RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DTNA (Homo sapiens)

Ensembl gene IDs: ENSG00000134769

Ensembl transcript IDs: ENST00000269192.11, ENST00000283365.13, ENST00000283365.14, ENST00000315456.10, ENST00000348997.9, ENST00000399113.7, ENST00000399121.9, ENST00000444659.5, ENST00000444659.6, ENST00000554864.7, ENST00000556414.7, ENST00000585446.1, ENST00000587723.1, ENST00000588125.5, ENST00000588506.1, ENST00000588684.5, ENST00000588771.1, ENST00000588949.6, ENST00000590727.1, ENST00000591182.5, ENST00000591816.6, ENST00000592449.1, ENST00000595022.5, ENST00000596745.5, ENST00000597599.5, ENST00000597674.5, ENST00000598142.5, ENST00000598334.5, ENST00000598774.6, ENST00000599844.5, ENST00000601125.5, ENST00000601632.6, ENST00000679372.1, ENST00000679678.1, ENST00000679731.1, ENST00000679796.1, ENST00000679936.1, ENST00000680346.1, ENST00000680366.1, ENST00000680767.1, ENST00000680767.2, ENST00000680822.1, ENST00000681065.1, ENST00000681241.1, ENST00000681274.1, ENST00000681470.1, ENST00000681759.1, ENST00000682129.1, ENST00000682406.1, ENST00000682483.1, ENST00000682581.1, ENST00000682923.1, ENST00000683092.1, ENST00000683370.1, ENST00000683379.1, ENST00000683705.1, ENST00000683876.1, ENST00000684228.1, ENST00000684266.1, ENST00000684359.1, ENST00000684377.1, ENST00000684560.1, ENST00000684610.1, ENST00000684734.1

Found 2521 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAAATGCCTCTTGTACATCTCCCCCTACTCCTGTGAGGGAGTCCTaGGGCGTGTGCGTCGGGGTGGAGCAGGCTGACGCTGACCGGATG +
Preference number: 1 (lower is better)
Translates to: ANASCTSPPTPVRES*GVCVGVEQADADRM
Trigger: CATCCGGTCAGCGTCAGCCTGCTCCACCCCGACGCACACGCCGCAGGACTCCCTCACAGGAGTAGGGGGAGATGTACAAGAGGCATTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR TCA 90 bp GGCAAACTCTGCCACTACCCAGACGATGTATTGCTGACATCTGGGTaGCGTGGGCCCTGGTCCTTGGGTACCGACACCGCAGTACCCGCT +
Preference number: 1 (lower is better)
Translates to: GKLCHYPDDVLLTSG*RGPWSLGTDTAVPA
Trigger: AGCGGGTACTGCGGTGTCGGTACCCAAGGACCAGGGCCCACGTCACCCAGATGTCAGCAATACATCGTCTGGGTAGTGGCAGAGTTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR GCA 90 bp GAGGAGCTGGAAGGTGAGGGGGCAGTGGCGCCACCTTGGGGGCACTaGCACAGTTTGGCTCTGTGCATCCATCTGTTTACGAACTTCCTG +
Preference number: 1 (lower is better)
Translates to: EELEGEGAVAPPWGH*HSLALCIHLFTNFL
Trigger: CAGGAAGTTCGTAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTGGCGCCACTGCCCCCTCACCTTCCAGCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR CCA 90 bp ACTCTGCCACTACCCAGACGATGTATTGCTGACATCTGGGTGACGTaGGCCCTGGTCCTTGGGTACCGACACCGCAGTACCCGCTGTTGG +
Preference number: 1 (lower is better)
Translates to: TLPLPRRCIADIWVT*ALVLGYRHRSTRCW
Trigger: CCAACAGCGGGTACTGCGGTGTCGGTACCCAAGGACCAGGGCCCACGTCACCCAGATGTCAGCAATACATCGTCTGGGTAGTGGCAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR CCA 90 bp ACAGCCGCCCTCTGCAGAGGGGGCATGAAGATGTCAGGACTTGGCTaGGCACCTACCAACTACGAACTTGGTGTGTGGGTTCAGAGAAGG +
Preference number: 1 (lower is better)
Translates to: TAALCRGGMKMSGLG*APTNYELGVWVQRR
Trigger: CCTTCTCTGAACCCACACACCAAGTTCGTAGTTGGTAGGTGCCCAGCCAAGTCCTGACATCTTCATGCCCCCTCTGCAGAGGGCGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CCA 90 bp TCGTACAGCCGCCCTCTGCAGAGGGGGCATGAAGATGTCAGGACTTaGCTGGGCACCTACCAACTACGAACTTGGTGTGTGGGTTCAGAG +
Preference number: 1 (lower is better)
Translates to: SYSRPLQRGHEDVRT*LGTYQLRTWCVGSE
Trigger: CTCTGAACCCACACACCAAGTTCGTAGTTGGTAGGTGCCCAGCCAAGTCCTGACATCTTCATGCCCCCTCTGCAGAGGGCGGCTGTACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CCA 90 bp GGGAGGCACGATGTGAGCCAAGTTGAGTGGCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAG +
Preference number: 1 (lower is better)
Translates to: GRHDVSQVEWLLRLI*EHGVQRFTAGSTAQ
Trigger: CTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCACATCGTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
3UTR TCA 90 bp CGCAGACATGTGAACATCGTACAGCCGCCCTCTGCAGAGGGGGCATaGAGATGTCAGGACTTGGCTGGGCACCTACCAACTACGAACTTG +
Preference number: 1 (lower is better)
Translates to: RRHVNIVQPPSAEGA*RCQDLAGHLPTTNL
Trigger: CAAGTTCGTAGTTGGTAGGTGCCCAGCCAAGTCCTGACATCTTCATGCCCCCTCTGCAGAGGGCGGCTGTACGATGTTCACATGTCTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CCA 90 bp AATAGGCAAACTCTGCCACTACCCAGACGATGTATTGCTGACATCTaGGTGACGTGGGCCCTGGTCCTTGGGTACCGACACCGCAGTACC +
Preference number: 1 (lower is better)
Translates to: NRQTLPLPRRCIADI*VTWALVLGYRHRST
Trigger: GGTACTGCGGTGTCGGTACCCAAGGACCAGGGCCCACGTCACCCAGATGTCAGCAATACATCGTCTGGGTAGTGGCAGAGTTTGCCTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR GCA 90 bp GGTTCAAGTCACTGCTCACAGAGACTTGGAGTCAACTACAGACCGTaGAGGCCAAGGACCCTTCTTGGCTTCCGGGCTCTGAGTTTGTAC +
Preference number: 1 (lower is better)
Translates to: GSSHCSQRLGVNYRP*RPRTLLGFRALSLY
Trigger: GTACAAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGCCTGCACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAGTGACTTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CCA 90 bp GTGGCTGAGACGAAGAGGACTCTGCTGCCAGCCTTGCCGCATACCTaGCAATTAGCCTGTGTTCTTCATCAAGCCGGTTTGAACTCTCAA +
Preference number: 1 (lower is better)
Translates to: VAETKRTLLPALPHT*QLACVLHQAGLNSQ
Trigger: TTGAGAGTTCAAACCGGCTTGATGAAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCTCAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR TCA 90 bp TTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTaGCGTGGAGCTAAGAGAGAGAAAAGGTGGCTGGTTAGTCAGAAA +
Preference number: 1 (lower is better)
Translates to: LSRLQDRGARVWSQC*RGAKREKRWLVSQK
Trigger: TTTCTGACTAACCAGCCACCTTTTCTCTCTCTTAGCTCCACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR TCA 90 bp CTAGCTCAGCAATCAGCTGCCTTTGCTGCTTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCACTTCTCTGCTGAGGTGGCTGAGACG +
Preference number: 1 (lower is better)
Translates to: LAQQSAAFAAYSHRW*KRCQEHFSAEVAET
Trigger: CGTCTCAGCCACCTCAGCAGAGAAGTGCTCCTGACATCTCTTTCACCATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR TCA 90 bp TCCGTAACCATGTCGCCACGCATGGTACTTGTGGTAGCTCCACTGTaGATGTACCCAGGTTTTCGGGCATGGATTTGCGCTAGAAAAGCC +
Preference number: 1 (lower is better)
Translates to: SVTMSPRMVLVVAPL*MYPGFRAWICARKA
Trigger: GGCTTTTCTAGCGCAAATCCATGCCCGAAAACCTGGGTACATTCACAGTGGAGCTACCACAAGTACCATGCGTGGCGACATGGTTACGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR CCA 90 bp GAGACTTGGAGTCAACTACAGACCGTGCAGGCCAAGGACCCTTCTTaGCTTCCGGGCTCTGAGTTTGTACACTCAGGAACCAAATTCTTC +
Preference number: 1 (lower is better)
Translates to: ETWSQLQTVQAKDPS*LPGSEFVHSGTKFF
Trigger: GAAGAATTTGGTTCCTGAGTGTACAAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGCCTGCACGGTCTGTAGTTGACTCCAAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CCA 90 bp TGGTCCATAGGAGCCTTTCAAGATCCTGCTGCCTGGGAAATGGCCTaGAAAGTATCCCCAAGGGAAATGGCTAAAGCAAGGCTGATGACG +
Preference number: 1 (lower is better)
Translates to: WSIGAFQDPAAWEMA*KVSPREMAKARLMT
Trigger: CGTCATCAGCCTTGCTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGCAGGATCTTGAAAGGCTCCTATGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR CCA 90 bp ACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTACGAACTTCCTaGTCCATAGGAGCCTTTCAAGATCCTGCTGCCTGGGAAATGGCC +
Preference number: 1 (lower is better)
Translates to: TATVWLCASICLRTS*SIGAFQDPAAWEMA
Trigger: GGCCATTTCCCAGGCAGCAGGATCTTGAAAGGCTCCTATGGACCAGGAAGTTCGTAAACAGATGGATGCACAGAGCCAAACTGTGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR GCA 90 bp GGCCCCAAAGAATGGATTATTCCTGGTGTGTTTGGTTCAAGTCACTaGTCACAGAGACTTGGAGTCAACTACAGACCGTGCAGGCCAAGG +
Preference number: 1 (lower is better)
Translates to: GPKEWIIPGVFGSSH*SQRLGVNYRPCRPR
Trigger: CCTTGGCCTGCACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAACACACCAGGAATAATCCATTCTTTGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR GCA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTaGGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTG +
Preference number: 1 (lower is better)
Translates to: MPFLLRTVEFSLVAP*VESNQGECSNQRLL
Trigger: CAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR TCA 90 bp CAAGCATGCGTGCACCGTGATCAAGCTGATTTACGTACAGCTTTATaGGGGAATGCTCTTCAGCCACAGGGCTGGATGCACTTATTCCCT +
Preference number: 1 (lower is better)
Translates to: QACVHRDQADLRTAL*GNALQPQGWMHLFP
Trigger: AGGGAATAAGTGCATCCAGCCCTGTGGCTGAAGAGCATTCCCTCATAAAGCTGTACGTAAATCAGCTTGATCACGGTGCACGCATGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR CCA 90 bp GCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTaGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTA +
Preference number: 1 (lower is better)
Translates to: AVDFTFLPSSINMAL*RRVGCVRPVLINRL
Trigger: TAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR TCA 90 bp GTATCCCCAAGGGAAATGGCTAAAGCAAGGCTGATGACGACAGGATaGTTGCCCTCTCTCTCTGCTAGGAGGAGGGAGGTTATAATTGAA +
Preference number: 1 (lower is better)
Translates to: VSPREMAKARLMTTG*LPSLSARRREVIIE
Trigger: TTCAATTATAACCTCCCTCCTCCTAGCAGAGAGAGAGGGCAATCATCCTGTCGTCATCAGCCTTGCTTTAGCCATTTCCCTTGGGGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR GCA 90 bp CACAAAGAAACAACATATGCCAGCTCGGTCCAGTCAGTGGTGGAGTaGCACGTGCAGGATTTAAGTTCTGAGTTCAAGAACTACCTGGCT +
Preference number: 1 (lower is better)
Translates to: HKETTYASSVQSVVE*HVQDLSSEFKNYLA
Trigger: AGCCAGGTAGTTCTTGAACTCAGAACTTAAATCCTGCACGTGGCACTCCACCACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR TCA 90 bp CTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCAGGATTTAAGTTCTaGGTTCAAGAACTACCTGGCTATGATTTTGAGCTGACAGCATTA +
Preference number: 1 (lower is better)
Translates to: LGPVSGGVPRAGFKF*VQELPGYDFELTAL
Trigger: TAATGCTGTCAGCTCAAAATCATAGCCAGGTAGTTCTTGAACTCAGAACTTAAATCCTGCACGTGGCACTCCACCACTGACTGGACCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR GCA 90 bp TTGCCTCGGTGGCTCAATATTCCATCAATGGGTCCTGCTTTAAACTaGAAGTACCTGCCTTCCTTCTTTCAACAGACTGACTCCACGTTG +
Preference number: 1 (lower is better)
Translates to: LPRWLNIPSMGPALN*KYLPSFFQQTDSTL
Trigger: CAACGTGGAGTCAGTCTGTTGAAAGAAGGAAGGCAGGTACTTGCAGTTTAAAGCAGGACCCATTGATGGAATATTGAGCCACCGAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000680767.1
3UTR GCA 90 bp CACCAGGTGCAAATTGCATTTCTTCTGAACAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAGTCGGATGCGATCCAGATCTTGAGC +
Preference number: 1 (lower is better)
Translates to: HQVQIAFLLNKPKLA*CSVGGESDAIQILS
Trigger: GCTCAAGATCTGGATCGCATCCGACTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
3UTR CCA 90 bp CGAGTTGGAAAGAGGCCCCAAAGAATGGATTATTCCTGGTGTGTTTaGTTCAAGTCACTGCTCACAGAGACTTGGAGTCAACTACAGACC +
Preference number: 1 (lower is better)
Translates to: RVGKRPQRMDYSWCV*FKSLLTETWSQLQT
Trigger: GGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAACACACCAGGAATAATCCATTCTTTGGGGCCTCTTTCCAACTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR TCA 90 bp ATCATTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTaGCCAACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAAC +
Preference number: 1 (lower is better)
Translates to: IIQEPIFHNLQHNSL*PTKLTPTSVLTNHN
Trigger: GTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR CCA 90 bp TCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTaGTGTCAGCCTGTGCTCAGAGACATTTGTCAGGTGAGTTCTCTG +
Preference number: 1 (lower is better)
Translates to: SICAKKSENCAVVPL*CQPVLRDICQVSSL
Trigger: CAGAGAACTCACCTGACAAATGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CCA 90 bp AAACAACCTCGAGTTGGAAAGAGGCCCCAAAGAATGGATTATTCCTaGTGTGTTTGGTTCAAGTCACTGCTCACAGAGACTTGGAGTCAA +
Preference number: 1 (lower is better)
Translates to: KQPRVGKRPQRMDYS*CVWFKSLLTETWSQ
Trigger: TTGACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAACACACCAGGAATAATCCATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR GCA 90 bp ATCTTAGACGAACATTTTGATGTAGAAACACAAAGAAACAACATATaGCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCAGGATTT +
Preference number: 1 (lower is better)
Translates to: ILDEHFDVETQRNNI*QLGPVSGGVPRAGF
Trigger: AAATCCTGCACGTGGCACTCCACCACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTGTGTTTCTACATCAAAATGTTCGTCTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR GCA 90 bp GAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATaGTTCTATGACATTCCATATGTCCACCAGGTGCAAATTGCATTT +
Preference number: 1 (lower is better)
Translates to: EFSVWVQVVQSIFPQ*FYDIPYVHQVQIAF
Trigger: AAATGCAATTTGCACCTGGTGGACATATGGAATGTCATAGAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACTGAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
3UTR GCA 90 bp ATTTCTCTGTTCTTGTTTTCTAGCTCAGCAATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTGAAAGAGATGTCAGGAGCACTTCTC +
Preference number: 1 (lower is better)
Translates to: ISLFLFSSSAISCLC*LFASMVKEMSGALL
Trigger: GAGAAGTGCTCCTGACATCTCTTTCACCATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCTAGAAAACAAGAACAGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR CCA 90 bp CAGAATTCCCAAAGGAGGTCTTTAGGGCCCTCTAAAGAGGGTCCTTaGAAAAGACTATCCCAGTCTTTTATCCTCTTGTCTTTGATAGCT +
Preference number: 1 (lower is better)
Translates to: QNSQRRSLGPSKEGP*KRLSQSFILLSLIA
Trigger: AGCTATCAAAGACAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCCTAAAGACCTCCTTTGGGAATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR TCA 90 bp GGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTaGTGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAAACA +
Preference number: 1 (lower is better)
Translates to: GLAVLDQCLLTGYQL*WRWMCNSLWNKKET
Trigger: TGTTTCTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR TCA 90 bp TGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCTTCTATaGCATTCCATATGTCCACCAGGTGCAAATTGCATTTCTTCTGAA +
Preference number: 1 (lower is better)
Translates to: CLGPGCSEHFPAMLL*HSICPPGANCISSE
Trigger: TTCAGAAGAAATGCAATTTGCACCTGGTGGACATATGGAATGTCATAGAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
3UTR GCA 90 bp ACTGCAAGTACCTGCCTTCCTTCTTTCAACAGACTGACTCCACGTTaGTTTAGGAAAGATTCACTGAAACAAAGGAATAAACCACCCAAG +
Preference number: 1 (lower is better)
Translates to: TASTCLPSFNRLTPR*FRKDSLKQRNKPPK
Trigger: CTTGGGTGGTTTATTCCTTTGTTTCAGTGAATCTTTCCTAAAGCAACGTGGAGTCAGTCTGTTGAAAGAAGGAAGGCAGGTACTTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000680767.1
3UTR GCA 90 bp AAGATTTCTCTGTTCTTGTTTTCTAGCTCAGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATGGTGAAAGAGATGTCAGGAGCACTT +
Preference number: 1 (lower is better)
Translates to: KISLFLFSSSAISCL*CLFASMVKEMSGAL
Trigger: AAGTGCTCCTGACATCTCTTTCACCATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR GCA 90 bp TCCTGTAAGATTTCTCTGTTCTTGTTTTCTAGCTCAGCAATCAGCTaGCTTTGCTGCTTATTCGCATCGATGGTGAAAGAGATGTCAGGA +
Preference number: 1 (lower is better)
Translates to: SCKISLFLFSSSAIS*LCCLFASMVKEMSG
Trigger: TCCTGACATCTCTTTCACCATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTTACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR CCA 90 bp ATCTTGAAAGAAAACAACCTCGAGTTGGAAAGAGGCCCCAAAGAATaGATTATTCCTGGTGTGTTTGGTTCAAGTCACTGCTCACAGAGA +
Preference number: 1 (lower is better)
Translates to: ILKENNLELERGPKE*IIPGVFGSSHCSQR
Trigger: TCTCTGTGAGCAGTGACTTGAACCAAACACACCAGGAATAATCCATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTCTTTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CCA 90 bp GTTAAAGACATGCTTCCTAAAGCCAAAACGAGAGGAACAAGACCATaGAAGAGCAGAGATAACTTTAGTCCGTTTGGGGATCTTATGGCA +
Preference number: 1 (lower is better)
Translates to: VKDMLPKAKTRGTRP*KSRDNFSPFGDLMA
Trigger: TGCCATAAGATCCCCAAACGGACTAAAGTTATCTCTGCTCTTCCATGGTCTTGTTCCTCTCGTTTTGGCTTTAGGAAGCATGTCTTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR TCA 90 bp GGGGAAGGTTATCAGCAGAACAGTTCAAATCTTAGACGAACATTTTaGTGTAGAAACACAAAGAAACAACATATGCCAGCTCGGTCCAGT +
Preference number: 1 (lower is better)
Translates to: GEGYQQNSSNLRRTF*CRNTKKQHMPARSS
Trigger: ACTGGACCGAGCTGGCATATGTTGTTTCTTTGTGTTTCTACATCAAAATGTTCGTCTAAGATTTGAACTGTTCTGCTGATAACCTTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR GCA 90 bp TTTACCATGAGAAGTCTATATTTGGACAGCATTTGTTTATTTCCTTaGAGAACCGCCTCTATAGGGCTGGGATTGATAAGGTTCTGCTTT +
Preference number: 1 (lower is better)
Translates to: FTMRSLYLDSICLFP*RTASIGLGLIRFCF
Trigger: AAAGCAGAACCTTATCAATCCCAGCCCTATAGAGGCGGTTCTGCAAGGAAATAAACAAATGCTGTCCAAATATAGACTTCTCATGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR CAA 90 bp GAAGGTGAGGGGGCAGTGGCGCCACCTTGGGGGCACTGCCACAGTTaGGCTCTGTGCATCCATCTGTTTACGAACTTCCTGGTCCATAGG +
Preference number: 2 (lower is better)
Translates to: EGEGAVAPPWGHCHS*ALCIHLFTNFLVHR
Trigger: CCTATGGACCAGGAAGTTCGTAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTGGCGCCACTGCCCCCTCACCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR-3UTR TCA 90 bp AGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAAGGTTCCTCTCTTCGGTaGGGCTGCTGCCAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: RTVEFSLVAPCVESNQGEGSSLR*GCCQAA
Trigger: AGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACC...TTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp ACAAAGAAACAACATATGCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCGGTTCCTCTCTTCGGTaGGGCTGCTGCCAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: TKKQHMPARSSQWWSATCGSSLR*GCCQAA
Trigger: AGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACC...GCACGTGGCACTCCACCACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp TACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGGAGCTAAGAGAGCCAAACGCAGACATGTaGACATCGTACAGCCGCCCT +
Preference number: 2 (lower is better)
Translates to: YRTGVLESGLSADVELREPNADM*TSYSRP
Trigger: AGGGCGGCTGTACGATGTTCACATGTCTGCGTTTGG...CTCTCTTAGCTCCACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp GCGGCGTGTGCGTCGGGGTGGAGCAGGCTGACGCTGACCGGATGGGCATGGGAATGTTGGATTTGTAACTaGACAAAGGTCACAATTCCA +
Preference number: 2 (lower is better)
Translates to: AACASGWSRLTLTGWAWECWICN*TKVTIP
Trigger: TGGAATTGTGACCTTTGTGCAGTTACAAATCCAACA...TTCCCATGCCCATCCGGTCAGCGTCAGCCTGCTCCACCCCGACGCACACGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR GCA 90 bp GTGGAGAGCACAGCCTCTAAGCGGGACACGTTGAGTTCAGTGTTTGGGTCCAGGAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 2 (lower is better)
Translates to: VESTASKRDTLSSVFGSRRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...CCTGGACCCAAACACTGAACTCAACGTGTCCCGCTTAGAGGCTGTGCTCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
3UTR-3UTR CCA 90 bp ATGAGGCACCAGTGGCCACCTGCTCCATCTAGAGAGGTATGGGTTCACAGAGGAAGCTGCTGGGTGTGGTaGTTCCTCTCTTCGGTGAGG +
Preference number: 2 (lower is better)
Translates to: MRHQWPPAPSREVWVHRGSCWVW*FLSSVR
Trigger: CCTCACCGAAGAGAGGAACCACCACACCCAGCAGCT...TCCTCTGTGAACCCATACCTCTCTAGATGGAGCAGGTGGCCACTGGTGCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCGGTCCAGTCAGTaGTGGAGTGCCACGTGCAGG +
Preference number: 2 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSARSSQ*WSATCR
Trigger: CCTGCACGTGGCACTCCACCACTGACTGGACCGAGC...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp CAGAGTGGGAGAACAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGAGCAAAGGTTCACGGCTaGAAGCACAGCTCAGGGACT +
Preference number: 2 (lower is better)
Translates to: QSGRTGCRSCWLQVWEARAKVHG*KHSSGT
Trigger: AGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGC...TCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTGTTCTCCCACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
3UTR CAA 90 bp TTCTCTGCTGAGGTGGCTGAGACGAAGAGGACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTAGCCTGTGTTCTTCATCAAGCCGGT +
Preference number: 2 (lower is better)
Translates to: FSAEVAETKRTLLPA*PHTWQLACVLHQAG
Trigger: ACCGGCTTGATGAAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCTCAGCCACCTCAGCAGAGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR TCA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGTCTGCAGAGGGGGCATaGAGATGTCAGGACTTGGCT +
Preference number: 2 (lower is better)
Translates to: FCLAYRTGVLESGLSADVSAEGA*RCQDLA
Trigger: AGCCAAGTCCTGACATCTTCATGCCCCCTCTGCAGA...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp ATGAGGCACCAGTGGCCACCTGCTCCATCTAGAGAGGTATGGGTTCACAGAGGAGGGCAGCCAAGGAGATaGTGTCTGACCAAACGCAGA +
Preference number: 2 (lower is better)
Translates to: MRHQWPPAPSREVWVHRGGQPRR*CLTKRR
Trigger: TCTGCGTTTGGTCAGACATCATCTCCTTGGCTGCCC...TCCTCTGTGAACCCATACCTCTCTAGATGGAGCAGGTGGCCACTGGTGCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTAGGCTGCTGCCAGGCTaGTGTCTTCCTCCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVARLLPG*CLPPLC
Trigger: ACACAGAGGAGGAAGACAGCAGCCTGGCAGCAGCCT...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCAGGAGCTGCTGGGTGTaGTGGTTCCTCTCTTCGGTG +
Preference number: 2 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCRSCWV*WFLSSV
Trigger: CACCGAAGAGAGGAACCACCACACCCAGCAGCTCCT...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp CAGAGTGGGAGAACAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGACTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 2 (lower is better)
Translates to: QSGRTGCRSCWLQVWEARLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...TCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTGTTCTCCCACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
3UTR-3UTR TCA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCATGCGATCCAGATCTTaGGCCCTAGGCTCCTTGCTC +
Preference number: 2 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCMRSRS*ALGSLL
Trigger: GAGCAAGGAGCCTAGGGCTCAAGATCTGGATCGCAT...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR TCA 90 bp TGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTGCTTAATGCATGTCTGGTCTCAGTGCTaGCGTGGAGTTGAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: WGAKVHGWKHSSGTCLMHVWSQC*RGVERS
Trigger: ACTCCTCTCAACTCCACGTCAGCACTGAGACCAGAC...ATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR TCA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGTCTGGTCTCAGTGCTaGCGTGGAGTTGAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVAVWSQC*RGVERS
Trigger: ACTCCTCTCAACTCCACGTCAGCACTGAGACCAGAC...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
3UTR-3UTR GCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTAGGCTGCTGCCAGGCTaGTGTCTTCCTCCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPRLLPG*CLPPLC
Trigger: ACACAGAGGAGGAAGACAGCAGCCTGGCAGCAGCCT...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAAGGGTCTGTCAGGAGCTaGTGGGTGTGGTGGTTCCTC +
Preference number: 2 (lower is better)
Translates to: MPFLLRTVEFSLVAPCVEGSVRS*WVWWFL
Trigger: GAGGAACCACCACACCCAGCAGCTCCTGACAGACCC...TTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp AGCCAAGTTGAGTGGCTTCTCAGGCTGATCTGGGAACATGGGGTGCAAAGGTTCAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 2 (lower is better)
Translates to: SQVEWLLRLIWEHGVQRFRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...GAACCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGCCACTCAACTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR GCA 90 bp AGAGTGGGAGAACAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGATTCTGGGAACATGGGGTaGAAAGGTTCACGGCTGGAA +
Preference number: 2 (lower is better)
Translates to: RVGEQGVVHAGYRSGRHDSGNMG*KGSRLE
Trigger: TTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGA...ATCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTGTTCTCCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
3UTR-3UTR CCA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCAGCTGCTGGGTGTGGTaGTTCCTCTCTTCGGTGAGG +
Preference number: 2 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGISCWVW*FLSSVR
Trigger: CCTCACCGAAGAGAGGAACCACCACACCCAGCAGCT...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp AGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAAGCCAAGGACCCTTCTTaGCTTCCGGGCTCTGAGTTT +
Preference number: 2 (lower is better)
Translates to: RTVEFSLVAPCVESNQGEAKDPS*LPGSEF
Trigger: AAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGC...TTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGCCAAGGACCCTTCTTaGCTTCCGGGCTCTGAGTTT +
Preference number: 2 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVAAKDPS*LPGSEF
Trigger: AAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGC...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTCGGTCCAGTCAGTGGTaGAGTGCCACGTGCAGGATT +
Preference number: 2 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPRSSQW*SATCRI
Trigger: AATCCTGCACGTGGCACTCCACCACTGACTGGACCG...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GGACCATTAGCTCTCTCCGGCTCTCCTGGAGAGCAGACATTCTCTGTTCCAGCTGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 2 (lower is better)
Translates to: GPLALSGSPGEQTFSVPAVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...AGCTGGAACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGAGCTAATGGTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR TCA 90 bp AAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAAGGTTCCTCTCTTCGGTaGGGCTGCTGCCAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: KATCRTPGGQLRQSTFRKGSSLR*GCCQAA
Trigger: AGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACC...TTTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp TGGCGCCACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTATTAGAGCAAAAGCAATaGGAAAACCGCAGGTCGGCA +
Preference number: 2 (lower is better)
Translates to: WRHLGGTATVWLCASICLLEQKQ*ENRRSA
Trigger: TGCCGACCTGCGGTTTTCTCATTGCTTTTGCTCTAA...TAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTGGCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR-3UTR TCA 90 bp GCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGCAAGGCTGATGACGACAGGATaGTTGCCCTCTCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: AAWEMAWKVSPREMAKARLMTTG*LPSLSA
Trigger: AGCAGAGAGAGAGGGCAATCATCCTGTCGTCATCAG...CCTTGCTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR-3UTR TCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCCTGCGGGGGAGGATCTaGCATAAGCGTGTCCAAGAA +
Preference number: 2 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSLRGRI*HKRVQE
Trigger: TTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAG...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR GCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGAGGCTGCTGCCAGGCTaGTGTCTTCCTCCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: ESHAVDFTFLPSSINMALRLLPG*CLPPLC
Trigger: ACACAGAGGAGGAAGACAGCAGCCTGGCAGCAGCCT...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp CTTGCTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAGGCTGCTGCCAGGCTaGTGTCTTCCTCCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: LAGFALRTGPKSKSGEPRRLLPG*CLPPLC
Trigger: ACACAGAGGAGGAAGACAGCAGCCTGGCAGCAGCCT...CCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCCCACAGAAGGCTACATaGAGAACACCAGGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSPQKAT*RTPGGQ
Trigger: CTGGCCACCTGGTGTTCTGCATGTAGCCTTCTGTGG...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp AGGCAAGAGAAGGTGAGCTATTTTGCCTCGGTGGCTCAATATTCCATCAATGGGCGTACAGCCGCCCTCTaGAGAGGGGGCATGAAGATG +
Preference number: 2 (lower is better)
Translates to: RQEKVSYFASVAQYSINGRTAAL*RGGMKM
Trigger: CATCTTCATGCCCCCTCTGCAGAGGGCGGCTGTACG...CCCATTGATGGAATATTGAGCCACCGAGGCAAAATAGCTCACCTTCTCTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
3UTR-3UTR GCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCCTTACAGGACAGGGGTaGTCGAGTCTGGTCTCAGTG +
Preference number: 2 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSLTGQG*SSLVSV
Trigger: CACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAG...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGAGGAGCTGCTGGGTGTaGTGGTTCCTCTCTTCGGTG +
Preference number: 2 (lower is better)
Translates to: ESHAVDFTFLPSSINMALRSCWV*WFLSSV
Trigger: CACCGAAGAGAGGAACCACCACACCCAGCAGCTCCT...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCAAAGGTTCACGGCTaGAAGCACAGCTCAGGGACT +
Preference number: 2 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVAKVHG*KHSSGT
Trigger: AGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGC...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR CCA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 2 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR TCA 90 bp TTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACGGTTCCTCTCTTCGGTaGGGCTGCTGCCAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: FKNPFFTISSTTPSDQPNGSSLR*GCCQAA
Trigger: AGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACC...GTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCATTGGCTTCCGGGCTCTaGGTTTGTACACTCAGGAAC +
Preference number: 2 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSLASGL*VCTLRN
Trigger: GTTCCTGAGTGTACAAACTCAGAGCCCGGAAGCCAA...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTGGCTTCCGGGCTCTaGGTTTGTACACTCAGGAAC +
Preference number: 2 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLLASGL*VCTLRN
Trigger: GTTCCTGAGTGTACAAACTCAGAGCCCGGAAGCCAA...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp GCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCAGGATTTAAGTTCTGAGGCAGTGGAAAAGAGATaGACATTAAGACACCCCAAC +
Preference number: 2 (lower is better)
Translates to: ASSVQSVVECHVQDLSSEAVEKR*TLRHPN
Trigger: GTTGGGGTGTCTTAATGTTCATCTCTTTTCCACTGC...CTCAGAACTTAAATCCTGCACGTGGCACTCCACCACTGACTGGACCGAGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGTGCTGACGTGGAGTTaGGAGGAGTGTGATAAAAGG +
Preference number: 2 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVAVLTWS*EECDKR
Trigger: CCTTTTATCACACTCCTCTCAACTCCACGTCAGCAC...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
3UTR-3UTR TCA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTAGTCTGGTCTCAGTGCTaGCGTGGAGTTGAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: PCVESNQGECSNQRLLDLVWSQC*RGVERS
Trigger: ACTCCTCTCAACTCCACGTCAGCACTGAGACCAGAC...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
3UTR-3UTR GCA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATGGGTCTGTCAGGAGCTaGTGGGTGTGGTGGTTCCTC +
Preference number: 2 (lower is better)
Translates to: LFPESHAVDFTFLPSSINGSVRS*WVWWFL
Trigger: GAGGAACCACCACACCCAGCAGCTCCTGACAGACCC...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp CTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAAAGGAGCTGCTGGGTGTaGTGGTTCCTCTCTTCGGTG +
Preference number: 2 (lower is better)
Translates to: LSSKDSGVLTCGSLRGIERSCWV*WFLSSV
Trigger: CACCGAAGAGAGGAACCACCACACCCAGCAGCTCCT...TTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp AGTTGTGCCACTTTGGTGTCAGCCTGTGCTCAGAGACATTTGTCAGGTGAGTTCTCTGTCAGGAGCTGCTaGGTGTGGTGGTTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: SCATLVSACAQRHLSGEFSVRSC*VWWFLS
Trigger: AGAGAGGAACCACCACACCCAGCAGCTCCTGACAGA...GAACTCACCTGACAAATGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTAGCAGTTGTGCCACTTTaGTGTCAGCCTGTGCTCAGA +
Preference number: 2 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLAVVPL*CQPVLR
Trigger: TCTGAGCACAGGCTGACACCAAAGTGGCACAACTGC...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACGAGTGCTGTGGGTTTTaGGATGACATGAACCTCAGG +
Preference number: 2 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYECCGF*DDMNLR
Trigger: CCTGAGGTTCATGTCATCCCAAAACCCACAGCACTC...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
3UTR-3UTR CCA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 2 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR CAA 90 bp GGATTATTCCTGGTGTGTTTGGTTCAAGTCACTGCTCACAGAGACTaGGAGTCAACTACAGACCGTGCAGGCCAAGGACCCTTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: GLFLVCLVQVTAHRD*ESTTDRAGQGPFLA
Trigger: AGCCAAGAAGGGTCCTTGGCCTGCACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAACACACCAGGAATAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGATTGGCTTCCGGGCTCTaGGTTTGTACACTCAGGAAC +
Preference number: 2 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGLASGL*VCTLRN
Trigger: GTTCCTGAGTGTACAAACTCAGAGCCCGGAAGCCAA...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGGCAGTGGAAAAGAGATaGACATTAAGACACCCCAAC +
Preference number: 2 (lower is better)
Translates to: FCLAYRTGVLESGLSADVAVEKR*TLRHPN
Trigger: GTTGGGGTGTCTTAATGTTCATCTCTTTTCCACTGC...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGTTAGAGCAAAAGCAATaGGAAAACCGCAGGTCGGCA +
Preference number: 2 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRLEQKQ*ENRRSA
Trigger: TGCCGACCTGCGGTTTTCTCATTGCTTTTGCTCTAA...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
3UTR-3UTR TCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTAGAGCAAAAGCAATaGGAAAACCGCAGGTCGGCA +
Preference number: 2 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYLEQKQ*ENRRSA
Trigger: TGCCGACCTGCGGTTTTCTCATTGCTTTTGCTCTAA...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
3UTR-3UTR TCA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 2 (lower is better)
Translates to: PCVESNQGECSNQRLLDLLSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR TCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFLGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR GCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGGGGTCTGTCAGGAGCTaGTGGGTGTGGTGGTTCCTC +
Preference number: 2 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKGSVRS*WVWWFL
Trigger: GAGGAACCACCACACCCAGCAGCTCCTGACAGACCC...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTAAGAACTGTGCAGTTGTaGCACTTTGGTGTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLRTVQL*HFGVSL
Trigger: CAGGCTGACACCAAAGTGGCACAACTGCACAGTTCT...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACAGGTTAGCTTCTGAGTaGTGTGGGTTTTGGGATGAC +
Preference number: 2 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYRLASE*CGFWDD
Trigger: GTCATCCCAAAACCCACAGCACTCAGAAGCTAACCT...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
3UTR-3UTR GCA 90 bp GCTTCTGTTTCAGGTATTCCTCCATCTGGAGCTCATTCTCCAGCTGCCGGACAGTCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 2 (lower is better)
Translates to: ASVSGIPPSGAHSPAAGQSFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...CTGTCCGGCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCTGAAACAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR GCA 90 bp GCTTCTGTTTCAGGTATTCCTCCATCTGGAGCTCATTCTCCAGCTGCCGGACAGATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTG +
Preference number: 2 (lower is better)
Translates to: ASVSGIPPSGAHSPAAGQISCLC*LFASMV
Trigger: CACCATCGATGCGAATAAGCAGCAAAGGCAGCTGAT...CTGTCCGGCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCTGAAACAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR CCA 90 bp GCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCAGGATTTAAGTTCTGAGCGTTTGGGGATCTTATaGCACCTGTGGTTTATAAAC +
Preference number: 2 (lower is better)
Translates to: ASSVQSVVECHVQDLSSERLGIL*HLWFIN
Trigger: GTTTATAAACCACAGGTGCCATAAGATCCCCAAACG...CTCAGAACTTAAATCCTGCACGTGGCACTCCACCACTGACTGGACCGAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGTACCAACTACGAACTTaGTGTGTGGGTTCAGAGAAG +
Preference number: 2 (lower is better)
Translates to: FCLAYRTGVLESGLSADVYQLRT*CVGSEK
Trigger: CTTCTCTGAACCCACACACCAAGTTCGTAGTTGGTA...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAATGTCAGGACTTGGCTaGGCACCTACCAACTACGAA +
Preference number: 2 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSMSGLG*APTNYE
Trigger: TTCGTAGTTGGTAGGTGCCCAGCCAAGTCCTGACAT...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTAGAAGATGTCAGGACTTaGCTGGGCACCTACCAACTA +
Preference number: 2 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLEDVRT*LGTYQL
Trigger: TAGTTGGTAGGTGCCCAGCCAAGTCCTGACATCTTC...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCACCATCTAGAGAGGTATaGGTTCACAGAGGATGGGCA +
Preference number: 2 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSPSREV*VHRGWA
Trigger: TGCCCATCCTCTGTGAACCCATACCTCTCTAGATGG...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCGCTCGGTCCAGTCAGTaGTGGAGTGCCACGTGCAGG +
Preference number: 2 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSARSSQ*WSATCR
Trigger: CCTGCACGTGGCACTCCACCACTGACTGGACCGAGC...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CAA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTaGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCT +
Preference number: 2 (lower is better)
Translates to: NALSSKDSGVLTCGS*RGIEPRGMQQPKVA
Trigger: AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTCTTTTTAACCAGGGATaGACCACGTTACAGAGGATG +
Preference number: 2 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVALFNQG*TTLQRM
Trigger: CATCCTCTGTAACGTGGTTCATCCCTGGTTAAAAAG...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGTAGAGGTTAGCTTCTaGGTGCTGTGGGTTTTGGGA +
Preference number: 2 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFVEVSF*VLWVLG
Trigger: TCCCAAAACCCACAGCACTCAGAAGCTAACCTCTAC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
3UTR-3UTR TCA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAAGTGCTGACGTGGAGTTaGGAGGAGTGTGATAAAAGG +
Preference number: 2 (lower is better)
Translates to: MPFLLRTVEFSLVAPCVEVLTWS*EECDKR
Trigger: CCTTTTATCACACTCCTCTCAACTCCACGTCAGCAC...TTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
3UTR-3UTR TCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGGTGCTGACGTGGAGTTaGGAGGAGTGTGATAAAAGG +
Preference number: 2 (lower is better)
Translates to: ESHAVDFTFLPSSINMALVLTWS*EECDKR
Trigger: CCTTTTATCACACTCCTCTCAACTCCACGTCAGCAC...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
3UTR-3UTR TCA 90 bp TGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCGTGCTGACGTGGAGTTaGGAGGAGTGTGATAAAAGG +
Preference number: 2 (lower is better)
Translates to: CGGGLAVLDQCLLTGYQLVLTWS*EECDKR
Trigger: CCTTTTATCACACTCCTCTCAACTCCACGTCAGCAC...GAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
3UTR-3UTR TCA 90 bp ATTTTACCATGGCCTTCCGGATCAAACGCTGCAAGCAGGAAGTTAAGGAGGAGGTCCACATGGATTTGGTaGGTGGTTGGCATCCGTTTG +
Preference number: 2 (lower is better)
Translates to: ILPWPSGSNAASRKLRRRSTWIW*VVGIRL
Trigger: CAAACGGATGCCAACCACTCACCAAATCCATGTGGA...CCTCCTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAAGGCCATGGTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR GCA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACGGGTCTGTCAGGAGCTaGTGGGTGTGGTGGTTCCTC +
Preference number: 2 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNGSVRS*WVWWFL
Trigger: GAGGAACCACCACACCCAGCAGCTCCTGACAGACCC...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp ACAAAGAAACAACATATGCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCTTTGGTTCAAGTCACTaGTCACAGAGACTTGGAGTC +
Preference number: 2 (lower is better)
Translates to: TKKQHMPARSSQWWSATCFGSSH*SQRLGV
Trigger: GACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAA...GCACGTGGCACTCCACCACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCCGTACAGCCGCCCTCTaGAGAGGGGGCATGAAGATG +
Preference number: 2 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVRTAAL*RGGMKM
Trigger: CATCTTCATGCCCCCTCTGCAGAGGGCGGCTGTACG...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAGCTGCTGGGTGTGGTaGTTCCTCTCTTCGGTGAGG +
Preference number: 2 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKSCWVW*FLSSVR
Trigger: CCTCACCGAAGAGAGGAACCACCACACCCAGCAGCT...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACAGGAGCTGCTGGGTGTaGTGGTTCCTCTCTTCGGTG +
Preference number: 2 (lower is better)
Translates to: FKNPFFTISSTTPSDQPNRSCWV*WFLSSV
Trigger: CACCGAAGAGAGGAACCACCACACCCAGCAGCTCCT...GTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGTCTAAAGAGGGTCCTTaGAAAAGACTATCCCAGTCT +
Preference number: 2 (lower is better)
Translates to: FCLAYRTGVLESGLSADVSKEGP*KRLSQS
Trigger: AGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGA...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp AGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGGGGTACCATGCACCCTaGAGGAACCAGAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: SFIEQHPQNRNRRPISVVGYHAP*RNQNSS
Trigger: TGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCC...CACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
3UTR-3UTR CCA 90 bp ACAGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGGGGTACCATGCACCCTaGAGGAACCAGAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: TALLNSTLKTETVGQSLWGYHAP*RNQNSS
Trigger: TGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCC...CCACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
3UTR-3UTR CCA 90 bp CACAGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGGGTACCATGCACCCTaGAGGAACCAGAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: HSFIEQHPQNRNRRPISVGYHAP*RNQNSS
Trigger: TGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCC...CACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
3UTR-3UTR CCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAGAGTGCTGTGGGTTTTaGGATGACATGAACCTCAGG +
Preference number: 2 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKECCGF*DDMNLR
Trigger: CCTGAGGTTCATGTCATCCCAAAACCCACAGCACTC...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
3UTR-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGAGTGCTGTGGGTTTTaGGATGACATGAACCTCAGG +
Preference number: 2 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFECCGF*DDMNLR
Trigger: CCTGAGGTTCATGTCATCCCAAAACCCACAGCACTC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
3UTR-3UTR CCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 2 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR CAA 90 bp AACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGCTTCTTAGCAGGTGATTTCCATGAC +
Preference number: 2 (lower is better)
Translates to: NMGCKGSRLEAQLRD*LNALVSFLAGDFHD
Trigger: GTCATGGAAATCACCTGCTAAGAAGCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR TCA 90 bp AGTTGTGCCACTTTGGTGTCAGCCTGTGCTCAGAGACATTTGTCAGGTGAGTTCTATCCCCAAGGCAAGTaGTTTGGTTTCAAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: SCATLVSACAQRHLSGEFYPQGK*FGFKGQ
Trigger: CTGCCCTTTGAAACCAAATCACTTGCCTTGGGGATA...GAACTCACCTGACAAATGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCACTCACTAATGCCAATTaGGCACTTTATCCCCAAGGC +
Preference number: 2 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPLTNAN*ALYPQG
Trigger: GCCTTGGGGATAAAGTGCTCAATTGGCATTAGTGAG...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCGCAGTGGAAAAGAGATaGACATTAAGACACCCCAAC +
Preference number: 2 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSAVEKR*TLRHPN
Trigger: GTTGGGGTGTCTTAATGTTCATCTCTTTTCCACTGC...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAGGAGTTGGTTGGCAATaGAATAGCTATGACAACGGG +
Preference number: 2 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPGVGWQ*NSYDNG
Trigger: CCCGTTGTCATAGCTATTTCATTGCCAACCAACTCC...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAATTAGAGCAAAAGCAATaGGAAAACCGCAGGTCGGCA +
Preference number: 2 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKLEQKQ*ENRRSA
Trigger: TGCCGACCTGCGGTTTTCTCATTGCTTTTGCTCTAA...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
3UTR-3UTR TCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACAAGCTAAGACTGGTTTaGAACTTATACCTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYKLRLV*NLYLWG
Trigger: TCCCCAGAGGTATAAGTTTCAAACCAGTCTTAGCTT...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
3UTR-3UTR TCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAGCTAAGACTGGTTTaGAACTTATACCTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRKLRLV*NLYLWG
Trigger: TCCCCAGAGGTATAAGTTTCAAACCAGTCTTAGCTT...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
3UTR-3UTR TCA 90 bp CACGTTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCGGTCACAATTCCAGGTaGAGACACAGTACCACACAT +
Preference number: 2 (lower is better)
Translates to: HVEFSVWVQVVQSIFPQCGHNSR*RHSTTH
Trigger: ATGTGTGGTACTGTGTCTTCACCTGGAATTGTGACC...GCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACTGAACTCAACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
3UTR-3UTR TCA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTGTCTGGTCTCAGTGCTaGCGTGGAGTTGAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTVWSQC*RGVERS
Trigger: ACTCCTCTCAACTCCACGTCAGCACTGAGACCAGAC...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
3UTR-3UTR GCA 90 bp ATGAGGCACCAGTGGCCACCTGCTCCATCTAGAGAGGTATGGGTTCACAGAGGACAGCCTGTGTTTGTTTaGTTTTTAACCAGGGATGAA +
Preference number: 2 (lower is better)
Translates to: MRHQWPPAPSREVWVHRGQPVFV*FLTRDE
Trigger: TTCATCCCTGGTTAAAAAGCAAACAAACACAGGCTG...TCCTCTGTGAACCCATACCTCTCTAGATGGAGCAGGTGGCCACTGGTGCCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTTTTGGTTCAAGTCACTaGTCACAGAGACTTGGAGTC +
Preference number: 2 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVFGSSH*SQRLGV
Trigger: GACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAA...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAAGGTTAGCTTCTGAGTaGTGTGGGTTTTGGGATGAC +
Preference number: 2 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKRLASE*CGFWDD
Trigger: GTCATCCCAAAACCCACAGCACTCAGAAGCTAACCT...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
3UTR-3UTR GCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTAGGTTAGCTTCTGAGTaGTGTGGGTTTTGGGATGAC +
Preference number: 2 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFRLASE*CGFWDD
Trigger: GTCATCCCAAAACCCACAGCACTCAGAAGCTAACCT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
3UTR-3UTR GCA 90 bp ACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: TKGNAATKGCWIYKIYLRTGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...CCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR CCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTAGCTGCTGGGTGTGGTaGTTCCTCTCTTCGGTGAGG +
Preference number: 2 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFSCWVW*FLSSVR
Trigger: CCTCACCGAAGAGAGGAACCACCACACCCAGCAGCT...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACAGGAGCTGCTGGGTGTaGTGGTTCCTCTCTTCGGTG +
Preference number: 2 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNRSCWV*WFLSSV
Trigger: CACCGAAGAGAGGAACCACCACACCCAGCAGCTCCT...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTCTGTCAGGAGCTGCTaGGTGTGGTGGTTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTSVRSC*VWWFLS
Trigger: AGAGAGGAACCACCACACCCAGCAGCTCCTGACAGA...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGGCCAAGGACCCTTCTTaGCTTCCGGGCTCTGAGTTT +
Preference number: 2 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKAKDPS*LPGSEF
Trigger: AAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGC...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp ACAAAGAAACAACATATGCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCAAAACAACCTCGAGTTaGAAAGAGGCCCCAAAGAAT +
Preference number: 2 (lower is better)
Translates to: TKKQHMPARSSQWWSATCKTTSS*KEAPKN
Trigger: ATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTT...GCACGTGGCACTCCACCACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp AGTTGTGCCACTTTGGTGTCAGCCTGTGCTCAGAGACATTTGTCAGGTGAGTTCCCAAGGCAAGTGATTTaGTTTCAAAGGGCAGCCAAG +
Preference number: 2 (lower is better)
Translates to: SCATLVSACAQRHLSGEFPRQVI*FQRAAK
Trigger: CTTGGCTGCCCTTTGAAACCAAATCACTTGCCTTGG...GAACTCACCTGACAAATGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCAGGATTTAAGTTCTGAGAGCATTATAGGTAGCTaGGATGTAGTGGTTTTCAAT +
Preference number: 2 (lower is better)
Translates to: ASSVQSVVECHVQDLSSESIIGS*DVVVFN
Trigger: ATTGAAAACCACTACATCCCAGCTACCTATAATGCT...CTCAGAACTTAAATCCTGCACGTGGCACTCCACCACTGACTGGACCGAGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGGAGCTAAGAGAGAGCATTATAGGTAGCTaGGATGTAGTGGTTTTCAAT +
Preference number: 2 (lower is better)
Translates to: YRTGVLESGLSADVELRESIIGS*DVVVFN
Trigger: ATTGAAAACCACTACATCCCAGCTACCTATAATGCT...CTCTCTTAGCTCCACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCGGTCCAGTCAGTGGTaGAGTGCCACGTGCAGGATT +
Preference number: 2 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSRSSQW*SATCRI
Trigger: AATCCTGCACGTGGCACTCCACCACTGACTGGACCG...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCATCAGAAATTGGTCATTaGCGGCAGTTTCCAGAGTCC +
Preference number: 2 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPSEIGH*RQFPES
Trigger: GGACTCTGGAAACTGCCGCCAATGACCAATTTCTGA...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTTGGTTAGTCAGAAATTaGTCATTGGCGGCAGTTTCC +
Preference number: 2 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPWLVRN*SLAAVS
Trigger: GGAAACTGCCGCCAATGACCAATTTCTGACTAACCA...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGAAGAGAGAGAAAAGGTaGCTGGTTAGTCAGAAATTG +
Preference number: 2 (lower is better)
Translates to: FCLAYRTGVLESGLSADVKREKR*LVSQKL
Trigger: CAATTTCTGACTAACCAGCCACCTTTTCTCTCTCTT...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCCTCCTCCATTAATATaGCGCTGTGGAGGAGGGTTG +
Preference number: 2 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFPPPLI*RCGGGL
Trigger: CAACCCTCCTCCACAGCGCCATATTAATGGAGGAGG...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACCATTTTGGTGAGCCATaGGGAACAAGGCTCAATAAT +
Preference number: 2 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYHFGEP*GTRLNN
Trigger: ATTATTGAGCCTTGTTCCCCATGGCTCACCAAAATG...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
3UTR-3UTR CCA 90 bp CACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTACGAACTGTAAGGATTCTGCTTTaGGGAAGAGCCAAAAAGATG +
Preference number: 2 (lower is better)
Translates to: HLGGTATVWLCASICLRTVRILL*GRAKKM
Trigger: CATCTTTTTGGCTCTTCCCCAAAGCAGAATCCTTAC...AGTTCGTAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR-3UTR CCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGGTAAGGATTCTGCTTTaGGGAAGAGCCAAAAAGATG +
Preference number: 2 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRVRILL*GRAKKM
Trigger: CATCTTTTTGGCTCTTCCCCAAAGCAGAATCCTTAC...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
3UTR-3UTR CCA 90 bp GTTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCTTCATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA +
Preference number: 2 (lower is better)
Translates to: VEFSVWVQVVQSIFPQCFMLFCR*RVGCDP
Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...GAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACTGAACTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
3UTR-3UTR TCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGGTTCCTCTCTTCGGTaGGGCTGCTGCCAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAGSSLR*GCCQAA
Trigger: AGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCGGGCAGCCAAGGAGATaGTGTCTGACCAAACGCAGA +
Preference number: 2 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVGQPRR*CLTKRR
Trigger: TCTGCGTTTGGTCAGACATCATCTCCTTGGCTGCCC...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTCTCTCACAAAATTaGGCACATTTTGGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYFLSQN*AHFGEP
Trigger: TGGCTCACCAAAATGTGCTCAATTTTGTGAGAGAAA...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
3UTR-3UTR GCA 90 bp GTGCAAAAATCCCAACTCAACTTAGAAGAGCCTGTCTCCTTTCACATGACCACAGTCAACTACAGACCGTaGAGGCCAAGGACCCTTCTT +
Preference number: 2 (lower is better)
Translates to: VQKSQLNLEEPVSFHMTTVNYRP*RPRTLL
Trigger: AAGAAGGGTCCTTGGCCTGCACGGTCTGTAGTTGAC...TGTGGTCATGTGAAAGGAGACAGGCTCTTCTAAGTTGAGTTGGGATTTTTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp GCCAAAACGAGAGGAACAAGACCATGGAAGAGCAGAGATAACTTTAGTCCGTTTGTCAACTACAGACCGTaGAGGCCAAGGACCCTTCTT +
Preference number: 2 (lower is better)
Translates to: AKTRGTRPWKSRDNFSPFVNYRP*RPRTLL
Trigger: AAGAAGGGTCCTTGGCCTGCACGGTCTGTAGTTGAC...AAACGGACTAAAGTTATCTCTGCTCTTCCATGGTCTTGTTCCTCTCGTTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCATTTGGTTCAAGTCACTaGTCACAGAGACTTGGAGTC +
Preference number: 2 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPFGSSH*SQRLGV
Trigger: GACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAA...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp GCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGCAAGGGCAATACCCCATGTATaGATTCATGGGCAATTATAC +
Preference number: 2 (lower is better)
Translates to: AAWEMAWKVSPREMAKARAIPHV*IHGQLY
Trigger: GTATAATTGCCCATGAATGCATACATGGGGTATTGC...CCTTGCTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR-3UTR GCA 90 bp TGCTGTTCTGTAGGTGGAGAGTCGGATGCGATCCAGATCTTGAGCCCTAGGCTCTGTTGGATTTGTAACTaGACAAAGGTCACAATTCCA +
Preference number: 2 (lower is better)
Translates to: CCSVGGESDAIQILSPRLCWICN*TKVTIP
Trigger: TGGAATTGTGACCTTTGTGCAGTTACAAATCCAACA...GAGCCTAGGGCTCAAGATCTGGATCGCATCCGACTCTCCACCTACAGAACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
3UTR-3UTR CCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTTCTGTCAGGAGCTGCTaGGTGTGGTGGTTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFSVRSC*VWWFLS
Trigger: AGAGAGGAACCACCACACCCAGCAGCTCCTGACAGA...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTGCTCACAGAGACTTaGAGTCAACTACAGACCGTG +
Preference number: 2 (lower is better)
Translates to: VESNQGECSNQRLLDLQDLLTET*SQLQTV
Trigger: CACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAG...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp ACAAAGAAACAACATATGCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCAGAGGAACAAGACCATaGAAGAGCAGAGATAACTTT +
Preference number: 2 (lower is better)
Translates to: TKKQHMPARSSQWWSATCRGTRP*KSRDNF
Trigger: AAAGTTATCTCTGCTCTTCCATGGTCTTGTTCCTCT...GCACGTGGCACTCCACCACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCATCTAAAGAGGGTCCTTaGAAAAGACTATCCCAGTCT +
Preference number: 2 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSSKEGP*KRLSQS
Trigger: AGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGA...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACGCAGTTGTGCCACTTTaGTGTCAGCCTGTGCTCAGA +
Preference number: 2 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNAVVPL*CQPVLR
Trigger: TCTGAGCACAGGCTGACACCAAAGTGGCACAACTGC...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCATGGTTAGTCAGAAATTaGTCATTGGCGGCAGTTTCC +
Preference number: 2 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPWLVRN*SLAAVS
Trigger: GGAAACTGCCGCCAATGACCAATTTCTGACTAACCA...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCGAGAGAAAAGGTGGCTaGTTAGTCAGAAATTGGTCA +
Preference number: 2 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSERKGG*LVRNWS
Trigger: TGACCAATTTCTGACTAACCAGCCACCTTTTCTCTC...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACGAAGAGCCAAAAAGATaGGACGTGAATAGTCAGTTA +
Preference number: 2 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYEEPKR*DVNSQL
Trigger: TAACTGACTATTCACGTCCCATCTTTTTGGCTCTTC...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
3UTR-3UTR CCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTACTGAAATTTTACCATaGCCTTCCGGATCAAACGCT +
Preference number: 2 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPTEILP*PSGSNA
Trigger: AGCGTTTGATCCGGAAGGCCATGGTAAAATTTCAGT...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR CAA 90 bp TCGAGTTGGAAAGAGGCCCCAAAGAATGGATTATTCCTGGTGTGTTaGGTTCAAGTCACTGCTCACAGAGACTTGGAGTCAACTACAGAC +
Preference number: 2 (lower is better)
Translates to: SSWKEAPKNGLFLVC*VQVTAHRDLESTTD
Trigger: GTCTGTAGTTGACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAACACACCAGGAATAATCCATTCTTTGGGGCCTCTTTCCAACTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CAA 90 bp GCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTaGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTA +
Preference number: 2 (lower is better)
Translates to: APCVESNQGECSNQR*LDLQDLSTVNSQEL
Trigger: TAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR CAA 90 bp AACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGCTTCTTAGCAGGTGATTTAGGAATT +
Preference number: 2 (lower is better)
Translates to: NMGCKGSRLEAQLRD*LNALVSFLAGDLGI
Trigger: AATTCCTAAATCACCTGCTAAGAAGCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681065.1
3UTR-3UTR TCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCTCACTAATGCCAATTaGGCACTTTATCCCCAAGGC +
Preference number: 2 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFLTNAN*ALYPQG
Trigger: GCCTTGGGGATAAAGTGCTCAATTGGCATTAGTGAG...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCTGTGCAAAGAAATCTaGGAACTGTGCAGTTGTGCC +
Preference number: 2 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFLCKEI*ELCSCA
Trigger: GGCACAACTGCACAGTTCTCAGATTTCTTTGCACAG...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp AGGCAAGAGAAGGTGAGCTATTTTGCCTCGGTGGCTCAATATTCCATCAATGGGCTTCTTTCAACAGACTaGCTCCACGTTGCTTTAGGA +
Preference number: 2 (lower is better)
Translates to: RQEKVSYFASVAQYSINGLLSTD*LHVALG
Trigger: TCCTAAAGCAACGTGGAGTCAGTCTGTTGAAAGAAG...CCCATTGATGGAATATTGAGCCACCGAGGCAAAATAGCTCACCTTCTCTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000680767.1
3UTR-3UTR TCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTAAGCTAAGACTGGTTTaGAACTTATACCTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFKLRLV*NLYLWG
Trigger: TCCCCAGAGGTATAAGTTTCAAACCAGTCTTAGCTT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
3UTR-3UTR TCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAAAGCTAAGACTGGTTTaGAACTTATACCTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKKLRLV*NLYLWG
Trigger: TCCCCAGAGGTATAAGTTTCAAACCAGTCTTAGCTT...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
3UTR-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGGGTCTGTCAGGAGCTaGTGGGTGTGGTGGTTCCTC +
Preference number: 2 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAGSVRS*WVWWFL
Trigger: GAGGAACCACCACACCCAGCAGCTCCTGACAGACCC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCACAGCTTTTCACTGAGTaGAAAAATCCCAACTCAACT +
Preference number: 2 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSQLFTE*KNPNST
Trigger: AGTTGAGTTGGGATTTTTGCACTCAGTGAAAAGCTG...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTCAGCTTTTCACTGAGTaGAAAAATCCCAACTCAACT +
Preference number: 2 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPQLFTE*KNPNST
Trigger: AGTTGAGTTGGGATTTTTGCACTCAGTGAAAAGCTG...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 2 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR CCA 90 bp AAATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTTCTGTCAGGAGCTGCTaGGTGTGGTGGTTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: KSICAKKSENCAVVPLWCSVRSC*VWWFLS
Trigger: AGAGAGGAACCACCACACCCAGCAGCTCCTGACAGA...ACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACATGTCAGGACTTGGCTaGGCACCTACCAACTACGAA +
Preference number: 2 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNMSGLG*APTNYE
Trigger: TTCGTAGTTGGTAGGTGCCCAGCCAAGTCCTGACAT...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCAGTATGAGGCACCAGTaGCCACCTGCTCCATCTAGA +
Preference number: 2 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSSMRHQ*PPAPSR
Trigger: TCTAGATGGAGCAGGTGGCCACTGGTGCCTCATACT...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTCATTTTGGTGAGCCATaGGGAACAAGGCTCAATAAT +
Preference number: 2 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFHFGEP*GTRLNN
Trigger: ATTATTGAGCCTTGTTCCCCATGGCTCACCAAAATG...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
3UTR-3UTR CCA 90 bp CACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTACGAACTGTGAATAGTCAGTTATaGAGTACAGTCTTTCTCTCA +
Preference number: 2 (lower is better)
Translates to: HLGGTATVWLCASICLRTVNSQL*STVFLS
Trigger: TGAGAGAAAGACTGTACTCCATAACTGACTATTCAC...AGTTCGTAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR-3UTR CCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAGTAAGGATTCTGCTTTaGGGAAGAGCCAAAAAGATG +
Preference number: 2 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKVRILL*GRAKKM
Trigger: CATCTTTTTGGCTCTTCCCCAAAGCAGAATCCTTAC...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
3UTR-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGTAAGGATTCTGCTTTaGGGAAGAGCCAAAAAGATG +
Preference number: 2 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFVRILL*GRAKKM
Trigger: CATCTTTTTGGCTCTTCCCCAAAGCAGAATCCTTAC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
3UTR-3UTR CCA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC +
Preference number: 2 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTGRNRI*LTVLCN
Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR CAA 90 bp GAGCTAAGAGAGAGAAAAGGTGGCTGGTTAGTCAGAAATTGGTCATaGGCGGCAGTTTCCAGAGTCCTTGCAATGGCTTTATATGACGAT +
Preference number: 2 (lower is better)
Translates to: ELRERKGGWLVRNWS*AAVSRVLAMALYDD
Trigger: ATCGTCATATAAAGCCATTGCAAGGACTCTGGAAACTGCCGCCAATGACCAATTTCTGACTAACCAGCCACCTTTTCTCTCTCTTAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTACTTTCTTGCTTATTCTaGATAAGGCCTTTTCAGAGA +
Preference number: 2 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLLSCLF*IRPFQR
Trigger: TCTCTGAAAAGGCCTTATTCAGAATAAGCAAGAAAG...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCCTCTGGAGAGATATATaGTTAAGTATGTCAAGGGAT +
Preference number: 2 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSLWRDI*LSMSRD
Trigger: ATCCCTTGACATACTTAATCATATATCTCTCCAGAG...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTTTCTCTCACAAAATTaGGCACATTTTGGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFFLSQN*AHFGEP
Trigger: TGGCTCACCAAAATGTGCTCAATTTTGTGAGAGAAA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
3UTR-3UTR TCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGGGTCACAATTCCAGGTaGAGACACAGTACCACACAT +
Preference number: 2 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKGHNSR*RHSTTH
Trigger: ATGTGTGGTACTGTGTCTTCACCTGGAATTGTGACC...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR GCA 90 bp ATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATAGGCTGCTGCCAGGCTaGTGTCTTCCTCCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: IHCGTRKKQPPQDVVVSNRLLPG*CLPPLC
Trigger: ACACAGAGGAGGAAGACAGCAGCCTGGCAGCAGCCT...ATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp TTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCTTCTAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 2 (lower is better)
Translates to: LSSVFGSRLFRAFSRNASKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...AGAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACTGAACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
3UTR-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTAGGAGCTGCTGGGTGTaGTGGTTCCTCTCTTCGGTG +
Preference number: 2 (lower is better)
Translates to: SFLKHTPMHYKSENKKLARSCWV*WFLSSV
Trigger: CACCGAAGAGAGGAACCACCACACCCAGCAGCTCCT...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCTGCTCACAGAGACTTaGAGTCAACTACAGACCGTG +
Preference number: 2 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSLLTET*SQLQTV
Trigger: CACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAG...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTAAGAATGGATTATTCCTaGTGTGTTTGGTTCAAGTCA +
Preference number: 2 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLRMDYS*CVWFKS
Trigger: TGACTTGAACCAAACACACCAGGAATAATCCATTCT...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GGGCCCTCTAAAGAGGGTCCTTGGAAAAGACTATCCCAGTCTTTTATCCTCTTGAAAACAACCTCGAGTTaGAAAGAGGCCCCAAAGAAT +
Preference number: 2 (lower is better)
Translates to: GPSKEGPWKRLSQSFILLKTTSS*KEAPKN
Trigger: ATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTT...CAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTAGCATTATAGGTAGCTaGGATGTAGTGGTTTTCAAT +
Preference number: 2 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPSIIGS*DVVVFN
Trigger: ATTGAAAACCACTACATCCCAGCTACCTATAATGCT...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACATGGTTAGTCAGAAATTaGTCATTGGCGGCAGTTTCC +
Preference number: 2 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTWLVRN*SLAAVS
Trigger: GGAAACTGCCGCCAATGACCAATTTCTGACTAACCA...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGAAGAGCCAAAAAGATaGGACGTGAATAGTCAGTTA +
Preference number: 2 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFEEPKR*DVNSQL
Trigger: TAACTGACTATTCACGTCCCATCTTTTTGGCTCTTC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
3UTR-3UTR CCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAGAAGAGCCAAAAAGATaGGACGTGAATAGTCAGTTA +
Preference number: 2 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKEEPKR*DVNSQL
Trigger: TAACTGACTATTCACGTCCCATCTTTTTGGCTCTTC...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
3UTR-3UTR CCA 90 bp CCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAAGGCTCCTTGCTCTGTTaGATTTGTAACTGCACAAAG +
Preference number: 2 (lower is better)
Translates to: PFFTISSTTPSDQPNLPQGSLLC*ICNCTK
Trigger: CTTTGTGCAGTTACAAATCCAACAGAGCAAGGAGCC...TTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR TCA 90 bp GTGCAAAAATCCCAACTCAACTTAGAAGAGCCTGTCTCCTTTCACATGACCACACTTTTTAACCAGGGATaGACCACGTTACAGAGGATG +
Preference number: 2 (lower is better)
Translates to: VQKSQLNLEEPVSFHMTTLFNQG*TTLQRM
Trigger: CATCCTCTGTAACGTGGTTCATCCCTGGTTAAAAAG...TGTGGTCATGTGAAAGGAGACAGGCTCTTCTAAGTTGAGTTGGGATTTTTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGACTCTGGAGAGATATATaGTTAAGTATGTCAAGGGAT +
Preference number: 2 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGLWRDI*LSMSRD
Trigger: ATCCCTTGACATACTTAATCATATATCTCTCCAGAG...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGATGCAATGGCTTTATATaGCGATATCAACAACCATGT +
Preference number: 2 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGCNGFI*RYQQPC
Trigger: ACATGGTTGTTGATATCGTCATATAAAGCCATTGCA...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCAATGGACAGGACAAGTaGAACTTGCTGGGTTTGCAC +
Preference number: 2 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSNGQDK*NLLGLH
Trigger: GTGCAAACCCAGCAAGTTTCACTTGTCCTGTCCATT...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCACCACAACTGTTTCCTaGATCCCATGCAGTAGATTT +
Preference number: 2 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFTTTVS*IPCSRF
Trigger: AAATCTACTGCATGGGATTCAGGAAACAGTTGTGGT...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp ACCATTGAGCACTTAATATTTGCAGAATACATGGCTAGATGCAGAGGATTCAAAGTCTGGTCTCAGTGCTaGCGTGGAGTTGAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: TIEHLIFAEYMARCRGFKVWSQC*RGVERS
Trigger: ACTCCTCTCAACTCCACGTCAGCACTGAGACCAGAC...TTTGAATCCTCTGCATCTAGCCATGTATTCTGCAAATATTAAGTGCTCAATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680767.1
3UTR-3UTR GCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCGCTGTGTTAGACCAGTaGTTATTAACAGGCTATCAG +
Preference number: 2 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFAVLDQ*LLTGYQ
Trigger: CTGATAGCCTGTTAATAAGCACTGGTCTAACACAGC...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 2 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR CCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAAAGCTGCTGGGTGTGGTaGTTCCTCTCTTCGGTGAGG +
Preference number: 2 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKSCWVW*FLSSVR
Trigger: CCTCACCGAAGAGAGGAACCACCACACCCAGCAGCT...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAAAGGAGCTGCTGGGTGTaGTGGTTCCTCTCTTCGGTG +
Preference number: 2 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKRSCWV*WFLSSV
Trigger: CACCGAAGAGAGGAACCACCACACCCAGCAGCTCCT...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATCTTATGGCACCTGTaGTTTATAAACAGCTTTAGT +
Preference number: 2 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSILWHL*FINSFS
Trigger: ACTAAAGCTGTTTATAAACCACAGGTGCCATAAGAT...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GGGCCCTCTAAAGAGGGTCCTTGGAAAAGACTATCCCAGTCTTTTATCCTCTTGAGAGGAACAAGACCATaGAAGAGCAGAGATAACTTT +
Preference number: 2 (lower is better)
Translates to: GPSKEGPWKRLSQSFILLRGTRP*KSRDNF
Trigger: AAAGTTATCTCTGCTCTTCCATGGTCTTGTTCCTCT...CAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCCAAGGCAAGTGATTTaGTTTCAAAGGGCAGCCAAG +
Preference number: 2 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSPRQVI*FQRAAK
Trigger: CTTGGCTGCCCTTTGAAACCAAATCACTTGCCTTGG...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGAGAGAAAAGGTGGCTaGTTAGTCAGAAATTGGTCA +
Preference number: 2 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTERKGG*LVRNWS
Trigger: TGACCAATTTCTGACTAACCAGCCACCTTTTCTCTC...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGTGAATAGTCAGTTATaGAGTACAGTCTTTCTCTCA +
Preference number: 2 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFVNSQL*STVFLS
Trigger: TGAGAGAAAGACTGTACTCCATAACTGACTATTCAC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
3UTR CAA 90 bp CGAGAGGAACAAGACCATGGAAGAGCAGAGATAACTTTAGTCCGTTaGGGGATCTTATGGCACCTGTGGTTTATAAACAGCTTTAGTAAC +
Preference number: 2 (lower is better)
Translates to: REEQDHGRAEITLVR*GILWHLWFINSFSN
Trigger: GTTACTAAAGCTGTTTATAAACCACAGGTGCCATAAGATCCCCAAACGGACTAAAGTTATCTCTGCTCTTCCATGGTCTTGTTCCTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp GGGCCCTCTAAAGAGGGTCCTTGGAAAAGACTATCCCAGTCTTTTATCCTCTTGTATGCACTACAAATCTaGGAACAAAAAGTTAGCTGC +
Preference number: 2 (lower is better)
Translates to: GPSKEGPWKRLSQSFILLYALQI*EQKVSC
Trigger: GCAGCTAACTTTTTGTTCTCAGATTTGTAGTGCATA...CAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp GGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACACTTTTTAACCAGGGATaGACCACGTTACAGAGGATG +
Preference number: 2 (lower is better)
Translates to: GNAATKGCWIYKIYLRLTLFNQG*TTLQRM
Trigger: CATCCTCTGTAACGTGGTTCATCCCTGGTTAAAAAG...TGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp AGGCAAGAGAAGGTGAGCTATTTTGCCTCGGTGGCTCAATATTCCATCAATGGGCTCTGGAGAGATATATaGTTAAGTATGTCAAGGGAT +
Preference number: 2 (lower is better)
Translates to: RQEKVSYFASVAQYSINGLWRDI*LSMSRD
Trigger: ATCCCTTGACATACTTAATCATATATCTCTCCAGAG...CCCATTGATGGAATATTGAGCCACCGAGGCAAAATAGCTCACCTTCTCTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
3UTR-3UTR TCA 90 bp AGAGTCCTTGCAATGGCTTTATATGACGATATCAACAACCATGTGATGGAGTTGCTGTGCAAAGAAATCTaGGAACTGTGCAGTTGTGCC +
Preference number: 2 (lower is better)
Translates to: RVLAMALYDDINNHVMELLCKEI*ELCSCA
Trigger: GGCACAACTGCACAGTTCTCAGATTTCTTTGCACAG...CAACTCCATCACATGGTTGTTGATATCGTCATATAAAGCCATTGCAAGGACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGTTAGAGCAAAAGCAATaGGAAAACCGCAGGTCGGCA +
Preference number: 2 (lower is better)
Translates to: SDCGISLLREGSDQQLEKLEQKQ*ENRRSA
Trigger: TGCCGACCTGCGGTTTTCTCATTGCTTTTGCTCTAA...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
3UTR-3UTR TCA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCGTAGAGGTTAGCTTCTaGGTGCTGTGGGTTTTGGGA +
Preference number: 2 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFVEVSF*VLWVLG
Trigger: TCCCAAAACCCACAGCACTCAGAAGCTAACCTCTAC...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
3UTR-3UTR TCA 90 bp TATTTGGACAGCATTTGTTTATTTCCTTGCAGAACCGCCTCTATAGGGCTGGGATACAGACCATGGGAATaGAGGGTAAAAATGTGTCCA +
Preference number: 2 (lower is better)
Translates to: YLDSICLFPCRTASIGLGYRPWE*RVKMCP
Trigger: TGGACACATTTTTACCCTTCATTCCCATGGTCTGTA...TCCCAGCCCTATAGAGGCGGTTCTGCAAGGAAATAAACAAATGCTGTCCAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR-3UTR GCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAAGAAACAACATATaGCAGCTCGGTCCAGTCAGT +
Preference number: 2 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSQRNNI*QLGPVS
Trigger: ACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTG...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp ATTGAGCACTTAATATTTGCAGAATACATGGCTAGATGCAGAGGATTCAAAGAATCTGTCAGGAGCTGCTaGGTGTGGTGGTTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: IEHLIFAEYMARCRGFKESVRSC*VWWFLS
Trigger: AGAGAGGAACCACCACACCCAGCAGCTCCTGACAGA...TTCTTTGAATCCTCTGCATCTAGCCATGTATTCTGCAAATATTAAGTGCTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
3UTR-3UTR CCA 90 bp GTGCAAAAATCCCAACTCAACTTAGAAGAGCCTGTCTCCTTTCACATGACCACAAGAGGCCCCAAAGAATaGATTATTCCTGGTGTGTTT +
Preference number: 2 (lower is better)
Translates to: VQKSQLNLEEPVSFHMTTRGPKE*IIPGVF
Trigger: AAACACACCAGGAATAATCCATTCTTTGGGGCCTCT...TGTGGTCATGTGAAAGGAGACAGGCTCTTCTAAGTTGAGTTGGGATTTTTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp AGTTGTGCCACTTTGGTGTCAGCCTGTGCTCAGAGACATTTGTCAGGTGAGTTCATCTTATGGCACCTGTaGTTTATAAACAGCTTTAGT +
Preference number: 2 (lower is better)
Translates to: SCATLVSACAQRHLSGEFILWHL*FINSFS
Trigger: ACTAAAGCTGTTTATAAACCACAGGTGCCATAAGAT...GAACTCACCTGACAAATGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp AAGTGTTGCAGATGCTGCTTGTCCGGGGAACACACTTTGAGAACTATTGTTCTACGTTTGGGGATCTTATaGCACCTGTGGTTTATAAAC +
Preference number: 2 (lower is better)
Translates to: KCCRCCLSGEHTLRTIVLRLGIL*HLWFIN
Trigger: GTTTATAAACCACAGGTGCCATAAGATCCCCAAACG...TAGAACAATAGTTCTCAAAGTGTGTTCCCCGGACAAGCAGCATCTGCAACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCAAGAGAGAGAAAAGGTaGCTGGTTAGTCAGAAATTG +
Preference number: 2 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFKREKR*LVSQKL
Trigger: CAATTTCTGACTAACCAGCCACCTTTTCTCTCTCTT...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CAA 90 bp CTTGCAATGGCTTTATATGACGATATCAACAACCATGTGATGGAGTaGGTTGGCAATGAAATAGCTATGACAACGGGGAAGGTTATCAGC +
Preference number: 2 (lower is better)
Translates to: LAMALYDDINNHVME*VGNEIAMTTGKVIS
Trigger: GCTGATAACCTTCCCCGTTGTCATAGCTATTTCATTGCCAACCAACTCCATCACATGGTTGTTGATATCGTCATATAAAGCCATTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp AAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAACTGATTAGAGTATCTTaGAAGAAAACAACCTCGAGT +
Preference number: 2 (lower is better)
Translates to: KATCRTPGGQLRQSTFRKLIRVS*KKTTSS
Trigger: ACTCGAGGTTGTTTTCTTTCAAGATACTCTAATCAG...TTTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACACTGATTAGAGTATCTTaGAAGAAAACAACCTCGAGT +
Preference number: 2 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTLIRVS*KKTTSS
Trigger: ACTCGAGGTTGTTTTCTTTCAAGATACTCTAATCAG...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACACTTTCTTGCTTATTCTaGATAAGGCCTTTTCAGAGA +
Preference number: 2 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTLSCLF*IRPFQR
Trigger: TCTCTGAAAAGGCCTTATTCAGAATAAGCAAGAAAG...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCTTTCTTGCTTATTCTaGATAAGGCCTTTTCAGAGA +
Preference number: 2 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFLSCLF*IRPFQR
Trigger: TCTCTGAAAAGGCCTTATTCAGAATAAGCAAGAAAG...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACACTCTGGAGAGATATATaGTTAAGTATGTCAAGGGAT +
Preference number: 2 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTLWRDI*LSMSRD
Trigger: ATCCCTTGACATACTTAATCATATATCTCTCCAGAG...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGATTAGAGCAAAAGCAATaGGAAAACCGCAGGTCGGCA +
Preference number: 2 (lower is better)
Translates to: CGISLLREGSDQQLEKLRLEQKQ*ENRRSA
Trigger: TGCCGACCTGCGGTTTTCTCATTGCTTTTGCTCTAA...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
3UTR-3UTR GCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACCAGCCTGTGTTTGTTTaGTTTTTAACCAGGGATGAA +
Preference number: 2 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNQPVFV*FLTRDE
Trigger: TTCATCCCTGGTTAAAAAGCAAACAAACACAGGCTG...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCAGAGGCCCCAAAGAATaGATTATTCCTGGTGTGTTT +
Preference number: 2 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSRGPKE*IIPGVF
Trigger: AAACACACCAGGAATAATCCATTCTTTGGGGCCTCT...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CAA 90 bp AATTTGTCCATGATCTTCCCTCCACACAATGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATTTTACCATGGCCTTCCGGATCAAAC +
Preference number: 2 (lower is better)
Translates to: NLSMIFPPHNVAKAI*TANTEILPWPSGSN
Trigger: GTTTGATCCGGAAGGCCATGGTAAAATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCACATTGTGTGGAGGGAAGATCATGGACAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR TCA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATATGCACTACAAATCTaGGAACAAAAAGTTAGCTGC +
Preference number: 2 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLYALQI*EQKVSC
Trigger: GCAGCTAACTTTTTGTTCTCAGATTTGTAGTGCATA...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGCTTTCTTGCTTATTCTaGATAAGGCCTTTTCAGAGA +
Preference number: 2 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKLSCLF*IRPFQR
Trigger: TCTCTGAAAAGGCCTTATTCAGAATAAGCAAGAAAG...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp AGAGTCCTTGCAATGGCTTTATATGACGATATCAACAACCATGTGATGGAGTTGGAGACATTTGTCAGGTaGGTTCTCTGGAGAGATATA +
Preference number: 2 (lower is better)
Translates to: RVLAMALYDDINNHVMELETFVR*VLWRDI
Trigger: TATATCTCTCCAGAGAACTCACCTGACAAATGTCTC...CAACTCCATCACATGGTTGTTGATATCGTCATATAAAGCCATTGCAAGGACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAGCTTTTCACTGAGTaGAAAAATCCCAACTCAACT +
Preference number: 2 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSQLFTE*KNPNST
Trigger: AGTTGAGTTGGGATTTTTGCACTCAGTGAAAAGCTG...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CAA 90 bp AACCGCCTCTATAGGGCTGGGATTGATAAGGTTCTGCTTTTAATTTaGACTGAGGTCAGTATAAGAAACAGCCACATGAAATCTATGACT +
Preference number: 2 (lower is better)
Translates to: NRLYRAGIDKVLLLI*TEVSIRNSHMKSMT
Trigger: AGTCATAGATTTCATGTGGCTGTTTCTTATACTGACCTCAGTCAAAATTAAAAGCAGAACCTTATCAATCCCAGCCCTATAGAGGCGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR-3UTR TCA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTTTAGAGCAAAAGCAATaGGAAAACCGCAGGTCGGCA +
Preference number: 2 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFLEQKQ*ENRRSA
Trigger: TGCCGACCTGCGGTTTTCTCATTGCTTTTGCTCTAA...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
3UTR-3UTR GCA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTAGGTTAGCTTCTGAGTaGTGTGGGTTTTGGGATGAC +
Preference number: 2 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFRLASE*CGFWDD
Trigger: GTCATCCCAAAACCCACAGCACTCAGAAGCTAACCT...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
3UTR-3UTR CCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGATCTTATGGCACCTGTaGTTTATAAACAGCTTTAGT +
Preference number: 2 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKILWHL*FINSFS
Trigger: ACTAAAGCTGTTTATAAACCACAGGTGCCATAAGAT...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CCA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCCATTTTGGTGAGCCATaGGGAACAAGGCTCAATAAT +
Preference number: 2 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFHFGEP*GTRLNN
Trigger: ATTATTGAGCCTTGTTCCCCATGGCTCACCAAAATG...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
3UTR-3UTR TCA 90 bp AGAGTCCTTGCAATGGCTTTATATGACGATATCAACAACCATGTGATGGAGTTGATTCTTCAGGGTTATTaGATGATTGCAAGTGGTTGT +
Preference number: 2 (lower is better)
Translates to: RVLAMALYDDINNHVMELILQGY*MIASGC
Trigger: ACAACCACTTGCAATCATTCAATAACCCTGAAGAAT...CAACTCCATCACATGGTTGTTGATATCGTCATATAAAGCCATTGCAAGGACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR TCA 90 bp AAATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCTGATTAGAGTATCTTaGAAGAAAACAACCTCGAGT +
Preference number: 2 (lower is better)
Translates to: KSICAKKSENCAVVPLWCLIRVS*KKTTSS
Trigger: ACTCGAGGTTGTTTTCTTTCAAGATACTCTAATCAG...ACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR GCA 90 bp ATTGAGCACTTAATATTTGCAGAATACATGGCTAGATGCAGAGGATTCAAAGAATTTGGTTCAAGTCACTaGTCACAGAGACTTGGAGTC +
Preference number: 2 (lower is better)
Translates to: IEHLIFAEYMARCRGFKEFGSSH*SQRLGV
Trigger: GACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAA...TTCTTTGAATCCTCTGCATCTAGCCATGTATTCTGCAAATATTAAGTGCTCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
3UTR-3UTR TCA 90 bp ATTGAGCACTTAATATTTGCAGAATACATGGCTAGATGCAGAGGATTCAAAGAAACTTCAGCTTTTCACTaGGTGCAAAAATCCCAACTC +
Preference number: 2 (lower is better)
Translates to: IEHLIFAEYMARCRGFKETSAFH*VQKSQL
Trigger: GAGTTGGGATTTTTGCACTCAGTGAAAAGCTGAAGT...TTCTTTGAATCCTCTGCATCTAGCCATGTATTCTGCAAATATTAAGTGCTCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
3UTR-3UTR CCA 90 bp ACCATTGAGCACTTAATATTTGCAGAATACATGGCTAGATGCAGAGGATTCAAAAGAGGAACAAGACCATaGAAGAGCAGAGATAACTTT +
Preference number: 2 (lower is better)
Translates to: TIEHLIFAEYMARCRGFKRGTRP*KSRDNF
Trigger: AAAGTTATCTCTGCTCTTCCATGGTCTTGTTCCTCT...TTTGAATCCTCTGCATCTAGCCATGTATTCTGCAAATATTAAGTGCTCAATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
3UTR-3UTR CCA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCGTGAATAGTCAGTTATaGAGTACAGTCTTTCTCTCA +
Preference number: 2 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFVNSQL*STVFLS
Trigger: TGAGAGAAAGACTGTACTCCATAACTGACTATTCAC...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
3UTR-3UTR TCA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTTTTCTCTCACAAAATTaGGCACATTTTGGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFFLSQN*AHFGEP
Trigger: TGGCTCACCAAAATGTGCTCAATTTTGTGAGAGAAA...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
3UTR-3UTR CCA 90 bp GTGTATTGGAAATACAATAGCAATACCCCATGTATGCATTCATGGGCAATTATAGAAGAGCCAAAAAGATaGGACGTGAATAGTCAGTTA +
Preference number: 2 (lower is better)
Translates to: VYWKYNSNTPCMHSWAIIEEPKR*DVNSQL
Trigger: TAACTGACTATTCACGTCCCATCTTTTTGGCTCTTC...TATAATTGCCCATGAATGCATACATGGGGTATTGCTATTGTATTTCCAATACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR-3UTR TCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAATATGCACTACAAATCTaGGAACAAAAAGTTAGCTGC +
Preference number: 2 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKYALQI*EQKVSC
Trigger: GCAGCTAACTTTTTGTTCTCAGATTTGTAGTGCATA...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp GCGGCGTGTGCGTCGGGGTGGAGCAGGCTGACGCTGACCGGATGGGCATGGGAAACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 3 (lower is better)
Translates to: AACASGWSRLTLTGWAWETLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...TTCCCATGCCCATCCGGTCAGCGTCAGCCTGCTCCACCCCGACGCACACGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR TCA 72 bp TGGGTACCGACACCGCAGTACCCGCTGTTGGCCCCCTaGGATGCAGAAGCTGCTGAGGGGCTTGGTGGAGAG +
Preference number: 3 (lower is better)
Translates to: WVPTPQYPLLAP*DAEAAEGLGGE
Trigger: CTCTCCACCAAGCCCCTCAGCAGCTTCTGCATCTCAGGGGGCCAACAGCGGGTACTGCGGTGTCGGTACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR GCA 72 bp GAAGGTGAGGGGGCAGTGGCGCCACCTTGGGGGCACTaGCACAGTTTGGCTCTGTGCATCCATCTGTTTACG +
Preference number: 3 (lower is better)
Translates to: EGEGAVAPPWGH*HSLALCIHLFT
Trigger: CGTAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTGGCGCCACTGCCCCCTCACCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR TCA 72 bp TGCCACTACCCAGACGATGTATTGCTGACATCTGGGTaGCGTGGGCCCTGGTCCTTGGGTACCGACACCGCA +
Preference number: 3 (lower is better)
Translates to: CHYPDDVLLTSG*RGPWSLGTDTA
Trigger: TGCGGTGTCGGTACCCAAGGACCAGGGCCCACGTCACCCAGATGTCAGCAATACATCGTCTGGGTAGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR CCA 72 bp GGGCAGTGGCGCCACCTTGGGGGCACTGCCACAGTTTaGCTCTGTGCATCCATCTGTTTACGAACTTCCTGG +
Preference number: 3 (lower is better)
Translates to: GQWRHLGGTATV*LCASICLRTSW
Trigger: CCAGGAAGTTCGTAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTGGCGCCACTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR CCA 72 bp CTACCCAGACGATGTATTGCTGACATCTGGGTGACGTaGGCCCTGGTCCTTGGGTACCGACACCGCAGTACC +
Preference number: 3 (lower is better)
Translates to: LPRRCIADIWVT*ALVLGYRHRST
Trigger: GGTACTGCGGTGTCGGTACCCAAGGACCAGGGCCCACGTCACCCAGATGTCAGCAATACATCGTCTGGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR-3UTR CAA 90 bp TGGCGCCACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTATCCCCCTGCTGGCTCTaGAGCCTGACCACAGGTTCA +
Preference number: 3 (lower is better)
Translates to: WRHLGGTATVWLCASICLSPCWL*SLTTGS
Trigger: TGAACCTGTGGTCAGGCTCAAGAGCCAGCAGGGGGA...TAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTGGCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR TCA 72 bp GTGAACATCGTACAGCCGCCCTCTGCAGAGGGGGCATaGAGATGTCAGGACTTGGCTGGGCACCTACCAACT +
Preference number: 3 (lower is better)
Translates to: VNIVQPPSAEGA*RCQDLAGHLPT
Trigger: AGTTGGTAGGTGCCCAGCCAAGTCCTGACATCTTCATGCCCCCTCTGCAGAGGGCGGCTGTACGATGTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR TCA 72 bp GGGGAGAGCCTGCCCCCTGAGTCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCATTAGCTCTCTCCGGC +
Preference number: 3 (lower is better)
Translates to: GESLPPESLVAS*DPPTGPLALSG
Trigger: GCCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGACTCAGGGGGCAGGCTCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR GCA 72 bp CACTGCTCACAGAGACTTGGAGTCAACTACAGACCGTaGAGGCCAAGGACCCTTCTTGGCTTCCGGGCTCTG +
Preference number: 3 (lower is better)
Translates to: HCSQRLGVNYRP*RPRTLLGFRAL
Trigger: CAGAGCCCGGAAGCCAAGAAGGGTCCTTGGCCTGCACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CCA 72 bp ACTCTGCCACTACCCAGACGATGTATTGCTGACATCTaGGTGACGTGGGCCCTGGTCCTTGGGTACCGACAC +
Preference number: 3 (lower is better)
Translates to: TLPLPRRCIADI*VTWALVLGYRH
Trigger: GTGTCGGTACCCAAGGACCAGGGCCCACGTCACCCAGATGTCAGCAATACATCGTCTGGGTAGTGGCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR GCA 72 bp CAAACGCAGACATGTGAACATCGTACAGCCGCCCTCTaGAGAGGGGGCATGAAGATGTCAGGACTTGGCTGG +
Preference number: 3 (lower is better)
Translates to: QTQTCEHRTAAL*RGGMKMSGLGW
Trigger: CCAGCCAAGTCCTGACATCTTCATGCCCCCTCTGCAGAGGGCGGCTGTACGATGTTCACATGTCTGCGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCTGTCTGACTATAGCTaGCTTGAGAGGAGTGTGATA +
Preference number: 3 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSLSDYS*LERSVI
Trigger: TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000269192.11
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCCGCTGTGGAGGAGGGTaGGCTGTGTTAGACCAGTGC +
Preference number: 3 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSRCGGG*AVLDQC
Trigger: GCACTGGTCTAACACAGCCAACCCTCCTCCACAGCG...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR CCA 72 bp GTCAGGACTTGGCTGGGCACCTACCAACTACGAACTTaGTGTGTGGGTTCAGAGAAGGTTTTTGCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: VRTWLGTYQLRT*CVGSEKVFASP
Trigger: GGGGCTGGCAAAAACCTTCTCTGAACCCACACACCAAGTTCGTAGTTGGTAGGTGCCCAGCCAAGTCCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CCA 72 bp GATGTGAGCCAAGTTGAGTGGCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGC +
Preference number: 3 (lower is better)
Translates to: DVSQVEWLLRLI*EHGVQRFTAGS
Trigger: GCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
3UTR CCA 72 bp TACAGGTCTGGGAGGCACGATGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGGGAACATGGGGTGCAA +
Preference number: 3 (lower is better)
Translates to: YRSGRHDVSQVE*LLRLIWEHGVQ
Trigger: TTGCACCCCATGTTCCCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAGACCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
3UTR-3UTR CAA 90 bp GCCTCTAAGCGGGACACGTTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCAGATGCGATCCAGATCTaGAGCCCTAGGCTCCTTGCT +
Preference number: 3 (lower is better)
Translates to: ASKRDTLSSVFGSRLFRADAIQI*SPRLLA
Trigger: AGCAAGGAGCCTAGGGCTCAAGATCTGGATCGCATC...TGCTCTGAACAACCTGGACCCAAACACTGAACTCAACGTGTCCCGCTTAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
3UTR-3UTR CAA 90 bp CAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGATGTGAGCCAAGTTTCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 3 (lower is better)
Translates to: QGVVHAGYRSGRHDVSQVSKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...AACTTGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR TCA 72 bp TTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTaGCGTGGAGCTAAGAGAGAGAAAAGGTGGCTGGTT +
Preference number: 3 (lower is better)
Translates to: LQDRGARVWSQC*RGAKREKRWLV
Trigger: AACCAGCCACCTTTTCTCTCTCTTAGCTCCACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CCA 72 bp ACGAAGAGGACTCTGCTGCCAGCCTTGCCGCATACCTaGCAATTAGCCTGTGTTCTTCATCAAGCCGGTTTG +
Preference number: 3 (lower is better)
Translates to: TKRTLLPALPHT*QLACVLHQAGL
Trigger: CAAACCGGCTTGATGAAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR CAA 90 bp GCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCAGGATTTAAGTTCTGAGAAGGAGAGCAAACGTTaGCAAGCGCACTTTAAGCCT +
Preference number: 3 (lower is better)
Translates to: ASSVQSVVECHVQDLSSEKESKR*QAHFKP
Trigger: AGGCTTAAAGTGCGCTTGCAAACGTTTGCTCTCCTT...CTCAGAACTTAAATCCTGCACGTGGCACTCCACCACTGACTGGACCGAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp TACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGGAGCTAAGAGAGCTACCAACTACGAACTaGGTGTGTGGGTTCAGAGAA +
Preference number: 3 (lower is better)
Translates to: YRTGVLESGLSADVELRELPTTN*VCGFRE
Trigger: TTCTCTGAACCCACACACCAAGTTCGTAGTTGGTAG...CTCTCTTAGCTCCACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp TATTTGGACAGCATTTGTTTATTTCCTTGCAGAACCGCCTCTATAGGGCTGGGACGTGGGCCCTGGTCCTaGGGTACCGACACCGCAGTA +
Preference number: 3 (lower is better)
Translates to: YLDSICLFPCRTASIGLGRGPWS*GTDTAV
Trigger: TACTGCGGTGTCGGTACCCAAGGACCAGGGCCCACG...TCCCAGCCCTATAGAGGCGGTTCTGCAAGGAAATAAACAAATGCTGTCCAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR TCA 72 bp AGGGAAATGGCTAAAGCAAGGCTGATGACGACAGGATaGTTGCCCTCTCTCTCTGCTAGGAGGAGGGAGGTT +
Preference number: 3 (lower is better)
Translates to: REMAKARLMTTG*LPSLSARRREV
Trigger: AACCTCCCTCCTCCTAGCAGAGAGAGAGGGCAATCATCCTGTCGTCATCAGCCTTGCTTTAGCCATTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR TCA 72 bp ATGTCGCCACGCATGGTACTTGTGGTAGCTCCACTGTaGATGTACCCAGGTTTTCGGGCATGGATTTGCGCT +
Preference number: 3 (lower is better)
Translates to: MSPRMVLVVAPL*MYPGFRAWICA
Trigger: AGCGCAAATCCATGCCCGAAAACCTGGGTACATTCACAGTGGAGCTACCACAAGTACCATGCGTGGCGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR GCA 72 bp ACGAACTTCCTGGTCCATAGGAGCCTTTCAAGATCCTaGTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAG +
Preference number: 3 (lower is better)
Translates to: TNFLVHRSLSRS*CLGNGLESIPK
Trigger: CTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGCAGGATCTTGAAAGGCTCCTATGGACCAGGAAGTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR GCA 72 bp ACCGGATGGAAGACATTTTCCACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACCAGACACTGCGGGGGA +
Preference number: 3 (lower is better)
Translates to: TGWKTFSTFASR*RRGNQTRHCGG
Trigger: TCCCCCGCAGTGTCTGGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCTTCCATCCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR CAA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCATGCAGTTGTGCCACTTaGGTGTCAGCCTGTGCTCAG +
Preference number: 3 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPCSCAT*VSACAQ
Trigger: CTGAGCACAGGCTGACACCAAAGTGGCACAACTGCA...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp CACGTTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCGATGCGATCCAGATCTaGAGCCCTAGGCTCCTTGCT +
Preference number: 3 (lower is better)
Translates to: HVEFSVWVQVVQSIFPQCDAIQI*SPRLLA
Trigger: AGCAAGGAGCCTAGGGCTCAAGATCTGGATCGCATC...GCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACTGAACTCAACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
3UTR-3UTR CAA 90 bp ACAAAGAAACAACATATGCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCTTCCGGGCTCTGAGTTaGTACACTCAGGAACCAAAT +
Preference number: 3 (lower is better)
Translates to: TKKQHMPARSSQWWSATCFRALS*YTQEPN
Trigger: ATTTGGTTCCTGAGTGTACAAACTCAGAGCCCGGAA...GCACGTGGCACTCCACCACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTACTGCTCACAGAGACTaGGAGTCAACTACAGACCGT +
Preference number: 3 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVTAHRD*ESTTDR
Trigger: ACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAGT...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTACTTCATCAAGCCGGTTaGAACTCTCAAGCATGCGTG +
Preference number: 3 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLLHQAG*NSQACV
Trigger: CACGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR GCA 72 bp CTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTaGGTGGAATCGAACCAAGGGGAATGCAGCAACCAA +
Preference number: 3 (lower is better)
Translates to: LLRTVEFSLVAP*VESNQGECSNQ
Trigger: TTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR GCA 72 bp CATGCATCCCCCAAGGCAAGAGAAGGTGAGCTATTTTaGCTCGGTGGCTCAATATTCCATCAATGGGTCCTG +
Preference number: 3 (lower is better)
Translates to: HASPKAREGELF*LGGSIFHQWVL
Trigger: CAGGACCCATTGATGGAATATTGAGCCACCGAGGCAAAATAGCTCACCTTCTCTTGCCTTGGGGGATGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000680767.1
3UTR CCA 72 bp TTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTaGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATT +
Preference number: 3 (lower is better)
Translates to: FTFLPSSINMAL*RRVGCVRPVLI
Trigger: AATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR CCA 72 bp GTTTGGCTCTGTGCATCCATCTGTTTACGAACTTCCTaGTCCATAGGAGCCTTTCAAGATCCTGCTGCCTGG +
Preference number: 3 (lower is better)
Translates to: VWLCASICLRTS*SIGAFQDPAAW
Trigger: CCAGGCAGCAGGATCTTGAAAGGCTCCTATGGACCAGGAAGTTCGTAAACAGATGGATGCACAGAGCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR-3UTR CAA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCTTCCGGGCTCTGAGTTaGTACACTCAGGAACCAAAT +
Preference number: 3 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSFRALS*YTQEPN
Trigger: ATTTGGTTCCTGAGTGTACAAACTCAGAGCCCGGAA...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp TATTTGGACAGCATTTGTTTATTTCCTTGCAGAACCGCCTCTATAGGGCTGGGAGGGCACTGCCACAGTTaGGCTCTGTGCATCCATCTG +
Preference number: 3 (lower is better)
Translates to: YLDSICLFPCRTASIGLGGHCHS*ALCIHL
Trigger: CAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCC...TCCCAGCCCTATAGAGGCGGTTCTGCAAGGAAATAAACAAATGCTGTCCAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR TCA 72 bp TCAACCTTTAGCGAGCATCAGAATCACCTAGAGGGTTaGCTAAAACAGACTTCTGGACCCAACCCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: STFSEHQNHLEG*LKQTSGPNPQS
Trigger: GCTCTGGGGGTTGGGTCCAGAAGTCTGTTTTAGTCAACCCTCTAGGTGATTCTGATGCTCGCTAAAGGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR TCA 72 bp GAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTaGCCAACCAAACTTACCCCAACTTCCGTCCTGACC +
Preference number: 3 (lower is better)
Translates to: EPIFHNLQHNSL*PTKLTPTSVLT
Trigger: GGTCAGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR TCA 72 bp CAATCAGCTGCCTTTGCTGCTTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCACTTCTCTGCTGAGGTG +
Preference number: 3 (lower is better)
Translates to: QSAAFAAYSHRW*KRCQEHFSAEV
Trigger: CACCTCAGCAGAGAAGTGCTCCTGACATCTCTTTCACCATCGATGCGAATAAGCAGCAAAGGCAGCTGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR GCA 72 bp ACAACATATGCCAGCTCGGTCCAGTCAGTGGTGGAGTaGCACGTGCAGGATTTAAGTTCTGAGTTCAAGAAC +
Preference number: 3 (lower is better)
Translates to: TTYASSVQSVVE*HVQDLSSEFKN
Trigger: GTTCTTGAACTCAGAACTTAAATCCTGCACGTGGCACTCCACCACTGACTGGACCGAGCTGGCATATGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp ATGAGGCACCAGTGGCCACCTGCTCCATCTAGAGAGGTATGGGTTCACAGAGGATCTTTGATAGCTCTTTaGCACTTCAGCTTTTCACTG +
Preference number: 3 (lower is better)
Translates to: MRHQWPPAPSREVWVHRGSLIAL*HFSFSL
Trigger: CAGTGAAAAGCTGAAGTGCAAAAGAGCTATCAAAGA...TCCTCTGTGAACCCATACCTCTCTAGATGGAGCAGGTGGCCACTGGTGCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp ATGAGGCACCAGTGGCCACCTGCTCCATCTAGAGAGGTATGGGTTCACAGAGGAATCACAGAACCTTTCTaGCTTATTCTGAATAAGGCC +
Preference number: 3 (lower is better)
Translates to: MRHQWPPAPSREVWVHRGITEPF*LILNKA
Trigger: GGCCTTATTCAGAATAAGCAAGAAAGGTTCTGTGAT...TCCTCTGTGAACCCATACCTCTCTAGATGGAGCAGGTGGCCACTGGTGCCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACTGCAGTTGTGCCACTTaGGTGTCAGCCTGTGCTCAG +
Preference number: 3 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNCSCAT*VSACAQ
Trigger: CTGAGCACAGGCTGACACCAAAGTGGCACAACTGCA...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp GCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGCAAGGAGTGAGTGGGATATATaGTCATACATAGCGTGGTAC +
Preference number: 3 (lower is better)
Translates to: AAWEMAWKVSPREMAKARSEWDI*SYIAWY
Trigger: GTACCACGCTATGTATGACAATATATCCCACTCACT...CCTTGCTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR-3UTR CAA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 3 (lower is better)
Translates to: LFPESHAVDFTFLPSSINVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR-3UTR CAA 90 bp ATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCCTGCTCCACATGGATTaGGTGAGTGGTTGGCATCCG +
Preference number: 3 (lower is better)
Translates to: IEPRGMQQPKVAGFTRSILLHMD*VSGWHP
Trigger: CGGATGCCAACCACTCACCAAATCCATGTGGAGCAG...GATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR GCA 72 bp TTCATAGTTTTCATCTTCAGGCTGCACATAGGGATCTaGATCCTCCGTAACCATGTCGCCACGCATGGTACT +
Preference number: 3 (lower is better)
Translates to: FIVFIFRLHIGI*ILRNHVATHGT
Trigger: AGTACCATGCGTGGCGACATGGTTACGGAGGATGCAGATCCCTATGTGCAGCCTGAAGATGAAAACTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR CCA 72 bp CCAACCCCCAGAGCTTCTGATTCAGTAGGCCTGAGGTaGGGCTTACAAATTAGTATTTCGAAGACCTTCCTA +
Preference number: 3 (lower is better)
Translates to: PTPRASDSVGLR*GLQISISKTFL
Trigger: TAGGAAGGTCTTCGAAATACTAATTTGTAAGCCCCACCTCAGGCCTACTGAATCAGAAGCTCTGGGGGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CCA 72 bp GCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTaGTGTCAGCCTGTGCTCAGAGACATTTGTCAGGTG +
Preference number: 3 (lower is better)
Translates to: AKKSENCAVVPL*CQPVLRDICQV
Trigger: CACCTGACAAATGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp AATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTGTCTGACTATAGCTaGCTTGAGAGGAGTGTGATA +
Preference number: 3 (lower is better)
Translates to: NMALWRRVGCVRPVLINRLSDYS*LERSVI
Trigger: TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAG...CCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp CTTGCTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGCTGTCTGACTATAGCTaGCTTGAGAGGAGTGTGATA +
Preference number: 3 (lower is better)
Translates to: LAGFALRTGPKSKSGEPRLSDYS*LERSVI
Trigger: TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAG...CCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp GGGCCCTCTAAAGAGGGTCCTTGGAAAAGACTATCCCAGTCTTTTATCCTCTTGTTCCGGGCTCTGAGTTaGTACACTCAGGAACCAAAT +
Preference number: 3 (lower is better)
Translates to: GPSKEGPWKRLSQSFILLFRALS*YTQEPN
Trigger: ATTTGGTTCCTGAGTGTACAAACTCAGAGCCCGGAA...CAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCATTATTCCTGGTGTGTTaGGTTCAAGTCACTGCTCAC +
Preference number: 3 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPLFLVC*VQVTAH
Trigger: GTGAGCAGTGACTTGAACCAAACACACCAGGAATAA...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp AAGTGTTGCAGATGCTGCTTGTCCGGGGAACACACTTTGAGAACTATTGTTCTAACTGCTCACAGAGACTaGGAGTCAACTACAGACCGT +
Preference number: 3 (lower is better)
Translates to: KCCRCCLSGEHTLRTIVLTAHRD*ESTTDR
Trigger: ACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAGT...TAGAACAATAGTTCTCAAAGTGTGTTCCCCGGACAAGCAGCATCTGCAACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAGGCCTCCAAACAACTaGATGGGGGAACTTGTGAAC +
Preference number: 3 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKRPPNN*MGELVN
Trigger: GTTCACAAGTTCCCCCATCAAGTTGTTTGGAGGCCT...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp AAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAAAAGGAGAGCAAACGTTaGCAAGCGCACTTTAAGCCT +
Preference number: 3 (lower is better)
Translates to: KATCRTPGGQLRQSTFRKKESKR*QAHFKP
Trigger: AGGCTTAAAGTGCGCTTGCAAACGTTTGCTCTCCTT...TTTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGTTCAGAGAAGGTTTTaGCCAGCCCCAGAAGCAAAA +
Preference number: 3 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTVQRRF*PAPEAK
Trigger: TTTTGCTTCTGGGGCTGGCAAAAACCTTCTCTGAAC...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp AGAGTCCTTGCAATGGCTTTATATGACGATATCAACAACCATGTGATGGAGTTGTGCAGTTGTGCCACTTaGGTGTCAGCCTGTGCTCAG +
Preference number: 3 (lower is better)
Translates to: RVLAMALYDDINNHVMELCSCAT*VSACAQ
Trigger: CTGAGCACAGGCTGACACCAAAGTGGCACAACTGCA...CAACTCCATCACATGGTTGTTGATATCGTCATATAAAGCCATTGCAAGGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCTGGTTAGTCAGAAATaGGTCATTGGCGGCAGTTTC +
Preference number: 3 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFLVSQK*VIGGSF
Trigger: GAAACTGCCGCCAATGACCAATTTCTGACTAACCAG...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAATAACACACGCCATTTaGTCTCGCTTACAGGACAGG +
Preference number: 3 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTITHAI*SRLQDR
Trigger: CCTGTCCTGTAAGCGAGACAAAATGGCGTGTGTTAT...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAAAAGCTAAGACTGGTTaGAAACTTATACCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKKAKTG*KLIPLG
Trigger: CCCCAGAGGTATAAGTTTCAAACCAGTCTTAGCTTT...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
3UTR-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTAAAGCTAAGACTGGTTaGAAACTTATACCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFKAKTG*KLIPLG
Trigger: CCCCAGAGGTATAAGTTTCAAACCAGTCTTAGCTTT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
3UTR-3UTR CAA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAAAAATTGAGCACATTTaGGTGAGCCATGGGGAACAA +
Preference number: 3 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKKIEHI*VSHGEQ
Trigger: TTGTTCCCCATGGCTCACCAAAATGTGCTCAATTTT...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
3UTR-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTAAAATTGAGCACATTTaGGTGAGCCATGGGGAACAA +
Preference number: 3 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFKIEHI*VSHGEQ
Trigger: TTGTTCCCCATGGCTCACCAAAATGTGCTCAATTTT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
3UTR-3UTR CAA 90 bp ATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 3 (lower is better)
Translates to: IEPRGMQQPKVAGFTRSIAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...GATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR TCA 72 bp GTCAGTGGTGGAGTGCCACGTGCAGGATTTAAGTTCTaGGTTCAAGAACTACCTGGCTATGATTTTGAGCTG +
Preference number: 3 (lower is better)
Translates to: VSGGVPRAGFKF*VQELPGYDFEL
Trigger: CAGCTCAAAATCATAGCCAGGTAGTTCTTGAACTCAGAACTTAAATCCTGCACGTGGCACTCCACCACTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR TCA 72 bp GGCGGCAGTTTCCAGAGTCCTTGCAATGGCTTTATATaGCGATATCAACAACCATGTGATGGAGTTGGTTGG +
Preference number: 3 (lower is better)
Translates to: GGSFQSPCNGFI*RYQQPCDGVGW
Trigger: CCAACCAACTCCATCACATGGTTGTTGATATCGTCATATAAAGCCATTGCAAGGACTCTGGAAACTGCCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR GCA 72 bp GAATGGATTATTCCTGGTGTGTTTGGTTCAAGTCACTaGTCACAGAGACTTGGAGTCAACTACAGACCGTGC +
Preference number: 3 (lower is better)
Translates to: EWIIPGVFGSSH*SQRLGVNYRPC
Trigger: GCACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAACACACCAGGAATAATCCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATCTGTCTGACTATAGCTaGCTTGAGAGGAGTGTGATA +
Preference number: 3 (lower is better)
Translates to: LFPESHAVDFTFLPSSINLSDYS*LERSVI
Trigger: TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAG...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp GTGCAAAAATCCCAACTCAACTTAGAAGAGCCTGTCTCCTTTCACATGACCACATTCCGGGCTCTGAGTTaGTACACTCAGGAACCAAAT +
Preference number: 3 (lower is better)
Translates to: VQKSQLNLEEPVSFHMTTFRALS*YTQEPN
Trigger: ATTTGGTTCCTGAGTGTACAAACTCAGAGCCCGGAA...TGTGGTCATGTGAAAGGAGACAGGCTCTTCTAAGTTGAGTTGGGATTTTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAATAACTTTAGTCCGTTaGGGGATCTTATGGCACCTG +
Preference number: 3 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTITLVR*GILWHL
Trigger: CAGGTGCCATAAGATCCCCAAACGGACTAAAGTTAT...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAAGGAGAGCAAACGTTaGCAAGCGCACTTTAAGCCT +
Preference number: 3 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKKESKR*QAHFKP
Trigger: AGGCTTAAAGTGCGCTTGCAAACGTTTGCTCTCCTT...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp AGTTGTGCCACTTTGGTGTCAGCCTGTGCTCAGAGACATTTGTCAGGTGAGTTCTCTTTGATAGCTCTTTaGCACTTCAGCTTTTCACTG +
Preference number: 3 (lower is better)
Translates to: SCATLVSACAQRHLSGEFSLIAL*HFSFSL
Trigger: CAGTGAAAAGCTGAAGTGCAAAAGAGCTATCAAAGA...GAACTCACCTGACAAATGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCGAATCACCTAGAGGGTaGACTAAAACAGACTTCTGG +
Preference number: 3 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFESPRG*TKTDFW
Trigger: CCAGAAGTCTGTTTTAGTCAACCCTCTAGGTGATTC...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGTGTGCTCAGAGACATTaGTCAGGTGAGTTCTCTGGA +
Preference number: 3 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKCAQRH*SGEFSG
Trigger: TCCAGAGAACTCACCTGACAAATGTCTCTGAGCACA...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACATAACACACGCCATTTaGTCTCGCTTACAGGACAGG +
Preference number: 3 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNITHAI*SRLQDR
Trigger: CCTGTCCTGTAAGCGAGACAAAATGGCGTGTGTTAT...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR GCA 72 bp CAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTaGCACTTTGGTGTCAGCCTGTGCTCAGAGACATTT +
Preference number: 3 (lower is better)
Translates to: QSVQRNLRTVQL*HFGVSLCSETF
Trigger: AAATGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR GCA 72 bp TGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTaGTGGATTTACAAGATCTATCTACGGTTAACAGCC +
Preference number: 3 (lower is better)
Translates to: WNRTKGNAATKG*WIYKIYLRLTA
Trigger: GGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR GCA 72 bp TTTGCCTCGGTGGCTCAATATTCCATCAATGGGTCCTaGTTTAAACTGCAAGTACCTGCCTTCCTTCTTTCA +
Preference number: 3 (lower is better)
Translates to: FASVAQYSINGS*FKLQVPAFLLS
Trigger: TGAAAGAAGGAAGGCAGGTACTTGCAGTTTAAAGCAGGACCCATTGATGGAATATTGAGCCACCGAGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000680767.1
3UTR GCA 72 bp CAAATTGCATTTCTTCTGAACAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAGTCGGATGCGATCCAG +
Preference number: 3 (lower is better)
Translates to: QIAFLLNKPKLA*CSVGGESDAIQ
Trigger: CTGGATCGCATCCGACTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTTGTTCAGAAGAAATGCAATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
3UTR CCA 72 bp AAGAGGCCCCAAAGAATGGATTATTCCTGGTGTGTTTaGTTCAAGTCACTGCTCACAGAGACTTGGAGTCAA +
Preference number: 3 (lower is better)
Translates to: KRPQRMDYSWCV*FKSLLTETWSQ
Trigger: TTGACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAACACACCAGGAATAATCCATTCTTTGGGGCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CCA 72 bp GAAAACAACCTCGAGTTGGAAAGAGGCCCCAAAGAATaGATTATTCCTGGTGTGTTTGGTTCAAGTCACTGC +
Preference number: 3 (lower is better)
Translates to: ENNLELERGPKE*IIPGVFGSSHC
Trigger: GCAGTGACTTGAACCAAACACACCAGGAATAATCCATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCGAAAACAACCTCGAGTaGGAAAGAGGCCCCAAAGAA +
Preference number: 3 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVENNLE*ERGPKE
Trigger: TTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTC...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR TCA 72 bp CGATATCAACAACCATGTGATGGAGTTGGTTGGCAATaGAATAGCTATGACAACGGGGAAGGTTATCAGCAG +
Preference number: 3 (lower is better)
Translates to: RYQQPCDGVGWQ*NSYDNGEGYQQ
Trigger: CTGCTGATAACCTTCCCCGTTGTCATAGCTATTTCATTGCCAACCAACTCCATCACATGGTTGTTGATATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR TCA 72 bp CAAATGAAGGACCTTCAAAAACTGCCGTGGGTAGTTTaGGAACTTCCCGAAGGAATTGGTCATATCGTCCAT +
Preference number: 3 (lower is better)
Translates to: QMKDLQKLPWVV*ELPEGIGHIVH
Trigger: ATGGACGATATGACCAATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGTTTTTGAAGGTCCTTCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR GCA 72 bp TTCTTGTTTTCTAGCTCAGCAATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTGAAAGAGATGTCAGGA +
Preference number: 3 (lower is better)
Translates to: FLFSSSAISCLC*LFASMVKEMSG
Trigger: TCCTGACATCTCTTTCACCATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCTAGAAAACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR GCA 72 bp CTGTTCTTGTTTTCTAGCTCAGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATGGTGAAAGAGATGTCA +
Preference number: 3 (lower is better)
Translates to: LFLFSSSAISCL*CLFASMVKEMS
Trigger: TGACATCTCTTTCACCATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCTAGAAAACAAGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR CCA 72 bp AATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTaGATTTACAAGATCTATCTACGGTTAACAGCCAAG +
Preference number: 3 (lower is better)
Translates to: NRTKGNAATKGC*IYKIYLRLTAK
Trigger: CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAATCACAGAACCTTTCTaGCTTATTCTGAATAAGGCC +
Preference number: 3 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTITEPF*LILNKA
Trigger: GGCCTTATTCAGAATAAGCAAGAAAGGTTCTGTGAT...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp AGAGTCCTTGCAATGGCTTTATATGACGATATCAACAACCATGTGATGGAGTTGCTACCAACTACGAACTaGGTGTGTGGGTTCAGAGAA +
Preference number: 3 (lower is better)
Translates to: RVLAMALYDDINNHVMELLPTTN*VCGFRE
Trigger: TTCTCTGAACCCACACACCAAGTTCGTAGTTGGTAG...CAACTCCATCACATGGTTGTTGATATCGTCATATAAAGCCATTGCAAGGACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR TCA 72 bp GTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTaGTGGAGATGGATGTGCAATTCATTGTGGAACAAG +
Preference number: 3 (lower is better)
Translates to: VLDQCLLTGYQL*WRWMCNSLWNK
Trigger: CTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR GCA 72 bp AGAAGTCTATATTTGGACAGCATTTGTTTATTTCCTTaGAGAACCGCCTCTATAGGGCTGGGATTGATAAGG +
Preference number: 3 (lower is better)
Translates to: RSLYLDSICLFP*RTASIGLGLIR
Trigger: CCTTATCAATCCCAGCCCTATAGAGGCGGTTCTGCAAGGAAATAAACAAATGCTGTCCAAATATAGACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR CCA 72 bp AGAGCAGAGATAACTTTAGTCCGTTTGGGGATCTTATaGCACCTGTGGTTTATAAACAGCTTTAGTAACGAG +
Preference number: 3 (lower is better)
Translates to: RAEITLVRLGIL*HLWFINSFSNE
Trigger: CTCGTTACTAAAGCTGTTTATAAACCACAGGTGCCATAAGATCCCCAAACGGACTAAAGTTATCTCTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATCTGTCTGACTATAGCTaGCTTGAGAGGAGTGTGATA +
Preference number: 3 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDLSDYS*LERSVI
Trigger: TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAG...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp AAAGAAAACAACCTCGAGTTGGAAAGAGGCCCCAAAGAATGGATTATTCCTGGTAATTCTTCAGGGTTATaGAATGATTGCAAGTGGTTG +
Preference number: 3 (lower is better)
Translates to: KENNLELERGPKEWIIPGNSSGL*NDCKWL
Trigger: CAACCACTTGCAATCATTCAATAACCCTGAAGAATT...ACCAGGAATAATCCATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp ACCATTGAGCACTTAATATTTGCAGAATACATGGCTAGATGCAGAGGATTCAAATTATTCCTGGTGTGTTaGGTTCAAGTCACTGCTCAC +
Preference number: 3 (lower is better)
Translates to: TIEHLIFAEYMARCRGFKLFLVC*VQVTAH
Trigger: GTGAGCAGTGACTTGAACCAAACACACCAGGAATAA...TTTGAATCCTCTGCATCTAGCCATGTATTCTGCAAATATTAAGTGCTCAATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
3UTR-3UTR CAA 90 bp AAATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTTCCGGGGAACACACTTaGAGAACTATTGTTCTAAAA +
Preference number: 3 (lower is better)
Translates to: KSICAKKSENCAVVPLWCSGEHT*RTIVLK
Trigger: TTTTAGAACAATAGTTCTCAAAGTGTGTTCCCCGGA...ACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCTGGATGTGCAATTCATaGTGGAACAAGAAAGAAACA +
Preference number: 3 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSWMCNS*WNKKET
Trigger: TGTTTCTTTCTTGTTCCACAATGAATTGCACATCCA...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCAAAGCTAAGACTGGTTaGAAACTTATACCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFKAKTG*KLIPLG
Trigger: CCCCAGAGGTATAAGTTTCAAACCAGTCTTAGCTTT...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
3UTR-3UTR CAA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCAAAATTGAGCACATTTaGGTGAGCCATGGGGAACAA +
Preference number: 3 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFKIEHI*VSHGEQ
Trigger: TTGTTCCCCATGGCTCACCAAAATGTGCTCAATTTT...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
3UTR-3UTR CAA 90 bp AGAGTCCTTGCAATGGCTTTATATGACGATATCAACAACCATGTGATGGAGTTGAATTCTTCAGGGTTATaGAATGATTGCAAGTGGTTG +
Preference number: 3 (lower is better)
Translates to: RVLAMALYDDINNHVMELNSSGL*NDCKWL
Trigger: CAACCACTTGCAATCATTCAATAACCCTGAAGAATT...CAACTCCATCACATGGTTGTTGATATCGTCATATAAAGCCATTGCAAGGACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR-3UTR CAA 90 bp ATTGAGCACTTAATATTTGCAGAATACATGGCTAGATGCAGAGGATTCAAAGAAATAACTTTAGTCCGTTaGGGGATCTTATGGCACCTG +
Preference number: 3 (lower is better)
Translates to: IEHLIFAEYMARCRGFKEITLVR*GILWHL
Trigger: CAGGTGCCATAAGATCCCCAAACGGACTAAAGTTAT...TTCTTTGAATCCTCTGCATCTAGCCATGTATTCTGCAAATATTAAGTGCTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
3UTR-3UTR CAA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCGCGTGGTACATGCACTaGAAATTAAAGCTGCTTTTA +
Preference number: 3 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFAWYMH*KLKLLL
Trigger: TAAAAGCAGCTTTAATTTCAAGTGCATGTACCACGC...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
3UTR-3UTR CAA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCGAAATGAAAGATACGTaGAAATTGGACAGGTTGTGG +
Preference number: 3 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFEMKDT*KLDRLW
Trigger: CCACAACCTGTCCAATTTCAACGTATCTTTCATTTC...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
3UTR TCA 72 bp TTCCTTCTTGAAACACACACCTATGCACTACAAATCTaGGAACAAAAAGTTAGCTGCACTATAGTCATCAGG +
Preference number: 3 (lower is better)
Translates to: FLLETHTYALQI*EQKVSCTIVIR
Trigger: CCTGATGACTATAGTGCAGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
3UTR CCA 72 bp ATAATCATATTTTGGGTTAATGGGTACCATGCACCCTaGAGGAACCAGAACAGCTCAAAGTATTATAGGAAT +
Preference number: 3 (lower is better)
Translates to: IIIFWVNGYHAP*RNQNSSKYYRN
Trigger: ATTCCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
3UTR CCA 72 bp TGGAAATACAATAGCAATACCCCATGTATGCATTCATaGGCAATTATACAGGCTGTATGTGTTATGTGTCCT +
Preference number: 3 (lower is better)
Translates to: WKYNSNTPCMHS*AIIQAVCVMCP
Trigger: AGGACACATAACACATACAGCCTGTATAATTGCCCATGAATGCATACATGGGGTATTGCTATTGTATTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR CCA 72 bp ATAACTTTAGTCCGTTTGGGGATCTTATGGCACCTGTaGTTTATAAACAGCTTTAGTAACGAGTATTTCAAA +
Preference number: 3 (lower is better)
Translates to: ITLVRLGILWHL*FINSFSNEYFK
Trigger: TTTGAAATACTCGTTACTAAAGCTGTTTATAAACCACAGGTGCCATAAGATCCCCAAACGGACTAAAGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCCTGTGAGGGAGTCCTaGGGCGTGTGCGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSPVRES*GVCVGV
Trigger: CACCCCGACGCACACGCCGCAGGACTCCCTCACAGG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCGGCCTGCTGATGGTGTaGCTGGGGGAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSGLLMV*LGEERG
Trigger: TCCCCGCTCCTCCCCCAGCCACACCATCAGCAGGCC...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCGCGTGTGCGTCGGGGTaGAGCAGGCTGACGCTGACC +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSACASG*SRLTLT
Trigger: GGTCAGCGTCAGCCTGCTCCACCCCGACGCACACGC...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCTGGGAATTGGCCTGCTaGTGGTGTGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSWELAC*WCGWGR
Trigger: CCTCCCCCAGCCACACCATCAGCAGGCCAATTCCCA...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCGGCGTGTGCGTCGGGGTGGAGCAGGCTGACGCTGACCGGATGGGCATGGGAACTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: AACASGWSRLTLTGWAWELSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...TTCCCATGCCCATCCGGTCAGCGTCAGCCTGCTCCACCCCGACGCACACGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCGAGGAGCCGGAGTTCTaGCAGCAGGGTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSEEPEF*QQGGVL
Trigger: CAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTC...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCGGGTCTGTCAGGAGCTaGTGGGTGTGGTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSGSVRS*WVWWFL
Trigger: GAGGAACCACCACACCCAGCAGCTCCTGACAGACCC...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCTGACGCTGACCGGATaGGCATGGGAATTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSLTLTG*AWELAC
Trigger: GCAGGCCAATTCCCATGCCCATCCGGTCAGCGTCAG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCGGGAGGAAGGGGGACTaGATACTAGACCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSGRKGD*ILDLGW
Trigger: CCATCCCAGGTCTAGTATTCAGTCCCCCTTCCTCCC...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269192.11
ENST00000591182.5
CDS-3UTR TCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSLGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCGAAGAGGACTCTGCTaGCAGCCTTGCCGCATACCT +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSRRGLC*QPCRIP
Trigger: AGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGCCTGTGAGGGAGTCCTaGGGCGTGTGCGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: FCLAYRTGVLESGLSADVPVRES*GVCVGV
Trigger: CACCCCGACGCACACGCCGCAGGACTCCCTCACAGG...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCAGGCTGCTGCCAGGCTaGTGTCTTCCTCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSRLLPG*CLPPLC
Trigger: ACACAGAGGAGGAAGACAGCAGCCTGGCAGCAGCCT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGGCCTGCTGATGGTGTaGCTGGGGGAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLGLLMV*LGEERG
Trigger: TCCCCGCTCCTCCCCCAGCCACACCATCAGCAGGCC...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCGCGTGTGCGTCGGGGTaGAGCAGGCTGACGCTGACC +
Preference number: 4 (lower is better)
Translates to: DFTFLPSSINMALWRRVGACASG*SRLTLT
Trigger: GGTCAGCGTCAGCCTGCTCCACCCCGACGCACACGC...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGGCGTGTGCGTCGGGGTaGAGCAGGCTGACGCTGACC +
Preference number: 4 (lower is better)
Translates to: PSSINMALWRRVGCVRPVACASG*SRLTLT
Trigger: GGTCAGCGTCAGCCTGCTCCACCCCGACGCACACGC...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCAGCTGCTGGGTGTGGTaGTTCCTCTCTTCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSSCWVW*FLSSVR
Trigger: CCTCACCGAAGAGAGGAACCACCACACCCAGCAGCT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCAGGAGCTGCTGGGTGTaGTGGTTCCTCTCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSRSCWV*WFLSSV
Trigger: CACCGAAGAGAGGAACCACCACACCCAGCAGCTCCT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGGAGCTAAGAGAGTGGGAATTGGCCTGCTaGTGGTGTGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: YRTGVLESGLSADVELREWELAC*WCGWGR
Trigger: CCTCCCCCAGCCACACCATCAGCAGGCCAATTCCCA...CTCTCTTAGCTCCACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTCCCCCTACTCCTGTaGGGGAGTCCTGCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: PSSINMALWRRVGCVRPVLPLLL*GSPAAC
Trigger: ACACGCCGCAGGACTCCCTCACAGGAGTAGGGGGAG...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTGCTTAATGCATCCTGTGAGGGAGTCCTaGGGCGTGTGCGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: WGAKVHGWKHSSGTCLMHPVRES*GVCVGV
Trigger: CACCCCGACGCACACGCCGCAGGACTCCCTCACAGG...ATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR GCA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCCCTGTGAGGGAGTCCTaGGGCGTGTGCGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCPVRES*GVCVGV
Trigger: CACCCCGACGCACACGCCGCAGGACTCCCTCACAGG...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCGCAAAGGTTCACGGCTaGAAGCACAGCTCAGGGACT +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSAKVHG*KHSSGT
Trigger: AGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGC...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCTGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSCWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCTACTTCACTGTCCTTaGGAGGAGAGCGTGCACCGT +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSLLHCP*EESVHR
Trigger: ACGGTGCACGCTCTCCTCCCAAGGACAGTGAAGTAG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269192.11
CDS-3UTR CCA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGCCTGCTGATGGTGTaGCTGGGGGAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVAGLLMV*LGEERG
Trigger: TCCCCGCTCCTCCCCCAGCCACACCATCAGCAGGCC...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCGATGGGCATGGGAATTaGCCTGCTGATGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSDGHGN*PADGVA
Trigger: AGCCACACCATCAGCAGGCCAATTCCCATGCCCATC...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCGCGTGTGCGTCGGGGTaGAGCAGGCTGACGCTGACC +
Preference number: 4 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCACASG*SRLTLT
Trigger: GGTCAGCGTCAGCCTGCTCCACCCCGACGCACACGC...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCTCTGTCAGGAGCTGCTaGGTGTGGTGGTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSSVRSC*VWWFLS
Trigger: AGAGAGGAACCACCACACCCAGCAGCTCCTGACAGA...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGTGGGAATTGGCCTGCTaGTGGTGTGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PSSINMALWRRVGCVRPVWELAC*WCGWGR
Trigger: CCTCCCCCAGCCACACCATCAGCAGGCCAATTCCCA...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAACTCCCCCTACTCCTGTaGGGGAGTCCTGCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: RTVEFSLVAPCVESNQGELPLLL*GSPAAC
Trigger: ACACGCCGCAGGACTCCCTCACAGGAGTAGGGGGAG...TTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCGTGGTAGCTCCACTGTaGATGTACCCAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSVVAPL*MYPGFR
Trigger: CCGAAAACCTGGGTACATTCACAGTGGAGCTACCAC...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSTGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GCTTCTCAGGCTGATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACGAGGAGCCGGAGTTCTaGCAGCAGGGTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: ASQADLGTWGAKVHGWKHEEPEF*QQGGVL
Trigger: CAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTC...GTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR GCA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCCCTGTGAGGGAGTCCTaGGGCGTGTGCGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGIPVRES*GVCVGV
Trigger: CACCCCGACGCACACGCCGCAGGACTCCCTCACAGG...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGGCGCCACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTACCACCTTGGGGGCACTaGCACAGTTTGGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: WRHLGGTATVWLCASICLPPWGH*HSLALC
Trigger: GCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTGG...TAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTGGCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCTTCAGCCACAGGGCTaGATGCACTTATTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSLQPQG*MHLFPQ
Trigger: CTGAGGGAATAAGTGCATCCAGCCCTGTGGCTGAAG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269192.11
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCTCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSMRPSN*TISSLR
Trigger: CCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCAT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTGGCCTGCTGATGGTGTaGCTGGGGGAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPGLLMV*LGEERG
Trigger: TCCCCGCTCCTCCCCCAGCCACACCATCAGCAGGCC...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCGGCCTGCTGATGGTGTaGCTGGGGGAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSGLLMV*LGEERG
Trigger: TCCCCGCTCCTCCCCCAGCCACACCATCAGCAGGCC...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCGTGCAGGCCAAGGACCCTTCTTGGCTTCCGGGCTCTGAGTTTGTACACTCAGAGCTGCTGGGTGTGGTaGTTCCTCTCTTCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PCRPRTLLGFRALSLYTQSCWVW*FLSSVR
Trigger: CCTCACCGAAGAGAGGAACCACCACACCCAGCAGCT...CTGAGTGTACAAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGCCTGCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGCTCGGTCCAGTCAGTaGTGGAGTGCCACGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLARSSQ*WSATCR
Trigger: CCTGCACGTGGCACTCCACCACTGACTGGACCGAGC...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCTGGTTACAGGTCTGGGAGGCACGATGTGAGCCAAGTTGAGTGGCTTCTCAGGCTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: AGYRSGRHDVSQVEWLLRLGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...CCTGAGAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAGACCTGTAACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR TCA 90 bp AAGAGGACTCTGCTGCCAGCCTTGCCGCATACCTGGCAATTAGCCTGTGTTCTTTGGGAATTGGCCTGCTaGTGGTGTGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KRTLLPALPHTWQLACVLWELAC*WCGWGR
Trigger: CCTCCCCCAGCCACACCATCAGCAGGCCAATTCCCA...AAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR TCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCACTCCCCCTACTCCTGTaGGGGAGTCCTGCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSLPLLL*GSPAAC
Trigger: ACACGCCGCAGGACTCCCTCACAGGAGTAGGGGGAG...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGGGTGGGGTTTTGCTGTaGCTTCTCTGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FCLAYRTGVLESGLSADVGGVLL*LLWRGL
Trigger: CAGCCCACGCCAGAGAAGGCACAGCAAAACCCCACC...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGGAGGAGCCGGAGTTCTaGCAGCAGGGTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PSSINMALWRRVGCVRPVEEPEF*QQGGVL
Trigger: CAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTC...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCGAGGAGCCGGAGTTCTaGCAGCAGGGTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: DFTFLPSSINMALWRRVGEEPEF*QQGGVL
Trigger: CAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTC...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCCCTGTGAGGGAGTCCTaGGGCGTGTGCGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: CGGGLAVLDQCLLTGYQLPVRES*GVCVGV
Trigger: CACCCCGACGCACACGCCGCAGGACTCCCTCACAGG...GAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCCTGTGAGGGAGTCCTaGGGCGTGTGCGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: PLTNQTYPNFRPDQPQLFPVRES*GVCVGV
Trigger: CACCCCGACGCACACGCCGCAGGACTCCCTCACAGG...AAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCTGCACATAGGGATCTaGATCCTCCGTAACCATGTC +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSLHIGI*ILRNHV
Trigger: GACATGGTTACGGAGGATGCAGATCCCTATGTGCAG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCCGTACAGCCGCCCTCTaGAGAGGGGGCATGAAGATG +
Preference number: 4 (lower is better)
Translates to: DFTFLPSSINMALWRRVGRTAAL*RGGMKM
Trigger: CATCTTCATGCCCCCTCTGCAGAGGGCGGCTGTACG...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATCCGGGCCGGACATCCTaGAGCAGCCGCTACCGCCGC +
Preference number: 4 (lower is better)
Translates to: LFPESHAVDFTFLPSSINPGRTS*SSRYRR
Trigger: GCGGCGGTAGCGGCTGCTGCAGGATGTCCGGCCCGG...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CCA 90 bp GCTGATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: ADLGTWGAKVHGWKHSSGADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...CCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCGCCTTGCCGCATACCTaGCAATTAGCCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSALPHT*QLACVL
Trigger: AAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGC...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACGCCATTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTCTGACGCTGACCGGATaGGCATGGGAATTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TPFCLAYRTGVLESGLSALTLTG*AWELAC
Trigger: GCAGGCCAATTCCCATGCCCATCCGGTCAGCGTCAG...AGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAATGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGTTGTGCCACTTTGGTGTCAGCCTGTGCTCAGAGACATTTGTCAGGTGAGTTCGCGTGTGCGTCGGGGTaGAGCAGGCTGACGCTGACC +
Preference number: 4 (lower is better)
Translates to: SCATLVSACAQRHLSGEFACASG*SRLTLT
Trigger: GGTCAGCGTCAGCCTGCTCCACCCCGACGCACACGC...GAACTCACCTGACAAATGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCCAGGTTTTCGGGCATaGATTTGCGCTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSPGFRA*ICARKA
Trigger: GGCTTTTCTAGCGCAAATCCATGCCCGAAAACCTGG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCAGGTATTCCTCCATCTaGAGCTCATTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSRYSSI*SSFSSC
Trigger: GCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCGTGCAGGCCAAGGACCCTTCTTGGCTTCCGGGCTCTGAGTTTGTACACTCAGTCTGTCAGGAGCTGCTaGGTGTGGTGGTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PCRPRTLLGFRALSLYTQSVRSC*VWWFLS
Trigger: AGAGAGGAACCACCACACCCAGCAGCTCCTGACAGA...CTGAGTGTACAAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGCCTGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCGGCGTGTGCGTCGGGGTGGAGCAGGCTGACGCTGACCGGATGGGCATGGGAAGAACACTCAACCGGATaGAAGACATTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: AACASGWSRLTLTGWAWEEHSTG*KTFSTF
Trigger: AAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTC...TTCCCATGCCCATCCGGTCAGCGTCAGCCTGCTCCACCCCGACGCACACGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR TCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCTCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCA +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSSLVAS*DPPTGP
Trigger: TGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGA...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269192.11
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR TCA 90 bp GTGGAGAGCACAGCCTCTAAGCGGGACACGTTGAGTTCAGTGTTTGGGTCCAGGCTGCGGGGGAGGATCTaGCATAAGCGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: VESTASKRDTLSSVFGSRLRGRI*HKRVQE
Trigger: TTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAG...CCTGGACCCAAACACTGAACTCAACGTGTCCCGCTTAGAGGCTGTGCTCTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR TCA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGTGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: PSSINMALWRRVGCVRPVWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCAAGTATCAACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSQVSTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTTGATACTTG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598142.5
CDS-3UTR GCA 90 bp ACGCCATTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTCGAAGAGGACTCTGCTaGCAGCCTTGCCGCATACCT +
Preference number: 4 (lower is better)
Translates to: TPFCLAYRTGVLESGLSARRGLC*QPCRIP
Trigger: AGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCG...AGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAATGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSISCLC*LFASMV
Trigger: CACCATCGATGCGAATAAGCAGCAAAGGCAGCTGAT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGGGTGGGGTTTTGCTGTaGCTTCTCTGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRGGVLL*LLWRGL
Trigger: CAGCCCACGCCAGAGAAGGCACAGCAAAACCCCACC...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACGGTGGGGTTTTGCTGTaGCTTCTCTGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYGGVLL*LLWRGL
Trigger: CAGCCCACGCCAGAGAAGGCACAGCAAAACCCCACC...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCGGTGGGGTTTTGCTGTaGCTTCTCTGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCGGVLL*LLWRGL
Trigger: CAGCCCACGCCAGAGAAGGCACAGCAAAACCCCACC...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGCAAGGGAGGAGCCGGAGTTCTaGCAGCAGGGTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: AAWEMAWKVSPREMAKAREEPEF*QQGGVL
Trigger: CAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTC...CCTTGCTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGGAGGAGCCGGAGTTCTaGCAGCAGGGTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLREEPEF*QQGGVL
Trigger: CAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTC...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCTCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSSFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
CDS-3UTR GCA 90 bp CACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTACGAACTGTTTGCTGCTCCCCCTaGTGGCTCTTGAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: HLGGTATVWLCASICLRTVCCSP*WLLSLT
Trigger: GGTCAGGCTCAAGAGCCAGCAGGGGGAGCAGCAAAC...AGTTCGTAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACGTTTGCTGCTCCCCCTaGTGGCTCTTGAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYVCCSP*WLLSLT
Trigger: GGTCAGGCTCAAGAGCCAGCAGGGGGAGCAGCAAAC...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR GCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGGTTTGCTGCTCCCCCTaGTGGCTCTTGAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRVCCSP*WLLSLT
Trigger: GGTCAGGCTCAAGAGCCAGCAGGGGGAGCAGCAAAC...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR GCA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGGAGCTTCCCCGCTTaGCAGCATGTCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: DFTFLPSSINMALWRRVGWSFPA*QHVSMV
Trigger: GACCATGCTGACATGCTGGCAAGCGGGGAAGCTCCA...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681241.1
CDS-3UTR CCA 90 bp TGGCGCCACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTAGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: WRHLGGTATVWLCASICLADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...TAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTGGCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp CCGTGCAGGCCAAGGACCCTTCTTGGCTTCCGGGCTCTGAGTTTGTACACTCAGGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: PCRPRTLLGFRALSLYTQVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...CTGAGTGTACAAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGCCTGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGGTCTGGGAGGCACGATGTGAGCCAAGTTGAGTGGCTTCTCAGGCTGATCTGGTGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: RSGRHDVSQVEWLLRLIWCWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CCA 90 bp GGGCCCTCTAAAGAGGGTCCTTGGAAAAGACTATCCCAGTCTTTTATCCTCTTGGGCCTGCTGATGGTGTaGCTGGGGGAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: GPSKEGPWKRLSQSFILLGLLMV*LGEERG
Trigger: TCCCCGCTCCTCCCCCAGCCACACCATCAGCAGGCC...CAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCCTGAATCCGGCCTGCTGATGGTGTaGCTGGGGGAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: NQTYPNFRPDQPQLFPESGLLMV*LGEERG
Trigger: TCCCCGCTCCTCCCCCAGCCACACCATCAGCAGGCC...GGATTCAGGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGCGGTCCAGTCAGTGGTaGAGTGCCACGTGCAGGATT +
Preference number: 4 (lower is better)
Translates to: FCLAYRTGVLESGLSADVRSSQW*SATCRI
Trigger: AATCCTGCACGTGGCACTCCACCACTGACTGGACCG...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGTGCTGCTCCCCCTGCTaGCTCTTGAGCCTGACCACA +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRCCSPC*LLSLTT
Trigger: TGTGGTCAGGCTCAAGAGCCAGCAGGGGGAGCAGCA...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCGAACACTCAACCGGATaGAAGACTAAGGGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSEHSTG*KTKGEV
Trigger: TACTTCCCCCTTAGTCTTCCATCCGGTTGAGTGTTC...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601125.5
CDS-3UTR TCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACCTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYLGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000679678.1
ENST00000681274.1
CDS-3UTR TCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGCTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRLGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000679678.1
ENST00000681274.1
CDS-3UTR TCA 90 bp GAGTGGCTTCTCAGGCTGATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGATTCTCTGGCGTGGGCTaGGAAGCTTGTTCATGCTCT +
Preference number: 4 (lower is better)
Translates to: EWLLRLIWEHGVQRFTAGFSGVG*EACSCS
Trigger: AGAGCATGAACAAGCTTCTCAGCCCACGCCAGAGAA...TCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR TCA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTATGGGAATTGGCCTGCTaGTGGTGTGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PCVESNQGECSNQRLLDLWELAC*WCGWGR
Trigger: CCTCCCCCAGCCACACCATCAGCAGGCCAATTCCCA...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGATGGGAATTGGCCTGCTaGTGGTGTGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGWELAC*WCGWGR
Trigger: CCTCCCCCAGCCACACCATCAGCAGGCCAATTCCCA...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTACTCCCCCTACTCCTGTaGGGGAGTCCTGCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: PLIWRCGGGLAVLDQCLLLPLLL*GSPAAC
Trigger: ACACGCCGCAGGACTCCCTCACAGGAGTAGGGGGAG...TAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGCTCCCCCTACTCCTGTaGGGGAGTCCTGCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: RRVGCVRPVLINRLSALMLPLLL*GSPAAC
Trigger: ACACGCCGCAGGACTCCCTCACAGGAGTAGGGGGAG...CATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGCTCCCCCTACTCCTGTaGGGGAGTCCTGCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKLPLLL*GSPAAC
Trigger: ACACGCCGCAGGACTCCCTCACAGGAGTAGGGGGAG...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCCTCCCCCTACTCCTGTaGGGGAGTCCTGCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTLPLLL*GSPAAC
Trigger: ACACGCCGCAGGACTCCCTCACAGGAGTAGGGGGAG...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTACTGCGGGGGAGGATCTaGCATAAGCGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLLRGRI*HKRVQE
Trigger: TTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAG...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000681274.1
CDS-3UTR TCA 90 bp CCGTGCAGGCCAAGGACCCTTCTTGGCTTCCGGGCTCTGAGTTTGTACACTCAGCTGTCTCCTTTCACATaGCCACAGAAGGCTACATGC +
Preference number: 4 (lower is better)
Translates to: PCRPRTLLGFRALSLYTQLSPFT*PQKATC
Trigger: GCATGTAGCCTTCTGTGGTCATGTGAAAGGAGACAG...CTGAGTGTACAAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGCCTGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ATGAGGCACCAGTGGCCACCTGCTCCATCTAGAGAGGTATGGGTTCACAGAGGACCAAACGCAGACATGTaGACATCGTACAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: MRHQWPPAPSREVWVHRGPNADM*TSYSRP
Trigger: AGGGCGGCTGTACGATGTTCACATGTCTGCGTTTGG...TCCTCTGTGAACCCATACCTCTCTAGATGGAGCAGGTGGCCACTGGTGCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTACCCCAACTTCCGTCCTaGCCAACCACAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLPQLPS*PTTTVS
Trigger: GGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGG...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGGAGAGCCTGCCCCCTaGGTTCCCTGCTTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGIGEPAP*VPCFSS
Trigger: AGAACTGAAGCAGGGAACTCAGGGGGCAGGCTCTCC...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR TCA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCGTCTGGTCTCAGTGCTaGCGTGGAGTTGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: DFTFLPSSINMALWRRVGVWSQC*RGVERS
Trigger: ACTCCTCTCAACTCCACGTCAGCACTGAGACCAGAC...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
CDS-3UTR TCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCTTCATCAAGCCGGTTTaGACTCTCAAGCATGCCTTT +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSFIKPV*TLKHAF
Trigger: AAAGGCATGCTTGAGAGTTCAAACCGGCTTGATGAA...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591182.5
CDS-3UTR GCA 90 bp GGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTGCTTACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GNMGCKGSRLEAQLRDLLTGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...AAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR GCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGAGGAGCCGGAGTTCTaGCAGCAGGGTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVEEPEF*QQGGVL
Trigger: CAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTC...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGAGGAGCCGGAGTTCTaGCAGCAGGGTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSEEPEF*QQGGVL
Trigger: CAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTC...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAGGAGCCGGAGTTCTaGCAGCAGGGTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGIEEPEF*QQGGVL
Trigger: CAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTC...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCCTGTGAGGGAGTCCTaGGGCGTGTGCGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: NPFFTISSTTPSDQPNLPPVRES*GVCVGV
Trigger: CACCCCGACGCACACGCCGCAGGACTCCCTCACAGG...GGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCTTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSLSPHL*KQLSSF
Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR GCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTCGTACAGCCGCCCTCTaGAGAGGGGGCATGAAGATG +
Preference number: 4 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVRTAAL*RGGMKM
Trigger: CATCTTCATGCCCCCTCTGCAGAGGGCGGCTGTACG...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCTGGTTACAGGTCTGGGAGGCACGATGTGAGCCAAGTTGAGTGGCTTCTCAGGCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: AGYRSGRHDVSQVEWLLRLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...CCTGAGAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAGACCTGTAACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CCA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATGGCCTGCTGATGGTGTaGCTGGGGGAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: VESNQGECSNQRLLDLQDGLLMV*LGEERG
Trigger: TCCCCGCTCCTCCCCCAGCCACACCATCAGCAGGCC...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGGATGGGCATGGGAATTaGCCTGCTGATGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SPPPLIWRCGGGLAVLDQDGHGN*PADGVA
Trigger: AGCCACACCATCAGCAGGCCAATTCCCATGCCCATC...CTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCGTGCAGGCCAAGGACCCTTCTTGGCTTCCGGGCTCTGAGTTTGTACACTCAGCCAGGTTTTCGGGCATaGATTTGCGCTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: PCRPRTLLGFRALSLYTQPGFRA*ICARKA
Trigger: GGCTTTTCTAGCGCAAATCCATGCCCGAAAACCTGG...CTGAGTGTACAAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGCCTGCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGTGGGCCCTGGTCCTTaGGTACCGACACCGCAGTAC +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFVGPGP*VPTPQY
Trigger: GTACTGCGGTGTCGGTACCCAAGGACCAGGGCCCAC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR TCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCCTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSLGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTCTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPLGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCACTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSLGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCCTGAATCCTGGGAATTGGCCTGCTaGTGGTGTGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: NQTYPNFRPDQPQLFPESWELAC*WCGWGR
Trigger: CCTCCCCCAGCCACACCATCAGCAGGCCAATTCCCA...GGATTCAGGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCACAAGATCCTCAAACTaGGTCCGTGCAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSTRSSN*VRANSE
Trigger: TTCTGAATTTGCACGGACTCAGTTTGAGGATCTTGT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGTGGTAGCTCCACTGTaGATGTACCCAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLVVAPL*MYPGFR
Trigger: CCGAAAACCTGGGTACATTCACAGTGGAGCTACCAC...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCCTGAATCCGGTTCCTCTCTTCGGTaGGGCTGCTGCCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: NQTYPNFRPDQPQLFPESGSSLR*GCCQAA
Trigger: AGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACC...GGATTCAGGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GAACAGAGTGGGAGAACAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: EQSGRTGCRSCWLQVWEALSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...TGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTGTTCTCCCACTCTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR TCA 90 bp AGGTCTGGGAGGCACGATGTGAGCCAAGTTGAGTGGCTTCTCAGGCTGATCTGGTCCACATGGATTTGGTaGGTGGTTGGCATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: RSGRHDVSQVEWLLRLIWSTWIW*VVGIRL
Trigger: CAAACGGATGCCAACCACTCACCAAATCCATGTGGA...CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR TCA 90 bp GAGTGGCTTCTCAGGCTGATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGACTGCCGTGGGTAGTTTaGGAACTTCCCGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: EWLLRLIWEHGVQRFTAGLPWVV*ELPEGI
Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAG...TCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR TCA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTCCAAACGCAGACATGTaGACATCGTACAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVAPNADM*TSYSRP
Trigger: AGGGCGGCTGTACGATGTTCACATGTCTGCGTTTGG...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTCCCCAACTTCCGTCCTaGCCAACCACAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVAPQLPS*PTTTVS
Trigger: GGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGG...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CAGAGTGGGAGAACAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGAAGCTTTATGAGGGAATaGTCTTCAGCCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QSGRTGCRSCWLQVWEARSFMRE*SSATGL
Trigger: CAGCCCTGTGGCTGAAGAGCATTCCCTCATAAAGCT...TCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTGTTCTCCCACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR GCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTCGAAGAGGACTCTGCTaGCAGCCTTGCCGCATACCT +
Preference number: 4 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVRRGLC*QPCRIP
Trigger: AGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCG...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCCGAAGAGGACTCTGCTaGCAGCCTTGCCGCATACCT +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSRRGLC*QPCRIP
Trigger: AGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCG...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGCAAGGAGACGAAGAGGACTCTaGTGCCAGCCTTGCCGCATA +
Preference number: 4 (lower is better)
Translates to: AAWEMAWKVSPREMAKARRRRGL*CQPCRI
Trigger: TATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCT...CCTTGCTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAGGTGGGGTTTTGCTGTaGCTTCTCTGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKGGVLL*LLWRGL
Trigger: CAGCCCACGCCAGAGAAGGCACAGCAAAACCCCACC...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR GCA 90 bp CTTGCTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGGGTGGGGTTTTGCTGTaGCTTCTCTGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LAGFALRTGPKSKSGEPRGGVLL*LLWRGL
Trigger: CAGCCCACGCCAGAGAAGGCACAGCAAAACCCCACC...CCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGAGGAGCCGGAGTTCTaGCAGCAGGGTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFEEPEF*QQGGVL
Trigger: CAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCTTTCGGGCATGGATTTaGGCTAGAAAAGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSFRAWI*ARKAFS
Trigger: TGAAAAGGCTTTTCTAGCGCAAATCCATGCCCGAAA...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GCTGATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGAGCTCATTCTCCAGCTaGCGGACAGAGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: ADLGTWGAKVHGWKHSSGSSFSS*RTESFS
Trigger: TGAAAATGACTCTGTCCGGCAGCTGGAGAATGAGCT...CCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR GCA 90 bp GCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGCAAGGAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: AAWEMAWKVSPREMAKARRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...CCTTGCTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVARWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTGCTTAATGCATAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: WGAKVHGWKHSSGTCLMHRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...ATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR GCA 90 bp CCGTGCAGGCCAAGGACCCTTCTTGGCTTCCGGGCTCTGAGTTTGTACACTCAGTTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: PCRPRTLLGFRALSLYTQFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...CTGAGTGTACAAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGCCTGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR GCA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCCCACAGAAGGCTACATaGAGAACACCAGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCPQKAT*RTPGGQ
Trigger: CTGGCCACCTGGTGTTCTGCATGTAGCCTTCTGTGG...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTATCACTTGTGGCTCCTTaGGTGGAATCGAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLSLVAP*VESNQG
Trigger: CCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGA...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCTGCACCTTTCTTCTCTaGACCACGATTTCAGATGAT +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSCTFLL*TTISDD
Trigger: ATCATCTGAAATCGTGGTGCAGAGAAGAAAGGTGCA...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601125.5
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCATACTAGACCTGGGATaGAAGGTAAGTTTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSILDLG*KVSLPF
Trigger: AAAGGGCAAACTTACCTTCCATCCCAGGTCTAGTAT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269192.11
ENST00000591182.5
CDS-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR CCA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PSSINMALWRRVGCVRPVLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGATGTGAGCCAAGTTGAGTGGCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: VVHAGYRSGRHDVSQVEWLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...CCACTCAACTTGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCATGAACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CCA 90 bp CAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGATGTGAGCCAAGTTGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: QGVVHAGYRSGRHDVSQVVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...AACTTGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CCA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTTGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVACWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: RTVEFSLVAPCVESNQGECWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...TTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGCCAAGTTGAGTGGCTTCTCAGGCTGATCTGGGAACATGGGGTGCAAAGGTTCTGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SQVEWLLRLIWEHGVQRFCWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...GAACCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGCCACTCAACTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CCA 90 bp ACGCCATTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTCTTCAGCCACAGGGCTaGATGCACTTATTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: TPFCLAYRTGVLESGLSALQPQG*MHLFPQ
Trigger: CTGAGGGAATAAGTGCATCCAGCCCTGTGGCTGAAG...AGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAATGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
CDS-3UTR CCA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTCAGCCACAGGGCTaGATGCACTTATTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PSSINMALWRRVGCVRPVLQPQG*MHLFPQ
Trigger: CTGAGGGAATAAGTGCATCCAGCCCTGTGGCTGAAG...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
CDS-3UTR CCA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGCTTCAGCCACAGGGCTaGATGCACTTATTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: FCLAYRTGVLESGLSADVLQPQG*MHLFPQ
Trigger: CTGAGGGAATAAGTGCATCCAGCCCTGTGGCTGAAG...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCTCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSSSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: DFTFLPSSINMALWRRVGSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTGGCCTGCTGATGGTGTaGCTGGGGGAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSGLLMV*LGEERG
Trigger: TCCCCGCTCCTCCCCCAGCCACACCATCAGCAGGCC...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTTGCTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGCTGACGCTGACCGGATaGGCATGGGAATTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LAGFALRTGPKSKSGEPRLTLTG*AWELAC
Trigger: GCAGGCCAATTCCCATGCCCATCCGGTCAGCGTCAG...CCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGCTGACGCTGACCGGATaGGCATGGGAATTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ESHAVDFTFLPSSINMALLTLTG*AWELAC
Trigger: GCAGGCCAATTCCCATGCCCATCCGGTCAGCGTCAG...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACTGACGCTGACCGGATaGGCATGGGAATTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PCVESNQGECSNQRLLDLLTLTG*AWELAC
Trigger: GCAGGCCAATTCCCATGCCCATCCGGTCAGCGTCAG...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACGCGTGTGCGTCGGGGTaGAGCAGGCTGACGCTGACC +
Preference number: 4 (lower is better)
Translates to: FKNPFFTISSTTPSDQPNACASG*SRLTLT
Trigger: GGTCAGCGTCAGCCTGCTCCACCCCGACGCACACGC...GTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTGCGTGTGCGTCGGGGTaGAGCAGGCTGACGCTGACC +
Preference number: 4 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSACASG*SRLTLT
Trigger: GGTCAGCGTCAGCCTGCTCCACCCCGACGCACACGC...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGGCGTGTGCGTCGGGGTaGAGCAGGCTGACGCTGACC +
Preference number: 4 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKACASG*SRLTLT
Trigger: GGTCAGCGTCAGCCTGCTCCACCCCGACGCACACGC...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCAGGAGCTGCTGGGTGTaGTGGTTCCTCTCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: TISSTTPSDQPNLPQLPSRSCWV*WFLSSV
Trigger: CACCGAAGAGAGGAACCACCACACCCAGCAGCTCCT...GGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCAAACCATCACCCCACTaGAGTCAGAAATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSKPSPH*SQKSLR
Trigger: TCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR CCA 90 bp CCGTGCAGGCCAAGGACCCTTCTTGGCTTCCGGGCTCTGAGTTTGTACACTCAGGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: PCRPRTLLGFRALSLYTQGRNRI*LTVLCN
Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...CTGAGTGTACAAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGCCTGCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCGTTTGGGGATCTTATaGCACCTGTGGTTTATAAAC +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSRLGIL*HLWFIN
Trigger: GTTTATAAACCACAGGTGCCATAAGATCCCCAAACG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTCGGTCCAGTCAGTGGTaGAGTGCCACGTGCAGGATT +
Preference number: 4 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVRSSQW*SATCRI
Trigger: AATCCTGCACGTGGCACTCCACCACTGACTGGACCG...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGGCTCGGTCCAGTCAGTaGTGGAGTGCCACGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RVGCVRPVLINRLSALMEARSSQ*WSATCR
Trigger: CCTGCACGTGGCACTCCACCACTGACTGGACCGAGC...CTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCCTCCTCCATTAATATaGCGCTGTGGAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: PSSINMALWRRVGCVRPVPPPLI*RCGGGL
Trigger: CAACCCTCCTCCACAGCGCCATATTAATGGAGGAGG...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAACAGAGTGGGAGAACAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACCTCCTCCATTAATATaGCGCTGTGGAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: EQSGRTGCRSCWLQVWEAPPPLI*RCGGGL
Trigger: CAACCCTCCTCCACAGCGCCATATTAATGGAGGAGG...TGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTGTTCTCCCACTCTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CCA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTACCTCCTCCATTAATATaGCGCTGTGGAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLPPPLI*RCGGGL
Trigger: CAACCCTCCTCCACAGCGCCATATTAATGGAGGAGG...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGCCTCCTCCATTAATATaGCGCTGTGGAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: FCLAYRTGVLESGLSADVPPPLI*RCGGGL
Trigger: CAACCCTCCTCCACAGCGCCATATTAATGGAGGAGG...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCCCTCCTCCATTAATATaGCGCTGTGGAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: DFTFLPSSINMALWRRVGPPPLI*RCGGGL
Trigger: CAACCCTCCTCCACAGCGCCATATTAATGGAGGAGG...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTGCTGCTCCCCCTGCTaGCTCTTGAGCCTGACCACA +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFCCSPC*LLSLTT
Trigger: TGTGGTCAGGCTCAAGAGCCAGCAGGGGGAGCAGCA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAATGCTGCTCCCCCTGCTaGCTCTTGAGCCTGACCACA +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKCCSPC*LLSLTT
Trigger: TGTGGTCAGGCTCAAGAGCCAGCAGGGGGAGCAGCA...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTGTATTGCTGACATCTaGGTGACGTGGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYCIADI*VTWALV
Trigger: GACCAGGGCCCACGTCACCCAGATGTCAGCAATACA...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAACATTAATCAGCCAGTaGGTGCCCCCGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSTLISQ*VPPSSR
Trigger: CCTGGAGGACGGGGGCACCCACTGGCTGATTAATGT...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681241.1
3UTR CAA 72 bp CTGGTGTGTTTGGTTCAAGTCACTGCTCACAGAGACTaGGAGTCAACTACAGACCGTGCAGGCCAAGGACCC +
Preference number: 4 (lower is better)
Translates to: LVCLVQVTAHRD*ESTTDRAGQGP
Trigger: GGGTCCTTGGCCTGCACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAACACACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CAA 72 bp TGTCAGGACTTGGCTGGGCACCTACCAACTACGAACTaGGTGTGTGGGTTCAGAGAAGGTTTTTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CQDLAGHLPTTN*VCGFREGFCQP
Trigger: GGGCTGGCAAAAACCTTCTCTGAACCCACACACCAAGTTCGTAGTTGGTAGGTGCCCAGCCAAGTCCTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAACTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKLGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000679678.1
ENST00000681274.1
CDS-3UTR TCA 90 bp CCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PESHAVDFTFLPSSINMALGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...CGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTACGAACTTTCTCTGGCGTGGGCTaGGAAGCTTGTTCATGCTCT +
Preference number: 4 (lower is better)
Translates to: HLGGTATVWLCASICLRTFSGVG*EACSCS
Trigger: AGAGCATGAACAAGCTTCTCAGCCCACGCCAGAGAA...AGTTCGTAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR TCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTCTCTGGCGTGGGCTaGGAAGCTTGTTCATGCTCT +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYFSGVG*EACSCS
Trigger: AGAGCATGAACAAGCTTCTCAGCCCACGCCAGAGAA...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR TCA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTTCTCTGGCGTGGGCTaGGAAGCTTGTTCATGCTCT +
Preference number: 4 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCFSGVG*EACSCS
Trigger: AGAGCATGAACAAGCTTCTCAGCCCACGCCAGAGAA...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACCTCCCCCTACTCCTGTaGGGGAGTCCTGCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: FKNPFFTISSTTPSDQPNLPLLL*GSPAAC
Trigger: ACACGCCGCAGGACTCCCTCACAGGAGTAGGGGGAG...GTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ATGAGGCACCAGTGGCCACCTGCTCCATCTAGAGAGGTATGGGTTCACAGAGGAATGCGATCCAGATCTTaGGCCCTCATCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: MRHQWPPAPSREVWVHRGMRSRS*ALISAN
Trigger: GTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCAT...TCCTCTGTGAACCCATACCTCTCTAGATGGAGCAGGTGGCCACTGGTGCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR TCA 90 bp GTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGATGTGAGCCAAGTTGAGTGGATGCGATCCAGATCTTaGGCCCTCATCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: VVHAGYRSGRHDVSQVEWMRSRS*ALISAN
Trigger: GTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCAT...CCACTCAACTTGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCATGAACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681065.1
CDS-3UTR TCA 90 bp GAGTGGCTTCTCAGGCTGATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGACCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: EWLLRLIWEHGVQRFTAGPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...TCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR TCA 90 bp GTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGATGTGAGCCAAGTTGAGTGGTCCACATGGATTTGGTaGGTGGTTGGCATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: VVHAGYRSGRHDVSQVEWSTWIW*VVGIRL
Trigger: CAAACGGATGCCAACCACTCACCAAATCCATGTGGA...CCACTCAACTTGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCATGAACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR TCA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTATCCACATGGATTTGGTaGGTGGTTGGCATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLSTWIW*VVGIRL
Trigger: CAAACGGATGCCAACCACTCACCAAATCCATGTGGA...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCCTGCGGGGGAGGATCTaGCATAAGCGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGILRGRI*HKRVQE
Trigger: TTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAG...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTCTGCGGGGGAGGATCTaGCATAAGCGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVLRGRI*HKRVQE
Trigger: TTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAG...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTACTGCGGGGGAGGATCTaGCATAAGCGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLLRGRI*HKRVQE
Trigger: TTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAG...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp CCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTTGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: PLTNQTYPNFRPDQPQLFWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...AAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAATGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000681274.1
CDS-3UTR TCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: ESHAVDFTFLPSSINMALWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp CTTGCTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGTGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: LAGFALRTGPKSKSGEPRWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...CCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTTCTGCAGAGGGGGCATaGAGATGTCAGGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVSAEGA*RCQDLA
Trigger: AGCCAAGTCCTGACATCTTCATGCCCCCTCTGCAGA...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCATCTGCAGAGGGGGCATaGAGATGTCAGGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSSAEGA*RCQDLA
Trigger: AGCCAAGTCCTGACATCTTCATGCCCCCTCTGCAGA...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTCCAAACGCAGACATGTaGACATCGTACAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVPNADM*TSYSRP
Trigger: AGGGCGGCTGTACGATGTTCACATGTCTGCGTTTGG...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGGGCAGCCAAGGAGATaGTGTCTGACCAAACGCAGA +
Preference number: 4 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSGQPRR*CLTKRR
Trigger: TCTGCGTTTGGTCAGACATCATCTCCTTGGCTGCCC...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGGAGCTAAGAGAGCTGTGCAAAGAAATCTaGGAACTGTGCAGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: YRTGVLESGLSADVELRELCKEI*ELCSCA
Trigger: GGCACAACTGCACAGTTCTCAGATTTCTTTGCACAG...CTCTCTTAGCTCCACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTCCCCAACTTCCGTCCTaGCCAACCACAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPPQLPS*PTTTVS
Trigger: GGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGG...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ACAAAGAAACAACATATGCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCTCTGGGAACATGGGGTaGAAAGGTTCACGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TKKQHMPARSSQWWSATCSGNMG*KGSRLE
Trigger: TTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGA...GCACGTGGCACTCCACCACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRTGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR GCA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGAGCTTTATGAGGGAATaGTCTTCAGCCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSSINMALWRRVGCVRPVSFMRE*SSATGL
Trigger: CAGCCCTGTGGCTGAAGAGCATTCCCTCATAAAGCT...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
CDS-3UTR GCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAACGAAGAGGACTCTGCTaGCAGCCTTGCCGCATACCT +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKRRGLC*QPCRIP
Trigger: AGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCG...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR GCA 90 bp AGTTGTGCCACTTTGGTGTCAGCCTGTGCTCAGAGACATTTGTCAGGTGAGTTCCGAAGAGGACTCTGCTaGCAGCCTTGCCGCATACCT +
Preference number: 4 (lower is better)
Translates to: SCATLVSACAQRHLSGEFRRGLC*QPCRIP
Trigger: AGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCG...GAACTCACCTGACAAATGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGCGAAGAGGACTCTGCTaGCAGCCTTGCCGCATACCT +
Preference number: 4 (lower is better)
Translates to: WRRVGCVRPVLINRLSALRRGLC*QPCRIP
Trigger: AGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCG...CAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTCGAAGAGGACTCTGCTaGCAGCCTTGCCGCATACCT +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFRRGLC*QPCRIP
Trigger: AGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCG...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp GCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCAGGATTTAAGTTCTGAGATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: ASSVQSVVECHVQDLSSEISCLC*LFASMV
Trigger: CACCATCGATGCGAATAAGCAGCAAAGGCAGCTGAT...CTCAGAACTTAAATCCTGCACGTGGCACTCCACCACTGACTGGACCGAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCAGGATTTAAGTTCTGAGAGCTCAGCAATCAGCTaGCTTTGCTGCTTATTCGCA +
Preference number: 4 (lower is better)
Translates to: ASSVQSVVECHVQDLSSESSAIS*LCCLFA
Trigger: TGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCT...CTCAGAACTTAAATCCTGCACGTGGCACTCCACCACTGACTGGACCGAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCTCAAACTGAGTCCGTaGAAATTCAGAATCCACATT +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSLKLSP*KFRIHI
Trigger: AATGTGGATTCTGAATTTGCACGGACTCAGTTTGAG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTGCACATAGGGATCTaGATCCTCCGTAACCATGTC +
Preference number: 4 (lower is better)
Translates to: PSSINMALWRRVGCVRPVLHIGI*ILRNHV
Trigger: GACATGGTTACGGAGGATGCAGATCCCTATGTGCAG...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCAGGCTGCTGCCAGGCTaGTGTCTTCCTCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: CGGGLAVLDQCLLTGYQLRLLPG*CLPPLC
Trigger: ACACAGAGGAGGAAGACAGCAGCCTGGCAGCAGCCT...GAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGAGGCTGCTGCCAGGCTaGTGTCTTCCTCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: WRRVGCVRPVLINRLSALRLLPG*CLPPLC
Trigger: ACACAGAGGAGGAAGACAGCAGCCTGGCAGCAGCCT...CAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGGGGTCTGTCAGGAGCTaGTGGGTGTGGTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RRVGCVRPVLINRLSALMGSVRS*WVWWFL
Trigger: GAGGAACCACCACACCCAGCAGCTCCTGACAGACCC...CATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp GCTGGTTACAGGTCTGGGAGGCACGATGTGAGCCAAGTTGAGTGGCTTCTCAGGACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: AGYRSGRHDVSQVEWLLRTFASR*RRGNQT
Trigger: GGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGT...CCTGAGAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAGACCTGTAACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCAGCCTGTGTTTGTTTaGTTTTTAACCAGGGATGAA +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSQPVFV*FLTRDE
Trigger: TTCATCCCTGGTTAAAAAGCAAACAAACACAGGCTG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCCTTACAGGACAGGGGTaGTCGAGTCTGGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGILTGQG*SSLVSV
Trigger: CACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAG...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR CCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCTGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSCWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACGCCATTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGCCTTGCCGCATACCTaGCAATTAGCCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: TPFCLAYRTGVLESGLSAALPHT*QLACVL
Trigger: AAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGC...AGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAATGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGCAAGGGTGCCTTCTCTGGCGTaGGCTGAGAAGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: AAWEMAWKVSPREMAKARVPSLA*AEKLVH
Trigger: ATGAACAAGCTTCTCAGCCCACGCCAGAGAAGGCAC...CCTTGCTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACGTGCCTTCTCTGGCGTaGGCTGAGAAGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYVPSLA*AEKLVH
Trigger: ATGAACAAGCTTCTCAGCCCACGCCAGAGAAGGCAC...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR CCA 90 bp CACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTACGAACTTCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: HLGGTATVWLCASICLRTSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...AGTTCGTAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYMRPSN*TISSLR
Trigger: CCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCAT...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR CCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRMRPSN*TISSLR
Trigger: CCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCAT...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTGATGGGCATGGGAATTaGCCTGCTGATGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPDGHGN*PADGVA
Trigger: AGCCACACCATCAGCAGGCCAATTCCCATGCCCATC...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTAGATGGGCATGGGAATTaGCCTGCTGATGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLDGHGN*PADGVA
Trigger: AGCCACACCATCAGCAGGCCAATTCCCATGCCCATC...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTACTGACGCTGACCGGATaGGCATGGGAATTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PLIWRCGGGLAVLDQCLLLTLTG*AWELAC
Trigger: GCAGGCCAATTCCCATGCCCATCCGGTCAGCGTCAG...TAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCCCAGGTTTTCGGGCATaGATTTGCGCTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: DFTFLPSSINMALWRRVGPGFRA*ICARKA
Trigger: GGCTTTTCTAGCGCAAATCCATGCCCGAAAACCTGG...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGCCAGGTTTTCGGGCATaGATTTGCGCTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: SPPPLIWRCGGGLAVLDQPGFRA*ICARKA
Trigger: GGCTTTTCTAGCGCAAATCCATGCCCGAAAACCTGG...CTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCAGCTGCTGGGTGTGGTaGTTCCTCTCTTCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CGGGLAVLDQCLLTGYQLSCWVW*FLSSVR
Trigger: CCTCACCGAAGAGAGGAACCACCACACCCAGCAGCT...GAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGAGCTGCTGGGTGTaGTGGTTCCTCTCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPRSCWV*WFLSSV
Trigger: CACCGAAGAGAGGAACCACCACACCCAGCAGCTCCT...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA +
Preference number: 4 (lower is better)
Translates to: FCLAYRTGVLESGLSADVMLFCR*RVGCDP
Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp TCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTGGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SGNMGCKGSRLEAQLRDLDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...CAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CCA 90 bp AGGTCTGGGAGGCACGATGTGAGCCAAGTTGAGTGGCTTCTCAGGCTGATCTGGGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: RSGRHDVSQVEWLLRLIWDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CCA 90 bp CAGGCTGATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: QADLGTWGAKVHGWKHSSGRNRI*LTVLCN
Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...TGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTGCCAAGGACCCTTCTTaGCTTCCGGGCTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPAKDPS*LPGSEF
Trigger: AAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGC...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGCTGCTCACAGAGACTTaGAGTCAACTACAGACCGTG +
Preference number: 4 (lower is better)
Translates to: SPPPLIWRCGGGLAVLDQLLTET*SQLQTV
Trigger: CACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAG...CTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTGCTCACAGAGACTTaGAGTCAACTACAGACCGTG +
Preference number: 4 (lower is better)
Translates to: PSSINMALWRRVGCVRPVLLTET*SQLQTV
Trigger: CACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAG...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTACTGCTCACAGAGACTTaGAGTCAACTACAGACCGTG +
Preference number: 4 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLLLTET*SQLQTV
Trigger: CACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAG...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCATGTCAGGACTTGGCTaGGCACCTACCAACTACGAA +
Preference number: 4 (lower is better)
Translates to: DFTFLPSSINMALWRRVGMSGLG*APTNYE
Trigger: TTCGTAGTTGGTAGGTGCCCAGCCAAGTCCTGACAT...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ATGAGGCACCAGTGGCCACCTGCTCCATCTAGAGAGGTATGGGTTCACAGAGGACCATCTAGAGAGGTATaGGTTCACAGAGGATGGGCA +
Preference number: 4 (lower is better)
Translates to: MRHQWPPAPSREVWVHRGPSREV*VHRGWA
Trigger: TGCCCATCCTCTGTGAACCCATACCTCTCTAGATGG...TCCTCTGTGAACCCATACCTCTCTAGATGGAGCAGGTGGCCACTGGTGCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGCGGTCCAGTCAGTGGTaGAGTGCCACGTGCAGGATT +
Preference number: 4 (lower is better)
Translates to: ESHAVDFTFLPSSINMALRSSQW*SATCRI
Trigger: AATCCTGCACGTGGCACTCCACCACTGACTGGACCG...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAAGCTCGGTCCAGTCAGTaGTGGAGTGCCACGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PFFTISSTTPSDQPNLPQARSSQ*WSATCR
Trigger: CCTGCACGTGGCACTCCACCACTGACTGGACCGAGC...TTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGTTGTGGCTCCTTGCGTaGAATCGAACCAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: FCLAYRTGVLESGLSADVLWLLA*NRTKGN
Trigger: ATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGGGAGTCCCAGGTGACTaGAGCTTCCCCGCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: TKGNAATKGCWIYKIYLRGVPGD*SFPACQ
Trigger: CTGGCAAGCGGGGAAGCTCCAGTCACCTGGGACTCC...CCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681241.1
CDS-3UTR TCA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCAGCTTCTTAGCAGGTaGTTTTGTGAATGTAAGATT +
Preference number: 4 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSQLLSR*FCECKI
Trigger: AATCTTACATTCACAAAATCACCTGCTAAGAAGCTG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269192.11
ENST00000591182.5
CDS-3UTR TCA 90 bp AGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGCTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RRVGCVRPVLINRLSALMLGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...CATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTTCTCTGGCGTGGGCTaGGAAGCTTGTTCATGCTCT +
Preference number: 4 (lower is better)
Translates to: TISSTTPSDQPNLPQLPSFSGVG*EACSCS
Trigger: AGAGCATGAACAAGCTTCTCAGCCCACGCCAGAGAA...GGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTCTCCCCCTACTCCTGTaGGGGAGTCCTGCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFLPLLL*GSPAAC
Trigger: ACACGCCGCAGGACTCCCTCACAGGAGTAGGGGGAG...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGTGGTAGCTCCACTGTaGATGTACCCAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGIVVAPL*MYPGFR
Trigger: CCGAAAACCTGGGTACATTCACAGTGGAGCTACCAC...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTAGTGGTAGCTCCACTGTaGATGTACCCAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLVVAPL*MYPGFR
Trigger: CCGAAAACCTGGGTACATTCACAGTGGAGCTACCAC...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGTGGTAGCTCCACTGTaGATGTACCCAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVVVAPL*MYPGFR
Trigger: CCGAAAACCTGGGTACATTCACAGTGGAGCTACCAC...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTAGGTTCCTCTCTTCGGTaGGGCTGCTGCCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLGSSLR*GCCQAA
Trigger: AGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACC...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTCTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPLSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCCTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSLSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACCTGCCGTGGGTAGTTTaGGAACTTCCCGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYLPWVV*ELPEGI
Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAG...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000681274.1
CDS-3UTR TCA 90 bp AGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAACTGCCGTGGGTAGTTTaGGAACTTCCCGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: RTVEFSLVAPCVESNQGELPWVV*ELPEGI
Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAG...TTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp GCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCAGGATTTAAGTTCTGAGGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: ASSVQSVVECHVQDLSSEETGSG*LFCVTK
Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...CTCAGAACTTAAATCCTGCACGTGGCACTCCACCACTGACTGGACCGAGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR TCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAACTGCGGGGGAGGATCTaGCATAAGCGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKLRGRI*HKRVQE
Trigger: TTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAG...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000681274.1
CDS-3UTR TCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTCTGCGGGGGAGGATCTaGCATAAGCGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFLRGRI*HKRVQE
Trigger: TTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAG...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp AACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCCTGAATCCTGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: NQTYPNFRPDQPQLFPESWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...GGATTCAGGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp TACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGGAGCTAAGAGAGCTTTTTAACCAGGGATaGACCACGTTACAGAGGATG +
Preference number: 4 (lower is better)
Translates to: YRTGVLESGLSADVELRELFNQG*TTLQRM
Trigger: CATCCTCTGTAACGTGGTTCATCCCTGGTTAAAAAG...CTCTCTTAGCTCCACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGTATCCCCAAGGCAAGTaGTTTGGTTTCAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FCLAYRTGVLESGLSADVYPQGK*FGFKGQ
Trigger: CTGCCCTTTGAAACCAAATCACTTGCCTTGGGGATA...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ACGCCATTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTCTCACTAATGCCAATTaGGCACTTTATCCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: TPFCLAYRTGVLESGLSALTNAN*ALYPQG
Trigger: GCCTTGGGGATAAAGTGCTCAATTGGCATTAGTGAG...AGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAATGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGCCCCAACTTCCGTCCTaGCCAACCACAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: WRRVGCVRPVLINRLSALPQLPS*PTTTVS
Trigger: GGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGG...CAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACGTAGAGGTTAGCTTCTaGGTGCTGTGGGTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYVEVSF*VLWVLG
Trigger: TCCCAAAACCCACAGCACTCAGAAGCTAACCTCTAC...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR TCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGGTAGAGGTTAGCTTCTaGGTGCTGTGGGTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRVEVSF*VLWVLG
Trigger: TCCCAAAACCCACAGCACTCAGAAGCTAACCTCTAC...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR TCA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGGTCACAATTCCAGGTaGAGACACAGTACCACACAT +
Preference number: 4 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLGHNSR*RHSTTH
Trigger: ATGTGTGGTACTGTGTCTTCACCTGGAATTGTGACC...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR TCA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCGTGCTGACGTGGAGTTaGGAGGAGTGTGATAAAAGG +
Preference number: 4 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCVLTWS*EECDKR
Trigger: CCTTTTATCACACTCCTCTCAACTCCACGTCAGCAC...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
CDS-3UTR TCA 90 bp GGATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTCAGGAGTGGTACCACTaGGTCCCAGCCTCGCCGTCG +
Preference number: 4 (lower is better)
Translates to: GCAIHCGTRKKQPPQDVVQEWYH*VPASPS
Trigger: CGACGGCGAGGCTGGGACTCAGTGGTACCACTCCTG...AACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681470.1
CDS-3UTR GCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAAGACGAAGAGGACTCTaGTGCCAGCCTTGCCGCATA +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKRRRGL*CQPCRI
Trigger: TATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCT...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR GCA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTCCTGTGAGGGAGTCCTaGGGCGTGTGCGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: MCNSLWNKKETTPARCSCPVRES*GVCVGV
Trigger: CACCCCGACGCACACGCCGCAGGACTCCCTCACAGG...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAACCTGTGAGGGAGTCCTaGGGCGTGTGCGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: INRLSALMEMDVQFIVEQPVRES*GVCVGV
Trigger: CACCCCGACGCACACGCCGCAGGACTCCCTCACAGG...TTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ACGCCATTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTAGCTCATTCTCCAGCTaGCGGACAGAGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: TPFCLAYRTGVLESGLSASSFSS*RTESFS
Trigger: TGAAAATGACTCTGTCCGGCAGCTGGAGAATGAGCT...AGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAATGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGAGCTCATTCTCCAGCTaGCGGACAGAGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: PSSINMALWRRVGCVRPVSSFSS*RTESFS
Trigger: TGAAAATGACTCTGTCCGGCAGCTGGAGAATGAGCT...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGGCGCCACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTATTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: WRHLGGTATVWLCASICLLSPHL*KQLSSF
Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...TAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTGGCGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp CAGGCTGATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCATTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QADLGTWGAKVHGWKHSSLSPHL*KQLSSF
Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...TGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681065.1
CDS-3UTR GCA 90 bp TCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: SPPPLIWRCGGGLAVLDQFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...CTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp GAGAGCACAGCCTCTAAGCGGGACACGTTGAGTTCAGTGTTTGGGTCCAGGTTGACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: ESTASKRDTLSSVFGSRLTFASR*RRGNQT
Trigger: GGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGT...CAACCTGGACCCAAACACTGAACTCAACGTGTCCCGCTTAGAGGCTGTGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR GCA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: DFTFLPSSINMALWRRVGTFASR*RRGNQT
Trigger: GGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGT...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: FCLAYRTGVLESGLSADVTFASR*RRGNQT
Trigger: GGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGT...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp GTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGATGTGAGCCAAGTTGAGTGGTCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: VVHAGYRSGRHDVSQVEWSFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...CCACTCAACTTGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCATGAACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR GCA 90 bp AAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAACGTACAGCCGCCCTCTaGAGAGGGGGCATGAAGATG +
Preference number: 4 (lower is better)
Translates to: KATCRTPGGQLRQSTFRKRTAAL*RGGMKM
Trigger: CATCTTCATGCCCCCTCTGCAGAGGGCGGCTGTACG...TTTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACTTACAGGACAGGGGTaGTCGAGTCTGGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PCVESNQGECSNQRLLDLLTGQG*SSLVSV
Trigger: CACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAG...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGCTTACAGGACAGGGGTaGTCGAGTCTGGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ESHAVDFTFLPSSINMALLTGQG*SSLVSV
Trigger: CACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAG...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCACTTACAGGACAGGGGTaGTCGAGTCTGGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPLTGQG*SSLVSV
Trigger: CACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAG...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGGCGCCACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTAGAAATAGGCAAACTCTaGCACTACCCAGACGATGTA +
Preference number: 4 (lower is better)
Translates to: WRHLGGTATVWLCASICLEIGKL*HYPDDV
Trigger: TACATCGTCTGGGTAGTGGCAGAGTTTGCCTATTTC...TAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTGGCGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGGAGCGGGGAGAGCCTaGCCCCTGAGTTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PVLINRLSALMEMDVQFIGAGRA*PLSSLL
Trigger: AAGCAGGGAACTCAGGGGGCAGGCTCTCCCCGCTCC...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR CCA 90 bp CCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: PESHAVDFTFLPSSINMAADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...CGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp ACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: TISSTTPSDQPNLPQLPSLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...GGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAATGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKCWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFCWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGGCCTTGCCGCATACCTaGCAATTAGCCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRALPHT*QLACVL
Trigger: AAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGC...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGTGCCTTCTCTGGCGTaGGCTGAGAAGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVVPSLA*AEKLVH
Trigger: ATGAACAAGCTTCTCAGCCCACGCCAGAGAAGGCAC...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: TISSTTPSDQPNLPQLPSSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...GGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSMRPSN*TISSLR
Trigger: CCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCAT...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTGGCCTGCTGATGGTGTaGCTGGGGGAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: MCNSLWNKKETTPARCSCGLLMV*LGEERG
Trigger: TCCCCGCTCCTCCCCCAGCCACACCATCAGCAGGCC...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAGATGGGCATGGGAATTaGCCTGCTGATGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGDGHGN*PADGVA
Trigger: AGCCACACCATCAGCAGGCCAATTCCCATGCCCATC...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATCTGACGCTGACCGGATaGGCATGGGAATTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LFPESHAVDFTFLPSSINLTLTG*AWELAC
Trigger: GCAGGCCAATTCCCATGCCCATCCGGTCAGCGTCAG...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGCCAAGTTGAGTGGCTTCTCAGGCTGATCTGGGAACATGGGGTGCAAAGGTTCCCAGGTTTTCGGGCATaGATTTGCGCTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: SQVEWLLRLIWEHGVQRFPGFRA*ICARKA
Trigger: GGCTTTTCTAGCGCAAATCCATGCCCGAAAACCTGG...GAACCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGCCACTCAACTTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CCA 90 bp CATTTAGTGTACACAGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCGGGCACAGCAGAGGCTaGCTGCTGCCAGTACCAGGG +
Preference number: 4 (lower is better)
Translates to: HLVYTALLNSTLKTETVGGHSRG*LLPVPG
Trigger: CCCTGGTACTGGCAGCAGCCAGCCTCTGCTGTGCCC...GCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCTGTGTACACTAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315456.10
CDS-3UTR CCA 90 bp CCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCCCGCTGCCAGAGTTGTaGGTCATGTGGGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: PQNRNRRPISVVTERNVSPLPEL*VMWAQQ
Trigger: CTGCTGTGCCCACATGACCCACAACTCTGGCAGCGG...GCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315456.10
CDS-3UTR CCA 90 bp CACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTACGAACTATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA +
Preference number: 4 (lower is better)
Translates to: HLGGTATVWLCASICLRTMLFCR*RVGCDP
Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...AGTTCGTAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp TGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTGCTTAATGCATATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA +
Preference number: 4 (lower is better)
Translates to: WGAKVHGWKHSSGTCLMHMLFCR*RVGCDP
Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...ATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CCA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PSSINMALWRRVGCVRPVDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: DFTFLPSSINMALWRRVGGRNRI*LTVLCN
Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp ACGCCATTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTCCAAGGCAAGTGATTTaGTTTCAAAGGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: TPFCLAYRTGVLESGLSAPRQVI*FQRAAK
Trigger: CTTGGCTGCCCTTTGAAACCAAATCACTTGCCTTGG...AGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAATGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCAGTTGTGCCACTTTaGTGTCAGCCTGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVAVVPL*CQPVLR
Trigger: TCTGAGCACAGGCTGACACCAAAGTGGCACAACTGC...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTCAGAAATTGGTCATTaGCGGCAGTTTCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: DFTFLPSSINMALWRRVGSEIGH*RQFPES
Trigger: GGACTCTGGAAACTGCCGCCAATGACCAATTTCTGA...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACGCCATTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTATTAATATGGCGCTGTaGAGGAGGGTTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: TPFCLAYRTGVLESGLSAINMAL*RRVGCV
Trigger: AACACAGCCAACCCTCCTCCACAGCGCCATATTAAT...AGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAATGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CGTAACCATGTCGCCACGCATGGTACTTGTGGTAGCTCCACTGTGAATGTACCCTGGAGTTCTCACTTGTaGCTCCTTGCGTGGAATCGA +
Preference number: 4 (lower is better)
Translates to: RNHVATHGTCGSSTVNVPWSSHL*LLAWNR
Trigger: TCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCA...GGGTACATTCACAGTGGAGCTACCACAAGTACCATGCGTGGCGACATGGTTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CCA 90 bp ATCCTGCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGGCCTGGGAAATGGCCTaGAAAGTATCCCCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: ILLPGKWPGKYPQGKWLKAWEMA*KVSPRE
Trigger: TTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGC...CTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR TCA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VESNQGECSNQRLLDLQDLGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR TCA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTATTCTCTGGCGTGGGCTaGGAAGCTTGTTCATGCTCT +
Preference number: 4 (lower is better)
Translates to: PCVESNQGECSNQRLLDLFSGVG*EACSCS
Trigger: AGAGCATGAACAAGCTTCTCAGCCCACGCCAGAGAA...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCTGGGAATTGGCCTGCTaGTGGTGTGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVWELAC*WCGWGR
Trigger: CCTCCCCCAGCCACACCATCAGCAGGCCAATTCCCA...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AGAGTCCTTGCAATGGCTTTATATGACGATATCAACAACCATGTGATGGAGTTGCTCCCCCTACTCCTGTaGGGGAGTCCTGCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: RVLAMALYDDINNHVMELLPLLL*GSPAAC
Trigger: ACACGCCGCAGGACTCCCTCACAGGAGTAGGGGGAG...CAACTCCATCACATGGTTGTTGATATCGTCATATAAAGCCATTGCAAGGACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGATGTGAGCCAAGTTCTTTTCAGAGGTTGGTaGGGGAACAAGATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: QGVVHAGYRSGRHDVSQVLFRGW*GNKILK
Trigger: TTTGAGGATCTTGTTCCCTCACCAACCTCTGAAAAG...AACTTGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR TCA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTAGTGGTAGCTCCACTGTaGATGTACCCAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: PCVESNQGECSNQRLLDLVVAPL*MYPGFR
Trigger: CCGAAAACCTGGGTACATTCACAGTGGAGCTACCAC...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACGGTTCCTCTCTTCGGTaGGGCTGCTGCCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNGSSLR*GCCQAA
Trigger: AGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACC...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAGGGCGCTTCAGTCACTaGCTCGCCAAACTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKGRFSH*LAKLLE
Trigger: TTCTAAGAGTTTGGCGAGTCAGTGACTGAAGCGCCC...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598774.6
CDS-3UTR TCA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCCCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGCCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000681274.1
CDS-3UTR TCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAACTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKLSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000681274.1
CDS-3UTR TCA 90 bp ATCCTGCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGCTGCCGTGGGTAGTTTaGGAACTTCCCGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: ILLPGKWPGKYPQGKWLKLPWVV*ELPEGI
Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAG...CTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR TCA 90 bp AGCTTCTGTTTCAGGTATTCCTCCATCTGGAGCTCATTCTCCAGCTGCCGGACACTGCCGTGGGTAGTTTaGGAACTTCCCGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: SFCFRYSSIWSSFSSCRTLPWVV*ELPEGI
Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAG...TGTCCGGCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCTGAAACAGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR TCA 90 bp GTGAGCCAAGTTGAGTGGCTTCTCAGGCTGATCTGGGAACATGGGGTGCAAAGGGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: VSQVEWLLRLIWEHGVQRETGSG*LFCVTK
Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR TCA 90 bp GTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATAGGTGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: VNGYHAPWRNQNSSKYYRWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...CCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATTGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: LFPESHAVDFTFLPSSINWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp AACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCTGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: NPFFTISSTTPSDQPNLPWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...GGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTCATCAAGCCGGTTTaGACTCTCAAGCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYFIKPV*TLKHAP
Trigger: AGGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAA...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000597674.5
ENST00000598774.6
ENST00000679936.1
ENST00000681274.1
CDS-3UTR TCA 90 bp CCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTACCAAACGCAGACATGTaGACATCGTACAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PLIWRCGGGLAVLDQCLLPNADM*TSYSRP
Trigger: AGGGCGGCTGTACGATGTTCACATGTCTGCGTTTGG...TAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAAGGGCAGCCAAGGAGATaGTGTCTGACCAAACGCAGA +
Preference number: 4 (lower is better)
Translates to: LSSKDSGVLTCGSLRGIEGQPRR*CLTKRR
Trigger: TCTGCGTTTGGTCAGACATCATCTCCTTGGCTGCCC...TTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTCTCACTAATGCCAATTaGGCACTTTATCCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVALTNAN*ALYPQG
Trigger: GCCTTGGGGATAAAGTGCTCAATTGGCATTAGTGAG...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GAAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAGTCTGGTCTCAGTGCTaGCGTGGAGCTAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: EGYMQNTRWPAKAINIQKVWSQC*RGAKRE
Trigger: CTCTCTCTTAGCTCCACGTCAGCACTGAGACCAGAC...TTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCCCAACTTCCGTCCTaGCCAACCACAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LSSKDSGVLTCGSLRGIEPQLPS*PTTTVS
Trigger: GGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGG...TTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCCCCCAACTTCCGTCCTaGCCAACCACAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTPQLPS*PTTTVS
Trigger: GGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGG...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGACAGCACAACTCCCTCTaGCCAACCAAACTTACCCCA +
Preference number: 4 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGQHNSL*PTKLTP
Trigger: TGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTG...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAACAGCACAACTCCCTCTaGCCAACCAAACTTACCCCA +
Preference number: 4 (lower is better)
Translates to: LLRTVEFSLVAPCVESNQQHNSL*PTKLTP
Trigger: TGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTG...TTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCAATTAGCCTGTGTTCTTCATCAAGCCGGTTTGAACTCTCAAGCATGCGTGCAATGCGATCCAGATCTTaGGCCCTAGGCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: AISLCSSSSRFELSSMRAMRSRS*ALGSLL
Trigger: GAGCAAGGAGCCTAGGGCTCAAGATCTGGATCGCAT...TGCACGCATGCTTGAGAGTTCAAACCGGCTTGATGAAGAACACAGGCTAATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR TCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCGTGCTGACGTGGAGTTaGGAGGAGTGTGATAAAAGG +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSVLTWS*EECDKR
Trigger: CCTTTTATCACACTCCTCTCAACTCCACGTCAGCAC...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
CDS-3UTR TCA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGTGCTGACGTGGAGTTaGGAGGAGTGTGATAAAAGG +
Preference number: 4 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGIVLTWS*EECDKR
Trigger: CCTTTTATCACACTCCTCTCAACTCCACGTCAGCAC...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
CDS-3UTR GCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFTGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp CCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PLTNQTYPNFRPDQPQLFTGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...AAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLRTVEFSLVAPCVESNQTGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...TTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: WRRVGCVRPVLINRLSALTGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...CAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAAACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: MPFLLRTVEFSLVAPCVETGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...TTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGCGAAGAGGACTCTGCTaGCAGCCTTGCCGCATACCT +
Preference number: 4 (lower is better)
Translates to: TKGNAATKGCWIYKIYLRRRGLC*QPCRIP
Trigger: AGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCG...CCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGGCCCTCTAAAGAGGGTCCTTGGAAAAGACTATCCCAGTCTTTTATCCTCTTGAGACGAAGAGGACTCTaGTGCCAGCCTTGCCGCATA +
Preference number: 4 (lower is better)
Translates to: GPSKEGPWKRLSQSFILLRRRGL*CQPCRI
Trigger: TATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCT...CAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ACGTTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCTAGACGAAGAGGACTCTaGTGCCAGCCTTGCCGCATA +
Preference number: 4 (lower is better)
Translates to: TLSSVFGSRLFRAFSRNARRRGL*CQPCRI
Trigger: TATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCT...AGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACTGAACTCAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR GCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYISCLC*LFASMV
Trigger: CACCATCGATGCGAATAAGCAGCAAAGGCAGCTGAT...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR GCA 90 bp CACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTACGAACTAGCTCAGCAATCAGCTaGCTTTGCTGCTTATTCGCA +
Preference number: 4 (lower is better)
Translates to: HLGGTATVWLCASICLRTSSAIS*LCCLFA
Trigger: TGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCT...AGTTCGTAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp ACAAAGAAACAACATATGCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCAGCTCAGCAATCAGCTaGCTTTGCTGCTTATTCGCA +
Preference number: 4 (lower is better)
Translates to: TKKQHMPARSSQWWSATCSSAIS*LCCLFA
Trigger: TGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCT...GCACGTGGCACTCCACCACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCGGTGGGGTTTTGCTGTaGCTTCTCTGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: IEPRGMQQPKVAGFTRSIGGVLL*LLWRGL
Trigger: CAGCCCACGCCAGAGAAGGCACAGCAAAACCCCACC...GATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGGGTGGGGTTTTGCTGTaGCTTCTCTGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKGGVLL*LLWRGL
Trigger: CAGCCCACGCCAGAGAAGGCACAGCAAAACCCCACC...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACCTGTGAGGGAGTCCTaGGGCGTGTGCGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIPVRES*GVCVGV
Trigger: CACCCCGACGCACACGCCGCAGGACTCCCTCACAGG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTCTGCACATAGGGATCTaGATCCTCCGTAACCATGTC +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPLHIGI*ILRNHV
Trigger: GACATGGTTACGGAGGATGCAGATCCCTATGTGCAG...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACGGGTCTGTCAGGAGCTaGTGGGTGTGGTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: FKNPFFTISSTTPSDQPNGSVRS*WVWWFL
Trigger: GAGGAACCACCACACCCAGCAGCTCCTGACAGACCC...GTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCATTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAGGGTCTGTCAGGAGCTaGTGGGTGTGGTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SFKNPFFTISSTTPSDQPGSVRS*WVWWFL
Trigger: GAGGAACCACCACACCCAGCAGCTCCTGACAGACCC...TGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GAAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: EGYMQNTRWPAKAINIQKRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...TTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR GCA 90 bp GAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: EQHPQNRNRRPISVVTERRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...TCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR GCA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp GGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTGCTTCCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: GNMGCKGSRLEAQLRDLLPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...AAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR GCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000681274.1
CDS-3UTR GCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRTFASR*RRGNQT
Trigger: GGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGT...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000681274.1
CDS-3UTR GCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYSFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAGTCAACTACAGACCGTaGAGGCCAAGGACCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPVNYRP*RPRTLL
Trigger: AAGAAGGGTCCTTGGCCTGCACGGTCTGTAGTTGAC...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCCAGTCAGTGGTGGAGTaGCACGTGCAGGATTTAAGT +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSQSVVE*HVQDLS
Trigger: ACTTAAATCCTGCACGTGGCACTCCACCACTGACTG...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCAAAGAAACAACATATaGCAGCTCGGTCCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: PSSINMALWRRVGCVRPVQRNNI*QLGPVS
Trigger: ACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTG...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGCTTACAGGACAGGGGTaGTCGAGTCTGGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: RRVGCVRPVLINRLSALMLTGQG*SSLVSV
Trigger: CACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAG...CATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAATCACTTGTGGCTCCTTaGGTGGAATCGAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: LLRTVEFSLVAPCVESNQSLVAP*VESNQG
Trigger: CCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGA...TTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCCTGAATCCGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: NQTYPNFRPDQPQLFPESADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...GGATTCAGGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAACTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp CCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: PESHAVDFTFLPSSINMAVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...CGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: WRRVGCVRPVLINRLSALVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...CAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: NMALWRRVGCVRPVLINRVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...CCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAATGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LSSKDSGVLTCGSLRGIECWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...TTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAACTTCAGCCACAGGGCTaGATGCACTTATTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKLQPQG*MHLFPQ
Trigger: CTGAGGGAATAAGTGCATCCAGCCCTGTGGCTGAAG...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679678.1
CDS-3UTR CCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTAGCCTTGCCGCATACCTaGCAATTAGCCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLALPHT*QLACVL
Trigger: AAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGC...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTTGCTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGGTGCCTTCTCTGGCGTaGGCTGAGAAGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LAGFALRTGPKSKSGEPRVPSLA*AEKLVH
Trigger: ATGAACAAGCTTCTCAGCCCACGCCAGAGAAGGCAC...CCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAGTGCCTTCTCTGGCGTaGGCTGAGAAGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGVPSLA*AEKLVH
Trigger: ATGAACAAGCTTCTCAGCCCACGCCAGAGAAGGCAC...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGGTGCCTTCTCTGGCGTaGGCTGAGAAGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: PESHAVDFTFLPSSINMAVPSLA*AEKLVH
Trigger: ATGAACAAGCTTCTCAGCCCACGCCAGAGAAGGCAC...CGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAATCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp AATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGTCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: NMALWRRVGCVRPVLINRSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...CCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFMRPSN*TISSLR
Trigger: CCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCAT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: WRRVGCVRPVLINRLSALMRPSN*TISSLR
Trigger: CCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCAT...CAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGGCCTGCTGATGGTGTaGCTGGGGGAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIGLLMV*LGEERG
Trigger: TCCCCGCTCCTCCCCCAGCCACACCATCAGCAGGCC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGGATGGGCATGGGAATTaGCCTGCTGATGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKDGHGN*PADGVA
Trigger: AGCCACACCATCAGCAGGCCAATTCCCATGCCCATC...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCCTGACGCTGACCGGATaGGCATGGGAATTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: IEPRGMQQPKVAGFTRSILTLTG*AWELAC
Trigger: GCAGGCCAATTCCCATGCCCATCCGGTCAGCGTCAG...GATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGCGTGTGCGTCGGGGTaGAGCAGGCTGACGCTGACC +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIACASG*SRLTLT
Trigger: GGTCAGCGTCAGCCTGCTCCACCCCGACGCACACGC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTAGAAGGTGTCCATTaGTCTGCAGGGAGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYLEGVH*SAGRFE
Trigger: CTCAAACCTCCCTGCAGACCAATGGACACCTTCTAA...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598774.6
ENST00000679936.1
CDS-3UTR CCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000681274.1
CDS-3UTR CCA 90 bp CTGATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGAACTGAAATTTTACCATaGCCTTCCGGATCAAACGCT +
Preference number: 4 (lower is better)
Translates to: LIWEHGVQRFTAGSTAQGTEILP*PSGSNA
Trigger: AGCGTTTGATCCGGAAGGCCATGGTAAAATTTCAGT...TCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CCA 90 bp GGAGGGAACAGAGTGGGAGAACAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAAACCATCACCCCACTaGAGTCAGAAATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: GGNRVGEQGVVHAGYRSGKPSPH*SQKSLR
Trigger: TCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTT...CCCAGACCTGTAACCAGCATGAACGACACCCTGTTCTCCCACTCTGTTCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CCA 90 bp GCTGGTTACAGGTCTGGGAGGCACGATGTGAGCCAAGTTGAGTGGCTTCTCAGGAAACCATCACCCCACTaGAGTCAGAAATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: AGYRSGRHDVSQVEWLLRKPSPH*SQKSLR
Trigger: TCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTT...CCTGAGAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAGACCTGTAACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CCA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGGCCAAGGACCCTTCTTaGCTTCCGGGCTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKAKDPS*LPGSEF
Trigger: AAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGC...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGGAGCTAAGAGAGAGAGGCCCCAAAGAATaGATTATTCCTGGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: YRTGVLESGLSADVELRERGPKE*IIPGVF
Trigger: AAACACACCAGGAATAATCCATTCTTTGGGGCCTCT...CTCTCTTAGCTCCACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCGTGCAGGCCAAGGACCCTTCTTGGCTTCCGGGCTCTGAGTTTGTACACTCAGAGAGGAACAAGACCATaGAAGAGCAGAGATAACTTT +
Preference number: 4 (lower is better)
Translates to: PCRPRTLLGFRALSLYTQRGTRP*KSRDNF
Trigger: AAAGTTATCTCTGCTCTTCCATGGTCTTGTTCCTCT...CTGAGTGTACAAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGCCTGCACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCATGTCAGGACTTGGCTaGGCACCTACCAACTACGAA +
Preference number: 4 (lower is better)
Translates to: TISSTTPSDQPNLPQLPSMSGLG*APTNYE
Trigger: TTCGTAGTTGGTAGGTGCCCAGCCAAGTCCTGACAT...GGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGGCAGTTGTGCCACTTTaGTGTCAGCCTGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: ESHAVDFTFLPSSINMALAVVPL*CQPVLR
Trigger: TCTGAGCACAGGCTGACACCAAAGTGGCACAACTGC...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGTTGTGCCACTTTGGTGTCAGCCTGTGCTCAGAGACATTTGTCAGGTGAGTTCAGTATGAGGCACCAGTaGCCACCTGCTCCATCTAGA +
Preference number: 4 (lower is better)
Translates to: SCATLVSACAQRHLSGEFSMRHQ*PPAPSR
Trigger: TCTAGATGGAGCAGGTGGCCACTGGTGCCTCATACT...GAACTCACCTGACAAATGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTATTAATATGGCGCTGTaGAGGAGGGTTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVAINMAL*RRVGCV
Trigger: AACACAGCCAACCCTCCTCCACAGCGCCATATTAAT...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCATTAATATGGCGCTGTaGAGGAGGGTTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCINMAL*RRVGCV
Trigger: AACACAGCCAACCCTCCTCCACAGCGCCATATTAAT...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTTTGTGGCTCCTTGCGTaGAATCGAACCAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPLWLLA*NRTKGN
Trigger: ATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCTTGTGGCTCCTTGCGTaGAATCGAACCAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGILWLLA*NRTKGN
Trigger: ATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCTGGAGTTCTCACTTGTaGCTCCTTGCGTGGAATCGA +
Preference number: 4 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGIWSSHL*LLAWNR
Trigger: TCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCA...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAGGCACTGCCACAGTTTaGCTCTGTGCATCCATCTGT +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKGTATV*LCASIC
Trigger: ACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCC...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp TGCTGTTCTGTAGGTGGAGAGTCGGATGCGATCCAGATCTTGAGCCCTAGGCTCACACAGTACCACACATaGGGTCTAGGAAATTGGAAG +
Preference number: 4 (lower is better)
Translates to: CCSVGGESDAIQILSPRLTQYHT*GLGNWK
Trigger: CTTCCAATTTCCTAGACCCCATGTGTGGTACTGTGT...GAGCCTAGGGCTCAAGATCTGGATCGCATCCGACTCTCCACCTACAGAACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS-3UTR CCA 90 bp GAGAGCACAGCCTCTAAGCGGGACACGTTGAGTTCAGTGTTTGGGTCCAGGTTGGGCTCCTTGCTCTGTTaGATTTGTAACTGCACAAAG +
Preference number: 4 (lower is better)
Translates to: ESTASKRDTLSSVFGSRLGSLLC*ICNCTK
Trigger: CTTTGTGCAGTTACAAATCCAACAGAGCAAGGAGCC...CAACCTGGACCCAAACACTGAACTCAACGTGTCCCGCTTAGAGGCTGTGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS-3UTR CCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGACTTCTCTGCTGAGGTaGAGACGAAGAGGACTCTGC +
Preference number: 4 (lower is better)
Translates to: ESHAVDFTFLPSSINMALTSLLR*RRRGLC
Trigger: GCAGAGTCCTCTTCGTCTCCACCTCAGCAGAGAAGT...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681470.1
3UTR CAA 72 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTaGCGTGGAATCGAACCAAGGGGAATGCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: SSKDSGVLTCGS*RGIEPRGMQQP
Trigger: TGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTACTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLLGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCCTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: IIIFWVNGYHAPWRNQNSLGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...GCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554864.7
ENST00000679731.1
CDS-3UTR TCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTTCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCA +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPSLVAS*DPPTGP
Trigger: TGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGA...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACTCCCCCTACTCCTGTaGGGGAGTCCTGCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVILPLLL*GSPAAC
Trigger: ACACGCCGCAGGACTCCCTCACAGGAGTAGGGGGAG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGACAAGATCCTCAAACTaGGTCCGTGCAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: SPPPLIWRCGGGLAVLDQTRSSN*VRANSE
Trigger: TTCTGAATTTGCACGGACTCAGTTTGAGGATCTTGT...CTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAACTTTTCAGAGGTTGGTaGGGGAACAAGATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: RTVEFSLVAPCVESNQGELFRGW*GNKILK
Trigger: TTTGAGGATCTTGTTCCCTCACCAACCTCTGAAAAG...TTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTAATGCGATCCAGATCTTaGGCCCTCATCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: PCVESNQGECSNQRLLDLMRSRS*ALISAN
Trigger: GTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCAT...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTATGCGATCCAGATCTTaGGCCCTCATCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFMRSRS*ALISAN
Trigger: GTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCAT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
CDS-3UTR TCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCCCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp GAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGACTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: EQHPQNRNRRPISVVTERLSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...TCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp GTTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCTTCCTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: VEFSVWVQVVQSIFPQCFLSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...GAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACTGAACTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS-3UTR TCA 90 bp AGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGCTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: RVGCVRPVLINRLSALMELSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...CTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAATCCACATGGATTTGGTaGGTGGTTGGCATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKSTWIW*VVGIRL
Trigger: CAAACGGATGCCAACCACTCACCAAATCCATGTGGA...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000681274.1
CDS-3UTR TCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTCCACATGGATTTGGTaGGTGGTTGGCATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFSTWIW*VVGIRL
Trigger: CAAACGGATGCCAACCACTCACCAAATCCATGTGGA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCATCCACATGGATTTGGTaGGTGGTTGGCATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPSTWIW*VVGIRL
Trigger: CAAACGGATGCCAACCACTCACCAAATCCATGTGGA...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp GGTTACAGGTCTGGGAGGCACGATGTGAGCCAAGTTGAGTGGCTTCTCAGGCTGATCTTAATTTGTCCATaGTCTTCCCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: GYRSGRHDVSQVEWLLRLILICP*SSLHTM
Trigger: CATTGTGTGGAGGGAAGATCATGGACAAATTAAGAT...CAGCCTGAGAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAGACCTGTAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR TCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTCTGCCGTGGGTAGTTTaGGAACTTCCCGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFLPWVV*ELPEGI
Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAG...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAACTGCCGTGGGTAGTTTaGGAACTTCCCGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: MPFLLRTVEFSLVAPCVELPWVV*ELPEGI
Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAG...TTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRETGSG*LFCVTK
Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000681274.1
CDS-3UTR TCA 90 bp ATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGCTGCGGGGGAGGATCTaGCATAAGCGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: IFWVNGYHAPWRNQNSSKLRGRI*HKRVQE
Trigger: TTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAG...CTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp AACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCTGCGGGGGAGGATCTaGCATAAGCGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: NPFFTISSTTPSDQPNLPLRGRI*HKRVQE
Trigger: TTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAG...GGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp GTGCAAAAATCCCAACTCAACTTAGAAGAGCCTGTCTCCTTTCACATGACCACATGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: VQKSQLNLEEPVSFHMTTWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...TGTGGTCATGTGAAAGGAGACAGGCTCTTCTAAGTTGAGTTGGGATTTTTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR TCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTTTCATCAAGCCGGTTTaGACTCTCAAGCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPFIKPV*TLKHAP
Trigger: AGGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAA...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCGTGCAGGCCAAGGACCCTTCTTGGCTTCCGGGCTCTGAGTTTGTACACTCAGATTCTTCAGGGTTATTaGATGATTGCAAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: PCRPRTLLGFRALSLYTQILQGY*MIASGC
Trigger: ACAACCACTTGCAATCATTCAATAACCCTGAAGAAT...CTGAGTGTACAAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGCCTGCACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTCTGCAGAGGGGGCATaGAGATGTCAGGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: TKGNAATKGCWIYKIYLRSAEGA*RCQDLA
Trigger: AGCCAAGTCCTGACATCTTCATGCCCCCTCTGCAGA...CCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGGCAGCCAAGGAGATaGTGTCTGACCAAACGCAGA +
Preference number: 4 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTGQPRR*CLTKRR
Trigger: TCTGCGTTTGGTCAGACATCATCTCCTTGGCTGCCC...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ATGAGGCACCAGTGGCCACCTGCTCCATCTAGAGAGGTATGGGTTCACAGAGGAGAGACATTTGTCAGGTaGGTTCTCTGGAGAGATATA +
Preference number: 4 (lower is better)
Translates to: MRHQWPPAPSREVWVHRGETFVR*VLWRDI
Trigger: TATATCTCTCCAGAGAACTCACCTGACAAATGTCTC...TCCTCTGTGAACCCATACCTCTCTAGATGGAGCAGGTGGCCACTGGTGCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGGAGTTGGTTGGCAATaGAATAGCTATGACAACGGG +
Preference number: 4 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGIGVGWQ*NSYDNG
Trigger: CCCGTTGTCATAGCTATTTCATTGCCAACCAACTCC...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ACGCCATTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTATATCAACAACCATGTaGTGGAGTTGGTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: TPFCLAYRTGVLESGLSAISTTM*WSWLAM
Trigger: CATTGCCAACCAACTCCATCACATGGTTGTTGATAT...AGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAATGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCGTCTGGTCTCAGTGCTaGCGTGGAGCTAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFVWSQC*RGAKRE
Trigger: CTCTCTCTTAGCTCCACGTCAGCACTGAGACCAGAC...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCGTCTGGTCTCAGTGCTaGCGTGGAGCTAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: NPFFTISSTTPSDQPNLPVWSQC*RGAKRE
Trigger: CTCTCTCTTAGCTCCACGTCAGCACTGAGACCAGAC...GGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAACCACAACTGTTTCCTaGATCCCATGCAGTAGATTT +
Preference number: 4 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLTTTVS*IPCSRF
Trigger: AAATCTACTGCATGGGATTCAGGAAACAGTTGTGGT...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCCCCAACTTCCGTCCTaGCCAACCACAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: VESNQGECSNQRLLDLQDPQLPS*PTTTVS
Trigger: GGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGG...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTACAGCACAACTCCCTCTaGCCAACCAAACTTACCCCA +
Preference number: 4 (lower is better)
Translates to: PLIWRCGGGLAVLDQCLLQHNSL*PTKLTP
Trigger: TGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTG...TAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCCTGAATCCCAGCACAACTCCCTCTaGCCAACCAAACTTACCCCA +
Preference number: 4 (lower is better)
Translates to: NQTYPNFRPDQPQLFPESQHNSL*PTKLTP
Trigger: TGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTG...GGATTCAGGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAACCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCA +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKPLVAS*DPPTGP
Trigger: TGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGG...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR TCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAGTAGAGGTTAGCTTCTaGGTGCTGTGGGTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKVEVSF*VLWVLG
Trigger: TCCCAAAACCCACAGCACTCAGAAGCTAACCTCTAC...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR TCA 90 bp TGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTTCATCAAGCCGGTTTaGACTCTCAAGCATGCGTGC +
Preference number: 4 (lower is better)
Translates to: CGGGLAVLDQCLLTGYQLFIKPV*TLKHAC
Trigger: GCACGCATGCTTGAGAGTTCAAACCGGCTTGATGAA...GAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000680822.1
CDS-3UTR TCA 90 bp TGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTGCTTAATGCATTAGTCATTGGAAGGCCTGGCTaGAACTCTCCCAAACACTCT +
Preference number: 4 (lower is better)
Translates to: CKGSRLEAQLRDLLNALVIGRPG*NSPKHS
Trigger: AGAGTGTTTGGGAGAGTTTCAGCCAGGCCTTCCAAT...GACTAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR GCA 90 bp CTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAAACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LSSKDSGVLTCGSLRGIETGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...TTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAAGCTTTATGAGGGAATaGTCTTCAGCCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKSFMRE*SSATGL
Trigger: CAGCCCTGTGGCTGAAGAGCATTCCCTCATAAAGCT...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679678.1
CDS-3UTR GCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGCTTTATGAGGGAATaGTCTTCAGCCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPSFMRE*SSATGL
Trigger: CAGCCCTGTGGCTGAAGAGCATTCCCTCATAAAGCT...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
CDS-3UTR GCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGTGTACTGTATCCCTTTaGCCTTCAGAAAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRCTVSL*PSEKLE
Trigger: CTCCAGCTTTTCTGAAGGGCAAAGGGATACAGTACA...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000679678.1
CDS-3UTR GCA 90 bp AACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCAGACGAAGAGGACTCTaGTGCCAGCCTTGCCGCATA +
Preference number: 4 (lower is better)
Translates to: NPFFTISSTTPSDQPNLPRRRGL*CQPCRI
Trigger: TATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCT...GGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ATCCTGCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: ILLPGKWPGKYPQGKWLKAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...CTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: TISSTTPSDQPNLPQLPSAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...GGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAAGCTCAGCAATCAGCTaGCTTTGCTGCTTATTCGCA +
Preference number: 4 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSSSAIS*LCCLFA
Trigger: TGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCT...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AAAGAAAACAACCTCGAGTTGGAAAGAGGCCCCAAAGAATGGATTATTCCTGGTGAGGAGCCGGAGTTCTaGCAGCAGGGTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: KENNLELERGPKEWIIPGEEPEF*QQGGVL
Trigger: CAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTC...ACCAGGAATAATCCATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTCCTGTGAGGGAGTCCTaGGGCGTGTGCGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAPVRES*GVCVGV
Trigger: CACCCCGACGCACACGCCGCAGGACTCCCTCACAGG...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ACGCCATTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTTTTCGGGCATGGATTTaGGCTAGAAAAGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: TPFCLAYRTGVLESGLSAFRAWI*ARKAFS
Trigger: TGAAAAGGCTTTTCTAGCGCAAATCCATGCCCGAAA...AGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAATGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAACTGCACATAGGGATCTaGATCCTCCGTAACCATGTC +
Preference number: 4 (lower is better)
Translates to: MPFLLRTVEFSLVAPCVELHIGI*ILRNHV
Trigger: GACATGGTTACGGAGGATGCAGATCCCTATGTGCAG...TTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCAGCTCATTCTCCAGCTaGCGGACAGAGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: TISSTTPSDQPNLPQLPSSSFSS*RTESFS
Trigger: TGAAAATGACTCTGTCCGGCAGCTGGAGAATGAGCT...GGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTAGCTCATTCTCCAGCTaGCGGACAGAGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPSSFSS*RTESFS
Trigger: TGAAAATGACTCTGTCCGGCAGCTGGAGAATGAGCT...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTGGGTCTGTCAGGAGCTaGTGGGTGTGGTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFGSVRS*WVWWFL
Trigger: GAGGAACCACCACACCCAGCAGCTCCTGACAGACCC...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYLSPHL*KQLSSF
Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
CDS-3UTR GCA 90 bp CCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: PQNRNRRPISVVTERNVSRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...GCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR GCA 90 bp AACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: NPFFTISSTTPSDQPNLPRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...GGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000681274.1
CDS-3UTR GCA 90 bp GCCTCTAAGCGGGACACGTTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCAAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: ASKRDTLSSVFGSRLFRAKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...TGCTCTGAACAACCTGGACCCAAACACTGAACTCAACGTGTCCCGCTTAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS-3UTR GCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TGCTGTTCTGTAGGTGGAGAGTCGGATGCGATCCAGATCTTGAGCCCTAGGCTCCCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: CCSVGGESDAIQILSPRLPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...GAGCCTAGGGCTCAAGATCTGGATCGCATCCGACTCTCCACCTACAGAACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS-3UTR GCA 90 bp ATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTCCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: IWEHGVQRFTAGSTAQGLPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...AAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR GCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCATTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp ATCCTGCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: ILLPGKWPGKYPQGKWLKTFASR*RRGNQT
Trigger: GGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGT...CTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCGTCAACTACAGACCGTaGAGGCCAAGGACCCTTCTT +
Preference number: 4 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTVNYRP*RPRTLL
Trigger: AAGAAGGGTCCTTGGCCTGCACGGTCTGTAGTTGAC...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGGTCAACTACAGACCGTaGAGGCCAAGGACCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKVNYRP*RPRTLL
Trigger: AAGAAGGGTCCTTGGCCTGCACGGTCTGTAGTTGAC...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAACAGTCAGTGGTGGAGTaGCACGTGCAGGATTTAAGT +
Preference number: 4 (lower is better)
Translates to: MPFLLRTVEFSLVAPCVEQSVVE*HVQDLS
Trigger: ACTTAAATCCTGCACGTGGCACTCCACCACTGACTG...TTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATCTTACAGGACAGGGGTaGTCGAGTCTGGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LFPESHAVDFTFLPSSINLTGQG*SSLVSV
Trigger: CACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAG...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTATCACTTGTGGCTCCTTaGGTGGAATCGAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: PLIWRCGGGLAVLDQCLLSLVAP*VESNQG
Trigger: CCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGA...TAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGTCACTTGTGGCTCCTTaGGTGGAATCGAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKSLVAP*VESNQG
Trigger: CCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGA...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGGCGCCACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTATTAAATGCACCAACATaGCCCTTAATTCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: WRHLGGTATVWLCASICLLNAPT*PLILPL
Trigger: CAGAGGAAGAATTAAGGGGCATGTTGGTGCATTTAA...TAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTGGCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp AGAACAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGATGTGAGCCATGCACCTTTCTTCTCTaGACCACGATTTCAGATGAT +
Preference number: 4 (lower is better)
Translates to: RTGCRSCWLQVWEARCEPCTFLL*TTISDD
Trigger: ATCATCTGAAATCGTGGTGCAGAGAAGAAAGGTGCA...TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681065.1
CDS-3UTR CCA 90 bp GTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATAGGGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: VNGYHAPWRNQNSSKYYRADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...CCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CCA 90 bp ACAGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: TALLNSTLKTETVGQSLWADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...CCACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CCA 90 bp CCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAAGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: PFFTISSTTPSDQPNLPQADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...TTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: NPFFTISSTTPSDQPNLPADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...GGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCCTGAATCCGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: NQTYPNFRPDQPQLFPESVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...GGATTCAGGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: EQHPQNRNRRPISVVTERVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...TCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CCA 90 bp ATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: IFWVNGYHAPWRNQNSSKCWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...CTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGCCTTGCCGCATACCTaGCAATTAGCCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFALPHT*QLACVL
Trigger: AAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAGCCTTGCCGCATACCTaGCAATTAGCCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKALPHT*QLACVL
Trigger: AAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGC...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp CCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGGCCTTGCCGCATACCTaGCAATTAGCCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PESHAVDFTFLPSSINMAALPHT*QLACVL
Trigger: AAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGC...CGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GTGAGCCAAGTTGAGTGGCTTCTCAGGCTGATCTGGGAACATGGGGTGCAAAGGTCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: VSQVEWLLRLIWEHGVQRSSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CCA 90 bp CTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAAGTGCCTTCTCTGGCGTaGGCTGAGAAGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LSSKDSGVLTCGSLRGIEVPSLA*AEKLVH
Trigger: ATGAACAAGCTTCTCAGCCCACGCCAGAGAAGGCAC...TTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTATCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PLIWRCGGGLAVLDQCLLSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...TAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGTCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCCTGAATCCTCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: NQTYPNFRPDQPQLFPESSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...GGATTCAGGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAATCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: EGYMQNTRWPAKAINIQKSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...TTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKMRPSN*TISSLR
Trigger: CCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCAT...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGGCCCTCTAAAGAGGGTCCTTGGAAAAGACTATCCCAGTCTTTTATCCTCTTGATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: GPSKEGPWKRLSQSFILLMRPSN*TISSLR
Trigger: CCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCAT...CAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGGCCTGCTGATGGTGTaGCTGGGGGAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAGLLMV*LGEERG
Trigger: TCCCCGCTCCTCCCCCAGCCACACCATCAGCAGGCC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAAGATGGGCATGGGAATTaGCCTGCTGATGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PFFTISSTTPSDQPNLPQDGHGN*PADGVA
Trigger: AGCCACACCATCAGCAGGCCAATTCCCATGCCCATC...TTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTCTGACGCTGACCGGATaGGCATGGGAATTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GCAIHCGTRKKQPPQDVVLTLTG*AWELAC
Trigger: GCAGGCCAATTCCCATGCCCATCCGGTCAGCGTCAG...AACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCCAGGTTTTCGGGCATaGATTTGCGCTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: NMALWRRVGCVRPVLINRPGFRA*ICARKA
Trigger: GGCTTTTCTAGCGCAAATCCATGCCCGAAAACCTGG...CCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGAGGTATTCCTCCATCTaGAGCTCATTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ESHAVDFTFLPSSINMALRYSSI*SSFSSC
Trigger: GCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCT...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGAGGTATTCCTCCATCTaGAGCTCATTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: WRRVGCVRPVLINRLSALRYSSI*SSFSSC
Trigger: GCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCT...CAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGAGGTATTCCTCCATCTaGAGCTCATTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NMALWRRVGCVRPVLINRRYSSI*SSFSSC
Trigger: GCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCT...CCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFMLFCR*RVGCDP
Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA +
Preference number: 4 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPMLFCR*RVGCDP
Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp CTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA +
Preference number: 4 (lower is better)
Translates to: LLRTVEFSLVAPCVESNQMLFCR*RVGCDP
Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...TTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp ATCCTGCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ILLPGKWPGKYPQGKWLKDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...CTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp ATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTACTGAAATTTTACCATaGCCTTCCGGATCAAACGCT +
Preference number: 4 (lower is better)
Translates to: IWEHGVQRFTAGSTAQGLTEILP*PSGSNA
Trigger: AGCGTTTGATCCGGAAGGCCATGGTAAAATTTCAGT...AAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVGRNRI*LTVLCN
Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSGRNRI*LTVLCN
Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp ATGAGGCACCAGTGGCCACCTGCTCCATCTAGAGAGGTATGGGTTCACAGAGGATCTAAAGAGGGTCCTTaGAAAAGACTATCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: MRHQWPPAPSREVWVHRGSKEGP*KRLSQS
Trigger: AGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGA...TCCTCTGTGAACCCATACCTCTCTAGATGGAGCAGGTGGCCACTGGTGCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAATGTCAGGACTTGGCTaGGCACCTACCAACTACGAA +
Preference number: 4 (lower is better)
Translates to: LLRTVEFSLVAPCVESNQMSGLG*APTNYE
Trigger: TTCGTAGTTGGTAGGTGCCCAGCCAAGTCCTGACAT...TTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTAGAAGATGTCAGGACTTaGCTGGGCACCTACCAACTA +
Preference number: 4 (lower is better)
Translates to: PCVESNQGECSNQRLLDLEDVRT*LGTYQL
Trigger: TAGTTGGTAGGTGCCCAGCCAAGTCCTGACATCTTC...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCCTGAATCCAGTATGAGGCACCAGTaGCCACCTGCTCCATCTAGA +
Preference number: 4 (lower is better)
Translates to: NQTYPNFRPDQPQLFPESSMRHQ*PPAPSR
Trigger: TCTAGATGGAGCAGGTGGCCACTGGTGCCTCATACT...GGATTCAGGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AAGTGTTGCAGATGCTGCTTGTCCGGGGAACACACTTTGAGAACTATTGTTCTACGGTCCAGTCAGTGGTaGAGTGCCACGTGCAGGATT +
Preference number: 4 (lower is better)
Translates to: KCCRCCLSGEHTLRTIVLRSSQW*SATCRI
Trigger: AATCCTGCACGTGGCACTCCACCACTGACTGGACCG...TAGAACAATAGTTCTCAAAGTGTGTTCCCCGGACAAGCAGCATCTGCAACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATCAGAAATTGGTCATTaGCGGCAGTTTCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLSEIGH*RQFPES
Trigger: GGACTCTGGAAACTGCCGCCAATGACCAATTTCTGA...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAATTAATATGGCGCTGTaGAGGAGGGTTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSINMAL*RRVGCV
Trigger: AACACAGCCAACCCTCCTCCACAGCGCCATATTAAT...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTACCTCCTCCATTAATATaGCGCTGTGGAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: PLIWRCGGGLAVLDQCLLPPPLI*RCGGGL
Trigger: CAACCCTCCTCCACAGCGCCATATTAATGGAGGAGG...TAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGCCTCCTCCATTAATATaGCGCTGTGGAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKPPPLI*RCGGGL
Trigger: CAACCCTCCTCCACAGCGCCATATTAATGGAGGAGG...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGTTGTGGCTCCTTGCGTaGAATCGAACCAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: PESHAVDFTFLPSSINMALWLLA*NRTKGN
Trigger: ATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA...CGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCATGGAGTTCTCACTTGTaGCTCCTTGCGTGGAATCGA +
Preference number: 4 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPWSSHL*LLAWNR
Trigger: TCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCA...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGTTCTCACTTGTaGCTCCTTGCGTGGAATCGA +
Preference number: 4 (lower is better)
Translates to: ESHAVDFTFLPSSINMALWSSHL*LLAWNR
Trigger: TCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCA...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACCTATTTATCTTGGAATaGACGGGCGCTTCAGTCACT +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYLFILE*TGASVT
Trigger: AGTGACTGAAGCGCCCGTCCATTCCAAGATAAATAG...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598774.6
ENST00000679936.1
CDS-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTGCTGGTTACAGGTCTaGGAGGCCAAGTATCAACGA +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFCWLQV*EAKYQR
Trigger: TCGTTGATACTTGGCCTCCCAGACCTGTAACCAGCA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
CDS-3UTR CCA 90 bp ATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGGGGTACCATGCACCCTaGAGGAACCAGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: IFWVNGYHAPWRNQNSSKGYHAP*RNQNSS
Trigger: TGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCC...CTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CCA 90 bp TGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTGCTTAATGCATTAGTCTGGGGTCTAGGAAATTaGAAGGCCTGGCTGAAACTC +
Preference number: 4 (lower is better)
Translates to: CKGSRLEAQLRDLLNALVWGLGN*KAWLKL
Trigger: GAGTTTCAGCCAGGCCTTCCAATTTCCTAGACCCCA...GACTAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR CAA 72 bp AAAATAGTGGAGAGCACAGCCTCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KIVESTASKRDT*SSVFGSRLFRA
Trigger: TGCTCTGAACAACCTGGACCCAAACACTGAACTCAACGTGTCCCGCTTAGAGGCTGTGCTCTCCACTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
3UTR CAA 72 bp ACCTGGCAATTAGCCTGTGTTCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCGTGCACCGTGATCAAGCT +
Preference number: 4 (lower is better)
Translates to: TWQLACVLHQAG*NSQACVHRDQA
Trigger: AGCTTGATCACGGTGCACGCATGCTTGAGAGTTCAAACCGGCTTGATGAAGAACACAGGCTAATTGCCAGGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR CAA 72 bp GGGCATGGATTTGCGCTAGAAAAGCCTTTTCAGAGGTaGGTGAGGGAACAAGATCCTCAAACTGAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: GHGFALEKPFQR*VREQDPQTESV
Trigger: CACGGACTCAGTTTGAGGATCTTGTTCCCTCACCAACCTCTGAAAAGGCTTTTCTAGCGCAAATCCATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR TCA 90 bp CAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCTTTCTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QNRNRRPISVVTERNVSFLGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...AAAGCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554864.7
ENST00000679731.1
CDS-3UTR TCA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTCTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PVLINRLSALMEMDVQFILGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAATATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR TCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCTTCTCTGGCGTGGGCTaGGAAGCTTGTTCATGCTCT +
Preference number: 4 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFFSGVG*EACSCS
Trigger: AGAGCATGAACAAGCTTCTCAGCCCACGCCAGAGAA...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAATTCTCTGGCGTGGGCTaGGAAGCTTGTTCATGCTCT +
Preference number: 4 (lower is better)
Translates to: KATCRTPGGQLRQSTFRKFSGVG*EACSCS
Trigger: AGAGCATGAACAAGCTTCTCAGCCCACGCCAGAGAA...TTTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCA +
Preference number: 4 (lower is better)
Translates to: ESHAVDFTFLPSSINMALSLVAS*DPPTGP
Trigger: TGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGA...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATGGGAATTGGCCTGCTaGTGGTGTGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIWELAC*WCGWGR
Trigger: CCTCCCCCAGCCACACCATCAGCAGGCCAATTCCCA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTCTCCCCCTACTCCTGTaGGGGAGTCCTGCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLALPLLL*GSPAAC
Trigger: ACACGCCGCAGGACTCCCTCACAGGAGTAGGGGGAG...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTCTTTTCAGAGGTTGGTaGGGGAACAAGATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPLFRGW*GNKILK
Trigger: TTTGAGGATCTTGTTCCCTCACCAACCTCTGAAAAG...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCACTTTTCAGAGGTTGGTaGGGGAACAAGATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSLFRGW*GNKILK
Trigger: TTTGAGGATCTTGTTCCCTCACCAACCTCTGAAAAG...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGGTGGTAGCTCCACTGTaGATGTACCCAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: TKGNAATKGCWIYKIYLRVVAPL*MYPGFR
Trigger: CCGAAAACCTGGGTACATTCACAGTGGAGCTACCAC...CCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGGTTCCTCTCTTCGGTaGGGCTGCTGCCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIGSSLR*GCCQAA
Trigger: AGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCAGGATTTAAGTTCTGAGTATGCACTACAAATCTaGGAACAAAAAGTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASSVQSVVECHVQDLSSEYALQI*EQKVSC
Trigger: GCAGCTAACTTTTTGTTCTCAGATTTGTAGTGCATA...CTCAGAACTTAAATCCTGCACGTGGCACTCCACCACTGACTGGACCGAGCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATGGGCGCTTCAGTCACTaGCTCGCCAAACTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: WVNGYHAPWRNQNSSKYYGRFSH*LAKLLE
Trigger: TTCTAAGAGTTTGGCGAGTCAGTGACTGAAGCGCCC...ATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315456.10
CDS-3UTR TCA 90 bp CTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAAATGCGATCCAGATCTTaGGCCCTCATCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: LSSKDSGVLTCGSLRGIEMRSRS*ALISAN
Trigger: GTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCAT...TTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTCCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp CCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCCTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PQNRNRRPISVVTERNVSLSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...GCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATCTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LFPESHAVDFTFLPSSINLSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGTCCACATGGATTTGGTaGGTGGTTGGCATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKSTWIW*VVGIRL
Trigger: CAAACGGATGCCAACCACTCACCAAATCCATGTGGA...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGATCTTAATTTGTCCATaGTCTTCCCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: FCLAYRTGVLESGLSADVILICP*SSLHTM
Trigger: CATTGTGTGGAGGGAAGATCATGGACAAATTAAGAT...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCCTGCCGTGGGTAGTTTaGGAACTTCCCGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTLPWVV*ELPEGI
Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAG...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp AAGTGTTGCAGATGCTGCTTGTCCGGGGAACACACTTTGAGAACTATTGTTCTACTGCGGGGGAGGATCTaGCATAAGCGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: KCCRCCLSGEHTLRTIVLLRGRI*HKRVQE
Trigger: TTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAG...TAGAACAATAGTTCTCAAAGTGTGTTCCCCGGACAAGCAGCATCTGCAACACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR TCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACCTGCGGGGGAGGATCTaGCATAAGCGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNLRGRI*HKRVQE
Trigger: TTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAG...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTTCATCAAGCCGGTTTaGACTCTCAAGCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFFIKPV*TLKHAP
Trigger: AGGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000597674.5
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCCTTTTTAACCAGGGATaGACCACGTTACAGAGGATG +
Preference number: 4 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGILFNQG*TTLQRM
Trigger: CATCCTCTGTAACGTGGTTCATCCCTGGTTAAAAAG...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCCTGTCTCCTTTCACATaGCCACAGAAGGCTACATGC +
Preference number: 4 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTLSPFT*PQKATC
Trigger: GCATGTAGCCTTCTGTGGTCATGTGAAAGGAGACAG...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GAAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAACTGTCTCCTTTCACATaGCCACAGAAGGCTACATGC +
Preference number: 4 (lower is better)
Translates to: EGYMQNTRWPAKAINIQKLSPFT*PQKATC
Trigger: GCATGTAGCCTTCTGTGGTCATGTGAAAGGAGACAG...TTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCAGGATTTAAGTTCTGAGCTCTGGAGAGATATATaGTTAAGTATGTCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: ASSVQSVVECHVQDLSSELWRDI*LSMSRD
Trigger: ATCCCTTGACATACTTAATCATATATCTCTCCAGAG...CTCAGAACTTAAATCCTGCACGTGGCACTCCACCACTGACTGGACCGAGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTAGCAGTGGAAAAGAGATaGACATTAAGACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLAVEKR*TLRHPN
Trigger: GTTGGGGTGTCTTAATGTTCATCTCTTTTCCACTGC...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGGTCTGGTCTCAGTGCTaGCGTGGAGCTAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKVWSQC*RGAKRE
Trigger: CTCTCTCTTAGCTCCACGTCAGCACTGAGACCAGAC...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGAATGGACAGGACAAGTaGAACTTGCTGGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: ESHAVDFTFLPSSINMALNGQDK*NLLGLH
Trigger: GTGCAAACCCAGCAAGTTTCACTTGTCCTGTCCATT...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCAATGGACAGGACAAGTaGAACTTGCTGGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: CGGGLAVLDQCLLTGYQLNGQDK*NLLGLH
Trigger: GTGCAAACCCAGCAAGTTTCACTTGTCCTGTCCATT...GAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAAACCACAACTGTTTCCTaGATCCCATGCAGTAGATTT +
Preference number: 4 (lower is better)
Translates to: RTVEFSLVAPCVESNQGETTTVS*IPCSRF
Trigger: AAATCTACTGCATGGGATTCAGGAAACAGTTGTGGT...TTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCACCACAACTGTTTCCTaGATCCCATGCAGTAGATTT +
Preference number: 4 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCTTTVS*IPCSRF
Trigger: AAATCTACTGCATGGGATTCAGGAAACAGTTGTGGT...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACCCCCAACTTCCGTCCTaGCCAACCACAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNPQLPS*PTTTVS
Trigger: GGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGG...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAACAGCACAACTCCCTCTaGCCAACCAAACTTACCCCA +
Preference number: 4 (lower is better)
Translates to: KATCRTPGGQLRQSTFRKQHNSL*PTKLTP
Trigger: TGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTG...TTTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTTAGAGCAAAAGCAATaGGAAAACCGCAGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFLEQKQ*ENRRSA
Trigger: TGCCGACCTGCGGTTTTCTCATTGCTTTTGCTCTAA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCCCGCTGTTGGCCCCCTaGGATGCAGAAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFPLLAP*DAEAAE
Trigger: CTCAGCAGCTTCTGCATCTCAGGGGGCCAACAGCGG...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR TCA 90 bp GTTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCTTCATTGGAAGGCCTGGCTaGAACTCTCCCAAACACTCT +
Preference number: 4 (lower is better)
Translates to: VEFSVWVQVVQSIFPQCFIGRPG*NSPKHS
Trigger: AGAGTGTTTGGGAGAGTTTCAGCCAGGCCTTCCAAT...GAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACTGAACTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS-3UTR TCA 90 bp ATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCGTCTGGTCTCAGTGCTaGCGTGGAGTTGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: IEPRGMQQPKVAGFTRSIVWSQC*RGVERS
Trigger: ACTCCTCTCAACTCCACGTCAGCACTGAGACCAGAC...GATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
CDS-3UTR GCA 90 bp CCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCTCTGGGAACATGGGGTaGAAAGGTTCACGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: PQNRNRRPISVVTERNVSSGNMG*KGSRLE
Trigger: TTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGA...GCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR GCA 90 bp ATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: IFWVNGYHAPWRNQNSSKTGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...CTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR GCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFTGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTCGAAGAGGACTCTGCTaGCAGCCTTGCCGCATACCT +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFRRGLC*QPCRIP
Trigger: AGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCG...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTCGAAGAGGACTCTGCTaGCAGCCTTGCCGCATACCT +
Preference number: 4 (lower is better)
Translates to: GCAIHCGTRKKQPPQDVVRRGLC*QPCRIP
Trigger: AGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCG...AACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCAGACGAAGAGGACTCTaGTGCCAGCCTTGCCGCATA +
Preference number: 4 (lower is better)
Translates to: IEPRGMQQPKVAGFTRSIRRRGL*CQPCRI
Trigger: TATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCT...GATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTAGACGAAGAGGACTCTaGTGCCAGCCTTGCCGCATA +
Preference number: 4 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSRRRGL*CQPCRI
Trigger: TATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCT...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCATTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAGACGAAGAGGACTCTaGTGCCAGCCTTGCCGCATA +
Preference number: 4 (lower is better)
Translates to: SFKNPFFTISSTTPSDQPRRRGL*CQPCRI
Trigger: TATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCT...TGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFISCLC*LFASMV
Trigger: CACCATCGATGCGAATAAGCAGCAAAGGCAGCTGAT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp CTTGCTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: LAGFALRTGPKSKSGEPRISCLC*LFASMV
Trigger: CACCATCGATGCGAATAAGCAGCAAAGGCAGCTGAT...CCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR GCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTAGCTCAGCAATCAGCTaGCTTTGCTGCTTATTCGCA +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFSSAIS*LCCLFA
Trigger: TGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGAGCTCAGCAATCAGCTaGCTTTGCTGCTTATTCGCA +
Preference number: 4 (lower is better)
Translates to: WRRVGCVRPVLINRLSALSSAIS*LCCLFA
Trigger: TGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCT...CAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGGTGGGGTTTTGCTGTaGCTTCTCTGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: INRLSALMEMDVQFIVEQGGVLL*LLWRGL
Trigger: CAGCCCACGCCAGAGAAGGCACAGCAAAACCCCACC...TTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGGTGGGGTTTTGCTGTaGCTTCTCTGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKGGVLL*LLWRGL
Trigger: CAGCCCACGCCAGAGAAGGCACAGCAAAACCCCACC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp ATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAGGAGCCGGAGTTCTaGCAGCAGGGTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: INRLSALMEMDVQFIVEQEEPEF*QQGGVL
Trigger: CAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTC...TTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAGAGGAGCCGGAGTTCTaGCAGCAGGGTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLEEPEF*QQGGVL
Trigger: CAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTC...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCCTGCACATAGGGATCTaGATCCTCCGTAACCATGTC +
Preference number: 4 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTLHIGI*ILRNHV
Trigger: GACATGGTTACGGAGGATGCAGATCCCTATGTGCAG...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCCGAAGGAATTGGTCATATCGTCCATAAACCATCACCCCACTGGAGTCAGAAACTGCACATAGGGATCTaGATCCTCCGTAACCATGTC +
Preference number: 4 (lower is better)
Translates to: PEGIGHIVHKPSPHWSQKLHIGI*ILRNHV
Trigger: GACATGGTTACGGAGGATGCAGATCCCTATGTGCAG...TTTCTGACTCCAGTGGGGTGATGGTTTATGGACGATATGACCAATTCCTTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR GCA 90 bp CCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTACTGCACATAGGGATCTaGATCCTCCGTAACCATGTC +
Preference number: 4 (lower is better)
Translates to: PLIWRCGGGLAVLDQCLLLHIGI*ILRNHV
Trigger: GACATGGTTACGGAGGATGCAGATCCCTATGTGCAG...TAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTAGGCTGCTGCCAGGCTaGTGTCTTCCTCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PVLINRLSALMEMDVQFIRLLPG*CLPPLC
Trigger: ACACAGAGGAGGAAGACAGCAGCCTGGCAGCAGCCT...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AGAGTCCTTGCAATGGCTTTATATGACGATATCAACAACCATGTGATGGAGTTGGGGTCTGTCAGGAGCTaGTGGGTGTGGTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RVLAMALYDDINNHVMELGSVRS*WVWWFL
Trigger: GAGGAACCACCACACCCAGCAGCTCCTGACAGACCC...CAACTCCATCACATGGTTGTTGATATCGTCATATAAAGCCATTGCAAGGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCTTTAAGTGCCGGGTCCGCTaGCAGAGTTGTGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: QNRNRRPISVVTERNVSFKCRVR*QSCGSC
Trigger: ACATGACCCACAACTCTGGCAGCGGACCCGGCACTT...AAAGCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315456.10
CDS-3UTR GCA 90 bp AGAGTGGGAGAACAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGATCAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: RVGEQGVVHAGYRSGRHDQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...ATCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTGTTCTCCCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR GCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp TCATTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: SFKNPFFTISSTTPSDQPRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...TGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTAAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGATTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAATTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000681274.1
CDS-3UTR GCA 90 bp AATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: NMALWRRVGCVRPVLINRTFASR*RRGNQT
Trigger: GGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGT...CCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFSFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGATCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGSFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp TCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGCAGCCTGTGTTTGTTTaGTTTTTAACCAGGGATGAA +
Preference number: 4 (lower is better)
Translates to: SPPPLIWRCGGGLAVLDQQPVFV*FLTRDE
Trigger: TTCATCCCTGGTTAAAAAGCAAACAAACACAGGCTG...CTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCATTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCACCACAGAAGGCTACATaGAGAACACCAGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SFKNPFFTISSTTPSDQPPQKAT*RTPGGQ
Trigger: CTGGCCACCTGGTGTTCTGCATGTAGCCTTCTGTGG...TGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GCCAAAACGAGAGGAACAAGACCATGGAAGAGCAGAGATAACTTTAGTCCGTTTCCACAGAAGGCTACATaGAGAACACCAGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AKTRGTRPWKSRDNFSPFPQKAT*RTPGGQ
Trigger: CTGGCCACCTGGTGTTCTGCATGTAGCCTTCTGTGG...AAACGGACTAAAGTTATCTCTGCTCTTCCATGGTCTTGTTCCTCTCGTTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTCCACAGAAGGCTACATaGAGAACACCAGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTPQKAT*RTPGGQ
Trigger: CTGGCCACCTGGTGTTCTGCATGTAGCCTTCTGTGG...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCAGAACTGTGCAGTTGTaGCACTTTGGTGTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTRTVQL*HFGVSL
Trigger: CAGGCTGACACCAAAGTGGCACAACTGCACAGTTCT...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGCTTACAGGACAGGGGTaGTCGAGTCTGGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKLTGQG*SSLVSV
Trigger: CACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAG...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACCTTACAGGACAGGGGTaGTCGAGTCTGGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNLTGQG*SSLVSV
Trigger: CACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAG...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCTCACTTGTGGCTCCTTaGGTGGAATCGAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFSLVAP*VESNQG
Trigger: CCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGA...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAGTTTGCTGCTCCCCCTaGTGGCTCTTGAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLVCCSP*WLLSLT
Trigger: GGTCAGGCTCAAGAGCCAGCAGGGGGAGCAGCAAAC...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR GCA 90 bp CTTGCTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGGGTCCTGCTTTAAACTaGAAGTACCTGCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LAGFALRTGPKSKSGEPRGPALN*KYLPSF
Trigger: GAAGGAAGGCAGGTACTTGCAGTTTAAAGCAGGACC...CCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACATACTAGACCTGGGATaGAAGGTAAGTTTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYILDLG*KVSLPF
Trigger: AAAGGGCAAACTTACCTTCCATCCCAGGTCTAGTAT...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597674.5
ENST00000679678.1
CDS-3UTR CCA 90 bp GTGCAAAAATCCCAACTCAACTTAGAAGAGCCTGTCTCCTTTCACATGACCACAGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: VQKSQLNLEEPVSFHMTTADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...TGTGGTCATGTGAAAGGAGACAGGCTCTTCTAAGTTGAGTTGGGATTTTTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTAGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATAGGCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: VNGYHAPWRNQNSSKYYRLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...CCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: LFPESHAVDFTFLPSSINVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLCWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAAGCCTTGCCGCATACCTaGCAATTAGCCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LSSKDSGVLTCGSLRGIEALPHT*QLACVL
Trigger: AAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGC...TTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGTCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRSSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGTGCCTTCTCTGGCGTaGGCTGAGAAGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTVPSLA*AEKLVH
Trigger: ATGAACAAGCTTCTCAGCCCACGCCAGAGAAGGCAC...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTMRPSN*TISSLR
Trigger: CCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCAT...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAACTGACGCTGACCGGATaGGCATGGGAATTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: INRLSALMEMDVQFIVEQLTLTG*AWELAC
Trigger: GCAGGCCAATTCCCATGCCCATCCGGTCAGCGTCAG...TTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAAGCGTGTGCGTCGGGGTaGAGCAGGCTGACGCTGACC +
Preference number: 4 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKACASG*SRLTLT
Trigger: GGTCAGCGTCAGCCTGCTCCACCCCGACGCACACGC...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGCCAGGTTTTCGGGCATaGATTTGCGCTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: RVGCVRPVLINRLSALMEPGFRA*ICARKA
Trigger: GGCTTTTCTAGCGCAAATCCATGCCCGAAAACCTGG...CTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCCTGAATCCAGGTATTCCTCCATCTaGAGCTCATTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NQTYPNFRPDQPQLFPESRYSSI*SSFSSC
Trigger: GCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCT...GGATTCAGGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGGCCCTCTAAAGAGGGTCCTTGGAAAAGACTATCCCAGTCTTTTATCCTCTTGAGGTATTCCTCCATCTaGAGCTCATTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GPSKEGPWKRLSQSFILLRYSSI*SSFSSC
Trigger: GCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCT...CAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCAGCTGCTGGGTGTGGTaGTTCCTCTCTTCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSSCWVW*FLSSVR
Trigger: CCTCACCGAAGAGAGGAACCACCACACCCAGCAGCT...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCAGGAGCTGCTGGGTGTaGTGGTTCCTCTCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVRSCWV*WFLSSV
Trigger: CACCGAAGAGAGGAACCACCACACCCAGCAGCTCCT...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTAGGAGCTGCTGGGTGTaGTGGTTCCTCTCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFRSCWV*WFLSSV
Trigger: CACCGAAGAGAGGAACCACCACACCCAGCAGCTCCT...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATAGGAGCTGCTGGGTGTaGTGGTTCCTCTCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: NRTKGNAATKGCWIYKIYRSCWV*WFLSSV
Trigger: CACCGAAGAGAGGAACCACCACACCCAGCAGCTCCT...ATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATAGGAATATTTGAGTTGTGGGTCATGTaGGCACAGCAGAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GTMHPGGTRTAQSIIGIFELWVM*AQQRLA
Trigger: AGCCAGCCTCTGCTGTGCCCACATGACCCACAACTC...AAATATTCCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315456.10
CDS-3UTR CCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCCGCTGCCAGAGTTGTaGGTCATGTGGGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKPLPEL*VMWAQQ
Trigger: CTGCTGTGCCCACATGACCCACAACTCTGGCAGCGG...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598774.6
CDS-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTTAGAAGGTGTCCATTaGTCTGCAGGGAGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFLEGVH*SAGRFE
Trigger: CTCAAACCTCCCTGCAGACCAATGGACACCTTCTAA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000598774.6
ENST00000679936.1
CDS-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAACCATCACCCCACTaGAGTCAGAAATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRKPSPH*SQKSLR
Trigger: TCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTT...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000681274.1
CDS-3UTR CCA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTAGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: PCVESNQGECSNQRLLDLGRNRI*LTVLCN
Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGGAACACTCAACCGGATaGAAGACATTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: FCLAYRTGVLESGLSADVEHSTG*KTFSTF
Trigger: AAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTC...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGGAACACTCAACCGGATaGAAGACATTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: PSSINMALWRRVGCVRPVEHSTG*KTFSTF
Trigger: AAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTC...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp TCATTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAGCCAAGGACCCTTCTTaGCTTCCGGGCTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: SFKNPFFTISSTTPSDQPAKDPS*LPGSEF
Trigger: AAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGC...TGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCAGAGGCCCCAAAGAATaGATTATTCCTGGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCRGPKE*IIPGVF
Trigger: AAACACACCAGGAATAATCCATTCTTTGGGGCCTCT...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTACCAACTACGAACTTaGTGTGTGGGTTCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: TISSTTPSDQPNLPQLPSYQLRT*CVGSEK
Trigger: CTTCTCTGAACCCACACACCAAGTTCGTAGTTGGTA...GGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCATACCAACTACGAACTTaGTGTGTGGGTTCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSYQLRT*CVGSEK
Trigger: CTTCTCTGAACCCACACACCAAGTTCGTAGTTGGTA...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATGCAGTTGTGCCACTTTaGTGTCAGCCTGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VESNQGECSNQRLLDLQDAVVPL*CQPVLR
Trigger: TCTGAGCACAGGCTGACACCAAAGTGGCACAACTGC...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGAGAGAAAAGGTGGCTaGTTAGTCAGAAATTGGTCA +
Preference number: 4 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVAERKGG*LVRNWS
Trigger: TGACCAATTTCTGACTAACCAGCCACCTTTTCTCTC...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTAATTAATATGGCGCTGTaGAGGAGGGTTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: PCVESNQGECSNQRLLDLINMAL*RRVGCV
Trigger: AACACAGCCAACCCTCCTCCACAGCGCCATATTAAT...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGTGGAGTTCTCACTTGTaGCTCCTTGCGTGGAATCGA +
Preference number: 4 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKWSSHL*LLAWNR
Trigger: TCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCA...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAATCCTATTTATCTTaGAATGGACGGGCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRKSYLS*NGRALQ
Trigger: CTGAAGCGCCCGTCCATTCCAAGATAAATAGGATTT...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598774.6
CDS-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACAAATCCTATTTATCTTaGAATGGACGGGCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYKSYLS*NGRALQ
Trigger: CTGAAGCGCCCGTCCATTCCAAGATAAATAGGATTT...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598774.6
ENST00000679936.1
CDS-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACGTAAGGATTCTGCTTTaGGGAAGAGCCAAAAAGATG +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYVRILL*GRAKKM
Trigger: CATCTTTTTGGCTCTTCCCCAAAGCAGAATCCTTAC...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR CCA 90 bp CACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTACGAACTTGTTTACGAACTTCCTaGTCCATAGGAGCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: HLGGTATVWLCASICLRTCLRTS*SIGAFQ
Trigger: TTGAAAGGCTCCTATGGACCAGGAAGTTCGTAAACA...AGTTCGTAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGCAGTGGCGCCACCTTaGGGGCACTGCCACAGTTTG +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRAVAPP*GHCHSL
Trigger: CAAACTGTGGCAGTGCCCCCAAGGTGGCGCCACTGC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp ACGTTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCTTGGGGTCTAGGAAATTaGAAGGCCTGGCTGAAACTC +
Preference number: 4 (lower is better)
Translates to: TLSSVFGSRLFRAFSRNAWGLGN*KAWLKL
Trigger: GAGTTTCAGCCAGGCCTTCCAATTTCCTAGACCCCA...AGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACTGAACTCAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
3UTR CAA 72 bp TGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGCTTCTTAGCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: CKGSRLEAQLRD*LNALVSFLAGD
Trigger: ATCACCTGCTAAGAAGCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGGGAGGAAGGGGGACTaGATACTAGACCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKGRKGD*ILDLGW
Trigger: CCATCCCAGGTCTAGTATTCAGTCCCCCTTCCTCCC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597674.5
ENST00000679678.1
CDS-3UTR TCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTACTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLLGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000679678.1
ENST00000681274.1
CDS-3UTR TCA 90 bp CTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACCTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LDLQDLSTVNSQELIRVDLGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...GTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: RRVGCVRPVLINRLSALMYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...CATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGTCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCA +
Preference number: 4 (lower is better)
Translates to: RRVGCVRPVLINRLSALMSLVAS*DPPTGP
Trigger: TGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGA...CATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTACAAGATCCTCAAACTaGGTCCGTGCAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPTRSSN*VRANSE
Trigger: TTCTGAATTTGCACGGACTCAGTTTGAGGATCTTGT...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTAACAAGATCCTCAAACTaGGTCCGTGCAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLTRSSN*VRANSE
Trigger: TTCTGAATTTGCACGGACTCAGTTTGAGGATCTTGT...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTTTTCAGAGGTTGGTaGGGGAACAAGATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: PESHAVDFTFLPSSINMALFRGW*GNKILK
Trigger: TTTGAGGATCTTGTTCCCTCACCAACCTCTGAAAAG...CGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAGGTTCCTCTCTTCGGTaGGGCTGCTGCCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QRLLDLQDLSTVNSQELIGSSLR*GCCQAA
Trigger: AGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACC...TATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATAGGATGCGATCCAGATCTTaGGCCCTCATCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: VNGYHAPWRNQNSSKYYRMRSRS*ALISAN
Trigger: GTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCAT...CCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp ACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGATGCGATCCAGATCTTaGGCCCTCATCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: TKGNAATKGCWIYKIYLRMRSRS*ALISAN
Trigger: GTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCAT...CCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp AGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGCCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RVGCVRPVLINRLSALMEPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...CTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTCTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTLSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGCTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKLSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp ACAGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTCCACATGGATTTGGTaGGTGGTTGGCATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: TALLNSTLKTETVGQSLWSTWIW*VVGIRL
Trigger: CAAACGGATGCCAACCACTCACCAAATCCATGTGGA...CCACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCATCTTAATTTGTCCATaGTCTTCCCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCILICP*SSLHTM
Trigger: CATTGTGTGGAGGGAAGATCATGGACAAATTAAGAT...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACATCTTAATTTGTCCATaGTCTTCCCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYILICP*SSLHTM
Trigger: CATTGTGTGGAGGGAAGATCATGGACAAATTAAGAT...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000681274.1
CDS-3UTR TCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGATCTTAATTTGTCCATaGTCTTCCCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRILICP*SSLHTM
Trigger: CATTGTGTGGAGGGAAGATCATGGACAAATTAAGAT...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000681274.1
CDS-3UTR TCA 90 bp CCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCCTGCCGTGGGTAGTTTaGGAACTTCCCGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: PQNRNRRPISVVTERNVSLPWVV*ELPEGI
Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAG...GCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACACTGCCGTGGGTAGTTTaGGAACTTCCCGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTLPWVV*ELPEGI
Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAG...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp ATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGCTGCCGTGGGTAGTTTaGGAACTTCCCGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: IFWVNGYHAPWRNQNSSKLPWVV*ELPEGI
Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAG...CTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp AATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: NMALWRRVGCVRPVLINRETGSG*LFCVTK
Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...CCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGETGSG*LFCVTK
Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp GAAATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACCTGCGGGGGAGGATCTaGCATAAGCGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: EIIIFWVNGYHAPWRNQNLRGRI*HKRVQE
Trigger: TTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAG...GTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTATGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGTGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp GAAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAATTCATCAAGCCGGTTTaGACTCTCAAGCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: EGYMQNTRWPAKAINIQKFIKPV*TLKHAP
Trigger: AGGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAA...TTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCATTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCATTGGCTTCCGGGCTCTaGGTTTGTACACTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: SFKNPFFTISSTTPSDQPLASGL*VCTLRN
Trigger: GTTCCTGAGTGTACAAACTCAGAGCCCGGAAGCCAA...TGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTTTGGCTTCCGGGCTCTaGGTTTGTACACTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSLASGL*VCTLRN
Trigger: GTTCCTGAGTGTACAAACTCAGAGCCCGGAAGCCAA...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTTGGCTTCCGGGCTCTaGGTTTGTACACTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTLASGL*VCTLRN
Trigger: GTTCCTGAGTGTACAAACTCAGAGCCCGGAAGCCAA...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCCTGATTAGAGTATCTTaGAAGAAAACAACCTCGAGT +
Preference number: 4 (lower is better)
Translates to: DFTFLPSSINMALWRRVGLIRVS*KKTTSS
Trigger: ACTCGAGGTTGTTTTCTTTCAAGATACTCTAATCAG...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCACTTCAGCTTTTCACTaGGTGCAAAAATCCCAACTC +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSTSAFH*VQKSQL
Trigger: GAGTTGGGATTTTTGCACTCAGTGAAAAGCTGAAGT...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGCTTTCTTGCTTATTCTaGATAAGGCCTTTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SPPPLIWRCGGGLAVLDQLSCLF*IRPFQR
Trigger: TCTCTGAAAAGGCCTTATTCAGAATAAGCAAGAAAG...CTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTTCTGCAGAGGGGGCATaGAGATGTCAGGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFSAEGA*RCQDLA
Trigger: AGCCAAGTCCTGACATCTTCATGCCCCCTCTGCAGA...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCCTCACTAATGCCAATTaGGCACTTTATCCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTLTNAN*ALYPQG
Trigger: GCCTTGGGGATAAAGTGCTCAATTGGCATTAGTGAG...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGCTCACTAATGCCAATTaGGCACTTTATCCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKLTNAN*ALYPQG
Trigger: GCCTTGGGGATAAAGTGCTCAATTGGCATTAGTGAG...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGCTCTGGAGAGATATATaGTTAAGTATGTCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: SPPPLIWRCGGGLAVLDQLWRDI*LSMSRD
Trigger: ATCCCTTGACATACTTAATCATATATCTCTCCAGAG...CTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGAGACATTTGTCAGGTaGGTTCTCTGGAGAGATATA +
Preference number: 4 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSETFVR*VLWRDI
Trigger: TATATCTCTCCAGAGAACTCACCTGACAAATGTCTC...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCGAGACATTTGTCAGGTaGGTTCTCTGGAGAGATATA +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSETFVR*VLWRDI
Trigger: TATATCTCTCCAGAGAACTCACCTGACAAATGTCTC...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAGCAGGATTTAAGTTCTaGGTTCAAGAACTACCTGGC +
Preference number: 4 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPAGFKF*VQELPG
Trigger: GCCAGGTAGTTCTTGAACTCAGAACTTAAATCCTGC...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCGGAGTTGGTTGGCAATaGAATAGCTATGACAACGGG +
Preference number: 4 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTGVGWQ*NSYDNG
Trigger: CCCGTTGTCATAGCTATTTCATTGCCAACCAACTCC...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAATGGACAGGACAAGTaGAACTTGCTGGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKNGQDK*NLLGLH
Trigger: GTGCAAACCCAGCAAGTTTCACTTGTCCTGTCCATT...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTCAGCACAACTCCCTCTaGCCAACCAAACTTACCCCA +
Preference number: 4 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTQHNSL*PTKLTP
Trigger: TGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTG...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGCAGCACAACTCCCTCTaGCCAACCAAACTTACCCCA +
Preference number: 4 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKQHNSL*PTKLTP
Trigger: TGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTG...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGCAGCACAACTCCCTCTaGCCAACCAAACTTACCCCA +
Preference number: 4 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKQHNSL*PTKLTP
Trigger: TGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTG...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACCAGCACAACTCCCTCTaGCCAACCAAACTTACCCCA +
Preference number: 4 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNQHNSL*PTKLTP
Trigger: TGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTG...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAATCAGTGCTAAATTATaGTGCAACAGTTTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLISAKL*CNSLAH
Trigger: ATGAGCCAAACTGTTGCATCATAATTTAGCACTGAT...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTATCAGTGCTAAATTATaGTGCAACAGTTTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: IWEHGVQRFTAGSTAQGLISAKL*CNSLAH
Trigger: ATGAGCCAAACTGTTGCATCATAATTTAGCACTGAT...AAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR TCA 90 bp GCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGCAAGGTTTCTCTCACAAAATTaGGCACATTTTGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: AAWEMAWKVSPREMAKARFLSQN*AHFGEP
Trigger: TGGCTCACCAAAATGTGCTCAATTTTGTGAGAGAAA...CCTTGCTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR TCA 90 bp AGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAACATAACAGAACTCTCTaGAATTCTAGGGAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: RTVEFSLVAPCVESNQGEHNRTL*NSRESY
Trigger: ATAGCTCTCCCTAGAATTTCAGAGAGTTCTGTTATG...TTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
CDS-3UTR TCA 90 bp TGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCCTTCTTTCAACAGACTaGCTCCACGTTGCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: CGGGLAVLDQCLLTGYQLLLSTD*LHVALG
Trigger: TCCTAAAGCAACGTGGAGTCAGTCTGTTGAAAGAAG...GAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR TCA 90 bp AAGTGTTGCAGATGCTGCTTGTCCGGGGAACACACTTTGAGAACTATTGTTCTACAAGGCAAGAGAAGGTaGGCTATTTTGCCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: KCCRCCLSGEHTLRTIVLQGKRR*AILPRW
Trigger: CCACCGAGGCAAAATAGCTCACCTTCTCTTGCCTTG...TAGAACAATAGTTCTCAAAGTGTGTTCCCCGGACAAGCAGCATCTGCAACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR TCA 90 bp TTCCCGCAATGCTTCTATGACATTCCATATGTCCACCAGGTGCAAATTGCATTTATGCGATCCAGATCTTaGGCCCTAGGCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: FPQCFYDIPYVHQVQIAFMRSRS*ALGSLL
Trigger: GAGCAAGGAGCCTAGGGCTCAAGATCTGGATCGCAT...AAATGCAATTTGCACCTGGTGGACATATGGAATGTCATAGAAGCATTGCGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS-3UTR TCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACCATTTGCGCATTGTCTaGAAGGATTCTAAATTAGGC +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYHLRIV*KDSKLG
Trigger: GCCTAATTTAGAATCCTTTCAGACAATGCGCAAATG...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679936.1
CDS-3UTR TCA 90 bp AGAACAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGATGTGAGCCAATTTCAGATGATAGTTaGTTTGGGCTCAGAGAAACA +
Preference number: 4 (lower is better)
Translates to: RTGCRSCWLQVWEARCEPISDDS*FGLRET
Trigger: TGTTTCTCTGAGCCCAAATCAACTATCATCTGAAAT...TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681065.1
CDS-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTCAGAGCGGGGTTCTaGAGGAGAGAGCAGCAACCT +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKLRAGF*RREQQP
Trigger: AGGTTGCTGCTCTCTCCTTCAGAACCCCGCTCTGAG...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680346.1
CDS-3UTR TCA 90 bp ACAAAGAAACAACATATGCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCTTCATATTGAGAATGTaGACAGACGAAGAGGACTCT +
Preference number: 4 (lower is better)
Translates to: TKKQHMPARSSQWWSATCFILRM*TDEEDS
Trigger: AGAGTCCTCTTCGTCTGTTCACATTCTCAATATGAA...GCACGTGGCACTCCACCACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681759.1
CDS-3UTR TCA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATGGAGCACTTCTCTGCTaGGGTGGCTGCTGTAAAATA +
Preference number: 4 (lower is better)
Translates to: LFPESHAVDFTFLPSSINGALLC*GGCCKI
Trigger: TATTTTACAGCAGCCACCTCAGCAGAGAAGTGCTCC...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681759.1
CDS-3UTR GCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTACGAAGAGGACTCTGCTaGCAGCCTTGCCGCATACCT +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLRRGLC*QPCRIP
Trigger: AGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCG...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp CTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAAACCGAAGAGGACTCTGCTaGCAGCCTTGCCGCATACCT +
Preference number: 4 (lower is better)
Translates to: LSALMEMDVQFIVEQERNRRGLC*QPCRIP
Trigger: AGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCG...GTTTCTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTAGACGAAGAGGACTCTaGTGCCAGCCTTGCCGCATA +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFRRRGL*CQPCRI
Trigger: TATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCT...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGAGACGAAGAGGACTCTaGTGCCAGCCTTGCCGCATA +
Preference number: 4 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKRRRGL*CQPCRI
Trigger: TATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCT...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAAGACGAAGAGGACTCTaGTGCCAGCCTTGCCGCATA +
Preference number: 4 (lower is better)
Translates to: GNAATKGCWIYKIYLRLTRRRGL*CQPCRI
Trigger: TATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCT...TGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAAGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: LSSKDSGVLTCGSLRGIEAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...TTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGGTGGGGTTTTGCTGTaGCTTCTCTGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIGGVLL*LLWRGL
Trigger: CAGCCCACGCCAGAGAAGGCACAGCAAAACCCCACC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGGTGGGGTTTTGCTGTaGCTTCTCTGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRGGVLL*LLWRGL
Trigger: CAGCCCACGCCAGAGAAGGCACAGCAAAACCCCACC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATGGTGGGGTTTTGCTGTaGCTTCTCTGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDGGVLL*LLWRGL
Trigger: CAGCCCACGCCAGAGAAGGCACAGCAAAACCCCACC...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGAGGAGCCGGAGTTCTaGCAGCAGGGTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIEEPEF*QQGGVL
Trigger: CAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGAGGAGCCGGAGTTCTaGCAGCAGGGTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLREEPEF*QQGGVL
Trigger: CAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTTCGGGCATGGATTTaGGCTAGAAAAGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLFRAWI*ARKAFS
Trigger: TGAAAAGGCTTTTCTAGCGCAAATCCATGCCCGAAA...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCATTTCGGGCATGGATTTaGGCTAGAAAAGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSFRAWI*ARKAFS
Trigger: TGAAAAGGCTTTTCTAGCGCAAATCCATGCCCGAAA...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTGCACATAGGGATCTaGATCCTCCGTAACCATGTC +
Preference number: 4 (lower is better)
Translates to: VESNQGECSNQRLLDLQDLHIGI*ILRNHV
Trigger: GACATGGTTACGGAGGATGCAGATCCCTATGTGCAG...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCTGCACATAGGGATCTaGATCCTCCGTAACCATGTC +
Preference number: 4 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFLHIGI*ILRNHV
Trigger: GACATGGTTACGGAGGATGCAGATCCCTATGTGCAG...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTGCACATAGGGATCTaGATCCTCCGTAACCATGTC +
Preference number: 4 (lower is better)
Translates to: PFFTISSTTPSDQPNLPQLHIGI*ILRNHV
Trigger: GACATGGTTACGGAGGATGCAGATCCCTATGTGCAG...TTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AGAGTCCTTGCAATGGCTTTATATGACGATATCAACAACCATGTGATGGAGTTGAGGCTGCTGCCAGGCTaGTGTCTTCCTCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RVLAMALYDDINNHVMELRLLPG*CLPPLC
Trigger: ACACAGAGGAGGAAGACAGCAGCCTGGCAGCAGCCT...CAACTCCATCACATGGTTGTTGATATCGTCATATAAAGCCATTGCAAGGACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAAGTGCCGGGTCCGCTaGCAGAGTTGTGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLKCRVR*QSCGSC
Trigger: ACATGACCCACAACTCTGGCAGCGGACCCGGCACTT...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598774.6
CDS-3UTR GCA 90 bp TGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: CGGGLAVLDQCLLTGYQLLSPHL*KQLSSF
Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...GAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp TTTTCCCGCAATGCTTCTATGACATTCCATATGTCCACCAGGTGCAAATTGCATAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: FSRNASMTFHMSTRCKLHRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...ATGCAATTTGCACCTGGTGGACATATGGAATGTCATAGAAGCATTGCGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS-3UTR GCA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTAAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: PCVESNQGECSNQRLLDLKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTGCTTAATGCATTAGTCAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: CKGSRLEAQLRDLLNALVKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...GACTAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR GCA 90 bp ATCCTGCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGCCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: ILLPGKWPGKYPQGKWLKPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...CTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGTTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp CCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTATTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: PLIWRCGGGLAVLDQCLLFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...TAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp AGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: RRVGCVRPVLINRLSALMTFASR*RRGNQT
Trigger: GGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGT...CATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp GGGCCCTCTAAAGAGGGTCCTTGGAAAAGACTATCCCAGTCTTTTATCCTCTTGACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: GPSKEGPWKRLSQSFILLTFASR*RRGNQT
Trigger: GGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGT...CAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR GCA 90 bp ACAAAGAAACAACATATGCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCCAGCTTTTCACTGAGTaGAAAAATCCCAACTCAACT +
Preference number: 4 (lower is better)
Translates to: TKKQHMPARSSQWWSATCQLFTE*KNPNST
Trigger: AGTTGAGTTGGGATTTTTGCACTCAGTGAAAAGCTG...GCACGTGGCACTCCACCACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAAGAACTGTGCAGTTGTaGCACTTTGGTGTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTRTVQL*HFGVSL
Trigger: CAGGCTGACACCAAAGTGGCACAACTGCACAGTTCT...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTTGCTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGCAAAGAAACAACATATaGCAGCTCGGTCCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: LAGFALRTGPKSKSGEPRQRNNI*QLGPVS
Trigger: ACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTG...CCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTGCTGTGTTAGACCAGTaGTTATTAACAGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPAVLDQ*LLTGYQ
Trigger: CTGATAGCCTGTTAATAAGCACTGGTCTAACACAGC...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAAGCAGCAACCAAAGGTTaGTGGATTTACAAGATCTAT +
Preference number: 4 (lower is better)
Translates to: RTVEFSLVAPCVESNQGEAATKG*WIYKIY
Trigger: ATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC...TTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGTCACTTGTGGCTCCTTaGGTGGAATCGAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKSLVAP*VESNQG
Trigger: CCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGA...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AAGTGTTGCAGATGCTGCTTGTCCGGGGAACACACTTTGAGAACTATTGTTCTATCACTTGTGGCTCCTTaGGTGGAATCGAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: KCCRCCLSGEHTLRTIVLSLVAP*VESNQG
Trigger: CCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGA...TAGAACAATAGTTCTCAAAGTGTGTTCCCCGGACAAGCAGCATCTGCAACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACCTGTTAGTTAAGACCTaGAGTAGGGGACATAACTTA +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYLLVKT*SRGHNL
Trigger: TAAGTTATGTCCCCTACTGCAGGTCTTAACTAACAG...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGTTTGCTGCTCCCCCTaGTGGCTCTTGAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRVCCSP*WLLSLT
Trigger: GGTCAGGCTCAAGAGCCAGCAGGGGGAGCAGCAAAC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR GCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTCACAGTTTGGCTCTGTaGATCCATCTGTTTACGAAC +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFHSLAL*IHLFTN
Trigger: GTTCGTAAACAGATGGATGCACAGAGCCAAACTGTG...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp AGTTGTGCCACTTTGGTGTCAGCCTGTGCTCAGAGACATTTGTCAGGTGAGTTCGAAGGTGAGCTATTTTaGCTCGGTGGCTCAATATTC +
Preference number: 4 (lower is better)
Translates to: SCATLVSACAQRHLSGEFEGELF*LGGSIF
Trigger: GAATATTGAGCCACCGAGGCAAAATAGCTCACCTTC...GAACTCACCTGACAAATGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR GCA 90 bp AGAGTGGGAGAACAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGATTGTTGGATTTGTAACTaGACAAAGGTCACAATTCCA +
Preference number: 4 (lower is better)
Translates to: RVGEQGVVHAGYRSGRHDCWICN*TKVTIP
Trigger: TGGAATTGTGACCTTTGTGCAGTTACAAATCCAACA...ATCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTGTTCTCCCACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR GCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACGTTCATGATGGCATTTaGGCATTGTCTGAAAGGATT +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYVHDGI*ALSERI
Trigger: AATCCTTTCAGACAATGCGCAAATGCCATCATGAAC...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679936.1
CDS-3UTR CCA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: PVLINRLSALMEMDVQFIADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTACTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTTGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GCAIHCGTRKKQPPQDVVCWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...AACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATGCCTTGCCGCATACCTaGCAATTAGCCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: VESNQGECSNQRLLDLQDALPHT*QLACVL
Trigger: AAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGC...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGCCTTGCCGCATACCTaGCAATTAGCCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTALPHT*QLACVL
Trigger: AAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGC...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ATCCTGCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGTCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: ILLPGKWPGKYPQGKWLKSSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...CTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLSSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTAGTGCCTTCTCTGGCGTaGGCTGAGAAGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLVPSLA*AEKLVH
Trigger: ATGAACAAGCTTCTCAGCCCACGCCAGAGAAGGCAC...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKMRPSN*TISSLR
Trigger: CCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCAT...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSMRPSN*TISSLR
Trigger: CCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCAT...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCGATGGGCATGGGAATTaGCCTGCTGATGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVDGHGN*PADGVA
Trigger: AGCCACACCATCAGCAGGCCAATTCCCATGCCCATC...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACTGACGCTGACCGGATaGGCATGGGAATTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVILTLTG*AWELAC
Trigger: GCAGGCCAATTCCCATGCCCATCCGGTCAGCGTCAG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAAAGGTATTCCTCCATCTaGAGCTCATTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PFFTISSTTPSDQPNLPQRYSSI*SSFSSC
Trigger: GCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCT...TTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAGAGTTGTGGGTCATGTaGGCACAGCAGAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLELWVM*AQQRLA
Trigger: AGCCAGCCTCTGCTGTGCCCACATGACCCACAACTC...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598774.6
CDS-3UTR CCA 90 bp TTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA +
Preference number: 4 (lower is better)
Translates to: FWVNGYHAPWRNQNSSKYMLFCR*RVGCDP
Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...ATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CCA 90 bp CCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA +
Preference number: 4 (lower is better)
Translates to: PQNRNRRPISVVTERNVSMLFCR*RVGCDP
Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...GCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CCA 90 bp GAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: EQHPQNRNRRPISVVTERDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...TCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CCA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTGRNRI*LTVLCN
Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACGAACACTCAACCGGATaGAAGACATTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYEHSTG*KTFSTF
Trigger: AAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTC...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000681274.1
CDS-3UTR CCA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCGCCAAGGACCCTTCTTaGCTTCCGGGCTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVAKDPS*LPGSEF
Trigger: AAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGC...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGCTGCTCACAGAGACTTaGAGTCAACTACAGACCGTG +
Preference number: 4 (lower is better)
Translates to: TKGNAATKGCWIYKIYLRLLTET*SQLQTV
Trigger: CACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAG...CCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCAGAGGCCCCAAAGAATaGATTATTCCTGGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSRGPKE*IIPGVF
Trigger: AAACACACCAGGAATAATCCATTCTTTGGGGCCTCT...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCAGAGGCCCCAAAGAATaGATTATTCCTGGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGIRGPKE*IIPGVF
Trigger: AAACACACCAGGAATAATCCATTCTTTGGGGCCTCT...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTCGTTTGGGGATCTTATaGCACCTGTGGTTTATAAAC +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPRLGIL*HLWFIN
Trigger: GTTTATAAACCACAGGTGCCATAAGATCCCCAAACG...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCATACCAACTACGAACTTaGTGTGTGGGTTCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPYQLRT*CVGSEK
Trigger: CTTCTCTGAACCCACACACCAAGTTCGTAGTTGGTA...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGTTAGTCAGAAATTaGTCATTGGCGGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: ESHAVDFTFLPSSINMALWLVRN*SLAAVS
Trigger: GGAAACTGCCGCCAATGACCAATTTCTGACTAACCA...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAAAAGAGAGAGAAAAGGTaGCTGGTTAGTCAGAAATTG +
Preference number: 4 (lower is better)
Translates to: RTVEFSLVAPCVESNQGEKREKR*LVSQKL
Trigger: CAATTTCTGACTAACCAGCCACCTTTTCTCTCTCTT...TTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGATTAATATGGCGCTGTaGAGGAGGGTTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: RRVGCVRPVLINRLSALMINMAL*RRVGCV
Trigger: AACACAGCCAACCCTCCTCCACAGCGCCATATTAAT...CATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACCCTCCTCCATTAATATaGCGCTGTGGAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: FKNPFFTISSTTPSDQPNPPPLI*RCGGGL
Trigger: CAACCCTCCTCCACAGCGCCATATTAATGGAGGAGG...GTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGCCTCCTCCATTAATATaGCGCTGTGGAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKPPPLI*RCGGGL
Trigger: CAACCCTCCTCCACAGCGCCATATTAATGGAGGAGG...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGAGTGGGAGAACAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGATGCAACCAAAGGTTGCTaGATTTACAAGATCTATCTA +
Preference number: 4 (lower is better)
Translates to: RVGEQGVVHAGYRSGRHDATKGC*IYKIYL
Trigger: TAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC...ATCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTGTTCTCCCACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CCA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATTTGTGGCTCCTTGCGTaGAATCGAACCAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: VESNQGECSNQRLLDLQDLWLLA*NRTKGN
Trigger: ATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTGGAGTTCTCACTTGTaGCTCCTTGCGTGGAATCGA +
Preference number: 4 (lower is better)
Translates to: TKGNAATKGCWIYKIYLRWSSHL*LLAWNR
Trigger: TCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCA...CCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCTTTGGGTACCATGCACCCTaGAGGAACCAGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: QNRNRRPISVVTERNVSFGYHAP*RNQNSS
Trigger: TGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCC...AAAGCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CCA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGGAAGAGCCAAAAAGATaGGACGTGAATAGTCAGTTA +
Preference number: 4 (lower is better)
Translates to: KVCNDPLVSRSRKALVLREEPKR*DVNSQL
Trigger: TAACTGACTATTCACGTCCCATCTTTTTGGCTCTTC...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCCGCAGTACCCGCTGTTaGCCCCCTGAGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFRSTRC*PPEMQK
Trigger: CTTCTGCATCTCAGGGGGCCAACAGCGGGTACTGCG...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGACATCTGGGTGACGTaGGCCCTGGTCCTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRDIWVT*ALVLGY
Trigger: GTACCCAAGGACCAGGGCCCACGTCACCCAGATGTC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp ATTTTACCATGGCCTTCCGGATCAAACGCTGCAAGCAGGAAGTTAAGGAGGAGGGGCTCCTTGCTCTGTTaGATTTGTAACTGCACAAAG +
Preference number: 4 (lower is better)
Translates to: ILPWPSGSNAASRKLRRRGSLLC*ICNCTK
Trigger: CTTTGTGCAGTTACAAATCCAACAGAGCAAGGAGCC...CCTCCTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAAGGCCATGGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGGGAGGAAGGGGGACTaGATACTAGACCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIGRKGD*ILDLGW
Trigger: CCATCCCAGGTCTAGTATTCAGTCCCCCTTCCTCCC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269192.11
ENST00000556414.7
ENST00000591182.5
CDS-3UTR TCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGGGAGGAAGGGGGACTaGATACTAGACCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRGRKGD*ILDLGW
Trigger: CCATCCCAGGTCTAGTATTCAGTCCCCCTTCCTCCC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597674.5
ENST00000679678.1
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVILGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: NPFFTISSTTPSDQPNLPYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...GGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGTTCTCTGGCGTGGGCTaGGAAGCTTGTTCATGCTCT +
Preference number: 4 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKFSGVG*EACSCS
Trigger: AGAGCATGAACAAGCTTCTCAGCCCACGCCAGAGAA...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AAAGAAAACAACCTCGAGTTGGAAAGAGGCCCCAAAGAATGGATTATTCCTGGTTTCTCTGGCGTGGGCTaGGAAGCTTGTTCATGCTCT +
Preference number: 4 (lower is better)
Translates to: KENNLELERGPKEWIIPGFSGVG*EACSCS
Trigger: AGAGCATGAACAAGCTTCTCAGCCCACGCCAGAGAA...ACCAGGAATAATCCATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAATCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCA +
Preference number: 4 (lower is better)
Translates to: PFFTISSTTPSDQPNLPQSLVAS*DPPTGP
Trigger: TGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGA...TTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GGATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTGGTAGCTCCACTGTaGATGTACCCAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: GCAIHCGTRKKQPPQDVVVVAPL*MYPGFR
Trigger: CCGAAAACCTGGGTACATTCACAGTGGAGCTACCAC...AACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATGTGGTAGCTCCACTGTaGATGTACCCAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: NRTKGNAATKGCWIYKIYVVAPL*MYPGFR
Trigger: CCGAAAACCTGGGTACATTCACAGTGGAGCTACCAC...ATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGCCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TKGNAATKGCWIYKIYLRPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...CCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTCTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFLSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR TCA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTTCCACATGGATTTGGTaGGTGGTTGGCATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSSTWIW*VVGIRL
Trigger: CAAACGGATGCCAACCACTCACCAAATCCATGTGGA...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGTCCACATGGATTTGGTaGGTGGTTGGCATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKSTWIW*VVGIRL
Trigger: CAAACGGATGCCAACCACTCACCAAATCCATGTGGA...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTATCTTAATTTGTCCATaGTCTTCCCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPILICP*SSLHTM
Trigger: CATTGTGTGGAGGGAAGATCATGGACAAATTAAGAT...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp AGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: RRVGCVRPVLINRLSALMETGSG*LFCVTK
Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...CATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTGCGGGGGAGGATCTaGCATAAGCGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKLRGRI*HKRVQE
Trigger: TTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAG...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp GGTGATTTAGGAATTGCACCTTTCTTCTCTGCACCACGATTTCAGATGATAGTTCTGCGGGGGAGGATCTaGCATAAGCGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: GDLGIAPFFSAPRFQMIVLRGRI*HKRVQE
Trigger: TTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAG...AACTATCATCTGAAATCGTGGTGCAGAGAAGAAAGGTGCAATTCCTAAATCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681065.1
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
CDS-3UTR TCA 90 bp ACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTCATCAAGCCGGTTTaGACTCTCAAGCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: TKGNAATKGCWIYKIYLRFIKPV*TLKHAP
Trigger: AGGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAA...CCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAATTCATCAAGCCGGTTTaGACTCTCAAGCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: PFFTISSTTPSDQPNLPQFIKPV*TLKHAP
Trigger: AGGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAA...TTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTTGGCTTCCGGGCTCTaGGTTTGTACACTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNLASGL*VCTLRN
Trigger: GTTCCTGAGTGTACAAACTCAGAGCCCGGAAGCCAA...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAACTGATTAGAGTATCTTaGAAGAAAACAACCTCGAGT +
Preference number: 4 (lower is better)
Translates to: RTVEFSLVAPCVESNQGELIRVS*KKTTSS
Trigger: ACTCGAGGTTGTTTTCTTTCAAGATACTCTAATCAG...TTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGACTTCAGCTTTTCACTaGGTGCAAAAATCCCAACTC +
Preference number: 4 (lower is better)
Translates to: WRRVGCVRPVLINRLSALTSAFH*VQKSQL
Trigger: GAGTTGGGATTTTTGCACTCAGTGAAAAGCTGAAGT...CAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCTATCCCCAAGGCAAGTaGTTTGGTTTCAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFYPQGK*FGFKGQ
Trigger: CTGCCCTTTGAAACCAAATCACTTGCCTTGGGGATA...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAACTCTGGAGAGATATATaGTTAAGTATGTCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: RTVEFSLVAPCVESNQGELWRDI*LSMSRD
Trigger: ATCCCTTGACATACTTAATCATATATCTCTCCAGAG...TTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATCTGTGCAAAGAAATCTaGGAACTGTGCAGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LFPESHAVDFTFLPSSINLCKEI*ELCSCA
Trigger: GGCACAACTGCACAGTTCTCAGATTTCTTTGCACAG...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGGCAGTGGAAAAGAGATaGACATTAAGACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: RVGCVRPVLINRLSALMEAVEKR*TLRHPN
Trigger: GTTGGGGTGTCTTAATGTTCATCTCTTTTCCACTGC...CTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATAATGGACAGGACAAGTaGAACTTGCTGGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: VESNQGECSNQRLLDLQDNGQDK*NLLGLH
Trigger: GTGCAAACCCAGCAAGTTTCACTTGTCCTGTCCATT...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTACCACAACTGTTTCCTaGATCCCATGCAGTAGATTT +
Preference number: 4 (lower is better)
Translates to: PLTNQTYPNFRPDQPQLFTTTVS*IPCSRF
Trigger: AAATCTACTGCATGGGATTCAGGAAACAGTTGTGGT...AAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCTTGCAGCTTCTGTTTCAGGTATTCCTCCATCTGGAGCTCATTCTCCAGCTGCACCACAACTGTTTCCTaGATCCCATGCAGTAGATTT +
Preference number: 4 (lower is better)
Translates to: SCSFCFRYSSIWSSFSSCTTTVS*IPCSRF
Trigger: AAATCTACTGCATGGGATTCAGGAAACAGTTGTGGT...GCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCTGAAACAGAAGCTGCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR TCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGACCACAACTGTTTCCTaGATCCCATGCAGTAGATTT +
Preference number: 4 (lower is better)
Translates to: ESHAVDFTFLPSSINMALTTTVS*IPCSRF
Trigger: AAATCTACTGCATGGGATTCAGGAAACAGTTGTGGT...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGACCACAACTGTTTCCTaGATCCCATGCAGTAGATTT +
Preference number: 4 (lower is better)
Translates to: NMALWRRVGCVRPVLINRTTTVS*IPCSRF
Trigger: AAATCTACTGCATGGGATTCAGGAAACAGTTGTGGT...CCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTCCCCAACTTCCGTCCTaGCCAACCACAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: MCNSLWNKKETTPARCSCPQLPS*PTTTVS
Trigger: GGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGG...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCATCAGTGCTAAATTATaGTGCAACAGTTTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCISAKL*CNSLAH
Trigger: ATGAGCCAAACTGTTGCATCATAATTTAGCACTGAT...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTATCAGTGCTAAATTATaGTGCAACAGTTTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVAISAKL*CNSLAH
Trigger: ATGAGCCAAACTGTTGCATCATAATTTAGCACTGAT...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTACAGACCATGGGAATaGAGGGTAAAAATGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFYRPWE*RVKMCP
Trigger: TGGACACATTTTTACCCTTCATTCCCATGGTCTGTA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS-3UTR TCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAAGATGCAGAAGCTGCTaGGGGGCTTGGTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRRCRSC*GAWWRG
Trigger: TCCTCTCCACCAAGCCCCTCAGCAGCTTCTGCATCT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR TCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGTTCATCAAGCCGGTTTaGACTCTCAAGCATGCGTGC +
Preference number: 4 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKFIKPV*TLKHAC
Trigger: GCACGCATGCTTGAGAGTTCAAACCGGCTTGATGAA...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000680822.1
CDS-3UTR TCA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGGTCTGGTCTCAGTGCTaGCGTGGAGCTGATAAGCTT +
Preference number: 4 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKVWSQC*RGADKL
Trigger: AAGCTTATCAGCTCCACGTCAGCACTGAGACCAGAC...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598334.5
CDS-3UTR GCA 90 bp GAAATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: EIIIFWVNGYHAPWRNQNTGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...GTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR GCA 90 bp CCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTATGTACTGTATCCCTTTaGCCTTCAGAAAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PLIWRCGGGLAVLDQCLLCTVSL*PSEKLE
Trigger: CTCCAGCTTTTCTGAAGGGCAAAGGGATACAGTACA...TAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679796.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACGAAGAGGACTCTGCTaGCAGCCTTGCCGCATACCT +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIRRGLC*QPCRIP
Trigger: AGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGACGAAGAGGACTCTGCTaGCAGCCTTGCCGCATACCT +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRRRGLC*QPCRIP
Trigger: AGGTATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCG...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGAGACGAAGAGGACTCTaGTGCCAGCCTTGCCGCATA +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKRRRGL*CQPCRI
Trigger: TATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGACGAAGAGGACTCTaGTGCCAGCCTTGCCGCATA +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLRRRGL*CQPCRI
Trigger: TATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCT...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFISCLC*LFASMV
Trigger: CACCATCGATGCGAATAAGCAGCAAAGGCAGCTGAT...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: LFPESHAVDFTFLPSSINISCLC*LFASMV
Trigger: CACCATCGATGCGAATAAGCAGCAAAGGCAGCTGAT...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: VESNQGECSNQRLLDLQDAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATAGCTCAGCAATCAGCTaGCTTTGCTGCTTATTCGCA +
Preference number: 4 (lower is better)
Translates to: LFPESHAVDFTFLPSSINSSAIS*LCCLFA
Trigger: TGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCT...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGGTGGGGTTTTGCTGTaGCTTCTCTGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAGGVLL*LLWRGL
Trigger: CAGCCCACGCCAGAGAAGGCACAGCAAAACCCCACC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGTGGGGTTTTGCTGTaGCTTCTCTGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: IHCGTRKKQPPQDVVVSNGGVLL*LLWRGL
Trigger: CAGCCCACGCCAGAGAAGGCACAGCAAAACCCCACC...ATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGAGGAGCCGGAGTTCTaGCAGCAGGGTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAEEPEF*QQGGVL
Trigger: CAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTCTCAAACTGAGTCCGTaGAAATTCAGAATCCACATT +
Preference number: 4 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVLKLSP*KFRIHI
Trigger: AATGTGGATTCTGAATTTGCACGGACTCAGTTTGAG...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCCTCAAACTGAGTCCGTaGAAATTCAGAATCCACATT +
Preference number: 4 (lower is better)
Translates to: TISSTTPSDQPNLPQLPSLKLSP*KFRIHI
Trigger: AATGTGGATTCTGAATTTGCACGGACTCAGTTTGAG...GGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATTTCGGGCATGGATTTaGGCTAGAAAAGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: MPFLLRTVEFSLVAPCVEFRAWI*ARKAFS
Trigger: TGAAAAGGCTTTTCTAGCGCAAATCCATGCCCGAAA...TTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCAGCTCATTCTCCAGCTaGCGGACAGAGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFSSFSS*RTESFS
Trigger: TGAAAATGACTCTGTCCGGCAGCTGGAGAATGAGCT...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAAGGCTGCTGCCAGGCTaGTGTCTTCCTCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIRLLPG*CLPPLC
Trigger: ACACAGAGGAGGAAGACAGCAGCCTGGCAGCAGCCT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTACAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp ACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCCAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: TISSTTPSDQPNLPQLPSQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...GGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCTTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTLSPHL*KQLSSF
Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp CTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAAACAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LSALMEMDVQFIVEQERNRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...GTTTCTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp AGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RRVGCVRPVLINRLSALMKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...CATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp GCAATCAGCTGCCTTTGCTGCTTATTCGCATCGATGGTGAAAGAGATGTCAGGAAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: AISCLCCLFASMVKEMSGKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...TCCTGACATCTCTTTCACCATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR GCA 90 bp TGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCCCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: CGGGLAVLDQCLLTGYQLPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...GAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp CTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAACCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: LLRTVEFSLVAPCVESNQPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...TTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp TGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATTTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: WVNGYHAPWRNQNSSKYYFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...ATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR GCA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACATTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp ACAGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: TALLNSTLKTETVGQSLWTFASR*RRGNQT
Trigger: GGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGT...CCACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR GCA 90 bp ATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: IFWVNGYHAPWRNQNSSKTFASR*RRGNQT
Trigger: GGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGT...CTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR GCA 90 bp CCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAATCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: PFFTISSTTPSDQPNLPQSFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...TTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp ACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: TKGNAATKGCWIYKIYLRSFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...CCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCTCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFSFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGCAGTCAGTGGTGGAGTaGCACGTGCAGGATTTAAGT +
Preference number: 4 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKQSVVE*HVQDLS
Trigger: ACTTAAATCCTGCACGTGGCACTCCACCACTGACTG...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTGCTTAATGCATTAGTCGCTGTGTTAGACCAGTaGTTATTAACAGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: CKGSRLEAQLRDLLNALVAVLDQ*LLTGYQ
Trigger: CTGATAGCCTGTTAATAAGCACTGGTCTAACACAGC...GACTAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR GCA 90 bp TGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCGCTGTGTTAGACCAGTaGTTATTAACAGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: CGGGLAVLDQCLLTGYQLAVLDQ*LLTGYQ
Trigger: CTGATAGCCTGTTAATAAGCACTGGTCTAACACAGC...GAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTAGCAGCAACCAAAGGTTaGTGGATTTACAAGATCTAT +
Preference number: 4 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLAATKG*WIYKIY
Trigger: ATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAAGAATACATGGCTAGATaGAGAGGATTCAAAGAATTG +
Preference number: 4 (lower is better)
Translates to: RTVEFSLVAPCVESNQGEEYMAR*RGFKEL
Trigger: CAATTCTTTGAATCCTCTGCATCTAGCCATGTATTC...TTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR GCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAACTCAGGTTTCATCTCTaGAAACAGCTGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKLRFHL*KQLSSF
Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAAACCTGAG...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681274.1
CDS-3UTR GCA 90 bp ATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTAACCCTTTTCAATCATaGCATTTTCCACATTTGCTA +
Preference number: 4 (lower is better)
Translates to: IWEHGVQRFTAGSTAQGLNPFQS*HFPHLL
Trigger: TAGCAAATGTGGAAAATGGCATGATTGAAAAGGGTT...AAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681065.1
CDS-3UTR CCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp GGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATAGGAATATTTCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GTMHPGGTRTAQSIIGIFLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...AAATATTCCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CCA 90 bp GAAATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: EIIIFWVNGYHAPWRNQNLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...GTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CCA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATAGGAATATTTGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: GTMHPGGTRTAQSIIGIFVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...AAATATTCCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AAAAGGGAAATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACTGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: KREIIIFWVNGYHAPWRNCWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...GTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTATTTCCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CCA 90 bp CTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACTGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LDLQDLSTVNSQELIRVDCWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...GTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGTGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKCWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp CTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAAACCTACTTCACTGTCCTTaGGAGGAGAGCGTGCACCGT +
Preference number: 4 (lower is better)
Translates to: LSALMEMDVQFIVEQERNLLHCP*EESVHR
Trigger: ACGGTGCACGCTCTCCTCCCAAGGACAGTGAAGTAG...GTTTCTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679796.1
CDS-3UTR CCA 90 bp TTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACGCCTTGCCGCATACCTaGCAATTAGCCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: FKNPFFTISSTTPSDQPNALPHT*QLACVL
Trigger: AAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGC...GTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACGCCTTGCCGCATACCTaGCAATTAGCCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNALPHT*QLACVL
Trigger: AAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGC...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGTCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: WRRVGCVRPVLINRLSALSSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...CAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFSSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCTCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFMRPSN*TISSLR
Trigger: CCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCAT...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: GNAATKGCWIYKIYLRLTMRPSN*TISSLR
Trigger: CCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCAT...TGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTCTGACGCTGACCGGATaGGCATGGGAATTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLALTLTG*AWELAC
Trigger: GCAGGCCAATTCCCATGCCCATCCGGTCAGCGTCAG...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGCCAGGTTTTCGGGCATaGATTTGCGCTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKPGFRA*ICARKA
Trigger: GGCTTTTCTAGCGCAAATCCATGCCCGAAAACCTGG...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACAGGTATTCCTCCATCTaGAGCTCATTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FKNPFFTISSTTPSDQPNRYSSI*SSFSSC
Trigger: GCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCT...GTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAAGCTGCTGGGTGTGGTaGTTCCTCTCTTCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVISCWVW*FLSSVR
Trigger: CCTCACCGAAGAGAGGAACCACCACACCCAGCAGCT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGAGTCCTTGCAATGGCTTTATATGACGATATCAACAACCATGTGATGGAGTTGTCTGTCAGGAGCTGCTaGGTGTGGTGGTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RVLAMALYDDINNHVMELSVRSC*VWWFLS
Trigger: AGAGAGGAACCACCACACCCAGCAGCTCCTGACAGA...CAACTCCATCACATGGTTGTTGATATCGTCATATAAAGCCATTGCAAGGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATAGGTTAGAAGGTGTCCATTaGTCTGCAGGGAGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: VNGYHAPWRNQNSSKYYRLEGVH*SAGRFE
Trigger: CTCAAACCTCCCTGCAGACCAATGGACACCTTCTAA...CCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315456.10
CDS-3UTR CCA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTAATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA +
Preference number: 4 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLMLFCR*RVGCDP
Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp CACAGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: HSFIEQHPQNRNRRPISVDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...CACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAACTGAAATTTTACCATaGCCTTCCGGATCAAACGCT +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKTEILP*PSGSNA
Trigger: AGCGTTTGATCCGGAAGGCCATGGTAAAATTTCAGT...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000681274.1
CDS-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTAAACCATCACCCCACTaGAGTCAGAAATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFKPSPH*SQKSLR
Trigger: TCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAAAAACCATCACCCCACTaGAGTCAGAAATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: MPFLLRTVEFSLVAPCVEKPSPH*SQKSLR
Trigger: TCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTT...TTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp TGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGAAACCATCACCCCACTaGAGTCAGAAATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: WRRVGCVRPVLINRLSALKPSPH*SQKSLR
Trigger: TCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTT...CAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCATCTTATGGCACCTGTaGTTTATAAACAGCTTTAGT +
Preference number: 4 (lower is better)
Translates to: DFTFLPSSINMALWRRVGILWHL*FINSFS
Trigger: ACTAAAGCTGTTTATAAACCACAGGTGCCATAAGAT...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTGAAGATGTCAGGACTTaGCTGGGCACCTACCAACTA +
Preference number: 4 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTEDVRT*LGTYQL
Trigger: TAGTTGGTAGGTGCCCAGCCAAGTCCTGACATCTTC...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCGCAGTTGTGCCACTTTaGTGTCAGCCTGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVAVVPL*CQPVLR
Trigger: TCTGAGCACAGGCTGACACCAAAGTGGCACAACTGC...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCATTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCACCATCTAGAGAGGTATaGGTTCACAGAGGATGGGCA +
Preference number: 4 (lower is better)
Translates to: SFKNPFFTISSTTPSDQPPSREV*VHRGWA
Trigger: TGCCCATCCTCTGTGAACCCATACCTCTCTAGATGG...TGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACAGTATGAGGCACCAGTaGCCACCTGCTCCATCTAGA +
Preference number: 4 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNSMRHQ*PPAPSR
Trigger: TCTAGATGGAGCAGGTGGCCACTGGTGCCTCATACT...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATAGTATGAGGCACCAGTaGCCACCTGCTCCATCTAGA +
Preference number: 4 (lower is better)
Translates to: NRTKGNAATKGCWIYKIYSMRHQ*PPAPSR
Trigger: TCTAGATGGAGCAGGTGGCCACTGGTGCCTCATACT...ATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATTCAGAAATTGGTCATTaGCGGCAGTTTCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: VESNQGECSNQRLLDLQDSEIGH*RQFPES
Trigger: GGACTCTGGAAACTGCCGCCAATGACCAATTTCTGA...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCGAGAGAAAAGGTGGCTaGTTAGTCAGAAATTGGTCA +
Preference number: 4 (lower is better)
Translates to: CGGGLAVLDQCLLTGYQLERKGG*LVRNWS
Trigger: TGACCAATTTCTGACTAACCAGCCACCTTTTCTCTC...GAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAGAGAGAAAAGGTGGCTaGTTAGTCAGAAATTGGTCA +
Preference number: 4 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPERKGG*LVRNWS
Trigger: TGACCAATTTCTGACTAACCAGCCACCTTTTCTCTC...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAAGCAACCAAAGGTTGCTaGATTTACAAGATCTATCTA +
Preference number: 4 (lower is better)
Translates to: RTVEFSLVAPCVESNQGEATKGC*IYKIYL
Trigger: TAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC...TTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGCAACCAAAGGTTGCTaGATTTACAAGATCTATCTA +
Preference number: 4 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVAATKGC*IYKIYL
Trigger: TAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACTTGTGGCTCCTTGCGTaGAATCGAACCAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNLWLLA*NRTKGN
Trigger: ATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTTGTGGCTCCTTGCGTaGAATCGAACCAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTLWLLA*NRTKGN
Trigger: ATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGTTGTGGCTCCTTGCGTaGAATCGAACCAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKLWLLA*NRTKGN
Trigger: ATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACTGGAGTTCTCACTTGTaGCTCCTTGCGTGGAATCGA +
Preference number: 4 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNWSSHL*LLAWNR
Trigger: TCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCA...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGTGGAGTTCTCACTTGTaGCTCCTTGCGTGGAATCGA +
Preference number: 4 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKWSSHL*LLAWNR
Trigger: TCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCA...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACGTGAATAGTCAGTTATaGAGTACAGTCTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYVNSQL*STVFLS
Trigger: TGAGAGAAAGACTGTACTCCATAACTGACTATTCAC...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAGCACAATTTGTTGTGTaGGGGTGTTCTAAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKAQFVV*GCSKFG
Trigger: ACCAAACTTAGAACACCCCCACACAACAAATTGTGC...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATTCCTTCCTCCCACCATaGTACATTAATCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LFPESHAVDFTFLPSSINSFLPP*YINQPV
Trigger: CACTGGCTGATTAATGTACCATGGTGGGAGGAAGGA...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681241.1
CDS-3UTR CCA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACCACAGTACATTAAAATaGACAGATGAGCAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYHSTLK*TDEQLR
Trigger: TCTCAACTGCTCATCTGTCCATTTTAATGTACTGTG...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679936.1
3UTR CAA 72 bp GAGAGAAAAGGTGGCTGGTTAGTCAGAAATTGGTCATaGGCGGCAGTTTCCAGAGTCCTTGCAATGGCTTTA +
Preference number: 4 (lower is better)
Translates to: ERKGGWLVRNWS*AAVSRVLAMAL
Trigger: TAAAGCCATTGCAAGGACTCTGGAAACTGCCGCCAATGACCAATTTCTGACTAACCAGCCACCTTTTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CAA 72 bp GCTAAGAGAGAGAAAAGGTGGCTGGTTAGTCAGAAATaGGTCATTGGCGGCAGTTTCCAGAGTCCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: AKREKRWLVSQK*VIGGSFQSPCN
Trigger: ATTGCAAGGACTCTGGAAACTGCCGCCAATGACCAATTTCTGACTAACCAGCCACCTTTTCTCTCTCTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTCTGGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLALGGTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAG...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTATTCTCTGGCGTGGGCTaGGAAGCTTGTTCATGCTCT +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLFSGVG*EACSCS
Trigger: AGAGCATGAACAAGCTTCTCAGCCCACGCCAGAGAA...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGTTCTCTGGCGTGGGCTaGGAAGCTTGTTCATGCTCT +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKFSGVG*EACSCS
Trigger: AGAGCATGAACAAGCTTCTCAGCCCACGCCAGAGAA...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp TTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCA +
Preference number: 4 (lower is better)
Translates to: FKNPFFTISSTTPSDQPNSLVAS*DPPTGP
Trigger: TGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGA...GTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAAACAAGATCCTCAAACTaGGTCCGTGCAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: LSSKDSGVLTCGSLRGIETRSSN*VRANSE
Trigger: TTCTGAATTTGCACGGACTCAGTTTGAGGATCTTGT...TTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCCGAAGGAATTGGTCATATCGTCCATAAACCATCACCCCACTGGAGTCAGAAAACAAGATCCTCAAACTaGGTCCGTGCAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: PEGIGHIVHKPSPHWSQKTRSSN*VRANSE
Trigger: TTCTGAATTTGCACGGACTCAGTTTGAGGATCTTGT...TTTCTGACTCCAGTGGGGTGATGGTTTATGGACGATATGACCAATTCCTTCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR TCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCATATGCACTACAAATCTaGGAACAAAAAGTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSYALQI*EQKVSC
Trigger: GCAGCTAACTTTTTGTTCTCAGATTTGTAGTGCATA...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGGGCGCTTCAGTCACTaGCTCGCCAAACTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKGRFSH*LAKLLE
Trigger: TTCTAAGAGTTTGGCGAGTCAGTGACTGAAGCGCCC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598774.6
ENST00000679936.1
CDS-3UTR TCA 90 bp GTGCAAAAATCCCAACTCAACTTAGAAGAGCCTGTCTCCTTTCACATGACCACACCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: VQKSQLNLEEPVSFHMTTPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...TGTGGTCATGTGAAAGGAGACAGGCTCTTCTAAGTTGAGTTGGGATTTTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR TCA 90 bp CTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAAACCTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LSALMEMDVQFIVEQERNLSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...GTTTCTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTACTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLLSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp CATTTAGTGTACACAGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCTCCACATGGATTTGGTaGGTGGTTGGCATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: HLVYTALLNSTLKTETVGSTWIW*VVGIRL
Trigger: CAAACGGATGCCAACCACTCACCAAATCCATGTGGA...GCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCTGTGTACACTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTCCACATGGATTTGGTaGGTGGTTGGCATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNSTWIW*VVGIRL
Trigger: CAAACGGATGCCAACCACTCACCAAATCCATGTGGA...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTTCCACATGGATTTGGTaGGTGGTTGGCATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFSTWIW*VVGIRL
Trigger: CAAACGGATGCCAACCACTCACCAAATCCATGTGGA...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR TCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTATCTTAATTTGTCCATaGTCTTCCCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFILICP*SSLHTM
Trigger: CATTGTGTGGAGGGAAGATCATGGACAAATTAAGAT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp TGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATCTTAATTTGTCCATaGTCTTCCCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: WRRVGCVRPVLINRLSALILICP*SSLHTM
Trigger: CATTGTGTGGAGGGAAGATCATGGACAAATTAAGAT...CAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp AATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGATCTTAATTTGTCCATaGTCTTCCCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: NMALWRRVGCVRPVLINRILICP*SSLHTM
Trigger: CATTGTGTGGAGGGAAGATCATGGACAAATTAAGAT...CCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACCTGCCGTGGGTAGTTTaGGAACTTCCCGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNLPWVV*ELPEGI
Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAG...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp GTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATAGGGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: VNGYHAPWRNQNSSKYYRETGSG*LFCVTK
Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...CCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp CCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAAGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: PFFTISSTTPSDQPNLPQETGSG*LFCVTK
Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...TTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp ACAGAAAGAAATGTGAGCTTTAAACAACACAACTGTGGTTCACAGAGAACATTCTGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: TERNVSFKQHNCGSQRTFWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...GAATGTTCTCTGTGAACCACAGTTGTGTTGTTTAAAGCTCACATTTCTTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTGGTGCTGGTTGCTATaGGAACCACCGGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAWCWLL*EPPACP
Trigger: GGGACATGCCGGTGGTTCTCATAGCAACCAGCACCA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
CDS-3UTR TCA 90 bp AAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAACTTTTTAACCAGGGATaGACCACGTTACAGAGGATG +
Preference number: 4 (lower is better)
Translates to: KATCRTPGGQLRQSTFRKLFNQG*TTLQRM
Trigger: CATCCTCTGTAACGTGGTTCATCCCTGGTTAAAAAG...TTTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTACTGATTAGAGTATCTTaGAAGAAAACAACCTCGAGT +
Preference number: 4 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLLIRVS*KKTTSS
Trigger: ACTCGAGGTTGTTTTCTTTCAAGATACTCTAATCAG...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACCTGTCTCCTTTCACATaGCCACAGAAGGCTACATGC +
Preference number: 4 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNLSPFT*PQKATC
Trigger: GCATGTAGCCTTCTGTGGTCATGTGAAAGGAGACAG...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCCTGAATCCACTTCAGCTTTTCACTaGGTGCAAAAATCCCAACTC +
Preference number: 4 (lower is better)
Translates to: NQTYPNFRPDQPQLFPESTSAFH*VQKSQL
Trigger: GAGTTGGGATTTTTGCACTCAGTGAAAAGCTGAAGT...GGATTCAGGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCACTTTCTTGCTTATTCTaGATAAGGCCTTTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSLSCLF*IRPFQR
Trigger: TCTCTGAAAAGGCCTTATTCAGAATAAGCAAGAAAG...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGTATCCCCAAGGCAAGTaGTTTGGTTTCAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKYPQGK*FGFKGQ
Trigger: CTGCCCTTTGAAACCAAATCACTTGCCTTGGGGATA...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAGAGACATTTGTCAGGTaGGTTCTCTGGAGAGATATA +
Preference number: 4 (lower is better)
Translates to: PLIWRCGGGLAVLDQCLLETFVR*VLWRDI
Trigger: TATATCTCTCCAGAGAACTCACCTGACAAATGTCTC...TAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTACTGTGCAAAGAAATCTaGGAACTGTGCAGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLLCKEI*ELCSCA
Trigger: GGCACAACTGCACAGTTCTCAGATTTCTTTGCACAG...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAAGCAGGATTTAAGTTCTaGGTTCAAGAACTACCTGGC +
Preference number: 4 (lower is better)
Translates to: KATCRTPGGQLRQSTFRKAGFKF*VQELPG
Trigger: GCCAGGTAGTTCTTGAACTCAGAACTTAAATCCTGC...TTTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCTGCAATGGCTTTATATaGCGATATCAACAACCATGT +
Preference number: 4 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSCNGFI*RYQQPC
Trigger: ACATGGTTGTTGATATCGTCATATAAAGCCATTGCA...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTAAATGGACAGGACAAGTaGAACTTGCTGGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLNGQDK*NLLGLH
Trigger: GTGCAAACCCAGCAAGTTTCACTTGTCCTGTCCATT...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GTGTATTGGAAATACAATAGCAATACCCCATGTATGCATTCATGGGCAATTATATTGCTGACATCTGGGTaGCGTGGGCCCTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VYWKYNSNTPCMHSWAIILLTSG*RGPWSL
Trigger: CAAGGACCAGGGCCCACGTCACCCAGATGTCAGCAA...TATAATTGCCCATGAATGCATACATGGGGTATTGCTATTGTATTTCCAATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR TCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCACATAACAGAACTCTCTaGAATTCTAGGGAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPHNRTL*NSRESY
Trigger: ATAGCTCTCCCTAGAATTTCAGAGAGTTCTGTTATG...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
CDS-3UTR GCA 90 bp AAAAGGGAAATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACTCTGGGAACATGGGGTaGAAAGGTTCACGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: KREIIIFWVNGYHAPWRNSGNMG*KGSRLE
Trigger: TTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGA...GTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTATTTCCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR GCA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: MCNSLWNKKETTPARCSCTGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLTGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAAGACGAAGAGGACTCTaGTGCCAGCCTTGCCGCATA +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIRRRGL*CQPCRI
Trigger: TATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAAGACGAAGAGGACTCTaGTGCCAGCCTTGCCGCATA +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRRRRGL*CQPCRI
Trigger: TATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TATTTGGACAGCATTTGTTTATTTCCTTGCAGAACCGCCTCTATAGGGCTGGGAATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: YLDSICLFPCRTASIGLGISCLC*LFASMV
Trigger: CACCATCGATGCGAATAAGCAGCAAAGGCAGCTGAT...TCCCAGCCCTATAGAGGCGGTTCTGCAAGGAAATAAACAAATGCTGTCCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp ATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: IEPRGMQQPKVAGFTRSIISCLC*LFASMV
Trigger: CACCATCGATGCGAATAAGCAGCAAAGGCAGCTGAT...GATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: FKNPFFTISSTTPSDQPNISCLC*LFASMV
Trigger: CACCATCGATGCGAATAAGCAGCAAAGGCAGCTGAT...GTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GCCAAAACGAGAGGAACAAGACCATGGAAGAGCAGAGATAACTTTAGTCCGTTTATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: AKTRGTRPWKSRDNFSPFISCLC*LFASMV
Trigger: CACCATCGATGCGAATAAGCAGCAAAGGCAGCTGAT...AAACGGACTAAAGTTATCTCTGCTCTTCCATGGTCTTGTTCCTCTCGTTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTAGCTCAGCAATCAGCTaGCTTTGCTGCTTATTCGCA +
Preference number: 4 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSSSAIS*LCCLFA
Trigger: TGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCT...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCTCAAACTGAGTCCGTaGAAATTCAGAATCCACATT +
Preference number: 4 (lower is better)
Translates to: PLTNQTYPNFRPDQPQLFLKLSP*KFRIHI
Trigger: AATGTGGATTCTGAATTTGCACGGACTCAGTTTGAG...AAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GAAAGAAATGTGAGCTTTAAACAACACAACTGTGGTTCACAGAGAACATTCCAAACAGCAGAGGCTGGCTaGTGCCAGTACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: ERNVSFKQHNCGSQRTFQTAEAG*CQYQGF
Trigger: GAAACCCTGGTACTGGCAGCAGCCAGCCTCTGCTGT...TTGGAATGTTCTCTGTGAACCACAGTTGTGTTGTTTAAAGCTCACATTTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315456.10
CDS-3UTR GCA 90 bp TTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: FWVNGYHAPWRNQNSSKYLSPHL*KQLSSF
Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...ATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR GCA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACATTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTLSPHL*KQLSSF
Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR GCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRRWRVG*DPDLEP
Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp AACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: NPFFTISSTTPSDQPNLPKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...GGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGCCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp TATTTGGACAGCATTTGTTTATTTCCTTGCAGAACCGCCTCTATAGGGCTGGGATTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: YLDSICLFPCRTASIGLGFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...TCCCAGCCCTATAGAGGCGGTTCTGCAAGGAAATAAACAAATGCTGTCCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATTTTGGTTCAAGTCACTaGTCACAGAGACTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: LFPESHAVDFTFLPSSINFGSSH*SQRLGV
Trigger: GACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAA...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCAGCTTTTCACTGAGTaGAAAAATCCCAACTCAACT +
Preference number: 4 (lower is better)
Translates to: PLTNQTYPNFRPDQPQLFQLFTE*KNPNST
Trigger: AGTTGAGTTGGGATTTTTGCACTCAGTGAAAAGCTG...AAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCAGAACTGTGCAGTTGTaGCACTTTGGTGTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVRTVQL*HFGVSL
Trigger: CAGGCTGACACCAAAGTGGCACAACTGCACAGTTCT...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGCAGTCAGTGGTGGAGTaGCACGTGCAGGATTTAAGT +
Preference number: 4 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKQSVVE*HVQDLS
Trigger: ACTTAAATCCTGCACGTGGCACTCCACCACTGACTG...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCCTGAATCCGCTGTGTTAGACCAGTaGTTATTAACAGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: NQTYPNFRPDQPQLFPESAVLDQ*LLTGYQ
Trigger: CTGATAGCCTGTTAATAAGCACTGGTCTAACACAGC...GGATTCAGGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTTGCTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGGCAGCAACCAAAGGTTaGTGGATTTACAAGATCTAT +
Preference number: 4 (lower is better)
Translates to: LAGFALRTGPKSKSGEPRAATKG*WIYKIY
Trigger: ATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC...CCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGGCAGCAACCAAAGGTTaGTGGATTTACAAGATCTAT +
Preference number: 4 (lower is better)
Translates to: ESHAVDFTFLPSSINMALAATKG*WIYKIY
Trigger: ATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CACGTTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCTTAAATGCACCAACATaGCCCTTAATTCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HVEFSVWVQVVQSIFPQCLNAPT*PLILPL
Trigger: CAGAGGAAGAATTAAGGGGCATGTTGGTGCATTTAA...GCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACTGAACTCAACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588949.6
CDS-3UTR GCA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTTAAATGCACCAACATaGCCCTTAATTCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ESHAVDFTFLPSSINMALLNAPT*PLILPL
Trigger: CAGAGGAAGAATTAAGGGGCATGTTGGTGCATTTAA...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679796.1
ENST00000680822.1
CDS-3UTR GCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTCTGTTAGTTAAGACCTaGAGTAGGGGACATAACTTA +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFLLVKT*SRGHNL
Trigger: TAAGTTATGTCCCCTACTGCAGGTCTTAACTAACAG...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: MCNSLWNKKETTPARCSCLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVICWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATTGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDCWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGTCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: RVGCVRPVLINRLSALMESSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...CTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAGTGCCTTCTCTGGCGTaGGCTGAGAAGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLVPSLA*AEKLVH
Trigger: ATGAACAAGCTTCTCAGCCCACGCCAGAGAAGGCAC...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGTGCCTTCTCTGGCGTaGGCTGAGAAGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKVPSLA*AEKLVH
Trigger: ATGAACAAGCTTCTCAGCCCACGCCAGAGAAGGCAC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTATCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGTCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGATGGGCATGGGAATTaGCCTGCTGATGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIDGHGN*PADGVA
Trigger: AGCCACACCATCAGCAGGCCAATTCCCATGCCCATC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTAGGTATTCCTCCATCTaGAGCTCATTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PVLINRLSALMEMDVQFIRYSSI*SSFSSC
Trigger: GCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCT...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAAGGTATTCCTCCATCTaGAGCTCATTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GNAATKGCWIYKIYLRLTRYSSI*SSFSSC
Trigger: GCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCT...TGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATCTGTCAGGAGCTGCTaGGTGTGGTGGTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVISVRSC*VWWFLS
Trigger: AGAGAGGAACCACCACACCCAGCAGCTCCTGACAGA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA +
Preference number: 4 (lower is better)
Translates to: GNAATKGCWIYKIYLRLTMLFCR*RVGCDP
Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...TGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp TTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: FKNPFFTISSTTPSDQPNDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...GTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp GAAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAAAACCATCACCCCACTaGAGTCAGAAATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: EGYMQNTRWPAKAINIQKKPSPH*SQKSLR
Trigger: TCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTT...TTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR CCA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCATCACCCCACTaGAGTCAGAAATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKKPSPH*SQKSLR
Trigger: TCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTT...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAGAACACTCAACCGGATaGAAGACATTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPEHSTG*KTFSTF
Trigger: AAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTC...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGAACACTCAACCGGATaGAAGACATTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFEHSTG*KTFSTF
Trigger: AAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp GGGCCCTCTAAAGAGGGTCCTTGGAAAAGACTATCCCAGTCTTTTATCCTCTTGTCTAAAGAGGGTCCTTaGAAAAGACTATCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GPSKEGPWKRLSQSFILLSKEGP*KRLSQS
Trigger: AGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGA...CAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTATGTCAGGACTTGGCTaGGCACCTACCAACTACGAA +
Preference number: 4 (lower is better)
Translates to: PVLINRLSALMEMDVQFIMSGLG*APTNYE
Trigger: TTCGTAGTTGGTAGGTGCCCAGCCAAGTCCTGACAT...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCGAAGATGTCAGGACTTaGCTGGGCACCTACCAACTA +
Preference number: 4 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSEDVRT*LGTYQL
Trigger: TAGTTGGTAGGTGCCCAGCCAAGTCCTGACATCTTC...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGCCAAGGCAAGTGATTTaGTTTCAAAGGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKPRQVI*FQRAAK
Trigger: CTTGGCTGCCCTTTGAAACCAAATCACTTGCCTTGG...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GTGCAAAAATCCCAACTCAACTTAGAAGAGCCTGTCTCCTTTCACATGACCACACCAAGGCAAGTGATTTaGTTTCAAAGGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: VQKSQLNLEEPVSFHMTTPRQVI*FQRAAK
Trigger: CTTGGCTGCCCTTTGAAACCAAATCACTTGCCTTGG...TGTGGTCATGTGAAAGGAGACAGGCTCTTCTAAGTTGAGTTGGGATTTTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGCCATCTAGAGAGGTATaGGTTCACAGAGGATGGGCA +
Preference number: 4 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKPSREV*VHRGWA
Trigger: TGCCCATCCTCTGTGAACCCATACCTCTCTAGATGG...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTAGCATTATAGGTAGCTaGGATGTAGTGGTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVSIIGS*DVVVFN
Trigger: ATTGAAAACCACTACATCCCAGCTACCTATAATGCT...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAATGGTTAGTCAGAAATTaGTCATTGGCGGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: PFFTISSTTPSDQPNLPQWLVRN*SLAAVS
Trigger: GGAAACTGCCGCCAATGACCAATTTCTGACTAACCA...TTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTAGCAACCAAAGGTTGCTaGATTTACAAGATCTATCTA +
Preference number: 4 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLATKGC*IYKIYL
Trigger: TAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCTTGTGGCTCCTTGCGTaGAATCGAACCAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSLWLLA*NRTKGN
Trigger: ATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTTGGAGTTCTCACTTGTaGCTCCTTGCGTGGAATCGA +
Preference number: 4 (lower is better)
Translates to: PVLINRLSALMEMDVQFIWSSHL*LLAWNR
Trigger: TCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCA...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CATTTAGTGTACACAGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCTGCTGGTTACAGGTCTaGGAGGCCAAGTATCAACGA +
Preference number: 4 (lower is better)
Translates to: HLVYTALLNSTLKTETVGCWLQV*EAKYQR
Trigger: TCGTTGATACTTGGCCTCCCAGACCTGTAACCAGCA...GCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCTGTGTACACTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315456.10
CDS-3UTR CCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTTGCTGGTTACAGGTCTaGGAGGCCAAGTATCAACGA +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFCWLQV*EAKYQR
Trigger: TCGTTGATACTTGGCCTCCCAGACCTGTAACCAGCA...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598142.5
CDS-3UTR CCA 90 bp ATCCTGCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGTGTTCCCCTGAGAAGTaGTATTTCTGTACTGATAAA +
Preference number: 4 (lower is better)
Translates to: ILLPGKWPGKYPQGKWLKCSPEK*YFCTDK
Trigger: TTTATCAGTACAGAAATACCACTTCTCAGGGGAACA...CTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR CAA 72 bp AAAGAGGCCCCAAAGAATGGATTATTCCTGGTGTGTTaGGTTCAAGTCACTGCTCACAGAGACTTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: KEAPKNGLFLVC*VQVTAHRDLES
Trigger: TGACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAACACACCAGGAATAATCCATTCTTTGGGGCCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CAA 72 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTaGTGCCACTTTGGTGTCAGCCTGTGCTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: NQSVQRNLRTVQ*CHFGVSLCSET
Trigger: TGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CAA 72 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTaGCTGGATTTACAAGATCTATCTACGGTTAACAGC +
Preference number: 4 (lower is better)
Translates to: VESNQGECSNQR*LDLQDLSTVNS
Trigger: GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680767.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
3UTR CAA 72 bp CCAAATGAAGGACCTTCAAAAACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAATTGGTCATATCGTCCA +
Preference number: 4 (lower is better)
Translates to: PNEGPSKTAVGS*RTSRRNWSYRP
Trigger: TGGACGATATGACCAATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGTTTTTGAAGGTCCTTCATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR CAA 72 bp CATTCAACCTTGCAAGCTGACCTGATAAGCTTCATCTaGCAGCTTCTGTTTCAGGTATTCCTCCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: HSTLQADLISFI*QLLFQVFLHLE
Trigger: CTCCAGATGGAGGAATACCTGAAACAGAAGCTGCAAGATGAAGCTTATCAGGTCAGCTTGCAAGGTTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR TCA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATTCTCTGGCGTGGGCTaGGAAGCTTGTTCATGCTCT +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIFSGVG*EACSCS
Trigger: AGAGCATGAACAAGCTTCTCAGCCCACGCCAGAGAA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCACAAGATCCTCAAACTaGGTCCGTGCAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFTRSSN*VRANSE
Trigger: TTCTGAATTTGCACGGACTCAGTTTGAGGATCTTGT...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AAGTGTTGCAGATGCTGCTTGTCCGGGGAACACACTTTGAGAACTATTGTTCTACTTTTCAGAGGTTGGTaGGGGAACAAGATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: KCCRCCLSGEHTLRTIVLLFRGW*GNKILK
Trigger: TTTGAGGATCTTGTTCCCTCACCAACCTCTGAAAAG...TAGAACAATAGTTCTCAAAGTGTGTTCCCCGGACAAGCAGCATCTGCAACACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACCTTTTCAGAGGTTGGTaGGGGAACAAGATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNLFRGW*GNKILK
Trigger: TTTGAGGATCTTGTTCCCTCACCAACCTCTGAAAAG...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGCTTTTCAGAGGTTGGTaGGGGAACAAGATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKLFRGW*GNKILK
Trigger: TTTGAGGATCTTGTTCCCTCACCAACCTCTGAAAAG...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGTGGTAGCTCCACTGTaGATGTACCCAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIVVAPL*MYPGFR
Trigger: CCGAAAACCTGGGTACATTCACAGTGGAGCTACCAC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AAAAGGGAAATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACATGCGATCCAGATCTTaGGCCCTCATCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: KREIIIFWVNGYHAPWRNMRSRS*ALISAN
Trigger: GTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCAT...GTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTATTTCCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGATGCGATCCAGATCTTaGGCCCTCATCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKMRSRS*ALISAN
Trigger: GTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCAT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
CDS-3UTR TCA 90 bp ATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAATGCGATCCAGATCTTaGGCCCTCATCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: INRLSALMEMDVQFIVEQMRSRS*ALISAN
Trigger: GTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCAT...TTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTCCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR TCA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTCCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PVLINRLSALMEMDVQFIPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGACTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRLSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTATCCACATGGATTTGGTaGGTGGTTGGCATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLSTWIW*VVGIRL
Trigger: CAAACGGATGCCAACCACTCACCAAATCCATGTGGA...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGTCCACATGGATTTGGTaGGTGGTTGGCATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKSTWIW*VVGIRL
Trigger: CAAACGGATGCCAACCACTCACCAAATCCATGTGGA...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTACTGCCGTGGGTAGTTTaGGAACTTCCCGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLLPWVV*ELPEGI
Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAG...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp TCATTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: SFKNPFFTISSTTPSDQPETGSG*LFCVTK
Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...TGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTETGSG*LFCVTK
Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTCTGCGGGGGAGGATCTaGCATAAGCGTGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLALRGRI*HKRVQE
Trigger: TTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAG...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR TCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTTTCATCAAGCCGGTTTaGACTCTCAAGCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFFIKPV*TLKHAP
Trigger: AGGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAA...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AAAGAAAACAACCTCGAGTTGGAAAGAGGCCCCAAAGAATGGATTATTCCTGGTTTCATCAAGCCGGTTTaGACTCTCAAGCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: KENNLELERGPKEWIIPGFIKPV*TLKHAP
Trigger: AGGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAA...ACCAGGAATAATCCATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATTCTTCAGGGTTATTaGATGATTGCAAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGILQGY*MIASGC
Trigger: ACAACCACTTGCAATCATTCAATAACCCTGAAGAAT...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CTTGCTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGCTTTCTTGCTTATTCTaGATAAGGCCTTTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LAGFALRTGPKSKSGEPRLSCLF*IRPFQR
Trigger: TCTCTGAAAAGGCCTTATTCAGAATAAGCAAGAAAG...CCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAGGGCAGCCAAGGAGATaGTGTCTGACCAAACGCAGA +
Preference number: 4 (lower is better)
Translates to: QRLLDLQDLSTVNSQELIGQPRR*CLTKRR
Trigger: TCTGCGTTTGGTCAGACATCATCTCCTTGGCTGCCC...TATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCTATCCCCAAGGCAAGTaGTTTGGTTTCAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVYPQGK*FGFKGQ
Trigger: CTGCCCTTTGAAACCAAATCACTTGCCTTGGGGATA...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCTGTGCAAAGAAATCTaGGAACTGTGCAGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSLCKEI*ELCSCA
Trigger: GGCACAACTGCACAGTTCTCAGATTTCTTTGCACAG...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGGCAGGATTTAAGTTCTaGGTTCAAGAACTACCTGGC +
Preference number: 4 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKAGFKF*VQELPG
Trigger: GCCAGGTAGTTCTTGAACTCAGAACTTAAATCCTGC...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGAATGGACAGGACAAGTaGAACTTGCTGGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKNGQDK*NLLGLH
Trigger: GTGCAAACCCAGCAAGTTTCACTTGTCCTGTCCATT...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATCAGTGCTAAATTATaGTGCAACAGTTTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: WRRVGCVRPVLINRLSALISAKL*CNSLAH
Trigger: ATGAGCCAAACTGTTGCATCATAATTTAGCACTGAT...CAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATAGGAATATTTCAAGTATCAACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GTMHPGGTRTAQSIIGIFQVSTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTTGATACTTG...AAATATTCCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315456.10
CDS-3UTR TCA 90 bp ATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTGTACACAGCTTTATTaGACAGCACCCTCAAAACAG +
Preference number: 4 (lower is better)
Translates to: IFWVNGYHAPWRNQNSSKCTQLY*TAPSKQ
Trigger: CTGTTTTGAGGGTGCTGTTCAATAAAGCTGTGTACA...CTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp TTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTGTACACAGCTTTATTaGACAGCACCCTCAAAACAG +
Preference number: 4 (lower is better)
Translates to: FWVNGYHAPWRNQNSSKYCTQLY*TAPSKQ
Trigger: CTGTTTTGAGGGTGCTGTTCAATAAAGCTGTGTACA...ATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTACCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCA +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLPLVAS*DPPTGP
Trigger: TGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGG...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGTAGAGGTTAGCTTCTaGGTGCTGTGGGTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKVEVSF*VLWVLG
Trigger: TCCCAAAACCCACAGCACTCAGAAGCTAACCTCTAC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGACTGATGACGACAGGATaGTTGCCCTCTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRLMTTG*LPSLSA
Trigger: AGCAGAGAGAGAGGGCAATCATCCTGTCGTCATCAG...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR TCA 90 bp TTCCCGCAATGCTTCTATGACATTCCATATGTCCACCAGGTGCAAATTGCATTTGGTCACAATTCCAGGTaGAGACACAGTACCACACAT +
Preference number: 4 (lower is better)
Translates to: FPQCFYDIPYVHQVQIAFGHNSR*RHSTTH
Trigger: ATGTGTGGTACTGTGTCTTCACCTGGAATTGTGACC...AAATGCAATTTGCACCTGGTGGACATATGGAATGTCATAGAAGCATTGCGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS-3UTR TCA 90 bp ATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGTCTGGTCTCAGTGCTaGCGTGGAGTTGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: IHCGTRKKQPPQDVVVSNVWSQC*RGVERS
Trigger: ACTCCTCTCAACTCCACGTCAGCACTGAGACCAGAC...ATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATCTGGGAACATGGGGTaGAAAGGTTCACGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVISGNMG*KGSRLE
Trigger: TTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCTCTGGGAACATGGGGTaGAAAGGTTCACGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFSGNMG*KGSRLE
Trigger: TTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGA...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS-3UTR GCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRTGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVITGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDTGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TATTTGGACAGCATTTGTTTATTTCCTTGCAGAACCGCCTCTATAGGGCTGGGATGTACTGTATCCCTTTaGCCTTCAGAAAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: YLDSICLFPCRTASIGLGCTVSL*PSEKLE
Trigger: CTCCAGCTTTTCTGAAGGGCAAAGGGATACAGTACA...TCCCAGCCCTATAGAGGCGGTTCTGCAAGGAAATAAACAAATGCTGTCCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTAGACGAAGAGGACTCTaGTGCCAGCCTTGCCGCATA +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLARRRGL*CQPCRI
Trigger: TATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCT...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTAGCTCAGCAATCAGCTaGCTTTGCTGCTTATTCGCA +
Preference number: 4 (lower is better)
Translates to: GCAIHCGTRKKQPPQDVVSSAIS*LCCLFA
Trigger: TGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCT...AACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ACGTTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCTCTCAAACTGAGTCCGTaGAAATTCAGAATCCACATT +
Preference number: 4 (lower is better)
Translates to: TLSSVFGSRLFRAFSRNALKLSP*KFRIHI
Trigger: AATGTGGATTCTGAATTTGCACGGACTCAGTTTGAG...AGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACTGAACTCAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR GCA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATTTTCGGGCATGGATTTaGGCTAGAAAAGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: VESNQGECSNQRLLDLQDFRAWI*ARKAFS
Trigger: TGAAAAGGCTTTTCTAGCGCAAATCCATGCCCGAAA...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTAGCTCATTCTCCAGCTaGCGGACAGAGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFSSFSS*RTESFS
Trigger: TGAAAATGACTCTGTCCGGCAGCTGGAGAATGAGCT...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCCTGAATCCCAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: NQTYPNFRPDQPQLFPESQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...GGATTCAGGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp CCTTTCTTCTCTGCACCACGATTTCAGATGATAGTTGATTTGGGCTCAGAGAAATTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: PFFSAPRFQMIVDLGSEKFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...TTTCTCTGAGCCCAAATCAACTATCATCTGAAATCGTGGTGCAGAGAAGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681065.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKTFASR*RRGNQT
Trigger: GGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGT...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp AATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATTCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: NRTKGNAATKGCWIYKIYSFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...ATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp GGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATAGGAATATTTTCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: GTMHPGGTRTAQSIIGIFSFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...AAATATTCCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR GCA 90 bp AGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGCAGCCTGTGTTTGTTTaGTTTTTAACCAGGGATGAA +
Preference number: 4 (lower is better)
Translates to: RRVGCVRPVLINRLSALMQPVFV*FLTRDE
Trigger: TTCATCCCTGGTTAAAAAGCAAACAAACACAGGCTG...CATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTTTTGGTTCAAGTCACTaGTCACAGAGACTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSFGSSH*SQRLGV
Trigger: GACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAA...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGTTTGGTTCAAGTCACTaGTCACAGAGACTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKFGSSH*SQRLGV
Trigger: GACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAA...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACTTTGGTTCAAGTCACTaGTCACAGAGACTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNFGSSH*SQRLGV
Trigger: GACTCCAAGTCTCTGTGAGCAGTGACTTGAACCAAA...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAGAACTGTGCAGTTGTaGCACTTTGGTGTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LDLQDLSTVNSQELIRVDRTVQL*HFGVSL
Trigger: CAGGCTGACACCAAAGTGGCACAACTGCACAGTTCT...GTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GTGCAAAAATCCCAACTCAACTTAGAAGAGCCTGTCTCCTTTCACATGACCACACAAAGAAACAACATATaGCAGCTCGGTCCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: VQKSQLNLEEPVSFHMTTQRNNI*QLGPVS
Trigger: ACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTG...TGTGGTCATGTGAAAGGAGACAGGCTCTTCTAAGTTGAGTTGGGATTTTTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ACCATTGAGCACTTAATATTTGCAGAATACATGGCTAGATGCAGAGGATTCAAACTTACAGGACAGGGGTaGTCGAGTCTGGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: TIEHLIFAEYMARCRGFKLTGQG*SSLVSV
Trigger: CACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAG...TTTGAATCCTCTGCATCTAGCCATGTATTCTGCAAATATTAAGTGCTCAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR GCA 90 bp CCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAAGCTGTGTTAGACCAGTaGTTATTAACAGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: PFFTISSTTPSDQPNLPQAVLDQ*LLTGYQ
Trigger: CTGATAGCCTGTTAATAAGCACTGGTCTAACACAGC...TTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GAAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAGCAGCAACCAAAGGTTaGTGGATTTACAAGATCTAT +
Preference number: 4 (lower is better)
Translates to: EGYMQNTRWPAKAINIQKAATKG*WIYKIY
Trigger: ATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC...TTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CACGTTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCGGTTTTGTAGTTAAATaGACCAACATGCCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: HVEFSVWVQVVQSIFPQCGFVVK*TNMPLN
Trigger: ATTAAGGGGCATGTTGGTGCATTTAACTACAAAACC...GCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACTGAACTCAACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588949.6
CDS-3UTR GCA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACATCCATCAATGGGTCCTaGTTTAAACTGCAAGTACCT +
Preference number: 4 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTSINGS*FKLQVP
Trigger: AGGTACTTGCAGTTTAAAGCAGGACCCATTGATGGA...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: QRLLDLQDLSTVNSQELIADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...TATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAAAGAAATGTGAGCTTTAAACAACACAACTGTGGTTCACAGAGAACATTCCAAGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: ERNVSFKQHNCGSQRTFQADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...TTGGAATGTTCTCTGTGAACCACAGTTGTGTTGTTTAAAGCTCACATTTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVILLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGACTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTGCTGGTTACAGGTCTaGGAGGCACGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLACWLQV*EARCEP
Trigger: TGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACTTCAGCCACAGGGCTaGATGCACTTATTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVILQPQG*MHLFPQ
Trigger: CTGAGGGAATAAGTGCATCCAGCCCTGTGGCTGAAG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269192.11
ENST00000556414.7
CDS-3UTR CCA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATTCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: VESNQGECSNQRLLDLQDSSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGTGCCTTCTCTGGCGTaGGCTGAGAAGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIVPSLA*AEKLVH
Trigger: ATGAACAAGCTTCTCAGCCCACGCCAGAGAAGGCAC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATGTGCCTTCTCTGGCGTaGGCTGAGAAGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDVPSLA*AEKLVH
Trigger: ATGAACAAGCTTCTCAGCCCACGCCAGAGAAGGCAC...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGTGCCTTCTCTGGCGTaGGCTGAGAAGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRVPSLA*AEKLVH
Trigger: ATGAACAAGCTTCTCAGCCCACGCCAGAGAAGGCAC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVISLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGATCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRSLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIMRPSN*TISSLR
Trigger: CCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCAT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRMRPSN*TISSLR
Trigger: CCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCAT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDMRPSN*TISSLR
Trigger: CCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCAT...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTCTGTCAGGAGCTGCTaGGTGTGGTGGTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLASVRSC*VWWFLS
Trigger: AGAGAGGAACCACCACACCCAGCAGCTCCTGACAGA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAAACATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA +
Preference number: 4 (lower is better)
Translates to: LSALMEMDVQFIVEQERNMLFCR*RVGCDP
Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...GTTTCTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp CCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAGAACACTCAACCGGATaGAAGACATTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: PLIWRCGGGLAVLDQCLLEHSTG*KTFSTF
Trigger: AAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTC...TAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTTTGGGGATCTTATaGCACCTGTGGTTTATAAAC +
Preference number: 4 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFRLGIL*HLWFIN
Trigger: GTTTATAAACCACAGGTGCCATAAGATCCCCAAACG...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGTACCAACTACGAACTTaGTGTGTGGGTTCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKYQLRT*CVGSEK
Trigger: CTTCTCTGAACCCACACACCAAGTTCGTAGTTGGTA...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCTCAGAAATTGGTCATTaGCGGCAGTTTCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVSEIGH*RQFPES
Trigger: GGACTCTGGAAACTGCCGCCAATGACCAATTTCTGA...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGGCAAGAGAAGGTGAGCTATTTTGCCTCGGTGGCTCAATATTCCATCAATGGGAAGAGAGAGAAAAGGTaGCTGGTTAGTCAGAAATTG +
Preference number: 4 (lower is better)
Translates to: RQEKVSYFASVAQYSINGKREKR*LVSQKL
Trigger: CAATTTCTGACTAACCAGCCACCTTTTCTCTCTCTT...CCCATTGATGGAATATTGAGCCACCGAGGCAAAATAGCTCACCTTCTCTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR CCA 90 bp AATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATATTAATATGGCGCTGTaGAGGAGGGTTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: NRTKGNAATKGCWIYKIYINMAL*RRVGCV
Trigger: AACACAGCCAACCCTCCTCCACAGCGCCATATTAAT...ATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGATTAATATGGCGCTGTaGAGGAGGGTTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKINMAL*RRVGCV
Trigger: AACACAGCCAACCCTCCTCCACAGCGCCATATTAAT...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTAGCAACCAAAGGTTGCTaGATTTACAAGATCTATCTA +
Preference number: 4 (lower is better)
Translates to: PCVESNQGECSNQRLLDLATKGC*IYKIYL
Trigger: TAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTATGCTGGTTACAGGTCTaGGAGGCCAAGTATCAACGA +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLCWLQV*EAKYQR
Trigger: TCGTTGATACTTGGCCTCCCAGACCTGTAACCAGCA...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
CDS-3UTR CCA 90 bp GAAAGAAATGTGAGCTTTAAACAACACAACTGTGGTTCACAGAGAACATTCCAAGGGTACCATGCACCCTaGAGGAACCAGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: ERNVSFKQHNCGSQRTFQGYHAP*RNQNSS
Trigger: TGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCC...TTGGAATGTTCTCTGTGAACCACAGTTGTGTTGTTTAAAGCTCACATTTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGAGTGCTGTGGGTTTTaGGATGACATGAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKECCGF*DDMNLR
Trigger: CCTGAGGTTCATGTCATCCCAAAACCCACAGCACTC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGACTGCTGCCTGGGAAATaGCCTGGAAAGTATCCCCAA +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRLLPGK*PGKYPQ
Trigger: TTGGGGATACTTTCCAGGCCATTTCCCAGGCAGCAG...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR CAA 72 bp CAAGACCATGGAAGAGCAGAGATAACTTTAGTCCGTTaGGGGATCTTATGGCACCTGTGGTTTATAAACAGC +
Preference number: 4 (lower is better)
Translates to: QDHGRAEITLVR*GILWHLWFINS
Trigger: GCTGTTTATAAACCACAGGTGCCATAAGATCCCCAAACGGACTAAAGTTATCTCTGCTCTTCCATGGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAAACTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: LSALMEMDVQFIVEQERNYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...GTTTCTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp CTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACTCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCA +
Preference number: 4 (lower is better)
Translates to: LDLQDLSTVNSQELIRVDSLVAS*DPPTGP
Trigger: TGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGA...GTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGTGGTAGCTCCACTGTaGATGTACCCAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: IHCGTRKKQPPQDVVVSNVVAPL*MYPGFR
Trigger: CCGAAAACCTGGGTACATTCACAGTGGAGCTACCAC...ATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGTATGCACTACAAATCTaGGAACAAAAAGTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: RVGCVRPVLINRLSALMEYALQI*EQKVSC
Trigger: GCAGCTAACTTTTTGTTCTCAGATTTGTAGTGCATA...CTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAATGCGATCCAGATCTTaGGCCCTCATCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIMRSRS*ALISAN
Trigger: GTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCAT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp ATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGATCTTAATTTGTCCATaGTCTTCCCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: IFWVNGYHAPWRNQNSSKILICP*SSLHTM
Trigger: CATTGTGTGGAGGGAAGATCATGGACAAATTAAGAT...CTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGTTCATCAAGCCGGTTTaGACTCTCAAGCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKFIKPV*TLKHAP
Trigger: AGGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAA...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000597674.5
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTATTCATCAAGCCGGTTTaGACTCTCAAGCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLFIKPV*TLKHAP
Trigger: AGGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAA...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000597674.5
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACACTTCAGCTTTTCACTaGGTGCAAAAATCCCAACTC +
Preference number: 4 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNTSAFH*VQKSQL
Trigger: GAGTTGGGATTTTTGCACTCAGTGAAAAGCTGAAGT...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGCTCTGGAGAGATATATaGTTAAGTATGTCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: RVGCVRPVLINRLSALMELWRDI*LSMSRD
Trigger: ATCCCTTGACATACTTAATCATATATCTCTCCAGAG...CTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCGCAGTGGAAAAGAGATaGACATTAAGACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVAVEKR*TLRHPN
Trigger: GTTGGGGTGTCTTAATGTTCATCTCTTTTCCACTGC...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AGAGTCCTTGCAATGGCTTTATATGACGATATCAACAACCATGTGATGGAGTTGGGAGTTGGTTGGCAATaGAATAGCTATGACAACGGG +
Preference number: 4 (lower is better)
Translates to: RVLAMALYDDINNHVMELGVGWQ*NSYDNG
Trigger: CCCGTTGTCATAGCTATTTCATTGCCAACCAACTCC...CAACTCCATCACATGGTTGTTGATATCGTCATATAAAGCCATTGCAAGGACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGATATCAACAACCATGTaGTGGAGTTGGTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKISTTM*WSWLAM
Trigger: CATTGCCAACCAACTCCATCACATGGTTGTTGATAT...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AAGTGTTGCAGATGCTGCTTGTCCGGGGAACACACTTTGAGAACTATTGTTCTAATATCAACAACCATGTaGTGGAGTTGGTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: KCCRCCLSGEHTLRTIVLISTTM*WSWLAM
Trigger: CATTGCCAACCAACTCCATCACATGGTTGTTGATAT...TAGAACAATAGTTCTCAAAGTGTGTTCCCCGGACAAGCAGCATCTGCAACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAATGGACAGGACAAGTaGAACTTGCTGGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: LDLQDLSTVNSQELIRVDNGQDK*NLLGLH
Trigger: GTGCAAACCCAGCAAGTTTCACTTGTCCTGTCCATT...GTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTAATGGACAGGACAAGTaGAACTTGCTGGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: MCNSLWNKKETTPARCSCNGQDK*NLLGLH
Trigger: GTGCAAACCCAGCAAGTTTCACTTGTCCTGTCCATT...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACACCACAACTGTTTCCTaGATCCCATGCAGTAGATTT +
Preference number: 4 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNTTTVS*IPCSRF
Trigger: AAATCTACTGCATGGGATTCAGGAAACAGTTGTGGT...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCAAGTATCAACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKQVSTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTTGATACTTG...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
CDS-3UTR TCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTACAAGTATCAACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLQVSTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTTGATACTTG...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
CDS-3UTR TCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGACCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCA +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRPLVAS*DPPTGP
Trigger: TGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGG...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTATTAGAGCAAAAGCAATaGGAAAACCGCAGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLLEQKQ*ENRRSA
Trigger: TGCCGACCTGCGGTTTTCTCATTGCTTTTGCTCTAA...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTCAGACGATGTATTGCTaGCATCTGGGTGACGTGGGC +
Preference number: 4 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFQTMYC*HLGDVG
Trigger: GCCCACGTCACCCAGATGTCAGCAATACATCGTCTG...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR TCA 90 bp ATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGCATAACAGAACTCTCTaGAATTCTAGGGAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: IFWVNGYHAPWRNQNSSKHNRTL*NSRESY
Trigger: ATAGCTCTCCCTAGAATTTCAGAGAGTTCTGTTATG...CTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554864.7
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATTCATCAAGCCGGTTTaGACTCTCAAGCATGCGTGC +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIFIKPV*TLKHAC
Trigger: GCACGCATGCTTGAGAGTTCAAACCGGCTTGATGAA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556414.7
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLATGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ACAGAAAGAAATGTGAGCTTTAAACAACACAACTGTGGTTCACAGAGAACATTCACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TERNVSFKQHNCGSQRTFTGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...GAATGTTCTCTGTGAACCACAGTTGTGTTGTTTAAAGCTCACATTTCTTTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAAGCTTTATGAGGGAATaGTCTTCAGCCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVISFMRE*SSATGL
Trigger: CAGCCCTGTGGCTGAAGAGCATTCCCTCATAAAGCT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269192.11
ENST00000556414.7
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKISCLC*LFASMV
Trigger: CACCATCGATGCGAATAAGCAGCAAAGGCAGCTGAT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp ATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAAGCTCAGCAATCAGCTaGCTTTGCTGCTTATTCGCA +
Preference number: 4 (lower is better)
Translates to: INRLSALMEMDVQFIVEQSSAIS*LCCLFA
Trigger: TGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCT...TTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGAGCTCAGCAATCAGCTaGCTTTGCTGCTTATTCGCA +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKSSAIS*LCCLFA
Trigger: TGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp AAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAACTCAAACTGAGTCCGTaGAAATTCAGAATCCACATT +
Preference number: 4 (lower is better)
Translates to: KATCRTPGGQLRQSTFRKLKLSP*KFRIHI
Trigger: AATGTGGATTCTGAATTTGCACGGACTCAGTTTGAG...TTTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCTCAAACTGAGTCCGTaGAAATTCAGAATCCACATT +
Preference number: 4 (lower is better)
Translates to: NPFFTISSTTPSDQPNLPLKLSP*KFRIHI
Trigger: AATGTGGATTCTGAATTTGCACGGACTCAGTTTGAG...GGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTTTTCGGGCATGGATTTaGGCTAGAAAAGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSFRAWI*ARKAFS
Trigger: TGAAAAGGCTTTTCTAGCGCAAATCCATGCCCGAAA...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACTGCACATAGGGATCTaGATCCTCCGTAACCATGTC +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVILHIGI*ILRNHV
Trigger: GACATGGTTACGGAGGATGCAGATCCCTATGTGCAG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTAGCTCATTCTCCAGCTaGCGGACAGAGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: MCNSLWNKKETTPARCSCSSFSS*RTESFS
Trigger: TGAAAATGACTCTGTCCGGCAGCTGGAGAATGAGCT...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCCAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: PQNRNRRPISVVTERNVSQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...GCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR GCA 90 bp TTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCTTCTCAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LSSVFGSRLFRAFSRNASQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...AGAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACTGAACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS-3UTR GCA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACACAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp GAAATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACTTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: EIIIFWVNGYHAPWRNQNLSPHL*KQLSSF
Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...GTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR GCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTTTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFLSPHL*KQLSSF
Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR GCA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNLSPHL*KQLSSF
Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp CATTTAGTGTACACAGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: HLVYTALLNSTLKTETVGKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...GCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCTGTGTACACTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR GCA 90 bp GTGCAAAAATCCCAACTCAACTTAGAAGAGCCTGTCTCCTTTCACATGACCACACCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: VQKSQLNLEEPVSFHMTTPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...TGTGGTCATGTGAAAGGAGACAGGCTCTTCTAAGTTGAGTTGGGATTTTTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR GCA 90 bp AACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCTTTAAATTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: NRNRRPISVVTERNVSFKFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...TTTAAAGCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGTTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKTFASR*RRGNQT
Trigger: GGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGTCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKSFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTATCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLSFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp CAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAGTCAACTACAGACCGTaGAGGCCAAGGACCCTTCTT +
Preference number: 4 (lower is better)
Translates to: QRLLDLQDLSTVNSQELIVNYRP*RPRTLL
Trigger: AAGAAGGGTCCTTGGCCTGCACGGTCTGTAGTTGAC...TATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTGCTGTGTTAGACCAGTaGTTATTAACAGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSAVLDQ*LLTGYQ
Trigger: CTGATAGCCTGTTAATAAGCACTGGTCTAACACAGC...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATTCACTTGTGGCTCCTTaGGTGGAATCGAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: IHCGTRKKQPPQDVVVSNSLVAP*VESNQG
Trigger: CCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGA...ATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATTTAAATGCACCAACATaGCCCTTAATTCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LFPESHAVDFTFLPSSINLNAPT*PLILPL
Trigger: CAGAGGAAGAATTAAGGGGCATGTTGGTGCATTTAA...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679796.1
ENST00000680822.1
CDS-3UTR GCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGGTTAGCTTCTGAGTaGTGTGGGTTTTGGGATGAC +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLRLASE*CGFWDD
Trigger: GTCATCCCAAAACCCACAGCACTCAGAAGCTAACCT...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGAGGTTAGCTTCTGAGTaGTGTGGGTTTTGGGATGAC +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKRLASE*CGFWDD
Trigger: GTCATCCCAAAACCCACAGCACTCAGAAGCTAACCT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp GTTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCTTCTGTTGGATTTGTAACTaGACAAAGGTCACAATTCCA +
Preference number: 4 (lower is better)
Translates to: VEFSVWVQVVQSIFPQCFCWICN*TKVTIP
Trigger: TGGAATTGTGACCTTTGTGCAGTTACAAATCCAACA...GAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACTGAACTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS-3UTR CCA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTGCTGATCTGGGAACATaGGGTGCAAAGGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFADLGT*GAKVHG
Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACAGAAAGAAATGTGAGCTTTAAACAACACAACTGTGGTTCACAGAGAACATTCGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: TERNVSFKQHNCGSQRTFVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...GAATGTTCTCTGTGAACCACAGTTGTGTTGTTTAAAGCTCACATTTCTTTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CCA 90 bp ATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: IHCGTRKKQPPQDVVVSNVSQVE*LLRLIW
Trigger: CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC...ATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTCTACTTCACTGTCCTTaGGAGGAGAGCGTGCACCGT +
Preference number: 4 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFLLHCP*EESVHR
Trigger: ACGGTGCACGCTCTCCTCCCAAGGACAGTGAAGTAG...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679678.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGCCTTGCCGCATACCTaGCAATTAGCCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIALPHT*QLACVL
Trigger: AAGAACACAGGCTAATTGCCAGGTATGCGGCAAGGC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACCATTGAGCACTTAATATTTGCAGAATACATGGCTAGATGCAGAGGATTCAAAGTGCCTTCTCTGGCGTaGGCTGAGAAGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: TIEHLIFAEYMARCRGFKVPSLA*AEKLVH
Trigger: ATGAACAAGCTTCTCAGCCCACGCCAGAGAAGGCAC...TTTGAATCCTCTGCATCTAGCCATGTATTCTGCAAATATTAAGTGCTCAATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGTGCCTTCTCTGGCGTaGGCTGAGAAGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAVPSLA*AEKLVH
Trigger: ATGAACAAGCTTCTCAGCCCACGCCAGAGAAGGCAC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLASLRLS*RADILC
Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAAGATGGGCATGGGAATTaGCCTGCTGATGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKDGHGN*PADGVA
Trigger: AGCCACACCATCAGCAGGCCAATTCCCATGCCCATC...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACCAGGTTTTCGGGCATaGATTTGCGCTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIPGFRA*ICARKA
Trigger: GGCTTTTCTAGCGCAAATCCATGCCCGAAAACCTGG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATCCAGGTTTTCGGGCATaGATTTGCGCTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDPGFRA*ICARKA
Trigger: GGCTTTTCTAGCGCAAATCCATGCCCGAAAACCTGG...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAAGGTATTCCTCCATCTaGAGCTCATTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIRYSSI*SSFSSC
Trigger: GCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ATTCCATATGTCCACCAGGTGCAAATTGCATTTCTTCTGAACAAACCTAAGCTTATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA +
Preference number: 4 (lower is better)
Translates to: IPYVHQVQIAFLLNKPKLMLFCR*RVGCDP
Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...AAGCTTAGGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGGACATATGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIMLFCR*RVGCDP
Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR CCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGACTGAAATTTTACCATaGCCTTCCGGATCAAACGCT +
Preference number: 4 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKTEILP*PSGSNA
Trigger: AGCGTTTGATCCGGAAGGCCATGGTAAAATTTCAGT...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp ATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCACTGAAATTTTACCATaGCCTTCCGGATCAAACGCT +
Preference number: 4 (lower is better)
Translates to: IIIFWVNGYHAPWRNQNSTEILP*PSGSNA
Trigger: AGCGTTTGATCCGGAAGGCCATGGTAAAATTTCAGT...GCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CCA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAAACCATCACCCCACTaGAGTCAGAAATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKKPSPH*SQKSLR
Trigger: TCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTT...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTAAACCATCACCCCACTaGAGTCAGAAATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSKPSPH*SQKSLR
Trigger: TCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTT...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp AACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCTTTAAAGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: NRNRRPISVVTERNVSFKGRNRI*LTVLCN
Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...TTTAAAGCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKGRNRI*LTVLCN
Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp CTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: LDLQDLSTVNSQELIRVDGRNRI*LTVLCN
Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...GTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLGRNRI*LTVLCN
Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp CCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAAGAATGGATTATTCCTaGTGTGTTTGGTTCAAGTCA +
Preference number: 4 (lower is better)
Translates to: PLIWRCGGGLAVLDQCLLRMDYS*CVWFKS
Trigger: TGACTTGAACCAAACACACCAGGAATAATCCATTCT...TAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAAAGAATGGATTATTCCTaGTGTGTTTGGTTCAAGTCA +
Preference number: 4 (lower is better)
Translates to: LSSKDSGVLTCGSLRGIERMDYS*CVWFKS
Trigger: TGACTTGAACCAAACACACCAGGAATAATCCATTCT...TTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAATCTTATGGCACCTGTaGTTTATAAACAGCTTTAGT +
Preference number: 4 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPILWHL*FINSFS
Trigger: ACTAAAGCTGTTTATAAACCACAGGTGCCATAAGAT...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCAGAGGAACAAGACCATaGAAGAGCAGAGATAACTTT +
Preference number: 4 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFRGTRP*KSRDNF
Trigger: AAAGTTATCTCTGCTCTTCCATGGTCTTGTTCCTCT...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACTCTAAAGAGGGTCCTTaGAAAAGACTATCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNSKEGP*KRLSQS
Trigger: AGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGA...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AAATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCCAAGGCAAGTGATTTaGTTTCAAAGGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: KSICAKKSENCAVVPLWCPRQVI*FQRAAK
Trigger: CTTGGCTGCCCTTTGAAACCAAATCACTTGCCTTGG...ACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGTGGTTAGTCAGAAATTaGTCATTGGCGGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKWLVRN*SLAAVS
Trigger: GGAAACTGCCGCCAATGACCAATTTCTGACTAACCA...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCGCAACCAAAGGTTGCTaGATTTACAAGATCTATCTA +
Preference number: 4 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTATKGC*IYKIYL
Trigger: TAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAAATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACCTATTTATCTTGGAATaGACGGGCGCTTCAGTCACT +
Preference number: 4 (lower is better)
Translates to: EIIIFWVNGYHAPWRNQNLFILE*TGASVT
Trigger: AGTGACTGAAGCGCCCGTCCATTCCAAGATAAATAG...GTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315456.10
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGATGCTGGTTACAGGTCTaGGAGGCCAAGTATCAACGA +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRCWLQV*EAKYQR
Trigger: TCGTTGATACTTGGCCTCCCAGACCTGTAACCAGCA...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGAGTGCTGTGGGTTTTaGGATGACATGAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRECCGF*DDMNLR
Trigger: CCTGAGGTTCATGTCATCCCAAAACCCACAGCACTC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
3UTR CAA 72 bp TATTTCGAAGACCTTCCTAAGTGTTGCAGATGCTGCTaGTCCGGGGAACACACTTTGAGAACTATTGTTCTA +
Preference number: 4 (lower is better)
Translates to: YFEDLPKCCRCC*SGEHTLRTIVL
Trigger: TAGAACAATAGTTCTCAAAGTGTGTTCCCCGGACAAGCAGCATCTGCAACACTTAGGAAGGTCTTCGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGATATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCA +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVISLVAS*DPPTGP
Trigger: TGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATTCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCA +
Preference number: 4 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDSLVAS*DPPTGP
Trigger: TGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGA...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACCTTTTCAGAGGTTGGTaGGGGAACAAGATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LDLQDLSTVNSQELIRVDLFRGW*GNKILK
Trigger: TTTGAGGATCTTGTTCCCTCACCAACCTCTGAAAAG...GTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ATTCCATATGTCCACCAGGTGCAAATTGCATTTCTTCTGAACAAACCTAAGCTTCCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: IPYVHQVQIAFLLNKPKLPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...AAGCTTAGGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGGACATATGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS-3UTR TCA 90 bp GTGTATTGGAAATACAATAGCAATACCCCATGTATGCATTCATGGGCAATTATACTAAGCGGGACACGTTaGGTTCAGTGTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: VYWKYNSNTPCMHSWAIILSGTR*VQCLGP
Trigger: TGGACCCAAACACTGAACTCAACGTGTCCCGCTTAG...TATAATTGCCCATGAATGCATACATGGGGTATTGCTATTGTATTTCCAATACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR TCA 90 bp TTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACATCTTAATTTGTCCATaGTCTTCCCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: FKNPFFTISSTTPSDQPNILICP*SSLHTM
Trigger: CATTGTGTGGAGGGAAGATCATGGACAAATTAAGAT...GTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTCTGCCGTGGGTAGTTTaGGAACTTCCCGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLALPWVV*ELPEGI
Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAG...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR TCA 90 bp AACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCTTTAAAGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: NRNRRPISVVTERNVSFKETGSG*LFCVTK
Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...TTTAAAGCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKETGSG*LFCVTK
Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp AGAGTCCTTGCAATGGCTTTATATGACGATATCAACAACCATGTGATGGAGTTGGCAGGATTTAAGTTCTaGGTTCAAGAACTACCTGGC +
Preference number: 4 (lower is better)
Translates to: RVLAMALYDDINNHVMELAGFKF*VQELPG
Trigger: GCCAGGTAGTTCTTGAACTCAGAACTTAAATCCTGC...CAACTCCATCACATGGTTGTTGATATCGTCATATAAAGCCATTGCAAGGACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTACCACAACTGTTTCCTaGATCCCATGCAGTAGATTT +
Preference number: 4 (lower is better)
Translates to: PVLINRLSALMEMDVQFITTTVS*IPCSRF
Trigger: AAATCTACTGCATGGGATTCAGGAAACAGTTGTGGT...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATCAGTGCTAAATTATaGTGCAACAGTTTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LFPESHAVDFTFLPSSINISAKL*CNSLAH
Trigger: ATGAGCCAAACTGTTGCATCATAATTTAGCACTGAT...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAAATCAGTGCTAAATTATaGTGCAACAGTTTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: KATCRTPGGQLRQSTFRKISAKL*CNSLAH
Trigger: ATGAGCCAAACTGTTGCATCATAATTTAGCACTGAT...TTTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGACAAGTATCAACGATGTaGGCCAAGTTGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRQVSTM*AKLSGF
Trigger: GAAGCCACTCAACTTGGCTCACATCGTTGATACTTG...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
CDS-3UTR TCA 90 bp ACCATTGAGCACTTAATATTTGCAGAATACATGGCTAGATGCAGAGGATTCAAACCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCA +
Preference number: 4 (lower is better)
Translates to: TIEHLIFAEYMARCRGFKPLVAS*DPPTGP
Trigger: TGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGG...TTTGAATCCTCTGCATCTAGCCATGTATTCTGCAAATATTAAGTGCTCAATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR TCA 90 bp TTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACCATAACAGAACTCTCTaGAATTCTAGGGAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: FKNPFFTISSTTPSDQPNHNRTL*NSRESY
Trigger: ATAGCTCTCCCTAGAATTTCAGAGAGTTCTGTTATG...GTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
CDS-3UTR TCA 90 bp ATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGTGCTGACGTGGAGTTaGGAGGAGTGTGATAAAAGG +
Preference number: 4 (lower is better)
Translates to: IHCGTRKKQPPQDVVVSNVLTWS*EECDKR
Trigger: CCTTTTATCACACTCCTCTCAACTCCACGTCAGCAC...ATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
CDS-3UTR GCA 90 bp ATTGAGCACTTAATATTTGCAGAATACATGGCTAGATGCAGAGGATTCAAAGAAACAGGGTGTCGTTCATaGTGGTTACAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: IEHLIFAEYMARCRGFKETGCRS*WLQVWE
Trigger: CTCCCAGACCTGTAACCAGCATGAACGACACCCTGT...TTCTTTGAATCCTCTGCATCTAGCCATGTATTCTGCAAATATTAAGTGCTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIISCLC*LFASMV
Trigger: CACCATCGATGCGAATAAGCAGCAAAGGCAGCTGAT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAAGCTCAGCAATCAGCTaGCTTTGCTGCTTATTCGCA +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVISSAIS*LCCLFA
Trigger: TGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAAGCTCAGCAATCAGCTaGCTTTGCTGCTTATTCGCA +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRSSAIS*LCCLFA
Trigger: TGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp AAAGAAAACAACCTCGAGTTGGAAAGAGGCCCCAAAGAATGGATTATTCCTGGTTTTCGGGCATGGATTTaGGCTAGAAAAGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: KENNLELERGPKEWIIPGFRAWI*ARKAFS
Trigger: TGAAAAGGCTTTTCTAGCGCAAATCCATGCCCGAAA...ACCAGGAATAATCCATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCTTTCGGGCATGGATTTaGGCTAGAAAAGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSFRAWI*ARKAFS
Trigger: TGAAAAGGCTTTTCTAGCGCAAATCCATGCCCGAAA...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTCTGCACATAGGGATCTaGATCCTCCGTAACCATGTC +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLALHIGI*ILRNHV
Trigger: GACATGGTTACGGAGGATGCAGATCCCTATGTGCAG...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAAGCTCATTCTCCAGCTaGCGGACAGAGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVISSFSS*RTESFS
Trigger: TGAAAATGACTCTGTCCGGCAGCTGGAGAATGAGCT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTCAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACCAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp AAATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTTTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KSICAKKSENCAVVPLWCLSPHL*KQLSSF
Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...ACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR GCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTATTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLLSPHL*KQLSSF
Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGTTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKLSPHL*KQLSSF
Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp CAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCTTTCCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: QNRNRRPISVVTERNVSFPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...AAAGCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR GCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTCCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR GCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGATTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRTFASR*RRGNQT
Trigger: GGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGATCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRSFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTCAGCCTGTGTTTGTTTaGTTTTTAACCAGGGATGAA +
Preference number: 4 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTQPVFV*FLTRDE
Trigger: TTCATCCCTGGTTAAAAAGCAAACAAACACAGGCTG...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCATTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCACAGCCTGTGTTTGTTTaGTTTTTAACCAGGGATGAA +
Preference number: 4 (lower is better)
Translates to: SFKNPFFTISSTTPSDQPQPVFV*FLTRDE
Trigger: TTCATCCCTGGTTAAAAAGCAAACAAACACAGGCTG...TGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCCAGCTTTTCACTGAGTaGAAAAATCCCAACTCAACT +
Preference number: 4 (lower is better)
Translates to: IEPRGMQQPKVAGFTRSIQLFTE*KNPNST
Trigger: AGTTGAGTTGGGATTTTTGCACTCAGTGAAAAGCTG...GATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AAGTGTTGCAGATGCTGCTTGTCCGGGGAACACACTTTGAGAACTATTGTTCTACAGCTTTTCACTGAGTaGAAAAATCCCAACTCAACT +
Preference number: 4 (lower is better)
Translates to: KCCRCCLSGEHTLRTIVLQLFTE*KNPNST
Trigger: AGTTGAGTTGGGATTTTTGCACTCAGTGAAAAGCTG...TAGAACAATAGTTCTCAAAGTGTGTTCCCCGGACAAGCAGCATCTGCAACACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGCTGTGTTAGACCAGTaGTTATTAACAGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: PVLINRLSALMEMDVQFIAVLDQ*LLTGYQ
Trigger: CTGATAGCCTGTTAATAAGCACTGGTCTAACACAGC...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCGCTGTGTTAGACCAGTaGTTATTAACAGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVAVLDQ*LLTGYQ
Trigger: CTGATAGCCTGTTAATAAGCACTGGTCTAACACAGC...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTGCAGCAACCAAAGGTTaGTGGATTTACAAGATCTAT +
Preference number: 4 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSAATKG*WIYKIY
Trigger: ATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAATCACTTGTGGCTCCTTaGGTGGAATCGAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKSLVAP*VESNQG
Trigger: CCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGA...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAAGGTTAGCTTCTGAGTaGTGTGGGTTTTGGGATGAC +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRRLASE*CGFWDD
Trigger: GTCATCCCAAAACCCACAGCACTCAGAAGCTAACCT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTAGCCTTTCAAGATCCTaGTGCCTGGGAAATGGCCTG +
Preference number: 4 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFSLSRS*CLGNGL
Trigger: CAGGCCATTTCCCAGGCAGCAGGATCTTGAAAGGCT...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFLLRLI*EHGVQR
Trigger: CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAG...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCTCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSSSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTTCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: GCAIHCGTRKKQPPQDVVSSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...AACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AAAGAAAACAACCTCGAGTTGGAAAGAGGCCCCAAAGAATGGATTATTCCTGGTTCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: KENNLELERGPKEWIIPGSSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...ACCAGGAATAATCCATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTCCAGGTTTTCGGGCATaGATTTGCGCTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAPGFRA*ICARKA
Trigger: GGCTTTTCTAGCGCAAATCCATGCCCGAAAACCTGG...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTAGGTATTCCTCCATCTaGAGCTCATTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLARYSSI*SSFSSC
Trigger: GCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCT...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp GGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATAGGAATATTTACTGAAATTTTACCATaGCCTTCCGGATCAAACGCT +
Preference number: 4 (lower is better)
Translates to: GTMHPGGTRTAQSIIGIFTEILP*PSGSNA
Trigger: AGCGTTTGATCCGGAAGGCCATGGTAAAATTTCAGT...AAATATTCCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CCA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACACTGAAATTTTACCATaGCCTTCCGGATCAAACGCT +
Preference number: 4 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNTEILP*PSGSNA
Trigger: AGCGTTTGATCCGGAAGGCCATGGTAAAATTTCAGT...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp GGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATAGGAATATTTAAACCATCACCCCACTaGAGTCAGAAATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: GTMHPGGTRTAQSIIGIFKPSPH*SQKSLR
Trigger: TCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTT...AAATATTCCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CCA 90 bp GAAATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAAACCATCACCCCACTaGAGTCAGAAATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: EIIIFWVNGYHAPWRNQNKPSPH*SQKSLR
Trigger: TCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTT...GTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRGRNRI*LTVLCN
Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp ATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCGAACACTCAACCGGATaGAAGACATTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: IEPRGMQQPKVAGFTRSIEHSTG*KTFSTF
Trigger: AAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTC...GATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGGAACACTCAACCGGATaGAAGACATTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKEHSTG*KTFSTF
Trigger: AAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTC...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTGAACACTCAACCGGATaGAAGACATTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTEHSTG*KTFSTF
Trigger: AAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTC...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCAAAACAACCTCGAGTTaGAAAGAGGCCCCAAAGAAT +
Preference number: 4 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSKTTSS*KEAPKN
Trigger: ATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTT...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTAAAACAACCTCGAGTTaGAAAGAGGCCCCAAAGAAT +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFKTTSS*KEAPKN
Trigger: ATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTT...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGAAAACAACCTCGAGTTaGAAAGAGGCCCCAAAGAAT +
Preference number: 4 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKKTTSS*KEAPKN
Trigger: ATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTT...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTAAAACAACCTCGAGTTaGAAAGAGGCCCCAAAGAAT +
Preference number: 4 (lower is better)
Translates to: GCAIHCGTRKKQPPQDVVKTTSS*KEAPKN
Trigger: ATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTT...AACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AAGTGTTGCAGATGCTGCTTGTCCGGGGAACACACTTTGAGAACTATTGTTCTAAGAGGAACAAGACCATaGAAGAGCAGAGATAACTTT +
Preference number: 4 (lower is better)
Translates to: KCCRCCLSGEHTLRTIVLRGTRP*KSRDNF
Trigger: AAAGTTATCTCTGCTCTTCCATGGTCTTGTTCCTCT...TAGAACAATAGTTCTCAAAGTGTGTTCCCCGGACAAGCAGCATCTGCAACACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ACCATTGAGCACTTAATATTTGCAGAATACATGGCTAGATGCAGAGGATTCAAAGAAGATGTCAGGACTTaGCTGGGCACCTACCAACTA +
Preference number: 4 (lower is better)
Translates to: TIEHLIFAEYMARCRGFKEDVRT*LGTYQL
Trigger: TAGTTGGTAGGTGCCCAGCCAAGTCCTGACATCTTC...TTTGAATCCTCTGCATCTAGCCATGTATTCTGCAAATATTAAGTGCTCAATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR CCA 90 bp ATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATCCATCTAGAGAGGTATaGGTTCACAGAGGATGGGCA +
Preference number: 4 (lower is better)
Translates to: IHCGTRKKQPPQDVVVSNPSREV*VHRGWA
Trigger: TGCCCATCCTCTGTGAACCCATACCTCTCTAGATGG...ATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCAGCATTATAGGTAGCTaGGATGTAGTGGTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: NPFFTISSTTPSDQPNLPSIIGS*DVVVFN
Trigger: ATTGAAAACCACTACATCCCAGCTACCTATAATGCT...GGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACAAGAGAGAGAAAAGGTaGCTGGTTAGTCAGAAATTG +
Preference number: 4 (lower is better)
Translates to: FKNPFFTISSTTPSDQPNKREKR*LVSQKL
Trigger: CAATTTCTGACTAACCAGCCACCTTTTCTCTCTCTT...GTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCCAAAACGAGAGGAACAAGACCATGGAAGAGCAGAGATAACTTTAGTCCGTTTAAGAGAGAGAAAAGGTaGCTGGTTAGTCAGAAATTG +
Preference number: 4 (lower is better)
Translates to: AKTRGTRPWKSRDNFSPFKREKR*LVSQKL
Trigger: CAATTTCTGACTAACCAGCCACCTTTTCTCTCTCTT...AAACGGACTAAAGTTATCTCTGCTCTTCCATGGTCTTGTTCCTCTCGTTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TATTTGGACAGCATTTGTTTATTTCCTTGCAGAACCGCCTCTATAGGGCTGGGACCATGTATGCATTCATaGGCAATTATACAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: YLDSICLFPCRTASIGLGPCMHS*AIIQAV
Trigger: TACAGCCTGTATAATTGCCCATGAATGCATACATGG...TCCCAGCCCTATAGAGGCGGTTCTGCAAGGAAATAAACAAATGCTGTCCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp GGATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGCTATTTTGCCTCGGTaGCTCAATATTCCATCAATG +
Preference number: 4 (lower is better)
Translates to: GCAIHCGTRKKQPPQDVVAILPR*LNIPSM
Trigger: CATTGATGGAATATTGAGCCACCGAGGCAAAATAGC...AACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR CCA 90 bp ATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAACACAGTACCACACATaGGGTCTAGGAAATTGGAAG +
Preference number: 4 (lower is better)
Translates to: INRLSALMEMDVQFIVEQTQYHT*GLGNWK
Trigger: CTTCCAATTTCCTAGACCCCATGTGTGGTACTGTGT...TTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
3UTR CAA 72 bp AAGTGTTGCAGATGCTGCTTGTCCGGGGAACACACTTaGAGAACTATTGTTCTAAAATGTTCTCTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: KCCRCCLSGEHT*RTIVLKCSLLS
Trigger: AGAAAGGAGAGAACATTTTAGAACAATAGTTCTCAAAGTGTGTTCCCCGGACAAGCAGCATCTGCAACACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283365.13
ENST00000399121.9
ENST00000444659.5
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
3UTR CAA 72 bp GAGAAGTCTATATTTGGACAGCATTTGTTTATTTCCTaGCAGAACCGCCTCTATAGGGCTGGGATTGATAAG +
Preference number: 4 (lower is better)
Translates to: EKSIFGQHLFIS*QNRLYRAGIDK
Trigger: CTTATCAATCCCAGCCCTATAGAGGCGGTTCTGCAAGGAAATAAACAAATGCTGTCCAAATATAGACTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
3UTR CAA 72 bp ATGATCTTCCCTCCACACAATGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATTTTACCATGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: MIFPPHNVAKAI*TANTEILPWPS
Trigger: GGAAGGCCATGGTAAAATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCACATTGTGTGGAGGGAAGATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR TCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATATATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: QRLLDLQDLSTVNSQELIYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...TATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCA +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLASLVAS*DPPTGP
Trigger: TGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTACAAGATCCTCAAACTaGGTCCGTGCAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: MCNSLWNKKETTPARCSCTRSSN*VRANSE
Trigger: TTCTGAATTTGCACGGACTCAGTTTGAGGATCTTGT...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAACAAGATCCTCAAACTaGGTCCGTGCAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: INRLSALMEMDVQFIVEQTRSSN*VRANSE
Trigger: TTCTGAATTTGCACGGACTCAGTTTGAGGATCTTGT...TTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACTTTTCAGAGGTTGGTaGGGGAACAAGATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVILFRGW*GNKILK
Trigger: TTTGAGGATCTTGTTCCCTCACCAACCTCTGAAAAG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GTGTATTGGAAATACAATAGCAATACCCCATGTATGCATTCATGGGCAATTATAATGCGATCCAGATCTTaGGCCCTCATCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: VYWKYNSNTPCMHSWAIIMRSRS*ALISAN
Trigger: GTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCAT...TATAATTGCCCATGAATGCATACATGGGGTATTGCTATTGTATTTCCAATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR TCA 90 bp GAAAGAAATGTGAGCTTTAAACAACACAACTGTGGTTCACAGAGAACATTCCAACCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: ERNVSFKQHNCGSQRTFQPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...TTGGAATGTTCTCTGTGAACCACAGTTGTGTTGTTTAAAGCTCACATTTCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp ACAGAAAGAAATGTGAGCTTTAAACAACACAACTGTGGTTCACAGAGAACATTCCCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TERNVSFKQHNCGSQRTFPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...GAATGTTCTCTGTGAACCACAGTTGTGTTGTTTAAAGCTCACATTTCTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRETGSG*LFCVTK
Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTTCATCAAGCCGGTTTaGACTCTCAAGCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAFIKPV*TLKHAP
Trigger: AGGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATTTCATCAAGCCGGTTTaGACTCTCAAGCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: IHCGTRKKQPPQDVVVSNFIKPV*TLKHAP
Trigger: AGGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAA...ATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACTTTTTAACCAGGGATaGACCACGTTACAGAGGATG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVILFNQG*TTLQRM
Trigger: CATCCTCTGTAACGTGGTTCATCCCTGGTTAAAAAG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCCAAAACGAGAGGAACAAGACCATGGAAGAGCAGAGATAACTTTAGTCCGTTTATTCTTCAGGGTTATTaGATGATTGCAAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: AKTRGTRPWKSRDNFSPFILQGY*MIASGC
Trigger: ACAACCACTTGCAATCATTCAATAACCCTGAAGAAT...AAACGGACTAAAGTTATCTCTGCTCTTCCATGGTCTTGTTCCTCTCGTTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACCTGATTAGAGTATCTTaGAAGAAAACAACCTCGAGT +
Preference number: 4 (lower is better)
Translates to: FKNPFFTISSTTPSDQPNLIRVS*KKTTSS
Trigger: ACTCGAGGTTGTTTTCTTTCAAGATACTCTAATCAG...GTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTACTTTCTTGCTTATTCTaGATAAGGCCTTTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLLSCLF*IRPFQR
Trigger: TCTCTGAAAAGGCCTTATTCAGAATAAGCAAGAAAG...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATATCAACAACCATGTaGTGGAGTTGGTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: MCNSLWNKKETTPARCSCISTTM*WSWLAM
Trigger: CATTGCCAACCAACTCCATCACATGGTTGTTGATAT...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCATTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCATGCAATGGCTTTATATaGCGATATCAACAACCATGT +
Preference number: 4 (lower is better)
Translates to: SFKNPFFTISSTTPSDQPCNGFI*RYQQPC
Trigger: ACATGGTTGTTGATATCGTCATATAAAGCCATTGCA...TGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp ATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATAATGGACAGGACAAGTaGAACTTGCTGGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: IHCGTRKKQPPQDVVVSNNGQDK*NLLGLH
Trigger: GTGCAAACCCAGCAAGTTTCACTTGTCCTGTCCATT...ATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AAGTGTTGCAGATGCTGCTTGTCCGGGGAACACACTTTGAGAACTATTGTTCTAATCAGTGCTAAATTATaGTGCAACAGTTTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: KCCRCCLSGEHTLRTIVLISAKL*CNSLAH
Trigger: ATGAGCCAAACTGTTGCATCATAATTTAGCACTGAT...TAGAACAATAGTTCTCAAAGTGTGTTCCCCGGACAAGCAGCATCTGCAACACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTCCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCA +
Preference number: 4 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFPLVAS*DPPTGP
Trigger: TGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGG...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
CDS-3UTR TCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAAGCTAAGACTGGTTTaGAACTTATACCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLKLRLV*NLYLWG
Trigger: TCCCCAGAGGTATAAGTTTCAAACCAGTCTTAGCTT...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTGTAGAGGTTAGCTTCTaGGTGCTGTGGGTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFVEVSF*VLWVLG
Trigger: TCCCAAAACCCACAGCACTCAGAAGCTAACCTCTAC...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATGTACTGTATCCCTTTaGCCTTCAGAAAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVICTVSL*PSEKLE
Trigger: CTCCAGCTTTTCTGAAGGGCAAAGGGATACAGTACA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269192.11
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAISCLC*LFASMV
Trigger: CACCATCGATGCGAATAAGCAGCAAAGGCAGCTGAT...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATATCAGCTGCCTTTGCTaGTTATTCGCATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: IHCGTRKKQPPQDVVVSNISCLC*LFASMV
Trigger: CACCATCGATGCGAATAAGCAGCAAAGGCAGCTGAT...ATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTAGCTCATTCTCCAGCTaGCGGACAGAGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLASSFSS*RTESFS
Trigger: TGAAAATGACTCTGTCCGGCAGCTGGAGAATGAGCT...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp ATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATAGCTCATTCTCCAGCTaGCGGACAGAGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: IHCGTRKKQPPQDVVVSNSSFSS*RTESFS
Trigger: TGAAAATGACTCTGTCCGGCAGCTGGAGAATGAGCT...ATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTCAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: PVLINRLSALMEMDVQFIQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTCAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR GCA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTCCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: MCNSLWNKKETTPARCSCPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTACCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTTCCGGATCAAACGCTaGAAGCAGGAAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAFRIKR*KQEVKE
Trigger: CTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLATFASR*RRGNQT
Trigger: GGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGT...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR GCA 90 bp ATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATACATTTGCTAGTCGATaGAGAAGAGGCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: IHCGTRKKQPPQDVVVSNTFASR*RRGNQT
Trigger: GGTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGT...ATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp GAAAGAAATGTGAGCTTTAAACAACACAACTGTGGTTCACAGAGAACATTCCAATCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: ERNVSFKQHNCGSQRTFQSFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...TTGGAATGTTCTCTGTGAACCACAGTTGTGTTGTTTAAAGCTCACATTTCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLASFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
CDS-3UTR GCA 90 bp CAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATATCATTTGGTGCTGGTTaGTATGAGAACCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: QRLLDLQDLSTVNSQELISFGAG*YENHRH
Trigger: ATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGA...TATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp ATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGCTGTGTTAGACCAGTaGTTATTAACAGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: INRLSALMEMDVQFIVEQAVLDQ*LLTGYQ
Trigger: CTGATAGCCTGTTAATAAGCACTGGTCTAACACAGC...TTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCGCAGCAACCAAAGGTTaGTGGATTTACAAGATCTAT +
Preference number: 4 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSAATKG*WIYKIY
Trigger: ATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTGGTTTTGTAGTTAAATaGACCAACATGCCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTGFVVK*TNMPLN
Trigger: ATTAAGGGGCATGTTGGTGCATTTAACTACAAAACC...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000679796.1
ENST00000680822.1
CDS-3UTR GCA 90 bp TCATTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAGGTTTTGTAGTTAAATaGACCAACATGCCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: SFKNPFFTISSTTPSDQPGFVVK*TNMPLN
Trigger: ATTAAGGGGCATGTTGGTGCATTTAACTACAAAACC...TGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000679796.1
ENST00000680822.1
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTCTCAAGCATGCCTTTaGCCTTCAGAAAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLASQACL*PSEKLE
Trigger: CTCCAGCTTTTCTGAAGGGCAAAGGCATGCTTGAGA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591182.5
CDS-3UTR CCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTATCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLSSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTTCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: MCNSLWNKKETTPARCSCSSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp ATTGAGCACTTAATATTTGCAGAATACATGGCTAGATGCAGAGGATTCAAAGAACCAGGTTTTCGGGCATaGATTTGCGCTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: IEHLIFAEYMARCRGFKEPGFRA*ICARKA
Trigger: GGCTTTTCTAGCGCAAATCCATGCCCGAAAACCTGG...TTCTTTGAATCCTCTGCATCTAGCCATGTATTCTGCAAATATTAAGTGCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR CCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAAATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA +
Preference number: 4 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKMLFCR*RVGCDP
Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA +
Preference number: 4 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFMLFCR*RVGCDP
Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLADLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR CCA 90 bp CAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: QRLLDLQDLSTVNSQELIDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...TATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGACTGAAATTTTACCATaGCCTTCCGGATCAAACGCT +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKTEILP*PSGSNA
Trigger: AGCGTTTGATCCGGAAGGCCATGGTAAAATTTCAGT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp CTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAAACACTGAAATTTTACCATaGCCTTCCGGATCAAACGCT +
Preference number: 4 (lower is better)
Translates to: LSALMEMDVQFIVEQERNTEILP*PSGSNA
Trigger: AGCGTTTGATCCGGAAGGCCATGGTAAAATTTCAGT...GTTTCTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp CTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACACTGAAATTTTACCATaGCCTTCCGGATCAAACGCT +
Preference number: 4 (lower is better)
Translates to: LDLQDLSTVNSQELIRVDTEILP*PSGSNA
Trigger: AGCGTTTGATCCGGAAGGCCATGGTAAAATTTCAGT...GTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAAACCATCACCCCACTaGAGTCAGAAATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLKPSPH*SQKSLR
Trigger: TCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTT...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp ACAGAAAGAAATGTGAGCTTTAAACAACACAACTGTGGTTCACAGAGAACATTCGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: TERNVSFKQHNCGSQRTFGRNRI*LTVLCN
Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...GAATGTTCTCTGTGAACCACAGTTGTGTTGTTTAAAGCTCACATTTCTTTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAGRNRI*LTVLCN
Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR CCA 90 bp CATTTAGTGTACACAGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCGAACACTCAACCGGATaGAAGACATTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: HLVYTALLNSTLKTETVGEHSTG*KTFSTF
Trigger: AAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTC...GCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCTGTGTACACTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CCA 90 bp AAAGAAAACAACCTCGAGTTGGAAAGAGGCCCCAAAGAATGGATTATTCCTGGTAGAGGAACAAGACCATaGAAGAGCAGAGATAACTTT +
Preference number: 4 (lower is better)
Translates to: KENNLELERGPKEWIIPGRGTRP*KSRDNF
Trigger: AAAGTTATCTCTGCTCTTCCATGGTCTTGTTCCTCT...ACCAGGAATAATCCATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AAATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTGAGAGAAAAGGTGGCTaGTTAGTCAGAAATTGGTCA +
Preference number: 4 (lower is better)
Translates to: KSICAKKSENCAVVPLWCERKGG*LVRNWS
Trigger: TGACCAATTTCTGACTAACCAGCCACCTTTTCTCTC...ACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTAGCAACCAAAGGTTGCTaGATTTACAAGATCTATCTA +
Preference number: 4 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLATKGC*IYKIYL
Trigger: TAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCTTTAAAAAATCCTATTTATCTTaGAATGGACGGGCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: NRNRRPISVVTERNVSFKKSYLS*NGRALQ
Trigger: CTGAAGCGCCCGTCCATTCCAAGATAAATAGGATTT...TTTAAAGCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000315456.10
CDS-3UTR CCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCATTTTGGTGAGCCATaGGGAACAAGGCTCAATAAT +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKHFGEP*GTRLNN
Trigger: ATTATTGAGCCTTGTTCCCCATGGCTCACCAAAATG...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTACATTTTGGTGAGCCATaGGGAACAAGGCTCAATAAT +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLHFGEP*GTRLNN
Trigger: ATTATTGAGCCTTGTTCCCCATGGCTCACCAAAATG...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGTAAGGATTCTGCTTTaGGGAAGAGCCAAAAAGATG +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKVRILL*GRAKKM
Trigger: CATCTTTTTGGCTCTTCCCCAAAGCAGAATCCTTAC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAATATTCGCATCGATGGTaGAAGAGATGTCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKYSHRW*KRCQEH
Trigger: GTGCTCCTGACATCTCTTTCACCATCGATGCGAATA...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAACAAGATCCTCAAACTaGGTCCGTGCAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVITRSSN*VRANSE
Trigger: TTCTGAATTTGCACGGACTCAGTTTGAGGATCTTGT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTCTTTTCAGAGGTTGGTaGGGGAACAAGATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLALFRGW*GNKILK
Trigger: TTTGAGGATCTTGTTCCCTCACCAACCTCTGAAAAG...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTATGCACTACAAATCTaGGAACAAAAAGTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNYALQI*EQKVSC
Trigger: GCAGCTAACTTTTTGTTCTCAGATTTGTAGTGCATA...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTCCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS-3UTR TCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAACCCGCAATGCTTCTATaGCATTCCATATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKPAMLL*HSICPP
Trigger: TGGTGGACATATGGAATGTCATAGAAGCATTGCGGG...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp AGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCTTTAAACAAATCTTAATTTGTCCATaGTCTTCCCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: RNRRPISVVTERNVSFKQILICP*SSLHTM
Trigger: CATTGTGTGGAGGGAAGATCATGGACAAATTAAGAT...TTGTTTAAAGCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR TCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAATCTTAATTTGTCCATaGTCTTCCCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLILICP*SSLHTM
Trigger: CATTGTGTGGAGGGAAGATCATGGACAAATTAAGAT...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAETGSG*LFCVTK
Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR TCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGCAGTGGAAAAGAGATaGACATTAAGACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAAVEKR*TLRHPN
Trigger: GTTGGGGTGTCTTAATGTTCATCTCTTTTCCACTGC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTTGCAATGGCTTTATATaGCGATATCAACAACCATGT +
Preference number: 4 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFCNGFI*RYQQPC
Trigger: ACATGGTTGTTGATATCGTCATATAAAGCCATTGCA...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp AATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATATCAGTGCTAAATTATaGTGCAACAGTTTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: NRTKGNAATKGCWIYKIYISAKL*CNSLAH
Trigger: ATGAGCCAAACTGTTGCATCATAATTTAGCACTGAT...ATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAAAGCTAAGACTGGTTTaGAACTTATACCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRKLRLV*NLYLWG
Trigger: TCCCCAGAGGTATAAGTTTCAAACCAGTCTTAGCTT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCTACAGACCATGGGAATaGAGGGTAAAAATGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFYRPWE*RVKMCP
Trigger: TGGACACATTTTTACCCTTCATTCCCATGGTCTGTA...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS-3UTR GCA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTGCAATCAGCTGCCTTTaGTGCTTATTCGCATCGATG +
Preference number: 4 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFAISCL*CLFASM
Trigger: CATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGC...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
CDS-3UTR GCA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTAGCTCAGCAATCAGCTaGCTTTGCTGCTTATTCGCA +
Preference number: 4 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFSSAIS*LCCLFA
Trigger: TGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCT...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
CDS-3UTR GCA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTCTCAAACTGAGTCCGTaGAAATTCAGAATCCACATT +
Preference number: 4 (lower is better)
Translates to: MCNSLWNKKETTPARCSCLKLSP*KFRIHI
Trigger: AATGTGGATTCTGAATTTGCACGGACTCAGTTTGAG...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATTTCGGGCATGGATTTaGGCTAGAAAAGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIFRAWI*ARKAFS
Trigger: TGAAAAGGCTTTTCTAGCGCAAATCCATGCCCGAAA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp AAAAGGGAAATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: KREIIIFWVNGYHAPWRNQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...GTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTATTTCCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR GCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTACAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp ACAGAAAGAAATGTGAGCTTTAAACAACACAACTGTGGTTCACAGAGAACATTCAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: TERNVSFKQHNCGSQRTFKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...GAATGTTCTCTGTGAACCACAGTTGTGTTGTTTAAAGCTCACATTTCTTTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR GCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGACCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGTTAAATGCACCAACATaGCCCTTAATTCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKLNAPT*PLILPL
Trigger: CAGAGGAAGAATTAAGGGGCATGTTGGTGCATTTAA...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTACTGTTAGTTAAGACCTaGAGTAGGGGACATAACTTA +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLLLVKT*SRGHNL
Trigger: TAAGTTATGTCCCCTACTGCAGGTCTTAACTAACAG...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAGCAATACCCCATGTATaGATTCATGGGCAATTATAC +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLAIPHV*IHGQLY
Trigger: GTATAATTGCCCATGAATGCATACATGGGGTATTGC...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGATTTGTTTATTTCCTTaGAGAACCGCCTCTATAGGG +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKICLFP*RTASIG
Trigger: CCCTATAGAGGCGGTTCTGCAAGGAAATAAACAAAT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAATACTAGACCTGGGATaGAAGGTAAGTTTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIILDLG*KVSLPF
Trigger: AAAGGGCAAACTTACCTTCCATCCCAGGTCTAGTAT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269192.11
ENST00000556414.7
ENST00000591182.5
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAATACTAGACCTGGGATaGAAGGTAAGTTTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRILDLG*KVSLPF
Trigger: AAAGGGCAAACTTACCTTCCATCCCAGGTCTAGTAT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597674.5
ENST00000679678.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVISSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGATCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRSSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAAGATTTGGTGAGTGGTTaGCATCCGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKDLVSG*HPFVEL
Trigger: CAGCTCAACAAACGGATGCCAACCACTCACCAAATC...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAACTGAAATTTTACCATaGCCTTCCGGATCAAACGCT +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVITEILP*PSGSNA
Trigger: AGCGTTTGATCCGGAAGGCCATGGTAAAATTTCAGT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR CCA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATACTGAAATTTTACCATaGCCTTCCGGATCAAACGCT +
Preference number: 4 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDTEILP*PSGSNA
Trigger: AGCGTTTGATCCGGAAGGCCATGGTAAAATTTCAGT...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAACTGAAATTTTACCATaGCCTTCCGGATCAAACGCT +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRTEILP*PSGSNA
Trigger: AGCGTTTGATCCGGAAGGCCATGGTAAAATTTCAGT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCAAACCATCACCCCACTaGAGTCAGAAATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFKPSPH*SQKSLR
Trigger: TCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTT...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS-3UTR CCA 90 bp AGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCTTTAAACAAGAACACTCAACCGGATaGAAGACATTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: RNRRPISVVTERNVSFKQEHSTG*KTFSTF
Trigger: AAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTC...TTGTTTAAAGCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGAACACTCAACCGGATaGAAGACATTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKEHSTG*KTFSTF
Trigger: AAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAGAACACTCAACCGGATaGAAGACATTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLEHSTG*KTFSTF
Trigger: AAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTC...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGAGAATGGATTATTCCTaGTGTGTTTGGTTCAAGTCA +
Preference number: 4 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKRMDYS*CVWFKS
Trigger: TGACTTGAACCAAACACACCAGGAATAATCCATTCT...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACATCTTATGGCACCTGTaGTTTATAAACAGCTTTAGT +
Preference number: 4 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNILWHL*FINSFS
Trigger: ACTAAAGCTGTTTATAAACCACAGGTGCCATAAGAT...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCAGCATTATAGGTAGCTaGGATGTAGTGGTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVSIIGS*DVVVFN
Trigger: ATTGAAAACCACTACATCCCAGCTACCTATAATGCT...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACGCAACCAAAGGTTGCTaGATTTACAAGATCTATCTA +
Preference number: 4 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNATKGC*IYKIYL
Trigger: TAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGACATTTTGGTGAGCCATaGGGAACAAGGCTCAATAAT +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRHFGEP*GTRLNN
Trigger: ATTATTGAGCCTTGTTCCCCATGGCTCACCAAAATG...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAGAAGAGCCAAAAAGATaGGACGTGAATAGTCAGTTA +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLEEPKR*DVNSQL
Trigger: TAACTGACTATTCACGTCCCATCTTTTTGGCTCTTC...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGTAAGGATTCTGCTTTaGGGAAGAGCCAAAAAGATG +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRVRILL*GRAKKM
Trigger: CATCTTTTTGGCTCTTCCCCAAAGCAGAATCCTTAC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTACAAGATCCTCAAACTaGGTCCGTGCAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLATRSSN*VRANSE
Trigger: TTCTGAATTTGCACGGACTCAGTTTGAGGATCTTGT...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAATCTTAATTTGTCCATaGTCTTCCCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIILICP*SSLHTM
Trigger: CATTGTGTGGAGGGAAGATCATGGACAAATTAAGAT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR TCA 90 bp AGAGTCCTTGCAATGGCTTTATATGACGATATCAACAACCATGTGATGGAGTTGTGCAATGGCTTTATATaGCGATATCAACAACCATGT +
Preference number: 4 (lower is better)
Translates to: RVLAMALYDDINNHVMELCNGFI*RYQQPC
Trigger: ACATGGTTGTTGATATCGTCATATAAAGCCATTGCA...CAACTCCATCACATGGTTGTTGATATCGTCATATAAAGCCATTGCAAGGACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGATTTCTCTCACAAAATTaGGCACATTTTGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRFLSQN*AHFGEP
Trigger: TGGCTCACCAAAATGTGCTCAATTTTGTGAGAGAAA...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR TCA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCTTTCTCTCACAAAATTaGGCACATTTTGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFFLSQN*AHFGEP
Trigger: TGGCTCACCAAAATGTGCTCAATTTTGTGAGAGAAA...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGACCTCTAAAATTCAATaGAGGGACAGCATGAACTTT +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKTSKIQ*RDSMNF
Trigger: AAAGTTCATGCTGTCCCTTCATTGAATTTTAGAGGT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679936.1
CDS-3UTR TCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGATGAGCAGTTGAGATaGCCTCTAAAATTCAATGAA +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKDEQLR*PLKFNE
Trigger: TTCATTGAATTTTAGAGGTCATCTCAACTGCTCATC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679936.1
CDS-3UTR TCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAATTAAAATGGACAGATaGGCAGTTGAGATGACCTCT +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRIKMDR*AVEMTS
Trigger: AGAGGTCATCTCAACTGCTCATCTGTCCATTTTAAT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679936.1
CDS-3UTR GCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACTCAAACTGAGTCCGTaGAAATTCAGAATCCACATT +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVILKLSP*KFRIHI
Trigger: AATGTGGATTCTGAATTTGCACGGACTCAGTTTGAG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTTTCGGGCATGGATTTaGGCTAGAAAAGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAFRAWI*ARKAFS
Trigger: TGAAAAGGCTTTTCTAGCGCAAATCCATGCCCGAAA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCCAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS-3UTR GCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGACAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAAAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKKPKLA*CSVGGE
Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTT...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp ACAGAAAGAAATGTGAGCTTTAAACAACACAACTGTGGTTCACAGAGAACATTCCCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: TERNVSFKQHNCGSQRTFPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...GAATGTTCTCTGTGAACCACAGTTGTGTTGTTTAAAGCTCACATTTCTTTCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR GCA 90 bp ATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATCCACCAGGTGCAAATTaGATTTCTTCTGAACAAACC +
Preference number: 4 (lower is better)
Translates to: IHCGTRKKQPPQDVVVSNPPGAN*ISSEQT
Trigger: GGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGG...ATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAACAAAGAAACAACATATaGCAGCTCGGTCCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKQRNNI*QLGPVS
Trigger: ACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTG...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCTTAAATGCACCAACATaGCCCTTAATTCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFLNAPT*PLILPL
Trigger: CAGAGGAAGAATTAAGGGGCATGTTGGTGCATTTAA...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS-3UTR GCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGGTTTTGTAGTTAAATaGACCAACATGCCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKGFVVK*TNMPLN
Trigger: ATTAAGGGGCATGTTGGTGCATTTAACTACAAAACC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAGGTTTTGTAGTTAAATaGACCAACATGCCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: DCGISLLREGSDQQLEKLGFVVK*TNMPLN
Trigger: ATTAAGGGGCATGTTGGTGCATTTAACTACAAAACC...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCCTGTTAGTTAAGACCTaGAGTAGGGGACATAACTTA +
Preference number: 4 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFLLVKT*SRGHNL
Trigger: TAAGTTATGTCCCCTACTGCAGGTCTTAACTAACAG...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTTGAACTCTCAAGCATaGCTTTGCCCTTCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLALNSQA*LCPSEK
Trigger: CTTTTCTGAAGGGCAAAGGCATGCTTGAGAGTTCAA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591182.5
CDS-3UTR CCA 90 bp ATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATAAACCATCACCCCACTaGAGTCAGAAATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: IHCGTRKKQPPQDVVVSNKPSPH*SQKSLR
Trigger: TCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTT...ATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTCGTTTGGGGATCTTATaGCACCTGTGGTTTATAAAC +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLARLGIL*HLWFIN
Trigger: GTTTATAAACCACAGGTGCCATAAGATCCCCAAACG...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAATGGTTAGTCAGAAATTaGTCATTGGCGGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKWLVRN*SLAAVS
Trigger: GGAAACTGCCGCCAATGACCAATTTCTGACTAACCA...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGTGAATAGTCAGTTATaGAGTACAGTCTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SDCGISLLREGSDQQLEKVNSQL*STVFLS
Trigger: TGAGAGAAAGACTGTACTCCATAACTGACTATTCAC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
3UTR CAA 72 bp ATGTTTTACCATGAGAAGTCTATATTTGGACAGCATTaGTTTATTTCCTTGCAGAACCGCCTCTATAGGGCT +
Preference number: 4 (lower is better)
Translates to: MFYHEKSIFGQH*FISLQNRLYRA
Trigger: AGCCCTATAGAGGCGGTTCTGCAAGGAAATAAACAAATGCTGTCCAAATATAGACTTCTCATGGTAAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR TCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATATGCACTACAAATCTaGGAACAAAAAGTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIYALQI*EQKVSC
Trigger: GCAGCTAACTTTTTGTTCTCAGATTTGTAGTGCATA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp GTGTATTGGAAATACAATAGCAATACCCCATGTATGCATTCATGGGCAATTATAAAGCTAAGACTGGTTTaGAACTTATACCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VYWKYNSNTPCMHSWAIIKLRLV*NLYLWG
Trigger: TCCCCAGAGGTATAAGTTTCAAACCAGTCTTAGCTT...TATAATTGCCCATGAATGCATACATGGGGTATTGCTATTGTATTTCCAATACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTCTCAAACTGAGTCCGTaGAAATTCAGAATCCACATT +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLALKLSP*KFRIHI
Trigger: AATGTGGATTCTGAATTTGCACGGACTCAGTTTGAG...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATACTCAAACTGAGTCCGTaGAAATTCAGAATCCACATT +
Preference number: 4 (lower is better)
Translates to: QRLLDLQDLSTVNSQELILKLSP*KFRIHI
Trigger: AATGTGGATTCTGAATTTGCACGGACTCAGTTTGAG...TATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAATTTCGGGCATGGATTTaGGCTAGAAAAGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKFRAWI*ARKAFS
Trigger: TGAAAAGGCTTTTCTAGCGCAAATCCATGCCCGAAA...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp CAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATACAGCTGTCTTCTTTCTaGCATGGTATTTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: QRLLDLQDLSTVNSQELIQLSSF*HGISSF
Trigger: AAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTG...TATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTCAGCCTGTGTTTGTTTaGTTTTTAACCAGGGATGAA +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAQPVFV*FLTRDE
Trigger: TTCATCCCTGGTTAAAAAGCAAACAAACACAGGCTG...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR GCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGGTTTTGTAGTTAAATaGACCAACATGCCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRGFVVK*TNMPLN
Trigger: ATTAAGGGGCATGTTGGTGCATTTAACTACAAAACC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000680346.1
ENST00000681274.1
CDS-3UTR GCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTAACCCTTTTCAATCATaGCTGTGGGGAAATGAAATG +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLANPFQS*LWGNEM
Trigger: CATTTCATTTCCCCACAGGCATGATTGAAAAGGGTT...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601125.5
CDS-3UTR CCA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTTCTAGCCGAAGTCTCTaGATCTCCTGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFSSRSL*ISCKIS
Trigger: AGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGA...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGAACACTCAACCGGATaGAAGACATTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAEHSTG*KTFSTF
Trigger: AAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR CCA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAAGAATGGATTATTCCTaGTGTGTTTGGTTCAAGTCA +
Preference number: 4 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIRMDYS*CVWFKS
Trigger: TGACTTGAACCAAACACACCAGGAATAATCCATTCT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATGCAACCAAAGGTTGCTaGATTTACAAGATCTATCTA +
Preference number: 4 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDATKGC*IYKIYL
Trigger: TAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp GTGTATTGGAAATACAATAGCAATACCCCATGTATGCATTCATGGGCAATTATACATTTTGGTGAGCCATaGGGAACAAGGCTCAATAAT +
Preference number: 4 (lower is better)
Translates to: VYWKYNSNTPCMHSWAIIHFGEP*GTRLNN
Trigger: ATTATTGAGCCTTGTTCCCCATGGCTCACCAAAATG...TATAATTGCCCATGAATGCATACATGGGGTATTGCTATTGTATTTCCAATACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGTGAATAGTCAGTTATaGAGTACAGTCTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: CGISLLREGSDQQLEKLRVNSQL*STVFLS
Trigger: TGAGAGAAAGACTGTACTCCATAACTGACTATTCAC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CCA 90 bp GTGTATTGGAAATACAATAGCAATACCCCATGTATGCATTCATGGGCAATTATAGTAAGGATTCTGCTTTaGGGAAGAGCCAAAAAGATG +
Preference number: 4 (lower is better)
Translates to: VYWKYNSNTPCMHSWAIIVRILL*GRAKKM
Trigger: CATCTTTTTGGCTCTTCCCCAAAGCAGAATCCTTAC...TATAATTGCCCATGAATGCATACATGGGGTATTGCTATTGTATTTCCAATACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CCA 90 bp GGTGATTTAGGAATTGCACCTTTCTTCTCTGCACCACGATTTCAGATGATAGTTCATTTAGTTCATTCCTaGAATCTTACAACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GDLGIAPFFSAPRFQMIVHLVHS*NLTTLF
Trigger: GAAAAGGGTTGTAAGATTCCAGGAATGAACTAAATG...AACTATCATCTGAAATCGTGGTGCAGAGAAGAAAGGTGCAATTCCTAAATCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681065.1
3UTR CAA 72 bp TATAGGGCTGGGATTGATAAGGTTCTGCTTTTAATTTaGACTGAGGTCAGTATAAGAAACAGCCACATGAAA +
Preference number: 4 (lower is better)
Translates to: YRAGIDKVLLLI*TEVSIRNSHMK
Trigger: TTTCATGTGGCTGTTTCTTATACTGACCTCAGTCAAAATTAAAAGCAGAACCTTATCAATCCCAGCCCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR TCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTATGCACTACAAATCTaGGAACAAAAAGTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAYALQI*EQKVSC
Trigger: GCAGCTAACTTTTTGTTCTCAGATTTGTAGTGCATA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAAATCTTAATTTGTCCATaGTCTTCCCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKILICP*SSLHTM
Trigger: CATTGTGTGGAGGGAAGATCATGGACAAATTAAGAT...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR TCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTATTTCAGATGATAGTTaGTTTGGGCTCAGAGAAACA +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAISDDS*FGLRET
Trigger: TGTTTCTCTGAGCCCAAATCAACTATCATCTGAAAT...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601125.5
CDS-3UTR GCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAAGCAGCAACCAAAGGTTaGTGGATTTACAAGATCTAT +
Preference number: 4 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKAATKG*WIYKIY
Trigger: ATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR TCA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAAATTCTTCAGGGTTATTaGATGATTGCAAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKILQGY*MIASGC
Trigger: ACAACCACTTGCAATCATTCAATAACCCTGAAGAAT...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTATCTTATGGCACCTGTaGTTTATAAACAGCTTTAGT +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAILWHL*FINSFS
Trigger: ACTAAAGCTGTTTATAAACCACAGGTGCCATAAGAT...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CCA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTCATTTAGTTCATTCCTaGAATCTTACAACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAHLVHS*NLTTLF
Trigger: GAAAAGGGTTGTAAGATTCCAGGAATGAACTAAATG...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601125.5
CDS CCA 90 bp GCTTCCCCGCTTGCCAGCATGTCAGCATGGTCCTTCCTCCCACCATaGTACATTAATCAGCCAGTGGGTGCCCCCGTCCTCCAGGGATGG +
Preference number: 5 (lower is better)
Translates to: ASPLASMSAWSFLPP*YINQPVGAPVLQGW
Trigger: CCATCCCTGGAGGACGGGGGCACCCACTGGCTGATTAATGTACCATGGTGGGAGGAAGGACCATGCTGACATGCTGGCAAGCGGGGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585446.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCTGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSCSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS CCA 90 bp CGGGTCCGCTGCCAGAGTTGTGGGTCATGTGGGCACAGCAGAGGCTaGCTGCTGCCAGTACCAGGGTTTCCTGAGGATCCTGAAACTATG +
Preference number: 5 (lower is better)
Translates to: RVRCQSCGSCGHSRG*LLPVPGFPEDPETM
Trigger: CATAGTTTCAGGATCCTCAGGAAACCCTGGTACTGGCAGCAGCCAGCCTCTGCTGTGCCCACATGACCCACAACTCTGGCAGCGGACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682923.1
CDS CCA 90 bp GAGTCCCAGGTGACTGGAGCTTCCCCGCTTGCCAGCATGTCAGCATaGTCCTTCCTCCCACCATGGTACATTAATCAGCCAGTGGGTGCC +
Preference number: 5 (lower is better)
Translates to: ESQVTGASPLASMSA*SFLPPWYINQPVGA
Trigger: GGCACCCACTGGCTGATTAATGTACCATGGTGGGAGGAAGGACCATGCTGACATGCTGGCAAGCGGGGAAGCTCCAGTCACCTGGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585446.1
ENST00000681241.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCAGCATGCATGAGGGGTaGTTCCGGAGCATGTTGACA +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSSMHEG*FRSMLT
Trigger: TGTCAACATGCTCCGGAACAACCCCTCATGCATGCT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269192.11
CDS-3UTR CAA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGCGTGGGCCCTGGTCCTaGGGTACCGACACCGCAGTA +
Preference number: 5 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRRGPWS*GTDTAV
Trigger: TACTGCGGTGTCGGTACCCAAGGACCAGGGCCCACG...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGGCGCCACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTATGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: WRHLGGTATVWLCASICLCSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...TAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTGGCGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCTTGTGCAAATGCCTCTaGTACATCTCCCCCTACTCC +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSLCKCL*YISPYS
Trigger: GGAGTAGGGGGAGATGTACAAGAGGCATTTGCACAA...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSTAVGS*RTSRRN
Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCACTGCTCACAGAGACTaGGAGTCAACTACAGACCGT +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSTAHRD*ESTTDR
Trigger: ACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAGT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCCCAAGGCAAGTGATTaGGTTTCAAAGGGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSPKASD*VSKGSQ
Trigger: TTGGCTGCCCTTTGAAACCAAATCACTTGCCTTGGG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTACGCTGTGGAGGAGGGTaGGCTGTGTTAGACCAGTGC +
Preference number: 5 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLRCGGG*AVLDQC
Trigger: GCACTGGTCTAACACAGCCAACCCTCCTCCACAGCG...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCGTGCAGGCCAAGGACCCTTCTTGGCTTCCGGGCTCTGAGTTTGTACACTCAGCTCACTTGTGGCTCCTaGCGTGGAATCGAACCAAGG +
Preference number: 5 (lower is better)
Translates to: PCRPRTLLGFRALSLYTQLTCGS*RGIEPR
Trigger: CCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAG...CTGAGTGTACAAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGCCTGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCTCTCAAGCATGCCTTaGCCCTTCAGAAAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSLSSMP*PFRKAG
Trigger: TCCAGCTTTTCTGAAGGGCAAAGGCATGCTTGAGAG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591182.5
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCGGATGGAAGGTAAGTTaGCCCTTTAATTCTGCCACC +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSGWKVS*PFNSAT
Trigger: GGTGGCAGAATTAAAGGGCAAACTTACCTTCCATCC...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269192.11
ENST00000591182.5
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCATG +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSLHQAG*NSQACM
Trigger: CATGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269192.11
CDS-3UTR CAA 90 bp TGGCGCCACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTAACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: WRHLGGTATVWLCASICLTLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...TAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTGGCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCAGCAATCAGCTGCCTTaGCTGCTTATTCGCATCGAT +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSSNQLP*LLIRID
Trigger: ATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACGCCATTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTTGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: TPFCLAYRTGVLESGLSACSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...AGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAATGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGTGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: PSSINMALWRRVGCVRPVCSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGATGTGAGCCAAGTTTGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: QGVVHAGYRSGRHDVSQVCSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...AACTTGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCAAGCCTTTTCAGAGGTaGGTGAGGGAACAAGATCCT +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSKPFQR*VREQDP
Trigger: AGGATCTTGTTCCCTCACCAACCTCTGAAAAGGCTT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCTGATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGTCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: ADLGTWGAKVHGWKHSSGSKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...CCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCGTAATTGTGACACTGTaGGCATCGGTAGCGAAATCC +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSVIVTL*ASVAKS
Trigger: GGATTTCGCTACCGATGCCAACAGTGTCACAATTAC...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
CDS-3UTR CAA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTCGCTGTGGAGGAGGGTaGGCTGTGTTAGACCAGTGC +
Preference number: 5 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVARCGGG*AVLDQC
Trigger: GCACTGGTCTAACACAGCCAACCCTCCTCCACAGCG...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGTCCCCCTGCTGGCTCTaGAGCCTGACCACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRSPCWL*SLTTGS
Trigger: TGAACCTGTGGTCAGGCTCAAGAGCCAGCAGGGGGA...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCCTT +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSLHQAG*NSQACL
Trigger: AAGGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591182.5
CDS TCA 90 bp GGAAGGAGCAGGCAGCAATCTCTGCTGTTCTGCAGCCTTCACTGGTaGTACCCAGGAAAACAGGGTCTGGAGTGGACCTCCAGCAAACTC +
Preference number: 5 (lower is better)
Translates to: GRSRQQSLLFCSLHW*YPGKQGLEWTSSKL
Trigger: GAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTTCCTGGGTATCACCAGTGAAGGCTGCAGAACAGCAGAGATTGCTGCCTGCTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682483.1
CDS GCA 90 bp CCTTCTGGGACGAAGCTTCCAGAGGAAGGAGCAGGCAGCAATCTCTaGTGTTCTGCAGCCTTCACTGGTGATACCCAGGAAAACAGGGTC +
Preference number: 5 (lower is better)
Translates to: PSGTKLPEEGAGSNL*CSAAFTGDTQENRV
Trigger: GACCCTGTTTTCCTGGGTATCACCAGTGAAGGCTGCAGAACAGCAGAGATTGCTGCCTGCTCCTTCCTCTGGAAGCTTCGTCCCAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682483.1
CDS CCA 90 bp TTCTCATACAGAATAGCTCTGGCTGGCATCTGGCAGGTGCCCTTCTaGGACGAAGCTTCCAGAGGAAGGAGCAGGCAGCAATCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: FSYRIALAGIWQVPF*DEASRGRSRQQSLL
Trigger: CAGCAGAGATTGCTGCCTGCTCCTTCCTCTGGAAGCTTCGTCCCAGAAGGGCACCTGCCAGATGCCAGCCAGAGCTATTCTGTATGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682483.1
CDS-3UTR CAA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCCSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYCSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR CAA 90 bp GTGGAGAGCACAGCCTCTAAGCGGGACACGTTGAGTTCAGTGTTTGGGTCCAGGGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: VESTASKRDTLSSVFGSRVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...CCTGGACCCAAACACTGAACTCAACGTGTCCCGCTTAGAGGCTGTGCTCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS-3UTR CAA 90 bp GTAGGTGGAGAGTCGGATGCGATCCAGATCTTGAGCCCTAGGCTCCTTGCTCTGGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: VGGESDAIQILSPRLLALVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...CAGAGCAAGGAGCCTAGGGCTCAAGATCTGGATCGCATCCGACTCTCCACCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS-3UTR CAA 90 bp AGGTCTGGGAGGCACGATGTGAGCCAAGTTGAGTGGCTTCTCAGGCTGATCTGGGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: RSGRHDVSQVEWLLRLIWVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...CCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CAA 90 bp CCGTGCAGGCCAAGGACCCTTCTTGGCTTCCGGGCTCTGAGTTTGTACACTCAGCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCTCC +
Preference number: 5 (lower is better)
Translates to: PCRPRTLLGFRALSLYTQLHQAG*NSQACS
Trigger: GGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...CTGAGTGTACAAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGCCTGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCGTGCAGGCCAAGGACCCTTCTTGGCTTCCGGGCTCTGAGTTTGTACACTCAGGTCAGAAATTGGTCATaGGCGGCAGTTTCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: PCRPRTLLGFRALSLYTQVRNWS*AAVSRV
Trigger: GACTCTGGAAACTGCCGCCAATGACCAATTTCTGAC...CTGAGTGTACAAACTCAGAGCCCGGAAGCCAAGAAGGGTCCTTGGCCTGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCCGCTGTGGAGGAGGGTaGGCTGTGTTAGACCAGTGC +
Preference number: 5 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGIRCGGG*AVLDQC
Trigger: GCACTGGTCTAACACAGCCAACCCTCCTCCACAGCG...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTACGAACTGGGCACTGCCACAGTTaGGCTCTGTGCATCCATCTG +
Preference number: 5 (lower is better)
Translates to: HLGGTATVWLCASICLRTGHCHS*ALCIHL
Trigger: CAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCC...AGTTCGTAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp TGCTGTTCTGTAGGTGGAGAGTCGGATGCGATCCAGATCTTGAGCCCTAGGCTCGATGCGATCCAGATCTaGAGCCCTAGGCTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: CCSVGGESDAIQILSPRLDAIQI*SPRLLA
Trigger: AGCAAGGAGCCTAGGGCTCAAGATCTGGATCGCATC...GAGCCTAGGGCTCAAGATCTGGATCGCATCCGACTCTCCACCTACAGAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS TCA 90 bp AGCAGACCGATGGATTCTCTTGGAATGGACGGGCGCTTCAGTCACTaGCTCGCCAAACTCTTAGAAGGTGTCCATTGGTCTGCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: SRPMDSLGMDGRFSH*LAKLLEGVHWSAGR
Trigger: CCTCCCTGCAGACCAATGGACACCTTCTAAGAGTTTGGCGAGTCAGTGACTGAAGCGCCCGTCCATTCCAAGAGAATCCATCGGTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588506.1
CDS TCA 90 bp CACAGTGAAACCCCATCTCTTGGAATGGACGGGCGCTTCAGTCACTaGCTCGCCAAACTCTTAGAAGGTGTCCATTGGTCTGCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: HSETPSLGMDGRFSH*LAKLLEGVHWSAGR
Trigger: CCTCCCTGCAGACCAATGGACACCTTCTAAGAGTTTGGCGAGTCAGTGACTGAAGCGCCCGTCCATTCCAAGAGATGGGGTTTCACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588771.1
ENST00000683092.1
CDS GCA 90 bp CCCACACCCTCTATCTTCATGACACCCAGCAGCTCTGTTGAAGGCTaGTCTCTTGGGGTGAAACTCCCAGCAGGGCTGGTAGGAAATTAC +
Preference number: 5 (lower is better)
Translates to: PTPSIFMTPSSSVEG*SLGVKLPAGLVGNY
Trigger: GTAATTTCCTACCAGCCCTGCTGGGAGTTTCACCCCAAGAGAGCAGCCTTCAACAGAGCTGCTGGGTGTCATGAAGATAGAGGGTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587723.1
CDS CCA 90 bp TATTATTTAATAATGTTGGAAGTGCCGGGTCCGCTGCCAGAGTTGTaGGTCATGTGGGCACAGCAGAGGCTGGCTGCTGCCAGTACCAGG +
Preference number: 5 (lower is better)
Translates to: YYLIMLEVPGPLPEL*VMWAQQRLAAASTR
Trigger: CCTGGTACTGGCAGCAGCCAGCCTCTGCTGTGCCCACATGACCCACAACTCTGGCAGCGGACCCGGCACTTCCAACATTATTAAATAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283365.14
ENST00000315456.10
ENST00000596745.5
ENST00000682923.1
CDS CCA 90 bp ATTGGGTCACCTAGACAGCTGAGATGTCACCTTGCAGCAGACCGATaGATTCTCTTGGAATGGACGGGCGCTTCAGTCACTGACTCGCCA +
Preference number: 5 (lower is better)
Translates to: IGSPRQLRCHLAADR*ILLEWTGASVTDSP
Trigger: TGGCGAGTCAGTGACTGAAGCGCCCGTCCATTCCAAGAGAATCCATCGGTCTGCTGCAAGGTGACATCTCAGCTGTCTAGGTGACCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588506.1
CDS-3UTR CAA 90 bp GCTTCTCAGGCTGATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: ASQADLGTWGAKVHGWKHAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...GTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CAA 90 bp AGCCAAGTTGAGTGGCTTCTCAGGCTGATCTGGGAACATGGGGTGCAAAGGTTCACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: SQVEWLLRLIWEHGVQRFTLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...GAACCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGCCACTCAACTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCTGATAAGCTTCATCTaGCAGCTTCTGTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSLISFI*QLLFQV
Trigger: TACCTGAAACAGAAGCTGCAAGATGAAGCTTATCAG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCATATTGCATTCAACCTaGCAAGCTGACCTGATAAGC +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSILHST*QADLIS
Trigger: GCTTATCAGGTCAGCTTGCAAGGTTGAATGCAATAT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGGCGCCACCTTGGGGGCACTGCCACAGTTTGGCTCTGTGCATCCATCTGTTTAGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: WRHLGGTATVWLCASICLDAIQI*SPHLCK
Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...TAAACAGATGGATGCACAGAGCCAAACTGTGGCAGTGCCCCCAAGGTGGCGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGTCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: PSSINMALWRRVGCVRPVSKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGCTGCTCCACATGGATTaGGTGAGTGGTTGGCATCCG +
Preference number: 5 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRLLHMD*VSGWHP
Trigger: CGGATGCCAACCACTCACCAAATCCATGTGGAGCAG...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000681274.1
CDS-3UTR CAA 90 bp TGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTGCTTAATGCATCTGCTCCACATGGATTaGGTGAGTGGTTGGCATCCG +
Preference number: 5 (lower is better)
Translates to: WGAKVHGWKHSSGTCLMHLLHMD*VSGWHP
Trigger: CGGATGCCAACCACTCACCAAATCCATGTGGAGCAG...ATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCAACTTCCCGAAGGAATaGGTCATATCGTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSNFPKE*VISSIN
Trigger: GTTTATGGACGATATGACCAATTCCTTCGGGAAGTT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR CAA 90 bp TACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGGAGCTAAGAGAGACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: YRTGVLESGLSADVELRETAVGS*RTSRRN
Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGT...CTCTCTTAGCTCCACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR CAA 90 bp CAGAGTGGGAGAACAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGAACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: QSGRTGCRSCWLQVWEARTAVGS*RTSRRN
Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGT...TCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTGTTCTCCCACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCAGACATTTTCCACATTaGCTAGTCGATGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSRHFPH*LVDAEE
Trigger: CTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR CAA 90 bp TACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGGAGCTAAGAGAGGTCAGAAATTGGTCATaGGCGGCAGTTTCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: YRTGVLESGLSADVELREVRNWS*AAVSRV
Trigger: GACTCTGGAAACTGCCGCCAATGACCAATTTCTGAC...CTCTCTTAGCTCCACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTGCTTAATGCATTAGTCCGCTGTGGAGGAGGGTaGGCTGTGTTAGACCAGTGC +
Preference number: 5 (lower is better)
Translates to: CKGSRLEAQLRDLLNALVRCGGG*AVLDQC
Trigger: GCACTGGTCTAACACAGCCAACCCTCCTCCACAGCG...GACTAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTCCCCCTGCTGGCTCTaGAGCCTGACCACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFSPCWL*SLTTGS
Trigger: TGAACCTGTGGTCAGGCTCAAGAGCCAGCAGGGGGA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp GTGGAGAGCACAGCCTCTAAGCGGGACACGTTGAGTTCAGTGTTTGGGTCCAGGCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCGTG +
Preference number: 5 (lower is better)
Translates to: VESTASKRDTLSSVFGSRLHQAG*NSQACV
Trigger: CACGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...CCTGGACCCAAACACTGAACTCAACGTGTCCCGCTTAGAGGCTGTGCTCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CAA 90 bp GTGGAGAGCACAGCCTCTAAGCGGGACACGTTGAGTTCAGTGTTTGGGTCCAGGATGGGGTCTAGGAAATaGGAAGGCCTGGCTGAAACT +
Preference number: 5 (lower is better)
Translates to: VESTASKRDTLSSVFGSRMGSRK*EGLAET
Trigger: AGTTTCAGCCAGGCCTTCCAATTTCCTAGACCCCAT...CCTGGACCCAAACACTGAACTCAACGTGTCCCGCTTAGAGGCTGTGCTCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS TCA 90 bp TCCACCAAAAGCACCGTCCGAGCTCCTGGTAATAAAAGGACTTCCTaGGGAGGGAACAGAGTGGGAGAACAGGGTGTCGTTCATGCTGGT +
Preference number: 5 (lower is better)
Translates to: STKSTVRAPGNKRTS*GGNRVGEQGVVHAG
Trigger: ACCAGCATGAACGACACCCTGTTCTCCCACTCTGTTCCCTCCTCAGGAAGTCCTTTTATTACCAGGAGCTCGGACGGTGCTTTTGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
ENST00000684610.1
ENST00000684734.1
CDS TCA 90 bp CCCCCTGAGTTCCCTGCTTCAGTTCTTCTTCCTTTAGTAGCTTCATaGGACCCTCCAACTGGACCATTAGCTCTCTCCGGCTCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: PPEFPASVLLPLVAS*DPPTGPLALSGSPG
Trigger: TCCAGGAGAGCCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGGAAGAAGAACTGAAGCAGGGAACTCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS CCA 90 bp AGTATCAACGATGTGAGCCAAGTTGAGTGGCTTCTCAGGCTGATCTaGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAG +
Preference number: 5 (lower is better)
Translates to: SINDVSQVEWLLRLI*EHGVQRFTAGSTAQ
Trigger: CTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCACATCGTTGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315456.10
ENST00000399113.7
ENST00000598142.5
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000680366.1
ENST00000682581.1
ENST00000682923.1
ENST00000683379.1
ENST00000684359.1
CDS CCA 90 bp TACAGGTCTGGGAGGCCAAGTATCAACGATGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGGGAACATGGGGTGCAAAGGTTCACG +
Preference number: 5 (lower is better)
Translates to: YRSGRPSINDVSQVE*LLRLIWEHGVQRFT
Trigger: CGTGAACCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCACATCGTTGATACTTGGCCTCCCAGACCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315456.10
ENST00000399113.7
ENST00000598142.5
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000680366.1
ENST00000682581.1
ENST00000682923.1
ENST00000683379.1
ENST00000684359.1
CDS-3UTR CAA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAATCTACTTCACTGTCCTaGGGAGGAGAGCGTGCACCG +
Preference number: 5 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKSTSLS*GGERAP
Trigger: CGGTGCACGCTCTCCTCCCAAGGACAGTGAAGTAGA...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679678.1
CDS-3UTR CAA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGATCTACTTCACTGTCCTaGGGAGGAGAGCGTGCACCG +
Preference number: 5 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGSTSLS*GGERAP
Trigger: CGGTGCACGCTCTCCTCCCAAGGACAGTGAAGTAGA...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679796.1
CDS-3UTR CAA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAGCATGCATGAGGGGTaGTTCCGGAGCATGTTGACA +
Preference number: 5 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRSMHEG*FRSMLT
Trigger: TGTCAACATGCTCCGGAACAACCCCTCATGCATGCT...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000679678.1
CDS-3UTR CAA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAATGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKCSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFCSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGATGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGCSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTTGTGCAAATGCCTCTaGTACATCTCCCCCTACTCC +
Preference number: 5 (lower is better)
Translates to: SPPPLIWRCGGGLAVLDQLCKCL*YISPYS
Trigger: GGAGTAGGGGGAGATGTACAAGAGGCATTTGCACAA...CTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AGAGTGGGAGAACAGGGTGTCGTTCATGCTGGTTACAGGTCTGGGAGGCACGATGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: RVGEQGVVHAGYRSGRHDDAIQI*SPHLCK
Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...ATCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCCTGTTCTCCCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681065.1
CDS-3UTR CAA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYSKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000681274.1
CDS-3UTR CAA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCCTGCTCCACATGGATTaGGTGAGTGGTTGGCATCCG +
Preference number: 5 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSLLHMD*VSGWHP
Trigger: CGGATGCCAACCACTCACCAAATCCATGTGGAGCAG...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCCTGCTCCACATGGATTaGGTGAGTGGTTGGCATCCG +
Preference number: 5 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGILLHMD*VSGWHP
Trigger: CGGATGCCAACCACTCACCAAATCCATGTGGAGCAG...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp AGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAACAGTGGAGTTCTCACTaGTGGCTCCTTGCGTGGAAT +
Preference number: 5 (lower is better)
Translates to: RTVEFSLVAPCVESNQGEQWSSH*WLLAWN
Trigger: ATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTG...TTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS TCA 90 bp TTCACTGTCCTTGGGAGGAGAGCTCCTGGTAATAAAAGGACTTCCTaGGGAGGGAACAGAGTGGGAGAACAGGGTGTCGTTCATGCTGGT +
Preference number: 5 (lower is better)
Translates to: FTVLGRRAPGNKRTS*GGNRVGEQGVVHAG
Trigger: ACCAGCATGAACGACACCCTGTTCTCCCACTCTGTTCCCTCCTCAGGAAGTCCTTTTATTACCAGGAGCTCTCCTCCCAAGGACAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000399113.7
ENST00000591182.5
ENST00000601632.6
ENST00000682129.1
CDS TCA 90 bp GCTTATGGTTTAGCAACACTTGGAATGGACGGGCGCTTCAGTCACTaGCTCGCCAAACTCTTAGAAGGTGTCCATTGGTCTGCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: AYGLATLGMDGRFSH*LAKLLEGVHWSAGR
Trigger: CCTCCCTGCAGACCAATGGACACCTTCTAAGAGTTTGGCGAGTCAGTGACTGAAGCGCCCGTCCATTCCAAGTGTTGCTAAACCATAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682406.1
CDS CCA 90 bp CACTATCTTCAATCATTCTCATACAGAATAGCTCTGGCTGGCATCTaGCAGGTGCCCTTCTGGGACGAAGCTTCCAGAGGAAGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: HYLQSFSYRIALAGI*QVPFWDEASRGRSR
Trigger: CCTGCTCCTTCCTCTGGAAGCTTCGTCCCAGAAGGGCACCTGCCAGATGCCAGCCAGAGCTATTCTGTATGAGAATGATTGAAGATAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682483.1
CDS-3UTR CAA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR CAA 90 bp ACGCCATTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCATG +
Preference number: 5 (lower is better)
Translates to: TPFCLAYRTGVLESGLSALHQAG*NSQACM
Trigger: CATGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...AGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAATGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679796.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFTLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTAACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: PCVESNQGECSNQRLLDLTLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCAAGATTTCTCTGTTCTaGTTTTCTAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSKISLF*FSSSAI
Trigger: GATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCTCCTTAAGTTTCTTCTaGAACTTTGTGCAAATGCCT +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSSLSFF*NFVQMP
Trigger: AGGCATTTGCACAAAGTTCAAGAAGAAACTTAAGGA...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYDAIQI*SPHLCK
Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
CDS-3UTR CAA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVADAIQI*SPHLCK
Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGIVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp ATCCTGCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGTCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: ILLPGKWPGKYPQGKWLKSKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...CTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp ACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: TISSTTPSDQPNLPQLPSSKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...GGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTCTGCTCCACATGGATTaGGTGAGTGGTTGGCATCCG +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFLLHMD*VSGWHP
Trigger: CGGATGCCAACCACTCACCAAATCCATGTGGAGCAG...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp AATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTGCTCCACATGGATTaGGTGAGTGGTTGGCATCCG +
Preference number: 5 (lower is better)
Translates to: NMALWRRVGCVRPVLINRLLHMD*VSGWHP
Trigger: CGGATGCCAACCACTCACCAAATCCATGTGGAGCAG...CCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCTCC +
Preference number: 5 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYLHQAG*NSQACS
Trigger: GGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000597674.5
ENST00000598774.6
ENST00000679936.1
ENST00000681274.1
CDS-3UTR CAA 90 bp GCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCAGGATTTAAGTTCTGAGTTATTCCTGGTGTGTTaGGTTCAAGTCACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: ASSVQSVVECHVQDLSSELFLVC*VQVTAH
Trigger: GTGAGCAGTGACTTGAACCAAACACACCAGGAATAA...CTCAGAACTTAAATCCTGCACGTGGCACTCCACCACTGACTGGACCGAGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCCTACCAACTACGAACTaGGTGTGTGGGTTCAGAGAA +
Preference number: 5 (lower is better)
Translates to: DFTFLPSSINMALWRRVGLPTTN*VCGFRE
Trigger: TTCTCTGAACCCACACACCAAGTTCGTAGTTGGTAG...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTACCAACTACGAACTaGGTGTGTGGGTTCAGAGAA +
Preference number: 5 (lower is better)
Translates to: PSSINMALWRRVGCVRPVLPTTN*VCGFRE
Trigger: TTCTCTGAACCCACACACCAAGTTCGTAGTTGGTAG...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGTGTGCTCAGAGACATTaGTCAGGTGAGTTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: FCLAYRTGVLESGLSADVCAQRH*SGEFSG
Trigger: TCCAGAGAACTCACCTGACAAATGTCTCTGAGCACA...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGTGCAGTTGTGCCACTTaGGTGTCAGCCTGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: NMALWRRVGCVRPVLINRCSCAT*VSACAQ
Trigger: CTGAGCACAGGCTGACACCAAAGTGGCACAACTGCA...CCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AGTTGTGCCACTTTGGTGTCAGCCTGTGCTCAGAGACATTTGTCAGGTGAGTTCTGCAGTTGTGCCACTTaGGTGTCAGCCTGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: SCATLVSACAQRHLSGEFCSCAT*VSACAQ
Trigger: CTGAGCACAGGCTGACACCAAAGTGGCACAACTGCA...GAACTCACCTGACAAATGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ATGAGGCACCAGTGGCCACCTGCTCCATCTAGAGAGGTATGGGTTCACAGAGGACTGGTTAGTCAGAAATaGGTCATTGGCGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: MRHQWPPAPSREVWVHRGLVSQK*VIGGSF
Trigger: GAAACTGCCGCCAATGACCAATTTCTGACTAACCAG...TCCTCTGTGAACCCATACCTCTCTAGATGGAGCAGGTGGCCACTGGTGCCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGATAACACACGCCATTTaGTCTCGCTTACAGGACAGG +
Preference number: 5 (lower is better)
Translates to: PSSINMALWRRVGCVRPVITHAI*SRLQDR
Trigger: CCTGTCCTGTAAGCGAGACAAAATGGCGTGTGTTAT...CACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGCTCACTTGTGGCTCCTaGCGTGGAATCGAACCAAGG +
Preference number: 5 (lower is better)
Translates to: WRRVGCVRPVLINRLSALLTCGS*RGIEPR
Trigger: CCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAG...CAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACTCACTTGTGGCTCCTaGCGTGGAATCGAACCAAGG +
Preference number: 5 (lower is better)
Translates to: PCVESNQGECSNQRLLDLLTCGS*RGIEPR
Trigger: CCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAG...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCCAGTGGAGTTCTCACTaGTGGCTCCTTGCGTGGAAT +
Preference number: 5 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSQWSSH*WLLAWN
Trigger: ATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTG...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCCAGTGGAGTTCTCACTaGTGGCTCCTTGCGTGGAAT +
Preference number: 5 (lower is better)
Translates to: TISSTTPSDQPNLPQLPSQWSSH*WLLAWN
Trigger: ATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTG...GGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCCAGTGGAGTTCTCACTaGTGGCTCCTTGCGTGGAAT +
Preference number: 5 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGIQWSSH*WLLAWN
Trigger: ATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTG...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTGATGCGATCCAGATCTaGAGCCCTAGGCTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: PLTNQTYPNFRPDQPQLFDAIQI*SPRLLA
Trigger: AGCAAGGAGCCTAGGGCTCAAGATCTGGATCGCATC...AAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTTCCTCTCTTCGGTGAGGCTGCTGCCAGGCTGCTGTCTTCCTCCCAGATGATAGTTGATTaGGGCTCAGAGAAACATTTA +
Preference number: 5 (lower is better)
Translates to: GVVVPLFGEAAARLLSSSQMIVD*GSEKHL
Trigger: TAAATGTTTCTCTGAGCCCAAATCAACTATCATCTG...GGAGGAAGACAGCAGCCTGGCAGCAGCCTCACCGAAGAGAGGAACCACCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601125.5
CDS TCA 90 bp GAGGAGAGCGTGCACCGTGATCAAGCTGATTTACGTACAGCTTTATaGGGGAATGCTCTTCAGCCACAGGGCTGGATGCACTTATTCCCT +
Preference number: 5 (lower is better)
Translates to: EESVHRDQADLRTAL*GNALQPQGWMHLFP
Trigger: AGGGAATAAGTGCATCCAGCCCTGTGGCTGAAGAGCATTCCCTCATAAAGCTGTACGTAAATCAGCTTGATCACGGTGCACGCTCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269192.11
ENST00000444659.6
ENST00000679678.1
ENST00000679796.1
CDS TCA 90 bp CCACTATCTTCAATCATTCTTGGAATGGACGGGCGCTTCAGTCACTaGCTCGCCAAACTCTTAGAAGGTGTCCATTGGTCTGCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: PLSSIILGMDGRFSH*LAKLLEGVHWSAGR
Trigger: CCTCCCTGCAGACCAATGGACACCTTCTAAGAGTTTGGCGAGTCAGTGACTGAAGCGCCCGTCCATTCCAAGAATGATTGAAGATAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283365.14
CDS TCA 90 bp CTAGCTCAGCAATCAGCTGCCTTTGCTGCTTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCACTTCTCTGCTGAGGTGGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: LAQQSAAFAAYSHRW*KRCQEHFSAEVAAV
Trigger: AACAGCAGCCACCTCAGCAGAGAAGTGCTCCTGACATCTCTTTCACCATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596745.5
CDS TCA 90 bp CTAGCTCAGCAATCAGCTGCCTTTGCTGCTTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCACTTCTCTGCTGAGGTGGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: LAQQSAAFAAYSHRW*KRCQEHFSAEVAAV
Trigger: TACAGCAGCCACCTCAGCAGAGAAGTGCTCCTGACATCTCTTTCACCATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681759.1
CDS TCA 90 bp CTAGCTCAGCAATCAGCTGCCTTTGCTGCTTATTCGCATCGATGGTaGAAGAGATGTCAGGAGCACTTCTCTGCTGAGGTGGAGACGAAG +
Preference number: 5 (lower is better)
Translates to: LAQQSAAFAAYSHRW*KRCQEHFSAEVETK
Trigger: CTTCGTCTCCACCTCAGCAGAGAAGTGCTCCTGACATCTCTTTCACCATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680767.2
ENST00000681470.1
CDS-3UTR CAA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACGGATGGAAGGTAAGTTaGCCCTTTAATTCTGCCACC +
Preference number: 5 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYGWKVS*PFNSAT
Trigger: GGTGGCAGAATTAAAGGGCAAACTTACCTTCCATCC...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597674.5
ENST00000679678.1
CDS-3UTR CAA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGCCCTAGCCAGCAGTTaGTTCTGCTCTACTTCACTG +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFALASS*FCSTSL
Trigger: CAGTGAAGTAGAGCAGAACAAACTGCTGGCTAGGGC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000679678.1
CDS-3UTR CAA 90 bp GCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGCAAGGCTGTACTGTATCCCTTaGCCCTTCAGAAAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: AAWEMAWKVSPREMAKARLYCIP*PFRKAG
Trigger: TCCAGCTTTTCTGAAGGGCAAAGGGATACAGTACAG...CCTTGCTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTCTGTACTGTATCCCTTaGCCCTTCAGAAAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVALYCIP*PFRKAG
Trigger: TCCAGCTTTTCTGAAGGGCAAAGGGATACAGTACAG...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679796.1
CDS-3UTR CAA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGTTGTTCCGGAGCATGTaGACATACAACCCGATGAGA +
Preference number: 5 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRLFRSM*TYNPMR
Trigger: TCTCATCGGGTTGTATGTCAACATGCTCCGGAACAA...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000679678.1
CDS-3UTR CAA 90 bp AGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: RVGCVRPVLINRLSALMETLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...CTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTTLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGGCCCTCTAAAGAGGGTCCTTGGAAAAGACTATCCCAGTCTTTTATCCTCTTGACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: GPSKEGPWKRLSQSFILLTLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...CAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACAGCAATCAGCTGCCTTaGCTGCTTATTCGCATCGAT +
Preference number: 5 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYSNQLP*LLIRID
Trigger: ATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCT...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR CAA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCTGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFCSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTTGTGCAAATGCCTCTaGTACATCTCCCCCTACTCC +
Preference number: 5 (lower is better)
Translates to: TISSTTPSDQPNLPQLPSLCKCL*YISPYS
Trigger: GGAGTAGGGGGAGATGTACAAGAGGCATTTGCACAA...GGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCATTGTGCAAATGCCTCTaGTACATCTCCCCCTACTCC +
Preference number: 5 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSLCKCL*YISPYS
Trigger: GGAGTAGGGGGAGATGTACAAGAGGCATTTGCACAA...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACAAAGAAACAACATATGCCAGCTCGGTCCAGTCAGTGGTGGAGTGCCACGTGCAAGCCTTTTCAGAGGTaGGTGAGGGAACAAGATCCT +
Preference number: 5 (lower is better)
Translates to: TKKQHMPARSSQWWSATCKPFQR*VREQDP
Trigger: AGGATCTTGTTCCCTCACCAACCTCTGAAAAGGCTT...GCACGTGGCACTCCACCACTGACTGGACCGAGCTGGCATATGTTGTTTCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTAAGCCTTTTCAGAGGTaGGTGAGGGAACAAGATCCT +
Preference number: 5 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVAKPFQR*VREQDP
Trigger: AGGATCTTGTTCCCTCACCAACCTCTGAAAAGGCTT...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCCTCTAAGCGGGACACGTTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCAAAGCCTTTTCAGAGGTaGGTGAGGGAACAAGATCCT +
Preference number: 5 (lower is better)
Translates to: ASKRDTLSSVFGSRLFRAKPFQR*VREQDP
Trigger: AGGATCTTGTTCCCTCACCAACCTCTGAAAAGGCTT...TGCTCTGAACAACCTGGACCCAAACACTGAACTCAACGTGTCCCGCTTAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFSKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp AACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCCTGAATCCCTGCTCCACATGGATTaGGTGAGTGGTTGGCATCCG +
Preference number: 5 (lower is better)
Translates to: NQTYPNFRPDQPQLFPESLLHMD*VSGWHP
Trigger: CGGATGCCAACCACTCACCAAATCCATGTGGAGCAG...GGATTCAGGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp CCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTACTGCTCCACATGGATTaGGTGAGTGGTTGGCATCCG +
Preference number: 5 (lower is better)
Translates to: PLIWRCGGGLAVLDQCLLLLHMD*VSGWHP
Trigger: CGGATGCCAACCACTCACCAAATCCATGTGGAGCAG...TAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GCTTCTCAGGCTGATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAACTTCCCGAAGGAATaGGTCATATCGTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: ASQADLGTWGAKVHGWKHNFPKE*VISSIN
Trigger: GTTTATGGACGATATGACCAATTCCTTCGGGAAGTT...GTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CAA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGTAATTGTGACACTGTaGGCATCGGTAGCGAAATCC +
Preference number: 5 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVAVIVTL*ASVAKS
Trigger: GGATTTCGCTACCGATGCCAACAGTGTCACAATTAC...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCTCC +
Preference number: 5 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVLHQAG*NSQACS
Trigger: GGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTACTTCATCAAGCCGGTTaGAACTCTCAAGCATGCTCC +
Preference number: 5 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLLHQAG*NSQACS
Trigger: GGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCATAACTTTAGTCCGTTaGGGGATCTTATGGCACCTG +
Preference number: 5 (lower is better)
Translates to: DFTFLPSSINMALWRRVGITLVR*GILWHL
Trigger: CAGGTGCCATAAGATCCCCAAACGGACTAAAGTTAT...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAACTGAGAACTGTGCAGTaGTGCCACTTTGGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: LLRTVEFSLVAPCVESNQLRTVQ*CHFGVS
Trigger: GCTGACACCAAAGTGGCACAACTGCACAGTTCTCAG...TTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGCGCTGTGGAGGAGGGTaGGCTGTGTTAGACCAGTGC +
Preference number: 5 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKRCGGG*AVLDQC
Trigger: GCACTGGTCTAACACAGCCAACCCTCCTCCACAGCG...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCATTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCACGCTGTGGAGGAGGGTaGGCTGTGTTAGACCAGTGC +
Preference number: 5 (lower is better)
Translates to: SFKNPFFTISSTTPSDQPRCGGG*AVLDQC
Trigger: GCACTGGTCTAACACAGCCAACCCTCCTCCACAGCG...TGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GTGGAGAGCACAGCCTCTAAGCGGGACACGTTGAGTTCAGTGTTTGGGTCCAGGTGCAGCAACCAAAGGTaGCTGGATTTACAAGATCTA +
Preference number: 5 (lower is better)
Translates to: VESTASKRDTLSSVFGSRCSNQR*LDLQDL
Trigger: TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCA...CCTGGACCCAAACACTGAACTCAACGTGTCCCGCTTAGAGGCTGTGCTCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CAA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAACAGTGGAGTTCTCACTaGTGGCTCCTTGCGTGGAAT +
Preference number: 5 (lower is better)
Translates to: MPFLLRTVEFSLVAPCVEQWSSH*WLLAWN
Trigger: ATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTG...TTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCAGTGGAGTTCTCACTaGTGGCTCCTTGCGTGGAAT +
Preference number: 5 (lower is better)
Translates to: PLTNQTYPNFRPDQPQLFQWSSH*WLLAWN
Trigger: ATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTG...AAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAGGCAGTGGCGCCACCTaGGGGGCACTGCCACAGTTT +
Preference number: 5 (lower is better)
Translates to: DCGISLLREGSDQQLEKLGSGAT*GALPQF
Trigger: AAACTGTGGCAGTGCCCCCAAGGTGGCGCCACTGCC...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCGTG +
Preference number: 5 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPLHQAG*NSQACV
Trigger: CACGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000680822.1
CDS-3UTR CAA 90 bp TTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACCTGGAGCTTCCCCGCTaGCCAGCATGTCAGCATGGT +
Preference number: 5 (lower is better)
Translates to: FKNPFFTISSTTPSDQPNLELPR*PACQHG
Trigger: ACCATGCTGACATGCTGGCAAGCGGGGAAGCTCCAG...GTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681241.1
CDS-3UTR CAA 90 bp AGCTTCTGTTTCAGGTATTCCTCCATCTGGAGCTCATTCTCCAGCTGCCGGACAATGGGGTCTAGGAAATaGGAAGGCCTGGCTGAAACT +
Preference number: 5 (lower is better)
Translates to: SFCFRYSSIWSSFSSCRTMGSRK*EGLAET
Trigger: AGTTTCAGCCAGGCCTTCCAATTTCCTAGACCCCAT...TGTCCGGCAGCTGGAGAATGAGCTCCAGATGGAGGAATACCTGAAACAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CAA 90 bp ATCTGGGAACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTTTGCCATTTTCCACATTaGCTAGTCGATGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: IWEHGVQRFTAGSTAQGLCHFPH*LVDAEE
Trigger: CTCTTCTGCATCGACTAGCAAATGTGGAAAATGGCA...AAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681065.1
CDS CCA 90 bp TGCTTCAGTTCTTCTTCCTTTAGTAGCTTCATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGGCTCTCCTGGAGAGCAGACATTCTC +
Preference number: 5 (lower is better)
Translates to: CFSSSSFSSFMRPSN*TISSLRLSWRADIL
Trigger: GAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGGAAGAAGAACTGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000348997.9
ENST00000399121.9
ENST00000596745.5
ENST00000597599.5
ENST00000597674.5
ENST00000598774.6
ENST00000599844.5
ENST00000601632.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
ENST00000682483.1
ENST00000682581.1
ENST00000682923.1
ENST00000683370.1
ENST00000683876.1
ENST00000684228.1
CDS CCA 90 bp CTTTTCCCACTATCTTCAATCATTCTCATACAGAATAGCTCTGGCTaGCATCTGGCAGGTGCCCTTCTGGGACGAAGCTTCCAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LFPLSSIILIQNSSG*HLAGALLGRSFQRK
Trigger: CTTCCTCTGGAAGCTTCGTCCCAGAAGGGCACCTGCCAGATGCCAGCCAGAGCTATTCTGTATGAGAATGATTGAAGATAGTGGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682483.1
CDS-3UTR CAA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAAGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: MPFLLRTVEFSLVAPCVEAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...TTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp CTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: LLRTVEFSLVAPCVESNQAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...TTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCAGCATGCATGAGGGGTaGTTCCGGAGCATGTTGACA +
Preference number: 5 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTSMHEG*FRSMLT
Trigger: TGTCAACATGCTCCGGAACAACCCCTCATGCATGCT...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679796.1
CDS-3UTR CAA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCAGCAATCAGCTGCCTTaGCTGCTTATTCGCATCGAT +
Preference number: 5 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGISNQLP*LLIRID
Trigger: ATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCT...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCAGCAATCAGCTGCCTTaGCTGCTTATTCGCATCGAT +
Preference number: 5 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSSNQLP*LLIRID
Trigger: ATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCT...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTAAGCCTTTTCAGAGGTaGGTGAGGGAACAAGATCCT +
Preference number: 5 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVKPFQR*VREQDP
Trigger: AGGATCTTGTTCCCTCACCAACCTCTGAAAAGGCTT...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCATATTGCATTCAACCTaGCAAGCTGACCTGATAAGC +
Preference number: 5 (lower is better)
Translates to: DFTFLPSSINMALWRRVGILHST*QADLIS
Trigger: GCTTATCAGGTCAGCTTGCAAGGTTGAATGCAATAT...GCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGDAIQI*SPHLCK
Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAAGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: MPFLLRTVEFSLVAPCVEDAIQI*SPHLCK
Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...TTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFDAIQI*SPHLCK
Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
CDS-3UTR CAA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTAGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: PCVESNQGECSNQRLLDLDAIQI*SPHLCK
Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: ESHAVDFTFLPSSINMALDAIQI*SPHLCK
Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp CCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: PLIWRCGGGLAVLDQCLLVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...TAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGATCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: EQHPQNRNRRPISVVTERSKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...TCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp CTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAATCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: LSSKDSGVLTCGSLRGIESKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...TTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp TGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATCTGCTCCACATGGATTaGGTGAGTGGTTGGCATCCG +
Preference number: 5 (lower is better)
Translates to: WVNGYHAPWRNQNSSKYYLLHMD*VSGWHP
Trigger: CGGATGCCAACCACTCACCAAATCCATGTGGAGCAG...ATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTGCTCCACATGGATTaGGTGAGTGGTTGGCATCCG +
Preference number: 5 (lower is better)
Translates to: VESNQGECSNQRLLDLQDLLHMD*VSGWHP
Trigger: CGGATGCCAACCACTCACCAAATCCATGTGGAGCAG...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp TCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGAACTTCCCGAAGGAATaGGTCATATCGTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: SPPPLIWRCGGGLAVLDQNFPKE*VISSIN
Trigger: GTTTATGGACGATATGACCAATTCCTTCGGGAAGTT...CTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFTAVGS*RTSRRN
Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTAACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: PCVESNQGECSNQRLLDLTAVGS*RTSRRN
Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGT...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp ATCCTGCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGGTAATTGTGACACTGTaGGCATCGGTAGCGAAATCC +
Preference number: 5 (lower is better)
Translates to: ILLPGKWPGKYPQGKWLKVIVTL*ASVAKS
Trigger: GGATTTCGCTACCGATGCCAACAGTGTCACAATTAC...CTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTGTAATTGTGACACTGTaGGCATCGGTAGCGAAATCC +
Preference number: 5 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPVIVTL*ASVAKS
Trigger: GGATTTCGCTACCGATGCCAACAGTGTCACAATTAC...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCTCC +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFLHQAG*NSQACS
Trigger: GGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000597674.5
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp CTTGCTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCTCC +
Preference number: 5 (lower is better)
Translates to: LAGFALRTGPKSKSGEPRLHQAG*NSQACS
Trigger: GGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...CCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AGTTGTGCCACTTTGGTGTCAGCCTGTGCTCAGAGACATTTGTCAGGTGAGTTCAGGCCTCCAAACAACTaGATGGGGGAACTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: SCATLVSACAQRHLSGEFRPPNN*MGELVN
Trigger: GTTCACAAGTTCCCCCATCAAGTTGTTTGGAGGCCT...GAACTCACCTGACAAATGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCAAGGAGAGCAAACGTTaGCAAGCGCACTTTAAGCCT +
Preference number: 5 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGIKESKR*QAHFKP
Trigger: AGGCTTAAAGTGCGCTTGCAAACGTTTGCTCTCCTT...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCTGTGCTCAGAGACATTaGTCAGGTGAGTTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: ALSSKDSGVLTCGSLRGICAQRH*SGEFSG
Trigger: TCCAGAGAACTCACCTGACAAATGTCTCTGAGCACA...GATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTTGTGCTCAGAGACATTaGTCAGGTGAGTTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPCAQRH*SGEFSG
Trigger: TCCAGAGAACTCACCTGACAAATGTCTCTGAGCACA...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTCTGGTTAGTCAGAAATaGGTCATTGGCGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVLVSQK*VIGGSF
Trigger: GAAACTGCCGCCAATGACCAATTTCTGACTAACCAG...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAATAACACACGCCATTTaGTCTCGCTTACAGGACAGG +
Preference number: 5 (lower is better)
Translates to: ALWRRVGCVRPVLINRLSITHAI*SRLQDR
Trigger: CCTGTCCTGTAAGCGAGACAAAATGGCGTGTGTTAT...TGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACCGCTGTGGAGGAGGGTaGGCTGTGTTAGACCAGTGC +
Preference number: 5 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNRCGGG*AVLDQC
Trigger: GCACTGGTCTAACACAGCCAACCCTCCTCCACAGCG...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGATCCAGCACAATTTGTaGTGTGGGGGTGTTCTAAGT +
Preference number: 5 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRIQHNL*CGGVLS
Trigger: ACTTAGAACACCCCCACACAACAAATTGTGCTGGAT...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS TCA 90 bp TTGGTAAATCCTATTTATCTTGGAATGGACGGGCGCTTCAGTCACTaGCTCGCCAAACTCTTAGAAGGTGTCCATTGGTCTGCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: LVNPIYLGMDGRFSH*LAKLLEGVHWSAGR
Trigger: CCTCCCTGCAGACCAATGGACACCTTCTAAGAGTTTGGCGAGTCAGTGACTGAAGCGCCCGTCCATTCCAAGATAAATAGGATTTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315456.10
ENST00000596745.5
ENST00000598774.6
ENST00000679936.1
ENST00000682483.1
ENST00000682923.1
ENST00000683379.1
ENST00000684266.1
ENST00000684359.1
CDS TCA 90 bp TGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCTTCTATaGCATTCCATATGTCCACCAGGTGCACTGTGCTCAAGGAGCACT +
Preference number: 5 (lower is better)
Translates to: CLGPGCSEHFPAMLL*HSICPPGALCSRST
Trigger: AGTGCTCCTTGAGCACAGTGCACCTGGTGGACATATGGAATGTCATAGAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682581.1
CDS TCA 90 bp ACAGAGGTGATTCAGGGAACATCAGGAGTTGTACTTTGTCTAAGATaGTTCTGGTCTGATATCGCCCCCAGGTGCCTGGCAGAAGCAAAC +
Preference number: 5 (lower is better)
Translates to: TEVIQGTSGVVLCLR*FWSDIAPRCLAEAN
Trigger: GTTTGCTTCTGCCAGGCACCTGGGGGCGATATCAGACCAGAATCATCTTAGACAAAGTACAACTCCTGATGTTCCCTGAATCACCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000683705.1
ENST00000684610.1
CDS GCA 90 bp GAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATaGTTCTATGACATTCCATATGTCCACCAGGTGCACTTCAGCGCA +
Preference number: 5 (lower is better)
Translates to: EFSVWVQVVQSIFPQ*FYDIPYVHQVHFSA
Trigger: TGCGCTGAAGTGCACCTGGTGGACATATGGAATGTCATAGAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACTGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585446.1
CDS GCA 90 bp GCCGAGATCATGCCACTGAACTGCATCCTTCTCACGTGTCATTCCTaGACAAATATGTGGCTTTTCAGGCATCTTGTTCTGACCTCCATG +
Preference number: 5 (lower is better)
Translates to: AEIMPLNCILLTCHS*TNMWLFRHLVLTSM
Trigger: CATGGAGGTCAGAACAAGATGCCTGAAAAGCCACATATTTGTGCAGGAATGACACGTGAGAAGGATGCAGTTCAGTGGCATGATCTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684734.1
CDS CCA 90 bp ACTGCACAAAGGTCACAATTCCAGGTGAAGACACAGTACCACACATaGGGTCTAGGAAATTGGAAGGCCTGGCTGAAACTCTCCCAAACA +
Preference number: 5 (lower is better)
Translates to: TAQRSQFQVKTQYHT*GLGNWKAWLKLSQT
Trigger: TGTTTGGGAGAGTTTCAGCCAGGCCTTCCAATTTCCTAGACCCCATGTGTGGTACTGTGTCTTCACCTGGAATTGTGACCTTTGTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588949.6
ENST00000679372.1
ENST00000682406.1
CDS CCA 90 bp GGACTTTTACGTTGCAGTGCATCACGTTCTAATTCTTTGGAGGAGTaGGAAGCAGCAAAGCTCTTAGAGCCAGGCTATTCACACCCACAC +
Preference number: 5 (lower is better)
Translates to: GLLRCSASRSNSLEE*EAAKLLEPGYSHPH
Trigger: GTGTGGGTGTGAATAGCCTGGCTCTAAGAGCTTTGCTGCTTCCCACTCCTCCAAAGAATTAGAACGTGATGCACTGCAACGTAAAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587723.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGGATGGAAGGTAAGTTaGCCCTTTAATTCTGCCACC +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFGWKVS*PFNSAT
Trigger: GGTGGCAGAATTAAAGGGCAAACTTACCTTCCATCC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597674.5
ENST00000679678.1
CDS-3UTR CAA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTAACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLTLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: IEPRGMQQPKVAGFTRSITLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...GATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGTGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKCSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNCSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCTTGTGCAAATGCCTCTaGTACATCTCCCCCTACTCC +
Preference number: 5 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTLCKCL*YISPYS
Trigger: GGAGTAGGGGGAGATGTACAAGAGGCATTTGCACAA...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTAAAGCCTTTTCAGAGGTaGGTGAGGGAACAAGATCCT +
Preference number: 5 (lower is better)
Translates to: PCVESNQGECSNQRLLDLKPFQR*VREQDP
Trigger: AGGATCTTGTTCCCTCACCAACCTCTGAAAAGGCTT...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGAAGCCTTTTCAGAGGTaGGTGAGGGAACAAGATCCT +
Preference number: 5 (lower is better)
Translates to: PESHAVDFTFLPSSINMAKPFQR*VREQDP
Trigger: AGGATCTTGTTCCCTCACCAACCTCTGAAAAGGCTT...CGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTAAGCCTTTTCAGAGGTaGGTGAGGGAACAAGATCCT +
Preference number: 5 (lower is better)
Translates to: PLTNQTYPNFRPDQPQLFKPFQR*VREQDP
Trigger: AGGATCTTGTTCCCTCACCAACCTCTGAAAAGGCTT...AAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGTATTATTTAATAATGTaGGAAGTGCCGGGTCCGCTG +
Preference number: 5 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRYYLIM*EVPGPL
Trigger: CAGCGGACCCGGCACTTCCAACATTATTAAATAATA...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598774.6
CDS-3UTR CAA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTDAIQI*SPHLCK
Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: VESNQGECSNQRLLDLQDVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp TTGAGTTCAGTGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCTTCTTCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: LSSVFGSRLFRAFSRNASSKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...AGAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACTGAACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588949.6
ENST00000679372.1
CDS-3UTR CAA 90 bp ATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCCTGCTCCACATGGATTaGGTGAGTGGTTGGCATCCG +
Preference number: 5 (lower is better)
Translates to: IIIFWVNGYHAPWRNQNSLLHMD*VSGWHP
Trigger: CGGATGCCAACCACTCACCAAATCCATGTGGAGCAG...GCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACAACTTCCCGAAGGAATaGGTCATATCGTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYNFPKE*VISSIN
Trigger: GTTTATGGACGATATGACCAATTCCTTCGGGAAGTT...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000681274.1
CDS-3UTR CAA 90 bp AGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: RVGCVRPVLINRLSALMETAVGS*RTSRRN
Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGT...CTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACAGACATTTTCCACATTaGCTAGTCGATGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYRHFPH*LVDAEE
Trigger: CTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCT...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000681274.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGTAATTGTGACACTGTaGGCATCGGTAGCGAAATCC +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFVIVTL*ASVAKS
Trigger: GGATTTCGCTACCGATGCCAACAGTGTCACAATTAC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATTCCGGGCTCTGAGTTaGTACACTCAGGAACCAAAT +
Preference number: 5 (lower is better)
Translates to: MPFLLRTVEFSLVAPCVEFRALS*YTQEPN
Trigger: ATTTGGTTCCTGAGTGTACAAACTCAGAGCCCGGAA...TTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AGTTGTGCCACTTTGGTGTCAGCCTGTGCTCAGAGACATTTGTCAGGTGAGTTCTTCCGGGCTCTGAGTTaGTACACTCAGGAACCAAAT +
Preference number: 5 (lower is better)
Translates to: SCATLVSACAQRHLSGEFFRALS*YTQEPN
Trigger: ATTTGGTTCCTGAGTGTACAAACTCAGAGCCCGGAA...GAACTCACCTGACAAATGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGACTGCTCACAGAGACTaGGAGTCAACTACAGACCGT +
Preference number: 5 (lower is better)
Translates to: RVGCVRPVLINRLSALMETAHRD*ESTTDR
Trigger: ACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAGT...CTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GAAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAAGGCCTCCAAACAACTaGATGGGGGAACTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: EGYMQNTRWPAKAINIQKRPPNN*MGELVN
Trigger: GTTCACAAGTTCCCCCATCAAGTTGTTTGGAGGCCT...TTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCACAACTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCGAATCACCTAGAGGGTaGACTAAAACAGACTTCTGG +
Preference number: 5 (lower is better)
Translates to: PQLFPESHAVDFTFLPSSESPRG*TKTDFW
Trigger: CCAGAAGTCTGTTTTAGTCAACCCTCTAGGTGATTC...GGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAGTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCGTTCAGAGAAGGTTTTaGCCAGCCCCAGAAGCAAAA +
Preference number: 5 (lower is better)
Translates to: CGGGLAVLDQCLLTGYQLVQRRF*PAPEAK
Trigger: TTTTGCTTCTGGGGCTGGCAAAAACCTTCTCTGAAC...GAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGGCCCTCTAAAGAGGGTCCTTGGAAAAGACTATCCCAGTCTTTTATCCTCTTGCCCAAGGCAAGTGATTaGGTTTCAAAGGGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: GPSKEGPWKRLSQSFILLPKASD*VSKGSQ
Trigger: TTGGCTGCCCTTTGAAACCAAATCACTTGCCTTGGG...CAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTGAGAACTGTGCAGTaGTGCCACTTTGGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: VESNQGECSNQRLLDLQDLRTVQ*CHFGVS
Trigger: GCTGACACCAAAGTGGCACAACTGCACAGTTCTCAG...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTAATAACACACGCCATTTaGTCTCGCTTACAGGACAGG +
Preference number: 5 (lower is better)
Translates to: PCVESNQGECSNQRLLDLITHAI*SRLQDR
Trigger: CCTGTCCTGTAAGCGAGACAAAATGGCGTGTGTTAT...TAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAATAACACACGCCATTTaGTCTCGCTTACAGGACAGG +
Preference number: 5 (lower is better)
Translates to: LLRTVEFSLVAPCVESNQITHAI*SRLQDR
Trigger: CCTGTCCTGTAAGCGAGACAAAATGGCGTGTGTTAT...TTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCATAACACACGCCATTTaGTCTCGCTTACAGGACAGG +
Preference number: 5 (lower is better)
Translates to: CGGGLAVLDQCLLTGYQLITHAI*SRLQDR
Trigger: CCTGTCCTGTAAGCGAGACAAAATGGCGTGTGTTAT...GAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAAACCGCTGTGGAGGAGGGTaGGCTGTGTTAGACCAGTGC +
Preference number: 5 (lower is better)
Translates to: LSALMEMDVQFIVEQERNRCGGG*AVLDQC
Trigger: GCACTGGTCTAACACAGCCAACCCTCCTCCACAGCG...GTTTCTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAACGCTGTGGAGGAGGGTaGGCTGTGTTAGACCAGTGC +
Preference number: 5 (lower is better)
Translates to: INRLSALMEMDVQFIVEQRCGGG*AVLDQC
Trigger: GCACTGGTCTAACACAGCCAACCCTCCTCCACAGCG...TTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTACTCACTTGTGGCTCCTaGCGTGGAATCGAACCAAGG +
Preference number: 5 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLLTCGS*RGIEPR
Trigger: CCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAG...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTCTCACTTGTGGCTCCTaGCGTGGAATCGAACCAAGG +
Preference number: 5 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSLTCGS*RGIEPR
Trigger: CCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAG...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGCTCACTTGTGGCTCCTaGCGTGGAATCGAACCAAGG +
Preference number: 5 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKLTCGS*RGIEPR
Trigger: CCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAG...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAGCTAAGACTGGTTaGAAACTTATACCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRKAKTG*KLIPLG
Trigger: CCCCAGAGGTATAAGTTTCAAACCAGTCTTAGCTTT...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAATTGAGCACATTTaGGTGAGCCATGGGGAACAA +
Preference number: 5 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRKIEHI*VSHGEQ
Trigger: TTGTTCCCCATGGCTCACCAAAATGTGCTCAATTTT...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGTCCCCCTGCTGGCTCTaGAGCCTGACCACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKSPCWL*SLTTGS
Trigger: TGAACCTGTGGTCAGGCTCAAGAGCCAGCAGGGGGA...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTATCCCCCTGCTGGCTCTaGAGCCTGACCACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: DCGISLLREGSDQQLEKLSPCWL*SLTTGS
Trigger: TGAACCTGTGGTCAGGCTCAAGAGCCAGCAGGGGGA...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAGTGAGTGGGATATATaGTCATACATAGCGTGGTAC +
Preference number: 5 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRSEWDI*SYIAWY
Trigger: GTACCACGCTATGTATGACAATATATCCCACTCACT...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
CDS TCA 90 bp TGTTTGGGTCCAGGTTGTTCAGAGCATTTTCCCGCAATGCTTCTATaGCATTCCATATGTCCACCAGGTGCACTTCAGCGCATTACCAGT +
Preference number: 5 (lower is better)
Translates to: CLGPGCSEHFPAMLL*HSICPPGALQRITS
Trigger: ACTGGTAATGCGCTGAAGTGCACCTGGTGGACATATGGAATGTCATAGAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585446.1
CDS TCA 90 bp TCAGGGAACATCAGGAGTTGTACTTTGTCTAAGATGATTCTGGTCTaGTATCGCCCCCAGGTGCCTGGCAGAAGCAAACCAAAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: SGNIRSCTLSKMILV*YRPQVPGRSKPKSS
Trigger: AGAAGACTTTGGTTTGCTTCTGCCAGGCACCTGGGGGCGATATCAGACCAGAATCATCTTAGACAAAGTACAACTCCTGATGTTCCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000683705.1
ENST00000684610.1
CDS GCA 90 bp GGCTGGCATTCAATTGCATTTCTTCTGAACAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAGTCGGATGCGATCCAGATCTTGAGC +
Preference number: 5 (lower is better)
Translates to: GWHSIAFLLNKPKLA*CSVGGESDAIQILS
Trigger: GCTCAAGATCTGGATCGCATCCGACTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTTGTTCAGAAGAAATGCAATTGAATGCCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682581.1
CDS-3UTR CAA 90 bp ACAGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: TALLNSTLKTETVGQSLWAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...CCACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CAA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: LFPESHAVDFTFLPSSINAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TATTTGGACAGCATTTGTTTATTTCCTTGCAGAACCGCCTCTATAGGGCTGGGAGCCCTAGCCAGCAGTTaGTTCTGCTCTACTTCACTG +
Preference number: 5 (lower is better)
Translates to: YLDSICLFPCRTASIGLGALASS*FCSTSL
Trigger: CAGTGAAGTAGAGCAGAACAAACTGCTGGCTAGGGC...TCCCAGCCCTATAGAGGCGGTTCTGCAAGGAAATAAACAAATGCTGTCCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp GGATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: GCAIHCGTRKKQPPQDVVTLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...AACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFTLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSTLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAGCAATCAGCTGCCTTaGCTGCTTATTCGCATCGAT +
Preference number: 5 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKSNQLP*LLIRID
Trigger: ATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCT...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAAAGATTTCTCTGTTCTaGTTTTCTAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLKISLF*FSSSAI
Trigger: GATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGAAGATTTCTCTGTTCTaGTTTTCTAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: SPPPLIWRCGGGLAVLDQKISLF*FSSSAI
Trigger: GATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT...CTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCTTGTGCAAATGCCTCTaGTACATCTCCCCCTACTCC +
Preference number: 5 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFLCKCL*YISPYS
Trigger: GGAGTAGGGGGAGATGTACAAGAGGCATTTGCACAA...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTGTGCAAATGCCTCTaGTACATCTCCCCCTACTCC +
Preference number: 5 (lower is better)
Translates to: TKGNAATKGCWIYKIYLRLCKCL*YISPYS
Trigger: GGAGTAGGGGGAGATGTACAAGAGGCATTTGCACAA...CCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTCTGATAAGCTTCATCTaGCAGCTTCTGTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPLISFI*QLLFQV
Trigger: TACCTGAAACAGAAGCTGCAAGATGAAGCTTATCAG...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTACTGATAAGCTTCATCTaGCAGCTTCTGTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLLISFI*QLLFQV
Trigger: TACCTGAAACAGAAGCTGCAAGATGAAGCTTATCAG...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCATATTGCATTCAACCTaGCAAGCTGACCTGATAAGC +
Preference number: 5 (lower is better)
Translates to: TISSTTPSDQPNLPQLPSILHST*QADLIS
Trigger: GCTTATCAGGTCAGCTTGCAAGGTTGAATGCAATAT...GGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCTTCCTCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTATGTGATAAAAGGATATaGCATTCAACCTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: PSSPPPLIWRCGGGLAVLCDKRI*HSTLQA
Trigger: AGCTTGCAAGGTTGAATGCAATATCCTTTTATCACA...TAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: SFIEQHPQNRNRRPISVVDAIQI*SPHLCK
Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...CACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp TGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: WVNGYHAPWRNQNSSKYYDAIQI*SPHLCK
Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...ATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp ATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: IIIFWVNGYHAPWRNQNSVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...GCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTAGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTTCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSSKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLSKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GGATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTCTGCTCCACATGGATTaGGTGAGTGGTTGGCATCCG +
Preference number: 5 (lower is better)
Translates to: GCAIHCGTRKKQPPQDVVLLHMD*VSGWHP
Trigger: CGGATGCCAACCACTCACCAAATCCATGTGGAGCAG...AACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GTGAGCCAAGTTGAGTGGCTTCTCAGGCTGATCTGGGAACATGGGGTGCAAAGGGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATT +
Preference number: 5 (lower is better)
Translates to: VSQVEWLLRLIWEHGVQRVAKAI*TANTEI
Trigger: AATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCAC...CCTTTGCACCCCATGTTCCCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679372.1
ENST00000681065.1
CDS-3UTR CAA 90 bp AAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAAACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: KATCRTPGGQLRQSTFRKTAVGS*RTSRRN
Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGT...TTTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR CAA 90 bp CCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAAACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: PFFTISSTTPSDQPNLPQTAVGS*RTSRRN
Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGT...TTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp ATCCTGCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGAGACATTTTCCACATTaGCTAGTCGATGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: ILLPGKWPGKYPQGKWLKRHFPH*LVDAEE
Trigger: CTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCT...CTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTAGACATTTTCCACATTaGCTAGTCGATGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVRHFPH*LVDAEE
Trigger: CTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCT...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGGTAATTGTGACACTGTaGGCATCGGTAGCGAAATCC +
Preference number: 5 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKVIVTL*ASVAKS
Trigger: GGATTTCGCTACCGATGCCAACAGTGTCACAATTAC...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp ACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGACTGCTCACAGAGACTaGGAGTCAACTACAGACCGT +
Preference number: 5 (lower is better)
Translates to: TKGNAATKGCWIYKIYLRTAHRD*ESTTDR
Trigger: ACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAGT...CCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGGCCCTCTAAAGAGGGTCCTTGGAAAAGACTATCCCAGTCTTTTATCCTCTTGAAGGAGAGCAAACGTTaGCAAGCGCACTTTAAGCCT +
Preference number: 5 (lower is better)
Translates to: GPSKEGPWKRLSQSFILLKESKR*QAHFKP
Trigger: AGGCTTAAAGTGCGCTTGCAAACGTTTGCTCTCCTT...CAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTATCACAGAACCTTTCTaGCTTATTCTGAATAAGGCC +
Preference number: 5 (lower is better)
Translates to: CGSLRGIEPRGMQQPKVAITEPF*LILNKA
Trigger: GGCCTTATTCAGAATAAGCAAGAAAGGTTCTGTGAT...AGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGGCCCTCTAAAGAGGGTCCTTGGAAAAGACTATCCCAGTCTTTTATCCTCTTGCTACCAACTACGAACTaGGTGTGTGGGTTCAGAGAA +
Preference number: 5 (lower is better)
Translates to: GPSKEGPWKRLSQSFILLLPTTN*VCGFRE
Trigger: TTCTCTGAACCCACACACCAAGTTCGTAGTTGGTAG...CAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGGCCCTCTAAAGAGGGTCCTTGGAAAAGACTATCCCAGTCTTTTATCCTCTTGTGTGCTCAGAGACATTaGTCAGGTGAGTTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: GPSKEGPWKRLSQSFILLCAQRH*SGEFSG
Trigger: TCCAGAGAACTCACCTGACAAATGTCTCTGAGCACA...CAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTACTGAGAACTGTGCAGTaGTGCCACTTTGGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLLRTVQ*CHFGVS
Trigger: GCTGACACCAAAGTGGCACAACTGCACAGTTCTCAG...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGGTCAGAAATTGGTCATaGGCGGCAGTTTCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: TKGNAATKGCWIYKIYLRVRNWS*AAVSRV
Trigger: GACTCTGGAAACTGCCGCCAATGACCAATTTCTGAC...CCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCATAACACACGCCATTTaGTCTCGCTTACAGGACAGG +
Preference number: 5 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTITHAI*SRLQDR
Trigger: CCTGTCCTGTAAGCGAGACAAAATGGCGTGTGTTAT...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCCCCTCCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGGATGTGCAATTCATaGTGGAACAAGAAAGAAACA +
Preference number: 5 (lower is better)
Translates to: SPPPLIWRCGGGLAVLDQWMCNS*WNKKET
Trigger: TGTTTCTTTCTTGTTCCACAATGAATTGCACATCCA...CTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TTTTGTCTCGCTTACAGGACAGGGGTGCTCGAGTCTGGTCTCAGTGCTGACGTGTGGATGTGCAATTCATaGTGGAACAAGAAAGAAACA +
Preference number: 5 (lower is better)
Translates to: FCLAYRTGVLESGLSADVWMCNS*WNKKET
Trigger: TGTTTCTTTCTTGTTCCACAATGAATTGCACATCCA...CACGTCAGCACTGAGACCAGACTCGAGCACCCCTGTCCTGTAAGCGAGACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTTGCAGCAACCAAAGGTaGCTGGATTTACAAGATCTA +
Preference number: 5 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVCSNQR*LDLQDL
Trigger: TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCA...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCTCACTTGTGGCTCCTaGCGTGGAATCGAACCAAGG +
Preference number: 5 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSLTCGS*RGIEPR
Trigger: CCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAG...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GAGAGCACAGCCTCTAAGCGGGACACGTTGAGTTCAGTGTTTGGGTCCAGGTTGTCTTTGAAATGGCAGTaGATTATGGCACTTAAAGAC +
Preference number: 5 (lower is better)
Translates to: ESTASKRDTLSSVFGSRLSLKWQ*IMALKD
Trigger: GTCTTTAAGTGCCATAATCAACTGCCATTTCAAAGA...CAACCTGGACCCAAACACTGAACTCAACGTGTCCCGCTTAGAGGCTGTGCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CAA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGATCCCCCTGCTGGCTCTaGAGCCTGACCACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: CGISLLREGSDQQLEKLRSPCWL*SLTTGS
Trigger: TGAACCTGTGGTCAGGCTCAAGAGCCAGCAGGGGGA...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACGAAATGAAAGATACGTaGAAATTGGACAGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYEMKDT*KLDRLW
Trigger: CCACAACCTGTCCAATTTCAACGTATCTTTCATTTC...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp ATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: IIIFWVNGYHAPWRNQNSAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...GCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CAA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GTGCAAAAATCCCAACTCAACTTAGAAGAGCCTGTCTCCTTTCACATGACCACAGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: VQKSQLNLEEPVSFHMTTAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...TGTGGTCATGTGAAAGGAGACAGGCTCTTCTAAGTTGAGTTGGGATTTTTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATCTACTTCACTGTCCTaGGGAGGAGAGCGTGCACCG +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVISTSLS*GGERAP
Trigger: CGGTGCACGCTCTCCTCCCAAGGACAGTGAAGTAGA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269192.11
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKTLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: DCGISLLREGSDQQLEKLTLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp ACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGAGCAATCAGCTGCCTTaGCTGCTTATTCGCATCGAT +
Preference number: 5 (lower is better)
Translates to: TKGNAATKGCWIYKIYLRSNQLP*LLIRID
Trigger: ATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCT...CCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACAAGATTTCTCTGTTCTaGTTTTCTAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYKISLF*FSSSAI
Trigger: GATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000681274.1
CDS-3UTR CAA 90 bp AAAGTATGTAATGACCCTCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAGATTTCTCTGTTCTaGTTTTCTAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: KVCNDPLVSRSRKALVLRKISLF*FSSSAI
Trigger: GATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT...CCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGAGGGTCATTACATACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVICSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATTGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDCSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCTGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFCSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS-3UTR CAA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGTTGTGCAAATGCCTCTaGTACATCTCCCCCTACTCC +
Preference number: 5 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKLCKCL*YISPYS
Trigger: GGAGTAGGGGGAGATGTACAAGAGGCATTTGCACAA...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCCAAAACGAGAGGAACAAGACCATGGAAGAGCAGAGATAACTTTAGTCCGTTTTTGTGCAAATGCCTCTaGTACATCTCCCCCTACTCC +
Preference number: 5 (lower is better)
Translates to: AKTRGTRPWKSRDNFSPFLCKCL*YISPYS
Trigger: GGAGTAGGGGGAGATGTACAAGAGGCATTTGCACAA...AAACGGACTAAAGTTATCTCTGCTCTTCCATGGTCTTGTTCCTCTCGTTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAACTGATAAGCTTCATCTaGCAGCTTCTGTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: MPFLLRTVEFSLVAPCVELISFI*QLLFQV
Trigger: TACCTGAAACAGAAGCTGCAAGATGAAGCTTATCAG...TTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGACTGATAAGCTTCATCTaGCAGCTTCTGTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGLISFI*QLLFQV
Trigger: TACCTGAAACAGAAGCTGCAAGATGAAGCTTATCAG...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AGTTGTGCCACTTTGGTGTCAGCCTGTGCTCAGAGACATTTGTCAGGTGAGTTCCTGATAAGCTTCATCTaGCAGCTTCTGTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: SCATLVSACAQRHLSGEFLISFI*QLLFQV
Trigger: TACCTGAAACAGAAGCTGCAAGATGAAGCTTATCAG...GAACTCACCTGACAAATGTCTCTGAGCACAGGCTGACACCAAAGTGGCACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATATTGCATTCAACCTaGCAAGCTGACCTGATAAGC +
Preference number: 5 (lower is better)
Translates to: WRRVGCVRPVLINRLSALILHST*QADLIS
Trigger: GCTTATCAGGTCAGCTTGCAAGGTTGAATGCAATAT...CAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGTGATAAAAGGATATaGCATTCAACCTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: LWLLAWNRTKGNAATKGCCDKRI*HSTLQA
Trigger: AGCTTGCAAGGTTGAATGCAATATCCTTTTATCACA...GCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACATCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: GNAATKGCWIYKIYLRLTSKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...TGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTTCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: PVLINRLSALMEMDVQFISKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTGCTCCACATGGATTaGGTGAGTGGTTGGCATCCG +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKLLHMD*VSGWHP
Trigger: CGGATGCCAACCACTCACCAAATCCATGTGGAGCAG...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTTAVGS*RTSRRN
Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGT...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp AATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGAGACATTTTCCACATTaGCTAGTCGATGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: NMALWRRVGCVRPVLINRRHFPH*LVDAEE
Trigger: CTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCT...CCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTAGACATTTTCCACATTaGCTAGTCGATGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFRHFPH*LVDAEE
Trigger: CTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp CTTGCTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAGACATTTTCCACATTaGCTAGTCGATGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: LAGFALRTGPKSKSGEPRRHFPH*LVDAEE
Trigger: CTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCT...CCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCTCC +
Preference number: 5 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNLHQAG*NSQACS
Trigger: GGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTAAGGCCTCCAAACAACTaGATGGGGGAACTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLRPPNN*MGELVN
Trigger: GTTCACAAGTTCCCCCATCAAGTTGTTTGGAGGCCT...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTCCGGGGAACACACTTaGAGAACTATTGTTCTAAAA +
Preference number: 5 (lower is better)
Translates to: TISSTTPSDQPNLPQLPSSGEHT*RTIVLK
Trigger: TTTTAGAACAATAGTTCTCAAAGTGTGTTCCCCGGA...GGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCTACCAACTACGAACTaGGTGTGTGGGTTCAGAGAA +
Preference number: 5 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFLPTTN*VCGFRE
Trigger: TTCTCTGAACCCACACACCAAGTTCGTAGTTGGTAG...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCATTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCACCCAAGGCAAGTGATTaGGTTTCAAAGGGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: SFKNPFFTISSTTPSDQPPKASD*VSKGSQ
Trigger: TTGGCTGCCCTTTGAAACCAAATCACTTGCCTTGGG...TGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAATGCAGTTGTGCCACTTaGGTGTCAGCCTGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: INRLSALMEMDVQFIVEQCSCAT*VSACAQ
Trigger: CTGAGCACAGGCTGACACCAAAGTGGCACAACTGCA...TTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AAAGAAAACAACCTCGAGTTGGAAAGAGGCCCCAAAGAATGGATTATTCCTGGTCTGAGAACTGTGCAGTaGTGCCACTTTGGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: KENNLELERGPKEWIIPGLRTVQ*CHFGVS
Trigger: GCTGACACCAAAGTGGCACAACTGCACAGTTCTCAG...ACCAGGAATAATCCATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGCAGCAACCAAAGGTaGCTGGATTTACAAGATCTA +
Preference number: 5 (lower is better)
Translates to: CGGGLAVLDQCLLTGYQLCSNQR*LDLQDL
Trigger: TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCA...GAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTCTCACTTGTGGCTCCTaGCGTGGAATCGAACCAAGG +
Preference number: 5 (lower is better)
Translates to: MCNSLWNKKETTPARCSCLTCGS*RGIEPR
Trigger: CCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAG...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGCAGTGGAGTTCTCACTaGTGGCTCCTTGCGTGGAAT +
Preference number: 5 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKQWSSH*WLLAWN
Trigger: ATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTG...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAGTGGAGTTCTCACTaGTGGCTCCTTGCGTGGAAT +
Preference number: 5 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSQWSSH*WLLAWN
Trigger: ATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTG...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCTCGTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTCTTTGAAATGGCAGTaGATTATGGCACTTAAAGAC +
Preference number: 5 (lower is better)
Translates to: SRLPEPKGSGAKEKAESYSLKWQ*IMALKD
Trigger: GTCTTTAAGTGCCATAATCAACTGCCATTTCAAAGA...GTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGACGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598774.6
ENST00000679936.1
CDS-3UTR CAA 90 bp AGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATCTTTGAAATGGCAGTaGATTATGGCACTTAAAGAC +
Preference number: 5 (lower is better)
Translates to: RTVEFSLVAPCVESNQGESLKWQ*IMALKD
Trigger: GTCTTTAAGTGCCATAATCAACTGCCATTTCAAAGA...TTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000681470.1
CDS-3UTR CAA 90 bp ATCCTGCTGCCTGGGAAATGGCCTGGAAAGTATCCCCAAGGGAAATGGCTAAAGGCGTGGTACATGCACTaGAAATTAAAGCTGCTTTTA +
Preference number: 5 (lower is better)
Translates to: ILLPGKWPGKYPQGKWLKAWYMH*KLKLLL
Trigger: TAAAAGCAGCTTTAATTTCAAGTGCATGTACCACGC...CTTTAGCCATTTCCCTTGGGGATACTTTCCAGGCCATTTCCCAGGCAGCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAAGTGAGTGGGATATATaGTCATACATAGCGTGGTAC +
Preference number: 5 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKSEWDI*SYIAWY
Trigger: GTACCACGCTATGTATGACAATATATCCCACTCACT...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTAGTGAGTGGGATATATaGTCATACATAGCGTGGTAC +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFSEWDI*SYIAWY
Trigger: GTACCACGCTATGTATGACAATATATCCCACTCACT...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: PVLINRLSALMEMDVQFIAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCTTTGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: QNRNRRPISVVTERNVSFAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...AAAGCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315456.10
ENST00000554864.7
ENST00000679731.1
CDS-3UTR CAA 90 bp ATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTTGTTCCGGAGCATGTaGACATACAACCCGATGAGA +
Preference number: 5 (lower is better)
Translates to: IEPRGMQQPKVAGFTRSILFRSM*TYNPMR
Trigger: TCTCATCGGGTTGTATGTCAACATGCTCCGGAACAA...GATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679796.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVITLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: CGISLLREGSDQQLEKLRTLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAGCAATCAGCTGCCTTaGCTGCTTATTCGCATCGAT +
Preference number: 5 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKSNQLP*LLIRID
Trigger: ATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCT...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCATTCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAGCAATCAGCTGCCTTaGCTGCTTATTCGCATCGAT +
Preference number: 5 (lower is better)
Translates to: SFKNPFFTISSTTPSDQPSNQLP*LLIRID
Trigger: ATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCT...TGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCATATTGCATTCAACCTaGCAAGCTGACCTGATAAGC +
Preference number: 5 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTILHST*QADLIS
Trigger: GCTTATCAGGTCAGCTTGCAAGGTTGAATGCAATAT...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTGTCTGACTATAGCTaGCTTGAGAGGAGTGTGATA +
Preference number: 5 (lower is better)
Translates to: PFFTISSTTPSDQPNLPQLSDYS*LERSVI
Trigger: TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAG...TTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AAAAGGGAAATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: KREIIIFWVNGYHAPWRNVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...GTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTATTTCCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTATCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: DCGISLLREGSDQQLEKLSKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTTCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: MCNSLWNKKETTPARCSCSKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGTCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKSKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGACTGCTCCACATGGATTaGGTGAGTGGTTGGCATCCG +
Preference number: 5 (lower is better)
Translates to: CGISLLREGSDQQLEKLRLLHMD*VSGWHP
Trigger: CGGATGCCAACCACTCACCAAATCCATGTGGAGCAG...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp CCTCCATTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTAGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATT +
Preference number: 5 (lower is better)
Translates to: PPLIWRCGGGLAVLDQCLVAKAI*TANTEI
Trigger: AATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCAC...TAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAATGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp AGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGAACTTCCCGAAGGAATaGGTCATATCGTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: RRVGCVRPVLINRLSALMNFPKE*VISSIN
Trigger: GTTTATGGACGATATGACCAATTCCTTCGGGAAGTT...CATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GAAGGCTACATGCAGAACACCAGGTGGCCAGCTAAGGCAATCAACATTCAGAAAAACTTCCCGAAGGAATaGGTCATATCGTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: EGYMQNTRWPAKAINIQKNFPKE*VISSIN
Trigger: GTTTATGGACGATATGACCAATTCCTTCGGGAAGTT...TTTCTGAATGTTGATTGCCTTAGCTGGCCACCTGGTGTTCTGCATGTAGCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR CAA 90 bp CAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCTTTACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: QNRNRRPISVVTERNVSFTAVGS*RTSRRN
Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGT...AAAGCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: PVLINRLSALMEMDVQFITAVGS*RTSRRN
Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGT...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp CTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAAAGACATTTTCCACATTaGCTAGTCGATGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: LSSKDSGVLTCGSLRGIERHFPH*LVDAEE
Trigger: CTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCT...TTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGGTAATTGTGACACTGTaGGCATCGGTAGCGAAATCC +
Preference number: 5 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKVIVTL*ASVAKS
Trigger: GGATTTCGCTACCGATGCCAACAGTGTCACAATTAC...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCTCC +
Preference number: 5 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFLHQAG*NSQACS
Trigger: GGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACAGGCCTCCAAACAACTaGATGGGGGAACTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNRPPNN*MGELVN
Trigger: GTTCACAAGTTCCCCCATCAAGTTGTTTGGAGGCCT...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTAAGGAGAGCAAACGTTaGCAAGCGCACTTTAAGCCT +
Preference number: 5 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTKESKR*QAHFKP
Trigger: AGGCTTAAAGTGCGCTTGCAAACGTTTGCTCTCCTT...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCTTTGATAGCTCTTTaGCACTTCAGCTTTTCACTG +
Preference number: 5 (lower is better)
Translates to: MPFLLRTVEFSLVAPCVESLIAL*HFSFSL
Trigger: CAGTGAAAAGCTGAAGTGCAAAAGAGCTATCAAAGA...TTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCGAACCATCTTTGATAGCTCTTTaGCACTTCAGCTTTTCACTG +
Preference number: 5 (lower is better)
Translates to: SSKDSGVLTCGSLRGIEPSLIAL*HFSFSL
Trigger: CAGTGAAAAGCTGAAGTGCAAAAGAGCTATCAAAGA...TGGTTCGATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGTCCGGGGAACACACTTaGAGAACTATTGTTCTAAAA +
Preference number: 5 (lower is better)
Translates to: NMALWRRVGCVRPVLINRSGEHT*RTIVLK
Trigger: TTTTAGAACAATAGTTCTCAAAGTGTGTTCCCCGGA...CCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCGAATCACCTAGAGGGTaGACTAAAACAGACTTCTGG +
Preference number: 5 (lower is better)
Translates to: NPFFTISSTTPSDQPNLPESPRG*TKTDFW
Trigger: CCAGAAGTCTGTTTTAGTCAACCCTCTAGGTGATTC...GGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTATCACAGAACCTTTCTaGCTTATTCTGAATAAGGCC +
Preference number: 5 (lower is better)
Translates to: PLTNQTYPNFRPDQPQLFITEPF*LILNKA
Trigger: GGCCTTATTCAGAATAAGCAAGAAAGGTTCTGTGAT...AAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTGTTCAGAGAAGGTTTTaGCCAGCCCCAGAAGCAAAA +
Preference number: 5 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSVQRRF*PAPEAK
Trigger: TTTTGCTTCTGGGGCTGGCAAAAACCTTCTCTGAAC...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCCGTCCTTGGATGTGCAATTCATaGTGGAACAAGAAAGAAACA +
Preference number: 5 (lower is better)
Translates to: QSPAQLPLTNQTYPNFRPWMCNS*WNKKET
Trigger: TGTTTCTTTCTTGTTCCACAATGAATTGCACATCCA...AGGACGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACTTGTGGCTCCTTGCGTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTTGGATGTGCAATTCATaGTGGAACAAGAAAGAAACA +
Preference number: 5 (lower is better)
Translates to: TCGSLRGIEPRGMQQPKVWMCNS*WNKKET
Trigger: TGTTTCTTTCTTGTTCCACAATGAATTGCACATCCA...AACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCACGCAAGGAGCCACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACTCACTTGTGGCTCCTaGCGTGGAATCGAACCAAGG +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVILTCGS*RGIEPR
Trigger: CCTTGGTTCGATTCCACGCAAGGAGCCACAAGTGAG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTCAGTGGAGTTCTCACTaGTGGCTCCTTGCGTGGAAT +
Preference number: 5 (lower is better)
Translates to: MCNSLWNKKETTPARCSCQWSSH*WLLAWN
Trigger: ATTCCACGCAAGGAGCCACAAGTGAGAACTCCACTG...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGCGTGGTACATGCACTaGAAATTAAAGCTGCTTTTA +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFAWYMH*KLKLLL
Trigger: TAAAAGCAGCTTTAATTTCAAGTGCATGTACCACGC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTGATGGCATTTGCGCATaGTCTGAAAGGATTCTAAAT +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFDGICA*SERILN
Trigger: ATTTAGAATCCTTTCAGACAATGCGCAAATGCCATC...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679936.1
CDS GCA 90 bp TTTGGAAGAAATCCTTTTTCAGTGCTGATTCTGAGTCTGGAAGTTTaGTCAATGCTCGGAAAAGAGTTTCCGAACAAGCTGCCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: FGRNPFSVLILSLEV*SMLGKEFPNKLPPA
Trigger: AGCAGGAGGCAGCTTGTTCGGAAACTCTTTTCCGAGCATTGAGCAAACTTCCAGACTCAGAATCAGCACTGAAAAAGGATTTCTTCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683876.1
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGCCCTAGCCAGCAGTTaGTTCTGCTCTACTTCACTG +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIALASS*FCSTSL
Trigger: CAGTGAAGTAGAGCAGAACAAACTGCTGGCTAGGGC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269192.11
ENST00000591182.5
CDS-3UTR CAA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTACTCTGCTGCCAGCCTaGCCGCATACCTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: SFLKHTPMHYKSENKKLATLLPA*PHTWQL
Trigger: TAATTGCCAGGTATGCGGCAAGGCTGGCAGCAGAGT...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTCAGCAATCAGCTGCCTTaGCTGCTTATTCGCATCGAT +
Preference number: 5 (lower is better)
Translates to: NQSVQRNLRTVQLCHFGVSNQLP*LLIRID
Trigger: ATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCT...GACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTAGCAATCAGCTGCCTTaGCTGCTTATTCGCATCGAT +
Preference number: 5 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFSNQLP*LLIRID
Trigger: ATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCT...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAAAGATTTCTCTGTTCTaGTTTTCTAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: NALSSKDSGVLTCGSLRGKISLF*FSSSAI
Trigger: GATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT...TCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTTGTTCCAGCTCATCTTaGCGCTGTCTGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFCSSSS*RCLRSR
Trigger: CCGGCTCCTCAGACAGCGCAAAGATGAGCTGGAACA...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp CCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGTCCTTAAGTTTCTTCTaGAACTTTGTGCAAATGCCT +
Preference number: 5 (lower is better)
Translates to: PESHAVDFTFLPSSINMASLSFF*NFVQMP
Trigger: AGGCATTTGCACAAAGTTCAAGAAGAAACTTAAGGA...CGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCCTTAAGTTTCTTCTaGAACTTTGTGCAAATGCCT +
Preference number: 5 (lower is better)
Translates to: MPFLLRTVEFSLVAPCVESLSFF*NFVQMP
Trigger: AGGCATTTGCACAAAGTTCAAGAAGAAACTTAAGGA...TTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACAAGCCTTTTCAGAGGTaGGTGAGGGAACAAGATCCT +
Preference number: 5 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNKPFQR*VREQDP
Trigger: AGGATCTTGTTCCCTCACCAACCTCTGAAAAGGCTT...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTAAGCCTTTTCAGAGGTaGGTGAGGGAACAAGATCCT +
Preference number: 5 (lower is better)
Translates to: GCAIHCGTRKKQPPQDVVKPFQR*VREQDP
Trigger: AGGATCTTGTTCCCTCACCAACCTCTGAAAAGGCTT...AACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTGATAAGCTTCATCTaGCAGCTTCTGTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: PFFTISSTTPSDQPNLPQLISFI*QLLFQV
Trigger: TACCTGAAACAGAAGCTGCAAGATGAAGCTTATCAG...TTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATATTGCATTCAACCTaGCAAGCTGACCTGATAAGC +
Preference number: 5 (lower is better)
Translates to: LFPESHAVDFTFLPSSINILHST*QADLIS
Trigger: GCTTATCAGGTCAGCTTGCAAGGTTGAATGCAATAT...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: MCNSLWNKKETTPARCSCDAIQI*SPHLCK
Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKDAIQI*SPHLCK
Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
CDS-3UTR CAA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: CGISLLREGSDQQLEKLRVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVISKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR CAA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTCTGCTCCACATGGATTaGGTGAGTGGTTGGCATCCG +
Preference number: 5 (lower is better)
Translates to: SFLKHTPMHYKSENKKLALLHMD*VSGWHP
Trigger: CGGATGCCAACCACTCACCAAATCCATGTGGAGCAG...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR CAA 90 bp TGCTGGCTCTTGAGCCTGACCACAGGTTCAGACAGCTCCAGTTTAGGCTATAAAGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATT +
Preference number: 5 (lower is better)
Translates to: CWLLSLTTGSDSSSLGYKVAKAI*TANTEI
Trigger: AATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCAC...TTTATAGCCTAAACTGGAGCTGTCTGAACCTGTGGTCAGGCTCAAGAGCCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000681274.1
CDS-3UTR CAA 90 bp AATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATT +
Preference number: 5 (lower is better)
Translates to: NMALWRRVGCVRPVLINRVAKAI*TANTEI
Trigger: AATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCAC...CCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATT +
Preference number: 5 (lower is better)
Translates to: ESHAVDFTFLPSSINMALVAKAI*TANTEI
Trigger: AATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCAC...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp AACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCAACTTCCCGAAGGAATaGGTCATATCGTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: NPFFTISSTTPSDQPNLPNFPKE*VISSIN
Trigger: GTTTATGGACGATATGACCAATTCCTTCGGGAAGTT...GGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp AGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCTTTAAACAAACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: RNRRPISVVTERNVSFKQTAVGS*RTSRRN
Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGT...TTGTTTAAAGCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKTAVGS*RTSRRN
Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: DCGISLLREGSDQQLEKLTAVGS*RTSRRN
Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGT...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp CTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAAACACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: LSALMEMDVQFIVEQERNTAVGS*RTSRRN
Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGT...GTTTCTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp CCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAAAGACATTTTCCACATTaGCTAGTCGATGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: PFFTISSTTPSDQPNLPQRHFPH*LVDAEE
Trigger: CTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCT...TTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp AGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGAGACATTTTCCACATTaGCTAGTCGATGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: SFIEQHPQNRNRRPISVVRHFPH*LVDAEE
Trigger: CTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCT...CACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp GGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATAGGAATATTTGTAATTGTGACACTGTaGGCATCGGTAGCGAAATCC +
Preference number: 5 (lower is better)
Translates to: GTMHPGGTRTAQSIIGIFVIVTL*ASVAKS
Trigger: GGATTTCGCTACCGATGCCAACAGTGTCACAATTAC...AAATATTCCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGGTAATTGTGACACTGTaGGCATCGGTAGCGAAATCC +
Preference number: 5 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKVIVTL*ASVAKS
Trigger: GGATTTCGCTACCGATGCCAACAGTGTCACAATTAC...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp AAAGAAAACAACCTCGAGTTGGAAAGAGGCCCCAAAGAATGGATTATTCCTGGTGTAATTGTGACACTGTaGGCATCGGTAGCGAAATCC +
Preference number: 5 (lower is better)
Translates to: KENNLELERGPKEWIIPGVIVTL*ASVAKS
Trigger: GGATTTCGCTACCGATGCCAACAGTGTCACAATTAC...ACCAGGAATAATCCATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCTCC +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKLHQAG*NSQACS
Trigger: GGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000597674.5
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp GAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATGGCGCTGAATTCTTCAGGGTTATaGAATGATTGCAAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: ESHAVDFTFLPSSINMALNSSGL*NDCKWL
Trigger: CAACCACTTGCAATCATTCAATAACCCTGAAGAATT...CAGCGCCATATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTTTCCGGGCTCTGAGTTaGTACACTCAGGAACCAAAT +
Preference number: 5 (lower is better)
Translates to: PVLINRLSALMEMDVQFIFRALS*YTQEPN
Trigger: ATTTGGTTCCTGAGTGTACAAACTCAGAGCCCGGAA...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGTTCCGGGCTCTGAGTTaGTACACTCAGGAACCAAAT +
Preference number: 5 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKFRALS*YTQEPN
Trigger: ATTTGGTTCCTGAGTGTACAAACTCAGAGCCCGGAA...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTACTGCTCACAGAGACTaGGAGTCAACTACAGACCGT +
Preference number: 5 (lower is better)
Translates to: MCNSLWNKKETTPARCSCTAHRD*ESTTDR
Trigger: ACGGTCTGTAGTTGACTCCAAGTCTCTGTGAGCAGT...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTTTATTCCTGGTGTGTTaGGTTCAAGTCACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSLFLVC*VQVTAH
Trigger: GTGAGCAGTGACTTGAACCAAACACACCAGGAATAA...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATTATTCCTGGTGTGTTaGGTTCAAGTCACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLLFLVC*VQVTAH
Trigger: GTGAGCAGTGACTTGAACCAAACACACCAGGAATAA...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACATAACTTTAGTCCGTTaGGGGATCTTATGGCACCTG +
Preference number: 5 (lower is better)
Translates to: GECSNQRLLDLQDLSTVNITLVR*GILWHL
Trigger: CAGGTGCCATAAGATCCCCAAACGGACTAAAGTTAT...GTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTATAACTTTAGTCCGTTaGGGGATCTTATGGCACCTG +
Preference number: 5 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTITLVR*GILWHL
Trigger: CAGGTGCCATAAGATCCCCAAACGGACTAAAGTTAT...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAACCCACCTCTTTGATAGCTCTTTaGCACTTCAGCTTTTCACTG +
Preference number: 5 (lower is better)
Translates to: HLEQAPKVNLESQGKKPTSLIAL*HFSFSL
Trigger: CAGTGAAAAGCTGAAGTGCAAAAGAGCTATCAAAGA...GGTGGGTTTCTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGTCCGGGGAACACACTTaGAGAACTATTGTTCTAAAA +
Preference number: 5 (lower is better)
Translates to: RVGCVRPVLINRLSALMESGEHT*RTIVLK
Trigger: TTTTAGAACAATAGTTCTCAAAGTGTGTTCCCCGGA...CTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTGAATCACCTAGAGGGTaGACTAAAACAGACTTCTGG +
Preference number: 5 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSESPRG*TKTDFW
Trigger: CCAGAAGTCTGTTTTAGTCAACCCTCTAGGTGATTC...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGGCCCTCTAAAGAGGGTCCTTGGAAAAGACTATCCCAGTCTTTTATCCTCTTGATCACAGAACCTTTCTaGCTTATTCTGAATAAGGCC +
Preference number: 5 (lower is better)
Translates to: GPSKEGPWKRLSQSFILLITEPF*LILNKA
Trigger: GGCCTTATTCAGAATAAGCAAGAAAGGTTCTGTGAT...CAAGAGGATAAAAGACTGGGATAGTCTTTTCCAAGGACCCTCTTTAGAGGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTGGTTAGTCAGAAATaGGTCATTGGCGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: NRTKGNAATKGCWIYKIYLVSQK*VIGGSF
Trigger: GAAACTGCCGCCAATGACCAATTTCTGACTAACCAG...ATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGCTGGTTAGTCAGAAATaGGTCATTGGCGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKLVSQK*VIGGSF
Trigger: GAAACTGCCGCCAATGACCAATTTCTGACTAACCAG...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTATAACACACGCCATTTaGTCTCGCTTACAGGACAGG +
Preference number: 5 (lower is better)
Translates to: GCAIHCGTRKKQPPQDVVITHAI*SRLQDR
Trigger: CCTGTCCTGTAAGCGAGACAAAATGGCGTGTGTTAT...AACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCTGCAGCAACCAAAGGTaGCTGGATTTACAAGATCTA +
Preference number: 5 (lower is better)
Translates to: NPFFTISSTTPSDQPNLPCSNQR*LDLQDL
Trigger: TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCA...GGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ATGCCCTTTCTTCTAAGGACAGTGGAGTTCTCACTTGTGGCTCCTTGCGTGGAATCTTTGAAATGGCAGTaGATTATGGCACTTAAAGAC +
Preference number: 5 (lower is better)
Translates to: MPFLLRTVEFSLVAPCVESLKWQ*IMALKD
Trigger: GTCTTTAAGTGCCATAATCAACTGCCATTTCAAAGA...TTCCACGCAAGGAGCCACAAGTGAGAACTCCACTGTCCTTAGAAGAAAGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GTCTCCCGGAGCCGAAAGGCTCTGGTGCTAAGGAAAAAGCTGAGAGTTACTTTTTCTTTGAAATGGCAGTaGATTATGGCACTTAAAGAC +
Preference number: 5 (lower is better)
Translates to: VSRSRKALVLRKKLRVTFSLKWQ*IMALKD
Trigger: GTCTTTAAGTGCCATAATCAACTGCCATTTCAAAGA...AAAAGTAACTCTCAGCTTTTTCCTTAGCACCAGAGCCTTTCGGCTCCGGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000598774.6
ENST00000679936.1
CDS TCA 90 bp TCCAAAGACCTAGGTTGCAAATCTGGCTCTTCTACGACAAGTGCATaGCCTCTAAGACTTAGAGTCTCACTTCCTTCATCTATGAAATGG +
Preference number: 5 (lower is better)
Translates to: SKDLGCKSGSSTTSA*PLRLRVSLPSSMKW
Trigger: CCATTTCATAGATGAAGGAAGTGAGACTCTAAGTCTTAGAGGTCATGCACTTGTCGTAGAAGAGCCAGATTTGCAACCTAGGTCTTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682581.1
CDS TCA 90 bp GACTTGAACAGGTCTGTCCTATTCAAGGACAAGTTCCTCAGGTTCTaGATGCTAAATCTGCCTTTGCTCCCAGATGAGGATGTACTTTTA +
Preference number: 5 (lower is better)
Translates to: DLNRSVLFKDKFLRF*MLNLPLLPDEDVLL
Trigger: TAAAAGTACATCCTCATCTGGGAGCAAAGGCAGATTTAGCATTCAGAACCTGAGGAACTTGTCCTTGAATAGGACAGACCTGTTCAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684377.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: CGISLLREGSDQQLEKLRAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp CAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAGCCCTAGCCAGCAGTTaGTTCTGCTCTACTTCACTG +
Preference number: 5 (lower is better)
Translates to: QRLLDLQDLSTVNSQELIALASS*FCSTSL
Trigger: CAGTGAAGTAGAGCAGAACAAACTGCTGGCTAGGGC...TATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679796.1
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTGTACTGTATCCCTTaGCCCTTCAGAAAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKLYCIP*PFRKAG
Trigger: TCCAGCTTTTCTGAAGGGCAAAGGGATACAGTACAG...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000679678.1
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCATG +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKLHQAG*NSQACM
Trigger: CATGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000679678.1
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGAGCAATCAGCTGCCTTaGCTGCTTATTCGCATCGAT +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKSNQLP*LLIRID
Trigger: ATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp AGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGAAGATTTCTCTGTTCTaGTTTTCTAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: RRVGCVRPVLINRLSALMKISLF*FSSSAI
Trigger: GATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT...CATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CTGGGTTTGCACTTAGAACAGGCCCCAAAAGTAAATCTGGAGAGCCAAGGAAAGAAGATTTCTCTGTTCTaGTTTTCTAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: LGLHLEQAPKVNLESQGKKISLF*FSSSAI
Trigger: GATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT...CTTTCCTTGGCTCTCCAGATTTACTTTTGGGGCCTGTTCTAAGTGCAAACCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATTGTGCAAATGCCTCTaGTACATCTCCCCCTACTCC +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVILCKCL*YISPYS
Trigger: GGAGTAGGGGGAGATGTACAAGAGGCATTTGCACAA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCCGAAGGAATTGGTCATATCGTCCATAAACCATCACCCCACTGGAGTCAGAAATCCTTAAGTTTCTTCTaGAACTTTGTGCAAATGCCT +
Preference number: 5 (lower is better)
Translates to: PEGIGHIVHKPSPHWSQKSLSFF*NFVQMP
Trigger: AGGCATTTGCACAAAGTTCAAGAAGAAACTTAAGGA...TTTCTGACTCCAGTGGGGTGATGGTTTATGGACGATATGACCAATTCCTTCGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CAA 90 bp AGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGTCCTTAAGTTTCTTCTaGAACTTTGTGCAAATGCCT +
Preference number: 5 (lower is better)
Translates to: RVGCVRPVLINRLSALMESLSFF*NFVQMP
Trigger: AGGCATTTGCACAAAGTTCAAGAAGAAACTTAAGGA...CTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGCTGATAAGCTTCATCTaGCAGCTTCTGTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: AATKGCWIYKIYLRLTAKLISFI*QLLFQV
Trigger: TACCTGAAACAGAAGCTGCAAGATGAAGCTTATCAG...CTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AACCAAACTTACCCCAACTTCCGTCCTGACCAACCACAACTGTTTCCTGAATCCTGTGATAAAAGGATATaGCATTCAACCTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: NQTYPNFRPDQPQLFPESCDKRI*HSTLQA
Trigger: AGCTTGCAAGGTTGAATGCAATATCCTTTTATCACA...GGATTCAGGAAACAGTTGTGGTTGGTCAGGACGGAAGTTGGGGTAAGTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGCTGTCTGACTATAGCTaGCTTGAGAGGAGTGTGATA +
Preference number: 5 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKLSDYS*LERSVI
Trigger: TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAG...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTCTGTCTGACTATAGCTaGCTTGAGAGGAGTGTGATA +
Preference number: 5 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFLSDYS*LERSVI
Trigger: TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAG...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTCTGTCTGACTATAGCTaGCTTGAGAGGAGTGTGATA +
Preference number: 5 (lower is better)
Translates to: GCAIHCGTRKKQPPQDVVLSDYS*LERSVI
Trigger: TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAG...AACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIDAIQI*SPHLCK
Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR CAA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR CAA 90 bp ATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: IHCGTRKKQPPQDVVVSNVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...ATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp ACAGAAAGAAATGTGAGCTTTAAACAACACAACTGTGGTTCACAGAGAACATTCTCTAAGCGGGACACGTaGAGTTCAGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: TERNVSFKQHNCGSQRTFSKRDT*SSVFGS
Trigger: GGACCCAAACACTGAACTCAACGTGTCCCGCTTAGA...GAATGTTCTCTGTGAACCACAGTTGTGTTGTTTAAAGCTCACATTTCTTTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp AGGGTTGGCTGTGTTAGACCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATT +
Preference number: 5 (lower is better)
Translates to: RVGCVRPVLINRLSALMEVAKAI*TANTEI
Trigger: AATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCAC...CTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGGTCTAACACAGCCAACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GCCAAAACGAGAGGAACAAGACCATGGAAGAGCAGAGATAACTTTAGTCCGTTTAACTTCCCGAAGGAATaGGTCATATCGTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: AKTRGTRPWKSRDNFSPFNFPKE*VISSIN
Trigger: GTTTATGGACGATATGACCAATTCCTTCGGGAAGTT...AAACGGACTAAAGTTATCTCTGCTCTTCCATGGTCTTGTTCCTCTCGTTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
CDS-3UTR CAA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCACTGCCGTGGGTAGTTaGAGAACTTCCCGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFTAVGS*RTSRRN
Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACGGCAGT...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS-3UTR CAA 90 bp ATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCAGACATTTTCCACATTaGCTAGTCGATGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: IEPRGMQQPKVAGFTRSIRHFPH*LVDAEE
Trigger: CTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCT...GATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGTAATTGTGACACTGTaGGCATCGGTAGCGAAATCC +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKVIVTL*ASVAKS
Trigger: GGATTTCGCTACCGATGCCAACAGTGTCACAATTAC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAGTAATTGTGACACTGTaGGCATCGGTAGCGAAATCC +
Preference number: 5 (lower is better)
Translates to: DCGISLLREGSDQQLEKLVIVTL*ASVAKS
Trigger: GGATTTCGCTACCGATGCCAACAGTGTCACAATTAC...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGACTTCATCAAGCCGGTTaGAACTCTCAAGCATGCTCC +
Preference number: 5 (lower is better)
Translates to: CGISLLREGSDQQLEKLRLHQAG*NSQACS
Trigger: GGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000597674.5
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp AATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATTTATTCCTGGTGTGTTaGGTTCAAGTCACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: NRTKGNAATKGCWIYKIYLFLVC*VQVTAH
Trigger: GTGAGCAGTGACTTGAACCAAACACACCAGGAATAA...ATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AAATCAATCTGTGCAAAGAAATCTGAGAACTGTGCAGTTGTGCCACTTTGGTGTGAAAACAACCTCGAGTaGGAAAGAGGCCCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: KSICAKKSENCAVVPLWCENNLE*ERGPKE
Trigger: TTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTC...ACACCAAAGTGGCACAACTGCACAGTTCTCAGATTTCTTTGCACAGATTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAACAACCTCGAGTaGGAAAGAGGCCCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: INRLSALMEMDVQFIVEQENNLE*ERGPKE
Trigger: TTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTC...TTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTAAGGAGAGCAAACGTTaGCAAGCGCACTTTAAGCCT +
Preference number: 5 (lower is better)
Translates to: MCNSLWNKKETTPARCSCKESKR*QAHFKP
Trigger: AGGCTTAAAGTGCGCTTGCAAACGTTTGCTCTCCTT...ACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGAATCACCTAGAGGGTaGACTAAAACAGACTTCTGG +
Preference number: 5 (lower is better)
Translates to: GNAATKGCWIYKIYLRLTESPRG*TKTDFW
Trigger: CCAGAAGTCTGTTTTAGTCAACCCTCTAGGTGATTC...TGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CTGTTTCCTGAATCCCATGCAGTAGATTTCACCTTCCTCCCCTCCTCCATTAATATCACAGAACCTTTCTaGCTTATTCTGAATAAGGCC +
Preference number: 5 (lower is better)
Translates to: LFPESHAVDFTFLPSSINITEPF*LILNKA
Trigger: GGCCTTATTCAGAATAAGCAAGAAAGGTTCTGTGAT...ATTAATGGAGGAGGGGAGGAAGGTGAAATCTACTGCATGGGATTCAGGAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATCCCAAGGCAAGTGATTaGGTTTCAAAGGGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDPKASD*VSKGSQ
Trigger: TTGGCTGCCCTTTGAAACCAAATCACTTGCCTTGGG...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATGTCAGAAATTGGTCATaGGCGGCAGTTTCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDVRNWS*AAVSRV
Trigger: GACTCTGGAAACTGCCGCCAATGACCAATTTCTGAC...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AAGTGTTGCAGATGCTGCTTGTCCGGGGAACACACTTTGAGAACTATTGTTCTATGCAGCAACCAAAGGTaGCTGGATTTACAAGATCTA +
Preference number: 5 (lower is better)
Translates to: KCCRCCLSGEHTLRTIVLCSNQR*LDLQDL
Trigger: TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCA...TAGAACAATAGTTCTCAAAGTGTGTTCCCCGGACAAGCAGCATCTGCAACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTTGCAGCAACCAAAGGTaGCTGGATTTACAAGATCTA +
Preference number: 5 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSCSNQR*LDLQDL
Trigger: TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCA...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTGCAGCAACCAAAGGTaGCTGGATTTACAAGATCTA +
Preference number: 5 (lower is better)
Translates to: IEPRGMQQPKVAGFTRSICSNQR*LDLQDL
Trigger: TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCA...GATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGATCTTTGAAATGGCAGTaGATTATGGCACTTAAAGAC +
Preference number: 5 (lower is better)
Translates to: EQHPQNRNRRPISVVTERSLKWQ*IMALKD
Trigger: GTCTTTAAGTGCCATAATCAACTGCCATTTCAAAGA...TCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp TATTTGGACAGCATTTGTTTATTTCCTTGCAGAACCGCCTCTATAGGGCTGGGATGCCTCAGGTCCTTTTaGAAAAGAGGCTTGTGTATA +
Preference number: 5 (lower is better)
Translates to: YLDSICLFPCRTASIGLGCLRSF*KRGLCI
Trigger: TATACACAAGCCTCTTTTCAAAAAGGACCTGAGGCA...TCCCAGCCCTATAGAGGCGGTTCTGCAAGGAAATAAACAAATGCTGTCCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACTTCATCAAGCCGGTTaGAACTCTCAAGCATGCGTG +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVILHQAG*NSQACV
Trigger: CACGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556414.7
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAGGATGGAAGGTAAGTTaGCCCTTTAATTCTGCCACC +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIGWKVS*PFNSAT
Trigger: GGTGGCAGAATTAAAGGGCAAACTTACCTTCCATCC...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269192.11
ENST00000556414.7
ENST00000591182.5
CDS-3UTR CAA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: QRLLDLQDLSTVNSQELIAQLRD*LNALVS
Trigger: GCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGC...TATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACTGTACTGTATCCCTTaGCCCTTCAGAAAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVILYCIP*PFRKAG
Trigger: TCCAGCTTTTCTGAAGGGCAAAGGGATACAGTACAG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269192.11
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATTGTTCCGGAGCATGTaGACATACAACCCGATGAGA +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVILFRSM*TYNPMR
Trigger: TCTCATCGGGTTGTATGTCAACATGCTCCGGAACAA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269192.11
CDS-3UTR CAA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGATTGTTCCGGAGCATGTaGACATACAACCCGATGAGA +
Preference number: 5 (lower is better)
Translates to: CGISLLREGSDQQLEKLRLFRSM*TYNPMR
Trigger: TCTCATCGGGTTGTATGTCAACATGCTCCGGAACAA...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000679678.1
CDS-3UTR CAA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTAGCATGCATGAGGGGTaGTTCCGGAGCATGTTGACA +
Preference number: 5 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFSMHEG*FRSMLT
Trigger: TGTCAACATGCTCCGGAACAACCCCTCATGCATGCT...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000679678.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAAGCAATCAGCTGCCTTaGCTGCTTATTCGCATCGAT +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVISNQLP*LLIRID
Trigger: ATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAAGCAATCAGCTGCCTTaGCTGCTTATTCGCATCGAT +
Preference number: 5 (lower is better)
Translates to: CGISLLREGSDQQLEKLRSNQLP*LLIRID
Trigger: ATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTTGTGCAAATGCCTCTaGTACATCTCCCCCTACTCC +
Preference number: 5 (lower is better)
Translates to: SFLKHTPMHYKSENKKLALCKCL*YISPYS
Trigger: GGAGTAGGGGGAGATGTACAAGAGGCATTTGCACAA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCCAACTTCTCCTTAAGTTTCTTCTaGAACTTTGTGCAAATGCCT +
Preference number: 5 (lower is better)
Translates to: FSQSPAQLPLTNQTYPNFSLSFF*NFVQMP
Trigger: AGGCATTTGCACAAAGTTCAAGAAGAAACTTAAGGA...GAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAAAGCCTTTTCAGAGGTaGGTGAGGGAACAAGATCCT +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIKPFQR*VREQDP
Trigger: AGGATCTTGTTCCCTCACCAACCTCTGAAAAGGCTT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGATGTGCAATTCATTGTGGAACAAGAAAGAAACAACCCCCGCAAGATGTAGTTCTGATAAGCTTCATCTaGCAGCTTCTGTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: GCAIHCGTRKKQPPQDVVLISFI*QLLFQV
Trigger: TACCTGAAACAGAAGCTGCAAGATGAAGCTTATCAG...AACTACATCTTGCGGGGGTTGTTTCTTTCTTGTTCCACAATGAATTGCACATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTATATTGCATTCAACCTaGCAAGCTGACCTGATAAGC +
Preference number: 5 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFILHST*QADLIS
Trigger: GCTTATCAGGTCAGCTTGCAAGGTTGAATGCAATAT...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACATATTGCATTCAACCTaGCAAGCTGACCTGATAAGC +
Preference number: 5 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNILHST*QADLIS
Trigger: GCTTATCAGGTCAGCTTGCAAGGTTGAATGCAATAT...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAATATTGCATTCAACCTaGCAAGCTGACCTGATAAGC +
Preference number: 5 (lower is better)
Translates to: GNAATKGCWIYKIYLRLTILHST*QADLIS
Trigger: GCTTATCAGGTCAGCTTGCAAGGTTGAATGCAATAT...TGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTATATTGCATTCAACCTaGCAAGCTGACCTGATAAGC +
Preference number: 5 (lower is better)
Translates to: PVLINRLSALMEMDVQFIILHST*QADLIS
Trigger: GCTTATCAGGTCAGCTTGCAAGGTTGAATGCAATAT...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACATGTGATAAAAGGATATaGCATTCAACCTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTCDKRI*HSTLQA
Trigger: AGCTTGCAAGGTTGAATGCAATATCCTTTTATCACA...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CATTTAGTGTACACAGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCTATTATTTAATAATGTaGGAAGTGCCGGGTCCGCTG +
Preference number: 5 (lower is better)
Translates to: HLVYTALLNSTLKTETVGYYLIM*EVPGPL
Trigger: CAGCGGACCCGGCACTTCCAACATTATTAAATAATA...GCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCTGTGTACACTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315456.10
CDS-3UTR CAA 90 bp GTGTATTGGAAATACAATAGCAATACCCCATGTATGCATTCATGGGCAATTATAGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: VYWKYNSNTPCMHSWAIIVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...TATAATTGCCCATGAATGCATACATGGGGTATTGCTATTGTATTTCCAATACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTGTGTTTGGGTCCAGGTaGTTCAGAGCATTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFVFGSR*FRAFSR
Trigger: GCGGGAAAATGCTCTGAACAACCTGGACCCAAACAC...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS-3UTR CAA 90 bp AGCTTTATTGAACAGCACCCTCAAAACAGAAACCGTAGGCCAATCTCTGTGGTGGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATT +
Preference number: 5 (lower is better)
Translates to: SFIEQHPQNRNRRPISVVVAKAI*TANTEI
Trigger: AATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCAC...CACCACAGAGATTGGCCTACGGTTTCTGTTTTGAGGGTGCTGTTCAATAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp TTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATT +
Preference number: 5 (lower is better)
Translates to: FWVNGYHAPWRNQNSSKYVAKAI*TANTEI
Trigger: AATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCAC...ATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp AACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTTACCCGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATT +
Preference number: 5 (lower is better)
Translates to: NPFFTISSTTPSDQPNLPVAKAI*TANTEI
Trigger: AATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCAC...GGGTAAGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GAAATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACAACTTCCCGAAGGAATaGGTCATATCGTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: EIIIFWVNGYHAPWRNQNNFPKE*VISSIN
Trigger: GTTTATGGACGATATGACCAATTCCTTCGGGAAGTT...GTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp GGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATAGGAATATTTAACTTCCCGAAGGAATaGGTCATATCGTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: GTMHPGGTRTAQSIIGIFNFPKE*VISSIN
Trigger: GTTTATGGACGATATGACCAATTCCTTCGGGAAGTT...AAATATTCCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp CCAGTGCTTATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTAACTTCCCGAAGGAATaGGTCATATCGTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: PVLINRLSALMEMDVQFINFPKE*VISSIN
Trigger: GTTTATGGACGATATGACCAATTCCTTCGGGAAGTT...AATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAATAAGCACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCAACTTCCCGAAGGAATaGGTCATATCGTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSNFPKE*VISSIN
Trigger: GTTTATGGACGATATGACCAATTCCTTCGGGAAGTT...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATGTAATTGTGACACTGTaGGCATCGGTAGCGAAATCC +
Preference number: 5 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDVIVTL*ASVAKS
Trigger: GGATTTCGCTACCGATGCCAACAGTGTCACAATTAC...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCTCC +
Preference number: 5 (lower is better)
Translates to: SFLKHTPMHYKSENKKLALHQAG*NSQACS
Trigger: GGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATGAAAACAACCTCGAGTaGGAAAGAGGCCCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDENNLE*ERGPKE
Trigger: TTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTC...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATATAACACACGCCATTTaGTCTCGCTTACAGGACAGG +
Preference number: 5 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDITHAI*SRLQDR
Trigger: CCTGTCCTGTAAGCGAGACAAAATGGCGTGTGTTAT...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GTGGAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATTGGATGTGCAATTCATaGTGGAACAAGAAAGAAACA +
Preference number: 5 (lower is better)
Translates to: VESNQGECSNQRLLDLQDWMCNS*WNKKET
Trigger: TGTTTCTTTCTTGTTCCACAATGAATTGCACATCCA...ATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TTAATATGGCGCTGTGGAGGAGGGTTGGCTGTGTTAGACCAGTGCTTATTAACATCTTTGAAATGGCAGTaGATTATGGCACTTAAAGAC +
Preference number: 5 (lower is better)
Translates to: LIWRCGGGLAVLDQCLLTSLKWQ*IMALKD
Trigger: GTCTTTAAGTGCCATAATCAACTGCCATTTCAAAGA...TGTTAATAAGCACTGGTCTAACACAGCCAACCCTCCTCCACAGCGCCATATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GAAATAATCATATTTTGGGTTAATGGGTACCATGCACCCTGGAGGAACCAGAACGTGTACACAGCTTTATaGAACAGCACCCTCAAAACA +
Preference number: 5 (lower is better)
Translates to: EIIIFWVNGYHAPWRNQNVYTAL*NSTLKT
Trigger: TGTTTTGAGGGTGCTGTTCAATAAAGCTGTGTACAC...GTTCTGGTTCCTCCAGGGTGCATGGTACCCATTAACCCAAAATATGATTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp GGTACCATGCACCCTGGAGGAACCAGAACAGCTCAAAGTATTATAGGAATATTTGTGTACACAGCTTTATaGAACAGCACCCTCAAAACA +
Preference number: 5 (lower is better)
Translates to: GTMHPGGTRTAQSIIGIFVYTAL*NSTLKT
Trigger: TGTTTTGAGGGTGCTGTTCAATAAAGCTGTGTACAC...AAATATTCCTATAATACTTTGAGCTGTTCTGGTTCCTCCAGGGTGCATGGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp TATTTGGACAGCATTTGTTTATTTCCTTGCAGAACCGCCTCTATAGGGCTGGGAGAAATGAAAGATACGTaGAAATTGGACAGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: YLDSICLFPCRTASIGLGEMKDT*KLDRLW
Trigger: CCACAACCTGTCCAATTTCAACGTATCTTTCATTTC...TCCCAGCCCTATAGAGGCGGTTCTGCAAGGAAATAAACAAATGCTGTCCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAACAGCCTTACAGGAATaGCACCTTTCTTCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVITALQE*HLSSLH
Trigger: GTGCAGAGAAGAAAGGTGCAATTCCTGTAAGGCTGT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601125.5
CDS CCA 90 bp GTTCCTCAGGTTTCATCTCTGCAAACAGCTGTCTTCTTTCTGCCATaGTATTTCCTCTTTTCCCACTATCTTCAATCATTCTGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: VPQVSSLQTAVFFLP*YFLFSHYLQSFWFC
Trigger: ACAAAACCAGAATGATTGAAGATAGTGGGAAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTGTTTGCAGAGATGAAACCTGAGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681274.1
CDS-3UTR CAA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTAAGATTTCTCTGTTCTaGTTTTCTAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTKISLF*FSSSAI
Trigger: GATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTAAGATTTCTCTGTTCTaGTTTTCTAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSKISLF*FSSSAI
Trigger: GATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAATTGTGCAAATGCCTCTaGTACATCTCCCCCTACTCC +
Preference number: 5 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKLCKCL*YISPYS
Trigger: GGAGTAGGGGGAGATGTACAAGAGGCATTTGCACAA...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AAGTGTTGCAGATGCTGCTTGTCCGGGGAACACACTTTGAGAACTATTGTTCTATCCTTAAGTTTCTTCTaGAACTTTGTGCAAATGCCT +
Preference number: 5 (lower is better)
Translates to: KCCRCCLSGEHTLRTIVLSLSFF*NFVQMP
Trigger: AGGCATTTGCACAAAGTTCAAGAAGAAACTTAAGGA...TAGAACAATAGTTCTCAAAGTGTGTTCCCCGGACAAGCAGCATCTGCAACACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTAAGCCTTTTCAGAGGTaGGTGAGGGAACAAGATCCT +
Preference number: 5 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAKPFQR*VREQDP
Trigger: AGGATCTTGTTCCCTCACCAACCTCTGAAAAGGCTT...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GTGCAAAAATCCCAACTCAACTTAGAAGAGCCTGTCTCCTTTCACATGACCACATGTGATAAAAGGATATaGCATTCAACCTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: VQKSQLNLEEPVSFHMTTCDKRI*HSTLQA
Trigger: AGCTTGCAAGGTTGAATGCAATATCCTTTTATCACA...TGTGGTCATGTGAAAGGAGACAGGCTCTTCTAAGTTGAGTTGGGATTTTTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACTGTCTGACTATAGCTaGCTTGAGAGGAGTGTGATA +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVILSDYS*LERSVI
Trigger: TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATT +
Preference number: 5 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSVAKAI*TANTEI
Trigger: AATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCAC...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp CAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATT +
Preference number: 5 (lower is better)
Translates to: QAISSDGDGCAIHCGTRKVAKAI*TANTEI
Trigger: AATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCAC...CTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAACTTCCCGAAGGAATaGGTCATATCGTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: DCGISLLREGSDQQLEKLNFPKE*VISSIN
Trigger: GTTTATGGACGATATGACCAATTCCTTCGGGAAGTT...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp ATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAAACTTCCCGAAGGAATaGGTCATATCGTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: INRLSALMEMDVQFIVEQNFPKE*VISSIN
Trigger: GTTTATGGACGATATGACCAATTCCTTCGGGAAGTT...TTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp ATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAAGACATTTTCCACATTaGCTAGTCGATGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: INRLSALMEMDVQFIVEQRHFPH*LVDAEE
Trigger: CTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCT...TTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
CDS-3UTR CAA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGACATTTTCCACATTaGCTAGTCGATGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: DCGISLLREGSDQQLEKLRHFPH*LVDAEE
Trigger: CTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCT...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp ACAGAAAGAAATGTGAGCTTTAAACAACACAACTGTGGTTCACAGAGAACATTCGTAATTGTGACACTGTaGGCATCGGTAGCGAAATCC +
Preference number: 5 (lower is better)
Translates to: TERNVSFKQHNCGSQRTFVIVTL*ASVAKS
Trigger: GGATTTCGCTACCGATGCCAACAGTGTCACAATTAC...GAATGTTCTCTGTGAACCACAGTTGTGTTGTTTAAAGCTCACATTTCTTTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp ATTGAGCACTTAATATTTGCAGAATACATGGCTAGATGCAGAGGATTCAAAGAACTTCATCAAGCCGGTTaGAACTCTCAAGCATGCTCC +
Preference number: 5 (lower is better)
Translates to: IEHLIFAEYMARCRGFKELHQAG*NSQACS
Trigger: GGAGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...TTCTTTGAATCCTCTGCATCTAGCCATGTATTCTGCAAATATTAAGTGCTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399121.9
CDS-3UTR CAA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTAATTCTTCAGGGTTATaGAATGATTGCAAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSNSSGL*NDCKWL
Trigger: CAACCACTTGCAATCATTCAATAACCCTGAAGAATT...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAGAAAACAACCTCGAGTaGGAAAGAGGCCCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: QRLLDLQDLSTVNSQELIENNLE*ERGPKE
Trigger: TTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTC...TATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATATAACTTTAGTCCGTTaGGGGATCTTATGGCACCTG +
Preference number: 5 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDITLVR*GILWHL
Trigger: CAGGTGCCATAAGATCCCCAAACGGACTAAAGTTAT...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAGTTCAGAGAAGGTTTTaGCCAGCCCCAGAAGCAAAA +
Preference number: 5 (lower is better)
Translates to: QRLLDLQDLSTVNSQELIVQRRF*PAPEAK
Trigger: TTTTGCTTCTGGGGCTGGCAAAAACCTTCTCTGAAC...TATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGTTCAGAGAAGGTTTTaGCCAGCCCCAGAAGCAAAA +
Preference number: 5 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAVQRRF*PAPEAK
Trigger: TTTTGCTTCTGGGGCTGGCAAAAACCTTCTCTGAAC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GAATCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATGGATGTGCAATTCATaGTGGAACAAGAAAGAAACA +
Preference number: 5 (lower is better)
Translates to: ESNQGECSNQRLLDLQDLWMCNS*WNKKET
Trigger: TGTTTCTTTCTTGTTCCACAATGAATTGCACATCCA...TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCGAACCAAGGGGAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTTGGATGTGCAATTCATaGTGGAACAAGAAAGAAACA +
Preference number: 5 (lower is better)
Translates to: SNQGECSNQRLLDLQDLSWMCNS*WNKKET
Trigger: TGTTTCTTTCTTGTTCCACAATGAATTGCACATCCA...AGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTCCCCTTGGTTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AAGTGTTGCAGATGCTGCTTGTCCGGGGAACACACTTTGAGAACTATTGTTCTATGGATGTGCAATTCATaGTGGAACAAGAAAGAAACA +
Preference number: 5 (lower is better)
Translates to: KCCRCCLSGEHTLRTIVLWMCNS*WNKKET
Trigger: TGTTTCTTTCTTGTTCCACAATGAATTGCACATCCA...TAGAACAATAGTTCTCAAAGTGTGTTCCCCGGACAAGCAGCATCTGCAACACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACTGCAGCAACCAAAGGTaGCTGGATTTACAAGATCTA +
Preference number: 5 (lower is better)
Translates to: LDLQDLSTVNSQELIRVDCSNQR*LDLQDL
Trigger: TAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCA...GTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAAAGCTAAGACTGGTTaGAAACTTATACCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: DCGISLLREGSDQQLEKLKAKTG*KLIPLG
Trigger: CCCCAGAGGTATAAGTTTCAAACCAGTCTTAGCTTT...TAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGAAAGCTAAGACTGGTTaGAAACTTATACCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKKAKTG*KLIPLG
Trigger: CCCCAGAGGTATAAGTTTCAAACCAGTCTTAGCTTT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGAAAATTGAGCACATTTaGGTGAGCCATGGGGAACAA +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKKIEHI*VSHGEQ
Trigger: TTGTTCCCCATGGCTCACCAAAATGTGCTCAATTTT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp TCAAGAACCCATTTTTCACAATCTCCAGCACAACTCCCTCTGACCAACCAAACTCACTTCATCCAAGGATaGGTAAATCCTATTTATCTG +
Preference number: 5 (lower is better)
Translates to: SRTHFSQSPAQLPLTNQTHFIQG*VNPIYL
Trigger: CAGATAAATAGGATTTACCAATCCTTGGATGAAGTG...AGTTTGGTTGGTCAGAGGGAGTTGTGCTGGAGATTGTGAAAAATGGGTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679372.1
CDS-3UTR CAA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGATGTTCATTCTTCCCCTaGTGCTCAACACACAGCAAT +
Preference number: 5 (lower is better)
Translates to: CGISLLREGSDQQLEKLRCSFFP*CSTHSN
Trigger: ATTGCTGTGTGTTGAGCACAAGGGGAAGAATGAACA...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680346.1
CDS TCA 90 bp AGGAATTGCACCTTTCTTCTCTGCACCACGATTTCAGATGATAGTTaGTTTGGGCTCAGAGAAACATTTAGTTCATTCCTGGAATCTTAC +
Preference number: 5 (lower is better)
Translates to: RNCTFLLCTTISDDS*FGLRETFSSFLESY
Trigger: GTAAGATTCCAGGAATGAACTAAATGTTTCTCTGAGCCCAAATCAACTATCATCTGAAATCGTGGTGCAGAGAAGAAAGGTGCAATTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590727.1
ENST00000601125.5
ENST00000681065.1
CDS TCA 90 bp CGTGTCATTCCTGCACAAATATGTGGCTTTTCAGGCATCTTGTTCTaGCCTCCATGTCTAGTCCAGAATCCTTTAATAGATATTCTCATA +
Preference number: 5 (lower is better)
Translates to: RVIPAQICGFSGILF*PPCLVQNPLIDILI
Trigger: TATGAGAATATCTATTAAAGGATTCTGGACTAGACATGGAGGTCAGAACAAGATGCCTGAAAAGCCACATATTTGTGCAGGAATGACACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684734.1
CDS CCA 90 bp CTAAGCACATCTTCATCTCTGCAAACAGCTGTCTTCTTTCTGCCATaGTATTTCCTCTTTTCCCACTATCTTCAATCATTCTGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: LSTSSSLQTAVFFLP*YFLFSHYLQSFWFC
Trigger: ACAAAACCAGAATGATTGAAGATAGTGGGAAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTGTTTGCAGAGATGAAGATGTGCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588949.6
CDS-3UTR CAA 90 bp GTGTATTGGAAATACAATAGCAATACCCCATGTATGCATTCATGGGCAATTATACTTCATCAAGCCGGTTaGAACTCTCAAGCATGCATG +
Preference number: 5 (lower is better)
Translates to: VYWKYNSNTPCMHSWAIILHQAG*NSQACM
Trigger: CATGCATGCTTGAGAGTTCAAACCGGCTTGATGAAG...TATAATTGCCCATGAATGCATACATGGGGTATTGCTATTGTATTTCCAATACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTAGCAATCAGCTGCCTTaGCTGCTTATTCGCATCGAT +
Preference number: 5 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFSNQLP*LLIRID
Trigger: ATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCT...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp AAAGAAAACAACCTCGAGTTGGAAAGAGGCCCCAAAGAATGGATTATTCCTGGTAAGATTTCTCTGTTCTaGTTTTCTAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: KENNLELERGPKEWIIPGKISLF*FSSSAI
Trigger: GATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT...ACCAGGAATAATCCATTCTTTGGGGCCTCTTTCCAACTCGAGGTTGTTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACTCCTTAAGTTTCTTCTaGAACTTTGTGCAAATGCCT +
Preference number: 5 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNSLSFF*NFVQMP
Trigger: AGGCATTTGCACAAAGTTCAAGAAGAAACTTAAGGA...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCTCCTTAAGTTTCTTCTaGAACTTTGTGCAAATGCCT +
Preference number: 5 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSSLSFF*NFVQMP
Trigger: AGGCATTTGCACAAAGTTCAAGAAGAAACTTAAGGA...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATACTGATAAGCTTCATCTaGCAGCTTCTGTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVILISFI*QLLFQV
Trigger: TACCTGAAACAGAAGCTGCAAGATGAAGCTTATCAG...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAATATTGCATTCAACCTaGCAAGCTGACCTGATAAGC +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIILHST*QADLIS
Trigger: GCTTATCAGGTCAGCTTGCAAGGTTGAATGCAATAT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CTGCCATTGTGTATAACAGCAGCATGGGTTTTCAGCCTGTGTTTGTTTGCTTTTTGTGATAAAAGGATATaGCATTCAACCTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: LPLCITAAWVFSLCLFAFCDKRI*HSTLQA
Trigger: AGCTTGCAAGGTTGAATGCAATATCCTTTTATCACA...AAAAGCAAACAAACACAGGCTGAAAACCCATGCTGCTGTTATACACAATGGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GAATGCAGCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCTGTGATAAAAGGATATaGCATTCAACCTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: ECSNQRLLDLQDLSTVNSCDKRI*HSTLQA
Trigger: AGCTTGCAAGGTTGAATGCAATATCCTTTTATCACA...GCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGCTGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTCTGTCTGACTATAGCTaGCTTGAGAGGAGTGTGATA +
Preference number: 5 (lower is better)
Translates to: SFLKHTPMHYKSENKKLALSDYS*LERSVI
Trigger: TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAG...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAAACTTCCCGAAGGAATaGGTCATATCGTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: CGISLLREGSDQQLEKLRNFPKE*VISSIN
Trigger: GTTTATGGACGATATGACCAATTCCTTCGGGAAGTT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCAACTTCCCGAAGGAATaGGTCATATCGTCCATAAAC +
Preference number: 5 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFNFPKE*VISSIN
Trigger: GTTTATGGACGATATGACCAATTCCTTCGGGAAGTT...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS-3UTR CAA 90 bp ACAAGAAAGAAACAACCCCCGCAAGATGTAGTTGTATCTAATGGACAGGACAAGAATTCTTCAGGGTTATaGAATGATTGCAAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: TRKKQPPQDVVVSNGQDKNSSGL*NDCKWL
Trigger: CAACCACTTGCAATCATTCAATAACCCTGAAGAATT...CTTGTCCTGTCCATTAGATACAACTACATCTTGCGGGGGTTGTTTCTTTCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GCAACCAAAGGTTGCTGGATTTACAAGATCTATCTACGGTTAACAGCCAAGAACAATTCTTCAGGGTTATaGAATGATTGCAAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: ATKGCWIYKIYLRLTAKNNSSGL*NDCKWL
Trigger: CAACCACTTGCAATCATTCAATAACCCTGAAGAATT...GTTCTTGGCTGTTAACCGTAGATAGATCTTGTAAATCCAGCAACCTTTGGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAGACATCAGTGCTAAATTATGATGCAACAGTTTGGCTCATGCATATAAGAAAAATAACACACGCCATTTaGTCTCGCTTACAGGACAGG +
Preference number: 5 (lower is better)
Translates to: QTSVLNYDATVWLMHIRKITHAI*SRLQDR
Trigger: CCTGTCCTGTAAGCGAGACAAAATGGCGTGTGTTAT...TTTTCTTATATGCATGAGCCAAACTGTTGCATCATAATTTAGCACTGATGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAAAAGCTAAGACTGGTTaGAAACTTATACCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: CGISLLREGSDQQLEKLRKAKTG*KLIPLG
Trigger: CCCCAGAGGTATAAGTTTCAAACCAGTCTTAGCTTT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAAAAATTGAGCACATTTaGGTGAGCCATGGGGAACAA +
Preference number: 5 (lower is better)
Translates to: CGISLLREGSDQQLEKLRKIEHI*VSHGEQ
Trigger: TTGTTCCCCATGGCTCACCAAAATGTGCTCAATTTT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS CCA 90 bp CAGATGATAGTTGATTTGGGCTCAGAGAAACATTTAGTTCATTCCTaGAATCTTACAACCCTTTTCAATCATGCCTGTGGGGAAATGAAA +
Preference number: 5 (lower is better)
Translates to: QMIVDLGSEKHLVHS*NLTTLFNHACGEMK
Trigger: TTTCATTTCCCCACAGGCATGATTGAAAAGGGTTGTAAGATTCCAGGAATGAACTAAATGTTTCTCTGAGCCCAAATCAACTATCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590727.1
ENST00000601125.5
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGAAGATTTCTCTGTTCTaGTTTTCTAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKKISLF*FSSSAI
Trigger: GATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp CTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAAACTCCTTAAGTTTCTTCTaGAACTTTGTGCAAATGCCT +
Preference number: 5 (lower is better)
Translates to: LSALMEMDVQFIVEQERNSLSFF*NFVQMP
Trigger: AGGCATTTGCACAAAGTTCAAGAAGAAACTTAAGGA...GTTTCTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTATATTGCATTCAACCTaGCAAGCTGACCTGATAAGC +
Preference number: 5 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAILHST*QADLIS
Trigger: GCTTATCAGGTCAGCTTGCAAGGTTGAATGCAATAT...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp ATTAACAGGCTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAATGTGATAAAAGGATATaGCATTCAACCTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: INRLSALMEMDVQFIVEQCDKRI*HSTLQA
Trigger: AGCTTGCAAGGTTGAATGCAATATCCTTTTATCACA...TTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAGCCTGTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AGTGACTGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATT +
Preference number: 5 (lower is better)
Translates to: SDCGISLLREGSDQQLEKVAKAI*TANTEI
Trigger: AATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCAC...CTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACAGTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp ACAGAAAGAAATGTGAGCTTTAAACAACACAACTGTGGTTCACAGAGAACATTCAGACATTTTCCACATTaGCTAGTCGATGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: TERNVSFKQHNCGSQRTFRHFPH*LVDAEE
Trigger: CTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCT...GAATGTTCTCTGTGAACCACAGTTGTGTTGTTTAAAGCTCACATTTCTTTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATCCGGGGAACACACTTaGAGAACTATTGTTCTAAAA +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVISGEHT*RTIVLK
Trigger: TTTTAGAACAATAGTTCTCAAAGTGTGTTCCCCGGA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp AACAGAAACCGTAGGCCAATCTCTGTGGTGACAGAAAGAAATGTGAGCTTTAAATCTTTGAAATGGCAGTaGATTATGGCACTTAAAGAC +
Preference number: 5 (lower is better)
Translates to: NRNRRPISVVTERNVSFKSLKWQ*IMALKD
Trigger: GTCTTTAAGTGCCATAATCAACTGCCATTTCAAAGA...TTTAAAGCTCACATTTCTTTCTGTCACCACAGAGATTGGCCTACGGTTTCTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315456.10
ENST00000554864.7
CDS-3UTR CAA 90 bp CTATCAGCTCTGATGGAGATGGATGTGCAATTCATTGTGGAACAAGAAAGAAACTCTTTGAAATGGCAGTaGATTATGGCACTTAAAGAC +
Preference number: 5 (lower is better)
Translates to: LSALMEMDVQFIVEQERNSLKWQ*IMALKD
Trigger: GTCTTTAAGTGCCATAATCAACTGCCATTTCAAAGA...GTTTCTTTCTTGTTCCACAATGAATTGCACATCCATCTCCATCAGAGCTGATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000681470.1
CDS-3UTR CAA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGCGTGGTACATGCACTaGAAATTAAAGCTGCTTTTA +
Preference number: 5 (lower is better)
Translates to: CGISLLREGSDQQLEKLRAWYMH*KLKLLL
Trigger: TAAAAGCAGCTTTAATTTCAAGTGCATGTACCACGC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
CDS CCA 90 bp CAGATGATAGTTGATTTGGGCTCAGAGAAACATTTAGTTCATTCCTaGAATCTTACAACCCTTTTCAATCATGCCATTTTCCACATTTGC +
Preference number: 5 (lower is better)
Translates to: QMIVDLGSEKHLVHS*NLTTLFNHAIFHIC
Trigger: GCAAATGTGGAAAATGGCATGATTGAAAAGGGTTGTAAGATTCCAGGAATGAACTAAATGTTTCTCTGAGCCCAAATCAACTATCATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681065.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATGTTCCAGAAGGTCCTaGCTATTCAGTTGTTATTTA +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVICSRRS*LFSCYL
Trigger: TAAATAACAACTGAATAGCAAGGACCTTCTGGAACA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269192.11
ENST00000556414.7
ENST00000591182.5
CDS-3UTR CAA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCAAGATTTCTCTGTTCTaGTTTTCTAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFKISLF*FSSSAI
Trigger: GATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATAAAGATTTCTCTGTTCTaGTTTTCTAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVIKISLF*FSSSAI
Trigger: GATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAAAGATTTCTCTGTTCTaGTTTTCTAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: CGISLLREGSDQQLEKLRKISLF*FSSSAI
Trigger: GATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000348997.9
ENST00000597674.5
ENST00000598774.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATAAGATTTCTCTGTTCTaGTTTTCTAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDKISLF*FSSSAI
Trigger: GATTGCTGAGCTAGAAAACAAGAACAGAGAAATCTT...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598334.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATCCTTAAGTTTCTTCTaGAACTTTGTGCAAATGCCT +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVISLSFF*NFVQMP
Trigger: AGGCATTTGCACAAAGTTCAAGAAGAAACTTAAGGA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCATGTTACTTTCATCATCTGTCTGACTATAGCTTGCTTGAGAGGAGTGTGATATGTGATAAAAGGATATaGCATTCAACCTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: SCYFHHLSDYSLLERSVICDKRI*HSTLQA
Trigger: AGCTTGCAAGGTTGAATGCAATATCCTTTTATCACA...TATCACACTCCTCTCAAGCAAGCTATAGTCAGACAGATGATGAAAGTAACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269192.11
ENST00000399121.9
ENST00000556414.7
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp CAAGATCTATCTACGGTTAACAGCCAAGAACTAATAAGGGTGGACAAAGATGATTGTGATAAAAGGATATaGCATTCAACCTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: QDLSTVNSQELIRVDKDDCDKRI*HSTLQA
Trigger: AGCTTGCAAGGTTGAATGCAATATCCTTTTATCACA...ATCATCTTTGTCCACCCTTATTAGTTCTTGGCTGTTAACCGTAGATAGATCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000679372.1
ENST00000679796.1
ENST00000680822.1
ENST00000681241.1
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TGTGGTATCTCTCTGTTAAGAGAAGGGTCTGATCAACAACTTGAAAAGCTAAGAGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATT +
Preference number: 5 (lower is better)
Translates to: CGISLLREGSDQQLEKLRVAKAI*TANTEI
Trigger: AATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCAC...TCTTAGCTTTTCAAGTTGTTGATCAGACCCTTCTCTTAACAGAGAGATACCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348997.9
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
CDS-3UTR CAA 90 bp TTACAGACCATGGGAATGAAGGGTAAAAATGTGTCCAGCATTTTCCAAACATTCGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATT +
Preference number: 5 (lower is better)
Translates to: LQTMGMKGKNVSSIFQTFVAKAI*TANTEI
Trigger: AATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCAC...GAATGTTTGGAAAATGCTGGACACATTTTTACCCTTCATTCCCATGGTCTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS-3UTR CAA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTCTTTGATAGCTCTTTaGCACTTCAGCTTTTCACTG +
Preference number: 5 (lower is better)
Translates to: SFLKHTPMHYKSENKKLASLIAL*HFSFSL
Trigger: CAGTGAAAAGCTGAAGTGCAAAAGAGCTATCAAAGA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTAAAATTGAGCACATTTaGGTGAGCCATGGGGAACAA +
Preference number: 5 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFKIEHI*VSHGEQ
Trigger: TTGTTCCCCATGGCTCACCAAAATGTGCTCAATTTT...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348997.9
ENST00000679678.1
ENST00000681274.1
CDS-3UTR CAA 90 bp GTGTATTGGAAATACAATAGCAATACCCCATGTATGCATTCATGGGCAATTATAGAGGAAAGAAGCCATTaGCAGAGAAGTATCATGAAG +
Preference number: 5 (lower is better)
Translates to: VYWKYNSNTPCMHSWAIIEERSH*QRSIMK
Trigger: CTTCATGATACTTCTCTGCAAATGGCTTCTTTCCTC...TATAATTGCCCATGAATGCATACATGGGGTATTGCTATTGTATTTCCAATACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348997.9
CDS-3UTR CAA 90 bp CTTAATGCATTAGTCAGCTTCTTAGCAGGTGATTTAGGAATTGCACCTTTCTTCCAGATGATAGTTGATTaGGGCTCAGAGAAACATTTA +
Preference number: 5 (lower is better)
Translates to: LNALVSFLAGDLGIAPFFQMIVD*GSEKHL
Trigger: TAAATGTTTCTCTGAGCCCAAATCAACTATCATCTG...GAAGAAAGGTGCAATTCCTAAATCACCTGCTAAGAAGCTGACTAATGCATTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681065.1
CDS TCA 90 bp TTGAACCAAATTGGTAATTACAACAGAGATCATAACAGAACTCTCTaGAATTCTAGGGAGAGCTATGAGTATGAAATCCAGCCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: LNQIGNYNRDHNRTL*NSRESYEYEIQPLD
Trigger: ATCTAGAGGCTGGATTTCATACTCATAGCTCTCCCTAGAATTTCAGAGAGTTCTGTTATGATCTCTGTTGTAATTACCAATTTGGTTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588125.5
ENST00000591816.6
ENST00000598334.5
ENST00000683705.1
ENST00000684610.1
CDS-3UTR CAA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTCCTTAAGTTTCTTCTaGAACTTTGTGCAAATGCCT +
Preference number: 5 (lower is better)
Translates to: SFLKHTPMHYKSENKKLASLSFF*NFVQMP
Trigger: AGGCATTTGCACAAAGTTCAAGAAGAAACTTAAGGA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTTGTGATAAAAGGATATaGCATTCAACCTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: SFLKHTPMHYKSENKKLACDKRI*HSTLQA
Trigger: AGCTTGCAAGGTTGAATGCAATATCCTTTTATCACA...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399121.9
ENST00000591182.5
ENST00000595022.5
ENST00000598142.5
ENST00000601125.5
ENST00000681470.1
ENST00000681759.1
CDS-3UTR CAA 90 bp TCCTTCTTGAAACACACACCTATGCACTACAAATCTGAGAACAAAAAGTTAGCTGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATT +
Preference number: 5 (lower is better)
Translates to: SFLKHTPMHYKSENKKLAVAKAI*TANTEI
Trigger: AATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCAC...AGCTAACTTTTTGTTCTCAGATTTGTAGTGCATAGGTGTGTGTTTCAAGAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399121.9
ENST00000595022.5
ENST00000598142.5
ENST00000681470.1
CDS-3UTR CAA 90 bp GGATATATTGTCATACATAGCGTGGTACATGCACTTGAAATTAAAGCTGCTTTTGTGGCTAAAGCCATTTaGACAGCAAATACTGAAATT +
Preference number: 5 (lower is better)
Translates to: GYIVIHSVVHALEIKAAFVAKAI*TANTEI
Trigger: AATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCAC...AAAAGCAGCTTTAATTTCAAGTGCATGTACCACGCTATGTATGACAATATATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348997.9
ENST00000681274.1
CDS CCA 72 bp GAAGTGCCGGGTCCGCTGCCAGAGTTGTGGGTCATGTaGGCACAGCAGAGGCTGGCTGCTGCCAGTACCAGG +
Preference number: 6 (lower is better)
Translates to: EVPGPLPELWVM*AQQRLAAASTR
Trigger: CCTGGTACTGGCAGCAGCCAGCCTCTGCTGTGCCCACATGACCCACAACTCTGGCAGCGGACCCGGCACTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283365.14
ENST00000315456.10
ENST00000596745.5
ENST00000682923.1
CDS GCA 72 bp GCTGAAGGAGTCCCAGGTGACTGGAGCTTCCCCGCTTaGCAGCATGTCAGCATGGTCCTTCCTCCCACCATG +
Preference number: 6 (lower is better)
Translates to: AEGVPGDWSFPA*QHVSMVLPPTM
Trigger: CATGGTGGGAGGAAGGACCATGCTGACATGCTGGCAAGCGGGGAAGCTCCAGTCACCTGGGACTCCTTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585446.1
ENST00000681241.1
CDS CCA 72 bp ATAATGTTGGAAGTGCCGGGTCCGCTGCCAGAGTTGTaGGTCATGTGGGCACAGCAGAGGCTGGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: IMLEVPGPLPEL*VMWAQQRLAAA
Trigger: GGCAGCAGCCAGCCTCTGCTGTGCCCACATGACCCACAACTCTGGCAGCGGACCCGGCACTTCCAACATTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283365.14
ENST00000315456.10
ENST00000596745.5
ENST00000598774.6
ENST00000682923.1
ENST00000684266.1
CDS CCA 72 bp TGCCAGAGTTGTGGGTCATGTGGGCACAGCAGAGGCTaGCTGCTGCCAGTACCAGGGTTTCCTGAGGATCCT +
Preference number: 6 (lower is better)
Translates to: CQSCGSCGHSRG*LLPVPGFPEDP
Trigger: AGGATCCTCAGGAAACCCTGGTACTGGCAGCAGCCAGCCTCTGCTGTGCCCACATGACCCACAACTCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596745.5
ENST00000682923.1
CDS CCA 72 bp GGTCCTTCCTCCCACCATGGTACATTAATCAGCCAGTaGGTGCCCCCGTCCTCCAGGGATGGCTACTTCATC +
Preference number: 6 (lower is better)
Translates to: GPSSHHGTLISQ*VPPSSRDGYFI
Trigger: GATGAAGTAGCCATCCCTGGAGGACGGGGGCACCCACTGGCTGATTAATGTACCATGGTGGGAGGAAGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585446.1
CDS CCA 72 bp CTTGCCAGCATGTCAGCATGGTCCTTCCTCCCACCATaGTACATTAATCAGCCAGTGGGTGCCCCCGTCCTC +
Preference number: 6 (lower is better)
Translates to: LASMSAWSFLPP*YINQPVGAPVL
Trigger: GAGGACGGGGGCACCCACTGGCTGATTAATGTACCATGGTGGGAGGAAGGACCATGCTGACATGCTGGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585446.1
ENST00000681241.1
CDS CCA 72 bp AGAATAGCTCTGGCTGGCATCTGGCAGGTGCCCTTCTaGGACGAAGCTTCCAGAGGAAGGAGCAGGCAGCAA +
Preference number: 6 (lower is better)
Translates to: RIALAGIWQVPF*DEASRGRSRQQ
Trigger: TTGCTGCCTGCTCCTTCCTCTGGAAGCTTCGTCCCAGAAGGGCACCTGCCAGATGCCAGCCAGAGCTATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682483.1
CDS GCA 72 bp GTTGTGGGTCATGTGGGCACAGCAGAGGCTGGCTGCTaGCAGTACCAGGGTTTCCTGAGGATCCTGAAACTA +
Preference number: 6 (lower is better)
Translates to: VVGHVGTAEAGC*QYQGFLRILKL
Trigger: TAGTTTCAGGATCCTCAGGAAACCCTGGTACTGGCAGCAGCCAGCCTCTGCTGTGCCCACATGACCCACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682923.1
CDS TCA 72 bp GAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTaGAACCCCATCTCTTGGAATGGACGGGCGCTTCAG +
Preference number: 6 (lower is better)
Translates to: EVRRSRPSWLTQ*NPISWNGRALQ
Trigger: CTGAAGCGCCCGTCCATTCCAAGAGATGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588771.1
ENST00000683092.1
CDS TCA 72 bp ATCCTATTTATCTTCAAGTCCCAGGAGTGGTACCACTaGGTCCCAGCCTCGCCGTCGCCACCCCTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: ILFIFKSQEWYH*VPASPSPPLFS
Trigger: AGAGAAGAGGGGTGGCGACGGCGAGGCTGGGACTCAGTGGTACCACTCCTGGGACTTGAAGATAAATAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681470.1
CDS CCA 72 bp GTGACTGGAGCTTCCCCGCTTGCCAGCATGTCAGCATaGTCCTTCCTCCCACCATGGTACATTAATCAGCCA +
Preference number: 6 (lower is better)
Translates to: VTGASPLASMSA*SFLPPWYINQP
Trigger: TGGCTGATTAATGTACCATGGTGGGAGGAAGGACCATGCTGACATGCTGGCAAGCGGGGAAGCTCCAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585446.1
ENST00000681241.1
CDS CAA 72 bp CTGAGATGTCACCTTGCAGCAGACCGATGGATTCTCTaGGAATGGACGGGCGCTTCAGTCACTGACTCGCCA +
Preference number: 6 (lower is better)
Translates to: LRCHLAADRWIL*EWTGASVTDSP
Trigger: TGGCGAGTCAGTGACTGAAGCGCCCGTCCATTCCAAGAGAATCCATCGGTCTGCTGCAAGGTGACATCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588506.1
CDS GCA 72 bp GCAGGTCGGCAGGCCCCTCCACTGTTAGTTAAGACCTaGAGTAGGGGACATAACTTACTCCCTGCTTCAGTT +
Preference number: 6 (lower is better)
Translates to: AGRQAPPLLVKT*SRGHNLLPASV
Trigger: AACTGAAGCAGGGAGTAAGTTATGTCCCCTACTGCAGGTCTTAACTAACAGTGGAGGGGCCTGCCGACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000348997.9
ENST00000596745.5
ENST00000597599.5
ENST00000597674.5
ENST00000598774.6
ENST00000601632.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
ENST00000682483.1
ENST00000682581.1
ENST00000682923.1
ENST00000683370.1
ENST00000683876.1
ENST00000684228.1
CDS CCA 72 bp GGGAGGCCAAGTATCAACGATGTGAGCCAAGTTGAGTaGCTTCTCAGGCTGATCTGGGAACATGGGGTGCAA +
Preference number: 6 (lower is better)
Translates to: GRPSINDVSQVE*LLRLIWEHGVQ
Trigger: TTGCACCCCATGTTCCCAGATCAGCCTGAGAAGCCACTCAACTTGGCTCACATCGTTGATACTTGGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315456.10
ENST00000399113.7
ENST00000598142.5
ENST00000598774.6
ENST00000679936.1
ENST00000680346.1
ENST00000680366.1
ENST00000682581.1
ENST00000682923.1
ENST00000683379.1
ENST00000684359.1
CDS CCA 72 bp TGTCACCTTGCAGCAGACCGATGGATTCTCTTGGAATaGACGGGCGCTTCAGTCACTGACTCGCCAAACTCT +
Preference number: 6 (lower is better)
Translates to: CHLAADRWILLE*TGASVTDSPNS
Trigger: AGAGTTTGGCGAGTCAGTGACTGAAGCGCCCGTCCATTCCAAGAGAATCCATCGGTCTGCTGCAAGGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588506.1
CDS CCA 72 bp CCTAGACAGCTGAGATGTCACCTTGCAGCAGACCGATaGATTCTCTTGGAATGGACGGGCGCTTCAGTCACT +
Preference number: 6 (lower is better)
Translates to: PRQLRCHLAADR*ILLEWTGASVT
Trigger: AGTGACTGAAGCGCCCGTCCATTCCAAGAGAATCCATCGGTCTGCTGCAAGGTGACATCTCAGCTGTCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588506.1
CDS CCA 72 bp GCAGCCTTCACTGGTGATACCCAGGAAAACAGGGTCTaGAGTGGACCTCCAGCAAACTCCAGCAGACCTAAA +
Preference number: 6 (lower is better)
Translates to: AAFTGDTQENRV*SGPPANSSRPK
Trigger: TTTAGGTCTGCTGGAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTTCCTGGGTATCACCAGTGAAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682483.1
CDS CAA 72 bp GTCCACCAGGTGCACTGTGCTCAAGGAGCACTGGACTaGGAGTCCAAAGACCTAGGTTGCAAATCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: VHQVHCAQGALD*ESKDLGCKSGS
Trigger: AGAGCCAGATTTGCAACCTAGGTCTTTGGACTCCAAGTCCAGTGCTCCTTGAGCACAGTGCACCTGGTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682581.1
CDS TCA 72 bp ACCCCATCTCTTGGAATGGACGGGCGCTTCAGTCACTaGCTCGCCAAACTCTTAGAAGGTGTCCATTGGTCT +
Preference number: 6 (lower is better)
Translates to: TPSLGMDGRFSH*LAKLLEGVHWS
Trigger: AGACCAATGGACACCTTCTAAGAGTTTGGCGAGTCAGTGACTGAAGCGCCCGTCCATTCCAAGAGATGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588771.1
ENST00000683092.1
CDS CCA 72 bp CAGGCTGTACTGTATCCCTTTGCCCTTCAGAAAAGCTaGAGCAGCCCTAGCCAGCAGTTTGTTCTGCTCTAC +
Preference number: 6 (lower is better)
Translates to: QAVLYPFALQKS*SSPSQQFVLLY
Trigger: GTAGAGCAGAACAAACTGCTGGCTAGGGCTGCTCCAGCTTTTCTGAAGGGCAAAGGGATACAGTACAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269192.11
ENST00000348997.9
ENST00000399113.7
ENST00000444659.6
ENST00000679678.1
ENST00000679796.1
ENST00000682129.1
CDS CAA 90 bp GGGTGCAGCAAAGCACCATGGTACCTGTATGCCTGTGTAGCAAACTaGCACGTTCTGCATATGTATCCCAGAACCTGTGTCTCCCAGCTT +
Preference number: 6 (lower is better)
Translates to: GCSKAPWYLYACVAN*HVLHMYPRTCVSQL
Trigger: AAGCTGGGAGACACAGGTTCTGGGATACATATGCAGAACGTGCAAGTTTGCTACACAGGCATACAGGTACCATGGTGCTTTGCTGCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684560.1
CDS GCA 72 bp CGCAATGCTTCTATGACATTCCATATGTCCACCAGGTaGACTGTGCTCAAGGAGCACTGGACTTGGAGTCCA +
Preference number: 6 (lower is better)
Translates to: RNASMTFHMSTR*TVLKEHWTWSP
Trigger: TGGACTCCAAGTCCAGTGCTCCTTGAGCACAGTGCACCTGGTGGACATATGGAATGTCATAGAAGCATTGCG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682581.1
CDS CCA 72 bp TCTTCTTCCTTTAGTAGCTTCATGAGACCCTCCAACTaGACCATTAGCTCTCTCCGGCTCTCCTGGAGAGCA +
Preference number: 6 (lower is better)
Translates to: SSSFSSFMRPSN*TISSLRLSWRA
Trigger: TGCTCTCCAGGAGAGCCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCATGAAGCTACTAAAGGAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000348997.9
ENST00000399121.9
ENST00000596745.5
ENST00000597599.5
ENST00000597674.5
ENST00000598774.6
ENST00000599844.5
ENST00000601632.6
ENST00000679678.1
ENST00000679936.1
ENST00000680346.1
ENST00000681274.1
ENST00000682483.1
ENST00000682581.1
ENST00000682923.1
ENST00000683370.1
ENST00000683876.1
ENST00000684228.1
CDS CAA 90 bp GCACTGTGCTCAAGGAGCACTGGACTTGGAGTCCAAAGACCTAGGTaGCAAATCTGGCTCTTCTACGACAAGTGCATGACCTCTAAGACT +
Preference number: 6 (lower is better)
Translates to: ALCSRSTGLGVQRPR*QIWLFYDKCMTSKT
Trigger: AGTCTTAGAGGTCATGCACTTGTCGTAGAAGAGCCAGATTTGCAACCTAGGTCTTTGGACTCCAAGTCCAGTGCTCCTTGAGCACAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682581.1
CDS TCA 72 bp ATGGATTCTCTTGGAATGGACGGGCGCTTCAGTCACTaGCTCGCCAAACTCTTAGAAGGTGTCCATTGGTCT +
Preference number: 6 (lower is better)
Translates to: MDSLGMDGRFSH*LAKLLEGVHWS
Trigger: AGACCAATGGACACCTTCTAAGAGTTTGGCGAGTCAGTGACTGAAGCGCCCGTCCATTCCAAGAGAATCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588506.1
CDS TCA 72 bp TTAGCAACACTTGGAATGGACGGGCGCTTCAGTCACTaGCTCGCCAAACTCTTAGAAGGTGTCCATTGGTCT +
Preference number: 6 (lower is better)
Translates to: LATLGMDGRFSH*LAKLLEGVHWS
Trigger: AGACCAATGGACACCTTCTAAGAGTTTGGCGAGTCAGTGACTGAAGCGCCCGTCCATTCCAAGTGTTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682406.1
CDS CCA 72 bp AGGTCACAATTCCAGGTGAAGACACAGTACCACACATaGGGTCTAGGAAATTGGAAGGCCTGGCTGAAACTC +
Preference number: 6 (lower is better)
Translates to: RSQFQVKTQYHT*GLGNWKAWLKL
Trigger: GAGTTTCAGCCAGGCCTTCCAATTTCCTAGACCCCATGTGTGGTACTGTGTCTTCACCTGGAATTGTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588949.6
ENST00000679372.1
ENST00000682406.1
CDS CCA 72 bp CTATCTTCAATCATTCTCATACAGAATAGCTCTGGCTaGCATCTGGCAGGTGCCCTTCTGGGACGAAGCTTC +
Preference number: 6 (lower is better)
Translates to: LSSIILIQNSSG*HLAGALLGRSF
Trigger: GAAGCTTCGTCCCAGAAGGGCACCTGCCAGATGCCAGCCAGAGCTATTCTGTATGAGAATGATTGAAGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682483.1
CDS CAA 72 bp ACCTGGCAATTAGCCTGTGTTCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCATGAGGGGTTGTTCCGGA +
Preference number: 6 (lower is better)
Translates to: TWQLACVLHQAG*NSQACMRGCSG
Trigger: TCCGGAACAACCCCTCATGCATGCTTGAGAGTTCAAACCGGCTTGATGAAGAACACAGGCTAATTGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269192.11
ENST00000348997.9
ENST00000399113.7
ENST00000444659.6
ENST00000679678.1
ENST00000679796.1
ENST00000682129.1
CDS CAA 72 bp GGTCTCAGTGCTGACGTGGAGCTGATAAGCTTCATCTaGCAGCTTCTGTTTCAGGTATTCCTCCATCTGGAG +
Preference number: 6 (lower is better)
Translates to: GLSADVELISFI*QLLFQVFLHLE
Trigger: CTCCAGATGGAGGAATACCTGAAACAGAAGCTGCAAGATGAAGCTTATCAGCTCCACGTCAGCACTGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592449.1
ENST00000598334.5
CDS CAA 72 bp GGTGAAGACACAGTACCACACATGGGGTCTAGGAAATaGGAAGGCCTGGCTGAAACTCTCCCAAACACTCTA +
Preference number: 6 (lower is better)
Translates to: GEDTVPHMGSRK*EGLAETLPNTL
Trigger: TAGAGTGTTTGGGAGAGTTTCAGCCAGGCCTTCCAATTTCCTAGACCCCATGTGTGGTACTGTGTCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588949.6
ENST00000679372.1
ENST00000682406.1
CDS CAA 90 bp CGGTTTGAACTCTCAAGCATGCATGAGGGGTTGTTCCGGAGCATGTaGACATACAACCCGATGAGAACATGTTCATCAGCTAGCCTGTCT +
Preference number: 6 (lower is better)
Translates to: RFELSSMHEGLFRSM*TYNPMRTCSSASLS
Trigger: AGACAGGCTAGCTGATGAACATGTTCTCATCGGGTTGTATGTCAACATGCTCCGGAACAACCCCTCATGCATGCTTGAGAGTTCAAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269192.11
ENST00000348997.9
ENST00000399113.7
ENST00000444659.6
ENST00000679678.1
ENST00000679796.1
ENST00000682129.1
CDS TCA 72 bp TCAATCATTCTTGGAATGGACGGGCGCTTCAGTCACTaGCTCGCCAAACTCTTAGAAGGTGTCCATTGGTCT +
Preference number: 6 (lower is better)
Translates to: SIILGMDGRFSH*LAKLLEGVHWS
Trigger: AGACCAATGGACACCTTCTAAGAGTTTGGCGAGTCAGTGACTGAAGCGCCCGTCCATTCCAAGAATGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283365.14
CDS TCA 72 bp CCTATTTATCTTGGAATGGACGGGCGCTTCAGTCACTaGCTCGCCAAACTCTTAGAAGGTGTCCATTGGTCT +
Preference number: 6 (lower is better)
Translates to: PIYLGMDGRFSH*LAKLLEGVHWS
Trigger: AGACCAATGGACACCTTCTAAGAGTTTGGCGAGTCAGTGACTGAAGCGCCCGTCCATTCCAAGATAAATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315456.10
ENST00000596745.5
ENST00000598774.6
ENST00000679936.1
ENST00000682483.1
ENST00000682923.1
ENST00000683379.1
ENST00000684266.1
ENST00000684359.1
CDS TCA 72 bp ATTCAGGGAACATCAGGAGTTGTACTTTGTCTAAGATaGTTCTGGTCTGATATCGCCCCCAGGTGCCTGGCA +
Preference number: 6 (lower is better)
Translates to: IQGTSGVVLCLR*FWSDIAPRCLA
Trigger: TGCCAGGCACCTGGGGGCGATATCAGACCAGAATCATCTTAGACAAAGTACAACTCCTGATGTTCCCTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000683705.1
ENST00000684610.1
CDS CCA 72 bp CGTTGCAGTGCATCACGTTCTAATTCTTTGGAGGAGTaGGAAGCAGCAAAGCTCTTAGAGCCAGGCTATTCA +
Preference number: 6 (lower is better)
Translates to: RCSASRSNSLEE*EAAKLLEPGYS
Trigger: TGAATAGCCTGGCTCTAAGAGCTTTGCTGCTTCCCACTCCTCCAAAGAATTAGAACGTGATGCACTGCAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587723.1
CDS CAA 72 bp CTCTCAAGCATGCATGAGGGGTTGTTCCGGAGCATGTaGACATACAACCCGATGAGAACATGTTCATCAGCT +
Preference number: 6 (lower is better)
Translates to: LSSMHEGLFRSM*TYNPMRTCSSA
Trigger: AGCTGATGAACATGTTCTCATCGGGTTGTATGTCAACATGCTCCGGAACAACCCCTCATGCATGCTTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269192.11
ENST00000348997.9
ENST00000399113.7
ENST00000444659.6
ENST00000679678.1
ENST00000679796.1
ENST00000682129.1
CDS CAA 90 bp ACAATTCCAGGTGAAGACACAGTACCACACATGGGGTCTAGGAAATaGGAAGGCCTGGCTGAAACTCTCCCAAACACTCTAAGCACATCT +
Preference number: 6 (lower is better)
Translates to: TIPGEDTVPHMGSRK*EGLAETLPNTLSTS
Trigger: AGATGTGCTTAGAGTGTTTGGGAGAGTTTCAGCCAGGCCTTCCAATTTCCTAGACCCCATGTGTGGTACTGTGTCTTCACCTGGAATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588949.6
ENST00000679372.1
ENST00000682406.1
CDS CAA 90 bp AACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGCTTCTTAGCAGGTGATTTGGAAGAA +
Preference number: 6 (lower is better)
Translates to: NMGCKGSRLEAQLRD*LNALVSFLAGDLEE
Trigger: TTCTTCCAAATCACCTGCTAAGAAGCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683876.1
CDS CAA 90 bp AACATGGGGTGCAAAGGTTCACGGCTGGAAGCACAGCTCAGGGACTaGCTTAATGCATTAGTCAGCTTCTTAGCAGGTGATTTTGTGAAT +
Preference number: 6 (lower is better)
Translates to: NMGCKGSRLEAQLRD*LNALVSFLAGDFVN
Trigger: ATTCACAAAATCACCTGCTAAGAAGCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000269192.11
ENST00000556414.7
ENST00000591182.5
ENST00000597674.5
ENST00000599844.5
ENST00000601632.6
ENST00000679678.1
ENST00000679731.1
ENST00000682129.1
ENST00000684228.1
CDS CAA 72 bp ACCTGGCAATTAGCCTGTGTTCTTCATCAAGCCGGTTaGAACTCTCAAGCATGCCTTTGCCCTTCAGAAAAG +
Preference number: 6 (lower is better)
Translates to: TWQLACVLHQAG*NSQACLCPSEK
Trigger: CTTTTCTGAAGGGCAAAGGCATGCTTGAGAGTTCAAACCGGCTTGATGAAGAACACAGGCTAATTGCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591182.5
ENST00000601632.6
CDS CAA 72 bp AAAGCACCATGGTACCTGTATGCCTGTGTAGCAAACTaGCACGTTCTGCATATGTATCCCAGAACCTGTGTC +
Preference number: 6 (lower is better)
Translates to: KAPWYLYACVAN*HVLHMYPRTCV
Trigger: GACACAGGTTCTGGGATACATATGCAGAACGTGCAAGTTTGCTACACAGGCATACAGGTACCATGGTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684560.1
CDS TCA 72 bp AGGTCTGTCCTATTCAAGGACAAGTTCCTCAGGTTCTaGATGCTAAATCTGCCTTTGCTCCCAGATGAGGAT +
Preference number: 6 (lower is better)
Translates to: RSVLFKDKFLRF*MLNLPLLPDED
Trigger: ATCCTCATCTGGGAGCAAAGGCAGATTTAGCATTCAGAACCTGAGGAACTTGTCCTTGAATAGGACAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684377.1
CDS GCA 72 bp TCAATTGCATTTCTTCTGAACAAACCTAAGCTTGCATaGTGTTCTGTAGGTGGAGAGTCGGATGCGATCCAG +
Preference number: 6 (lower is better)
Translates to: SIAFLLNKPKLA*CSVGGESDAIQ
Trigger: CTGGATCGCATCCGACTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTTGTTCAGAAGAAATGCAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682581.1
CDS CAA 72 bp CCCACTATCTTCAATCATTCTAATGTAGATGACGGGTaGATGGGTGCAGCAAAGCACCATGGTACCTGTATG +
Preference number: 6 (lower is better)
Translates to: PTIFNHSNVDDG*MGAAKHHGTCM
Trigger: CATACAGGTACCATGGTGCTTTGCTGCACCCATCAACCCGTCATCTACATTAGAATGATTGAAGATAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684560.1
CDS CAA 90 bp ATTTGGAAGAAATCCTTTTTCAGTGCTGATTCTGAGTCTGGAAGTTaGCTCAATGCTCGGAAAAGAGTTTCCGAACAAGCTGCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: IWKKSFFSADSESGS*LNARKRVSEQAASC
Trigger: GCAGGAGGCAGCTTGTTCGGAAACTCTTTTCCGAGCATTGAGCAAACTTCCAGACTCAGAATCAGCACTGAAAAAGGATTTCTTCCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683876.1
CDS TCA 72 bp CTAGGTTGCAAATCTGGCTCTTCTACGACAAGTGCATaGCCTCTAAGACTTAGAGTCTCACTTCCTTCATCT +
Preference number: 6 (lower is better)
Translates to: LGCKSGSSTTSA*PLRLRVSLPSS
Trigger: AGATGAAGGAAGTGAGACTCTAAGTCTTAGAGGTCATGCACTTGTCGTAGAAGAGCCAGATTTGCAACCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682581.1
CDS CAA 72 bp AATCTGCCTTTGCTCCCAGATGAGGATGTACTTTTATaGGTGCTAAGTTTGGCTCAGCAATCAGGAGAGTCT +
Preference number: 6 (lower is better)
Translates to: NLPLLPDEDVLL*VLSLAQQSGES
Trigger: AGACTCTCCTGATTGCTGAGCCAAACTTAGCACCAATAAAAGTACATCCTCATCTGGGAGCAAAGGCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684377.1
CDS GCA 72 bp AATCCTTTTTCAGTGCTGATTCTGAGTCTGGAAGTTTaGTCAATGCTCGGAAAAGAGTTTCCGAACAAGCTG +
Preference number: 6 (lower is better)
Translates to: NPFSVLILSLEV*SMLGKEFPNKL
Trigger: CAGCTTGTTCGGAAACTCTTTTCCGAGCATTGAGCAAACTTCCAGACTCAGAATCAGCACTGAAAAAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683876.1
CDS CCA 72 bp GTTGATTTGGGCTCAGAGAAACATTTAGTTCATTCCTaGAATCTTACAACCCTTTTCAATCATGCCTGTGGG +
Preference number: 6 (lower is better)
Translates to: VDLGSEKHLVHS*NLTTLFNHACG
Trigger: CCCACAGGCATGATTGAAAAGGGTTGTAAGATTCCAGGAATGAACTAAATGTTTCTCTGAGCCCAAATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590727.1
ENST00000601125.5
CDS CCA 72 bp TTCACTGACTTAACCAAGACGAATCACTTTCATGAGTaGCTTACTTCACCTCTTCTAGGATTGACATCTGTG +
Preference number: 6 (lower is better)
Translates to: FTDLTKTNHFHE*LTSPLLGLTSV
Trigger: CACAGATGTCAATCCTAGAAGAGGTGAAGTAAGCCACTCATGAAAGTGATTCGTCTTGGTTAAGTCAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682406.1
CDS CAA 72 bp AAATCCTTTTTCAGTGCTGATTCTGAGTCTGGAAGTTaGCTCAATGCTCGGAAAAGAGTTTCCGAACAAGCT +
Preference number: 6 (lower is better)
Translates to: KSFFSADSESGS*LNARKRVSEQA
Trigger: AGCTTGTTCGGAAACTCTTTTCCGAGCATTGAGCAAACTTCCAGACTCAGAATCAGCACTGAAAAAGGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683876.1
CDS TCA 72 bp ACCTTTCTTCTCTGCACCACGATTTCAGATGATAGTTaGTTTGGGCTCAGAGAAACATTTAGTTCATTCCTG +
Preference number: 6 (lower is better)
Translates to: TFLLCTTISDDS*FGLRETFSSFL
Trigger: CAGGAATGAACTAAATGTTTCTCTGAGCCCAAATCAACTATCATCTGAAATCGTGGTGCAGAGAAGAAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590727.1
ENST00000601125.5
ENST00000681065.1
CDS GCA 72 bp ATTGGTAAATCCTATTTATCATTCCTCTCACTGATTTaGAGCCTTCTTGTCACAGAGGTGATTCAGGGAACA +
Preference number: 6 (lower is better)
Translates to: IGKSYLSFLSLI*SLLVTEVIQGT
Trigger: TGTTCCCTGAATCACCTCTGTGACAAGAAGGCTGCAAATCAGTGAGAGGAATGATAAATAGGATTTACCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683705.1
ENST00000684610.1
CDS CCA 72 bp GTTGATTTGGGCTCAGAGAAACATTTAGTTCATTCCTaGAATCTTACAACCCTTTTCAATCATGCCATTTTC +
Preference number: 6 (lower is better)
Translates to: VDLGSEKHLVHS*NLTTLFNHAIF
Trigger: GAAAATGGCATGATTGAAAAGGGTTGTAAGATTCCAGGAATGAACTAAATGTTTCTCTGAGCCCAAATCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681065.1
CDS TCA 72 bp ATTGGTAATTACAACAGAGATCATAACAGAACTCTCTaGAATTCTAGGGAGAGCTATGAGTATGAAATCCAG +
Preference number: 6 (lower is better)
Translates to: IGNYNRDHNRTL*NSRESYEYEIQ
Trigger: CTGGATTTCATACTCATAGCTCTCCCTAGAATTTCAGAGAGTTCTGTTATGATCTCTGTTGTAATTACCAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399121.9
ENST00000554864.7
ENST00000588125.5
ENST00000588684.5
ENST00000591816.6
ENST00000598334.5
ENST00000683705.1
ENST00000684610.1