSR*IPDAEM
Trigger: CATCTCCGCATCAGGAATTCACCTGGAGGTTGAAAA...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR GCA 90 bp ATGGAGTCAGCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGATTTCCAAGAGGAATaGTCCTTCATCTGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: MESAATSRSLRRFLLVPCDFQEE*SFIWCW
Trigger: CCAGCACCAGATGAAGGAGCATTCCTCTTGGAAATC...ACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGCTGACTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp GCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCGATTTACTAATTGCATaGCTCAGCTTCTTTGCAGGA +
Preference number: 2 (lower is better)
Translates to: AATSRSLRRFLLVPCAKADLLIA*LSFFAG
Trigger: TCCTGCAAAGAAGCTGAGCCATGCAATTAGTAAATC...GGCCTTCGCACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CCA 90 bp CATGGTGTCATTCATATTAGTCAGAGGGCGAGGAGGAACTATATGTGCAAGGTCTGTGCGGTGGAAAGATaGAGAGGAATGTGCCTCTGG +
Preference number: 2 (lower is better)
Translates to: HGVIHISQRARRNYMCKVCAVER*RGMCLW
Trigger: CCAGAGGCACATTCCTCTCCATCTTTCCACCGCACA...GACCTTGCACATATAGTTCCTCCTCGCCCTCTGACTAATATGAATGACACCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR CAA 90 bp CAGGATCTCTCTGTTTTTGTTTTCCAGTTCTGCAATAAGCTGTCTTaGTTGTTTGTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: QDLSVFVFQFCNKLS*LFVGIKVKAQVSGR
Trigger: CCTCCCACTGACTTGAGCTTTAACTTTGATGCCAACAAACAACAAAGACAGCTTATTGCAGAACTGGAAAACAAAAACAGAGAGATCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR GCA 72 bp TCCTGCACGTCTCCCCCGACTCCGCTCAGCGAGTCCTaGGGACAGTGGGTGGGGGTGGAGCCGGCAGACGTG +
Preference number: 3 (lower is better)
Translates to: SCTSPPTPLSES*GQWVGVEPADV
Trigger: CACGTCTGCCGGCTCCACCCCCACCCACTGTCCGCAGGACTCGCTGAGCGGAGTCGGGGGAGACGTGCAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR CCA 72 bp GGAGCCGGCAGACGTGGAGCGCACTGGCATGGGCATTaGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGG +
Preference number: 3 (lower is better)
Translates to: GAGRRGAHWHGH*PAASMGGRCMW
Trigger: CCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTCTGCCGGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR CCA 72 bp GCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTaGGCGATGTATGTGGTGACCCTGTGGCCTGAGCCT +
Preference number: 3 (lower is better)
Translates to: ALAWALAGRLHG*AMYVVTLWPEP
Trigger: AGGCTCAGGCCACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CAA 90 bp ACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCTCTGGGGGAAGACCTaGCCTTCGCCATGTCGGCGC +
Preference number: 3 (lower is better)
Translates to: TGMGIGRPPPWVGDVCGDLWGKT*PSPCRR
Trigger: GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAG...GTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR GCA 72 bp CGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCTCCTaGACGTCTCCCCCGACTCCGCTCAGCGAGTCCTGC +
Preference number: 3 (lower is better)
Translates to: RRFLLVPCAKAS*TSPPTPLSESC
Trigger: GCAGGACTCGCTGAGCGGAGTCGGGGGAGACGTGCAGGAGGCCTTCGCACAAGGTACGAGGAGAAACCTCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR GCA 72 bp AGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCTCTaGTCCAGTTCATCCTTCCTTTGCCTCAGCAGCCGC +
Preference number: 3 (lower is better)
Translates to: SSRLLSCRADIL*SSSSFLCLSSR
Trigger: GCGGCTGCTGAGGCAAAGGAAGGATGAACTGGAGCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CAA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTCATGTCGGCGCCAGCTaGCTCCTCGTCCTCTGTGCC +
Preference number: 3 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTHVGAS*LLVLCA
Trigger: GGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATG...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CAA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCCATGTCGGCGCCAGCTaGCTCCTCGTCCTCTGTGCC +
Preference number: 3 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSHVGAS*LLVLCA
Trigger: GGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATG...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CAA 90 bp CAGCTGGACCATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCTCTGCTCCAGTTCATCCTTCCTTaGCCTCAGCAGCCGCAGCTC +
Preference number: 3 (lower is better)
Translates to: QLDHQLPPALLQGRHPLLQFILP*PQQPQL
Trigger: GAGCTGCGGCTGCTGAGGCAAAGGAAGGATGAACTG...GAGCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGGTCCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CAA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCACTGGCATGGGCATaGGCCGGCCGCCTCCATGGG +
Preference number: 3 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSALAWA*AGRLHG
Trigger: CCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGC...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CAA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGGTTTCTCCTCGTACCTaGTGCGAAGGCCTCCTGCAC +
Preference number: 3 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLVSPRT*CEGLLH
Trigger: GTGCAGGAGGCCTTCGCACAAGGTACGAGGAGAAAC...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR TCA 72 bp TGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTaGCCCTGTGGCCTGAGCCTTCAGCAACTTCATCAG +
Preference number: 3 (lower is better)
Translates to: WPAASMGGRCMW*PCGLSLQQLHQ
Trigger: CTGATGAAGTTGCTGAAGGCTCAGGCCACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR GCA 72 bp GGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTaGTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTGT +
Preference number: 3 (lower is better)
Translates to: GEDLAFAMSAPA*SSSSVPELPLC
Trigger: ACACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CAA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGCTCTGGGGGAAGACCTaGCCTTCGCCATGTCGGCGC +
Preference number: 3 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSLWGKT*PSPCRR
Trigger: GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAG...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CAA 90 bp GCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTGGCCTGAGCCTCATGGCTCAGCTTCTTaGCAGGAGATTTCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: AGRLHGWAMYVVTLWPEPHGSAS*QEISKR
Trigger: CCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATG...AGGCTCAGGCCACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR CCA 72 bp AGGTGTGCGGTGGAAAGATGGAGAGGAATGTGCCTCTaGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAG +
Preference number: 3 (lower is better)
Translates to: RCAVERWRGMCL*GKTLPSPCRRQ
Trigger: CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCACCGCACACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CAA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTCATGTCGGCGCCAGCTaGCTCCTCGTCCTCTGTGCC +
Preference number: 3 (lower is better)
Translates to: EMRPCPEGSDEGASTCRAHVGAS*LLVLCA
Trigger: GGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATG...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR GCA 72 bp AAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTaGCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTC +
Preference number: 3 (lower is better)
Translates to: KDGEECASGGRP*LRHVGASLLLV
Trigger: GACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR-3UTR CAA 90 bp ATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTGCATGGCTCAGCTTCTTaGCAGGAGATTTCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: MGIGRPPPWVGDVCGDPVHGSAS*QEISKR
Trigger: CCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATG...CACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR GCA 72 bp ACGGGATGGAAGACATTCTCAACATGGGCAAGCCTGTaGATGAGAGGTAGCCAGACAAGGCACTGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: TGWKTFSTWASL*MRGSQTRHWGG
Trigger: TCCTCCCCAGTGCCTTGTCTGGCTACCTCTCATGCACAGGCTTGCCCATGTTGAGAATGTCTTCCATCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR CCA 72 bp GCAAGCCTGTGCATGAGAGGTAGCCAGACAAGGCACTaGGGAGGAGGGTCAGCCATCATTGTGTCTAAAAAC +
Preference number: 3 (lower is better)
Translates to: ASLCMRGSQTRH*GGGSAIIVSKN
Trigger: GTTTTTAGACACAATGATGGCTGACCCTCCTCCCCAGTGCCTTGTCTGGCTACCTCTCATGCACAGGCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398951.6
3UTR-3UTR CAA 90 bp CAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCTCCTGCACAAGTGGTTTCTCTGGTaGCTCAGGAAAAACAGGATG +
Preference number: 3 (lower is better)
Translates to: QQVIAEVSPRTLCEGLLHKWFLW*LRKNRM
Trigger: CATCCTGTTTTTCCTGAGCAACCAGAGAAACCACTT...GTGCAGGAGGCCTTCGCACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR CCA 72 bp AGGAGGCTATCAGCGCATGCTCATCGGCCAAGTGACTaGGTATATCCTGGCTATACTGTAACCTCTTGGTGG +
Preference number: 3 (lower is better)
Translates to: RRLSAHAHRPSD*VYPGYTVTSWW
Trigger: CCACCAAGAGGTTACAGTATAGCCAGGATATACCCAGTCACTTGGCCGATGAGCATGCGCTGATAGCCTCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398951.6
3UTR-3UTR CAA 90 bp ATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCTCTGCTCCAGTTCATCCTGTCTTTGTTGTTTGTaGGCATCAAAGTTAAAGCTC +
Preference number: 3 (lower is better)
Translates to: ISSRLLSCRADILCSSSSCLCCL*ASKLKL
Trigger: GAGCTTTAACTTTGATGCCAACAAACAACAAAGACA...GGATGAACTGGAGCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR-3UTR CAA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCGAGGGTCAGCCATCATaGTGTCTAAAAACATATTTA +
Preference number: 3 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSEGQPS*CLKTYL
Trigger: TAAATATGTTTTTAGACACAATGATGGCTGACCCTC...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398951.6
3UTR CCA 72 bp CAGAGGGCGAGGAGGAACTATATGTGCAAGGTCAAGTaGTTTCTCTGGTTGCTCAGGAAAAACAGGATGCGG +
Preference number: 3 (lower is better)
Translates to: QRARRNYMCKVK*FLWLLRKNRMR
Trigger: CCGCATCCTGTTTTTCCTGAGCAACCAGAGAAACCACTTGACCTTGCACATATAGTTCCTCCTCGCCCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR GCA 72 bp GGAACTATATGTGCAAGGTCAAGTGGTTTCTCTGGTTaGTCAGGAAAAACAGGATGCGGGGGTTCTCTCGTG +
Preference number: 3 (lower is better)
Translates to: GTICARSSGFSG*SGKTGCGGSLV
Trigger: CACGAGAGAACCCCCGCATCCTGTTTTTCCTGAGCAACCAGAGAAACCACTTGACCTTGCACATATAGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR CCA 72 bp AGGAGGAACTATATGTGCAAGGTCAAGTGGTTTCTCTaGTTGCTCAGGAAAAACAGGATGCGGGGGTTCTCT +
Preference number: 3 (lower is better)
Translates to: RRNYMCKVKWFL*LLRKNRMRGFS
Trigger: AGAGAACCCCCGCATCCTGTTTTTCCTGAGCAACCAGAGAAACCACTTGACCTTGCACATATAGTTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR TCA 90 bp GCTCTTCCAGCTGGACCATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCCCCAGCCCCCTCGGCTaGGGCAGCGGCAGCGCCTAC +
Preference number: 4 (lower is better)
Translates to: ALPAGPSAPACSPAGPTSPSPLG*GSGSAY
Trigger: GTAGGCGCTGCCGCTGCCTCAGCCGAGGGGGCTGGG...GGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGGTCCAGCTGGAAGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR TCA 90 bp GACGTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATCCCTGGCGGGTGGAGTaGCGTCTGGCAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: DVERTGMGIGRPPPWVGDPWRVE*RLAACK
Trigger: CTTGCAGGCTGCCAGACGTCACTCCACCCGCCAGGG...ATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp GGTGGAGCCGGCAGACGTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCGGGTGGAGTGACGTCTaGCAGCCTGCAAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: GGAGRRGAHWHGHWPAASGWSDV*QPASLV
Trigger: GACCAGGCTTGCAGGCTGCCAGACGTCACTCCACCC...GGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTCTGCCGGCTCCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR TCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTCCCAGCCCCCTCGGCTaGGGCAGCGGCAGCGCCTAC +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAPSPLG*GSGSAY
Trigger: GTAGGCGCTGCCGCTGCCTCAGCCGAGGGGGCTGGG...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTCCCAGCCCCCTCGGCTaGGGCAGCGGCAGCGCCTAC +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCPSPLG*GSGSAY
Trigger: GTAGGCGCTGCCGCTGCCTCAGCCGAGGGGGCTGGG...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTCCCAGCCCCCTCGGCTaGGGCAGCGGCAGCGCCTAC +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPPSPLG*GSGSAY
Trigger: GTAGGCGCTGCCGCTGCCTCAGCCGAGGGGGCTGGG...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGCCCAGCCCCCTCGGCTaGGGCAGCGGCAGCGCCTAC +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATPSPLG*GSGSAY
Trigger: GTAGGCGCTGCCGCTGCCTCAGCCGAGGGGGCTGGG...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGCTTCCCACCGGCTCTaGCTCCCCTCTCCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLASHRL*LPSPWR
Trigger: CCGCCAGGGAGAGGGGAGCCAGAGCCGGTGGGAAGC...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
3UTR CAA 72 bp TGGAGCCGGCAGACGTGGAGCGCACTGGCATGGGCATaGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTG +
Preference number: 4 (lower is better)
Translates to: WSRQTWSALAWA*AGRLHGWAMYV
Trigger: CACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTCTGCCGGCTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR TCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCCCCTGGCGGGTGGAGTaGCGTCTGGCAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLPWRVE*RLAACK
Trigger: CTTGCAGGCTGCCAGACGTCACTCCACCCGCCAGGG...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCCCGCTCAGCGAGTCCTaGGGACAGTGGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GEECASGGRPCLRHVGASPLSES*GQWVGV
Trigger: CACCCCCACCCACTGTCCGCAGGACTCGCTGAGCGG...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCCCGCTCAGCGAGTCCTaGGGACAGTGGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLPLSES*GQWVGV
Trigger: CACCCCCACCCACTGTCCGCAGGACTCGCTGAGCGG...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTAGGCCGCCTCCATGGGTaGGCGATGTATGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: VERTGMGIGRPPPWVGDVGRLHG*AMYVVT
Trigger: GGTCACCACATACATCGCCCACCCATGGAGGCGGCC...TACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp TCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCTCTGCTCCAGTTCATCCTCCTGCGGACAGTGGGTaGGGGTGGAGCCGGCAGACG +
Preference number: 4 (lower is better)
Translates to: SAPACSPAGPTSSAPVHPPADSG*GWSRQT
Trigger: CGTCTGCCGGCTCCACCCCCACCCACTGTCCGCAGG...AGGATGAACTGGAGCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCCTGCGGACAGTGGGTaGGGGTGGAGCCGGCAGACG +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQPADSG*GWSRQT
Trigger: CGTCTGCCGGCTCCACCCCCACCCACTGTCCGCAGG...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTCCTGCGGACAGTGGGTaGGGGTGGAGCCGGCAGACG +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAPADSG*GWSRQT
Trigger: CGTCTGCCGGCTCCACCCCCACCCACTGTCCGCAGG...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTCCTGCGGACAGTGGGTaGGGGTGGAGCCGGCAGACG +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPPADSG*GWSRQT
Trigger: CGTCTGCCGGCTCCACCCCCACCCACTGTCCGCAGG...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGCCTGCGGACAGTGGGTaGGGGTGGAGCCGGCAGACG +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATPADSG*GWSRQT
Trigger: CGTCTGCCGGCTCCACCCCCACCCACTGTCCGCAGG...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCGAGTCCTGCGGACAGTaGGTGGGGGTGGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: GEECASGGRPCLRHVGASESCGQ*VGVEPA
Trigger: TGCCGGCTCCACCCCCACCCACTGTCCGCAGGACTC...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCGAGTCCTGCGGACAGTaGGTGGGGGTGGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSESCGQ*VGVEPA
Trigger: TGCCGGCTCCACCCCCACCCACTGTCCGCAGGACTC...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCGCTTCCCACCGGCTCTaGCTCCCCTCTCCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGAASHRL*LPSPWR
Trigger: CCGCCAGGGAGAGGGGAGCCAGAGCCGGTGGGAAGC...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGCTTCCCACCGGCTCTaGCTCCCCTCTCCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAASHRL*LPSPWR
Trigger: CCGCCAGGGAGAGGGGAGCCAGAGCCGGTGGGAAGC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTGCTTCCCACCGGCTCTaGCTCCCCTCTCCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCASHRL*LPSPWR
Trigger: CCGCCAGGGAGAGGGGAGCCAGAGCCGGTGGGAAGC...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGCTTCCCACCGGCTCTaGCTCCCCTCTCCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPASHRL*LPSPWR
Trigger: CCGCCAGGGAGAGGGGAGCCAGAGCCGGTGGGAAGC...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCCCCTGGCGGGTGGAGTaGCGTCTGGCAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGAPWRVE*RLAACK
Trigger: CTTGCAGGCTGCCAGACGTCACTCCACCCGCCAGGG...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCCCTGGCGGGTGGAGTaGCGTCTGGCAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFPWRVE*RLAACK
Trigger: CTTGCAGGCTGCCAGACGTCACTCCACCCGCCAGGG...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTCCCTGGCGGGTGGAGTaGCGTCTGGCAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCPWRVE*RLAACK
Trigger: CTTGCAGGCTGCCAGACGTCACTCCACCCGCCAGGG...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCGTGGGCTGGGAGGCCTaGTCGTGTTCCAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSVGWEA*SCSRRR
Trigger: TCTCCGCCTGGAACACGAGCAGGCCTCCCAGCCCAC...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCCAGCAGCCGCAGCTCTaGCAGCAGCGTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLQQPQL*QQRGVL
Trigger: CAGAACCCCACGCTGCTGGCAGAGCTGCGGCTGCTG...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGCAGCAGCCGCAGCTCTaGCAGCAGCGTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLQQPQL*QQRGVL
Trigger: CAGAACCCCACGCTGCTGGCAGAGCTGCGGCTGCTG...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTCCCGCCTGCTCTCCTaGAGGGCCGACATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLSRLLS*RADILC
Trigger: GCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGA...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCTCCCGCCTGCTCTCCTaGAGGGCCGACATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLSRLLS*RADILC
Trigger: GCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGA...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTCCCGCCTGCTCTCCTaGAGGGCCGACATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLSRLLS*RADILC
Trigger: GCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGA...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGCCGCTCAGCGAGTCCTaGGGACAGTGGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATPLSES*GQWVGV
Trigger: CACCCCCACCCACTGTCCGCAGGACTCGCTGAGCGG...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GACGTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGGTGATGGAGTCAGCTaGCACCAGCAGGTCATTGCG +
Preference number: 4 (lower is better)
Translates to: DVERTGMGIGRPPPWVGDGDGVS*HQQVIA
Trigger: CGCAATGACCTGCTGGTGGCAGCTGACTCCATCACC...ATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp GTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTAATGTCGGCGCCAGCTTaGTCCTCGTCCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: VERTGMGIGRPPPWVGDVMSAPA*SSSSVP
Trigger: AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACAT...TACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTGCCTTCTCAGGGGTaGGCTGGGAGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLVPSQG*AGRPAR
Trigger: ACGAGCAGGCCTCCCAGCCCACCCCTGAGAAGGCAC...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCGTGCCTTCTCAGGGGTaGGCTGGGAGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: GEECASGGRPCLRHVGASVPSQG*AGRPAR
Trigger: ACGAGCAGGCCTCCCAGCCCACCCCTGAGAAGGCAC...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCGGCCGGCCGCCTCCATaGGTGGGCGATGTATGTGGT +
Preference number: 4 (lower is better)
Translates to: GEECASGGRPCLRHVGASGRPPP*VGDVCG
Trigger: ACCACATACATCGCCCACCCATGGAGGCGGCCGGCC...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCGGCCGGCCGCCTCCATaGGTGGGCGATGTATGTGGT +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSGRPPP*VGDVCG
Trigger: ACCACATACATCGCCCACCCATGGAGGCGGCCGGCC...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCCACTGGCATGGGCATTaGCCGGCCGCCTCCATGGGT +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLHWHGH*PAASMG
Trigger: ACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTG...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGCACTGGCATGGGCATTaGCCGGCCGCCTCCATGGGT +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLHWHGH*PAASMG
Trigger: ACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTG...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTTGGAGCGCACTGGCATaGGCATTGGCCGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELWSALA*ALAGRL
Trigger: GAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCA...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCTGGAGCGCACTGGCATaGGCATTGGCCGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGAWSALA*ALAGRL
Trigger: GAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCA...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCAGACGTGGAGCGCACTaGCATGGGCATTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSRRGAH*HGHWPA
Trigger: GGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTCT...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCAGACGTGGAGCGCACTaGCATGGGCATTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLRRGAH*HGHWPA
Trigger: GGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTCT...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTGTGGAGCCGGCAGACGTaGAGCGCACTGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: MGIGRPPPWVGDVCGDPVWSRQT*SALAWA
Trigger: TGCCCATGCCAGTGCGCTCCACGTCTGCCGGCTCCA...CACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTCCTGCGGACAGTGGGTaGGGGTGGAGCCGGCAGACG +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTPADSG*GWSRQT
Trigger: CGTCTGCCGGCTCCACCCCCACCCACTGTCCGCAGG...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCCCTGCGGACAGTGGGTaGGGGTGGAGCCGGCAGACG +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSPADSG*GWSRQT
Trigger: CGTCTGCCGGCTCCACCCCCACCCACTGTCCGCAGG...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCGAGTCCTGCGGACAGTaGGTGGGGGTGGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGAESCGQ*VGVEPA
Trigger: TGCCGGCTCCACCCCCACCCACTGTCCGCAGGACTC...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTTCCCACCGGCTCTaGCTCCCCTCTCCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLASHRL*LPSPWR
Trigger: CCGCCAGGGAGAGGGGAGCCAGAGCCGGTGGGAAGC...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCCTCGTCCTCTGTGCCTaGGCTTCCTCTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLLVLCA*ASSVSG
Trigger: GCCGGACACAGAGGAAGCTCAGGCACAGAGGACGAG...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTCCCTGGCGGGTGGAGTaGCGTCTGGCAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTPWRVE*RLAACK
Trigger: CTTGCAGGCTGCCAGACGTCACTCCACCCGCCAGGG...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTCCCTGGCGGGTGGAGTaGCGTCTGGCAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLPWRVE*RLAACK
Trigger: CTTGCAGGCTGCCAGACGTCACTCCACCCGCCAGGG...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGGTCGGGAAGGTCTCCTaGGGCCTCACTCCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQVGKVS*GLTPPH
Trigger: GTGCGGAGGAGTGAGGCCGCAGGAGACCTTCCCGAC...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCTCTGCTCCAGTTCATCCGTCGGGAAGGTCTCCTaGGGCCTCACTCCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: ISSRLLSCRADILCSSSSVGKVS*GLTPPH
Trigger: GTGCGGAGGAGTGAGGCCGCAGGAGACCTTCCCGAC...GGATGAACTGGAGCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGGTCGGGAAGGTCTCCTaGGGCCTCACTCCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATVGKVS*GLTPPH
Trigger: GTGCGGAGGAGTGAGGCCGCAGGAGACCTTCCCGAC...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGTGGGCTGGGAGGCCTaGTCGTGTTCCAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPVGWEA*SCSRRR
Trigger: TCTCCGCCTGGAACACGAGCAGGCCTCCCAGCCCAC...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCGTGGGCTGGGAGGCCTaGTCGTGTTCCAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLVGWEA*SCSRRR
Trigger: TCTCCGCCTGGAACACGAGCAGGCCTCCCAGCCCAC...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGTGGGCTGGGAGGCCTaGTCGTGTTCCAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAVGWEA*SCSRRR
Trigger: TCTCCGCCTGGAACACGAGCAGGCCTCCCAGCCCAC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTCAGCAGCCGCAGCTCTaGCAGCAGCGTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPQQPQL*QQRGVL
Trigger: CAGAACCCCACGCTGCTGGCAGAGCTGCGGCTGCTG...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCAGCAGCCGCAGCTCTaGCAGCAGCGTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFQQPQL*QQRGVL
Trigger: CAGAACCCCACGCTGCTGGCAGAGCTGCGGCTGCTG...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCCAGCAGCCGCAGCTCTaGCAGCAGCGTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGAQQPQL*QQRGVL
Trigger: CAGAACCCCACGCTGCTGGCAGAGCTGCGGCTGCTG...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTCAGCAGCCGCAGCTCTaGCAGCAGCGTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCQQPQL*QQRGVL
Trigger: CAGAACCCCACGCTGCTGGCAGAGCTGCGGCTGCTG...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCAGCAGCCGCAGCTCTaGCAGCAGCGTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQQQPQL*QQRGVL
Trigger: CAGAACCCCACGCTGCTGGCAGAGCTGCGGCTGCTG...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTTCCCGCCTGCTCTCCTaGAGGGCCGACATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCSRLLS*RADILC
Trigger: GCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGA...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTCCCGCCTGCTCTCCTaGAGGGCCGACATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPASRLLS*RADILC
Trigger: GCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGA...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGTCCCGCCTGCTCTCCTaGAGGGCCGACATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQSRLLS*RADILC
Trigger: GCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGA...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTCCATCAGCTCCCGCCTaGTCTCCTGCAGGGCCGACA +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCPSAPA*SPAGPT
Trigger: TGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGG...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTCCATCAGCTCCCGCCTaGTCTCCTGCAGGGCCGACA +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPPSAPA*SPAGPT
Trigger: TGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGG...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCCATCAGCTCCCGCCTaGTCTCCTGCAGGGCCGACA +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQPSAPA*SPAGPT
Trigger: TGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGG...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCCGCTCAGCGAGTCCTaGGGACAGTGGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRPLSES*GQWVGV
Trigger: CACCCCCACCCACTGTCCGCAGGACTCGCTGAGCGG...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTCCGCTCAGCGAGTCCTaGGGACAGTGGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTPLSES*GQWVGV
Trigger: CACCCCCACCCACTGTCCGCAGGACTCGCTGAGCGG...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGTGTGCGAAGGCCTCCTaGACGTCTCCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQCAKAS*TSPPTP
Trigger: CGGAGTCGGGGGAGACGTGCAGGAGGCCTTCGCACA...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTTGTGCGAAGGCCTCCTaGACGTCTCCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPCAKAS*TSPPTP
Trigger: CGGAGTCGGGGGAGACGTGCAGGAGGCCTTCGCACA...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGTGCGAAGGCCTCCTaGACGTCTCCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPACAKAS*TSPPTP
Trigger: CGGAGTCGGGGGAGACGTGCAGGAGGCCTTCGCACA...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GCTCTTCCAGCTGGACCATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCATGTCGGCGCCAGCTTaGTCCTCGTCCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: ALPAGPSAPACSPAGPTSMSAPA*SSSSVP
Trigger: AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACAT...GGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGGTCCAGCTGGAAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTCTCAGGGGTGGGCTaGGAGGCCTGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: GEECASGGRPCLRHVGASFSGVG*EACSCS
Trigger: GGAACACGAGCAGGCCTCCCAGCCCACCCCTGAGAA...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCGTGCCTTCTCAGGGGTaGGCTGGGAGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGAVPSQG*AGRPAR
Trigger: ACGAGCAGGCCTCCCAGCCCACCCCTGAGAAGGCAC...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTGTGCCTTCTCAGGGGTaGGCTGGGAGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELVPSQG*AGRPAR
Trigger: ACGAGCAGGCCTCCCAGCCCACCCCTGAGAAGGCAC...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGGGCCGCCTCCATGGGTaGGCGATGTATGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLGRLHG*AMYVVT
Trigger: GGTCACCACATACATCGCCCACCCATGGAGGCGGCC...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCGGCCGCCTCCATGGGTaGGCGATGTATGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSGRLHG*AMYVVT
Trigger: GGTCACCACATACATCGCCCACCCATGGAGGCGGCC...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGGCCGGCCGCCTCCATaGGTGGGCGATGTATGTGGT +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPGRPPP*VGDVCG
Trigger: ACCACATACATCGCCCACCCATGGAGGCGGCCGGCC...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTGGCCGGCCGCCTCCATaGGTGGGCGATGTATGTGGT +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCGRPPP*VGDVCG
Trigger: ACCACATACATCGCCCACCCATGGAGGCGGCCGGCC...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGGCCGGCCGCCTCCATaGGTGGGCGATGTATGTGGT +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAGRPPP*VGDVCG
Trigger: ACCACATACATCGCCCACCCATGGAGGCGGCCGGCC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTCACTGGCATGGGCATTaGCCGGCCGCCTCCATGGGT +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAHWHGH*PAASMG
Trigger: ACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTG...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGCACTGGCATGGGCATTaGCCGGCCGCCTCCATGGGT +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATHWHGH*PAASMG
Trigger: ACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTG...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTCACTGGCATGGGCATTaGCCGGCCGCCTCCATGGGT +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCHWHGH*PAASMG
Trigger: ACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTG...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCACTGGCATGGGCATTaGCCGGCCGCCTCCATGGGT +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFHWHGH*PAASMG
Trigger: ACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTG...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTCACTGGCATGGGCATTaGCCGGCCGCCTCCATGGGT +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPHWHGH*PAASMG
Trigger: ACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTG...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCTGGAGCGCACTGGCATaGGCATTGGCCGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRWSALA*ALAGRL
Trigger: GAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCA...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTAGACGTGGAGCGCACTaGCATGGGCATTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPRRGAH*HGHWPA
Trigger: GGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTCT...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTAGACGTGGAGCGCACTaGCATGGGCATTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELRRGAH*HGHWPA
Trigger: GGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTCT...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGAGACGTGGAGCGCACTaGCATGGGCATTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQRRGAH*HGHWPA
Trigger: GGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTCT...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGGAGCCGGCAGACGTaGAGCGCACTGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAWSRQT*SALAWA
Trigger: TGCCCATGCCAGTGCGCTCCACGTCTGCCGGCTCCA...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTTGGAGCCGGCAGACGTaGAGCGCACTGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELWSRQT*SALAWA
Trigger: TGCCCATGCCAGTGCGCTCCACGTCTGCCGGCTCCA...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTGAGTCCTGCGGACAGTaGGTGGGGGTGGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTESCGQ*VGVEPA
Trigger: TGCCGGCTCCACCCCCACCCACTGTCCGCAGGACTC...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGAGTCCTGCGGACAGTaGGTGGGGGTGGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLESCGQ*VGVEPA
Trigger: TGCCGGCTCCACCCCCACCCACTGTCCGCAGGACTC...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACGGGTGGAGTGACGTCTaGCAGCCTGCAAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: TGMGIGRPPPWVGDVCGDGWSDV*QPASLV
Trigger: GACCAGGCTTGCAGGCTGCCAGACGTCACTCCACCC...GTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCCTCTCCCTGGCGGGTaGAGTGACGTCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFPLPGG*SDVWQP
Trigger: AGGCTGCCAGACGTCACTCCACCCGCCAGGGAGAGG...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCCTCTCCCTGGCGGGTaGAGTGACGTCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQPLPGG*SDVWQP
Trigger: AGGCTGCCAGACGTCACTCCACCCGCCAGGGAGAGG...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp ACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCGAGGCGGGACACACTaGTCTCGGTGGTATGGTCCA +
Preference number: 4 (lower is better)
Translates to: TGMGIGRPPPWVGDVCGDRGGTH*SRWYGP
Trigger: TGGACCATACCACCGAGATCAGTGTGTCCCGCCTCG...GTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398951.6
CDS-3UTR TCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCCGAGGCGGGACACACTaGTCTCGGTGGTATGGTCCA +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLRGGTH*SRWYGP
Trigger: TGGACCATACCACCGAGATCAGTGTGTCCCGCCTCG...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp ATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTGGGGCAAGCCTGTGCATaGGAGGTAGCCAGACAAGGC +
Preference number: 4 (lower is better)
Translates to: MGIGRPPPWVGDVCGDPVGQACA*EVARQG
Trigger: GCCTTGTCTGGCTACCTCTCATGCACAGGCTTGCCC...CACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR TCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGGGGCAAGCCTGTGCATaGGAGGTAGCCAGACAAGGC +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLGQACA*EVARQG
Trigger: GCCTTGTCTGGCTACCTCTCATGCACAGGCTTGCCC...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCGGGCGATGTATGTGGTaGCCCTGTGGCCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSGRCMW*PCGLSL
Trigger: AAGGCTCAGGCCACAGGGTCACCACATACATCGCCC...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000405222.5
ENST00000407186.5
CDS-3UTR TCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGGGCGATGTATGTGGTaGCCCTGTGGCCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLGRCMW*PCGLSL
Trigger: AAGGCTCAGGCCACAGGGTCACCACATACATCGCCC...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000405222.5
ENST00000407186.5
CDS-3UTR TCA 90 bp GACGTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATCTCCTTCACCAGGGATaGCATGGTGTTGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: DVERTGMGIGRPPPWVGDLLHQG*HGVGDG
Trigger: TCCATCACCAACACCATGTCATCCCTGGTGAAGGAG...ATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR TCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTCTCGTCCTCTGTGCCTaGGCTTCCTCTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPLVLCA*ASSVSG
Trigger: GCCGGACACAGAGGAAGCTCAGGCACAGAGGACGAG...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTCGTCCTCTGTGCCTaGGCTTCCTCTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQLVLCA*ASSVSG
Trigger: GCCGGACACAGAGGAAGCTCAGGCACAGAGGACGAG...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGGGCGATGTATGTGGTaGCCCTGTGGCCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAGRCMW*PCGLSC
Trigger: GCAGCTCAGGCCACAGGGTCACCACATACATCGCCC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
CDS-3UTR GCA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTCATCTGGTGCTGGTTaGTGTGAGGGCCGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: GEECASGGRPCLRHVGASSSGAG*CEGRRH
Trigger: ATGCCGGCGGCCCTCACAGCAACCAGCACCAGATGA...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGACGAGTCACGTTTCCTaGTTCTGCAGCCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLTSHVS*FCSQPG
Trigger: GCCCGGCTGGCTGCAGAAGCAGGAAACGTGACTCGT...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTGTGGGCTGGGAGGCCTaGTCGTGTTCCAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTVGWEA*SCSRRR
Trigger: TCTCCGCCTGGAACACGAGCAGGCCTCCCAGCCCAC...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCGTGGGCTGGGAGGCCTaGTCGTGTTCCAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRVGWEA*SCSRRR
Trigger: TCTCCGCCTGGAACACGAGCAGGCCTCCCAGCCCAC...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGTGGGCTGGGAGGCCTaGTCGTGTTCCAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPVGWEA*SCSRRR
Trigger: TCTCCGCCTGGAACACGAGCAGGCCTCCCAGCCCAC...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCATCCCGCCTGCTCTCCTaGAGGGCCGACATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPSRLLS*RADILC
Trigger: GCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGA...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTCCATCAGCTCCCGCCTaGTCTCCTGCAGGGCCGACA +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTPSAPA*SPAGPT
Trigger: TGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGG...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCCCATCAGCTCCCGCCTaGTCTCCTGCAGGGCCGACA +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSPSAPA*SPAGPT
Trigger: TGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGG...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTTGTGCGAAGGCCTCCTaGACGTCTCCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLCAKAS*TSPPTP
Trigger: CGGAGTCGGGGGAGACGTGCAGGAGGCCTTCGCACA...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCATGTGCGAAGGCCTCCTaGACGTCTCCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPCAKAS*TSPPTP
Trigger: CGGAGTCGGGGGAGACGTGCAGGAGGCCTTCGCACA...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCTGTGCGAAGGCCTCCTaGACGTCTCCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRCAKAS*TSPPTP
Trigger: CGGAGTCGGGGGAGACGTGCAGGAGGCCTTCGCACA...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGATGTCGGCGCCAGCTTaGTCCTCGTCCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLMSAPA*SSSSVP
Trigger: AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACAT...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGTCTGGGGGAAGACCTTaGCTTCGCCATGTCGGCGCC +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATSGGRP*LRHVGA
Trigger: GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTTCTGGGGGAAGACCTTaGCTTCGCCATGTCGGCGCC +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELSGGRP*LRHVGA
Trigger: GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGTCTGGGGGAAGACCTTaGCTTCGCCATGTCGGCGCC +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQSGGRP*LRHVGA
Trigger: GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCTCTGGGGGAAGACCTTaGCTTCGCCATGTCGGCGCC +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGASGGRP*LRHVGA
Trigger: GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCTCTGGGGGAAGACCTTaGCTTCGCCATGTCGGCGCC +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLSGGRP*LRHVGA
Trigger: GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GACGTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATAGATGGAGAGGAATGTaGCTCTGGGGGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: DVERTGMGIGRPPPWVGDRWRGM*LWGKTL
Trigger: CAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT...ATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCAGCCAGACAAGGCACTaGGGAGGAGGGTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: GEECASGGRPCLRHVGASSQTRH*GGGSAI
Trigger: GATGGCTGACCCTCCTCCCCAGTGCCTTGTCTGGCT...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTTTCTCAGGGGTGGGCTaGGAGGCCTGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELFSGVG*EACSCS
Trigger: GGAACACGAGCAGGCCTCCCAGCCCACCCCTGAGAA...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTTTCTCAGGGGTGGGCTaGGAGGCCTGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPFSGVG*EACSCS
Trigger: GGAACACGAGCAGGCCTCCCAGCCCACCCCTGAGAA...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCGTGCCTTCTCAGGGGTaGGCTGGGAGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRVPSQG*AGRPAR
Trigger: ACGAGCAGGCCTCCCAGCCCACCCCTGAGAAGGCAC...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTGTGCCTTCTCAGGGGTaGGCTGGGAGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTVPSQG*AGRPAR
Trigger: ACGAGCAGGCCTCCCAGCCCACCCCTGAGAAGGCAC...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCGGCCGCCTCCATGGGTaGGCGATGTATGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLGRLHG*AMYVVT
Trigger: GGTCACCACATACATCGCCCACCCATGGAGGCGGCC...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCGGCCGGCCGCCTCCATaGGTGGGCGATGTATGTGGT +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRGRPPP*VGDVCG
Trigger: ACCACATACATCGCCCACCCATGGAGGCGGCCGGCC...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCATGGAGCCGGCAGACGTaGAGCGCACTGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPWSRQT*SALAWA
Trigger: TGCCCATGCCAGTGCGCTCCACGTCTGCCGGCTCCA...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGGAGCCGGCAGACGTaGAGCGCACTGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSWSRQT*SALAWA
Trigger: TGCCCATGCCAGTGCGCTCCACGTCTGCCGGCTCCA...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTTGGAGCCGGCAGACGTaGAGCGCACTGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLWSRQT*SALAWA
Trigger: TGCCCATGCCAGTGCGCTCCACGTCTGCCGGCTCCA...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGCCTGCGGACAGTGGGTaGGGGTGGAGCCGGCAGACG +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSPADSG*GWSRQT
Trigger: CGTCTGCCGGCTCCACCCCCACCCACTGTCCGCAGG...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGGCAGCCTGCAAGCCTaGTCCAGGTGTGCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAGSLQA*SRCAVE
Trigger: TTCCACCGCACACCTGGACCAGGCTTGCAGGCTGCC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTGGCAGCCTGCAAGCCTaGTCCAGGTGTGCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELGSLQA*SRCAVE
Trigger: TTCCACCGCACACCTGGACCAGGCTTGCAGGCTGCC...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCGGCAGCCTGCAAGCCTaGTCCAGGTGTGCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGAGSLQA*SRCAVE
Trigger: TTCCACCGCACACCTGGACCAGGCTTGCAGGCTGCC...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGGGCAGCCTGCAAGCCTaGTCCAGGTGTGCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATGSLQA*SRCAVE
Trigger: TTCCACCGCACACCTGGACCAGGCTTGCAGGCTGCC...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTGGGTGGAGTGACGTCTaGCAGCCTGCAAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCGWSDV*QPASLV
Trigger: GACCAGGCTTGCAGGCTGCCAGACGTCACTCCACCC...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGGGTGGAGTGACGTCTaGCAGCCTGCAAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAGWSDV*QPASLV
Trigger: GACCAGGCTTGCAGGCTGCCAGACGTCACTCCACCC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGGGTGGAGTGACGTCTaGCAGCCTGCAAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPGWSDV*QPASLV
Trigger: GACCAGGCTTGCAGGCTGCCAGACGTCACTCCACCC...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGGGGTGGAGTGACGTCTaGCAGCCTGCAAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQGWSDV*QPASLV
Trigger: GACCAGGCTTGCAGGCTGCCAGACGTCACTCCACCC...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTGGGTGGAGTGACGTCTaGCAGCCTGCAAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELGWSDV*QPASLV
Trigger: GACCAGGCTTGCAGGCTGCCAGACGTCACTCCACCC...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCACCTCTCCCTGGCGGGTaGAGTGACGTCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPPLPGG*SDVWQP
Trigger: AGGCTGCCAGACGTCACTCCACCCGCCAGGGAGAGG...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTCCTCTCCCTGGCGGGTaGAGTGACGTCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTPLPGG*SDVWQP
Trigger: AGGCTGCCAGACGTCACTCCACCCGCCAGGGAGAGG...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCGAGGCGGGACACACTaGTCTCGGTGGTATGGTCCA +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFRGGTH*SRWYGP
Trigger: TGGACCATACCACCGAGATCAGTGTGTCCCGCCTCG...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCCGAGGCGGGACACACTaGTCTCGGTGGTATGGTCCA +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGARGGTH*SRWYGP
Trigger: TGGACCATACCACCGAGATCAGTGTGTCCCGCCTCG...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGGGCAAGCCTGTGCATaGGAGGTAGCCAGACAAGGC +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAGQACA*EVARQG
Trigger: GCCTTGTCTGGCTACCTCTCATGCACAGGCTTGCCC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp ATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTGTCCAGGCGGAGACGCTaGATCTCCTGCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: MGIGRPPPWVGDVCGDPVSRRRR*ISCRIS
Trigger: AGAGATCCTGCAGGAGATTCAGCGTCTCCGCCTGGA...CACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR TCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGGGGCGATGTATGTGGTaGCCCTGTGGCCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATGRCMW*PCGLSL
Trigger: AAGGCTCAGGCCACAGGGTCACCACATACATCGCCC...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000405222.5
ENST00000407186.5
CDS-3UTR TCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGGGGCGATGTATGTGGTaGCCCTGTGGCCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQGRCMW*PCGLSL
Trigger: AAGGCTCAGGCCACAGGGTCACCACATACATCGCCC...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000405222.5
ENST00000407186.5
CDS-3UTR TCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTCTCGTCCTCTGTGCCTaGGCTTCCTCTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLLVLCA*ASSVSG
Trigger: GCCGGACACAGAGGAAGCTCAGGCACAGAGGACGAG...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCGGTGACCCTGTGGCCTaGGCTGCCTGCTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLGDPVA*AACFCS
Trigger: AGAGCAAAAGCAGGCAGCTCAGGCCACAGGGTCACC...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
CDS-3UTR TCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGGGTGACCCTGTGGCCTaGGCTGCCTGCTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQGDPVA*AACFCS
Trigger: AGAGCAAAAGCAGGCAGCTCAGGCCACAGGGTCACC...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
CDS-3UTR TCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGGTGACCCTGTGGCCTaGGCTGCCTGCTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPGDPVA*AACFCS
Trigger: AGAGCAAAAGCAGGCAGCTCAGGCCACAGGGTCACC...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
CDS-3UTR TCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGGGCGATGTATGTGGTaGCCCTGTGGCCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPGRCMW*PCGLSC
Trigger: GCAGCTCAGGCCACAGGGTCACCACATACATCGCCC...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
CDS-3UTR TCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCGGGCGATGTATGTGGTaGCCCTGTGGCCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSGRCMW*PCGLSC
Trigger: GCAGCTCAGGCCACAGGGTCACCACATACATCGCCC...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
CDS-3UTR TCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGGGCGATGTATGTGGTaGCCCTGTGGCCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLGRCMW*PCGLSC
Trigger: GCAGCTCAGGCCACAGGGTCACCACATACATCGCCC...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
CDS-3UTR GCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTCATCTGGTGCTGGTTaGTGTGAGGGCCGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPASSGAG*CEGRRH
Trigger: ATGCCGGCGGCCCTCACAGCAACCAGCACCAGATGA...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCTCATCTGGTGCTGGTTaGTGTGAGGGCCGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFSSGAG*CEGRRH
Trigger: ATGCCGGCGGCCCTCACAGCAACCAGCACCAGATGA...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGTCATCTGGTGCTGGTTaGTGTGAGGGCCGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATSSGAG*CEGRRH
Trigger: ATGCCGGCGGCCCTCACAGCAACCAGCACCAGATGA...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGTCATCTGGTGCTGGTTaGTGTGAGGGCCGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQSSGAG*CEGRRH
Trigger: ATGCCGGCGGCCCTCACAGCAACCAGCACCAGATGA...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCACTGTCCAGAACACGTaGACAGTGCTGCAGACGGGC +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSTVQNT*TVLQTG
Trigger: GCCCGTCTGCAGCACTGTGCACGTGTTCTGGACAGT...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR GCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTACGAGTCACGTTTCCTaGTTCTGCAGCCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELTSHVS*FCSQPG
Trigger: GCCCGGCTGGCTGCAGAAGCAGGAAACGTGACTCGT...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGGTGGGCTGGGAGGCCTaGTCGTGTTCCAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAVGWEA*SCSRRR
Trigger: TCTCCGCCTGGAACACGAGCAGGCCTCCCAGCCCAC...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCATCAGCTCCCGCCTaGTCTCCTGCAGGGCCGACA +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAPSAPA*SPAGPT
Trigger: TGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGG...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TCTGGTTGCTCAGGAAAAACAGGATGCGGGGGTTCTCTCGTGGGTACACACCCCCCGCTCAGCGAGTCCTaGGGACAGTGGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SGCSGKTGCGGSLVGTHPPLSES*GQWVGV
Trigger: CACCCCCACCCACTGTCCGCAGGACTCGCTGAGCGG...GGGGTGTGTACCCACGAGAGAACCCCCGCATCCTGTTTTTCCTGAGCAACCAGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTCTCCTCGTACCTTGTaGGAAGGCCTCCTGCACGTC +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLSPRTL*EGLLHV
Trigger: GACGTGCAGGAGGCCTTCGCACAAGGTACGAGGAGA...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGGGTGATGGAGTCAGCTaGCACCAGCAGGTCATTGCG +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLGDGVS*HQQVIA
Trigger: CGCAATGACCTGCTGGTGGCAGCTGACTCCATCACC...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCGGTGATGGAGTCAGCTaGCACCAGCAGGTCATTGCG +
Preference number: 4 (lower is better)
Translates to: GEECASGGRPCLRHVGASGDGVS*HQQVIA
Trigger: CGCAATGACCTGCTGGTGGCAGCTGACTCCATCACC...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGATGTCGGCGCCAGCTTaGTCCTCGTCCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQMSAPA*SSSSVP
Trigger: AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACAT...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCATGTCGGCGCCAGCTTaGTCCTCGTCCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFMSAPA*SSSSVP
Trigger: AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACAT...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTATGTCGGCGCCAGCTTaGTCCTCGTCCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCMSAPA*SSSSVP
Trigger: AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACAT...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGATGTCGGCGCCAGCTTaGTCCTCGTCCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATMSAPA*SSSSVP
Trigger: AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACAT...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTCTGGGGGAAGACCTTaGCTTCGCCATGTCGGCGCC +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSSGGRP*LRHVGA
Trigger: GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTAGCCAGACAAGGCACTaGGGAGGAGGGTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPASQTRH*GGGSAI
Trigger: GATGGCTGACCCTCCTCCCCAGTGCCTTGTCTGGCT...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGAGCCAGACAAGGCACTaGGGAGGAGGGTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQSQTRH*GGGSAI
Trigger: GATGGCTGACCCTCCTCCCCAGTGCCTTGTCTGGCT...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCAGCCAGACAAGGCACTaGGGAGGAGGGTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFSQTRH*GGGSAI
Trigger: GATGGCTGACCCTCCTCCCCAGTGCCTTGTCTGGCT...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTTCTCAGGGGTGGGCTaGGAGGCCTGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSFSGVG*EACSCS
Trigger: GGAACACGAGCAGGCCTCCCAGCCCACCCCTGAGAA...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCATTCTCAGGGGTGGGCTaGGAGGCCTGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPFSGVG*EACSCS
Trigger: GGAACACGAGCAGGCCTCCCAGCCCACCCCTGAGAA...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGGCCGCCTCCATGGGTaGGCGATGTATGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPGRLHG*AMYVVT
Trigger: GGTCACCACATACATCGCCCACCCATGGAGGCGGCC...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCGGCCGCCTCCATGGGTaGGCGATGTATGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSGRLHG*AMYVVT
Trigger: GGTCACCACATACATCGCCCACCCATGGAGGCGGCC...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGTGGAGCGCACTGGCATaGGCATTGGCCGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQWSALA*ALAGRL
Trigger: GAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCA...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGAGACGTGGAGCGCACTaGCATGGGCATTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSARRGAH*HGHWPA
Trigger: GGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTCT...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGAGTCCTGCGGACAGTaGGTGGGGGTGGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQESCGQ*VGVEPA
Trigger: TGCCGGCTCCACCCCCACCCACTGTCCGCAGGACTC...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTGGCAGCCTGCAAGCCTaGTCCAGGTGTGCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTGSLQA*SRCAVE
Trigger: TTCCACCGCACACCTGGACCAGGCTTGCAGGCTGCC...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCGGCAGCCTGCAAGCCTaGTCCAGGTGTGCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRGSLQA*SRCAVE
Trigger: TTCCACCGCACACCTGGACCAGGCTTGCAGGCTGCC...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCGGGTGGAGTGACGTCTaGCAGCCTGCAAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRGWSDV*QPASLV
Trigger: GACCAGGCTTGCAGGCTGCCAGACGTCACTCCACCC...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCTCTCCCTGGCGGGTaGAGTGACGTCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAPLPGG*SDVWQP
Trigger: AGGCTGCCAGACGTCACTCCACCCGCCAGGGAGAGG...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGGCTTCCCACCGGCTCTaGCTCCCCTCTCCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVASHRL*LPSPWR
Trigger: CCGCCAGGGAGAGGGGAGCCAGAGCCGGTGGGAAGC...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGCTTCCCACCGGCTCTaGCTCCCCTCTCCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRAASHRL*LPSPWR
Trigger: CCGCCAGGGAGAGGGGAGCCAGAGCCGGTGGGAAGC...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGCCAGAACACTCTTGGTaGGAGTGGGCACTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLPEHSW*EWALQR
Trigger: CCTCTGGAGTGCCCACTCCCACCAAGAGTGTTCTGG...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356599.9
ENST00000405222.5
ENST00000407038.7
ENST00000407186.5
CDS-3UTR TCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCGAGGCGGGACACACTaGTCTCGGTGGTATGGTCCA +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRRGGTH*SRWYGP
Trigger: TGGACCATACCACCGAGATCAGTGTGTCCCGCCTCG...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp CAGCTGGACCATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCTCTGCTCAGTAGATGGAGGAGATaGCAGTTTCGAGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: QLDHQLPPALLQGRHPLLSRWRR*QFRGGT
Trigger: TGTCCCGCCTCGAAACTGTCATCTCCTCCATCTACT...GAGCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGGTCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398951.6
CDS-3UTR TCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCGGGCAAGCCTGTGCATaGGAGGTAGCCAGACAAGGC +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRGQACA*EVARQG
Trigger: GCCTTGTCTGGCTACCTCTCATGCACAGGCTTGCCC...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTTCCAGGCGGAGACGCTaGATCTCCTGCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELSRRRR*ISCRIS
Trigger: AGAGATCCTGCAGGAGATTCAGCGTCTCCGCCTGGA...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCTCCAGGCGGAGACGCTaGATCTCCTGCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFSRRRR*ISCRIS
Trigger: AGAGATCCTGCAGGAGATTCAGCGTCTCCGCCTGGA...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGTCCAGGCGGAGACGCTaGATCTCCTGCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATSRRRR*ISCRIS
Trigger: AGAGATCCTGCAGGAGATTCAGCGTCTCCGCCTGGA...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCGGGCGATGTATGTGGTaGCCCTGTGGCCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRGRCMW*PCGLSL
Trigger: AAGGCTCAGGCCACAGGGTCACCACATACATCGCCC...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000405222.5
ENST00000407186.5
CDS-3UTR TCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCACCTTCCTCTGCTaGATGGAGCTCCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLCTFLC*MELLHQ
Trigger: CTGGTGAAGGAGCTCCATTCAGCAGAGGAAGGTGCA...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288642.12
ENST00000406818.7
ENST00000407186.5
CDS-3UTR GCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGTCGGGAAGGTCTCCTaGGGCCTCACTCCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSVGKVS*GLTPPH
Trigger: GTGCGGAGGAGTGAGGCCGCAGGAGACCTTCCCGAC...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCAATCATCCTTaGTCACTTCCCCGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSFLNHP*SLPRRS
Trigger: GCTCCGGCGGGGAAGTGAGCAAGGATGATTGAGGAA...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCTCATCTGGTGCTGGTTaGTGTGAGGGCCGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRSSGAG*CEGRRH
Trigger: ATGCCGGCGGCCCTCACAGCAACCAGCACCAGATGA...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTTCATCTGGTGCTGGTTaGTGTGAGGGCCGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTSSGAG*CEGRRH
Trigger: ATGCCGGCGGCCCTCACAGCAACCAGCACCAGATGA...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTACGAGTCACGTTTCCTaGTTCTGCAGCCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLTSHVS*FCSQPG
Trigger: GCCCGGCTGGCTGCAGAAGCAGGAAACGTGACTCGT...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCCGCTCAGCGAGTCCTaGGGACAGTGGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVPLSES*GQWVGV
Trigger: CACCCCCACCCACTGTCCGCAGGACTCGCTGAGCGG...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTTCTCCTCGTACCTTGTaGGAAGGCCTCCTGCACGTC +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELSPRTL*EGLLHV
Trigger: GACGTGCAGGAGGCCTTCGCACAAGGTACGAGGAGA...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTGCCACCAGCAGGTCATTaGGGAGGTTTCTCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: MGIGRPPPWVGDVCGDPVPPAGH*GGFSSY
Trigger: GTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGG...CACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCCCACCAGCAGGTCATTaGGGAGGTTTCTCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: GEECASGGRPCLRHVGASPPAGH*GGFSSY
Trigger: GTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGG...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGCCACCAGCAGGTCATTaGGGAGGTTTCTCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLPPAGH*GGFSSY
Trigger: GTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGG...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGGTGATGGAGTCAGCTaGCACCAGCAGGTCATTGCG +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAGDGVS*HQQVIA
Trigger: CGCAATGACCTGCTGGTGGCAGCTGACTCCATCACC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAATGTCGGCGCCAGCTTaGTCCTCGTCCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPMSAPA*SSSSVP
Trigger: AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACAT...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCAGCCTGGTCCAGGTGTaGGGTGGAAAGATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLSLVQV*GGKMER
Trigger: CCTCTCCATCTTTCCACCGCACACCTGGACCAGGCT...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCCTGGTCCAGGTGTaGGGTGGAAAGATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGASLVQV*GGKMER
Trigger: CCTCTCCATCTTTCCACCGCACACCTGGACCAGGCT...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCGCGGAGATGAGACCATaGCCTGAGGGGAGTGATGAA +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSAEMRP*PEGSDE
Trigger: TTCATCACTCCCCTCAGGGCATGGTCTCATCTCCGC...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCACCTTCCTCTGCTTGTaGGAAGGCCTCCTGCACGTC +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGATFLCL*EGLLHV
Trigger: GACGTGCAGGAGGCCTTCGCACAAGCAGAGGAAGGT...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404103.7
ENST00000405222.5
ENST00000407038.7
CDS-3UTR GCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTACCTTCCTCTGCTTGTaGGAAGGCCTCCTGCACGTC +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCTFLCL*EGLLHV
Trigger: GACGTGCAGGAGGCCTTCGCACAAGCAGAGGAAGGT...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404103.7
ENST00000405222.5
ENST00000407038.7
CDS-3UTR GCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTACCTTCCTCTGCTTGTaGGAAGGCCTCCTGCACGTC +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELTFLCL*EGLLHV
Trigger: GACGTGCAGGAGGCCTTCGCACAAGCAGAGGAAGGT...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404103.7
ENST00000405222.5
ENST00000407038.7
CDS-3UTR CCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGCCTCTTCTCTGCCATaGTCTTCCGCTTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLASSLP*SSACSH
Trigger: GTGGGAACAAGCGGAAGACCATGGCAGAGAAGAGGC...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCGCCTCTTCTCTGCCATaGTCTTCCGCTTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLASSLP*SSACSH
Trigger: GTGGGAACAAGCGGAAGACCATGGCAGAGAAGAGGC...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCGCCTCTTCTCTGCCATaGTCTTCCGCTTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GEECASGGRPCLRHVGASASSLP*SSACSH
Trigger: GTGGGAACAAGCGGAAGACCATGGCAGAGAAGAGGC...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCAGCCAGACAAGGCACTaGGGAGGAGGGTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSSQTRH*GGGSAI
Trigger: GATGGCTGACCCTCCTCCCCAGTGCCTTGTCTGGCT...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAAGCCAGACAAGGCACTaGGGAGGAGGGTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPSQTRH*GGGSAI
Trigger: GATGGCTGACCCTCCTCCCCAGTGCCTTGTCTGGCT...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGCGGGGGTTCTCTCGTaGGTACACACCCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLAGVLS*VHTPKI
Trigger: AATCTTTGGGGTGTGTACCCACGAGAGAACCCCCGC...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCGCGGGGGTTCTCTCGTaGGTACACACCCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: GEECASGGRPCLRHVGASAGVLS*VHTPKI
Trigger: AATCTTTGGGGTGTGTACCCACGAGAGAACCCCCGC...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGACCTCTTGGTGGGAGTaGGCACTCCAGAGGACATGT +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLTSWWE*ALQRTC
Trigger: ACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGGT...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCACCTCTTGGTGGGAGTaGGCACTCCAGAGGACATGT +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSTSWWE*ALQRTC
Trigger: ACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGGT...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGTGCCTTCTCAGGGGTaGGCTGGGAGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQVPSQG*AGRPAR
Trigger: ACGAGCAGGCCTCCCAGCCCACCCCTGAGAAGGCAC...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCATCAGCTCTTCCAGCTaGACCATCAGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFISSSS*TISSRL
Trigger: CAGGCGGGAGCTGATGGTCCAGCTGGAAGAGCTGAT...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTATCAGCTCTTCCAGCTaGACCATCAGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPISSSS*TISSRL
Trigger: CAGGCGGGAGCTGATGGTCCAGCTGGAAGAGCTGAT...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGTGGAGCGCACTGGCATaGGCATTGGCCGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVWSALA*ALAGRL
Trigger: GAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCA...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCTGGAGCGCACTGGCATaGGCATTGGCCGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVWSALA*ALAGRL
Trigger: GAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCA...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGAGTCCTGCGGACAGTaGGTGGGGGTGGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRAESCGQ*VGVEPA
Trigger: TGCCGGCTCCACCCCCACCCACTGTCCGCAGGACTC...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCAGAGGAATGTGCCTCTaGGGGAAGACCTTGCCTTCG +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLRGMCL*GKTLPS
Trigger: CGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCAGAGGAATGTGCCTCTaGGGGAAGACCTTGCCTTCG +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSRGMCL*GKTLPS
Trigger: CGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCCACTCTTGGTGGGAGTaGGCACTCCAGAGGACATGT +
Preference number: 4 (lower is better)
Translates to: GEECASGGRPCLRHVGASHSWWE*ALQRTC
Trigger: ACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGTG...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356599.9
ENST00000405222.5
ENST00000407038.7
ENST00000407186.5
CDS-3UTR CCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCCACTCTTGGTGGGAGTaGGCACTCCAGAGGACATGT +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLHSWWE*ALQRTC
Trigger: ACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGTG...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356599.9
ENST00000405222.5
ENST00000407038.7
ENST00000407186.5
CDS-3UTR CCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCCAGAACACTCTTGGTaGGAGTGGGCACTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLPEHSW*EWALQR
Trigger: CCTCTGGAGTGCCCACTCCCACCAAGAGTGTTCTGG...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356599.9
ENST00000405222.5
ENST00000407038.7
ENST00000407186.5
CDS-3UTR TCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCGAGGCGGGACACACTaGTCTCGGTGGTATGGTCCA +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSARGGTH*SRWYGP
Trigger: TGGACCATACCACCGAGATCAGTGTGTCCCGCCTCG...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCAGTAGATGGAGGAGATaGCAGTTTCGAGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLSRWRR*QFRGGT
Trigger: TGTCCCGCCTCGAAACTGTCATCTCCTCCATCTACT...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCAGTAGATGGAGGAGATaGCAGTTTCGAGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSSRWRR*QFRGGT
Trigger: TGTCCCGCCTCGAAACTGTCATCTCCTCCATCTACT...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTTCCAGGCGGAGACGCTaGATCTCCTGCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTSRRRR*ISCRIS
Trigger: AGAGATCCTGCAGGAGATTCAGCGTCTCCGCCTGGA...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCATGACATGGTGTTGGTaGTGGAGTCAGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLMTWCW*WSQLPP
Trigger: TGGTGGCAGCTGACTCCATCACCAACACCATGTCAT...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCATGACATGGTGTTGGTaGTGGAGTCAGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSMTWCW*WSQLPP
Trigger: TGGTGGCAGCTGACTCCATCACCAACACCATGTCAT...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCCTCCTTCACCAGGGATaGCATGGTGTTGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLLLHQG*HGVGDG
Trigger: TCCATCACCAACACCATGTCATCCCTGGTGAAGGAG...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGCTCCTTCACCAGGGATaGCATGGTGTTGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLLLHQG*HGVGDG
Trigger: TCCATCACCAACACCATGTCATCCCTGGTGAAGGAG...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCTGCACCTTCCTCTGCTaGATGGAGCTCCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLCTFLC*MELLHQ
Trigger: CTGGTGAAGGAGCTCCATTCAGCAGAGGAAGGTGCA...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288642.12
ENST00000406818.7
ENST00000407186.5
CDS-3UTR TCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTTGCACCTTCCTCTGCTaGATGGAGCTCCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCCTFLC*MELLHQ
Trigger: CTGGTGAAGGAGCTCCATTCAGCAGAGGAAGGTGCA...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288642.12
ENST00000406818.7
ENST00000407186.5
CDS-3UTR TCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGCTCGTCCTCTGTGCCTaGGCTTCCTCTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSLVLCA*ASSVSG
Trigger: GCCGGACACAGAGGAAGCTCAGGCACAGAGGACGAG...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GCCACGCCAAAAGCAATTCTGGCAGAGCTGATAGTTGTGGCACTGCTGGCATCGGTCGGGAAGGTCTCCTaGGGCCTCACTCCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: ATPKAILAELIVVALLASVGKVS*GLTPPH
Trigger: GTGCGGAGGAGTGAGGCCGCAGGAGACCTTCCCGAC...CGATGCCAGCAGTGCCACAACTATCAGCTCTGCCAGAATTGCTTTTGGCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCTTCCTCAATCATCCTTaGTCACTTCCCCGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGAFLNHP*SLPRRS
Trigger: GCTCCGGCGGGGAAGTGAGCAAGGATGATTGAGGAA...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTACTGTCCAGAACACGTaGACAGTGCTGCAGACGGGC +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTTVQNT*TVLQTG
Trigger: GCCCGTCTGCAGCACTGTGCACGTGTTCTGGACAGT...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR GCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTACTGTCCAGAACACGTaGACAGTGCTGCAGACGGGC +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLTVQNT*TVLQTG
Trigger: GCCCGTCTGCAGCACTGTGCACGTGTTCTGGACAGT...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR GCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCACTGTCCAGAACACGTaGACAGTGCTGCAGACGGGC +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRTVQNT*TVLQTG
Trigger: GCCCGTCTGCAGCACTGTGCACGTGTTCTGGACAGT...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGAGGGCCGACATCCTCTaGTCCAGTTCATCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLRADIL*SSSSFL
Trigger: AAGGAAGGATGAACTGGAGCAGAGGATGTCGGCCCT...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCTCCCGCCTGCTCTCCTaGAGGGCCGACATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVSRLLS*RADILC
Trigger: GCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGA...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GCGAGCTATAAGACGGTGTTCCTCATCCAGTCGGCTAGGACTGTCCAGAACACGTGTGCGAAGGCCTCCTaGACGTCTCCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: ASYKTVFLIQSARTVQNTCAKAS*TSPPTP
Trigger: CGGAGTCGGGGGAGACGTGCAGGAGGCCTTCGCACA...CGTGTTCTGGACAGTCCTAGCCGACTGGATGAGGAACACCGTCTTATAGCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398951.6
CDS-3UTR GCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTTGTGCGAAGGCCTCCTaGACGTCTCCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRACAKAS*TSPPTP
Trigger: CGGAGTCGGGGGAGACGTGCAGGAGGCCTTCGCACA...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCTCTCCTCGTACCTTGTaGGAAGGCCTCCTGCACGTC +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRSPRTL*EGLLHV
Trigger: GACGTGCAGGAGGCCTTCGCACAAGGTACGAGGAGA...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTTCTCCTCGTACCTTGTaGGAAGGCCTCCTGCACGTC +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLSPRTL*EGLLHV
Trigger: GACGTGCAGGAGGCCTTCGCACAAGGTACGAGGAGA...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTCCACCAGCAGGTCATTaGGGAGGTTTCTCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPPPAGH*GGFSSY
Trigger: GTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGG...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTCCACCAGCAGGTCATTaGGGAGGTTTCTCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAPPAGH*GGFSSY
Trigger: GTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGG...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCGGTGATGGAGTCAGCTaGCACCAGCAGGTCATTGCG +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSGDGVS*HQQVIA
Trigger: CGCAATGACCTGCTGGTGGCAGCTGACTCCATCACC...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTAGCCTGGTCCAGGTGTaGGGTGGAAAGATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLSLVQV*GGKMER
Trigger: CCTCTCCATCTTTCCACCGCACACCTGGACCAGGCT...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTGCGGAGATGAGACCATaGCCTGAGGGGAGTGATGAA +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELAEMRP*PEGSDE
Trigger: TTCATCACTCCCCTCAGGGCATGGTCTCATCTCCGC...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCGCGGAGATGAGACCATaGCCTGAGGGGAGTGATGAA +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFAEMRP*PEGSDE
Trigger: TTCATCACTCCCCTCAGGGCATGGTCTCATCTCCGC...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGCGGAGATGAGACCATaGCCTGAGGGGAGTGATGAA +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAAEMRP*PEGSDE
Trigger: TTCATCACTCCCCTCAGGGCATGGTCTCATCTCCGC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCGCCTCTTCTCTGCCATaGTCTTCCGCTTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFASSLP*SSACSH
Trigger: GTGGGAACAAGCGGAAGACCATGGCAGAGAAGAGGC...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGGCGGGGGTTCTCTCGTaGGTACACACCCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATAGVLS*VHTPKI
Trigger: AATCTTTGGGGTGTGTACCCACGAGAGAACCCCCGC...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGCGGGGGTTCTCTCGTaGGTACACACCCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAAGVLS*VHTPKI
Trigger: AATCTTTGGGGTGTGTACCCACGAGAGAACCCCCGC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTGCGGGGGTTCTCTCGTaGGTACACACCCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCAGVLS*VHTPKI
Trigger: AATCTTTGGGGTGTGTACCCACGAGAGAACCCCCGC...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGACTGTAACCTCTTGGTaGGAGTGGGCACTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQTVTSW*EWALQR
Trigger: CCTCTGGAGTGCCCACTCCCACCAAGAGGTTACAGT...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGGTGCCTTCTCAGGGGTaGGCTGGGAGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVVPSQG*AGRPAR
Trigger: ACGAGCAGGCCTCCCAGCCCACCCCTGAGAAGGCAC...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAATCAGCTCTTCCAGCTaGACCATCAGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPISSSS*TISSRL
Trigger: CAGGCGGGAGCTGATGGTCCAGCTGGAAGAGCTGAT...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTATCAGCTCTTCCAGCTaGACCATCAGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLISSSS*TISSRL
Trigger: CAGGCGGGAGCTGATGGTCCAGCTGGAAGAGCTGAT...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGCCGCCTCCATGGGTaGGCGATGTATGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQGRLHG*AMYVVT
Trigger: GGTCACCACATACATCGCCCACCCATGGAGGCGGCC...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGGCCGGCCGCCTCCATaGGTGGGCGATGTATGTGGT +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRAGRPPP*VGDVCG
Trigger: ACCACATACATCGCCCACCCATGGAGGCGGCCGGCC...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTCACTGGCATGGGCATTaGCCGGCCGCCTCCATGGGT +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRAHWHGH*PAASMG
Trigger: ACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTG...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CACGCCAAAAGCAATTCTGGCAGAGCTGATAGTTGTGGCACTGCTGGCATCGGTTGGAGCGCACTGGCATaGGCATTGGCCGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: HAKSNSGRADSCGTAGIGWSALA*ALAGRL
Trigger: GAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCA...ACCGATGCCAGCAGTGCCACAACTATCAGCTCTGCCAGAATTGCTTTTGGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCAGACGTGGAGCGCACTaGCATGGGCATTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVRRGAH*HGHWPA
Trigger: GGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTCT...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCTGGAGCCGGCAGACGTaGAGCGCACTGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVWSRQT*SALAWA
Trigger: TGCCCATGCCAGTGCGCTCCACGTCTGCCGGCTCCA...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGTGGAGCCGGCAGACGTaGAGCGCACTGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVWSRQT*SALAWA
Trigger: TGCCCATGCCAGTGCGCTCCACGTCTGCCGGCTCCA...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCCCTTCCTCTGCTGAATaGAGCTCCTTCACCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLPSSAE*SSFTRD
Trigger: ATCCCTGGTGAAGGAGCTCCATTCAGCAGAGGAAGG...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288642.12
ENST00000406818.7
ENST00000407186.5
CDS-3UTR CCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCTGTGCGGTGGAAAGATaGAGAGGAATGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLCAVER*RGMCLW
Trigger: CCAGAGGCACATTCCTCTCCATCTTTCCACCGCACA...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGTGGAGTGACGTCTaGCAGCCTGCAAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQGWSDV*QPASLV
Trigger: GACCAGGCTTGCAGGCTGCCAGACGTCACTCCACCC...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCCTCTCCCTGGCGGGTaGAGTGACGTCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVPLPGG*SDVWQP
Trigger: AGGCTGCCAGACGTCACTCCACCCGCCAGGGAGAGG...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGTGTCCAGAACACTCTTaGTGGGAGTGGGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQCPEHS*WEWALQ
Trigger: CTGGAGTGCCCACTCCCACCAAGAGTGTTCTGGACA...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356599.9
ENST00000405222.5
ENST00000407038.7
ENST00000407186.5
CDS-3UTR CCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCTGTCCAGAACACTCTTaGTGGGAGTGGGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFCPEHS*WEWALQ
Trigger: CTGGAGTGCCCACTCCCACCAAGAGTGTTCTGGACA...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356599.9
ENST00000405222.5
ENST00000407038.7
ENST00000407186.5
CDS-3UTR CCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTATGTGGTGACCCTGTaGCCTGAGCTGCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLYVVTL*PELPAF
Trigger: AAAAGCAGGCAGCTCAGGCCACAGGGTCACCACATA...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
3UTR CAA 72 bp GAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTaGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: ERWRGMCLWGKT*PSPCRRQLAPR
Trigger: ACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGGAGCACGCATTTCTATaGACAGCTGCCTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLEHAFL*TAASSL
Trigger: CAGAGAAGAGGCAGCTGTTCATAGAAATGCGTGCTC...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGAGTAGATGGAGGAGATaGCAGTTTCGAGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATSRWRR*QFRGGT
Trigger: TGTCCCGCCTCGAAACTGTCATCTCCTCCATCTACT...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCAGTAGATGGAGGAGATaGCAGTTTCGAGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFSRWRR*QFRGGT
Trigger: TGTCCCGCCTCGAAACTGTCATCTCCTCCATCTACT...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTAGTAGATGGAGGAGATaGCAGTTTCGAGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCSRWRR*QFRGGT
Trigger: TGTCCCGCCTCGAAACTGTCATCTCCTCCATCTACT...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGGGCAAGCCTGTGCATaGGAGGTAGCCAGACAAGGC +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSGQACA*EVARQG
Trigger: GCCTTGTCTGGCTACCTCTCATGCACAGGCTTGCCC...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGCAAGCCTGTGCATaGGAGGTAGCCAGACAAGGC +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQGQACA*EVARQG
Trigger: GCCTTGTCTGGCTACCTCTCATGCACAGGCTTGCCC...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTTGCTCATCGGCCAAGTaGCTGGGTATATCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCCSSAK*LGISWL
Trigger: TAGCCAGGATATACCCAGTCACTTGGCCGATGAGCA...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR TCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGTGCTCATCGGCCAAGTaGCTGGGTATATCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQCSSAK*LGISWL
Trigger: TAGCCAGGATATACCCAGTCACTTGGCCGATGAGCA...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR TCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTTGCTCATCGGCCAAGTaGCTGGGTATATCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELCSSAK*LGISWL
Trigger: TAGCCAGGATATACCCAGTCACTTGGCCGATGAGCA...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR TCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCATGACATGGTGTTGGTaGTGGAGTCAGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLMTWCW*WSQLPP
Trigger: TGGTGGCAGCTGACTCCATCACCAACACCATGTCAT...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTCCTTCACCAGGGATaGCATGGTGTTGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQLLHQG*HGVGDG
Trigger: TCCATCACCAACACCATGTCATCCCTGGTGAAGGAG...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTCTCCTTCACCAGGGATaGCATGGTGTTGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCLLHQG*HGVGDG
Trigger: TCCATCACCAACACCATGTCATCCCTGGTGAAGGAG...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTTCCTCAATCATCCTTaGTCACTTCCCCGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSFLNHP*SLPRRS
Trigger: GCTCCGGCGGGGAAGTGAGCAAGGATGATTGAGGAA...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCGCTGTGGAAAACAGGTaGGGACTGAGTGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFAVENR*GLSALC
Trigger: ACACAGAGCACTCAGTCCGCACCTGTTTTCCACAGC...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGCTGTGGAAAACAGGTaGGGACTGAGTGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPAVENR*GLSALC
Trigger: ACACAGAGCACTCAGTCCGCACCTGTTTTCCACAGC...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGGCTGTGGAAAACAGGTaGGGACTGAGTGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQAVENR*GLSALC
Trigger: ACACAGAGCACTCAGTCCGCACCTGTTTTCCACAGC...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGGCTGTGGAAAACAGGTaGGGACTGAGTGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATAVENR*GLSALC
Trigger: ACACAGAGCACTCAGTCCGCACCTGTTTTCCACAGC...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCGCTGTGGAAAACAGGTaGGGACTGAGTGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLAVENR*GLSALC
Trigger: ACACAGAGCACTCAGTCCGCACCTGTTTTCCACAGC...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGACGAGTCACGTTTCCTaGTTCTGCAGCCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQTSHVS*FCSQPG
Trigger: GCCCGGCTGGCTGCAGAAGCAGGAAACGTGACTCGT...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GTGATGGAGTCAGCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTACGAGTCACGTTTCCTaGTTCTGCAGCCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: VMESAATSRSLRRFLLVPTSHVS*FCSQPG
Trigger: GCCCGGCTGGCTGCAGAAGCAGGAAACGTGACTCGT...AGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGCTGACTCCATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGACGAGTCACGTTTCCTaGTTCTGCAGCCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSTSHVS*FCSQPG
Trigger: GCCCGGCTGGCTGCAGAAGCAGGAAACGTGACTCGT...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTAGGGCCGACATCCTCTaGTCCAGTTCATCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELRADIL*SSSSFL
Trigger: AAGGAAGGATGAACTGGAGCAGAGGATGTCGGCCCT...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGGGCCGACATCCTCTaGTCCAGTTCATCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGARADIL*SSSSFL
Trigger: AAGGAAGGATGAACTGGAGCAGAGGATGTCGGCCCT...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCAGGGCCGACATCCTCTaGTCCAGTTCATCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLRADIL*SSSSFL
Trigger: AAGGAAGGATGAACTGGAGCAGAGGATGTCGGCCCT...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTCCACCAGCAGGTCATTaGGGAGGTTTCTCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLPPAGH*GGFSSY
Trigger: GTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGG...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGAGATGGAGAGGAATGTaGCTCTGGGGGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQRWRGM*LWGKTL
Trigger: CAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTAGATGGAGAGGAATGTaGCTCTGGGGGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPRWRGM*LWGKTL
Trigger: CAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGAGCCTGGTCCAGGTGTaGGGTGGAAAGATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSASLVQV*GGKMER
Trigger: CCTCTCCATCTTTCCACCGCACACCTGGACCAGGCT...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTGCGGAGATGAGACCATaGCCTGAGGGGAGTGATGAA +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTAEMRP*PEGSDE
Trigger: TTCATCACTCCCCTCAGGGCATGGTCTCATCTCCGC...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCGCCTCTTCTCTGCCATaGTCTTCCGCTTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRASSLP*SSACSH
Trigger: GTGGGAACAAGCGGAAGACCATGGCAGAGAAGAGGC...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGAGCACTCCACGGGATaGAAGACATTCTCAACATGG +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLEHSTG*KTFSTW
Trigger: CCATGTTGAGAATGTCTTCCATCCCGTGGAGTGCTC...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCGAGCACTCCACGGGATaGAAGACATTCTCAACATGG +
Preference number: 4 (lower is better)
Translates to: GEECASGGRPCLRHVGASEHSTG*KTFSTW
Trigger: CCATGTTGAGAATGTCTTCCATCCCGTGGAGTGCTC...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCACCTCTTGGTGGGAGTaGGCACTCCAGAGGACATGT +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSTSWWE*ALQRTC
Trigger: ACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGGT...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CCA 90 bp ACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACTATACTGTAACCTCTTaGTGGGAGTGGGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: TGMGIGRPPPWVGDVCGDYTVTS*WEWALQ
Trigger: CTGGAGTGCCCACTCCCACCAAGAGGTTACAGTATA...GTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398951.6
CDS-3UTR CCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTATACTGTAACCTCTTaGTGGGAGTGGGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLYTVTS*WEWALQ
Trigger: CTGGAGTGCCCACTCCCACCAAGAGGTTACAGTATA...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGATCAGCTCTTCCAGCTaGACCATCAGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAISSSS*TISSRL
Trigger: CAGGCGGGAGCTGATGGTCCAGCTGGAAGAGCTGAT...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCTATGTGGTGACCCTGTaGCCTGAGCCTTCAGCAACT +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGAYVVTL*PEPSAT
Trigger: AGTTGCTGAAGGCTCAGGCCACAGGGTCACCACATA...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000405222.5
ENST00000407186.5
CDS-3UTR CCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCCGCCTCCATGGGTaGGCGATGTATGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVGRLHG*AMYVVT
Trigger: GGTCACCACATACATCGCCCACCCATGGAGGCGGCC...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TTCTCTGGTTGCTCAGGAAAAACAGGATGCGGGGGTTCTCTCGTGGGTACACACAGACGTGGAGCGCACTaGCATGGGCATTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: FSGCSGKTGCGGSLVGTHRRGAH*HGHWPA
Trigger: GGCCGGCCAATGCCCATGCCAGTGCGCTCCACGTCT...GTGTGTACCCACGAGAGAACCCCCGCATCCTGTTTTTCCTGAGCAACCAGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTAGAGGAATGTGCCTCTaGGGGAAGACCTTGCCTTCG +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLRGMCL*GKTLPS
Trigger: CGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGAGGAATGTGCCTCTaGGGGAAGACCTTGCCTTCG +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTRGMCL*GKTLPS
Trigger: CGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCAGAGGAATGTGCCTCTaGGGGAAGACCTTGCCTTCG +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSRGMCL*GKTLPS
Trigger: CGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCTGTGCGGTGGAAAGATaGAGAGGAATGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGACAVER*RGMCLW
Trigger: CCAGAGGCACATTCCTCTCCATCTTTCCACCGCACA...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTTGTGCGGTGGAAAGATaGAGAGGAATGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCCAVER*RGMCLW
Trigger: CCAGAGGCACATTCCTCTCCATCTTTCCACCGCACA...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCTGTGCGGTGGAAAGATaGAGAGGAATGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLCAVER*RGMCLW
Trigger: CCAGAGGCACATTCCTCTCCATCTTTCCACCGCACA...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGTGTGCGGTGGAAAGATaGAGAGGAATGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQCAVER*RGMCLW
Trigger: CCAGAGGCACATTCCTCTCCATCTTTCCACCGCACA...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GCCACGCCAAAAGCAATTCTGGCAGAGCTGATAGTTGTGGCACTGCTGGCATCGGGCAGCCTGCAAGCCTaGTCCAGGTGTGCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: ATPKAILAELIVVALLASGSLQA*SRCAVE
Trigger: TTCCACCGCACACCTGGACCAGGCTTGCAGGCTGCC...CGATGCCAGCAGTGCCACAACTATCAGCTCTGCCAGAATTGCTTTTGGCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGGCAGCCTGCAAGCCTaGTCCAGGTGTGCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRAGSLQA*SRCAVE
Trigger: TTCCACCGCACACCTGGACCAGGCTTGCAGGCTGCC...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCTGTCCAGAACACTCTTaGTGGGAGTGGGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: AATSRSLRRFLLVPCAKACPEHS*WEWALQ
Trigger: CTGGAGTGCCCACTCCCACCAAGAGTGTTCTGGACA...GGCCTTCGCACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356599.9
CDS-3UTR CCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCTATGTGGTGACCCTGTaGCCTGAGCTGCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLYVVTL*PELPAF
Trigger: AAAAGCAGGCAGCTCAGGCCACAGGGTCACCACATA...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
CDS-3UTR CCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTTATGTGGTGACCCTGTaGCCTGAGCTGCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELYVVTL*PELPAF
Trigger: AAAAGCAGGCAGCTCAGGCCACAGGGTCACCACATA...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
CDS-3UTR TCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCGAGCACGCATTTCTATaGACAGCTGCCTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGAEHAFL*TAASSL
Trigger: CAGAGAAGAGGCAGCTGTTCATAGAAATGCGTGCTC...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCGAGCACGCATTTCTATaGACAGCTGCCTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLEHAFL*TAASSL
Trigger: CAGAGAAGAGGCAGCTGTTCATAGAAATGCGTGCTC...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGGAGCACGCATTTCTATaGACAGCTGCCTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQEHAFL*TAASSL
Trigger: CAGAGAAGAGGCAGCTGTTCATAGAAATGCGTGCTC...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCCGAGGCGGGACACACTaGTCTCGGTGGTATGGTCCA +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVRGGTH*SRWYGP
Trigger: TGGACCATACCACCGAGATCAGTGTGTCCCGCCTCG...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTCCACACTAATTTGGTaGGTAGAAGGAAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: GEECASGGRPCLRHVGASSTLIW*VEGRRL
Trigger: CAAGCGCCTTCCTTCTACTCACCAAATTAGTGTGGA...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTCCACACTAATTTGGTaGGTAGAAGGAAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLSTLIW*VEGRRL
Trigger: CAAGCGCCTTCCTTCTACTCACCAAATTAGTGTGGA...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCAAAACAGGTGCGGACTaGGTGCTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLKTGAD*VLCVTK
Trigger: TTTGGTTACACAGAGCACTCAGTCCGCACCTGTTTT...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGGCAAGCCTGTGCATaGGAGGTAGCCAGACAAGGC +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVGQACA*EVARQG
Trigger: GCCTTGTCTGGCTACCTCTCATGCACAGGCTTGCCC...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCATGCTCATCGGCCAAGTaGCTGGGTATATCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPCSSAK*LGISWL
Trigger: TAGCCAGGATATACCCAGTCACTTGGCCGATGAGCA...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR TCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGCTCATCGGCCAAGTaGCTGGGTATATCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSCSSAK*LGISWL
Trigger: TAGCCAGGATATACCCAGTCACTTGGCCGATGAGCA...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR TCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGTCCAGGCGGAGACGCTaGATCTCCTGCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQSRRRR*ISCRIS
Trigger: AGAGATCCTGCAGGAGATTCAGCGTCTCCGCCTGGA...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTATGACATGGTGTTGGTaGTGGAGTCAGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTMTWCW*WSQLPP
Trigger: TGGTGGCAGCTGACTCCATCACCAACACCATGTCAT...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGGCTCCTCTGCTAACCTaGATGGAGCTCCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAAPLLT*MELLHQ
Trigger: CTGGTGAAGGAGCTCCATTCAGGTTAGCAGAGGAGC...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356599.9
ENST00000398951.6
ENST00000407661.7
CDS-3UTR TCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGGTGACCCTGTGGCCTaGGCTGCCTGCTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRAGDPVA*AACFCS
Trigger: AGAGCAAAAGCAGGCAGCTCAGGCCACAGGGTCACC...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
CDS-3UTR GCA 90 bp GCTCTTCCAGCTGGACCATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCATTTCTATGAACAGCTaGCTCTTCTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: ALPAGPSAPACSPAGPTSISMNS*LFSAMV
Trigger: GACCATGGCAGAGAAGAGGCAGCTGTTCATAGAAAT...GGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGGTCCAGCTGGAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCAAAATACCGTCAACTTaGCTCGGCCCTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLKIPST*LGPHCH
Trigger: ATGACAGTGAGGGCCGAGGCAAGTTGACGGTATTTT...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCAAAATACCGTCAACTTaGCTCGGCCCTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSKIPST*LGPHCH
Trigger: ATGACAGTGAGGGCCGAGGCAAGTTGACGGTATTTT...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCACATGGGCAAGCCTGTaGATGAGAGGTAGCCAGACA +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRTWASL*MRGSQT
Trigger: TGTCTGGCTACCTCTCATGCACAGGCTTGCCCATGT...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTACATGGGCAAGCCTGTaGATGAGAGGTAGCCAGACA +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLTWASL*MRGSQT
Trigger: TGTCTGGCTACCTCTCATGCACAGGCTTGCCCATGT...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCGATTTCCAAGAGGAATaGTCCTTCATCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLDFQEE*SFIWCW
Trigger: CCAGCACCAGATGAAGGAGCATTCCTCTTGGAAATC...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGACTGTCCAGAACACGTaGACAGTGCTGCAGACGGGC +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSTVQNT*TVLQTG
Trigger: GCCCGTCTGCAGCACTGTGCACGTGTTCTGGACAGT...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCACGAGTCACGTTTCCTaGTTCTGCAGCCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVTSHVS*FCSQPG
Trigger: GCCCGGCTGGCTGCAGAAGCAGGAAACGTGACTCGT...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTAGGGCCGACATCCTCTaGTCCAGTTCATCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLRADIL*SSSSFL
Trigger: AAGGAAGGATGAACTGGAGCAGAGGATGTCGGCCCT...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAAGGGCCGACATCCTCTaGTCCAGTTCATCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPRADIL*SSSSFL
Trigger: AAGGAAGGATGAACTGGAGCAGAGGATGTCGGCCCT...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCAGGGCCGACATCCTCTaGTCCAGTTCATCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSRADIL*SSSSFL
Trigger: AAGGAAGGATGAACTGGAGCAGAGGATGTCGGCCCT...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCAGGGCCGACATCCTCTaGTCCAGTTCATCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRRADIL*SSSSFL
Trigger: AAGGAAGGATGAACTGGAGCAGAGGATGTCGGCCCT...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ATAGCGAGCTATAAGACGGTGTTCCTCATCCAGTCGGCTAGGACTGTCCAGAACCCATCAGCTCCCGCCTaGTCTCCTGCAGGGCCGACA +
Preference number: 4 (lower is better)
Translates to: IASYKTVFLIQSARTVQNPSAPA*SPAGPT
Trigger: TGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGG...GTTCTGGACAGTCCTAGCCGACTGGATGAGGAACACCGTCTTATAGCTCGCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTAGATGGAGAGGAATGTaGCTCTGGGGGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLRWRGM*LWGKTL
Trigger: CAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGAGCCTGGTCCAGGTGTaGGGTGGAAAGATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQSLVQV*GGKMER
Trigger: CCTCTCCATCTTTCCACCGCACACCTGGACCAGGCT...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGGCGGAGATGAGACCATaGCCTGAGGGGAGTGATGAA +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAAEMRP*PEGSDE
Trigger: TTCATCACTCCCCTCAGGGCATGGTCTCATCTCCGC...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCCTGATCTCGGTGGTATaGTCCAGTGTATTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSLISVV*SSVLRP
Trigger: TGGCCTTAATACACTGGACCATACCACCGAGATCAG...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGCTGATCTCGGTGGTATaGTCCAGTGTATTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLLISVV*SSVLRP
Trigger: TGGCCTTAATACACTGGACCATACCACCGAGATCAG...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GCCACGCCAAAAGCAATTCTGGCAGAGCTGATAGTTGTGGCACTGCTGGCATCGAGCCAGACAAGGCACTaGGGAGGAGGGTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: ATPKAILAELIVVALLASSQTRH*GGGSAI
Trigger: GATGGCTGACCCTCCTCCCCAGTGCCTTGTCTGGCT...CGATGCCAGCAGTGCCACAACTATCAGCTCTGCCAGAATTGCTTTTGGCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTAGCCAGACAAGGCACTaGGGAGGAGGGTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRASQTRH*GGGSAI
Trigger: GATGGCTGACCCTCCTCCCCAGTGCCTTGTCTGGCT...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTGAGCACTCCACGGGATaGAAGACATTCTCAACATGG +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCEHSTG*KTFSTW
Trigger: CCATGTTGAGAATGTCTTCCATCCCGTGGAGTGCTC...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCGAGCACTCCACGGGATaGAAGACATTCTCAACATGG +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFEHSTG*KTFSTW
Trigger: CCATGTTGAGAATGTCTTCCATCCCGTGGAGTGCTC...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCATGTGCAAGGTCAAGTaGTTTCTCTGGTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLMCKVK*FLWLLR
Trigger: CCTGAGCAACCAGAGAAACCACTTGACCTTGCACAT...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCTCCTGCACACCTCTTGGTGGGAGTaGGCACTCCAGAGGACATGT +
Preference number: 4 (lower is better)
Translates to: QQVIAEVSPRTLCEGLLHTSWWE*ALQRTC
Trigger: ACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGGT...GTGCAGGAGGCCTTCGCACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398951.6
CDS-3UTR CCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGTATACTGTAACCTCTTaGTGGGAGTGGGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATYTVTS*WEWALQ
Trigger: CTGGAGTGCCCACTCCCACCAAGAGGTTACAGTATA...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGTATACTGTAACCTCTTaGTGGGAGTGGGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQYTVTS*WEWALQ
Trigger: CTGGAGTGCCCACTCCCACCAAGAGGTTACAGTATA...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCCATCGGCCAAGTGACTaGGTATATCCTGGCTATACT +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLHRPSD*VYPGYT
Trigger: AGTATAGCCAGGATATACCCAGTCACTTGGCCGATG...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGATCAGCTCTTCCAGCTaGACCATCAGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQISSSS*TISSRL
Trigger: CAGGCGGGAGCTGATGGTCCAGCTGGAAGAGCTGAT...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTTATGTGGTGACCCTGTaGCCTGAGCCTTCAGCAACT +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTYVVTL*PEPSAT
Trigger: AGTTGCTGAAGGCTCAGGCCACAGGGTCACCACATA...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000405222.5
ENST00000407186.5
CDS-3UTR CCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCACTCTTGGTGGGAGTaGGCACTCCAGAGGACATGT +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAHSWWE*ALQRTC
Trigger: ACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGTG...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356599.9
ENST00000405222.5
ENST00000407038.7
ENST00000407186.5
CDS-3UTR CCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTTATGTGGTGACCCTGTaGCCTGAGCTGCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLYVVTL*PELPAF
Trigger: AAAAGCAGGCAGCTCAGGCCACAGGGTCACCACATA...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
3UTR CAA 72 bp GTGTTGGTGATGGAGTCAGCTGCCACCAGCAGGTCATaGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: VLVMESAATSRS*RRFLLVPCAKA
Trigger: GGCCTTCGCACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGCTGACTCCATCACCAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR TCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCGAGCACGCATTTCTATaGACAGCTGCCTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSEHAFL*TAASSL
Trigger: CAGAGAAGAGGCAGCTGTTCATAGAAATGCGTGCTC...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGAGCACGCATTTCTATaGACAGCTGCCTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPEHAFL*TAASSL
Trigger: CAGAGAAGAGGCAGCTGTTCATAGAAATGCGTGCTC...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGTCCACACTAATTTGGTaGGTAGAAGGAAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQSTLIW*VEGRRL
Trigger: CAAGCGCCTTCCTTCTACTCACCAAATTAGTGTGGA...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTTCCACACTAATTTGGTaGGTAGAAGGAAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCSTLIW*VEGRRL
Trigger: CAAGCGCCTTCCTTCTACTCACCAAATTAGTGTGGA...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCTCCACACTAATTTGGTaGGTAGAAGGAAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGASTLIW*VEGRRL
Trigger: CAAGCGCCTTCCTTCTACTCACCAAATTAGTGTGGA...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGAAAACAGGTGCGGACTaGGTGCTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQKTGAD*VLCVTK
Trigger: TTTGGTTACACAGAGCACTCAGTCCGCACCTGTTTT...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTAAAACAGGTGCGGACTaGGTGCTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELKTGAD*VLCVTK
Trigger: TTTGGTTACACAGAGCACTCAGTCCGCACCTGTTTT...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTAAAACAGGTGCGGACTaGGTGCTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAKTGAD*VLCVTK
Trigger: TTTGGTTACACAGAGCACTCAGTCCGCACCTGTTTT...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGATGACATGGTGTTGGTaGTGGAGTCAGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAMTWCW*WSQLPP
Trigger: TGGTGGCAGCTGACTCCATCACCAACACCATGTCAT...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGTTTTCAACCTCCAGGTaGATTCCTGATGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATFSTSR*IPDAEM
Trigger: CATCTCCGCATCAGGAATTCACCTGGAGGTTGAAAA...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCTTTTCAACCTCCAGGTaGATTCCTGATGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLFSTSR*IPDAEM
Trigger: CATCTCCGCATCAGGAATTCACCTGGAGGTTGAAAA...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTTTTTCAACCTCCAGGTaGATTCCTGATGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPFSTSR*IPDAEM
Trigger: CATCTCCGCATCAGGAATTCACCTGGAGGTTGAAAA...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGTTCCTCAATCATCCTTaGTCACTTCCCCGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQFLNHP*SLPRRS
Trigger: GCTCCGGCGGGGAAGTGAGCAAGGATGATTGAGGAA...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCATTTCTATGAACAGCTaGCTCTTCTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSISMNS*LFSAMV
Trigger: GACCATGGCAGAGAAGAGGCAGCTGTTCATAGAAAT...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCATTTCTATGAACAGCTaGCTCTTCTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLISMNS*LFSAMV
Trigger: GACCATGGCAGAGAAGAGGCAGCTGTTCATAGAAAT...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTAAAATACCGTCAACTTaGCTCGGCCCTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAKIPST*LGPHCH
Trigger: ATGACAGTGAGGGCCGAGGCAAGTTGACGGTATTTT...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGATTTCCAAGAGGAATaGTCCTTCATCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPADFQEE*SFIWCW
Trigger: CCAGCACCAGATGAAGGAGCATTCCTCTTGGAAATC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCGATTTCCAAGAGGAATaGTCCTTCATCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFDFQEE*SFIWCW
Trigger: CCAGCACCAGATGAAGGAGCATTCCTCTTGGAAATC...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCGATTTCCAAGAGGAATaGTCCTTCATCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLDFQEE*SFIWCW
Trigger: CCAGCACCAGATGAAGGAGCATTCCTCTTGGAAATC...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGATTTCCAAGAGGAATaGTCCTTCATCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPDFQEE*SFIWCW
Trigger: CCAGCACCAGATGAAGGAGCATTCCTCTTGGAAATC...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGTCTCCTCGTACCTTGTaGGAAGGCCTCCTGCACGTC +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVSPRTL*EGLLHV
Trigger: GACGTGCAGGAGGCCTTCGCACAAGGTACGAGGAGA...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGAGATGGAGAGGAATGTaGCTCTGGGGGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSARWRGM*LWGKTL
Trigger: CAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TCCAGAACACTCTTGGTGGGAGTGGGCACTCCAGAGGACATGTGGCTAACCATGAGCCTGGTCCAGGTGTaGGGTGGAAAGATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SRTLLVGVGTPEDMWLTMSLVQV*GGKMER
Trigger: CCTCTCCATCTTTCCACCGCACACCTGGACCAGGCT...CATGGTTAGCCACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGTGTTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356599.9
CDS-3UTR CCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTCTGATCTCGGTGGTATaGTCCAGTGTATTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPALISVV*SSVLRP
Trigger: TGGCCTTAATACACTGGACCATACCACCGAGATCAG...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGCTGATCTCGGTGGTATaGTCCAGTGTATTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATLISVV*SSVLRP
Trigger: TGGCCTTAATACACTGGACCATACCACCGAGATCAG...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTCTGATCTCGGTGGTATaGTCCAGTGTATTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPLISVV*SSVLRP
Trigger: TGGCCTTAATACACTGGACCATACCACCGAGATCAG...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCGAGCACTCCACGGGATaGAAGACATTCTCAACATGG +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRREHSTG*KTFSTW
Trigger: CCATGTTGAGAATGTCTTCCATCCCGTGGAGTGCTC...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGAGCACTCCACGGGATaGAAGACATTCTCAACATGG +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPEHSTG*KTFSTW
Trigger: CCATGTTGAGAATGTCTTCCATCCCGTGGAGTGCTC...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGGGGGTTCTCTCGTaGGTACACACCCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSAGVLS*VHTPKI
Trigger: AATCTTTGGGGTGTGTACCCACGAGAGAACCCCCGC...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGGTCAAGTGGTTTCTCTaGTTGCTCAGGAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLVKWFL*LLRKNR
Trigger: CCTGTTTTTCCTGAGCAACCAGAGAAACCACTTGAC...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTATGTGCAAGGTCAAGTaGTTTCTCTGGTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELMCKVK*FLWLLR
Trigger: CCTGAGCAACCAGAGAAACCACTTGACCTTGCACAT...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTATGTGCAAGGTCAAGTaGTTTCTCTGGTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAMCKVK*FLWLLR
Trigger: CCTGAGCAACCAGAGAAACCACTTGACCTTGCACAT...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGACTGTAACCTCTTGGTaGGAGTGGGCACTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSTVTSW*EWALQR
Trigger: CCTCTGGAGTGCCCACTCCCACCAAGAGGTTACAGT...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTTATACTGTAACCTCTTaGTGGGAGTGGGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTYTVTS*WEWALQ
Trigger: CTGGAGTGCCCACTCCCACCAAGAGGTTACAGTATA...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTCATCGGCCAAGTGACTaGGTATATCCTGGCTATACT +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPHRPSD*VYPGYT
Trigger: AGTATAGCCAGGATATACCCAGTCACTTGGCCGATG...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTATCAGCTCTTCCAGCTaGACCATCAGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRAISSSS*TISSRL
Trigger: CAGGCGGGAGCTGATGGTCCAGCTGGAAGAGCTGAT...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCCCAGAACACTCTTGGTaGGAGTGGGCACTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVPEHSW*EWALQR
Trigger: CCTCTGGAGTGCCCACTCCCACCAAGAGTGTTCTGG...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356599.9
ENST00000405222.5
ENST00000407038.7
ENST00000407186.5
CDS-3UTR CCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGTGTCCAGAACACTCTTaGTGGGAGTGGGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSCPEHS*WEWALQ
Trigger: CTGGAGTGCCCACTCCCACCAAGAGTGTTCTGGACA...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356599.9
ENST00000405222.5
ENST00000407038.7
ENST00000407186.5
CDS-3UTR TCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGGAGCACGCATTTCTATaGACAGCTGCCTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAEHAFL*TAASSL
Trigger: CAGAGAAGAGGCAGCTGTTCATAGAAATGCGTGCTC...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGAGTAGATGGAGGAGATaGCAGTTTCGAGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQSRWRR*QFRGGT
Trigger: TGTCCCGCCTCGAAACTGTCATCTCCTCCATCTACT...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTAAAACAGGTGCGGACTaGGTGCTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLKTGAD*VLCVTK
Trigger: TTTGGTTACACAGAGCACTCAGTCCGCACCTGTTTT...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCTTTTCAACCTCCAGGTaGATTCCTGATGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRFSTSR*IPDAEM
Trigger: CATCTCCGCATCAGGAATTCACCTGGAGGTTGAAAA...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGCTCCTCTGCTAACCTaGATGGAGCTCCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVAPLLT*MELLHQ
Trigger: CTGGTGAAGGAGCTCCATTCAGGTTAGCAGAGGAGC...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356599.9
ENST00000398951.6
ENST00000407661.7
CDS-3UTR GCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGTTCCTCAATCATCCTTaGTCACTTCCCCGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVFLNHP*SLPRRS
Trigger: GCTCCGGCGGGGAAGTGAGCAAGGATGATTGAGGAA...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCATTTCTATGAACAGCTaGCTCTTCTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLISMNS*LFSAMV
Trigger: GACCATGGCAGAGAAGAGGCAGCTGTTCATAGAAAT...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTATTTCTATGAACAGCTaGCTCTTCTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELISMNS*LFSAMV
Trigger: GACCATGGCAGAGAAGAGGCAGCTGTTCATAGAAAT...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCATTTCTATGAACAGCTaGCTCTTCTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFISMNS*LFSAMV
Trigger: GACCATGGCAGAGAAGAGGCAGCTGTTCATAGAAAT...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGGCCCTCACTGTCATATaGAGCAATCATAAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLALTVI*SNHKVE
Trigger: CTCAACTTTATGATTGCTGCATATGACAGTGAGGGC...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTAAAATACCGTCAACTTaGCTCGGCCCTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLKIPST*LGPHCH
Trigger: ATGACAGTGAGGGCCGAGGCAAGTTGACGGTATTTT...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGCTGTGGAAAACAGGTaGGGACTGAGTGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQAVENR*GLSALC
Trigger: ACACAGAGCACTCAGTCCGCACCTGTTTTCCACAGC...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGACATGGGCAAGCCTGTaGATGAGAGGTAGCCAGACA +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQTWASL*MRGSQT
Trigger: TGTCTGGCTACCTCTCATGCACAGGCTTGCCCATGT...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCGATTTCCAAGAGGAATaGTCCTTCATCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRDFQEE*SFIWCW
Trigger: CCAGCACCAGATGAAGGAGCATTCCTCTTGGAAATC...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGATTTCCAAGAGGAATaGTCCTTCATCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLDFQEE*SFIWCW
Trigger: CCAGCACCAGATGAAGGAGCATTCCTCTTGGAAATC...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCAGGAGGAACTATATGTaGAAGGTCAAGTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLRRNYM*KVKWFL
Trigger: GAGAAACCACTTGACCTTGCACATATAGTTCCTCCT...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCAGGAGGAACTATATGTaGAAGGTCAAGTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLRRNYM*KVKWFL
Trigger: GAGAAACCACTTGACCTTGCACATATAGTTCCTCCT...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGCATGGCTCAGCTTCTTTGCAGGAGATTTCCAAGAGGAATGCTCCTTCATCTGCAGCAGCCGCAGCTCTaGCAGCAGCGTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: CMAQLLCRRFPRGMLLHLQQPQL*QQRGVL
Trigger: CAGAACCCCACGCTGCTGGCAGAGCTGCGGCTGCTG...CAGATGAAGGAGCATTCCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGCGGAGATGAGACCATaGCCTGAGGGGAGTGATGAA +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRAAEMRP*PEGSDE
Trigger: TTCATCACTCCCCTCAGGGCATGGTCTCATCTCCGC...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGTGTAACCAAAAGATaGCCCTTCAAAGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLCVTKR*PFKDSC
Trigger: ACAGCTGTCTTTGAAGGGCCATCTTTTGGTTACACA...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTGTGTAACCAAAAGATaGCCCTTCAAAGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSCVTKR*PFKDSC
Trigger: ACAGCTGTCTTTGAAGGGCCATCTTTTGGTTACACA...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCTGTGTAACCAAAAGATaGCCCTTCAAAGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLCVTKR*PFKDSC
Trigger: ACAGCTGTCTTTGAAGGGCCATCTTTTGGTTACACA...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTGTCAAGTGGTTTCTCTaGTTGCTCAGGAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELVKWFL*LLRKNR
Trigger: CCTGTTTTTCCTGAGCAACCAGAGAAACCACTTGAC...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTATGTGCAAGGTCAAGTaGTTTCTCTGGTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTMCKVK*FLWLLR
Trigger: CCTGAGCAACCAGAGAAACCACTTGACCTTGCACAT...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCATGTGCAAGGTCAAGTaGTTTCTCTGGTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSMCKVK*FLWLLR
Trigger: CCTGAGCAACCAGAGAAACCACTTGACCTTGCACAT...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGACTGTAACCTCTTGGTaGGAGTGGGCACTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVTVTSW*EWALQR
Trigger: CCTCTGGAGTGCCCACTCCCACCAAGAGGTTACAGT...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCATCGGCCAAGTGACTaGGTATATCCTGGCTATACT +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRHRPSD*VYPGYT
Trigger: AGTATAGCCAGGATATACCCAGTCACTTGGCCGATG...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CCA 90 bp TGCATGGCTCAGCTTCTTTGCAGGAGATTTCCAAGAGGAATGCTCCTTCATCTGGGCCGGCCGCCTCCATaGGTGGGCGATGTATGTGGT +
Preference number: 4 (lower is better)
Translates to: CMAQLLCRRFPRGMLLHLGRPPP*VGDVCG
Trigger: ACCACATACATCGCCCACCCATGGAGGCGGCCGGCC...CAGATGAAGGAGCATTCCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp GCTAACCATGGTGTCATTCATATTAGTCAGAGGGCGAGGAGGAACTATATGTGCGAGTCCTGCGGACAGTaGGTGGGGGTGGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: ANHGVIHISQRARRNYMCESCGQ*VGVEPA
Trigger: TGCCGGCTCCACCCCCACCCACTGTCCGCAGGACTC...GCACATATAGTTCCTCCTCGCCCTCTGACTAATATGAATGACACCATGGTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGAGAGGAATGTGCCTCTaGGGGAAGACCTTGCCTTCG +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVRGMCL*GKTLPS
Trigger: CGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGTGTGCGGTGGAAAGATaGAGAGGAATGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSCAVER*RGMCLW
Trigger: CCAGAGGCACATTCCTCTCCATCTTTCCACCGCACA...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGGCCACGCCAAAAGCAATTCTGGCAGAGCTGATAGTTGTGGCACTGCTGGCACCAGAACACTCTTGGTaGGAGTGGGCACTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: MATPKAILAELIVVALLAPEHSW*EWALQR
Trigger: CCTCTGGAGTGCCCACTCCCACCAAGAGTGTTCTGG...TGCCAGCAGTGCCACAACTATCAGCTCTGCCAGAATTGCTTTTGGCGTGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356599.9
CDS-3UTR TCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGTCCACACTAATTTGGTaGGTAGAAGGAAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSASTLIW*VEGRRL
Trigger: CAAGCGCCTTCCTTCTACTCACCAAATTAGTGTGGA...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GCCACGCCAAAAGCAATTCTGGCAGAGCTGATAGTTGTGGCACTGCTGGCATCGCTCCTTCACCAGGGATaGCATGGTGTTGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: ATPKAILAELIVVALLASLLHQG*HGVGDG
Trigger: TCCATCACCAACACCATGTCATCCCTGGTGAAGGAG...CGATGCCAGCAGTGCCACAACTATCAGCTCTGCCAGAATTGCTTTTGGCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR TCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGTTTTCAACCTCCAGGTaGATTCCTGATGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAFSTSR*IPDAEM
Trigger: CATCTCCGCATCAGGAATTCACCTGGAGGTTGAAAA...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCATTTCTATGAACAGCTaGCTCTTCTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRISMNS*LFSAMV
Trigger: GACCATGGCAGAGAAGAGGCAGCTGTTCATAGAAAT...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTGCCCTCACTGTCATATaGAGCAATCATAAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELALTVI*SNHKVE
Trigger: CTCAACTTTATGATTGCTGCATATGACAGTGAGGGC...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCGCCCTCACTGTCATATaGAGCAATCATAAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGAALTVI*SNHKVE
Trigger: CTCAACTTTATGATTGCTGCATATGACAGTGAGGGC...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGAAAATACCGTCAACTTaGCTCGGCCCTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAKIPST*LGPHCH
Trigger: ATGACAGTGAGGGCCGAGGCAAGTTGACGGTATTTT...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGACATGGGCAAGCCTGTaGATGAGAGGTAGCCAGACA +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVTWASL*MRGSQT
Trigger: TGTCTGGCTACCTCTCATGCACAGGCTTGCCCATGT...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCAGGAGGAACTATATGTaGAAGGTCAAGTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLRRNYM*KVKWFL
Trigger: GAGAAACCACTTGACCTTGCACATATAGTTCCTCCT...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp CATGGTGTCATTCATATTAGTCAGAGGGCGAGGAGGAACTATATGTGCAAGGTCGTGGGCTGGGAGGCCTaGTCGTGTTCCAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: HGVIHISQRARRNYMCKVVGWEA*SCSRRR
Trigger: TCTCCGCCTGGAACACGAGCAGGCCTCCCAGCCCAC...GACCTTGCACATATAGTTCCTCCTCGCCCTCTGACTAATATGAATGACACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGAGGGCCGACATCCTCTaGTCCAGTTCATCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVRADIL*SSSSFL
Trigger: AAGGAAGGATGAACTGGAGCAGAGGATGTCGGCCCT...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TTGTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGGACGAGTCACGTTTCCTTCCCGCCTGCTCTCCTaGAGGGCCGACATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LLASKLKLKSVGGRVTFPSRLLS*RADILC
Trigger: GCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGA...AGGAAACGTGACTCGTCCTCCCACTGACTTGAGCTTTAACTTTGATGCCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTAGATGGAGAGGAATGTaGCTCTGGGGGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRARWRGM*LWGKTL
Trigger: CAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCAGATGGAGAGGAATGTaGCTCTGGGGGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVRWRGM*LWGKTL
Trigger: CAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTTTCAAAGACAGCTGTTaGGAGCTTCAGAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELFKDSC*ELQNFL
Trigger: AAGGAAGTTCTGAAGCTCCCAACAGCTGTCTTTGAA...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTTCAAAGACAGCTGTTaGGAGCTTCAGAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAFKDSC*ELQNFL
Trigger: AAGGAAGTTCTGAAGCTCCCAACAGCTGTCTTTGAA...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGTTCAAAGACAGCTGTTaGGAGCTTCAGAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATFKDSC*ELQNFL
Trigger: AAGGAAGTTCTGAAGCTCCCAACAGCTGTCTTTGAA...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCTGTGTAACCAAAAGATaGCCCTTCAAAGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFCVTKR*PFKDSC
Trigger: ACAGCTGTCTTTGAAGGGCCATCTTTTGGTTACACA...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGTGTGTAACCAAAAGATaGCCCTTCAAAGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATCVTKR*PFKDSC
Trigger: ACAGCTGTCTTTGAAGGGCCATCTTTTGGTTACACA...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCGATTTACTAATTGCATaGCTCAGCTTCTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSDLLIA*LSFFAG
Trigger: TCCTGCAAAGAAGCTGAGCCATGCAATTAGTAAATC...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCGTCAAGTGGTTTCTCTaGTTGCTCAGGAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSVKWFL*LLRKNR
Trigger: CCTGTTTTTCCTGAGCAACCAGAGAAACCACTTGAC...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGATGTGCAAGGTCAAGTaGTTTCTCTGGTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAMCKVK*FLWLLR
Trigger: CCTGAGCAACCAGAGAAACCACTTGACCTTGCACAT...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGTATGTGGTGACCCTGTaGCCTGAGCCTTCAGCAACT +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVYVVTL*PEPSAT
Trigger: AGTTGCTGAAGGCTCAGGCCACAGGGTCACCACATA...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000405222.5
ENST00000407186.5
CDS-3UTR CCA 90 bp CAGAACACTCTTGGTGGGAGTGGGCACTCCAGAGGACATGTGGCTAACCATGGTTATGTGGTGACCCTGTaGCCTGAGCCTTCAGCAACT +
Preference number: 4 (lower is better)
Translates to: QNTLGGSGHSRGHVANHGYVVTL*PEPSAT
Trigger: AGTTGCTGAAGGCTCAGGCCACAGGGTCACCACATA...ACCATGGTTAGCCACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGTGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356599.9
CDS-3UTR CCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTTATGTGGTGACCCTGTaGCCTGAGCCTTCAGCAACT +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRAYVVTL*PEPSAT
Trigger: AGTTGCTGAAGGCTCAGGCCACAGGGTCACCACATA...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000405222.5
ENST00000407186.5
CDS-3UTR CCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTCCTTCCTCTGCTGAATaGAGCTCCTTCACCAGGGAT +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRAPSSAE*SSFTRD
Trigger: ATCCCTGGTGAAGGAGCTCCATTCAGCAGAGGAAGG...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288642.12
ENST00000406818.7
ENST00000407186.5
CDS-3UTR CCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCCTTCCTCTGCTGAATaGAGCTCCTTCACCAGGGAT +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVPSSAE*SSFTRD
Trigger: ATCCCTGGTGAAGGAGCTCCATTCAGCAGAGGAAGG...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288642.12
ENST00000406818.7
ENST00000407186.5
CDS-3UTR CCA 90 bp TCCAGAACACTCTTGGTGGGAGTGGGCACTCCAGAGGACATGTGGCTAACCATGTGTGCGGTGGAAAGATaGAGAGGAATGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SRTLLVGVGTPEDMWLTMCAVER*RGMCLW
Trigger: CCAGAGGCACATTCCTCTCCATCTTTCCACCGCACA...CATGGTTAGCCACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGTGTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356599.9
CDS-3UTR CCA 90 bp ATGGAGTCAGCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTTGTGCGGTGGAAAGATaGAGAGGAATGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: MESAATSRSLRRFLLVPCCAVER*RGMCLW
Trigger: CCAGAGGCACATTCCTCTCCATCTTTCCACCGCACA...ACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGCTGACTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCTGTGCGGTGGAAAGATaGAGAGGAATGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVCAVER*RGMCLW
Trigger: CCAGAGGCACATTCCTCTCCATCTTTCCACCGCACA...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGGAGCACGCATTTCTATaGACAGCTGCCTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVEHAFL*TAASSL
Trigger: CAGAGAAGAGGCAGCTGTTCATAGAAATGCGTGCTC...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGATGACATCAAAATTCTaGGCACGCATTTCTATGAAC +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLMTSKF*ARISMN
Trigger: GTTCATAGAAATGCGTGCTCAGAATTTTGATGTCAT...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGCAGATATCAACAAGATaGAGGTTGCATCGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLQISTR*RLHRFC
Trigger: ACAAAAACGATGCAACCTTCATCTTGTTGATATCTG...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GATTTACTAATTGCATGGCTCAGCTTCTTTGCAGGAGATTTCCAAGAGGAATGCCCCTGGCGGGTGGAGTaGCGTCTGGCAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: DLLIAWLSFFAGDFQEECPWRVE*RLAACK
Trigger: CTTGCAGGCTGCCAGACGTCACTCCACCCGCCAGGG...GCATTCCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATGCAATTAGTAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR TCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGTTTTCAACCTCCAGGTaGATTCCTGATGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQFSTSR*IPDAEM
Trigger: CATCTCCGCATCAGGAATTCACCTGGAGGTTGAAAA...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCGTACAAATCGTAATTTaGAGGCTGTTCTGTAAGTTG +
Preference number: 4 (lower is better)
Translates to: GEECASGGRPCLRHVGASVQIVI*RLFCKL
Trigger: CAACTTACAGAACAGCCTGCAAATTACGATTTGTAC...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTACAAATCGTAATTTaGAGGCTGTTCTGTAAGTTG +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLVQIVI*RLFCKL
Trigger: CAACTTACAGAACAGCCTGCAAATTACGATTTGTAC...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCGCCCTCACTGTCATATaGAGCAATCATAAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSALTVI*SNHKVE
Trigger: CTCAACTTTATGATTGCTGCATATGACAGTGAGGGC...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCCCTCACTGTCATATaGAGCAATCATAAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLALTVI*SNHKVE
Trigger: CTCAACTTTATGATTGCTGCATATGACAGTGAGGGC...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGATTTCCAAGAGGAATaGTCCTTCATCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQDFQEE*SFIWCW
Trigger: CCAGCACCAGATGAAGGAGCATTCCTCTTGGAAATC...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGGAGGAACTATATGTaGAAGGTCAAGTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTRRNYM*KVKWFL
Trigger: GAGAAACCACTTGACCTTGCACATATAGTTCCTCCT...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCAGGAGGAACTATATGTaGAAGGTCAAGTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRRRNYM*KVKWFL
Trigger: GAGAAACCACTTGACCTTGCACATATAGTTCCTCCT...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAAGGAGGAACTATATGTaGAAGGTCAAGTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPRRNYM*KVKWFL
Trigger: GAGAAACCACTTGACCTTGCACATATAGTTCCTCCT...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCATATCATTAAGCCATTaGAATCTGACATCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSISLSH*NLTSGR
Trigger: TCTCCCAGATGTCAGATTCCAATGGCTTAATGATAT...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCATATCATTAAGCCATTaGAATCTGACATCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLISLSH*NLTSGR
Trigger: TCTCCCAGATGTCAGATTCCAATGGCTTAATGATAT...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTTCAAAGACAGCTGTTaGGAGCTTCAGAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSFKDSC*ELQNFL
Trigger: AAGGAAGTTCTGAAGCTCCCAACAGCTGTCTTTGAA...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTTTCAAAGACAGCTGTTaGGAGCTTCAGAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLFKDSC*ELQNFL
Trigger: AAGGAAGTTCTGAAGCTCCCAACAGCTGTCTTTGAA...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCTTCAAAGACAGCTGTTaGGAGCTTCAGAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRFKDSC*ELQNFL
Trigger: AAGGAAGTTCTGAAGCTCCCAACAGCTGTCTTTGAA...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CAGAACACTCTTGGTGGGAGTGGGCACTCCAGAGGACATGTGGCTAACCATGGTGAGCACTCCACGGGATaGAAGACATTCTCAACATGG +
Preference number: 4 (lower is better)
Translates to: QNTLGGSGHSRGHVANHGEHSTG*KTFSTW
Trigger: CCATGTTGAGAATGTCTTCCATCCCGTGGAGTGCTC...ACCATGGTTAGCCACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGTGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356599.9
CDS-3UTR CCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGAGCACTCCACGGGATaGAAGACATTCTCAACATGG +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVEHSTG*KTFSTW
Trigger: CCATGTTGAGAATGTCTTCCATCCCGTGGAGTGCTC...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGATTTACTAATTGCATaGCTCAGCTTCTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPDLLIA*LSFFAG
Trigger: TCCTGCAAAGAAGCTGAGCCATGCAATTAGTAAATC...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGATGTGCAAGGTCAAGTaGTTTCTCTGGTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSMCKVK*FLWLLR
Trigger: CCTGAGCAACCAGAGAAACCACTTGACCTTGCACAT...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGATGTGCAAGGTCAAGTaGTTTCTCTGGTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQMCKVK*FLWLLR
Trigger: CCTGAGCAACCAGAGAAACCACTTGACCTTGCACAT...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGCATCGGCCAAGTGACTaGGTATATCCTGGCTATACT +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSHRPSD*VYPGYT
Trigger: AGTATAGCCAGGATATACCCAGTCACTTGGCCGATG...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CCA 90 bp TCATTCATATTAGTCAGAGGGCGAGGAGGAACTATATGTGCAAGGTCAAGTGGTGTGCCTTCTCAGGGGTaGGCTGGGAGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: SFILVRGRGGTICARSSGVPSQG*AGRPAR
Trigger: ACGAGCAGGCCTCCCAGCCCACCCCTGAGAAGGCAC...ACCACTTGACCTTGCACATATAGTTCCTCCTCGCCCTCTGACTAATATGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp TGGCTAACCATGGTGTCATTCATATTAGTCAGAGGGCGAGGAGGAACTATATGTGGCCGGCCGCCTCCATaGGTGGGCGATGTATGTGGT +
Preference number: 4 (lower is better)
Translates to: WLTMVSFILVRGRGGTICGRPPP*VGDVCG
Trigger: ACCACATACATCGCCCACCCATGGAGGCGGCCGGCC...ACATATAGTTCCTCCTCGCCCTCTGACTAATATGAATGACACCATGGTTAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp TGGCTAACCATGGTGTCATTCATATTAGTCAGAGGGCGAGGAGGAACTATATGTCCTCTCCCTGGCGGGTaGAGTGACGTCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: WLTMVSFILVRGRGGTICPLPGG*SDVWQP
Trigger: AGGCTGCCAGACGTCACTCCACCCGCCAGGGAGAGG...ACATATAGTTCCTCCTCGCCCTCTGACTAATATGAATGACACCATGGTTAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR TCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGATGACATCAAAATTCTaGGCACGCATTTCTATGAAC +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATMTSKF*ARISMN
Trigger: GTTCATAGAAATGCGTGCTCAGAATTTTGATGTCAT...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCATGACATCAAAATTCTaGGCACGCATTTCTATGAAC +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGAMTSKF*ARISMN
Trigger: GTTCATAGAAATGCGTGCTCAGAATTTTGATGTCAT...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTAAGTTGATAGTCGTATaGCATCAAAATTCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELKLIVV*HQNSEH
Trigger: GTGCTCAGAATTTTGATGTCATACGACTATCAACTT...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTAAGTTGATAGTCGTATaGCATCAAAATTCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAKLIVV*HQNSEH
Trigger: GTGCTCAGAATTTTGATGTCATACGACTATCAACTT...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGCAGATATCAACAAGATaGAGGTTGCATCGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATQISTR*RLHRFC
Trigger: ACAAAAACGATGCAACCTTCATCTTGTTGATATCTG...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCAGATATCAACAAGATaGAGGTTGCATCGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQQISTR*RLHRFC
Trigger: ACAAAAACGATGCAACCTTCATCTTGTTGATATCTG...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTTCCACACTAATTTGGTaGGTAGAAGGAAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRASTLIW*VEGRRL
Trigger: CAAGCGCCTTCCTTCTACTCACCAAATTAGTGTGGA...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGAAAACAGGTGCGGACTaGGTGCTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVKTGAD*VLCVTK
Trigger: TTTGGTTACACAGAGCACTCAGTCCGCACCTGTTTT...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GCTAACCATGGTGTCATTCATATTAGTCAGAGGGCGAGGAGGAACTATATGTGCGGGCAAGCCTGTGCATaGGAGGTAGCCAGACAAGGC +
Preference number: 4 (lower is better)
Translates to: ANHGVIHISQRARRNYMCGQACA*EVARQG
Trigger: GCCTTGTCTGGCTACCTCTCATGCACAGGCTTGCCC...GCACATATAGTTCCTCCTCGCCCTCTGACTAATATGAATGACACCATGGTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGATTTCTATGAACAGCTaGCTCTTCTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQISMNS*LFSAMV
Trigger: GACCATGGCAGAGAAGAGGCAGCTGTTCATAGAAAT...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TCTGGTTGCTCAGGAAAAACAGGATGCGGGGGTTCTCTCGTGGGTACACACCCCATTTCTATGAACAGCTaGCTCTTCTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: SGCSGKTGCGGSLVGTHPISMNS*LFSAMV
Trigger: GACCATGGCAGAGAAGAGGCAGCTGTTCATAGAAAT...GGGGTGTGTACCCACGAGAGAACCCCCGCATCCTGTTTTTCCTGAGCAACCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCGTACAAATCGTAATTTaGAGGCTGTTCTGTAAGTTG +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGAVQIVI*RLFCKL
Trigger: CAACTTACAGAACAGCCTGCAAATTACGATTTGTAC...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTGTACAAATCGTAATTTaGAGGCTGTTCTGTAAGTTG +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELVQIVI*RLFCKL
Trigger: CAACTTACAGAACAGCCTGCAAATTACGATTTGTAC...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGTACAAATCGTAATTTaGAGGCTGTTCTGTAAGTTG +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAVQIVI*RLFCKL
Trigger: CAACTTACAGAACAGCCTGCAAATTACGATTTGTAC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCCAACAAGATGAAGGTTaGATCGTTTTTGTACAAATC +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLQQDEG*IVFVQI
Trigger: GATTTGTACAAAAACGATGCAACCTTCATCTTGTTG...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCAAAATACCGTCAACTTaGCTCGGCCCTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVKIPST*LGPHCH
Trigger: ATGACAGTGAGGGCCGAGGCAAGTTGACGGTATTTT...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGATTTCCAAGAGGAATaGTCCTTCATCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRADFQEE*SFIWCW
Trigger: CCAGCACCAGATGAAGGAGCATTCCTCTTGGAAATC...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTTTGTTTTCCAGTTCTaGAATAAGCTGTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLFVFQF*NKLSLL
Trigger: CAACAAAGACAGCTTATTGCAGAACTGGAAAACAAA...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCTTTGTTTTCCAGTTCTaGAATAAGCTGTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLFVFQF*NKLSLL
Trigger: CAACAAAGACAGCTTATTGCAGAACTGGAAAACAAA...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCTGATCTCGGTGGTATaGTCCAGTGTATTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVLISVV*SSVLRP
Trigger: TGGCCTTAATACACTGGACCATACCACCGAGATCAG...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCCTGATCTCGGTGGTATaGTCCAGTGTATTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVLISVV*SSVLRP
Trigger: TGGCCTTAATACACTGGACCATACCACCGAGATCAG...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCTTGGAATCTGACATCTaGGAGAAAACATATCTCAAT +
Preference number: 4 (lower is better)
Translates to: CASGGRPCLRHVGASLLLLESDI*EKTYLN
Trigger: ATTGAGATATGTTTTCTCCCAGATGTCAGATTCCAA...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTGGAATCTGACATCTaGGAGAAAACATATCTCAAT +
Preference number: 4 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSLESDI*EKTYLN
Trigger: ATTGAGATATGTTTTCTCCCAGATGTCAGATTCCAA...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTATATCATTAAGCCATTaGAATCTGACATCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELISLSH*NLTSGR
Trigger: TCTCCCAGATGTCAGATTCCAATGGCTTAATGATAT...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGATATCATTAAGCCATTaGAATCTGACATCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATISLSH*NLTSGR
Trigger: TCTCCCAGATGTCAGATTCCAATGGCTTAATGATAT...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCGATTTACTAATTGCATaGCTCAGCTTCTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRDLLIA*LSFFAG
Trigger: TCCTGCAAAGAAGCTGAGCCATGCAATTAGTAAATC...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGATTTACTAATTGCATaGCTCAGCTTCTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPDLLIA*LSFFAG
Trigger: TCCTGCAAAGAAGCTGAGCCATGCAATTAGTAAATC...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGTCAAGTGGTTTCTCTaGTTGCTCAGGAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSVKWFL*LLRKNR
Trigger: CCTGTTTTTCCTGAGCAACCAGAGAAACCACTTGAC...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGGACGAGTCACGTTTCCTGCCACTCTTGGTGGGAGTaGGCACTCCAGAGGACATGT +
Preference number: 4 (lower is better)
Translates to: VGIKVKAQVSGRTSHVSCHSWWE*ALQRTC
Trigger: ACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGTG...GCAGGAAACGTGACTCGTCCTCCCACTGACTTGAGCTTTAACTTTGATGCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356599.9
CDS-3UTR TCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAATGACATCAAAATTCTaGGCACGCATTTCTATGAAC +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPMTSKF*ARISMN
Trigger: GTTCATAGAAATGCGTGCTCAGAATTTTGATGTCAT...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTATGACATCAAAATTCTaGGCACGCATTTCTATGAAC +
Preference number: 4 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLMTSKF*ARISMN
Trigger: GTTCATAGAAATGCGTGCTCAGAATTTTGATGTCAT...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAAGTTGATAGTCGTATaGCATCAAAATTCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTKLIVV*HQNSEH
Trigger: GTGCTCAGAATTTTGATGTCATACGACTATCAACTT...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCAAGTTGATAGTCGTATaGCATCAAAATTCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRKLIVV*HQNSEH
Trigger: GTGCTCAGAATTTTGATGTCATACGACTATCAACTT...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCACAGATATCAACAAGATaGAGGTTGCATCGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPQISTR*RLHRFC
Trigger: ACAAAAACGATGCAACCTTCATCTTGTTGATATCTG...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TTCTCTGGTTGCTCAGGAAAAACAGGATGCGGGGGTTCTCTCGTGGGTACACACTCCACACTAATTTGGTaGGTAGAAGGAAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: FSGCSGKTGCGGSLVGTHSTLIW*VEGRRL
Trigger: CAAGCGCCTTCCTTCTACTCACCAAATTAGTGTGGA...GTGTGTACCCACGAGAGAACCCCCGCATCCTGTTTTTCCTGAGCAACCAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398951.6
CDS-3UTR TCA 90 bp GTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGGACGAGTCACGTTTCCTGCATGACATGGTGTTGGTaGTGGAGTCAGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: VGIKVKAQVSGRTSHVSCMTWCW*WSQLPP
Trigger: TGGTGGCAGCTGACTCCATCACCAACACCATGTCAT...GCAGGAAACGTGACTCGTCCTCCCACTGACTTGAGCTTTAACTTTGATGCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTCAACAAGATGAAGGTTaGATCGTTTTTGTACAAATC +
Preference number: 4 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCQQDEG*IVFVQI
Trigger: GATTTGTACAAAAACGATGCAACCTTCATCTTGTTG...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCCAACAAGATGAAGGTTaGATCGTTTTTGTACAAATC +
Preference number: 4 (lower is better)
Translates to: DGEECASGGRPCLRHVGAQQDEG*IVFVQI
Trigger: GATTTGTACAAAAACGATGCAACCTTCATCTTGTTG...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCAACAAGATGAAGGTTaGATCGTTTTTGTACAAATC +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFQQDEG*IVFVQI
Trigger: GATTTGTACAAAAACGATGCAACCTTCATCTTGTTG...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTCAACAAGATGAAGGTTaGATCGTTTTTGTACAAATC +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAQQDEG*IVFVQI
Trigger: GATTTGTACAAAAACGATGCAACCTTCATCTTGTTG...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCCCTCACTGTCATATaGAGCAATCATAAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSALTVI*SNHKVE
Trigger: CTCAACTTTATGATTGCTGCATATGACAGTGAGGGC...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TGGCTAACCATGGTGTCATTCATATTAGTCAGAGGGCGAGGAGGAACTATATGTTCATCTGGTGCTGGTTaGTGTGAGGGCCGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: WLTMVSFILVRGRGGTICSSGAG*CEGRRH
Trigger: ATGCCGGCGGCCCTCACAGCAACCAGCACCAGATGA...ACATATAGTTCCTCCTCGCCCTCTGACTAATATGAATGACACCATGGTTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTTTGTTTTCCAGTTCTaGAATAAGCTGTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAFVFQF*NKLSLL
Trigger: CAACAAAGACAGCTTATTGCAGAACTGGAAAACAAA...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTTTTGTTTTCCAGTTCTaGAATAAGCTGTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPFVFQF*NKLSLL
Trigger: CAACAAAGACAGCTTATTGCAGAACTGGAAAACAAA...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTTTTGTTTTCCAGTTCTaGAATAAGCTGTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELFVFQF*NKLSLL
Trigger: CAACAAAGACAGCTTATTGCAGAACTGGAAAACAAA...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TCTTTGTTGTTTGTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGGACGAGTTCTGGGGGAAGACCTTaGCTTCGCCATGTCGGCGCC +
Preference number: 4 (lower is better)
Translates to: SLLFVGIKVKAQVSGRTSSGGRP*LRHVGA
Trigger: GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA...ACTCGTCCTCCCACTGACTTGAGCTTTAACTTTGATGCCAACAAACAACAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCTTGGAATCTGACATCTaGGAGAAAACATATCTCAAT +
Preference number: 4 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFLESDI*EKTYLN
Trigger: ATTGAGATATGTTTTCTCCCAGATGTCAGATTCCAA...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTTTGGAATCTGACATCTaGGAGAAAACATATCTCAAT +
Preference number: 4 (lower is better)
Translates to: LAFAMSAPACSSSSVPELLESDI*EKTYLN
Trigger: ATTGAGATATGTTTTCTCCCAGATGTCAGATTCCAA...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGTTGGAATCTGACATCTaGGAGAAAACATATCTCAAT +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATLESDI*EKTYLN
Trigger: ATTGAGATATGTTTTCTCCCAGATGTCAGATTCCAA...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCATATCATTAAGCCATTaGAATCTGACATCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRISLSH*NLTSGR
Trigger: TCTCCCAGATGTCAGATTCCAATGGCTTAATGATAT...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCATATCATTAAGCCATTaGAATCTGACATCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSISLSH*NLTSGR
Trigger: TCTCCCAGATGTCAGATTCCAATGGCTTAATGATAT...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGACTTCCTTCAGAAACTaGTCAAACTTGCTAAATATC +
Preference number: 4 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATTSFRN*SNLLNI
Trigger: GATATTTAGCAAGTTTGACCAGTTTCTGAAGGAAGT...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTACTTCCTTCAGAAACTaGTCAAACTTGCTAAATATC +
Preference number: 4 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPATSFRN*SNLLNI
Trigger: GATATTTAGCAAGTTTGACCAGTTTCTGAAGGAAGT...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGACTTCCTTCAGAAACTaGTCAAACTTGCTAAATATC +
Preference number: 4 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQTSFRN*SNLLNI
Trigger: GATATTTAGCAAGTTTGACCAGTTTCTGAAGGAAGT...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCACTTCCTTCAGAAACTaGTCAAACTTGCTAAATATC +
Preference number: 4 (lower is better)
Translates to: ECASGGRPCLRHVGASLLTSFRN*SNLLNI
Trigger: GATATTTAGCAAGTTTGACCAGTTTCTGAAGGAAGT...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGTTCAAAGACAGCTGTTaGGAGCTTCAGAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSFKDSC*ELQNFL
Trigger: AAGGAAGTTCTGAAGCTCCCAACAGCTGTCTTTGAA...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGTGTGTAACCAAAAGATaGCCCTTCAAAGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQCVTKR*PFKDSC
Trigger: ACAGCTGTCTTTGAAGGGCCATCTTTTGGTTACACA...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTCAAGTGGTTTCTCTaGTTGCTCAGGAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRAVKWFL*LLRKNR
Trigger: CCTGTTTTTCCTGAGCAACCAGAGAAACCACTTGAC...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGGTCAAGTGGTTTCTCTaGTTGCTCAGGAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVVKWFL*LLRKNR
Trigger: CCTGTTTTTCCTGAGCAACCAGAGAAACCACTTGAC...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GATTTACTAATTGCATGGCTCAGCTTCTTTGCAGGAGATTTCCAAGAGGAATGCTTCTCAGGGGTGGGCTaGGAGGCCTGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: DLLIAWLSFFAGDFQEECFSGVG*EACSCS
Trigger: GGAACACGAGCAGGCCTCCCAGCCCACCCCTGAGAA...GCATTCCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATGCAATTAGTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp TCTTTGTTGTTTGTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGGACGAGTTTCTCAGGGGTGGGCTaGGAGGCCTGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SLLFVGIKVKAQVSGRTSFSGVG*EACSCS
Trigger: GGAACACGAGCAGGCCTCCCAGCCCACCCCTGAGAA...ACTCGTCCTCCCACTGACTTGAGCTTTAACTTTGATGCCAACAAACAACAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR TCA 90 bp CAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCTCCTGCACATGACATCAAAATTCTaGGCACGCATTTCTATGAAC +
Preference number: 4 (lower is better)
Translates to: QQVIAEVSPRTLCEGLLHMTSKF*ARISMN
Trigger: GTTCATAGAAATGCGTGCTCAGAATTTTGATGTCAT...GTGCAGGAGGCCTTCGCACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR TCA 90 bp TTGTTTGTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGGACGAGTCACGTTTCCAGGCGGAGACGCTaGATCTCCTGCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LFVGIKVKAQVSGRTSHVSRRRR*ISCRIS
Trigger: AGAGATCCTGCAGGAGATTCAGCGTCTCCGCCTGGA...AACGTGACTCGTCCTCCCACTGACTTGAGCTTTAACTTTGATGCCAACAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR TCA 90 bp TTGTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGGACGAGTCACGTTTCCTGCTCCTCTGCTAACCTaGATGGAGCTCCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: LLASKLKLKSVGGRVTFPAPLLT*MELLHQ
Trigger: CTGGTGAAGGAGCTCCATTCAGGTTAGCAGAGGAGC...AGGAAACGTGACTCGTCCTCCCACTGACTTGAGCTTTAACTTTGATGCCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp GCTAACCATGGTGTCATTCATATTAGTCAGAGGGCGAGGAGGAACTATATGTGCTTCCTCAATCATCCTTaGTCACTTCCCCGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: ANHGVIHISQRARRNYMCFLNHP*SLPRRS
Trigger: GCTCCGGCGGGGAAGTGAGCAAGGATGATTGAGGAA...GCACATATAGTTCCTCCTCGCCCTCTGACTAATATGAATGACACCATGGTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGCCCTCACTGTCATATaGAGCAATCATAAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRAALTVI*SNHKVE
Trigger: CTCAACTTTATGATTGCTGCATATGACAGTGAGGGC...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTTTGTTTTCCAGTTCTaGAATAAGCTGTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSFVFQF*NKLSLL
Trigger: CAACAAAGACAGCTTATTGCAGAACTGGAAAACAAA...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTTTGGAATCTGACATCTaGGAGAAAACATATCTCAAT +
Preference number: 4 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTLESDI*EKTYLN
Trigger: ATTGAGATATGTTTTCTCCCAGATGTCAGATTCCAA...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGTGTGTAACCAAAAGATaGCCCTTCAAAGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVCVTKR*PFKDSC
Trigger: ACAGCTGTCTTTGAAGGGCCATCTTTTGGTTACACA...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGATTTACTAATTGCATaGCTCAGCTTCTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQDLLIA*LSFFAG
Trigger: TCCTGCAAAGAAGCTGAGCCATGCAATTAGTAAATC...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CTAATTGCATGGCTCAGCTTCTTTGCAGGAGATTTCCAAGAGGAATGCTCCTTCACTGTAACCTCTTGGTaGGAGTGGGCACTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LIAWLSFFAGDFQEECSFTVTSW*EWALQR
Trigger: CCTCTGGAGTGCCCACTCCCACCAAGAGGTTACAGT...GAAGGAGCATTCCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATGCAATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398951.6
CDS-3UTR TCA 90 bp GTGATGGAGTCAGCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTATGACATCAAAATTCTaGGCACGCATTTCTATGAAC +
Preference number: 4 (lower is better)
Translates to: VMESAATSRSLRRFLLVPMTSKF*ARISMN
Trigger: GTTCATAGAAATGCGTGCTCAGAATTTTGATGTCAT...AGGTACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCAGCTGACTCCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR TCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGATGACATCAAAATTCTaGGCACGCATTTCTATGAAC +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSMTSKF*ARISMN
Trigger: GTTCATAGAAATGCGTGCTCAGAATTTTGATGTCAT...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp TCTGGTTGCTCAGGAAAAACAGGATGCGGGGGTTCTCTCGTGGGTACACACCCCCAGATATCAACAAGATaGAGGTTGCATCGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: SGCSGKTGCGGSLVGTHPQISTR*RLHRFC
Trigger: ACAAAAACGATGCAACCTTCATCTTGTTGATATCTG...GGGGTGTGTACCCACGAGAGAACCCCCGCATCCTGTTTTTCCTGAGCAACCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000398951.6
CDS-3UTR TCA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGCAGATATCAACAAGATaGAGGTTGCATCGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSQISTR*RLHRFC
Trigger: ACAAAAACGATGCAACCTTCATCTTGTTGATATCTG...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp ATGGCCACGCCAAAAGCAATTCTGGCAGAGCTGATAGTTGTGGCACTGCTGGCAAGGAGGAACTATATGTaGAAGGTCAAGTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: MATPKAILAELIVVALLARRNYM*KVKWFL
Trigger: GAGAAACCACTTGACCTTGCACATATAGTTCCTCCT...TGCCAGCAGTGCCACAACTATCAGCTCTGCCAGAATTGCTTTTGGCGTGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGACTTCCTTCAGAAACTaGTCAAACTTGCTAAATATC +
Preference number: 4 (lower is better)
Translates to: KMERNVPLGEDLAFAMSATSFRN*SNLLNI
Trigger: GATATTTAGCAAGTTTGACCAGTTTCTGAAGGAAGT...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGATTTACTAATTGCATaGCTCAGCTTCTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRADLLIA*LSFFAG
Trigger: TCCTGCAAAGAAGCTGAGCCATGCAATTAGTAAATC...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp TGGCTAACCATGGTGTCATTCATATTAGTCAGAGGGCGAGGAGGAACTATATGTAGAGGAATGTGCCTCTaGGGGAAGACCTTGCCTTCG +
Preference number: 4 (lower is better)
Translates to: WLTMVSFILVRGRGGTICRGMCL*GKTLPS
Trigger: CGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT...ACATATAGTTCCTCCTCGCCCTCTGACTAATATGAATGACACCATGGTTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
3UTR CAA 72 bp AGGAACTATATGTGCAAGGTCAAGTGGTTTCTCTGGTaGCTCAGGAAAAACAGGATGCGGGGGTTCTCTCGT +
Preference number: 4 (lower is better)
Translates to: RNYMCKVKWFLW*LRKNRMRGFSR
Trigger: ACGAGAGAACCCCCGCATCCTGTTTTTCCTGAGCAACCAGAGAAACCACTTGACCTTGCACATATAGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR TCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCATGACATCAAAATTCTaGGCACGCATTTCTATGAAC +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVMTSKF*ARISMN
Trigger: GTTCATAGAAATGCGTGCTCAGAATTTTGATGTCAT...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp CAGAACACTCTTGGTGGGAGTGGGCACTCCAGAGGACATGTGGCTAACCATGGTAAGTTGATAGTCGTATaGCATCAAAATTCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: QNTLGGSGHSRGHVANHGKLIVV*HQNSEH
Trigger: GTGCTCAGAATTTTGATGTCATACGACTATCAACTT...ACCATGGTTAGCCACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGTGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356599.9
CDS-3UTR TCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGAAGTTGATAGTCGTATaGCATCAAAATTCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVKLIVV*HQNSEH
Trigger: GTGCTCAGAATTTTGATGTCATACGACTATCAACTT...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTAAGTTGATAGTCGTATaGCATCAAAATTCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: EMRPCPEGSDEGASTCRAKLIVV*HQNSEH
Trigger: GTGCTCAGAATTTTGATGTCATACGACTATCAACTT...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR TCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGATATCAACAAGATaGAGGTTGCATCGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVQISTR*RLHRFC
Trigger: ACAAAAACGATGCAACCTTCATCTTGTTGATATCTG...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp TCCAGAACACTCTTGGTGGGAGTGGGCACTCCAGAGGACATGTGGCTAACCATGGTACAAATCGTAATTTaGAGGCTGTTCTGTAAGTTG +
Preference number: 4 (lower is better)
Translates to: SRTLLVGVGTPEDMWLTMVQIVI*RLFCKL
Trigger: CAACTTACAGAACAGCCTGCAAATTACGATTTGTAC...CATGGTTAGCCACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGTGTTCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356599.9
CDS-3UTR GCA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGGTACAAATCGTAATTTaGAGGCTGTTCTGTAAGTTG +
Preference number: 4 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVVQIVI*RLFCKL
Trigger: CAACTTACAGAACAGCCTGCAAATTACGATTTGTAC...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR GCA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGTTTGTTTTCCAGTTCTaGAATAAGCTGTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQFVFQF*NKLSLL
Trigger: CAACAAAGACAGCTTATTGCAGAACTGGAAAACAAA...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CACGCCAAAAGCAATTCTGGCAGAGCTGATAGTTGTGGCACTGCTGGCATCGGTGATTTACTAATTGCATaGCTCAGCTTCTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: HAKSNSGRADSCGTAGIGDLLIA*LSFFAG
Trigger: TCCTGCAAAGAAGCTGAGCCATGCAATTAGTAAATC...ACCGATGCCAGCAGTGCCACAACTATCAGCTCTGCCAGAATTGCTTTTGGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp TCTTTGTTGTTTGTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGGACGAGTACATGGGCAAGCCTGTaGATGAGAGGTAGCCAGACA +
Preference number: 4 (lower is better)
Translates to: SLLFVGIKVKAQVSGRTSTWASL*MRGSQT
Trigger: TGTCTGGCTACCTCTCATGCACAGGCTTGCCCATGT...ACTCGTCCTCCCACTGACTTGAGCTTTAACTTTGATGCCAACAAACAACAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp GCGAGCTATAAGACGGTGTTCCTCATCCAGTCGGCTAGGACTGTCCAGAACACGTTTGTTTTCCAGTTCTaGAATAAGCTGTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: ASYKTVFLIQSARTVQNTFVFQF*NKLSLL
Trigger: CAACAAAGACAGCTTATTGCAGAACTGGAAAACAAA...CGTGTTCTGGACAGTCCTAGCCGACTGGATGAGGAACACCGTCTTATAGCTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398951.6
CDS-3UTR CCA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCTTGGAATCTGACATCTaGGAGAAAACATATCTCAAT +
Preference number: 4 (lower is better)
Translates to: WKDGEECASGGRPCLRHVLESDI*EKTYLN
Trigger: ATTGAGATATGTTTTCTCCCAGATGTCAGATTCCAA...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CCA 90 bp CTAATTGCATGGCTCAGCTTCTTTGCAGGAGATTTCCAAGAGGAATGCTCCTTCCATCGGCCAAGTGACTaGGTATATCCTGGCTATACT +
Preference number: 4 (lower is better)
Translates to: LIAWLSFFAGDFQEECSFHRPSD*VYPGYT
Trigger: AGTATAGCCAGGATATACCCAGTCACTTGGCCGATG...GAAGGAGCATTCCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATGCAATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398951.6
CDS-3UTR CCA 90 bp TTGTTTGTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGGACGAGTCACGTTATGTGCAAGGTCAAGTaGTTTCTCTGGTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LFVGIKVKAQVSGRTSHVMCKVK*FLWLLR
Trigger: CCTGAGCAACCAGAGAAACCACTTGACCTTGCACAT...AACGTGACTCGTCCTCCCACTGACTTGAGCTTTAACTTTGATGCCAACAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp CATGGTGTCATTCATATTAGTCAGAGGGCGAGGAGGAACTATATGTGCAAGGTCAGGAGGAACTATATGTaGAAGGTCAAGTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: HGVIHISQRARRNYMCKVRRNYM*KVKWFL
Trigger: GAGAAACCACTTGACCTTGCACATATAGTTCCTCCT...GACCTTGCACATATAGTTCCTCCTCGCCCTCTGACTAATATGAATGACACCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CCA 90 bp TTGTTTGTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGGACGAGTCACGTTGTCAAGTGGTTTCTCTaGTTGCTCAGGAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: LFVGIKVKAQVSGRTSHVVKWFL*LLRKNR
Trigger: CCTGTTTTTCCTGAGCAACCAGAGAAACCACTTGAC...AACGTGACTCGTCCTCCCACTGACTTGAGCTTTAACTTTGATGCCAACAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR GCA 90 bp TGCATGGCTCAGCTTCTTTGCAGGAGATTTCCAAGAGGAATGCTCCTTCATCTGGTACAAATCGTAATTTaGAGGCTGTTCTGTAAGTTG +
Preference number: 4 (lower is better)
Translates to: CMAQLLCRRFPRGMLLHLVQIVI*RLFCKL
Trigger: CAACTTACAGAACAGCCTGCAAATTACGATTTGTAC...CAGATGAAGGAGCATTCCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CAA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGGCACTGGCATGGGCATaGGCCGGCCGCCTCCATGGG +
Preference number: 5 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLALAWA*AGRLHG
Trigger: CCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGC...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGCACTGGCATGGGCATaGGCCGGCCGCCTCCATGGG +
Preference number: 5 (lower is better)
Translates to: CASGGRPCLRHVGASLLLALAWA*AGRLHG
Trigger: CCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGC...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCGCACTGGCATGGGCATaGGCCGGCCGCCTCCATGGG +
Preference number: 5 (lower is better)
Translates to: GEECASGGRPCLRHVGASALAWA*AGRLHG
Trigger: CCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGC...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGCACTGGCATGGGCATaGGCCGGCCGCCTCCATGGG +
Preference number: 5 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAALAWA*AGRLHG
Trigger: CCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCGCACTGGCATGGGCATaGGCCGGCCGCCTCCATGGG +
Preference number: 5 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRALAWA*AGRLHG
Trigger: CCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGC...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTGCACTGGCATGGGCATaGGCCGGCCGCCTCCATGGG +
Preference number: 5 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTALAWA*AGRLHG
Trigger: CCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGC...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCCATGTCGGCGCCAGCTaGCTCCTCGTCCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLHVGAS*LLVLCA
Trigger: GGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATG...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGCTCTTCCAGCTGGACCATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCTCTGGGGGAAGACCTaGCCTTCGCCATGTCGGCGC +
Preference number: 5 (lower is better)
Translates to: SSSSWTISSRLLSCRADILWGKT*PSPCRR
Trigger: GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAG...GATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGGTCCAGCTGGAAGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CAA 90 bp ATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTGCTCTGGGGGAAGACCTaGCCTTCGCCATGTCGGCGC +
Preference number: 5 (lower is better)
Translates to: MGIGRPPPWVGDVCGDPVLWGKT*PSPCRR
Trigger: GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAG...CACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CAA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCCTCTGGGGGAAGACCTaGCCTTCGCCATGTCGGCGC +
Preference number: 5 (lower is better)
Translates to: CASGGRPCLRHVGASLLLLWGKT*PSPCRR
Trigger: GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAG...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS TCA 90 bp TGCGCCTTGAGTGAGGGCGGTCCCCCTCCTGCAGATGGTCTGCTTTaGAAAGCCCTGCGCTTGCTCACCCGAGGCTCGAGCACTGCCTGG +
Preference number: 5 (lower is better)
Translates to: CALSEGGPPPADGLL*KALRLLTRGSSTAW
Trigger: CCAGGCAGTGCTCGAGCCTCGGGTGAGCAAGCGCAGGGCTTTTCAAAGCAGACCATCTGCAGGAGGGGGACCGCCCTCACTCAAGGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS CCA 90 bp ACGTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTaGGCGATGTATGTGGTGACCCTGTGGCCTGAGCTGCCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: TWSALAWALAGRLHG*AMYVVTLWPELPAF
Trigger: AAAAGCAGGCAGCTCAGGCCACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
ENST00000495466.6
CDS CCA 90 bp GGGCGCGGGCAAGGCAGGGGAGGCCAGGAAGCTGGCTGGGAGCTCTaGGTTTCACCTGAATGGAGCTCCTTCACCAGGGATGACATGGTG +
Preference number: 5 (lower is better)
Translates to: GRGQGRGGQEAGWEL*VSPEWSSFTRDDMV
Trigger: CACCATGTCATCCCTGGTGAAGGAGCTCCATTCAGGTGAAACCCAGAGCTCCCAGCCAGCTTCCTGGCCTCCCCTGCCTTGCCCGCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479898.5
ENST00000498437.1
CDS CCA 90 bp ACGTGGAGCGCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTaGGCGATGTATGTGGTGACCCTGTGGCCTGAGCCTGGAGATTCA +
Preference number: 5 (lower is better)
Translates to: TWSALAWALAGRLHG*AMYVVTLWPEPGDS
Trigger: TGAATCTCCAGGCTCAGGCCACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGCGCTCCACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498437.1
CDS-3UTR CAA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTCATGTCGGCGCCAGCTaGCTCCTCGTCCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCHVGAS*LLVLCA
Trigger: GGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATG...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCATGTCGGCGCCAGCTaGCTCCTCGTCCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFHVGAS*LLVLCA
Trigger: GGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATG...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGCATGTCGGCGCCAGCTaGCTCCTCGTCCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATHVGAS*LLVLCA
Trigger: GGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATG...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCCTCTGGGGGAAGACCTaGCCTTCGCCATGTCGGCGC +
Preference number: 5 (lower is better)
Translates to: DGEECASGGRPCLRHVGALWGKT*PSPCRR
Trigger: GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAG...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCTGGGGGAAGACCTaGCCTTCGCCATGTCGGCGC +
Preference number: 5 (lower is better)
Translates to: ECASGGRPCLRHVGASLLLWGKT*PSPCRR
Trigger: GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAG...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTCTCTGGGGGAAGACCTaGCCTTCGCCATGTCGGCGC +
Preference number: 5 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPALWGKT*PSPCRR
Trigger: GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAG...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGCACTGGCATGGGCATaGGCCGGCCGCCTCCATGGG +
Preference number: 5 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQALAWA*AGRLHG
Trigger: CCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGC...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTCATGTCGGCGCCAGCTaGCTCCTCGTCCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLHVGAS*LLVLCA
Trigger: GGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATG...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS TCA 90 bp CATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTaGCCCTGTGGCCTGAGCTGCCTGCTTTTGCTCTTCCTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: HGHWPAASMGGRCMW*PCGLSCLLLLFLLQ
Trigger: CTGAAGGAGGAAGAGCAAAAGCAGGCAGCTCAGGCCACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
ENST00000495466.6
CDS-3UTR CAA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCCAGTTCATCCTTCCTTaGCCTCAGCAGCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: CASGGRPCLRHVGASLLLQFILP*PQQPQL
Trigger: GAGCTGCGGCTGCTGAGGCAAAGGAAGGATGAACTG...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCCAGTTCATCCTTCCTTaGCCTCAGCAGCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSQFILP*PQQPQL
Trigger: GAGCTGCGGCTGCTGAGGCAAAGGAAGGATGAACTG...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTGGCCACCAGCAGGTCATaGCGGAGGTTTCTCCTCGTA +
Preference number: 5 (lower is better)
Translates to: MGIGRPPPWVGDVCGDPVATSRS*RRFLLV
Trigger: TACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGC...CACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CAA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGGCCACCAGCAGGTCATaGCGGAGGTTTCTCCTCGTA +
Preference number: 5 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLATSRS*RRFLLV
Trigger: TACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGC...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp CAGCTGGACCATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCTCTGCTCAGGGATGACATGGTGTaGGTGATGGAGTCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: QLDHQLPPALLQGRHPLLRDDMV*VMESAA
Trigger: GGCAGCTGACTCCATCACCAACACCATGTCATCCCT...GAGCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGGTCCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CAA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGCTGTCCAGAACACTCTaGGTGGGAGTGGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLLSRTL*VGVGTP
Trigger: TGGAGTGCCCACTCCCACCAAGAGTGTTCTGGACAG...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356599.9
ENST00000405222.5
ENST00000407038.7
ENST00000407186.5
CDS-3UTR CAA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCCTGTCCAGAACACTCTaGGTGGGAGTGGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLLSRTL*VGVGTP
Trigger: TGGAGTGCCCACTCCCACCAAGAGTGTTCTGGACAG...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356599.9
ENST00000405222.5
ENST00000407038.7
ENST00000407186.5
CDS-3UTR CAA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGTGCACCTTCCTCTGCTaGTGCGAAGGCCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQCTFLC*CEGLLH
Trigger: GTGCAGGAGGCCTTCGCACAAGCAGAGGAAGGTGCA...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404103.7
ENST00000405222.5
ENST00000407038.7
CDS-3UTR CAA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCTGCACCTTCCTCTGCTaGTGCGAAGGCCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFCTFLC*CEGLLH
Trigger: GTGCAGGAGGCCTTCGCACAAGCAGAGGAAGGTGCA...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404103.7
ENST00000405222.5
ENST00000407038.7
CDS-3UTR CAA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTCAGTTCATCCTTCCTTaGCCTCAGCAGCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAQFILP*PQQPQL
Trigger: GAGCTGCGGCTGCTGAGGCAAAGGAAGGATGAACTG...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGCAGTTCATCCTTCCTTaGCCTCAGCAGCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATQFILP*PQQPQL
Trigger: GAGCTGCGGCTGCTGAGGCAAAGGAAGGATGAACTG...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGTTTCTCCTCGTACCTaGTGCGAAGGCCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPVSPRT*CEGLLH
Trigger: GTGCAGGAGGCCTTCGCACAAGGTACGAGGAGAAAC...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGTTTCTCCTCGTACCTaGTGCGAAGGCCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAVSPRT*CEGLLH
Trigger: GTGCAGGAGGCCTTCGCACAAGGTACGAGGAGAAAC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGCCACCAGCAGGTCATaGCGGAGGTTTCTCCTCGTA +
Preference number: 5 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPATSRS*RRFLLV
Trigger: TACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGC...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCGCCACCAGCAGGTCATaGCGGAGGTTTCTCCTCGTA +
Preference number: 5 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFATSRS*RRFLLV
Trigger: TACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGC...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCAGGGATGACATGGTGTaGGTGATGGAGTCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSRDDMV*VMESAA
Trigger: GGCAGCTGACTCCATCACCAACACCATGTCATCCCT...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGAGGGATGACATGGTGTaGGTGATGGAGTCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLRDDMV*VMESAA
Trigger: GGCAGCTGACTCCATCACCAACACCATGTCATCCCT...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGCATGTCGGCGCCAGCTaGCTCCTCGTCCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQHVGAS*LLVLCA
Trigger: GGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATG...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGCTCTGGGGGAAGACCTaGCCTTCGCCATGTCGGCGC +
Preference number: 5 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQLWGKT*PSPCRR
Trigger: GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAG...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTGTCCAGAACACTCTaGGTGGGAGTGGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: ECASGGRPCLRHVGASLLLSRTL*VGVGTP
Trigger: TGGAGTGCCCACTCCCACCAAGAGTGTTCTGGACAG...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356599.9
ENST00000405222.5
ENST00000407038.7
ENST00000407186.5
CDS GCA 90 bp GGGCAAAGCCCACTCAGCTCTGAAAGTTCCCCAAGGGAACATGACTaGGCCTTGAGTGAGGGCGGTCCCCCTCCTGCAGATGGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: GQSPLSSESSPREHD*ALSEGGPPPADGLL
Trigger: AAGCAGACCATCTGCAGGAGGGGGACCGCCCTCACTCAAGGCGCAGTCATGTTCCCTTGGGGAACTTTCAGAGCTGAGTGGGCTTTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS CCA 90 bp TTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTaGCCTGAGCTGCCTGCTTTTGCTCTTCCTCCTTCAGCAACTTCA +
Preference number: 5 (lower is better)
Translates to: LAGRLHGWAMYVVTL*PELPAFALPPSATS
Trigger: TGAAGTTGCTGAAGGAGGAAGAGCAAAAGCAGGCAGCTCAGGCCACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
ENST00000495466.6
CDS-3UTR CAA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCTTTCCTCAATCATCCTaGCTCACTTCCCCGCCGGAG +
Preference number: 5 (lower is better)
Translates to: ECASGGRPCLRHVGASLLFPQSS*LTSPPE
Trigger: CTCCGGCGGGGAAGTGAGCAAGGATGATTGAGGAAA...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTTTTCCTCAATCATCCTaGCTCACTTCCCCGCCGGAG +
Preference number: 5 (lower is better)
Translates to: LAFAMSAPACSSSSVPELFPQSS*LTSPPE
Trigger: CTCCGGCGGGGAAGTGAGCAAGGATGATTGAGGAAA...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTGGCCATGGTCTTCCGCTaGTTCCCACTTTCCTCAATC +
Preference number: 5 (lower is better)
Translates to: MGIGRPPPWVGDVCGDPVAMVFR*FPLSSI
Trigger: GATTGAGGAAAGTGGGAACAAGCGGAAGACCATGGC...CACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CAA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCGCCATGGTCTTCCGCTaGTTCCCACTTTCCTCAATC +
Preference number: 5 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSAMVFR*FPLSSI
Trigger: GATTGAGGAAAGTGGGAACAAGCGGAAGACCATGGC...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCGAAAATACCGTCAACTaGCCTCGGCCCTCACTGTCA +
Preference number: 5 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSENTVN*PRPSLS
Trigger: TGACAGTGAGGGCCGAGGCAAGTTGACGGTATTTTC...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCGAAAATACCGTCAACTaGCCTCGGCCCTCACTGTCA +
Preference number: 5 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLENTVN*PRPSLS
Trigger: TGACAGTGAGGGCCGAGGCAAGTTGACGGTATTTTC...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTAGGGATGACATGGTGTaGGTGATGGAGTCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPARDDMV*VMESAA
Trigger: GGCAGCTGACTCCATCACCAACACCATGTCATCCCT...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCTCTGGGGGAAGACCTaGCCTTCGCCATGTCGGCGC +
Preference number: 5 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVLWGKT*PSPCRR
Trigger: GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAG...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTCTCTGGGGGAAGACCTaGCCTTCGCCATGTCGGCGC +
Preference number: 5 (lower is better)
Translates to: EMRPCPEGSDEGASTCRALWGKT*PSPCRR
Trigger: GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAG...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGTGCACCTTCCTCTGCTaGTGCGAAGGCCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: KMERNVPLGEDLAFAMSACTFLC*CEGLLH
Trigger: GTGCAGGAGGCCTTCGCACAAGCAGAGGAAGGTGCA...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404103.7
ENST00000405222.5
ENST00000407038.7
CDS-3UTR CAA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCCTGAGCTGCCTGCTTTaGCTCTTCCTCCTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSLSCLL*LFLLQQ
Trigger: TTGCTGAAGGAGGAAGAGCAAAAGCAGGCAGCTCAG...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
CDS-3UTR CAA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCGCCATGGTCTTCCGCTaGTTCCCACTTTCCTCAATC +
Preference number: 5 (lower is better)
Translates to: DGEECASGGRPCLRHVGAAMVFR*FPLSSI
Trigger: GATTGAGGAAAGTGGGAACAAGCGGAAGACCATGGC...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGCCATGGTCTTCCGCTaGTTCCCACTTTCCTCAATC +
Preference number: 5 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAAMVFR*FPLSSI
Trigger: GATTGAGGAAAGTGGGAACAAGCGGAAGACCATGGC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTGAAAATACCGTCAACTaGCCTCGGCCCTCACTGTCA +
Preference number: 5 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCENTVN*PRPSLS
Trigger: TGACAGTGAGGGCCGAGGCAAGTTGACGGTATTTTC...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGGAAAATACCGTCAACTaGCCTCGGCCCTCACTGTCA +
Preference number: 5 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQENTVN*PRPSLS
Trigger: TGACAGTGAGGGCCGAGGCAAGTTGACGGTATTTTC...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCGAAAATACCGTCAACTaGCCTCGGCCCTCACTGTCA +
Preference number: 5 (lower is better)
Translates to: ECASGGRPCLRHVGASLLENTVN*PRPSLS
Trigger: TGACAGTGAGGGCCGAGGCAAGTTGACGGTATTTTC...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGAAAATACCGTCAACTaGCCTCGGCCCTCACTGTCA +
Preference number: 5 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAENTVN*PRPSLS
Trigger: TGACAGTGAGGGCCGAGGCAAGTTGACGGTATTTTC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCCATGGCTCAGCTTCTTaGCAGGAGATTTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: GEECASGGRPCLRHVGASHGSAS*QEISKR
Trigger: CCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATG...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCTATACTGTAACCTCTaGGTGGGAGTGGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: LAFAMSAPACSSSSVPELLYCNL*VGVGTP
Trigger: TGGAGTGCCCACTCCCACCAAGAGGTTACAGTATAG...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CAA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTATACTGTAACCTCTaGGTGGGAGTGGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFLYCNL*VGVGTP
Trigger: TGGAGTGCCCACTCCCACCAAGAGGTTACAGTATAG...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CAA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTATACTGTAACCTCTaGGTGGGAGTGGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQLYCNL*VGVGTP
Trigger: TGGAGTGCCCACTCCCACCAAGAGGTTACAGTATAG...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CAA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCCTATACTGTAACCTCTaGGTGGGAGTGGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: DGEECASGGRPCLRHVGALYCNL*VGVGTP
Trigger: TGGAGTGCCCACTCCCACCAAGAGGTTACAGTATAG...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CAA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCAGTTCATCCTTCCTTaGCCTCAGCAGCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAQFILP*PQQPQL
Trigger: GAGCTGCGGCTGCTGAGGCAAAGGAAGGATGAACTG...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGGACGAGTCACGTTTCCTGCGCACTGGCATGGGCATaGGCCGGCCGCCTCCATGGG +
Preference number: 5 (lower is better)
Translates to: VGIKVKAQVSGRTSHVSCALAWA*AGRLHG
Trigger: CCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGC...GCAGGAAACGTGACTCGTCCTCCCACTGACTTGAGCTTTAACTTTGATGCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CAA 90 bp AGAGGGCGAGGAGGAACTATATGTGCAAGGTCAAGTGGTTTCTCTGGTTGCTCAGCACTGGCATGGGCATaGGCCGGCCGCCTCCATGGG +
Preference number: 5 (lower is better)
Translates to: RGRGGTICARSSGFSGCSALAWA*AGRLHG
Trigger: CCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGC...TGAGCAACCAGAGAAACCACTTGACCTTGCACATATAGTTCCTCCTCGCCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CAA 90 bp CAGCAGGTCATTGCGGAGGTTTCTCCTCGTACCTTGTGCGAAGGCCTCCTGCACGCCACCAGCAGGTCATaGCGGAGGTTTCTCCTCGTA +
Preference number: 5 (lower is better)
Translates to: QQVIAEVSPRTLCEGLLHATSRS*RRFLLV
Trigger: TACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGC...GTGCAGGAGGCCTTCGCACAAGGTACGAGGAGAAACCTCCGCAATGACCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CAA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGGCCACCAGCAGGTCATaGCGGAGGTTTCTCCTCGTA +
Preference number: 5 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAATSRS*RRFLLV
Trigger: TACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGC...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCAGGGATGACATGGTGTaGGTGATGGAGTCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSRDDMV*VMESAA
Trigger: GGCAGCTGACTCCATCACCAACACCATGTCATCCCT...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000406818.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCTGTCCAGAACACTCTaGGTGGGAGTGGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: KMERNVPLGEDLAFAMSALSRTL*VGVGTP
Trigger: TGGAGTGCCCACTCCCACCAAGAGTGTTCTGGACAG...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356599.9
ENST00000405222.5
ENST00000407038.7
ENST00000407186.5
CDS-3UTR CAA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGAGCTGCCTGCTTTaGCTCTTCCTCCTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQLSCLL*LFLLQQ
Trigger: TTGCTGAAGGAGGAAGAGCAAAAGCAGGCAGCTCAG...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
CDS TCA 90 bp CATGGGCATTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTaGCCCTGTGGCCTGAGCCTGGAGATTCAAAGACAGAAAATACGT +
Preference number: 5 (lower is better)
Translates to: HGHWPAASMGGRCMW*PCGLSLEIQRQKIR
Trigger: ACGTATTTTCTGTCTTTGAATCTCCAGGCTCAGGCCACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498437.1
CDS GCA 90 bp CTGAGGGCCATTGCTGTCCAGCCTTGCACCAGGGCTCTTTATGGATaGAAACTGGATTTACAGCCCCCACACCGGGATGGCAGGGTATGG +
Preference number: 5 (lower is better)
Translates to: LRAIAVQPCTRALYG*KLDLQPPHRDGRVW
Trigger: CCATACCCTGCCATCCCGGTGTGGGGGCTGTAAATCCAGTTTGCATCCATAAAGAGCCCTGGTGCAAGGCTGGACAGCAATGGCCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS CCA 90 bp GCATCCTCGTCTCGGGACACTTCTTTCCTGTCCAGGGTGACCTCCTaGACAGGTTCGCTATTAGGCGCCTCGGGAAACAGTGATTTGGGG +
Preference number: 5 (lower is better)
Translates to: ASSSRDTSFLSRVTS*TGSLLGASGNSDLG
Trigger: CCCCAAATCACTGTTTCCCGAGGCGCCTAATAGCGAACCTGTCCAGGAGGTCACCCTGGACAGGAAAGAAGTGTCCCGAGACGAGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349996.6
CDS CCA 90 bp AGGGGAGGCCAGGAAGCTGGCTGGGAGCTCTGGGTTTCACCTGAATaGAGCTCCTTCACCAGGGATGACATGGTGTTGGTGATGGAGTCA +
Preference number: 5 (lower is better)
Translates to: RGGQEAGWELWVSPE*SSFTRDDMVLVMES
Trigger: TGACTCCATCACCAACACCATGTCATCCCTGGTGAAGGAGCTCCATTCAGGTGAAACCCAGAGCTCCCAGCCAGCTTCCTGGCCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479898.5
ENST00000498437.1
CDS CCA 90 bp CCATTGCTGTCCAGCCTTGCACCAGGGCTCTTTATGGATGCAAACTaGATTTACAGCCCCCACACCGGGATGGCAGGGTATGGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: PLLSSLAPGLFMDAN*IYSPHTGMAGYGRG
Trigger: TCCCCTCCCATACCCTGCCATCCCGGTGTGGGGGCTGTAAATCCAGTTTGCATCCATAAAGAGCCCTGGTGCAAGGCTGGACAGCAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS-3UTR CAA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTGCCATGGTCTTCCGCTaGTTCCCACTTTCCTCAATC +
Preference number: 5 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTAMVFR*FPLSSI
Trigger: GATTGAGGAAAGTGGGAACAAGCGGAAGACCATGGC...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCGCCATGGTCTTCCGCTaGTTCCCACTTTCCTCAATC +
Preference number: 5 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRAMVFR*FPLSSI
Trigger: GATTGAGGAAAGTGGGAACAAGCGGAAGACCATGGC...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCGCCATGGTCTTCCGCTaGTTCCCACTTTCCTCAATC +
Preference number: 5 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSAMVFR*FPLSSI
Trigger: GATTGAGGAAAGTGGGAACAAGCGGAAGACCATGGC...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GCTCTTCCAGCTGGACCATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCTTGTTCCACACTAATTaGGTGAGTAGAAGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: ALPAGPSAPACSPAGPTSLFHTN*VSRRKA
Trigger: CGCCTTCCTTCTACTCACCAAATTAGTGTGGAACAA...GGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGGTCCAGCTGGAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398951.6
CDS-3UTR CAA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCATGGCTCAGCTTCTTaGCAGGAGATTTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: ECASGGRPCLRHVGASLLHGSAS*QEISKR
Trigger: CCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATG...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCTATACTGTAACCTCTaGGTGGGAGTGGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRLYCNL*VGVGTP
Trigger: TGGAGTGCCCACTCCCACCAAGAGGTTACAGTATAG...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000406818.7
ENST00000407661.7
CDS-3UTR CAA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGCAGTTCATCCTTCCTTaGCCTCAGCAGCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQQFILP*PQQPQL
Trigger: GAGCTGCGGCTGCTGAGGCAAAGGAAGGATGAACTG...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGCAGTTCATCCTTCCTTaGCCTCAGCAGCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSQFILP*PQQPQL
Trigger: GAGCTGCGGCTGCTGAGGCAAAGGAAGGATGAACTG...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS TCA 90 bp CCTCTGCTGAATGGAGCTCCTTCACCAGGGATGACATGGTGTTGGTaGTGGAGTCAGCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: PLLNGAPSPGMTWCW*WSQLPPAGHCGGFS
Trigger: GGAGAAACCTCCGCAATGACCTGCTGGTGGCAGCTGACTCCATCACCAACACCATGTCATCCCTGGTGAAGGAGCTCCATTCAGCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288642.12
ENST00000406818.7
ENST00000407186.5
CDS CCA 90 bp TTCTCTGAGGGCCATTGCTGTCCAGCCTTGCACCAGGGCTCTTTATaGATGCAAACTGGATTTACAGCCCCCACACCGGGATGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: FSEGHCCPALHQGSL*MQTGFTAPTPGWQG
Trigger: ACCCTGCCATCCCGGTGTGGGGGCTGTAAATCCAGTTTGCATCCATAAAGAGCCCTGGTGCAAGGCTGGACAGCAATGGCCCTCAGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS-3UTR CAA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGTTTCCTCAATCATCCTaGCTCACTTCCCCGCCGGAG +
Preference number: 5 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQFPQSS*LTSPPE
Trigger: CTCCGGCGGGGAAGTGAGCAAGGATGATTGAGGAAA...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGTTTCCTCAATCATCCTaGCTCACTTCCCCGCCGGAG +
Preference number: 5 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSFPQSS*LTSPPE
Trigger: CTCCGGCGGGGAAGTGAGCAAGGATGATTGAGGAAA...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGGCCATGGTCTTCCGCTaGTTCCCACTTTCCTCAATC +
Preference number: 5 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAAMVFR*FPLSSI
Trigger: GATTGAGGAAAGTGGGAACAAGCGGAAGACCATGGC...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGAGTGTATTAAGGCCATaGTCTCGGAAGGCTTCAATC +
Preference number: 5 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLSVLRP*SRKASI
Trigger: GATTGAAGCCTTCCGAGACAATGGCCTTAATACACT...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTTGTTCCACACTAATTaGGTGAGTAGAAGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLLFHTN*VSRRKA
Trigger: CGCCTTCCTTCTACTCACCAAATTAGTGTGGAACAA...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCGAGGAGGCTGATAGATaGTTCCACACTAATTTGGTG +
Preference number: 5 (lower is better)
Translates to: GEECASGGRPCLRHVGASEEADR*FHTNLV
Trigger: CACCAAATTAGTGTGGAACAATCTATCAGCCTCCTC...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGCTCTTCCAGCTGGACCATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCGAGGAGGCTGATAGATaGTTCCACACTAATTTGGTG +
Preference number: 5 (lower is better)
Translates to: SSSSWTISSRLLSCRADIEEADR*FHTNLV
Trigger: CACCAAATTAGTGTGGAACAATCTATCAGCCTCCTC...GATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGGTCCAGCTGGAAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398951.6
CDS-3UTR CAA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCGAGGAGGCTGATAGATaGTTCCACACTAATTTGGTG +
Preference number: 5 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSEEADR*FHTNLV
Trigger: CACCAAATTAGTGTGGAACAATCTATCAGCCTCCTC...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGGCAGCAATCATAAAGTaGAGGAGGAGGCTGATAGAT +
Preference number: 5 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLAAIIK*RRRLID
Trigger: ATCTATCAGCCTCCTCCTCAACTTTATGATTGCTGC...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTCTTCAAAGACAGCTGTaGGGAGCTTCAGAACTTCCT +
Preference number: 5 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPALQRQL*GASELP
Trigger: AGGAAGTTCTGAAGCTCCCAACAGCTGTCTTTGAAG...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTCTTCAAAGACAGCTGTaGGGAGCTTCAGAACTTCCT +
Preference number: 5 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCLQRQL*GASELP
Trigger: AGGAAGTTCTGAAGCTCCCAACAGCTGTCTTTGAAG...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTTCAAAGACAGCTGTaGGGAGCTTCAGAACTTCCT +
Preference number: 5 (lower is better)
Translates to: ECASGGRPCLRHVGASLLLQRQL*GASELP
Trigger: AGGAAGTTCTGAAGCTCCCAACAGCTGTCTTTGAAG...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTCATGGCTCAGCTTCTTaGCAGGAGATTTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLHGSAS*QEISKR
Trigger: CCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATG...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTCATGGCTCAGCTTCTTaGCAGGAGATTTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTHGSAS*QEISKR
Trigger: CCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATG...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGCTCTTCCAGCTGGACCATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCAAGTGGTTTCTCTGGTaGCTCAGGAAAAACAGGATG +
Preference number: 5 (lower is better)
Translates to: SSSSWTISSRLLSCRADIKWFLW*LRKNRM
Trigger: CATCCTGTTTTTCCTGAGCAACCAGAGAAACCACTT...GATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGATGGTCCAGCTGGAAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CAA 90 bp GGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCAAGTGGTTTCTCTGGTaGCTCAGGAAAAACAGGATG +
Preference number: 5 (lower is better)
Translates to: GEECASGGRPCLRHVGASKWFLW*LRKNRM
Trigger: CATCCTGTTTTTCCTGAGCAACCAGAGAAACCACTT...GCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCAAGTGGTTTCTCTGGTaGCTCAGGAAAAACAGGATG +
Preference number: 5 (lower is better)
Translates to: CASGGRPCLRHVGASLLLKWFLW*LRKNRM
Trigger: CATCCTGTTTTTCCTGAGCAACCAGAGAAACCACTT...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCAAGTGGTTTCTCTGGTaGCTCAGGAAAAACAGGATG +
Preference number: 5 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSKWFLW*LRKNRM
Trigger: CATCCTGTTTTTCCTGAGCAACCAGAGAAACCACTT...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGAGGGCGAGGAGGAACTATATGTGCAAGGTCAAGTGGTTTCTCTGGTTGCTCACATGTCGGCGCCAGCTaGCTCCTCGTCCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: RGRGGTICARSSGFSGCSHVGAS*LLVLCA
Trigger: GGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATG...TGAGCAACCAGAGAAACCACTTGACCTTGCACATATAGTTCCTCCTCGCCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CAA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCTGAGCTGCCTGCTTTaGCTCTTCCTCCTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: KMERNVPLGEDLAFAMSALSCLL*LFLLQQ
Trigger: TTGCTGAAGGAGGAAGAGCAAAAGCAGGCAGCTCAG...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
CDS-3UTR CAA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCCATGGTCTTCCGCTaGTTCCCACTTTCCTCAATC +
Preference number: 5 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSAMVFR*FPLSSI
Trigger: GATTGAGGAAAGTGGGAACAAGCGGAAGACCATGGC...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCTGTGCCACGAGTGTATTAAGGCCATaGTCTCGGAAGGCTTCAATC +
Preference number: 5 (lower is better)
Translates to: KVLVHAGLCRGRPTSCATSVLRP*SRKASI
Trigger: GATTGAAGCCTTCCGAGACAATGGCCTTAATACACT...CGTGGCACAGCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCTCTGCTCCAGTTCATCCAGTGTATTAAGGCCATaGTCTCGGAAGGCTTCAATC +
Preference number: 5 (lower is better)
Translates to: ISSRLLSCRADILCSSSSSVLRP*SRKASI
Trigger: GATTGAAGCCTTCCGAGACAATGGCCTTAATACACT...GGATGAACTGGAGCAGAGGATGTCGGCCCTGCAGGAGAGCAGGCGGGAGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398951.6
CDS-3UTR CAA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGTGTATTAAGGCCATaGTCTCGGAAGGCTTCAATC +
Preference number: 5 (lower is better)
Translates to: DGEECASGGRPCLRHVGASVLRP*SRKASI
Trigger: GATTGAAGCCTTCCGAGACAATGGCCTTAATACACT...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTTTGTTCCACACTAATTaGGTGAGTAGAAGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCLFHTN*VSRRKA
Trigger: CGCCTTCCTTCTACTCACCAAATTAGTGTGGAACAA...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTGAGGAGGCTGATAGATaGTTCCACACTAATTTGGTG +
Preference number: 5 (lower is better)
Translates to: LAFAMSAPACSSSSVPELEEADR*FHTNLV
Trigger: CACCAAATTAGTGTGGAACAATCTATCAGCCTCCTC...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCGAGGAGGCTGATAGATaGTTCCACACTAATTTGGTG +
Preference number: 5 (lower is better)
Translates to: ECASGGRPCLRHVGASLLEEADR*FHTNLV
Trigger: CACCAAATTAGTGTGGAACAATCTATCAGCCTCCTC...GAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGCAGCAATCATAAAGTaGAGGAGGAGGCTGATAGAT +
Preference number: 5 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAAAIIK*RRRLID
Trigger: ATCTATCAGCCTCCTCCTCAACTTTATGATTGCTGC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCTTCAAAGACAGCTGTaGGGAGCTTCAGAACTTCCT +
Preference number: 5 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRLQRQL*GASELP
Trigger: AGGAAGTTCTGAAGCTCCCAACAGCTGTCTTTGAAG...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCATGGCTCAGCTTCTTaGCAGGAGATTTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAHGSAS*QEISKR
Trigger: CCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATG...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp CTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTAAGTGGTTTCTCTGGTaGCTCAGGAAAAACAGGATG +
Preference number: 5 (lower is better)
Translates to: LAFAMSAPACSSSSVPELKWFLW*LRKNRM
Trigger: CATCCTGTTTTTCCTGAGCAACCAGAGAAACCACTT...AAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ACTCTTGGTGGGAGTGGGCACTCCAGAGGACATGTGGCTAACCATGGTGTCATTGTTTCTCCTCGTACCTaGTGCGAAGGCCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: TLGGSGHSRGHVANHGVIVSPRT*CEGLLH
Trigger: GTGCAGGAGGCCTTCGCACAAGGTACGAGGAGAAAC...AATGACACCATGGTTAGCCACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356599.9
CDS TCA 90 bp TTTCACCTGAATGGAGCTCCTTCACCAGGGATGACATGGTGTTGGTaGTGGAGTCAGCTGCCACCAGCAGGTCATTGCGGAGGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: FHLNGAPSPGMTWCW*WSQLPPAGHCGGFS
Trigger: GGAGAAACCTCCGCAATGACCTGCTGGTGGCAGCTGACTCCATCACCAACACCATGTCATCCCTGGTGAAGGAGCTCCATTCAGGTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479898.5
ENST00000498437.1
CDS TCA 90 bp CGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTGGCCTaGGCCTGGAGATTCAAAGACAGAAAATACGTTATCTCAAGTACC +
Preference number: 5 (lower is better)
Translates to: RPPPWVGDVCGDPVA*AWRFKDRKYVISST
Trigger: GGTACTTGAGATAACGTATTTTCTGTCTTTGAATCTCCAGGCTCAGGCCACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498437.1
CDS GCA 90 bp CTCCTGAGCCTGTTCTGTTCTCTGAGGGCCATTGCTGTCCAGCCTTaGACCAGGGCTCTTTATGGATGCAAACTGGATTTACAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: LLSLFCSLRAIAVQP*TRALYGCKLDLQPP
Trigger: TGGGGGCTGTAAATCCAGTTTGCATCCATAAAGAGCCCTGGTGCAAGGCTGGACAGCAATGGCCCTCAGAGAACAGAACAGGCTCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS CCA 90 bp TTGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTaGCCTGAGCCTGGAGATTCAAAGACAGAAAATACGTTATCTCAA +
Preference number: 5 (lower is better)
Translates to: LAGRLHGWAMYVVTL*PEPGDSKTENTLSQ
Trigger: TTGAGATAACGTATTTTCTGTCTTTGAATCTCCAGGCTCAGGCCACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498437.1
CDS-3UTR CAA 90 bp AGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTAGTGTATTAAGGCCATaGTCTCGGAAGGCTTCAATC +
Preference number: 5 (lower is better)
Translates to: RGMCLWGKTLPSPCRRQLSVLRP*SRKASI
Trigger: GATTGAAGCCTTCCGAGACAATGGCCTTAATACACT...AAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAGCAGTGTATTAAGGCCATaGTCTCGGAAGGCTTCAATC +
Preference number: 5 (lower is better)
Translates to: GVMKVLVHAGLCRGRPTSSVLRP*SRKASI
Trigger: GATTGAAGCCTTCCGAGACAATGGCCTTAATACACT...GCTAGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCATTGTTCCACACTAATTaGGTGAGTAGAAGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPLFHTN*VSRRKA
Trigger: CGCCTTCCTTCTACTCACCAAATTAGTGTGGAACAA...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTTTGTTCCACACTAATTaGGTGAGTAGAAGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTLFHTN*VSRRKA
Trigger: CGCCTTCCTTCTACTCACCAAATTAGTGTGGAACAA...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTGAGGAGGCTGATAGATaGTTCCACACTAATTTGGTG +
Preference number: 5 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTEEADR*FHTNLV
Trigger: CACCAAATTAGTGTGGAACAATCTATCAGCCTCCTC...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCAGCAATCATAAAGTaGAGGAGGAGGCTGATAGAT +
Preference number: 5 (lower is better)
Translates to: MERNVPLGEDLAFAMSAPAAIIK*RRRLID
Trigger: ATCTATCAGCCTCCTCCTCAACTTTATGATTGCTGC...TGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCGCAGCAATCATAAAGTaGAGGAGGAGGCTGATAGAT +
Preference number: 5 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRAAIIK*RRRLID
Trigger: ATCTATCAGCCTCCTCCTCAACTTTATGATTGCTGC...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCAATATCATTAAGCCATaGGAATCTGACATCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SGGRPCLRHVGASLLLVLNIIKP*ESDIWE
Trigger: CTCCCAGATGTCAGATTCCAATGGCTTAATGATATT...GAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGCATGGCTCAGCTTCTTaGCAGGAGATTTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQHGSAS*QEISKR
Trigger: CCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATG...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ATAGCGAGCTATAAGACGGTGTTCCTCATCCAGTCGGCTAGGACTGTCCAGAACGTTTCTCCTCGTACCTaGTGCGAAGGCCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: IASYKTVFLIQSARTVQNVSPRT*CEGLLH
Trigger: GTGCAGGAGGCCTTCGCACAAGGTACGAGGAGAAAC...GTTCTGGACAGTCCTAGCCGACTGGATGAGGAACACCGTCTTATAGCTCGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CAA 90 bp TGGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCCTGAGCTGCCTGCTTTaGCTCTTCCTCCTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: WKDGEECASGGRPCLRHVLSCLL*LFLLQQ
Trigger: TTGCTGAAGGAGGAAGAGCAAAAGCAGGCAGCTCAG...GACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
CDS-3UTR CAA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGTTGTTCCACACTAATTaGGTGAGTAGAAGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: KMERNVPLGEDLAFAMSALFHTN*VSRRKA
Trigger: CGCCTTCCTTCTACTCACCAAATTAGTGTGGAACAA...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGGCAGCAATCATAAAGTaGAGGAGGAGGCTGATAGAT +
Preference number: 5 (lower is better)
Translates to: KMERNVPLGEDLAFAMSAAAIIK*RRRLID
Trigger: ATCTATCAGCCTCCTCCTCAACTTTATGATTGCTGC...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCAATATCATTAAGCCATaGGAATCTGACATCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LPSPCRRQLAPRPLCLSFNIIKP*ESDIWE
Trigger: CTCCCAGATGTCAGATTCCAATGGCTTAATGATATT...GAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGAATATCATTAAGCCATaGGAATCTGACATCTGGGAG +
Preference number: 5 (lower is better)
Translates to: WRGMCLWGKTLPSPCRRQNIIKP*ESDIWE
Trigger: CTCCCAGATGTCAGATTCCAATGGCTTAATGATATT...CTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTAATATCATTAAGCCATaGGAATCTGACATCTGGGAG +
Preference number: 5 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPANIIKP*ESDIWE
Trigger: CTCCCAGATGTCAGATTCCAATGGCTTAATGATATT...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGGAGGGTCAGCCATCATaGTGTCTAAAAACATATTTA +
Preference number: 5 (lower is better)
Translates to: WGKTLPSPCRRQLAPRPLEGQPS*CLKTYL
Trigger: TAAATATGTTTTTAGACACAATGATGGCTGACCCTC...CAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCATGGCTCAGCTTCTTaGCAGGAGATTTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVHGSAS*QEISKR
Trigger: CCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATG...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCTGTCTTTGTTGTTTGTaGGCATCAAAGTTAAAGCTC +
Preference number: 5 (lower is better)
Translates to: CASGGRPCLRHVGASLLLCLCCL*ASKLKL
Trigger: GAGCTTTAACTTTGATGCCAACAAACAACAAAGACA...GAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTGTCTTTGTTGTTTGTaGGCATCAAAGTTAAAGCTC +
Preference number: 5 (lower is better)
Translates to: TLPSPCRRQLAPRPLCLSCLCCL*ASKLKL
Trigger: GAGCTTTAACTTTGATGCCAACAAACAACAAAGACA...GCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TCATTCATATTAGTCAGAGGGCGAGGAGGAACTATATGTGCAAGGTCAAGTGGTCATGTCGGCGCCAGCTaGCTCCTCGTCCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: SFILVRGRGGTICARSSGHVGAS*LLVLCA
Trigger: GGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATG...ACCACTTGACCTTGCACATATAGTTCCTCCTCGCCCTCTGACTAATATGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CAA 90 bp AGAGGGCGAGGAGGAACTATATGTGCAAGGTCAAGTGGTTTCTCTGGTTGCTCATTTCCTCAATCATCCTaGCTCACTTCCCCGCCGGAG +
Preference number: 5 (lower is better)
Translates to: RGRGGTICARSSGFSGCSFPQSS*LTSPPE
Trigger: CTCCGGCGGGGAAGTGAGCAAGGATGATTGAGGAAA...TGAGCAACCAGAGAAACCACTTGACCTTGCACATATAGTTCCTCCTCGCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CAA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGAGGAGGCTGATAGATaGTTCCACACTAATTTGGTG +
Preference number: 5 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQEEADR*FHTNLV
Trigger: CACCAAATTAGTGTGGAACAATCTATCAGCCTCCTC...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GGAAAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGAGGAGGCTGATAGATaGTTCCACACTAATTTGGTG +
Preference number: 5 (lower is better)
Translates to: GKMERNVPLGEDLAFAMSEEADR*FHTNLV
Trigger: CACCAAATTAGTGTGGAACAATCTATCAGCCTCCTC...CGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCAATATCATTAAGCCATaGGAATCTGACATCTGGGAG +
Preference number: 5 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRRNIIKP*ESDIWE
Trigger: CTCCCAGATGTCAGATTCCAATGGCTTAATGATATT...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTAATATCATTAAGCCATaGGAATCTGACATCTGGGAG +
Preference number: 5 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTNIIKP*ESDIWE
Trigger: CTCCCAGATGTCAGATTCCAATGGCTTAATGATATT...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCTTCAAAGACAGCTGTaGGGAGCTTCAGAACTTCCT +
Preference number: 5 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVLQRQL*GASELP
Trigger: AGGAAGTTCTGAAGCTCCCAACAGCTGTCTTTGAAG...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTGAGGGTCAGCCATCATaGTGTCTAAAAACATATTTA +
Preference number: 5 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPAEGQPS*CLKTYL
Trigger: TAAATATGTTTTTAGACACAATGATGGCTGACCCTC...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCGAGGGTCAGCCATCATaGTGTCTAAAAACATATTTA +
Preference number: 5 (lower is better)
Translates to: DGEECASGGRPCLRHVGAEGQPS*CLKTYL
Trigger: TAAATATGTTTTTAGACACAATGATGGCTGACCCTC...GGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGAAGTGGTTTCTCTGGTaGCTCAGGAAAAACAGGATG +
Preference number: 5 (lower is better)
Translates to: RPCPEGSDEGASTCRAVQKWFLW*LRKNRM
Trigger: CATCCTGTTTTTCCTGAGCAACCAGAGAAACCACTT...CTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTTGTCTTTGTTGTTTGTaGGCATCAAAGTTAAAGCTC +
Preference number: 5 (lower is better)
Translates to: EDLAFAMSAPACSSSSVPCLCCL*ASKLKL
Trigger: GAGCTTTAACTTTGATGCCAACAAACAACAAAGACA...AGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGAAGGCAAGGTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCCAGCTTGTCTTTGTTGTTTGTaGGCATCAAAGTTAAAGCTC +
Preference number: 5 (lower is better)
Translates to: ERNVPLGEDLAFAMSAPACLCCL*ASKLKL
Trigger: GAGCTTTAACTTTGATGCCAACAAACAACAAAGACA...AGCTGGCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TCGCCATGTCGGCGCCAGCTTGCTCCTCGTCCTCTGTGCCTGAGCTTCCTCTGTTGTCTTTGTTGTTTGTaGGCATCAAAGTTAAAGCTC +
Preference number: 5 (lower is better)
Translates to: SPCRRQLAPRPLCLSFLCCLCCL*ASKLKL
Trigger: GAGCTTTAACTTTGATGCCAACAAACAACAAAGACA...ACAGAGGAAGCTCAGGCACAGAGGACGAGGAGCAAGCTGGCGCCGACATGGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TGCATGGCTCAGCTTCTTTGCAGGAGATTTCCAAGAGGAATGCTCCTTCATCTGCAGTTCATCCTTCCTTaGCCTCAGCAGCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: CMAQLLCRRFPRGMLLHLQFILP*PQQPQL
Trigger: GAGCTGCGGCTGCTGAGGCAAAGGAAGGATGAACTG...CAGATGAAGGAGCATTCCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS TCA 90 bp CAGAGCCAGCCAGTGGGCCTCAGTTCAGTGGTACAAGATCATACTTaGAAGGAAGGAGTTAGGCTGCTTCCAAGACTGGAGAGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: QSQPVGLSSVVQDHT*KEGVRLLPRLERGR
Trigger: TCTTCCTCTCTCCAGTCTTGGAAGCAGCCTAACTCCTTCCTTTCAAGTATGATCTTGTACCACTGAACTGAGGCCCACTGGCTGGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498437.1
CDS GCA 90 bp CTCTCCTGCAGGGCCGACATCCTCTGCTCCAGTTCATCCTTCCTTTaGCTATCCAAGACGAGAAGCCTATCAGATAAAGAGACCCTCAAA +
Preference number: 5 (lower is better)
Translates to: LSCRADILCSSSSFL*LSKTRSLSDKETLK
Trigger: TTTGAGGGTCTCTTTATCTGATAGGCTTCTCGTCTTGGATAGGCAAAGGAAGGATGAACTGGAGCAGAGGATGTCGGCCCTGCAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489949.5
CDS CCA 90 bp GAGGAGATGACAGTTTCGAGGCGGGACACACTGATCTCGGTGGTATaGTCCAGTGTATTAAGGCCATTGTCTCGGAAGGCTTCAATCATG +
Preference number: 5 (lower is better)
Translates to: EEMTVSRRDTLISVV*SSVLRPLSRKASIM
Trigger: CATGATTGAAGCCTTCCGAGACAATGGCCTTAATACACTGGACCATACCACCGAGATCAGTGTGTCCCGCCTCGAAACTGTCATCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000288642.12
ENST00000303659.8
ENST00000349996.6
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
ENST00000460418.1
ENST00000472690.5
ENST00000485845.5
ENST00000486826.1
ENST00000493538.5
ENST00000495466.6
ENST00000496972.6
CDS-3UTR CAA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTAGTGTATTAAGGCCATaGTCTCGGAAGGCTTCAATC +
Preference number: 5 (lower is better)
Translates to: EMRPCPEGSDEGASTCRASVLRP*SRKASI
Trigger: GATTGAAGCCTTCCGAGACAATGGCCTTAATACACT...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTTTGTTCCACACTAATTaGGTGAGTAGAAGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: EMRPCPEGSDEGASTCRALFHTN*VSRRKA
Trigger: CGCCTTCCTTCTACTCACCAAATTAGTGTGGAACAA...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288642.12
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGCGAGGGTCAGCCATCATaGTGTCTAAAAACATATTTA +
Preference number: 5 (lower is better)
Translates to: RWRGMCLWGKTLPSPCRREGQPS*CLKTYL
Trigger: TAAATATGTTTTTAGACACAATGATGGCTGACCCTC...GCGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGAAGTGGTTTCTCTGGTaGCTCAGGAAAAACAGGATG +
Preference number: 5 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVKWFLW*LRKNRM
Trigger: CATCCTGTTTTTCCTGAGCAACCAGAGAAACCACTT...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp AGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGCAGGGGGAGGCCCACTTGTCTTTGTTGTTTGTaGGCATCAAAGTTAAAGCTC +
Preference number: 5 (lower is better)
Translates to: RGVMKVLVHAGLCRGRPTCLCCL*ASKLKL
Trigger: GAGCTTTAACTTTGATGCCAACAAACAACAAAGACA...AGTGGGCCTCCCCCTGCACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp GTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGGACGAGTCACGTTTCCTGCCATGGCTCAGCTTCTTaGCAGGAGATTTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: VGIKVKAQVSGRTSHVSCHGSAS*QEISKR
Trigger: CCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATG...GCAGGAAACGTGACTCGTCCTCCCACTGACTTGAGCTTTAACTTTGATGCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CAA 90 bp AAGATGGAGAGGAATGTGCCTCTGGGGGAAGACCTTGCCTTCGCCATGTCGGCGTGTCTTTGTTGTTTGTaGGCATCAAAGTTAAAGCTC +
Preference number: 5 (lower is better)
Translates to: KMERNVPLGEDLAFAMSACLCCL*ASKLKL
Trigger: GAGCTTTAACTTTGATGCCAACAAACAACAAAGACA...CGCCGACATGGCGAAGGCAAGGTCTTCCCCCAGAGGCACATTCCTCTCCATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TTGTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGGACGAGTCACGTTTCCTAGGGATGACATGGTGTaGGTGATGGAGTCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LLASKLKLKSVGGRVTFPRDDMV*VMESAA
Trigger: GGCAGCTGACTCCATCACCAACACCATGTCATCCCT...AGGAAACGTGACTCGTCCTCCCACTGACTTGAGCTTTAACTTTGATGCCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS TCA 90 bp CTTGCTTCTCCCGTTACTCGTTTGTTGACTTTTCCCACCCAGGTATaGCAGCAGGGTAGAGTCATACTTTCTACTACTGTAGCCAACCCG +
Preference number: 5 (lower is better)
Translates to: LASPVTRLLTFPTQV*QQGRVILSTTVANP
Trigger: CGGGTTGGCTACAGTAGTAGAAAGTATGACTCTACCCTGCTGTCATACCTGGGTGGGAAAAGTCAACAAACGAGTAACGGGAGAAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS-3UTR CAA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTAATATCATTAAGCCATaGGAATCTGACATCTGGGAG +
Preference number: 5 (lower is better)
Translates to: EMRPCPEGSDEGASTCRANIIKP*ESDIWE
Trigger: CTCCCAGATGTCAGATTCCAATGGCTTAATGATATT...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288642.12
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS GCA 90 bp CAACAGAGGGAGAAAAGGATAGGAAACACGTGCATCTCCAGTATGTaGAGGAACTCTGCTAGTCTAGCTCCTGATATCCTGTCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: QQREKRIGNTCISSM*RNSASLAPDILSAH
Trigger: ATGAGCAGACAGGATATCAGGAGCTAGACTAGCAGAGTTCCTGCACATACTGGAGATGCACGTGTTTCCTATCCTTTTCTCCCTCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460418.1
CDS GCA 90 bp TTCTTGGCAGGACTACTTCAGATCTCTACCCCATCAACGCCTGCATaGGTATTACTTAAGGCACCCCAGCCTCTTCTTAGTATCAGGAAT +
Preference number: 5 (lower is better)
Translates to: FLAGLLQISTPSTPA*VLLKAPQPLLSIRN
Trigger: ATTCCTGATACTAAGAAGAGGCTGGGGTGCCTTAAGTAATACGCATGCAGGCGTTGATGGGGTAGAGATCTGAAGTAGTCCTGCCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495466.6
ENST00000496972.6
CDS CCA 90 bp ACTTTTTCTCCATCAACCAGAGCCAGCCAGTGGGCCTCAGTTCAGTaGTACAAGATCATACTTGAAAGGAAGGAGTTAGGCTGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: TFSPSTRASQWASVQ*YKIILERKELGCFQ
Trigger: TTGGAAGCAGCCTAACTCCTTCCTTTCAAGTATGATCTTGTACCACTGAACTGAGGCCCACTGGCTGGCTCTGGTTGATGGAGAAAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498437.1
CDS-3UTR CAA 90 bp GAGATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGAGGGTCAGCCATCATaGTGTCTAAAAACATATTTA +
Preference number: 5 (lower is better)
Translates to: EMRPCPEGSDEGASTCRAEGQPS*CLKTYL
Trigger: TAAATATGTTTTTAGACACAATGATGGCTGACCCTC...AGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp ATGAGACCATGCCCTGAGGGGAGTGATGAAGGTGCTAGTACATGCAGGGCTGTGTGTCTTTGTTGTTTGTaGGCATCAAAGTTAAAGCTC +
Preference number: 5 (lower is better)
Translates to: MRPCPEGSDEGASTCRAVCLCCL*ASKLKL
Trigger: GAGCTTTAACTTTGATGCCAACAAACAACAAAGACA...CACAGCCCTGCATGTACTAGCACCTTCATCACTCCCCTCAGGGCATGGTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
CDS-3UTR CAA 90 bp TCCAGAACACTCTTGGTGGGAGTGGGCACTCCAGAGGACATGTGGCTAACCATGTGTCTTTGTTGTTTGTaGGCATCAAAGTTAAAGCTC +
Preference number: 5 (lower is better)
Translates to: SRTLLVGVGTPEDMWLTMCLCCL*ASKLKL
Trigger: GAGCTTTAACTTTGATGCCAACAAACAACAAAGACA...CATGGTTAGCCACATGTCCTCTGGAGTGCCCACTCCCACCAAGAGTGTTCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356599.9
CDS-3UTR CAA 90 bp CTAATTGCATGGCTCAGCTTCTTTGCAGGAGATTTCCAAGAGGAATGCTCCTTCAAGTGGTTTCTCTGGTaGCTCAGGAAAAACAGGATG +
Preference number: 5 (lower is better)
Translates to: LIAWLSFFAGDFQEECSFKWFLW*LRKNRM
Trigger: CATCCTGTTTTTCCTGAGCAACCAGAGAAACCACTT...GAAGGAGCATTCCTCTTGGAAATCTCCTGCAAAGAAGCTGAGCCATGCAATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS CCA 90 bp TTAGGTTGTAGAAATTCCTTCATTGGAGTTTGTCTGATGTTTCCTTaGGATGAGATTCAGGTTATGCTTTCTTGGCAGGAGTTACCGGAG +
Preference number: 5 (lower is better)
Translates to: LGCRNSFIGVCLMFP*DEIQVMLSWQELPE
Trigger: CTCCGGTAACTCCTGCCAAGAAAGCATAACCTGAATCTCATCCCAAGGAAACATCAGACAAACTCCAATGAAGGAATTTCTACAACCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473113.1
CDS-3UTR CAA 90 bp TTGTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGGACGAGTCACGTTTCCTTCTTTCTATCTCAATTaGTCCAGCATTTTTCCACCA +
Preference number: 5 (lower is better)
Translates to: LLASKLKLKSVGGRVTFPSFYLN*SSIFPP
Trigger: TGGTGGAAAAATGCTGGACAAATTGAGATAGAAAGA...AGGAAACGTGACTCGTCCTCCCACTGACTTGAGCTTTAACTTTGATGCCAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398951.6
CDS CCA 90 bp CCTTCAAAGACAGCTGTTGGGAGCTTCAGAACTTCCTTCAGAAACTaGTCAAACTTGCTAAATATCATTAAGCCATTGGAATCTGACATC +
Preference number: 5 (lower is better)
Translates to: PSKTAVGSFRTSFRN*SNLLNIIKPLESDI
Trigger: GATGTCAGATTCCAATGGCTTAATGATATTTAGCAAGTTTGACCAGTTTCTGAAGGAAGTTCTGAAGCTCCCAACAGCTGTCTTTGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000288642.12
ENST00000303659.8
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
ENST00000472690.5
ENST00000473113.1
ENST00000474987.5
ENST00000485845.5
ENST00000493386.5
ENST00000495466.6
ENST00000496972.6
CDS-3UTR CAA 90 bp TTGTTTGTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGGACGAGTCACGTTGAGGGTCAGCCATCATaGTGTCTAAAAACATATTTA +
Preference number: 5 (lower is better)
Translates to: LFVGIKVKAQVSGRTSHVEGQPS*CLKTYL
Trigger: TAAATATGTTTTTAGACACAATGATGGCTGACCCTC...AACGTGACTCGTCCTCCCACTGACTTGAGCTTTAACTTTGATGCCAACAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS-3UTR CAA 90 bp TCTTTGTTGTTTGTTGGCATCAAAGTTAAAGCTCAAGTCAGTGGGAGGACGAGTGAGGGTCAGCCATCATaGTGTCTAAAAACATATTTA +
Preference number: 5 (lower is better)
Translates to: SLLFVGIKVKAQVSGRTSEGQPS*CLKTYL
Trigger: TAAATATGTTTTTAGACACAATGATGGCTGACCCTC...ACTCGTCCTCCCACTGACTTGAGCTTTAACTTTGATGCCAACAAACAACAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356599.9
ENST00000398951.6
CDS GCA 72 bp TTCCCCGCCGGAGCAGGGGTCGTCGGGAAGGTCTCCTaGGGCCTCACTCCTCCGCACGCTCCGGCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: FPAGAGVVGKVS*GLTPPHAPAQP
Trigger: GGGCTGGGCCGGAGCGTGCGGAGGAGTGAGGCCGCAGGAGACCTTCCCGACGACCCCTGCTCCGGCGGGGAA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000288642.12
ENST00000356599.9
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
ENST00000486826.1
CDS CCA 72 bp GCACTGGCATGGGCATTGGCCGGCCGCCTCCATGGGTaGGCGATGTATGTGGTGACCCTGTGGCCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: ALAWALAGRLHG*AMYVVTLWPEL
Trigger: CAGCTCAGGCCACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCAATGCCCATGCCAGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
ENST00000495466.6
CDS TCA 72 bp TGGCCGGCCGCCTCCATGGGTGGGCGATGTATGTGGTaGCCCTGTGGCCTGAGCTGCCTGCTTTTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: WPAASMGGRCMW*PCGLSCLLLLF
Trigger: GAAGAGCAAAAGCAGGCAGCTCAGGCCACAGGGTCACCACATACATCGCCCACCCATGGAGGCGGCCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
ENST00000495466.6
CDS TCA 72 bp AGTGAGGGCGGTCCCCCTCCTGCAGATGGTCTGCTTTaGAAAGCCCTGCGCTTGCTCACCCGAGGCTCGAGC +
Preference number: 6 (lower is better)
Translates to: SEGGPPPADGLL*KALRLLTRGSS
Trigger: GCTCGAGCCTCGGGTGAGCAAGCGCAGGGCTTTTCAAAGCAGACCATCTGCAGGAGGGGGACCGCCCTCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS GCA 72 bp GTCCCCCTCCTGCAGATGGTCTGCTTTGAAAAGCCCTaGGCTTGCTCACCCGAGGCTCGAGCACTGCCTGGC +
Preference number: 6 (lower is better)
Translates to: VPLLQMVCFEKP*ACSPEARALPG
Trigger: GCCAGGCAGTGCTCGAGCCTCGGGTGAGCAAGCGCAGGGCTTTTCAAAGCAGACCATCTGCAGGAGGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS TCA 72 bp GCTCTGAAAGTTCCCCAAGGGAACATGACTGCGCCTTaGGTGAGGGCGGTCCCCCTCCTGCAGATGGTCTGC +
Preference number: 6 (lower is better)
Translates to: ALKVPQGNMTAP*VRAVPLLQMVC
Trigger: GCAGACCATCTGCAGGAGGGGGACCGCCCTCACTCAAGGCGCAGTCATGTTCCCTTGGGGAACTTTCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS TCA 72 bp CCACACCGGGATGGCAGGGTATGGGAGGGGAGACTGTaGAGGACACAGGAGCATAACATGAGGCTGTGGAGG +
Preference number: 6 (lower is better)
Translates to: PHRDGRVWEGRL*RTQEHNMRLWR
Trigger: CCTCCACAGCCTCATGTTATGCTCCTGTGTCCTTCACAGTCTCCCCTCCCATACCCTGCCATCCCGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS CCA 72 bp TCTTCCTCCTTCAGCAACTTCATCAGCTCTTCCAGCTaGACCATCAGCTCCCGCCTGCTCTCCTGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: SSSFSNFISSSS*TISSRLLSCRA
Trigger: GGCCCTGCAGGAGAGCAGGCGGGAGCTGATGGTCCAGCTGGAAGAGCTGATGAAGTTGCTGAAGGAGGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404103.7
ENST00000406818.7
ENST00000407038.7
ENST00000407661.7
ENST00000485845.5
ENST00000495466.6
CDS CAA 72 bp AGCTCTGAAAGTTCCCCAAGGGAACATGACTGCGCCTaGAGTGAGGGCGGTCCCCCTCCTGCAGATGGTCTG +
Preference number: 6 (lower is better)
Translates to: SSESSPREHDCA*SEGGPPPADGL
Trigger: CAGACCATCTGCAGGAGGGGGACCGCCCTCACTCAAGGCGCAGTCATGTTCCCTTGGGGAACTTTCAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS CCA 72 bp GGCCATTGCTGTCCAGCCTTGCACCAGGGCTCTTTATaGATGCAAACTGGATTTACAGCCCCCACACCGGGA +
Preference number: 6 (lower is better)
Translates to: GHCCPALHQGSL*MQTGFTAPTPG
Trigger: TCCCGGTGTGGGGGCTGTAAATCCAGTTTGCATCCATAAAGAGCCCTGGTGCAAGGCTGGACAGCAATGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS CAA 90 bp CCTCCTGAGCCTGTTCTGTTCTCTGAGGGCCATTGCTGTCCAGCCTaGCACCAGGGCTCTTTATGGATGCAAACTGGATTTACAGCCCCC +
Preference number: 6 (lower is better)
Translates to: PPEPVLFSEGHCCPA*HQGSLWMQTGFTAP
Trigger: GGGGGCTGTAAATCCAGTTTGCATCCATAAAGAGCCCTGGTGCAAGGCTGGACAGCAATGGCCCTCAGAGAACAGAACAGGCTCAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS CCA 72 bp TCCAGCCTTGCACCAGGGCTCTTTATGGATGCAAACTaGATTTACAGCCCCCACACCGGGATGGCAGGGTAT +
Preference number: 6 (lower is better)
Translates to: SSLAPGLFMDAN*IYSPHTGMAGY
Trigger: ATACCCTGCCATCCCGGTGTGGGGGCTGTAAATCCAGTTTGCATCCATAAAGAGCCCTGGTGCAAGGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS CCA 72 bp CGCCTCCATGGGTGGGCGATGTATGTGGTGACCCTGTaGCCTGAGCCTGGAGATTCAAAGACAGAAAATACG +
Preference number: 6 (lower is better)
Translates to: RLHGWAMYVVTL*PEPGDSKTENT
Trigger: CGTATTTTCTGTCTTTGAATCTCCAGGCTCAGGCCACAGGGTCACCACATACATCGCCCACCCATGGAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498437.1
CDS TCA 72 bp CCAGGGGCTTCCTTGCTTCTCCCGTTACTCGTTTGTTaGCTTTTCCCACCCAGGTATGACAGCAGGGTAGAG +
Preference number: 6 (lower is better)
Translates to: PGASLLLPLLVC*LFPPRYDSRVE
Trigger: CTCTACCCTGCTGTCATACCTGGGTGGGAAAAGTCAACAAACGAGTAACGGGAGAAGCAAGGAAGCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS CCA 72 bp ACAGTTTCGAGGCGGGACACACTGATCTCGGTGGTATaGTCCAGTGTATTAAGGCCATTGTCTCGGAAGGCT +
Preference number: 6 (lower is better)
Translates to: TVSRRDTLISVV*SSVLRPLSRKA
Trigger: AGCCTTCCGAGACAATGGCCTTAATACACTGGACCATACCACCGAGATCAGTGTGTCCCGCCTCGAAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000288642.12
ENST00000303659.8
ENST00000349996.6
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
ENST00000460418.1
ENST00000472690.5
ENST00000485845.5
ENST00000486826.1
ENST00000493538.5
ENST00000495466.6
ENST00000496972.6
CDS CCA 72 bp AGGAGGCTATCAGCGCATGCTCATCGGCCAAGTGACTaGGTATATCCTGGCTATACTGTAACCTGGTCAGGT +
Preference number: 6 (lower is better)
Translates to: RRLSAHAHRPSD*VYPGYTVTWSG
Trigger: ACCTGACCAGGTTACAGTATAGCCAGGATATACCCAGTCACTTGGCCGATGAGCATGCGCTGATAGCCTCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479898.5
CDS GCA 72 bp GAGTACTTCTCAATGCGTCCTGCTGTGGAAAACAGGTaGGGACTGAGTGCTCTGTGTAACCAAAAGATGGCC +
Preference number: 6 (lower is better)
Translates to: EYFSMRPAVENR*GLSALCNQKMA
Trigger: GGCCATCTTTTGGTTACACAGAGCACTCAGTCCGCACCTGTTTTCCACAGCAGGACGCATTGAGAAGTACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473113.1
CDS CAA 72 bp CCTGTTCTGTTCTCTGAGGGCCATTGCTGTCCAGCCTaGCACCAGGGCTCTTTATGGATGCAAACTGGATTT +
Preference number: 6 (lower is better)
Translates to: PVLFSEGHCCPA*HQGSLWMQTGF
Trigger: AAATCCAGTTTGCATCCATAAAGAGCCCTGGTGCAAGGCTGGACAGCAATGGCCCTCAGAGAACAGAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS TCA 72 bp CCAGTGGGCCTCAGTTCAGTGGTACAAGATCATACTTaGAAGGAAGGAGTTAGGCTGCTTCCAAGACTGGAG +
Preference number: 6 (lower is better)
Translates to: PVGLSSVVQDHT*KEGVRLLPRLE
Trigger: CTCCAGTCTTGGAAGCAGCCTAACTCCTTCCTTTCAAGTATGATCTTGTACCACTGAACTGAGGCCCACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498437.1
CDS GCA 72 bp CTGTTCTGTTCTCTGAGGGCCATTGCTGTCCAGCCTTaGACCAGGGCTCTTTATGGATGCAAACTGGATTTA +
Preference number: 6 (lower is better)
Translates to: LFCSLRAIAVQP*TRALYGCKLDL
Trigger: TAAATCCAGTTTGCATCCATAAAGAGCCCTGGTGCAAGGCTGGACAGCAATGGCCCTCAGAGAACAGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS GCA 72 bp GGACTACTTCAGATCTCTACCCCATCAACGCCTGCATaGGTATTACTTAAGGCACCCCAGCCTCTTCTTAGT +
Preference number: 6 (lower is better)
Translates to: GLLQISTPSTPA*VLLKAPQPLLS
Trigger: ACTAAGAAGAGGCTGGGGTGCCTTAAGTAATACGCATGCAGGCGTTGATGGGGTAGAGATCTGAAGTAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495466.6
ENST00000496972.6
CDS CAA 72 bp AGGGCGAGGAGGACTACTTGCAATAGAATCCAAGTCTaGCTGCAAATCCATAGCCTAATGAACCCGGTCAGC +
Preference number: 6 (lower is better)
Translates to: RARRTTCNRIQV*LQIHSLMNPVS
Trigger: GCTGACCGGGTTCATTAGGCTATGGATTTGCAGCAAGACTTGGATTCTATTGCAAGTAGTCCTCCTCGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489756.1
CDS CAA 72 bp TCAGAGGGCGAGGAGGATTGCAATAGAATCCAAGTCTaGCTGCAAATCCATAGCCTAATGAACCCGGTCAGC +
Preference number: 6 (lower is better)
Translates to: SEGEEDCNRIQV*LQIHSLMNPVS
Trigger: GCTGACCGGGTTCATTAGGCTATGGATTTGCAGCAAGACTTGGATTCTATTGCAATCCTCCTCGCCCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486555.5
CDS CAA 90 bp GATTCAGGTTATGCTTTCTTGGCAGGAGTTACCGGAGAAGTGATATaGAGTACTTCTCAATGCGTCCTGCTGTGGAAAACAGGTGCGGAC +
Preference number: 6 (lower is better)
Translates to: DSGYAFLAGVTGEVI*STSQCVLLWKTGAD
Trigger: GTCCGCACCTGTTTTCCACAGCAGGACGCATTGAGAAGTACTCAATATCACTTCTCCGGTAACTCCTGCCAAGAAAGCATAACCTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473113.1
CDS GCA 72 bp GAGAAAAGGATAGGAAACACGTGCATCTCCAGTATGTaGAGGAACTCTGCTAGTCTAGCTCCTGATATCCTG +
Preference number: 6 (lower is better)
Translates to: EKRIGNTCISSM*RNSASLAPDIL
Trigger: CAGGATATCAGGAGCTAGACTAGCAGAGTTCCTGCACATACTGGAGATGCACGTGTTTCCTATCCTTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460418.1
CDS CCA 72 bp ATACTTTCTACTACTGTAGCCAACCCGAGGCAGCCATaGAGACAGATGCTTCTCAGGAGAAGGAAAGTCATT +
Preference number: 6 (lower is better)
Translates to: ILSTTVANPRQP*RQMLLRRRKVI
Trigger: AATGACTTTCCTTCTCCTGAGAAGCATCTGTCTCCATGGCTGCCTCGGGTTGGCTACAGTAGTAGAAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS CAA 90 bp ATTAGTCAGAGGGCGAGGAGGACTACTTGCAATAGAATCCAAGTCTaGCTGCAAATCCATAGCCTAATGAACCCGGTCAGCAATTCCATT +
Preference number: 6 (lower is better)
Translates to: ISQRARRTTCNRIQV*LQIHSLMNPVSNSI
Trigger: AATGGAATTGCTGACCGGGTTCATTAGGCTATGGATTTGCAGCAAGACTTGGATTCTATTGCAAGTAGTCCTCCTCGCCCTCTGACTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489756.1
CDS TCA 72 bp CCCGTTACTCGTTTGTTGACTTTTCCCACCCAGGTATaGCAGCAGGGTAGAGTCATACTTTCTACTACTGTA +
Preference number: 6 (lower is better)
Translates to: PVTRLLTFPTQV*QQGRVILSTTV
Trigger: TACAGTAGTAGAAAGTATGACTCTACCCTGCTGTCATACCTGGGTGGGAAAAGTCAACAAACGAGTAACGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488457.1
CDS CCA 72 bp GAAAGTACTTTTTCTCCATCAACCAGAGCCAGCCAGTaGGCCTCAGTTCAGTGGTACAAGATCATACTTGAA +
Preference number: 6 (lower is better)
Translates to: ESTFSPSTRASQ*ASVQWYKIILE
Trigger: TTCAAGTATGATCTTGTACCACTGAACTGAGGCCCACTGGCTGGCTCTGGTTGATGGAGAAAAAGTACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498437.1
CDS CAA 72 bp CTGATCTCGGTGGTATGGTCCAGTGTATTAAGGCCATaGTCTCGGAAGGCTTCAATCATGTTCCAGATATCA +
Preference number: 6 (lower is better)
Translates to: LISVVWSSVLRP*SRKASIMFQIS
Trigger: TGATATCTGGAACATGATTGAAGCCTTCCGAGACAATGGCCTTAATACACTGGACCATACCACCGAGATCAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000288642.12
ENST00000303659.8
ENST00000349996.6
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
ENST00000460418.1
ENST00000472690.5
ENST00000485845.5
ENST00000486826.1
ENST00000493538.5
ENST00000495466.6
ENST00000496972.6
CDS CAA 72 bp CTTCAGGGTAGTCCTACACTTTACTCGTTAGCTTCCTaGTCAGGCTATTGCCCAAACTTGCTTGATGATAAG +
Preference number: 6 (lower is better)
Translates to: LQGSPTLYSLAS*SGYCPNLLDDK
Trigger: CTTATCATCAAGCAAGTTTGGGCAATAGCCTGACAAGGAAGCTAACGAGTAAAGTGTAGGACTACCCTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482145.5
CDS CAA 72 bp GTTGCTAACATAGCTTTAACTGAAAATACCGTCAACTaGCCTCGGCCCTCACTGTCATATGCAGCAATCATA +
Preference number: 6 (lower is better)
Translates to: VANIALTENTVN*PRPSLSYAAII
Trigger: TATGATTGCTGCATATGACAGTGAGGGCCGAGGCAAGTTGACGGTATTTTCAGTTAAAGCTATGTTAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000288642.12
ENST00000303659.8
ENST00000398951.6
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
ENST00000485845.5
ENST00000495466.6
ENST00000496972.6
CDS CAA 90 bp ACAGCTGTTGGGAGCTTCAGAACTTCCTTCAGAAACTGGTCAAACTaGCTAAATATCATTAAGCCATTGGAATCTGACATCTGGGAGAAA +
Preference number: 6 (lower is better)
Translates to: TAVGSFRTSFRNWSN*LNIIKPLESDIWEK
Trigger: TTTCTCCCAGATGTCAGATTCCAATGGCTTAATGATATTTAGCAAGTTTGACCAGTTTCTGAAGGAAGTTCTGAAGCTCCCAACAGCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000288642.12
ENST00000303659.8
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
ENST00000472690.5
ENST00000473113.1
ENST00000474987.5
ENST00000485845.5
ENST00000493386.5
ENST00000495466.6
ENST00000496972.6
CDS TCA 72 bp GACATCAAAATTCTGAGCACCAAACGTCTCCCAGACTaGCTGTTATCCTTAAGTCAGAGGATGATAATTCAT +
Preference number: 6 (lower is better)
Translates to: DIKILSTKRLPD*LLSLSQRMIIH
Trigger: ATGAATTATCATCCTCTGACTTAAGGATAACAGTCAGTCTGGGAGACGTTTGGTGCTCAGAATTTTGATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495466.6
ENST00000496972.6
CDS CCA 72 bp TTGCTAAATATCATTAAGCCATTGGAATCTGACATCTaGGAGAAAACATCGGTGATAAGCAGGAAACAGGGT +
Preference number: 6 (lower is better)
Translates to: LLNIIKPLESDI*EKTSVISRKQG
Trigger: ACCCTGTTTCCTGCTTATCACCGATGTTTTCTCCCAGATGTCAGATTCCAATGGCTTAATGATATTTAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474987.5
CDS CCA 72 bp TGTCCCAATAACGTCCGTTATAGCAACAGAAAATCCTaGCTTGTGAGTTCATTCAGCTTTTCATGTCTCTTT +
Preference number: 6 (lower is better)
Translates to: CPNNVRYSNRKS*LVSSFSFSCLF
Trigger: AAAGAGACATGAAAAGCTGAATGAACTCACAAGCCAGGATTTTCTGTTGCTATAACGGACGTTATTGGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473113.1
CDS CAA 72 bp GGGAGCTTCAGAACTTCCTTCAGAAACTGGTCAAACTaGCTAAATATCATTAAGCCATTGGAATCTGACATC +
Preference number: 6 (lower is better)
Translates to: GSFRTSFRNWSN*LNIIKPLESDI
Trigger: GATGTCAGATTCCAATGGCTTAATGATATTTAGCAAGTTTGACCAGTTTCTGAAGGAAGTTCTGAAGCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000288642.12
ENST00000303659.8
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
ENST00000472690.5
ENST00000473113.1
ENST00000474987.5
ENST00000485845.5
ENST00000493386.5
ENST00000495466.6
ENST00000496972.6
CDS CAA 90 bp ACTTCCTTCAGAAACTGGTCAAACTTGCTAAATATCATTAAGCCATaGGAATCTGACATCTGGGAGAAAACATCGGTGATAAGCAGGAAA +
Preference number: 6 (lower is better)
Translates to: TSFRNWSNLLNIIKP*ESDIWEKTSVISRK
Trigger: TTTCCTGCTTATCACCGATGTTTTCTCCCAGATGTCAGATTCCAATGGCTTAATGATATTTAGCAAGTTTGACCAGTTTCTGAAGGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474987.5
CDS CAA 90 bp ACTTCCTTCAGAAACTGGTCAAACTTGCTAAATATCATTAAGCCATaGGAATCTGACATCTGGGAGAAAACATATCTCAATTTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: TSFRNWSNLLNIIKP*ESDIWEKTYLNLSS
Trigger: GCTGGACAAATTGAGATATGTTTTCTCCCAGATGTCAGATTCCAATGGCTTAATGATATTTAGCAAGTTTGACCAGTTTCTGAAGGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000288642.12
ENST00000303659.8
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
ENST00000473113.1
ENST00000485845.5
ENST00000495466.6
ENST00000496972.6
CDS CAA 90 bp ACTTCCTTCAGAAACTGGTCAAACTTGCTAAATATCATTAAGCCATaGGAATCTGACATCTGGGAGAAAACATCTGTCATATGCAGCAAT +
Preference number: 6 (lower is better)
Translates to: TSFRNWSNLLNIIKP*ESDIWEKTSVICSN
Trigger: ATTGCTGCATATGACAGATGTTTTCTCCCAGATGTCAGATTCCAATGGCTTAATGATATTTAGCAAGTTTGACCAGTTTCTGAAGGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472690.5
CDS TCA 72 bp ATAACGTCCGTTATAGCAACAGAAAATCCTGGCTTGTaGGTTCATTCAGCTTTTCATGTCTCTTTAAACTCT +
Preference number: 6 (lower is better)
Translates to: ITSVIATENPGL*VHSAFHVSLNS
Trigger: AGAGTTTAAAGAGACATGAAAAGCTGAATGAACTCACAAGCCAGGATTTTCTGTTGCTATAACGGACGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473113.1
CDS CAA 72 bp AGAAACTGGTCAAACTTGCTAAATATCATTAAGCCATaGGAATCTGACATCTGGGAGAAAACATCGGTGATA +
Preference number: 6 (lower is better)
Translates to: RNWSNLLNIIKP*ESDIWEKTSVI
Trigger: TATCACCGATGTTTTCTCCCAGATGTCAGATTCCAATGGCTTAATGATATTTAGCAAGTTTGACCAGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474987.5
CDS CAA 72 bp CATCCAATACCTCATAAAATGGTGATAATGTCTGTTTaGCCTACTTCCTGGACTGTTCTGAGAATAATAGGT +
Preference number: 6 (lower is better)
Translates to: HPIPHKMVIMSV*PTSWTVLRIIG
Trigger: ACCTATTATTCTCAGAACAGTCCAGGAAGTAGGCAAAACAGACATTATCACCATTTTATGAGGTATTGGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489949.5
CDS CAA 90 bp ACTTCCTTCAGAAACTGGTCAAACTTGCTAAATATCATTAAGCCATaGGAATCTGACATCTGGGAGAAAACATCTATGAGAACAAAACCA +
Preference number: 6 (lower is better)
Translates to: TSFRNWSNLLNIIKP*ESDIWEKTSMRTKP
Trigger: TGGTTTTGTTCTCATAGATGTTTTCTCCCAGATGTCAGATTCCAATGGCTTAATGATATTTAGCAAGTTTGACCAGTTTCTGAAGGAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493386.5
CDS CAA 72 bp AGAAACTGGTCAAACTTGCTAAATATCATTAAGCCATaGGAATCTGACATCTGGGAGAAAACATCTGTCATA +
Preference number: 6 (lower is better)
Translates to: RNWSNLLNIIKP*ESDIWEKTSVI
Trigger: TATGACAGATGTTTTCTCCCAGATGTCAGATTCCAATGGCTTAATGATATTTAGCAAGTTTGACCAGTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472690.5
CDS CAA 72 bp AGAAACTGGTCAAACTTGCTAAATATCATTAAGCCATaGGAATCTGACATCTGGGAGAAAACATCTATGAGA +
Preference number: 6 (lower is better)
Translates to: RNWSNLLNIIKP*ESDIWEKTSMR
Trigger: TCTCATAGATGTTTTCTCCCAGATGTCAGATTCCAATGGCTTAATGATATTTAGCAAGTTTGACCAGTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493386.5
CDS CCA 72 bp TTGCTAAATATCATTAAGCCATTGGAATCTGACATCTaGGAGAAAACATCTGTCATATGCAGCAATCATAAA +
Preference number: 6 (lower is better)
Translates to: LLNIIKPLESDI*EKTSVICSNHK
Trigger: TTTATGATTGCTGCATATGACAGATGTTTTCTCCCAGATGTCAGATTCCAATGGCTTAATGATATTTAGCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472690.5
CDS CAA 72 bp AGAAACTGGTCAAACTTGCTAAATATCATTAAGCCATaGGAATCTGACATCTGGGAGAAAACATATCTCAAT +
Preference number: 6 (lower is better)
Translates to: RNWSNLLNIIKP*ESDIWEKTYLN
Trigger: ATTGAGATATGTTTTCTCCCAGATGTCAGATTCCAATGGCTTAATGATATTTAGCAAGTTTGACCAGTTTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000288642.12
ENST00000303659.8
ENST00000404103.7
ENST00000405222.5
ENST00000406818.7
ENST00000407038.7
ENST00000407186.5
ENST00000407661.7
ENST00000473113.1
ENST00000485845.5
ENST00000495466.6
ENST00000496972.6