RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DTHD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000197057

Ensembl transcript IDs: ENST00000357504.7, ENST00000456874.3, ENST00000503528.1, ENST00000506008.1, ENST00000507598.5, ENST00000639862.2

Found 444 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCTGGGTGTGCAGGAGGGGTGTGTTTGTGACAGCATATGTGAGGTaGACAAGTGGACCCGAAACAGTGCTGATAAAGGGTAGGCCTGTG +
Preference number: 1 (lower is better)
Translates to: SWVCRRGVFVTAYVR*TSGPETVLIKGRPV
Trigger: CACAGGCCTACCCTTTATCAGCACTGTTTCGGGTCCACTTGTGCACCTCACATATGCTGTCACAAACACACCCCTCCTGCACACCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR CCA 90 bp TGCTGGGGCTTTGCATTAGCAAAAGCGAACAAGGCATCTCTGATGTaGTCCATACAGGTTGGCTCACCAGACAGAGAAATGGGTATGCAA +
Preference number: 1 (lower is better)
Translates to: CWGFALAKANKASLM*SIQVGSPDREMGMQ
Trigger: TTGCATACCCATTTCTCTGTCTGGTGAGCCAACCTGTATGGACCACATCAGAGATGCCTTGTTCGCTTTTGCTAATGCAAAGCCCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR TCA 90 bp CAAGCTCTACCCCGAACACCTTGGGCATATGTCATCAGGATCTTCTaGGGCTGTTACGGGCCTGTCCTTAACCTTGGCAAAATAATCTTT +
Preference number: 1 (lower is better)
Translates to: QALPRTPWAYVIRIF*GCYGPVLNLGKIIF
Trigger: AAAGATTATTTTGCCAAGGTTAAGGACAGGCCCGTAACAGCCTCAGAAGATCCTGATGACATATGCCCAAGGTGTTCGGGGTAGAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR CCA 90 bp ATTAGCAAAAGCGAACAAGGCATCTCTGATGTGGTCCATACAGGTTaGCTCACCAGACAGAGAAATGGGTATGCAAAGGTATGGGTGTGT +
Preference number: 1 (lower is better)
Translates to: ISKSEQGISDVVHTG*LTRQRNGYAKVWVC
Trigger: ACACACCCATACCTTTGCATACCCATTTCTCTGTCTGGTGAGCCAACCTGTATGGACCACATCAGAGATGCCTTGTTCGCTTTTGCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR GCA 90 bp CAAAACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATaGTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATCA +
Preference number: 1 (lower is better)
Translates to: QNIITQPERSAHTQE*FLLSDPCFSLCLTS
Trigger: TGATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR TCA 90 bp AGGGTTATGACAGGGAGTGTTTTAATGAGATTGTATATGTGCAGGTaGAGTGGTAACGGTAAAGTGAGATGTCGTGTGTGTGTGTGCATG +
Preference number: 1 (lower is better)
Translates to: RVMTGSVLMRLYMCR*SGNGKVRCRVCVCM
Trigger: CATGCACACACACACACGACATCTCACTTTACCGTTACCACTTCACCTGCACATATACAATCTCATTAAAACACTCCCTGTCATAACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR CCA 90 bp TGTCTATCAATACTGAGGGTGTTCAGGGGCAGGTCTCAATCCAAGTaGCACAGATTACACATGGGATTGATTTCCTGGATTATCTTAAGA +
Preference number: 1 (lower is better)
Translates to: CLSILRVFRGRSQSK*HRLHMGLISWIILR
Trigger: TCTTAAGATAATCCAGGAAATCAATCCCATGTGTAATCTGTGCCACTTGGATTGAGACCTGCCCCTGAACACCCTCAGTATTGATAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR GCA 90 bp GAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTATCTGATCCGTaGTTCTCCCTTTGTCTCACATCATTAAATAGCACATCATTAAAT +
Preference number: 1 (lower is better)
Translates to: ERSAHTQECFLLSDP*FSLCLTSLNSTSLN
Trigger: ATTTAATGATGTGCTATTTAATGATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR TCA 90 bp AAAATGTATCTGTGTTGTGAAGAGGTGTGTATATGTGGCTGTGAGTaGATGTATGTGAGTGTATGTGTGAGAGAGAGAAAGAAAGACGGG +
Preference number: 1 (lower is better)
Translates to: KMYLCCEEVCICGCE*MYVSVCVRERKKDG
Trigger: CCCGTCTTTCTTTCTCTCTCTCACACATACACTCACATACATTCACTCACAGCCACATATACACACCTCTTCACAACACAGATACATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR TCA 90 bp TGTTACGGGCCTGTCCTTAACCTTGGCAAAATAATCTTTCTAAATTaGTTGAGAACTGTCTCAGATATTTTTGGGCTCACACTTGAAGTC +
Preference number: 1 (lower is better)
Translates to: CYGPVLNLGKIIFLN*LRTVSDIFGLTLEV
Trigger: GACTTCAAGTGTGAGCCCAAAAATATCTGAGACAGTTCTCAATCAATTTAGAAAGATTATTTTGCCAAGGTTAAGGACAGGCCCGTAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR TCA 90 bp GGCCTTCTTGAGAGGAGCAGTGGTTGCAGGCCAGGGACACAGCCAGGCCAAGATTGGAAGCCCCTGCTTTaGGTTGTCCTACCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: GLLERSSGCRPGTQPGQDWKPLL*VVLPFQ
Trigger: CTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCA...ATCTTGGCCTGGCTGTGTCCCTGGCCTGCAACCACTGCTCCTCTCAAGAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR CAA 90 bp TTGAAGAGACAAGAAGAAGACCAGTTACCAAAGCACAGGAGAGAGTaGGCTAGAGGTGGCCTTCTTGAGAGGAGCAGTGGTTGCAGGCCA +
Preference number: 2 (lower is better)
Translates to: LKRQEEDQLPKHRRE*ARGGLLERSSGCRP
Trigger: TGGCCTGCAACCACTGCTCCTCTCAAGAAGGCCACCTCTAGCCAACTCTCTCCTGTGCTTTGGTAACTGGTCTTCTTCTTGTCTCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR CCA 90 bp GTGTGTCTATCAATACTGAGGGTGTTCAGGGGCAGGTCTCAATCCAAGTGGCACTGTGAGGTGCACAAGTaGACCCGAAACAGTGCTGAT +
Preference number: 2 (lower is better)
Translates to: VCLSILRVFRGRSQSKWHCEVHK*TRNSAD
Trigger: ATCAGCACTGTTTCGGGTCCACTTGTGCACCTCACA...GTGCCACTTGGATTGAGACCTGCCCCTGAACACCCTCAGTATTGATAGACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR TCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCTGGAAGCCCCTGCTTTaGGTTGTCCTACCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFWKPLL*VVLPFQ
Trigger: CTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCA...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR CCA 90 bp GTGTGTCTATCAATACTGAGGGTGTTCAGGGGCAGGTCTCAATCCAAGTGGCACCTAAAGTCTGCTACCTaGAGGCTTCATCTGCATTAT +
Preference number: 2 (lower is better)
Translates to: VCLSILRVFRGRSQSKWHLKSAT*RLHLHY
Trigger: ATAATGCAGATGAAGCCTCCAGGTAGCAGACTTTAG...GTGCCACTTGGATTGAGACCTGCCCCTGAACACCCTCAGTATTGATAGACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR GCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCCTATTATCTGATCCGTaGTTCTCCCTTTGTCTCACA +
Preference number: 2 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFLLSDP*FSLCLT
Trigger: TGTGAGACAAAGGGAGAAGCACGGATCAGATAATAG...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR GCA 90 bp GTGAGGTGCACAAGTGGACCCGAAACAGTGCTGATAAAGGGTAGGCCTGTGTGTTTATTTTCTCTGCACTaGCTCATTTCGCTAATAACA +
Preference number: 2 (lower is better)
Translates to: VRCTSGPETVLIKGRPVCLFSLH*LISLIT
Trigger: TGTTATTAGCGAAATGAGGCAGTGCAGAGAAAATAA...ACACACAGGCCTACCCTTTATCAGCACTGTTTCGGGTCCACTTGTGCACCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR GCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCATTCCCTCTAAAGTCTaGTACCTGGAGGCTTCATCT +
Preference number: 2 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSIPSKV*YLEASS
Trigger: AGATGAAGCCTCCAGGTAGCAGACTTTAGAGGGAAT...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR CAA 90 bp ACACAGTTACTCCAAACAACAAGAGAGCTATTACCACCCTTAGACTaGAAGAGACAAGAAGAAGACCAGTTACCAAAGCACAGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: TQLLQTTRELLPPLD*KRQEEDQLPKHRRE
Trigger: CTCTCTCCTGTGCTTTGGTAACTGGTCTTCTTCTTGTCTCTTCAAGTCTAAGGGTGGTAATAGCTCTCTTGTTGTTTGGAGTAACTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR TCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGATGCTTTCTATTATCTaGTCCGTGCTTCTCCCTTTG +
Preference number: 2 (lower is better)
Translates to: RPNSRQSWLQNIITQPERMLSII*SVLLPL
Trigger: CAAAGGGAGAAGCACGGATCAGATAATAGAAAGCAT...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR TCA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGATGCTTTCTATTATCTaGTCCGTGCTTCTCCCTTTG +
Preference number: 2 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEMLSII*SVLLPL
Trigger: CAAAGGGAGAAGCACGGATCAGATAATAGAAAGCAT...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR GCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCCTATTATCTGATCCGTaGTTCTCCCTTTGTCTCACA +
Preference number: 2 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSLLSDP*FSLCLT
Trigger: TGTGAGACAAAGGGAGAAGCACGGATCAGATAATAG...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR GCA 90 bp TGTGTCTGTGGGGGAGGCATATTAATGAGTGTATGCGTATATGAAATGTGGAGGCTATTATCTGATCCGTaGTTCTCCCTTTGTCTCACA +
Preference number: 2 (lower is better)
Translates to: CVCGGGILMSVCVYEMWRLLSDP*FSLCLT
Trigger: TGTGAGACAAAGGGAGAAGCACGGATCAGATAATAG...CCTCCACATTTCATATACGCATACACTCATTAATATGCCTCCCCCACAGACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR CCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCCTAAAGTCTGCTACCTaGAGGCTTCATCTGCATTAT +
Preference number: 2 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSLKSAT*RLHLHY
Trigger: ATAATGCAGATGAAGCCTCCAGGTAGCAGACTTTAG...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR TCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCTTTTGGGCTCACACTTaGAGTCACAGAAAACTAGTT +
Preference number: 2 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSFWAHT*SHRKLV
Trigger: AACTAGTTTTCTGTGACTTCAAGTGTGAGCCCAAAA...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR GCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCTATAACTCCCTAAAATaGATAAAAGCAAGCTCTACC +
Preference number: 2 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFYNSLK*IKASST
Trigger: GGTAGAGCTTGCTTTTATGCATTTTAGGGAGTTATA...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR GCA 90 bp AGGTTGGCTCACCAGACAGAGAAATGGGTATGCAAAGGTATGGGTGTGTCTATCCGACCTAATGGTTTTTaGATTAATGAGTCAGTGAAA +
Preference number: 2 (lower is better)
Translates to: RLAHQTEKWVCKGMGVSIRPNGF*INESVK
Trigger: TTTCACTGACTCATTAATGCAAAAACCATTAGGTCG...GATAGACACACCCATACCTTTGCATACCCATTTCTCTGTCTGGTGAGCCAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR GCA 90 bp GTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACTCAACAGCATATGTGAGGTaGACAAGTGGACCCGAAACA +
Preference number: 2 (lower is better)
Translates to: VCREVSIRVSMRNIVIYSTAYVR*TSGPET
Trigger: TGTTTCGGGTCCACTTGTGCACCTCACATATGCTGT...TGAGTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR CCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAACTCAAGACAGTCATaGTTGCAAAACATAATCACT +
Preference number: 2 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFNSRQS*LQNIIT
Trigger: AGTGATTATGTTTTGCAACCATGACTGTCTTGAGTT...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR CCA 90 bp GTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACTCATACCCTCCTCTCTTTTaGAATTCAGGAAAAGCTGGC +
Preference number: 2 (lower is better)
Translates to: VCREVSIRVSMRNIVIYSYPPLF*NSGKAG
Trigger: GCCAGCTTTTCCTGAATTCCAAAAGAGAGGAGGGTA...TGAGTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR TCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCATGCTTTCTATTATCTaGTCCGTGCTTCTCCCTTTG +
Preference number: 2 (lower is better)
Translates to: HYKTLVSITSYHSPGISFMLSII*SVLLPL
Trigger: CAAAGGGAGAAGCACGGATCAGATAATAGAAAGCAT...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR TCA 90 bp GTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACTCATTTTGGGCTCACACTTaGAGTCACAGAAAACTAGTT +
Preference number: 2 (lower is better)
Translates to: VCREVSIRVSMRNIVIYSFWAHT*SHRKLV
Trigger: AACTAGTTTTCTGTGACTTCAAGTGTGAGCCCAAAA...TGAGTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR GCA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTTATAACTCCCTAAAATaGATAAAAGCAAGCTCTACC +
Preference number: 2 (lower is better)
Translates to: LLSFGIQEKLASINFNRPYNSLK*IKASST
Trigger: GGTAGAGCTTGCTTTTATGCATTTTAGGGAGTTATA...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR CCA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTAACTCAAGACAGTCATaGTTGCAAAACATAATCACT +
Preference number: 2 (lower is better)
Translates to: LLSFGIQEKLASINFNRPNSRQS*LQNIIT
Trigger: AGTGATTATGTTTTGCAACCATGACTGTCTTGAGTT...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR CCA 90 bp AAGGTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACGTCTGTGCCAGTAAATaGCTGAAGTGTTATTCTATT +
Preference number: 2 (lower is better)
Translates to: KVCREVSIRVSMRNIVIYVCASK*LKCYSI
Trigger: AATAGAATAACACTTCAGCCATTTACTGGCACAGAC...GTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACACCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR CCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCAACTCAAGACAGTCATaGTTGCAAAACATAATCACT +
Preference number: 2 (lower is better)
Translates to: HYKTLVSITSYHSPGISFNSRQS*LQNIIT
Trigger: AGTGATTATGTTTTGCAACCATGACTGTCTTGAGTT...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR CAA 90 bp GGCCTTCTTGAGAGGAGCAGTGGTTGCAGGCCAGGGACACAGCCAGGCCAAGATCTGGAAGCCCCTGCTTaGAGTTGTCCTACCTTTCCA +
Preference number: 3 (lower is better)
Translates to: GLLERSSGCRPGTQPGQDLEAPA*SCPTFP
Trigger: TGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAG...ATCTTGGCCTGGCTGTGTCCCTGGCCTGCAACCACTGCTCCTCTCAAGAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR GCA 72 bp TGCAGGAGGGGTGTGTTTGTGACAGCATATGTGAGGTaGACAAGTGGACCCGAAACAGTGCTGATAAAGGGT +
Preference number: 3 (lower is better)
Translates to: CRRGVFVTAYVR*TSGPETVLIKG
Trigger: ACCCTTTATCAGCACTGTTTCGGGTCCACTTGTGCACCTCACATATGCTGTCACAAACACACCCCTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR CAA 90 bp TGCAGGAGGGGTGTGTTTGTGACAGCATATGTGAGGTGCACAAGTGGACCCGAAATACCCTCCTCTCTTTaGGAATTCAGGAAAAGCTGG +
Preference number: 3 (lower is better)
Translates to: CRRGVFVTAYVRCTSGPEIPSSL*EFRKSW
Trigger: CCAGCTTTTCCTGAATTCCAAAAGAGAGGAGGGTAT...TTCGGGTCCACTTGTGCACCTCACATATGCTGTCACAAACACACCCCTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR CCA 72 bp TGGCTCACCAGACAGAGAAATGGGTATGCAAAGGTATaGGTGTGTCTATCAATACTGAGGGTGTTCAGGGGC +
Preference number: 3 (lower is better)
Translates to: WLTRQRNGYAKV*VCLSILRVFRG
Trigger: GCCCCTGAACACCCTCAGTATTGATAGACACACCCATACCTTTGCATACCCATTTCTCTGTCTGGTGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR CAA 90 bp TGCAGGAGGGGTGTGTTTGTGACAGCATATGTGAGGTGCACAAGTGGACCCGAACTGTCTCAGATATTTTaGGGCTCACACTTGAAGTCA +
Preference number: 3 (lower is better)
Translates to: CRRGVFVTAYVRCTSGPELSQIF*GSHLKS
Trigger: TGACTTCAAGTGTGAGCCCAAAAATATCTGAGACAG...TTCGGGTCCACTTGTGCACCTCACATATGCTGTCACAAACACACCCCTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR CCA 72 bp AGCGAACAAGGCATCTCTGATGTGGTCCATACAGGTTaGCTCACCAGACAGAGAAATGGGTATGCAAAGGTA +
Preference number: 3 (lower is better)
Translates to: SEQGISDVVHTG*LTRQRNGYAKV
Trigger: TACCTTTGCATACCCATTTCTCTGTCTGGTGAGCCAACCTGTATGGACCACATCAGAGATGCCTTGTTCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR CAA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCAGCCCCTGCTTTGAGTaGTCCTACCTTTCCAGATTG +
Preference number: 3 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSSPCFE*SYLSRL
Trigger: CAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCT...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR CAA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTCTGGAAGCCCCTGCTTaGAGTTGTCCTACCTTTCCA +
Preference number: 3 (lower is better)
Translates to: LLSFGIQEKLASINFNRPLEAPA*SCPTFP
Trigger: TGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAG...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR CAA 90 bp GTGTGTCTATCAATACTGAGGGTGTTCAGGGGCAGGTCTCAATCCAAGTGGCACTGGTATCTATGTAACTaGAATTGGTTGCCTGAGTCA +
Preference number: 3 (lower is better)
Translates to: VCLSILRVFRGRSQSKWHWYLCN*NWLPES
Trigger: TGACTCAGGCAACCAATTCAAGTTACATAGATACCA...GTGCCACTTGGATTGAGACCTGCCCCTGAACACCCTCAGTATTGATAGACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR TCA 72 bp GATTGTATATGTGCAGGTGAAGTGGTAACGGTAAAGTaGGATGTCGTGTGTGTGTGTGCATGTGTCTGTGGG +
Preference number: 3 (lower is better)
Translates to: DCICAGEVVTVK*DVVCVCACVCG
Trigger: CCCACAGACACATGCACACACACACACGACATCTCACTTTACCGTTACCACTTCACCTGCACATATACAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR GCA 72 bp AGTGGTAACGGTAAAGTGAGATGTCGTGTGTGTGTGTaGATGTGTCTGTGGGGGAGGCATATTAATGAGTGT +
Preference number: 3 (lower is better)
Translates to: SGNGKVRCRVCV*MCLWGRHINEC
Trigger: ACACTCATTAATATGCCTCCCCCACAGACACATGCACACACACACACGACATCTCACTTTACCGTTACCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR CCA 72 bp ATACTGAGGGTGTTCAGGGGCAGGTCTCAATCCAAGTaGCACAGATTACACATGGGATTGATTTCCTGGATT +
Preference number: 3 (lower is better)
Translates to: ILRVFRGRSQSK*HRLHMGLISWI
Trigger: AATCCAGGAAATCAATCCCATGTGTAATCTGTGCCACTTGGATTGAGACCTGCCCCTGAACACCCTCAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR CAA 90 bp GTGTGTCTATCAATACTGAGGGTGTTCAGGGGCAGGTCTCAATCCAAGTGGCACTGTAACTTGAATTGGTaGCCTGAGTCAACCAAAAAT +
Preference number: 3 (lower is better)
Translates to: VCLSILRVFRGRSQSKWHCNLNW*PESTKN
Trigger: ATTTTTGGTTGACTCAGGCAACCAATTCAAGTTACA...GTGCCACTTGGATTGAGACCTGCCCCTGAACACCCTCAGTATTGATAGACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR TCA 72 bp GAGGAGCGCTCACACCCAGGAATGCTTTCTATTATCTaGTCCGTGCTTCTCCCTTTGTCTCACATCATTAAA +
Preference number: 3 (lower is better)
Translates to: EERSHPGMLSII*SVLLPLSHIIK
Trigger: TTTAATGATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR CCA 72 bp TGTGGTCCATACAGGTTGGCTCACCAGACAGAGAAATaGGTATGCAAAGGTATGGGTGTGTCTATCAATACT +
Preference number: 3 (lower is better)
Translates to: CGPYRLAHQTEK*VCKGMGVSINT
Trigger: AGTATTGATAGACACACCCATACCTTTGCATACCCATTTCTCTGTCTGGTGAGCCAACCTGTATGGACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR CCA 72 bp TTTGCATTAGCAAAAGCGAACAAGGCATCTCTGATGTaGTCCATACAGGTTGGCTCACCAGACAGAGAAATG +
Preference number: 3 (lower is better)
Translates to: FALAKANKASLM*SIQVGSPDREM
Trigger: CATTTCTCTGTCTGGTGAGCCAACCTGTATGGACCACATCAGAGATGCCTTGTTCGCTTTTGCTAATGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR CAA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACATTTTTGGGCTCACACTaGAAGTCACAGAAAACTAGT +
Preference number: 3 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTFLGSH*KSQKTS
Trigger: ACTAGTTTTCTGTGACTTCAAGTGTGAGCCCAAAAA...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR TCA 72 bp TCTTTAAATCTACCTGTGATCTGGAAGCCCCTGCTTTaGGTTGTCCTACCTTTCCAGATTGAGCCAATGTAC +
Preference number: 3 (lower is better)
Translates to: SLNLPVIWKPLL*VVLPFQIEPMY
Trigger: GTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGATCACAGGTAGATTTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR GCA 72 bp GCATGTGTCTGTGGGGGAGGCATATTAATGAGTGTATaGGTATATGAAATGTGGAGGTGGGGTATATGTGAA +
Preference number: 3 (lower is better)
Translates to: ACVCGGGILMSV*VYEMWRWGICE
Trigger: TTCACATATACCCCACCTCCACATTTCATATACGCATACACTCATTAATATGCCTCCCCCACAGACACATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR CAA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCTCAAGACAGTCATGGTaGCAAAACATAATCACTCAA +
Preference number: 3 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFSRQSW*QNIITQ
Trigger: TTGAGTGATTATGTTTTGCAACCATGACTGTCTTGA...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR TCA 72 bp ATGTGGAGGTGGGGTATATGTGAACGAGGACATTTGTaGGAGTGTACAAGTGGATCTGAAACTATATGTGTG +
Preference number: 3 (lower is better)
Translates to: MWRWGICERGHL*ECTSGSETICV
Trigger: CACACATATAGTTTCAGATCCACTTGTACACTCTCACAAATGTCCTCGTTCACATATACCCCACCTCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR GCA 72 bp GCTCACACCCAGGAATGCTTTCTATTATCTGATCCGTaGTTCTCCCTTTGTCTCACATCATTAAATAGCACA +
Preference number: 3 (lower is better)
Translates to: AHTQECFLLSDP*FSLCLTSLNST
Trigger: TGTGCTATTTAATGATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR CAA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCAGCCCCTGCTTTGAGTaGTCCTACCTTTCCAGATTG +
Preference number: 3 (lower is better)
Translates to: HYKTLVSITSYHSPGISFSPCFE*SYLSRL
Trigger: CAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCT...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR CAA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCTCAAGACAGTCATGGTaGCAAAACATAATCACTCAA +
Preference number: 3 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSSRQSW*QNIITQ
Trigger: TTGAGTGATTATGTTTTGCAACCATGACTGTCTTGA...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR-3UTR CAA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTTCAAGACAGTCATGGTaGCAAAACATAATCACTCAA +
Preference number: 3 (lower is better)
Translates to: LLSFGIQEKLASINFNRPSRQSW*QNIITQ
Trigger: TTGAGTGATTATGTTTTGCAACCATGACTGTCTTGA...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR GCA 72 bp CTACCGATGTTTTCAAGCCAACGACCTAATGGTTTTTaGATTAATGAGTCAGTGAAACTAGTTCAATGTCCC +
Preference number: 3 (lower is better)
Translates to: LPMFSSQRPNGF*INESVKLVQCP
Trigger: GGGACATTGAACTAGTTTCACTGACTCATTAATGCAAAAACCATTAGGTCGTTGGCTTGAAAACATCGGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR-3UTR CAA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCTTTTTGGGCTCACACTaGAAGTCACAGAAAACTAGT +
Preference number: 3 (lower is better)
Translates to: HYKTLVSITSYHSPGISFFLGSH*KSQKTS
Trigger: ACTAGTTTTCTGTGACTTCAAGTGTGAGCCCAAAAA...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR CCA 72 bp AATATTTACAATCTATTCCCTCTAAAGTCTGCTACCTaGAGGCTTCATCTGCATTATAAAACTTTGGTCTCC +
Preference number: 3 (lower is better)
Translates to: NIYNLFPLKSAT*RLHLHYKTLVS
Trigger: GGAGACCAAAGTTTTATAATGCAGATGAAGCCTCCAGGTAGCAGACTTTAGAGGGAATAGATTGTAAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
3UTR CAA 72 bp CAAAGCACAGGAGAGAGTTGGCTAGAGGTGGCCTTCTaGAGAGGAGCAGTGGTTGCAGGCCAGGGACACAGC +
Preference number: 4 (lower is better)
Translates to: QSTGESWLEVAF*RGAVVAGQGHS
Trigger: GCTGTGTCCCTGGCCTGCAACCACTGCTCCTCTCAAGAAGGCCACCTCTAGCCAACTCTCTCCTGTGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp GGCCTTCTTGAGAGGAGCAGTGGTTGCAGGCCAGGGACACAGCCAGGCCAAGATCTGCAAGATCACTCCTaGCAATCTTGCGGAGATGTC +
Preference number: 4 (lower is better)
Translates to: GLLERSSGCRPGTQPGQDLQDHS*QSCGDV
Trigger: GACATCTCCGCAAGATTGGCAGGAGTGATCTTGCAG...ATCTTGGCCTGGCTGTGTCCCTGGCCTGCAACCACTGCTCCTCTCAAGAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp GGCCTTCTTGAGAGGAGCAGTGGTTGCAGGCCAGGGACACAGCCAGGCCAAGATGAGATGCTGCAGGGATaGTCAATTGTTTTCTCTATG +
Preference number: 4 (lower is better)
Translates to: GLLERSSGCRPGTQPGQDEMLQG*SIVFSM
Trigger: CATAGAGAAAACAATTGATCATCCCTGCAGCATCTC...ATCTTGGCCTGGCTGTGTCCCTGGCCTGCAACCACTGCTCCTCTCAAGAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACAAGCAGCACATGCAGCTaGTGGCAGGTGGAACGCAGG +
Preference number: 4 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTSSTCS*WQVERR
Trigger: CCTGCGTTCCACCTGCCAGCAGCTGCATGTGCTGCT...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR GCA 90 bp TGCAGGAGGGGTGTGTTTGTGACAGCATATGTGAGGTGCACAAGTGGACCCGAACCAAACCCTTCCAAGTaGAGGTCCTTAAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: CRRGVFVTAYVRCTSGPEPNPSK*RSLSTW
Trigger: CCAGGTGCTTAAGGACCTGCACTTGGAAGGGTTTGG...TTCGGGTCCACTTGTGCACCTCACATATGCTGTCACAAACACACCCCTCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp GGCCTTCTTGAGAGGAGCAGTGGTTGCAGGCCAGGGACACAGCCAGGCCAAGATACAGAGAAATGGGTATaGAAAGGTATGGGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GLLERSSGCRPGTQPGQDTEKWV*KGMGVS
Trigger: AGACACACCCATACCTTTGCATACCCATTTCTCTGT...ATCTTGGCCTGGCTGTGTCCCTGGCCTGCAACCACTGCTCCTCTCAAGAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCGAGAGGAGCAGTGGTTaGAGGCCAGGGACACAGCCA +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFERSSG*RPGTQP
Trigger: TGGCTGTGTCCCTGGCCTGCAACCACTGCTCCTCTC...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp GTGAGGTGCACAAGTGGACCCGAAACAGTGCTGATAAAGGGTAGGCCTGTGTGTTCGGGAATCCATGCTTaGCTTAAGAGCGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: VRCTSGPETVLIKGRPVCSGIHA*LKSEAF
Trigger: AAAGGCCTCGCTCTTAAGTCAAGCATGGATTCCCGA...ACACACAGGCCTACCCTTTATCAGCACTGTTTCGGGTCCACTTGTGCACCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACACCAGAAAGACCACAGTaGCCATCCAAGTGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTPERPQ*PSKWPH
Trigger: GTGGGGCCACTTGGATGGCCACTGTGGTCTTTCTGG...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR CCA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTGCAGCTGCTGGCAGGTaGAACGCAGGGTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLSFGIQEKLASINFNRPAAAGR*NAGCLR
Trigger: CCTCAGGCACCCTGCGTTCCACCTGCCAGCAGCTGC...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR CCA 90 bp GTGAGGTGCACAAGTGGACCCGAAACAGTGCTGATAAAGGGTAGGCCTGTGTGTTCCTCAGCCAGCCAATaGAGCAAGTTATCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: VRCTSGPETVLIKGRPVCSSASQ*SKLSQR
Trigger: CCTTTGGGATAACTTGCTCCATTGGCTGGCTGAGGA...ACACACAGGCCTACCCTTTATCAGCACTGTTTCGGGTCCACTTGTGCACCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACACACTCCTGCCAATCTTaGGGAGATGTCGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTHSCQS*GDVEPG
Trigger: TCCTGGCTCGACATCTCCGCAAGATTGGCAGGAGTG...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp GTGAGGTGCACAAGTGGACCCGAAACAGTGCTGATAAAGGGTAGGCCTGTGTGTACAGCATATGTGAGGTaGACAAGTGGACCCGAAACA +
Preference number: 4 (lower is better)
Translates to: VRCTSGPETVLIKGRPVCTAYVR*TSGPET
Trigger: TGTTTCGGGTCCACTTGTGCACCTCACATATGCTGT...ACACACAGGCCTACCCTTTATCAGCACTGTTTCGGGTCCACTTGTGCACCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp GTGTGTCTATCAATACTGAGGGTGTTCAGGGGCAGGTCTCAATCCAAGTGGCACCTCCTGTCTGTCTTCTaGTGGGGCTTTGCATTAGCA +
Preference number: 4 (lower is better)
Translates to: VCLSILRVFRGRSQSKWHLLSVF*WGFALA
Trigger: TGCTAATGCAAAGCCCCAGCAGAAGACAGACAGGAG...GTGCCACTTGGATTGAGACCTGCCCCTGAACACCCTCAGTATTGATAGACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCAGCACATGCAGCTGCTaGCAGGTGGAACGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSSTCSC*QVERRV
Trigger: CACCCTGCGTTCCACCTGCCAGCAGCTGCATGTGCT...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR CCA 90 bp TGTGTCTGTGGGGGAGGCATATTAATGAGTGTATGCGTATATGAAATGTGGAGGAGCACATGCAGCTGCTaGCAGGTGGAACGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CVCGGGILMSVCVYEMWRSTCSC*QVERRV
Trigger: CACCCTGCGTTCCACCTGCCAGCAGCTGCATGTGCT...CCTCCACATTTCATATACGCATACACTCATTAATATGCCTCCCCCACAGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp TGCAGGAGGGGTGTGTTTGTGACAGCATATGTGAGGTGCACAAGTGGACCCGAATTGGAAATGACGAGATaGCTCTGGAGGTCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: CRRGVFVTAYVRCTSGPELEMTR*LWRSSK
Trigger: TTTGGAGGACCTCCAGAGCCATCTCGTCATTTCCAA...TTCGGGTCCACTTGTGCACCTCACATATGCTGTCACAAACACACCCCTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGGAGAGAGTTGGGAGCTaGGTGTGCAGGAGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERERVGS*VCRRGV
Trigger: CACACCCCTCCTGCACACCCAGCTCCCAACTCTCTC...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
3UTR CAA 72 bp CAAGAAGAAGACCAGTTACCAAAGCACAGGAGAGAGTaGGCTAGAGGTGGCCTTCTTGAGAGGAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: QEEDQLPKHRRE*ARGGLLERSSG
Trigger: ACCACTGCTCCTCTCAAGAAGGCCACCTCTAGCCAACTCTCTCCTGTGCTTTGGTAACTGGTCTTCTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp GACTTGAAGAGACAAGAAGAAGACCAGTTACCAAAGCACAGGAGAGAGTTGGCTGCACTGCTGAGTTCCTaGCCCAGAAAGACCACAGTG +
Preference number: 4 (lower is better)
Translates to: DLKRQEEDQLPKHRRELAALLSS*PRKTTV
Trigger: CACTGTGGTCTTTCTGGGTCAGGAACTCAGCAGTGC...AGCCAACTCTCTCCTGTGCTTTGGTAACTGGTCTTCTTCTTGTCTCTTCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAGGAACGCAGGGTGCCTaGGGTGTGCTCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSGTQGA*GVLQQL
Trigger: CAGCTGCTGGAGCACACCTCAGGCACCCTGCGTTCC...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR TCA 90 bp GTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACTCAGGAACGCAGGGTGCCTaGGGTGTGCTCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VCREVSIRVSMRNIVIYSGTQGA*GVLQQL
Trigger: CAGCTGCTGGAGCACACCTCAGGCACCCTGCGTTCC...TGAGTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACAGCGCAGAGGGAGAGTTaGGGAAAGAGACTCAGCATT +
Preference number: 4 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTAQRES*GKRLSI
Trigger: AATGCTGAGTCTCTTTCCTCAACTCTCCCTCTGCGC...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACATTGTCAAGCAGCACATaGAGCTGCTGGCAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTLSSST*SCWQVE
Trigger: TTCCACCTGCCAGCAGCTGCATGTGCTGCTTGACAA...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR GCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCCCAAACCCTTCCAAGTaGAGGTCCTTAAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFPNPSK*RSLSTW
Trigger: CCAGGTGCTTAAGGACCTGCACTTGGAAGGGTTTGG...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp TGCAGGAGGGGTGTGTTTGTGACAGCATATGTGAGGTGCACAAGTGGACCCGAAATTCCCTCTAAAGTCTaGTACCTGGAGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: CRRGVFVTAYVRCTSGPEIPSKV*YLEASS
Trigger: AGATGAAGCCTCCAGGTAGCAGACTTTAGAGGGAAT...TTCGGGTCCACTTGTGCACCTCACATATGCTGTCACAAACACACCCCTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp GTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACTCACAGTGGCCATCCAAGTaGCCCCACCAGCCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: VCREVSIRVSMRNIVIYSQWPSK*PHQPPH
Trigger: GTGAGGGGGCTGGTGGGGCCACTTGGATGGCCACTG...TGAGTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATCCAGAAAGACCACAGTaGCCATCCAAGTGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHPERPQ*PSKWPH
Trigger: GTGGGGCCACTTGGATGGCCACTGTGGTCTTTCTGG...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR CCA 90 bp GTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACTCAGCAGCTGCTGGCAGGTaGAACGCAGGGTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VCREVSIRVSMRNIVIYSAAAGR*NAGCLR
Trigger: CCTCAGGCACCCTGCGTTCCACCTGCCAGCAGCTGC...TGAGTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp TGCAGGAGGGGTGTGTTTGTGACAGCATATGTGAGGTGCACAAGTGGACCCGAAAGGTCCTTAAGCACCTaGCTTAAATCTTTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: CRRGVFVTAYVRCTSGPERSLST*LKSLEG
Trigger: GCCTTCCAAAGATTTAAGCCAGGTGCTTAAGGACCT...TTCGGGTCCACTTGTGCACCTCACATATGCTGTCACAAACACACCCCTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTAGGTGAAGGGCACTGCTaGGTTCCTGACCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLGEGHC*VPDPER
Trigger: TCTTTCTGGGTCAGGAACTCAGCAGTGCCCTTCACC...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR TCA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACATCGGGAATCCATGCTTaGCTTAAGAGCGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTSGIHA*LKSEAF
Trigger: AAAGGCCTCGCTCTTAAGTCAAGCATGGATTCCCGA...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp GTGTGTCTATCAATACTGAGGGTGTTCAGGGGCAGGTCTCAATCCAAGTGGCACGCTTGTGGATTGGACTaGGTAGAAAGTATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: VCLSILRVFRGRSQSKWHACGLD*VESILL
Trigger: CAGCAAGATACTTTCTACTCAGTCCAATCCACAAGC...GTGCCACTTGGATTGAGACCTGCCCCTGAACACCCTCAGTATTGATAGACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGTGCAGGCAGTGGTGCTaGGCATGGCTTCCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: AKLKTVMVAKHNHSTREECRQWC*AWLPLK
Trigger: CTTTAGAGGAAGCCATGCTCAGCACCACTGCCTGCA...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTATGCAGGCAGTGGTGCTaGGCATGGCTTCCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLCRQWC*AWLPLK
Trigger: CTTTAGAGGAAGCCATGCTCAGCACCACTGCCTGCA...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCTCTCGAACTTGGAAATaGCGAGATGGCTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFSRTWK*RDGSGG
Trigger: ACCTCCAGAGCCATCTCGTCATTTCCAAGTTCGAGA...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp GTGTGTCTATCAATACTGAGGGTGTTCAGGGGCAGGTCTCAATCCAAGTGGCACGAACGAGGACATTTGTaGGAGTGTACAAGTGGATCT +
Preference number: 4 (lower is better)
Translates to: VCLSILRVFRGRSQSKWHERGHL*ECTSGS
Trigger: AGATCCACTTGTACACTCTCACAAATGTCCTCGTTC...GTGCCACTTGGATTGAGACCTGCCCCTGAACACCCTCAGTATTGATAGACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCCACTCCTGCCAATCTTaGGGAGATGTCGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSHSCQS*GDVEPG
Trigger: TCCTGGCTCGACATCTCCGCAAGATTGGCAGGAGTG...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCCAGTGGCCATCCAAGTaGCCCCACCAGCCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFQWPSK*PHQPPH
Trigger: GTGAGGGGGCTGGTGGGGCCACTTGGATGGCCACTG...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR CCA 90 bp CTTTGCATTAGCAAAAGCGAACAAGGCATCTCTGATGTGGTCCATACAGGTTGGATGACGAGATGGCTCTaGAGGTCCTCCAAACCCTTC +
Preference number: 4 (lower is better)
Translates to: LCISKSEQGISDVVHTGWMTRWL*RSSKPF
Trigger: GAAGGGTTTGGAGGACCTCCAGAGCCATCTCGTCAT...CCAACCTGTATGGACCACATCAGAGATGCCTTGTTCGCTTTTGCTAATGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACATCCTCAGCCAGCCAATaGAGCAAGTTATCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTSSASQ*SKLSQR
Trigger: CCTTTGGGATAACTTGCTCCATTGGCTGGCTGAGGA...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp AAAGTGAGATGTCGTGTGTGTGTGTGCATGTGTCTGTGGGGGAGGCATATTAATCTAAACTCTAGGAGATaGTCCGAGTCAGCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: KVRCRVCVCMCLWGRHINLNSRR*SESASP
Trigger: TGGGCTAGCTGACTCGGATCATCTCCTAGAGTTTAG...ATTAATATGCCTCCCCCACAGACACATGCACACACACACACGACATCTCACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCATGCTCCAGCAGCTGGTaGAGGGCACTGCTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSCSSSW*RALLSS
Trigger: GGAACTCAGCAGTGCCCTTCACCAGCTGCTGGAGCA...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR TCA 90 bp TGCAGGAGGGGTGTGTTTGTGACAGCATATGTGAGGTGCACAAGTGGACCCGAATTCATACAATTCAACTaGTACCAAGCCGCTCTGTAT +
Preference number: 4 (lower is better)
Translates to: CRRGVFVTAYVRCTSGPEFIQFN*YQAALY
Trigger: ATACAGAGCGGCTTGGTATCAGTTGAATTGTATGAA...TTCGGGTCCACTTGTGCACCTCACATATGCTGTCACAAACACACCCCTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp AAAGTGAGATGTCGTGTGTGTGTGTGCATGTGTCTGTGGGGGAGGCATATTAATTCTCGAACTTGGAAATaGCGAGATGGCTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: KVRCRVCVCMCLWGRHINSRTWK*RDGSGG
Trigger: ACCTCCAGAGCCATCTCGTCATTTCCAAGTTCGAGA...ATTAATATGCCTCCCCCACAGACACATGCACACACACACACGACATCTCACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATCTCAGCATTTTCTTCTaGGAGCTCCTCAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHLSIFF*ELLSQP
Trigger: TGGCTGGCTGAGGAGCTCTCAGAAGAAAATGCTGAG...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATTGGAAGCCCCTGCTTTaGGTTGTCCTACCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHWKPLL*VVLPFQ
Trigger: CTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCA...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCGCTGCTTTGGTATCTTaGATGGAGGACATTGTCTGC +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFAALVS*MEDIVC
Trigger: GCAGACAATGTCCTCCATTCAAGATACCAAAGCAGC...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp TGCAGGAGGGGTGTGTTTGTGACAGCATATGTGAGGTGCACAAGTGGACCCGAATTCTCTTGGGCTTTCTaGAGTCTCTTGAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: CRRGVFVTAYVRCTSGPEFSWAF*SLLNFC
Trigger: ACAGAAATTCAAGAGACTTCAGAAAGCCCAAGAGAA...TTCGGGTCCACTTGTGCACCTCACATATGCTGTCACAAACACACCCCTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGTTGTCAAGCAGCACATaGAGCTGCTGGCAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERLSSST*SCWQVE
Trigger: TTCCACCTGCCAGCAGCTGCATGTGCTGCTTGACAA...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR GCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATCCAAACCCTTCCAAGTaGAGGTCCTTAAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHPNPSK*RSLSTW
Trigger: CCAGGTGCTTAAGGACCTGCACTTGGAAGGGTTTGG...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp GTGAGGTGCACAAGTGGACCCGAAACAGTGCTGATAAAGGGTAGGCCTGTGTGTTATAAACGACAATGGTaGCTTTGTAATGAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: VRCTSGPETVLIKGRPVCYKRQW*LCNEGN
Trigger: GTTGCCCTCATTACAAAGGCACCATTGTCGTTTATA...ACACACAGGCCTACCCTTTATCAGCACTGTTTCGGGTCCACTTGTGCACCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp AGGTTGGCTCACCAGACAGAGAAATGGGTATGCAAAGGTATGGGTGTGTCTATCTTCTGTGACTCTTCTTaGCCCAGTACACGTCCATTC +
Preference number: 4 (lower is better)
Translates to: RLAHQTEKWVCKGMGVSIFCDSS*PSTRPF
Trigger: GAATGGACGTGTACTGGGGCAAGAAGAGTCACAGAA...GATAGACACACCCATACCTTTGCATACCCATTTCTCTGTCTGGTGAGCCAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp GTGAGGTGCACAAGTGGACCCGAAACAGTGCTGATAAAGGGTAGGCCTGTGTGTATGAGAATGAACCATTaGCACACACAGCAAAATGGA +
Preference number: 4 (lower is better)
Translates to: VRCTSGPETVLIKGRPVCMRMNH*HTQQNG
Trigger: TCCATTTTGCTGTGTGTGGCAATGGTTCATTCTCAT...ACACACAGGCCTACCCTTTATCAGCACTGTTTCGGGTCCACTTGTGCACCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp GTGAGGTGCACAAGTGGACCCGAAACAGTGCTGATAAAGGGTAGGCCTGTGTGTAACAGCTATTCTATGTaGATTGTCCTTCTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: VRCTSGPETVLIKGRPVCNSYSM*IVLLVR
Trigger: TCTCACCAGAAGGACAATCCACATAGAATAGCTGTT...ACACACAGGCCTACCCTTTATCAGCACTGTTTCGGGTCCACTTGTGCACCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp GTGTGTCTATCAATACTGAGGGTGTTCAGGGGCAGGTCTCAATCCAAGTGGCACCCTGGCTTAAATCTTTaGAAGGCACCACTAAAACAG +
Preference number: 4 (lower is better)
Translates to: VCLSILRVFRGRSQSKWHPGLNL*KAPLKQ
Trigger: CTGTTTTAGTGGTGCCTTCCAAAGATTTAAGCCAGG...GTGCCACTTGGATTGAGACCTGCCCCTGAACACCCTCAGTATTGATAGACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGATGACGAGATGGCTCTaGAGGTCCTCCAAACCCTTC +
Preference number: 4 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEMTRWL*RSSKPF
Trigger: GAAGGGTTTGGAGGACCTCCAGAGCCATCTCGTCAT...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATATGACGAGATGGCTCTaGAGGTCCTCCAAACCCTTC +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHMTRWL*RSSKPF
Trigger: GAAGGGTTTGGAGGACCTCCAGAGCCATCTCGTCAT...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp TGCAGGAGGGGTGTGTTTGTGACAGCATATGTGAGGTGCACAAGTGGACCCGAAAAGCAAAGAAACTCGTaGATCTGTTCTGTGAGATCA +
Preference number: 4 (lower is better)
Translates to: CRRGVFVTAYVRCTSGPEKQRNS*ICSVRS
Trigger: TGATCTCACAGAACAGATCCACGAGTTTCTTTGCTT...TTCGGGTCCACTTGTGCACCTCACATATGCTGTCACAAACACACCCCTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCTGCTCCAGCAGCTGGTaGAGGGCACTGCTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFCSSSW*RALLSS
Trigger: GGAACTCAGCAGTGCCCTTCACCAGCTGCTGGAGCA...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR TCA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACAGCTTGTGGATTGGACTaGGTAGAAAGTATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTACGLD*VESILL
Trigger: CAGCAAGATACTTTCTACTCAGTCCAATCCACAAGC...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGGGATTGTCCTTCTGGTaGGACAGTACTATGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERGLSFW*DSTMQA
Trigger: TGCCTGCATAGTACTGTCTCACCAGAAGGACAATCC...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp TGTGTCTGTGGGGGAGGCATATTAATGAGTGTATGCGTATATGAAATGTGGAGGGGATTGTCCTTCTGGTaGGACAGTACTATGCAGGCA +
Preference number: 4 (lower is better)
Translates to: CVCGGGILMSVCVYEMWRGLSFW*DSTMQA
Trigger: TGCCTGCATAGTACTGTCTCACCAGAAGGACAATCC...CCTCCACATTTCATATACGCATACACTCATTAATATGCCTCCCCCACAGACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATTCTCGAACTTGGAAATaGCGAGATGGCTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHSRTWK*RDGSGG
Trigger: ACCTCCAGAGCCATCTCGTCATTTCCAAGTTCGAGA...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTGCGCAGAGGGAGAGTTaGGGAAAGAGACTCAGCATT +
Preference number: 4 (lower is better)
Translates to: LLSFGIQEKLASINFNRPAQRES*GKRLSI
Trigger: AATGCTGAGTCTCTTTCCTCAACTCTCCCTCTGCGC...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATTTGAGTTTGATGAGCTaGATGGTGCTACGGCGCAGA +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHLSLMS*MVLRRR
Trigger: TCTGCGCCGTAGCACCATTCAGCTCATCAAACTCAA...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACAGGCGAAGTTTGTCGGTaGAAGTTGGAAGCGATTTTT +
Preference number: 4 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTGEVCR*KLEAIF
Trigger: AAAAATCGCTTCCAACTTTCACCGACAAACTTCGCC...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCGAGTGTATGCGTATATaGAATGTGGAGGTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFECMRI*NVEVGY
Trigger: ATACCCCACCTCCACATTTCATATACGCATACACTC...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCTCACCCAAGAGTGCCTaGTTTAGCATCTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFSPKSA*FSIWFC
Trigger: ACAAAACCAGATGCTAAAGCAGGCACTCTTGGGTGA...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR GCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCAGGTGGAACGCAGGGTaGCTGAGGTGTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFRWNAG*LRCAPA
Trigger: TGCTGGAGCACACCTCAGGCACCCTGCGTTCCACCT...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR GCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATCTGCAAGATCACTCCTaGCAATCTTGCGGAGATGTC +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHLQDHS*QSCGDV
Trigger: GACATCTCCGCAAGATTGGCAGGAGTGATCTTGCAG...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTACTGCAAGATCACTCCTaGCAATCTTGCGGAGATGTC +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLLQDHS*QSCGDV
Trigger: GACATCTCCGCAAGATTGGCAGGAGTGATCTTGCAG...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACAATTCCCTCTAAAGTCTaGTACCTGGAGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTIPSKV*YLEASS
Trigger: AGATGAAGCCTCCAGGTAGCAGACTTTAGAGGGAAT...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp GTGAGGTGCACAAGTGGACCCGAAACAGTGCTGATAAAGGGTAGGCCTGTGTGTGGAGTACATTCATCATaGATGCCGCATAAATTACAA +
Preference number: 4 (lower is better)
Translates to: VRCTSGPETVLIKGRPVCGVHSS*MPHKLQ
Trigger: TTGTAATTTATGCGGCATGCATGATGAATGTACTCC...ACACACAGGCCTACCCTTTATCAGCACTGTTTCGGGTCCACTTGTGCACCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTAGCTGGGTCAACTGGTTaGATCTTTAACTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLAGSTG*IFNCTS
Trigger: GCTGGTGCAGTTAAAGATCCAACCAGTTGACCCAGC...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp TGTGTCTGTGGGGGAGGCATATTAATGAGTGTATGCGTATATGAAATGTGGAGGGCTGGGTCAACTGGTTaGATCTTTAACTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: CVCGGGILMSVCVYEMWRAGSTG*IFNCTS
Trigger: GCTGGTGCAGTTAAAGATCCAACCAGTTGACCCAGC...CCTCCACATTTCATATACGCATACACTCATTAATATGCCTCCCCCACAGACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATATGTGCCACCAGAGCTaGGTCAACTGGTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHMCHQS*VNWLDL
Trigger: AAGATCCAACCAGTTGACCCAGCTCTGGTGGCACAT...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCATGTGCCACCAGAGCTaGGTCAACTGGTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSMCHQS*VNWLDL
Trigger: AAGATCCAACCAGTTGACCCAGCTCTGGTGGCACAT...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp TGTGTCTGTGGGGGAGGCATATTAATGAGTGTATGCGTATATGAAATGTGGAGGATGTGCCACCAGAGCTaGGTCAACTGGTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: CVCGGGILMSVCVYEMWRMCHQS*VNWLDL
Trigger: AAGATCCAACCAGTTGACCCAGCTCTGGTGGCACAT...CCTCCACATTTCATATACGCATACACTCATTAATATGCCTCCCCCACAGACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACAGAATCAGAGGGCTTGTaGATTGGACTGAGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTESEGL*IGLSRK
Trigger: CTTTCTACTCAGTCCAATCCACAAGCCCTCTGATTC...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGTCCTTAAGCACCTaGCTTAAATCTTTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFRSLST*LKSLEG
Trigger: GCCTTCCAAAGATTTAAGCCAGGTGCTTAAGGACCT...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATTCCTCAGCCAGCCAATaGAGCAAGTTATCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHSSASQ*SKLSQR
Trigger: CCTTTGGGATAACTTGCTCCATTGGCTGGCTGAGGA...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCTACCCTCCTCTCTTTTaGAATTCAGGAAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFYPPLF*NSGKAG
Trigger: GCCAGCTTTTCCTGAATTCCAAAAGAGAGGAGGGTA...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACATACCCTCCTCTCTTTTaGAATTCAGGAAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTYPPLF*NSGKAG
Trigger: GCCAGCTTTTCCTGAATTCCAAAAGAGAGGAGGGTA...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp GTGAGGTGCACAAGTGGACCCGAAACAGTGCTGATAAAGGGTAGGCCTGTGTGTCTATGTAACTTGAATTaGTTGCCTGAGTCAACCAAA +
Preference number: 4 (lower is better)
Translates to: VRCTSGPETVLIKGRPVCLCNLN*LPESTK
Trigger: TTTGGTTGACTCAGGCAACCAATTCAAGTTACATAG...ACACACAGGCCTACCCTTTATCAGCACTGTTTCGGGTCCACTTGTGCACCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATTGTGAGGTGCACAAGTaGACCCGAAACAGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHCEVHK*TRNSAD
Trigger: ATCAGCACTGTTTCGGGTCCACTTGTGCACCTCACA...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp GTGAGGTGCACAAGTGGACCCGAAACAGTGCTGATAAAGGGTAGGCCTGTGTGTATGGGATTGATTTCCTaGATTATCTTAAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: VRCTSGPETVLIKGRPVCMGLIS*IILREE
Trigger: CTCCTCTCTTAAGATAATCCAGGAAATCAATCCCAT...ACACACAGGCCTACCCTTTATCAGCACTGTTTCGGGTCCACTTGTGCACCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp AGGTTGGCTCACCAGACAGAGAAATGGGTATGCAAAGGTATGGGTGTGTCTATCAGGTCTCAATCCAAGTaGCACAGATTACACATGGGA +
Preference number: 4 (lower is better)
Translates to: RLAHQTEKWVCKGMGVSIRSQSK*HRLHMG
Trigger: TCCCATGTGTAATCTGTGCCACTTGGATTGAGACCT...GATAGACACACCCATACCTTTGCATACCCATTTCTCTGTCTGGTGAGCCAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCCACTGTCTTGGCTTCTaGATCCCAGTAATTTCAAAC +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFHCLGF*IPVISN
Trigger: GTTTGAAATTACTGGGATTCAGAAGCCAAGACAGTG...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCATGCAGGCAGTGGTGCTaGGCATGGCTTCCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSCRQWC*AWLPLK
Trigger: CTTTAGAGGAAGCCATGCTCAGCACCACTGCCTGCA...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTTTGAGTTTGATGAGCTaGATGGTGCTACGGCGCAGA +
Preference number: 4 (lower is better)
Translates to: LLSFGIQEKLASINFNRPLSLMS*MVLRRR
Trigger: TCTGCGCCGTAGCACCATTCAGCTCATCAAACTCAA...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp TGTGTCTGTGGGGGAGGCATATTAATGAGTGTATGCGTATATGAAATGTGGAGGGAGGTGGGGTATATGTaGACGAGGACATTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: CVCGGGILMSVCVYEMWREVGYM*TRTFVR
Trigger: TCTCACAAATGTCCTCGTTCACATATACCCCACCTC...CCTCCACATTTCATATACGCATACACTCATTAATATGCCTCCCCCACAGACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp GTGTGTCTATCAATACTGAGGGTGTTCAGGGGCAGGTCTCAATCCAAGTGGCACTTTTGTCTCCAAATCTaGTTCAATATTTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: VCLSILRVFRGRSQSKWHFCLQI*FNIWPS
Trigger: ACTGGGCCAAATATTGAAGCAGATTTGGAGACAAAA...GTGCCACTTGGATTGAGACCTGCCCCTGAACACCCTCAGTATTGATAGACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGGGTTGGATCTTTAACTaGACCAGCACTGGAGAGGTA +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERGWIFN*TSTGEV
Trigger: TACCTCTCCAGTGCTGGTGCAGTTAAAGATCCAACC...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCACACTCCTGCCAATCTTaGGGAGATGTCGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSHSCQS*GDVEPG
Trigger: TCCTGGCTCGACATCTCCGCAAGATTGGCAGGAGTG...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACAGAATTTGAGCTCTTCTaGAAGATCACTCCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTEFELF*KITPAN
Trigger: ATTGGCAGGAGTGATCTTGCAGAAGAGCTCAAATTC...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCTGCAGCAATGTCTGCTaGTTTGGTATCTTGAATGGA +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFCSNVC*FGILNG
Trigger: TCCATTCAAGATACCAAAGCAGCAGACATTGCTGCA...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCTTCTGTGACTCTTCTTaGCCCAGTACACGTCCATTC +
Preference number: 4 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSFCDSS*PSTRPF
Trigger: GAATGGACGTGTACTGGGGCAAGAAGAGTCACAGAA...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp GTGTGTCTATCAATACTGAGGGTGTTCAGGGGCAGGTCTCAATCCAAGTGGCACTTTATGATCCAAAAGTaGTATTTTCTCTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VCLSILRVFRGRSQSKWHFMIQK*YFLSCQ
Trigger: CTGGCAGGAGAGAAAATACCACTTTTGGATCATAAA...GTGCCACTTGGATTGAGACCTGCCCCTGAACACCCTCAGTATTGATAGACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp AGGTTGGCTCACCAGACAGAGAAATGGGTATGCAAAGGTATGGGTGTGTCTATCCCAAGCCGCTCTGTATaGTTTTCACAACATCATCAA +
Preference number: 4 (lower is better)
Translates to: RLAHQTEKWVCKGMGVSIPSRSV*FSQHHQ
Trigger: TTGATGATGTTGTGAAAACCATACAGAGCGGCTTGG...GATAGACACACCCATACCTTTGCATACCCATTTCTCTGTCTGGTGAGCCAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATTTGGAAATGACGAGATaGCTCTGGAGGTCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHLEMTR*LWRSSK
Trigger: TTTGGAGGACCTCCAGAGCCATCTCGTCATTTCCAA...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGTTGGAAATGACGAGATaGCTCTGGAGGTCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERLEMTR*LWRSSK
Trigger: TTTGGAGGACCTCCAGAGCCATCTCGTCATTTCCAA...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACACTTTGGTATCTTGAATaGAGGACATTGTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTLWYLE*RTLSAV
Trigger: CACAGCAGACAATGTCCTCCATTCAAGATACCAAAG...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATGTGTGCATGTGTCTGTaGGGGAGGCATATTAATGAG +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHVCMCL*GRHINE
Trigger: CTCATTAATATGCCTCCCCCACAGACACATGCACAC...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCGCACTGCTGAGTTCCTaGCCCAGAAAGACCACAGTG +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFALLSS*PRKTTV
Trigger: CACTGTGGTCTTTCTGGGTCAGGAACTCAGCAGTGC...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR TCA 90 bp AGGTTGGCTCACCAGACAGAGAAATGGGTATGCAAAGGTATGGGTGTGTCTATCCACACACTTTCACCATaGTATCTCTGTAATTTCCTC +
Preference number: 4 (lower is better)
Translates to: RLAHQTEKWVCKGMGVSIHTLSP*YLCNFL
Trigger: GAGGAAATTACAGAGATATCATGGTGAAAGTGTGTG...GATAGACACACCCATACCTTTGCATACCCATTTCTCTGTCTGGTGAGCCAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCACTCAGCATTTTCTTCTaGGAGCTCCTCAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSLSIFF*ELLSQP
Trigger: TGGCTGGCTGAGGAGCTCTCAGAAGAAAATGCTGAG...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAGCGCAGAGGGAGAGTTaGGGAAAGAGACTCAGCATT +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSAQRES*GKRLSI
Trigger: AATGCTGAGTCTCTTTCCTCAACTCTCCCTCTGCGC...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGGGCGAAGTTTGTCGGTaGAAGTTGGAAGCGATTTTT +
Preference number: 4 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEGEVCR*KLEAIF
Trigger: AAAAATCGCTTCCAACTTTCACCGACAAACTTCGCC...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGGGCGAAGTTTGTCGGTaGAAGTTGGAAGCGATTTTT +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERGEVCR*KLEAIF
Trigger: AAAAATCGCTTCCAACTTTCACCGACAAACTTCGCC...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCTTTTGGGCTCACACTTaGAGTCACAGAAAACTAGTT +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFFWAHT*SHRKLV
Trigger: AACTAGTTTTCTGTGACTTCAAGTGTGAGCCCAAAA...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp CTTTGCATTAGCAAAAGCGAACAAGGCATCTCTGATGTGGTCCATACAGGTTGGGTGTACAAGTGGATCTaGAACTATATGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LCISKSEQGISDVVHTGWVYKWI*NYMCVR
Trigger: CCTCACACACATATAGTTTCAGATCCACTTGTACAC...CCAACCTGTATGGACCACATCAGAGATGCCTTGTTCGCTTTTGCTAATGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTAATTCCCTCTAAAGTCTaGTACCTGGAGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLIPSKV*YLEASS
Trigger: AGATGAAGCCTCCAGGTAGCAGACTTTAGAGGGAAT...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp AAAGTGAGATGTCGTGTGTGTGTGTGCATGTGTCTGTGGGGGAGGCATATTAATCCATTTATATCCAACTaGTTCAGAGAGCTAAAGGGC +
Preference number: 4 (lower is better)
Translates to: KVRCRVCVCMCLWGRHINPFISN*FRELKG
Trigger: GCCCTTTAGCTCTCTGAAGCAGTTGGATATAAATGG...ATTAATATGCCTCCCCCACAGACACATGCACACACACACACGACATCTCACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGATCTGCTTCAATATTTaGCCCAGTTTACCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEICFNI*PSLPEP
Trigger: GGGCTCAGGTAAACTGGGCCAAATATTGAAGCAGAT...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR CCA 90 bp TGTGTCTGTGGGGGAGGCATATTAATGAGTGTATGCGTATATGAAATGTGGAGGATCTGCTTCAATATTTaGCCCAGTTTACCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: CVCGGGILMSVCVYEMWRICFNI*PSLPEP
Trigger: GGGCTCAGGTAAACTGGGCCAAATATTGAAGCAGAT...CCTCCACATTTCATATACGCATACACTCATTAATATGCCTCCCCCACAGACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGGCCTGCTTTAGCATCTaGTTTTGTCTCCAAATCTGC +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERACFSI*FCLQIC
Trigger: GCAGATTTGGAGACAAAACCAGATGCTAAAGCAGGC...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR CCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGGAATCAGAGGGCTTGTaGATTGGACTGAGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERESEGL*IGLSRK
Trigger: CTTTCTACTCAGTCCAATCCACAAGCCCTCTGATTC...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCGAATCAGAGGGCTTGTaGATTGGACTGAGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSESEGL*IGLSRK
Trigger: CTTTCTACTCAGTCCAATCCACAAGCCCTCTGATTC...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAATGACTATTGTCCATaGTGGAAGAGAGGTGAAGTA +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFNDYCP*WKRGEV
Trigger: TACTTCACCTCTCTTCCACCATGGACAATAGTCATT...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAACAGCTATTCTATGTaGATTGTCCTTCTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFNSYSM*IVLLVR
Trigger: TCTCACCAGAAGGACAATCCACATAGAATAGCTGTT...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTAAGGTCCTTAAGCACCTaGCTTAAATCTTTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLRSLST*LKSLEG
Trigger: GCCTTCCAAAGATTTAAGCCAGGTGCTTAAGGACCT...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGTACCCTCCTCTCTTTTaGAATTCAGGAAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERYPPLF*NSGKAG
Trigger: GCCAGCTTTTCCTGAATTCCAAAAGAGAGGAGGGTA...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp CTTTGCATTAGCAAAAGCGAACAAGGCATCTCTGATGTGGTCCATACAGGTTGGCTTTGGTATCTTGAATaGAGGACATTGTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LCISKSEQGISDVVHTGWLWYLE*RTLSAV
Trigger: CACAGCAGACAATGTCCTCCATTCAAGATACCAAAG...CCAACCTGTATGGACCACATCAGAGATGCCTTGTTCGCTTTTGCTAATGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCATATTATTGAGGATGTaGTCATCTCTTCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFILLRM*SSLLLG
Trigger: GCCCAAGAGAAGAGATGACCACATCCTCAATAATAT...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTACTGTCTGTCTTCTGCTaGGGCTTTGCATTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLLSVFC*GFALAK
Trigger: TTTTGCTAATGCAAAGCCCCAGCAGAAGACAGACAG...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCACTAAACTCTAGGAGATaGTCCGAGTCAGCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSLNSRR*SESASP
Trigger: TGGGCTAGCTGACTCGGATCATCTCCTAGAGTTTAG...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR TCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCTTTCTCGAGACACATTaGTTCTCTTTGTCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSFLETH*FSLSSS
Trigger: GCTGCTTGACAAAGAGAATCAATGTGTCTCGAGAAA...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR TCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCATCGGGAATCCATGCTTaGCTTAAGAGCGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSSGIHA*LKSEAF
Trigger: AAAGGCCTCGCTCTTAAGTCAAGCATGGATTCCCGA...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATCACTGTCTTGGCTTCTaGATCCCAGTAATTTCAAAC +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHHCLGF*IPVISN
Trigger: GTTTGAAATTACTGGGATTCAGAAGCCAAGACAGTG...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAGGATTGTCCTTCTGGTaGGACAGTACTATGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSGLSFW*DSTMQA
Trigger: TGCCTGCATAGTACTGTCTCACCAGAAGGACAATCC...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCCTCAGCATTTTCTTCTaGGAGCTCCTCAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFLSIFF*ELLSQP
Trigger: TGGCTGGCTGAGGAGCTCTCAGAAGAAAATGCTGAG...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTAATGCTTTCTATTATCTaGTCCGTGCTTCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLMLSII*SVLLPL
Trigger: CAAAGGGAGAAGCACGGATCAGATAATAGAAAGCAT...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATATGCTTTCTATTATCTaGTCCGTGCTTCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHMLSII*SVLLPL
Trigger: CAAAGGGAGAAGCACGGATCAGATAATAGAAAGCAT...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp AAAGTGAGATGTCGTGTGTGTGTGTGCATGTGTCTGTGGGGGAGGCATATTAATTTTTGGGCTCACACTTaGAGTCACAGAAAACTAGTT +
Preference number: 4 (lower is better)
Translates to: KVRCRVCVCMCLWGRHINFWAHT*SHRKLV
Trigger: AACTAGTTTTCTGTGACTTCAAGTGTGAGCCCAAAA...ATTAATATGCCTCCCCCACAGACACATGCACACACACACACGACATCTCACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCTGGAAGCCCCTGCTTTaGGTTGTCCTACCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFWKPLL*VVLPFQ
Trigger: CTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCA...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCGATATCACATATTATTaGGGATGTGGTCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFDITYY*GCGHLF
Trigger: GAAGAGATGACCACATCCTCAATAATATGTGATATC...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp TGTGTCTGTGGGGGAGGCATATTAATGAGTGTATGCGTATATGAAATGTGGAGGTTGTATATGTGCAGGTaGAGTGGTAACGGTAAAGTG +
Preference number: 4 (lower is better)
Translates to: CVCGGGILMSVCVYEMWRLYMCR*SGNGKV
Trigger: CACTTTACCGTTACCACTTCACCTGCACATATACAA...CCTCCACATTTCATATACGCATACACTCATTAATATGCCTCCCCCACAGACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp GTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACTCATGTGTCTATCAATACTaGGGGTGTTCAGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VCREVSIRVSMRNIVIYSCVYQY*GCSGAG
Trigger: ACCTGCCCCTGAACACCCTCAGTATTGATAGACACA...TGAGTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCCATAATCCTTCCCGTTaGTTGAAGCAAATATGTTTC +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFHNPSR*LKQICF
Trigger: GAAACATATTTGCTTCAAGCAACGGGAAGGATTATG...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTAGAATTTGAGCTCTTCTaGAAGATCACTCCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLEFELF*KITPAN
Trigger: ATTGGCAGGAGTGATCTTGCAGAAGAGCTCAAATTC...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCGAATTTGAGCTCTTCTaGAAGATCACTCCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSEFELF*KITPAN
Trigger: ATTGGCAGGAGTGATCTTGCAGAAGAGCTCAAATTC...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTAGCTACATCAAAACACTaGTGTGGTTCAGTGAACACT +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLATSKH*CGSVNT
Trigger: AGTGTTCACTGAACCACAGCAGTGTTTTGATGTAGC...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTACTATTATCTGATCCGTaGTTCTCCCTTTGTCTCACA +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLLLSDP*FSLCLT
Trigger: TGTGAGACAAAGGGAGAAGCACGGATCAGATAATAG...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGATGGAGGACATTGTCTaGTGTGGAGTACATTCATCA +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERMEDIV*CGVHSS
Trigger: TGATGAATGTACTCCACAGCAGACAATGTCCTCCAT...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGGAGTCTCTTCCCTGTTaGCATTTATGTTCTCAACAG +
Preference number: 4 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEESLPC*HLCSQQ
Trigger: CTGTTGAGAACATAAATGGCAACAGGGAAGAGACTC...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGCTGTTGTCTGAATTATaGCATGAGTCTCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERLLSEL*HESLPC
Trigger: ACAGGGAAGAGACTCATGGCATAATTCAGACAACAG...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCTTTATGATCCAAAAGTaGTATTTTCTCTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFFMIQK*YFLSCQ
Trigger: CTGGCAGGAGAGAAAATACCACTTTTGGATCATAAA...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR CCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTACCAAGCCGCTCTGTATaGTTTTCACAACATCATCAA +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLPSRSV*FSQHHQ
Trigger: TTGATGATGTTGTGAAAACCATACAGAGCGGCTTGG...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGGACTATTGTCCATGGTaGAAGAGAGGTGAAGTACAA +
Preference number: 4 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEDYCPW*KRGEVQ
Trigger: TTGTACTTCACCTCTCTTCCACCATGGACAATAGTC...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTAGACTATTGTCCATGGTaGAAGAGAGGTGAAGTACAA +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLDYCPW*KRGEVQ
Trigger: TTGTACTTCACCTCTCTTCCACCATGGACAATAGTC...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTACCTGGCTTAAATCTTTaGAAGGCACCACTAAAACAG +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLPGLNL*KAPLKQ
Trigger: CTGTTTTAGTGGTGCCTTCCAAAGATTTAAGCCAGG...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGCTAAAGTCTGCTACCTaGAGGCTTCATCTGCATTAT +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERLKSAT*RLHLHY
Trigger: ATAATGCAGATGAAGCCTCCAGGTAGCAGACTTTAG...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGCTAAAGTCTGCTACCTaGAGGCTTCATCTGCATTAT +
Preference number: 4 (lower is better)
Translates to: AKLKTVMVAKHNHSTREELKSAT*RLHLHY
Trigger: ATAATGCAGATGAAGCCTCCAGGTAGCAGACTTTAG...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp TGTGTCTGTGGGGGAGGCATATTAATGAGTGTATGCGTATATGAAATGTGGAGGCTAAAGTCTGCTACCTaGAGGCTTCATCTGCATTAT +
Preference number: 4 (lower is better)
Translates to: CVCGGGILMSVCVYEMWRLKSAT*RLHLHY
Trigger: ATAATGCAGATGAAGCCTCCAGGTAGCAGACTTTAG...CCTCCACATTTCATATACGCATACACTCATTAATATGCCTCCCCCACAGACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATGGACATTGTCTGCTGTaGAGTACATTCATCATGCAT +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHGHCLL*STFIMH
Trigger: ATGCATGATGAATGTACTCCACAGCAGACAATGTCC...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp AAAGTGAGATGTCGTGTGTGTGTGTGCATGTGTCTGTGGGGGAGGCATATTAATTGCGTATATGAAATGTaGAGGTGGGGTATATGTGAA +
Preference number: 4 (lower is better)
Translates to: KVRCRVCVCMCLWGRHINCVYEM*RWGICE
Trigger: TTCACATATACCCCACCTCCACATTTCATATACGCA...ATTAATATGCCTCCCCCACAGACACATGCACACACACACACGACATCTCACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGGGGTATGCAAAGGTATaGGTGTGTCTATCAATACTG +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERGYAKV*VCLSIL
Trigger: CAGTATTGATAGACACACCCATACCTTTGCATACCC...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATGGAGGAAAAGGGGAATaGTATAATTCACTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHGGKGE*YNSLSF
Trigger: GAAGGAGAGTGAATTATACCATTCCCCTTTTCCTCC...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGCACACACTTTCACCATaGTATCTCTGTAATTTCCTC +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERHTLSP*YLCNFL
Trigger: GAGGAAATTACAGAGATATCATGGTGAAAGTGTGTG...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGCACACACTTTCACCATaGTATCTCTGTAATTTCCTC +
Preference number: 4 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEHTLSP*YLCNFL
Trigger: GAGGAAATTACAGAGATATCATGGTGAAAGTGTGTG...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp GACTTGAAGAGACAAGAAGAAGACCAGTTACCAAAGCACAGGAGAGAGTTGGCTTTTGTAAACTTTTACTaGAGCACAGGTCCCCTTATA +
Preference number: 4 (lower is better)
Translates to: DLKRQEEDQLPKHRRELAFVNFY*STGPLI
Trigger: TATAAGGGGACCTGTGCTTCAGTAAAAGTTTACAAA...AGCCAACTCTCTCCTGTGCTTTGGTAACTGGTCTTCTTCTTGTCTCTTCAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTACTGAAAAGGATAAGTTaGTGGGTGCTGAATGTGAAT +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLLKRIS*WVLNVN
Trigger: ATTCACATTCAGCACCCATCAACTTATCCTTTTCAG...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGCTGAAAAGGATAAGTTaGTGGGTGCTGAATGTGAAT +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERLKRIS*WVLNVN
Trigger: ATTCACATTCAGCACCCATCAACTTATCCTTTTCAG...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGTTCATACAATTCAACTaGTACCAAGCCGCTCTGTAT +
Preference number: 4 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEFIQFN*YQAALY
Trigger: ATACAGAGCGGCTTGGTATCAGTTGAATTGTATGAA...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp GTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACTCAGCTGCTTTGGTATCTTaGATGGAGGACATTGTCTGC +
Preference number: 4 (lower is better)
Translates to: VCREVSIRVSMRNIVIYSAALVS*MEDIVC
Trigger: GCAGACAATGTCCTCCATTCAAGATACCAAAGCAGC...TGAGTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCATGGCAGGGATGTGTGTaGTGGGACATACATATTAGC +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSWQGCV*WDIHIS
Trigger: GCTAATATGTATGTCCCATCACACACATCCCTGCCA...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATTATAAACGACAATGGTaGCTTTGTAATGAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHYKRQW*LCNEGN
Trigger: GTTGCCCTCATTACAAAGGCACCATTGTCGTTTATA...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTATATAAACGACAATGGTaGCTTTGTAATGAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLYKRQW*LCNEGN
Trigger: GTTGCCCTCATTACAAAGGCACCATTGTCGTTTATA...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTATCTTGCAGCAATGTCTaGTGCTTTGGTATCTTGAAT +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLSCSNV*CFGILN
Trigger: ATTCAAGATACCAAAGCAGCAGACATTGCTGCAAGA...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp TGTGTCTGTGGGGGAGGCATATTAATGAGTGTATGCGTATATGAAATGTGGAGGTCTTGCAGCAATGTCTaGTGCTTTGGTATCTTGAAT +
Preference number: 4 (lower is better)
Translates to: CVCGGGILMSVCVYEMWRSCSNV*CFGILN
Trigger: ATTCAAGATACCAAAGCAGCAGACATTGCTGCAAGA...CCTCCACATTTCATATACGCATACACTCATTAATATGCCTCCCCCACAGACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTTTAGAAGTGCAGCAGTaGTCCCCAAATGTTCAGTTA +
Preference number: 4 (lower is better)
Translates to: LLSFGIQEKLASINFNRPLEVQQ*SPNVQL
Trigger: TAACTGAACATTTGGGGAGCACTGCTGCACTTCTAA...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTAGCATAAGAAAGGTGTaGAGAGAGGTATCAATCAGG +
Preference number: 4 (lower is better)
Translates to: LLSFGIQEKLASINFNRPSIRKV*REVSIR
Trigger: CCTGATTGATACCTCTCTGCACACCTTTCTTATGCT...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATGTAACGTGCAGTAAATaGAATTGCAATGCCTATTGG +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHVTCSK*NCNAYW
Trigger: CCAATAGGCATTGCAATTCCATTTACTGCACGTTAC...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGGTAACGTGCAGTAAATaGAATTGCAATGCCTATTGG +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERVTCSK*NCNAYW
Trigger: CCAATAGGCATTGCAATTCCATTTACTGCACGTTAC...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCGCTGGGTCAACTGGTTaGATCTTTAACTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFAGSTG*IFNCTS
Trigger: GCTGGTGCAGTTAAAGATCCAACCAGTTGACCCAGC...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCAATGACTATTGTCCATaGTGGAAGAGAGGTGAAGTA +
Preference number: 4 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSNDYCP*WKRGEV
Trigger: TACTTCACCTCTCTTCCACCATGGACAATAGTCATT...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTAAATGACTATTGTCCATaGTGGAAGAGAGGTGAAGTA +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLNDYCP*WKRGEV
Trigger: TACTTCACCTCTCTTCCACCATGGACAATAGTCATT...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGTCCACTTCTTTGATTTaGAGTTCCAGCCTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: AKLKTVMVAKHNHSTREESTSLI*SSSLGF
Trigger: AAAACCTAGGCTGGAACTCCAAATCAAAGAAGTGGA...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTATCCACTTCTTTGATTTaGAGTTCCAGCCTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLSTSLI*SSSLGF
Trigger: AAAACCTAGGCTGGAACTCCAAATCAAAGAAGTGGA...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAAGCAAAGAAACTCGTaGATCTGTTCTGTGAGATCA +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERKQRNS*ICSVRS
Trigger: TGATCTCACAGAACAGATCCACGAGTTTCTTTGCTT...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp AGGTTGGCTCACCAGACAGAGAAATGGGTATGCAAAGGTATGGGTGTGTCTATCAACTCAAGACAGTCATaGTTGCAAAACATAATCACT +
Preference number: 4 (lower is better)
Translates to: RLAHQTEKWVCKGMGVSINSRQS*LQNIIT
Trigger: AGTGATTATGTTTTGCAACCATGACTGTCTTGAGTT...GATAGACACACCCATACCTTTGCATACCCATTTCTCTGTCTGGTGAGCCAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCATATTATTGAGGATGTaGTCATCTCTTCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSILLRM*SSLLLG
Trigger: GCCCAAGAGAAGAGATGACCACATCCTCAATAATAT...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp GACTTGAAGAGACAAGAAGAAGACCAGTTACCAAAGCACAGGAGAGAGTTGGCTGTCTGTGCCAGTAAATaGCTGAAGTGTTATTCTATT +
Preference number: 4 (lower is better)
Translates to: DLKRQEEDQLPKHRRELAVCASK*LKCYSI
Trigger: AATAGAATAACACTTCAGCCATTTACTGGCACAGAC...AGCCAACTCTCTCCTGTGCTTTGGTAACTGGTCTTCTTCTTGTCTCTTCAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp CTTTGCATTAGCAAAAGCGAACAAGGCATCTCTGATGTGGTCCATACAGGTTGGCCACACACAGCAAAATaGATGAATTTCAGCAACATA +
Preference number: 4 (lower is better)
Translates to: LCISKSEQGISDVVHTGWPHTAK*MNFSNI
Trigger: TATGTTGCTGAAATTCATCCATTTTGCTGTGTGTGG...CCAACCTGTATGGACCACATCAGAGATGCCTTGTTCGCTTTTGCTAATGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCTTTGTAAACTTTTACTaGAGCACAGGTCCCCTTATA +
Preference number: 4 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSFVNFY*STGPLI
Trigger: TATAAGGGGACCTGTGCTTCAGTAAAAGTTTACAAA...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATACAAAAGTAACCAAATaGCTATTGTCCATGGTGGAA +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHTKVTK*LLSMVE
Trigger: TTCCACCATGGACAATAGTCATTTGGTTACTTTTGT...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGTACTCTGTGGACGGTTaGTTAATTTCTTATGCTTTG +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERYSVDG*LISYAL
Trigger: CAAAGCATAAGAAATTAATCAACCGTCCACAGAGTA...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATTACTCTGTGGACGGTTaGTTAATTTCTTATGCTTTG +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHYSVDG*LISYAL
Trigger: CAAAGCATAAGAAATTAATCAACCGTCCACAGAGTA...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGGATATCACATATTATTaGGGATGTGGTCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERDITYY*GCGHLF
Trigger: GAAGAGATGACCACATCCTCAATAATATGTGATATC...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCTTTTGTCTCCAAATCTaGTTCAATATTTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSFCLQI*FNIWPS
Trigger: ACTGGGCCAAATATTGAAGCAGATTTGGAGACAAAA...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR GCA 90 bp AAGGTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACTCACCCAAGAGTGCCTaGTTTAGCATCTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: KVCREVSIRVSMRNIVIYSPKSA*FSIWFC
Trigger: ACAAAACCAGATGCTAAAGCAGGCACTCTTGGGTGA...GTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTACATAATCCTTCCCGTTaGTTGAAGCAAATATGTTTC +
Preference number: 4 (lower is better)
Translates to: NIITQPERSAHTQECFLLHNPSR*LKQICF
Trigger: GAAACATATTTGCTTCAAGCAACGGGAAGGATTATG...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp CTTTGCATTAGCAAAAGCGAACAAGGCATCTCTGATGTGGTCCATACAGGTTGGTTATTTTCTCTGCACTaGCTCATTTCGCTAATAACA +
Preference number: 4 (lower is better)
Translates to: LCISKSEQGISDVVHTGWLFSLH*LISLIT
Trigger: TGTTATTAGCGAAATGAGGCAGTGCAGAGAAAATAA...CCAACCTGTATGGACCACATCAGAGATGCCTTGTTCGCTTTTGCTAATGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTAACAGCTATTCTATGTaGATTGTCCTTCTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LLSFGIQEKLASINFNRPNSYSM*IVLLVR
Trigger: TCTCACCAGAAGGACAATCCACATAGAATAGCTGTT...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTCTTTATAAACGACAATaGTGCCTTTGTAATGAGGGC +
Preference number: 4 (lower is better)
Translates to: LLSFGIQEKLASINFNRPLYKRQ*CLCNEG
Trigger: GCCCTCATTACAAAGGCACCATTGTCGTTTATAAAG...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp GTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACTCATTTCTCGAGACACATTaGTTCTCTTTGTCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: VCREVSIRVSMRNIVIYSFLETH*FSLSSS
Trigger: GCTGCTTGACAAAGAGAATCAATGTGTCTCGAGAAA...TGAGTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCGCTTGTGGATTGGACTaGGTAGAAAGTATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFACGLD*VESILL
Trigger: CAGCAAGATACTTTCTACTCAGTCCAATCCACAAGC...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTACAAAAGTAACCAAATaGCTATTGTCCATGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LLSFGIQEKLASINFNRPTKVTK*LLSMVE
Trigger: TTCCACCATGGACAATAGTCATTTGGTTACTTTTGT...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTTACTCTGTGGACGGTTaGTTAATTTCTTATGCTTTG +
Preference number: 4 (lower is better)
Translates to: LLSFGIQEKLASINFNRPYSVDG*LISYAL
Trigger: CAAAGCATAAGAAATTAATCAACCGTCCACAGAGTA...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTGTGCTTTATATTCTCTaGATCATTGGGAAGAGTACT +
Preference number: 4 (lower is better)
Translates to: LLSFGIQEKLASINFNRPVLYIL*IIGKST
Trigger: AGTACTCTTCCCAATGATTCAGAGAATATAAAGCAC...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAGCTACATCAAAACACTaGTGTGGTTCAGTGAACACT +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSATSKH*CGSVNT
Trigger: AGTGTTCACTGAACCACAGCAGTGTTTTGATGTAGC...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATTATAACTCCCTAAAATaGATAAAAGCAAGCTCTACC +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHYNSLK*IKASST
Trigger: GGTAGAGCTTGCTTTTATGCATTTTAGGGAGTTATA...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGTATAACTCCCTAAAATaGATAAAAGCAAGCTCTACC +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERYNSLK*IKASST
Trigger: GGTAGAGCTTGCTTTTATGCATTTTAGGGAGTTATA...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTGGAGTACATTCATCATaGATGCCGCATAAATTACAA +
Preference number: 4 (lower is better)
Translates to: LLSFGIQEKLASINFNRPGVHSS*MPHKLQ
Trigger: TTGTAATTTATGCGGCATGCATGATGAATGTACTCC...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp AAGGTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACCTGTTGTCTGAATTATaGCATGAGTCTCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: KVCREVSIRVSMRNIVIYLLSEL*HESLPC
Trigger: ACAGGGAAGAGACTCATGGCATAATTCAGACAACAG...GTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCCGACCTAATGGTTTTTaGATTAATGAGTCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSRPNGF*INESVK
Trigger: TTTCACTGACTCATTAATGCAAAAACCATTAGGTCG...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATAATTGCAATGCCTATTaGAAATGGAACTCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHNCNAY*KWNSLF
Trigger: GAAAAGAGAGTTCCATTTCCAATAGGCATTGCAATT...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCAATTGCAATGCCTATTaGAAATGGAACTCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSNCNAY*KWNSLF
Trigger: GAAAAGAGAGTTCCATTTCCAATAGGCATTGCAATT...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCACCAAGCCGCTCTGTATaGTTTTCACAACATCATCAA +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSPSRSV*FSQHHQ
Trigger: TTGATGATGTTGTGAAAACCATACAGAGCGGCTTGG...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAGACTATTGTCCATGGTaGAAGAGAGGTGAAGTACAA +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSDYCPW*KRGEVQ
Trigger: TTGTACTTCACCTCTCTTCCACCATGGACAATAGTC...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGATCAAAACACTGCTGTaGTTCAGTGAACACTTTATT +
Preference number: 4 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEIKTLL*FSEHFI
Trigger: AATAAAGTGTTCACTGAACCACAGCAGTGTTTTGAT...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATAACTCAAGACAGTCATaGTTGCAAAACATAATCACT +
Preference number: 4 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHNSRQS*LQNIIT
Trigger: AGTGATTATGTTTTGCAACCATGACTGTCTTGAGTT...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAACTCAAGACAGTCATaGTTGCAAAACATAATCACT +
Preference number: 4 (lower is better)
Translates to: RPNSRQSWLQNIITQPERNSRQS*LQNIIT
Trigger: AGTGATTATGTTTTGCAACCATGACTGTCTTGAGTT...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCACAATGTCTGCTGCTTTaGTATCTTGAATGGAGGACA +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSQCLLL*YLEWRT
Trigger: TGTCCTCCATTCAAGATACCAAAGCAGCAGACATTG...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp AAGGTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACCAATGTCTGCTGCTTTaGTATCTTGAATGGAGGACA +
Preference number: 4 (lower is better)
Translates to: KVCREVSIRVSMRNIVIYQCLLL*YLEWRT
Trigger: TGTCCTCCATTCAAGATACCAAAGCAGCAGACATTG...GTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp GTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACTCACTGAAAAGGATAAGTTaGTGGGTGCTGAATGTGAAT +
Preference number: 4 (lower is better)
Translates to: VCREVSIRVSMRNIVIYSLKRIS*WVLNVN
Trigger: ATTCACATTCAGCACCCATCAACTTATCCTTTTCAG...TGAGTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp AGCCAACGACCTAATGGTTTTTGCATTAATGAGTCAGTGAAACTAGTTCAATGTCACTGTCTTGGCTTCTaGATCCCAGTAATTTCAAAC +
Preference number: 4 (lower is better)
Translates to: SQRPNGFCINESVKLVQCHCLGF*IPVISN
Trigger: GTTTGAAATTACTGGGATTCAGAAGCCAAGACAGTG...ACATTGAACTAGTTTCACTGACTCATTAATGCAAAAACCATTAGGTCGTTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR TCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCATTCTCTTGGGCTTTCTaGAGTCTCTTGAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSFSWAF*SLLNFC
Trigger: ACAGAAATTCAAGAGACTTCAGAAAGCCCAAGAGAA...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCGCTACATCAAAACACTaGTGTGGTTCAGTGAACACT +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFATSKH*CGSVNT
Trigger: AGTGTTCACTGAACCACAGCAGTGTTTTGATGTAGC...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp AGCCAACGACCTAATGGTTTTTGCATTAATGAGTCAGTGAAACTAGTTCAATGTCTATTATCTGATCCGTaGTTCTCCCTTTGTCTCACA +
Preference number: 4 (lower is better)
Translates to: SQRPNGFCINESVKLVQCLLSDP*FSLCLT
Trigger: TGTGAGACAAAGGGAGAAGCACGGATCAGATAATAG...ACATTGAACTAGTTTCACTGACTCATTAATGCAAAAACCATTAGGTCGTTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCATGGAGGACATTGTCTaGTGTGGAGTACATTCATCA +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFMEDIV*CGVHSS
Trigger: TGATGAATGTACTCCACAGCAGACAATGTCCTCCAT...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR GCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCGAGTCTCTTCCCTGTTaGCATTTATGTTCTCAACAG +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFESLPC*HLCSQQ
Trigger: CTGTTGAGAACATAAATGGCAACAGGGAAGAGACTC...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCCCTGGCTTAAATCTTTaGAAGGCACCACTAAAACAG +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFPGLNL*KAPLKQ
Trigger: CTGTTTTAGTGGTGCCTTCCAAAGATTTAAGCCAGG...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCATCCACTTCTTTGATTTaGAGTTCCAGCCTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSSTSLI*SSSLGF
Trigger: AAAACCTAGGCTGGAACTCCAAATCAAAGAAGTGGA...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCACTTTATAAACGACAATaGTGCCTTTGTAATGAGGGC +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSLYKRQ*CLCNEG
Trigger: GCCCTCATTACAAAGGCACCATTGTCGTTTATAAAG...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp AAGGTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACCTTTATAAACGACAATaGTGCCTTTGTAATGAGGGC +
Preference number: 4 (lower is better)
Translates to: KVCREVSIRVSMRNIVIYLYKRQ*CLCNEG
Trigger: GCCCTCATTACAAAGGCACCATTGTCGTTTATAAAG...GTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAAAGCAAAGAAACTCGTaGATCTGTTCTGTGAGATCA +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSKQRNS*ICSVRS
Trigger: TGATCTCACAGAACAGATCCACGAGTTTCTTTGCTT...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCGGACATTGTCTGCTGTaGAGTACATTCATCATGCAT +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFGHCLL*STFIMH
Trigger: ATGCATGATGAATGTACTCCACAGCAGACAATGTCC...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCATTTGTAAACTTTTACTaGAGCACAGGTCCCCTTATA +
Preference number: 4 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSFVNFY*STGPLI
Trigger: TATAAGGGGACCTGTGCTTCAGTAAAAGTTTACAAA...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCTTCATACAATTCAACTaGTACCAAGCCGCTCTGTAT +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFFIQFN*YQAALY
Trigger: ATACAGAGCGGCTTGGTATCAGTTGAATTGTATGAA...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCTTTTGGGCTCACACTTaGAGTCACAGAAAACTAGTT +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFFWAHT*SHRKLV
Trigger: AACTAGTTTTCTGTGACTTCAAGTGTGAGCCCAAAA...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp AGCCAACGACCTAATGGTTTTTGCATTAATGAGTCAGTGAAACTAGTTCAATGTAATGTATCTGTGTTGTaGAGAGGTGTGTATATGTGG +
Preference number: 4 (lower is better)
Translates to: SQRPNGFCINESVKLVQCNVSVL*RGVYMW
Trigger: CCACATATACACACCTCTTCACAACACAGATACATT...ACATTGAACTAGTTTCACTGACTCATTAATGCAAAAACCATTAGGTCGTTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCGTAACGTGCAGTAAATaGAATTGCAATGCCTATTGG +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFVTCSK*NCNAYW
Trigger: CCAATAGGCATTGCAATTCCATTTACTGCACGTTAC...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCACAAAAGTAACCAAATaGCTATTGTCCATGGTGGAA +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFTKVTK*LLSMVE
Trigger: TTCCACCATGGACAATAGTCATTTGGTTACTTTTGT...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR TCA 90 bp AGCCAACGACCTAATGGTTTTTGCATTAATGAGTCAGTGAAACTAGTTCAATGTGTGCTTTATATTCTCTaGATCATTGGGAAGAGTACT +
Preference number: 4 (lower is better)
Translates to: SQRPNGFCINESVKLVQCVLYIL*IIGKST
Trigger: AGTACTCTTCCCAATGATTCAGAGAATATAAAGCAC...ACATTGAACTAGTTTCACTGACTCATTAATGCAAAAACCATTAGGTCGTTGGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR GCA 90 bp AGCCAACGACCTAATGGTTTTTGCATTAATGAGTCAGTGAAACTAGTTCAATGTCATAATCCTTCCCGTTaGTTGAAGCAAATATGTTTC +
Preference number: 4 (lower is better)
Translates to: SQRPNGFCINESVKLVQCHNPSR*LKQICF
Trigger: GAAACATATTTGCTTCAAGCAACGGGAAGGATTATG...ACATTGAACTAGTTTCACTGACTCATTAATGCAAAAACCATTAGGTCGTTGGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp GTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACTCAATCAAAACACTGCTGTaGTTCAGTGAACACTTTATT +
Preference number: 4 (lower is better)
Translates to: VCREVSIRVSMRNIVIYSIKTLL*FSEHFI
Trigger: AATAAAGTGTTCACTGAACCACAGCAGTGTTTTGAT...TGAGTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CCA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCATCAAAACACTGCTGTaGTTCAGTGAACACTTTATT +
Preference number: 4 (lower is better)
Translates to: HYKTLVSITSYHSPGISFIKTLL*FSEHFI
Trigger: AATAAAGTGTTCACTGAACCACAGCAGTGTTTTGAT...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS CCA 90 bp CCCCCAGTGCTCAGCTGGACCATGCAGCCCTCCACACTCCTTCTGTaGGCACGGCAGCTTCTCCCCATGCATCTATCACCACGTAGCATG +
Preference number: 5 (lower is better)
Translates to: PPVLSWTMQPSTLLL*ARQLLPMHLSPRSM
Trigger: CATGCTACGTGGTGATAGATGCATGGGGAGAAGCTGCCGTGCCCACAGAAGGAGTGTGGAGGGCTGCATGGTCCAGCTGAGCACTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS GCA 90 bp CTGTGGTTTCCACAGGTTCGCACAGCTGCTGCCCTACTGCTGCTCTaGTGGATCCCACCAGCAGTGATCCCACTGCACCTGCTTTATATG +
Preference number: 5 (lower is better)
Translates to: LWFPQVRTAAALLLL*WIPPAVIPLHLLYM
Trigger: CATATAAAGCAGGTGCAGTGGGATCACTGCTGGTGGGATCCAGCAGAGCAGCAGTAGGGCAGCAGCTGTGCGAACCTGTGGAAACCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS GCA 90 bp GTTTCATGGGCTTTACTCTCTTGGCATCCACACTGTTCCACTAGGTaGCCCCCAGTGCTCAGCTGGACCATGCAGCCCTCCACACTCCTT +
Preference number: 5 (lower is better)
Translates to: VSWALLSWHPHCSTR*PPVLSWTMQPSTLL
Trigger: AAGGAGTGTGGAGGGCTGCATGGTCCAGCTGAGCACTGGGGGGCACCTAGTGGAACAGTGTGGATGCCAAGAGAGTAAAGCCCATGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS CCA 90 bp TGGTTTCCACAGGTTCGCACAGCTGCTGCCCTACTGCTGCTCTGCTaGATCCCACCAGCAGTGATCCCACTGCACCTGCTTTATATGGAG +
Preference number: 5 (lower is better)
Translates to: WFPQVRTAAALLLLC*IPPAVIPLHLLYME
Trigger: CTCCATATAAAGCAGGTGCAGTGGGATCACTGCTGGTGGGATCCAGCAGAGCAGCAGTAGGGCAGCAGCTGTGCGAACCTGTGGAAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS-3UTR CAA 90 bp TGCAGGAGGGGTGTGTTTGTGACAGCATATGTGAGGTGCACAAGTGGACCCGAACTAGAGGTGGCCTTCTaGAGAGGAGCAGTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: CRRGVFVTAYVRCTSGPELEVAF*RGAVVA
Trigger: TGCAACCACTGCTCCTCTCAAGAAGGCCACCTCTAG...TTCGGGTCCACTTGTGCACCTCACATATGCTGTCACAAACACACCCCTCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS GCA 90 bp TGTGGGCACGGCAGCTTCTCCCCATGCATCTATCACCACGTAGCATaGCATGATGGTTTCTACCTGTCCTTTAGTTTTCCTCTCATGGTG +
Preference number: 5 (lower is better)
Translates to: CGHGSFSPCIYHHVA*HDGFYLSFSFPLMV
Trigger: CACCATGAGAGGAAAACTAAAGGACAGGTAGAAACCATCATGGCATGCTACGTGGTGATAGATGCATGGGGAGAAGCTGCCGTGCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS-3UTR CAA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCGCCAGGAGGCGAAGTTaGTCGGTGAAAGTTGGAAGC +
Preference number: 5 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFARRRS*SVKVGS
Trigger: GCTTCCAACTTTCACCGACAAACTTCGCCTCCTGGC...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS TCA 90 bp TACCTGTCCTTTAGTTTTCCTCTCATGGTGCCATATAGGTCCAGATaGCATCTGTGGTTTCCACAGGTTCGCACAGCTGCTGCCCTACTG +
Preference number: 5 (lower is better)
Translates to: YLSFSFPLMVPYRSR*HLWFPQVRTAAALL
Trigger: CAGTAGGGCAGCAGCTGTGCGAACCTGTGGAAACCACAGATGTCATCTGGACCTATATGGCACCATGAGAGGAAAACTAAAGGACAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS-3UTR CAA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGTCACTCCTGCCAATCTaGCGGAGATGTCGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: RPNSRQSWLQNIITQPERSLLPI*RRCRAR
Trigger: CCTGGCTCGACATCTCCGCAAGATTGGCAGGAGTGA...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACACTGGAAGCCCCTGCTTaGAGTTGTCCTACCTTTCCA +
Preference number: 5 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTLEAPA*SCPTFP
Trigger: TGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAG...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp TGCAGGAGGGGTGTGTTTGTGACAGCATATGTGAGGTGCACAAGTGGACCCGAACTTGAATGGAGGACATaGTCTGCTGTGGAGTACATT +
Preference number: 5 (lower is better)
Translates to: CRRGVFVTAYVRCTSGPELEWRT*SAVEYI
Trigger: AATGTACTCCACAGCAGACAATGTCCTCCATTCAAG...TTCGGGTCCACTTGTGCACCTCACATATGCTGTCACAAACACACCCCTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CAA 90 bp GTGAGGTGCACAAGTGGACCCGAAACAGTGCTGATAAAGGGTAGGCCTGTGTGTTGGTCATCTCTTCTCTaGGGCTTTCTGAAGTCTCTT +
Preference number: 5 (lower is better)
Translates to: VRCTSGPETVLIKGRPVCWSSLL*GFLKSL
Trigger: AAGAGACTTCAGAAAGCCCAAGAGAAGAGATGACCA...ACACACAGGCCTACCCTTTATCAGCACTGTTTCGGGTCCACTTGTGCACCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS TCA 90 bp TGGATCTGTTCTGTGAGATCATCAGGGTTCTTGAGTTTGATGAGCTaGATGGTGCTACGGCGCAGAGGGAGAGTTGAGGAAAGAGACTCA +
Preference number: 5 (lower is better)
Translates to: WICSVRSSGFLSLMS*MVLRRRGRVEERDS
Trigger: TGAGTCTCTTTCCTCAACTCTCCCTCTGCGCCGTAGCACCATTCAGCTCATCAAACTCAAGAACCCTGATGATCTCACAGAACAGATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000503528.1
ENST00000507598.5
ENST00000639862.2
CDS CCA 90 bp GAAAGAGACTCAGCATTTTCTTCTGAGAGCTCCTCAGCCAGCCAATaGAGCAAGTTATCCCAAAGGGCTTCTCACAGGAATCACGCAGAT +
Preference number: 5 (lower is better)
Translates to: ERDSAFSSESSSASQ*SKLSQRASHRNHAD
Trigger: ATCTGCGTGATTCCTGTGAGAAGCCCTTTGGGATAACTTGCTCCATTGGCTGGCTGAGGAGCTCTCAGAAGAAAATGCTGAGTCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS-3UTR CAA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGGCCAGGAGGCGAAGTTaGTCGGTGAAAGTTGGAAGC +
Preference number: 5 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEARRRS*SVKVGS
Trigger: GCTTCCAACTTTCACCGACAAACTTCGCCTCCTGGC...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTTCACTCCTGCCAATCTaGCGGAGATGTCGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LLSFGIQEKLASINFNRPSLLPI*RRCRAR
Trigger: CCTGGCTCGACATCTCCGCAAGATTGGCAGGAGTGA...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGCCCCTGCTTTGAGTaGTCCTACCTTTCCAGATTG +
Preference number: 5 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFSPCFE*SYLSRL
Trigger: CAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCT...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS CCA 90 bp GCCCCCTCACAAAGGTCATCACCCAAGAGTGCCTGCTTTAGCATCTaGTTTTGTCTCCAAATCTGCTTCAATATTTGGCCCAGTTTACCT +
Preference number: 5 (lower is better)
Translates to: APSQRSSPKSACFSI*FCLQICFNIWPSLP
Trigger: AGGTAAACTGGGCCAAATATTGAAGCAGATTTGGAGACAAAACCAGATGCTAAAGCAGGCACTCTTGGGTGATGACCTTTGTGAGGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR CAA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACATGTGAATCAGAGGGCTaGTGGATTGGACTGAGTAGA +
Preference number: 5 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTCESEG*WIGLSR
Trigger: TCTACTCAGTCCAATCCACAAGCCCTCTGATTCACA...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCTTCTCCTTCTCGAACTaGGAAATGACGAGATGGCTC +
Preference number: 5 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFFSFSN*EMTRWL
Trigger: GAGCCATCTCGTCATTTCCAAGTTCGAGAAGGAGAA...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGCTGGAAGCCCCTGCTTaGAGTTGTCCTACCTTTCCA +
Preference number: 5 (lower is better)
Translates to: RPNSRQSWLQNIITQPERLEAPA*SCPTFP
Trigger: TGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAG...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGAAGCACAGGAGAGAGTaGGCTAGAGGTGGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEKHRRE*ARGGLL
Trigger: AAGAAGGCCACCTCTAGCCAACTCTCTCCTGTGCTT...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS GCA 90 bp CATGCCATGATGGTTTCTACCTGTCCTTTAGTTTTCCTCTCATGGTaGCATATAGGTCCAGATGACATCTGTGGTTTCCACAGGTTCGCA +
Preference number: 5 (lower is better)
Translates to: HAMMVSTCPLVFLSW*HIGPDDICGFHRFA
Trigger: TGCGAACCTGTGGAAACCACAGATGTCATCTGGACCTATATGGCACCATGAGAGGAAAACTAAAGGACAGGTAGAAACCATCATGGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS CCA 90 bp GAAAGAGACTCAGCATTTTCTTCTGAGAGCTCCTCAGCCAGCCAATaGAGCAAGTTATCCCAAAGGGCTTCTACAGGATCCTTAGAAACT +
Preference number: 5 (lower is better)
Translates to: ERDSAFSSESSSASQ*SKLSQRASTGSLET
Trigger: AGTTTCTAAGGATCCTGTAGAAGCCCTTTGGGATAACTTGCTCCATTGGCTGGCTGAGGAGCTCTCAGAAGAAAATGCTGAGTCTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS-3UTR CAA 90 bp GTGTGTCTATCAATACTGAGGGTGTTCAGGGGCAGGTCTCAATCCAAGTGGCACTTTTCTCGAGACACATaGATTCTCTTTGTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: VCLSILRVFRGRSQSKWHFSRDT*ILFVKQ
Trigger: CTGCTTGACAAAGAGAATCAATGTGTCTCGAGAAAA...GTGCCACTTGGATTGAGACCTGCCCCTGAACACCCTCAGTATTGATAGACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CAA 90 bp TGCAGGAGGGGTGTGTTTGTGACAGCATATGTGAGGTGCACAAGTGGACCCGAAATCTCAGAACCAAGGTaGTTTTTATCAAGGTATGGA +
Preference number: 5 (lower is better)
Translates to: CRRGVFVTAYVRCTSGPEISEPR*FLSRYG
Trigger: TCCATACCTTGATAAAAACAACCTTGGTTCTGAGAT...TTCGGGTCCACTTGTGCACCTCACATATGCTGTCACAAACACACCCCTCCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CAA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACAGTCCACTTCTTTGATTaGGAGTTCCAGCCTAGGTTT +
Preference number: 5 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTVHFFD*EFQPRF
Trigger: AAACCTAGGCTGGAACTCCAAATCAAAGAAGTGGAC...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp GTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACTCATCACTCCTGCCAATCTaGCGGAGATGTCGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: VCREVSIRVSMRNIVIYSSLLPI*RRCRAR
Trigger: CCTGGCTCGACATCTCCGCAAGATTGGCAGGAGTGA...TGAGTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CAA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACATCCTACCTTTCCAGATaGAGCCAATGTACACCTTAC +
Preference number: 5 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTSYLSR*SQCTPY
Trigger: GTAAGGTGTACATTGGCTCAATCTGGAAAGGTAGGA...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCTGCTGCTTTGGTATCTaGAATGGAGGACATTGTCTG +
Preference number: 5 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFCCFGI*NGGHCL
Trigger: CAGACAATGTCCTCCATTCAAGATACCAAAGCAGCA...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS GCA 90 bp CACAGGAATCACGCAGATGACCTAGCTCTGGGGCCCATCATCTCATaGAGAAATTTCAGTTTCTGGCAAAGTTTTCTCAAGTATTTCTGG +
Preference number: 5 (lower is better)
Translates to: HRNHADDLALGPIIS*RNFSFWQSFLKYFW
Trigger: CCAGAAATACTTGAGAAAACTTTGCCAGAAACTGAAATTTCTGCATGAGATGATGGGCCCCAGAGCTAGGTCATCTGCGTGATTCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS CCA 90 bp TTTCAGTTTCTGGCAAAGTTTTCTCAAGTATTTCTGGCAGTTTCATaGGCTTTACTCTCTTGGCATCCACACTGTTCCACTAGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: FQFLAKFSQVFLAVS*ALLSWHPHCSTRCP
Trigger: GGGGCACCTAGTGGAACAGTGTGGATGCCAAGAGAGTAAAGCCCATGAAACTGCCAGAAATACTTGAGAAAACTTTGCCAGAAACTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS-3UTR CAA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACAACCTGGCTTAAATCTTaGGAAGGCACCACTAAAACA +
Preference number: 5 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTTWLKS*EGTTKT
Trigger: TGTTTTAGTGGTGCCTTCCAAAGATTTAAGCCAGGT...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGTTCTCCTTCTCGAACTaGGAAATGACGAGATGGCTC +
Preference number: 5 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEFSFSN*EMTRWL
Trigger: GAGCCATCTCGTCATTTCCAAGTTCGAGAAGGAGAA...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAGCCAGGAGGCGAAGTTaGTCGGTGAAAGTTGGAAGC +
Preference number: 5 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSARRRS*SVKVGS
Trigger: GCTTCCAACTTTCACCGACAAACTTCGCCTCCTGGC...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp GACTTGAAGAGACAAGAAGAAGACCAGTTACCAAAGCACAGGAGAGAGTTGGCTTCCTACCTTTCCAGATaGAGCCAATGTACACCTTAC +
Preference number: 5 (lower is better)
Translates to: DLKRQEEDQLPKHRRELASYLSR*SQCTPY
Trigger: GTAAGGTGTACATTGGCTCAATCTGGAAAGGTAGGA...AGCCAACTCTCTCCTGTGCTTTGGTAACTGGTCTTCTTCTTGTCTCTTCAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CAA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGCATTTAGTTCCCCTCTaGCAGCAATGTCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEHLVPL*QQCLLL
Trigger: AAGCAGCAGACATTGCTGCAAGAGGGGAACTAAATG...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp GTGTGTCTATCAATACTGAGGGTGTTCAGGGGCAGGTCTCAATCCAAGTGGCACTTTATGGGACTATGTTaGAAAATGGGAATCGCCTTT +
Preference number: 5 (lower is better)
Translates to: VCLSILRVFRGRSQSKWHFMGLC*KMGIAF
Trigger: AAAGGCGATTCCCATTTTCAAACATAGTCCCATAAA...GTGCCACTTGGATTGAGACCTGCCCCTGAACACCCTCAGTATTGATAGACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CAA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCTTACCACCCTTAGACTaGAAGAGACAAGAAGAAGAC +
Preference number: 5 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFLPPLD*KRQEED
Trigger: GTCTTCTTCTTGTCTCTTCAAGTCTAAGGGTGGTAA...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS TCA 90 bp ACATTTAGTTCCCCTCTTGCAGCAATGTCTGCTGCTTTGGTATCTTaGATGGAGGACATTGTCTGCTGTGGAGTACATTCATCATGCATG +
Preference number: 5 (lower is better)
Translates to: TFSSPLAAMSAALVS*MEDIVCCGVHSSCM
Trigger: CATGCATGATGAATGTACTCCACAGCAGACAATGTCCTCCATTCAAGATACCAAAGCAGCAGACATTGCTGCAAGAGGGGAACTAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS GCA 90 bp TCACCCAAGAGTGCCTGCTTTAGCATCTGGTTTTGTCTCCAAATCTaGTTCAATATTTGGCCCAGTTTACCTGAGCCCATGTATTCCATA +
Preference number: 5 (lower is better)
Translates to: SPKSACFSIWFCLQI*FNIWPSLPEPMYSI
Trigger: TATGGAATACATGGGCTCAGGTAAACTGGGCCAAATATTGAAGCAGATTTGGAGACAAAACCAGATGCTAAAGCAGGCACTCTTGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS CCA 90 bp TCTCCAAATGTTCATACAATTCAACTGATACCAAGCCGCTCTGTATaGTTTTCACAACATCATCAAGCCCACACCAACCACTGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: SPNVHTIQLIPSRSV*FSQHHQAHTNHCLG
Trigger: GCCAAGACAGTGGTTGGTGTGGGCTTGATGATGTTGTGAAAACCATACAGAGCGGCTTGGTATCAGTTGAATTGTATGAACATTTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS-3UTR CAA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCTCTGAAAAGGATAAGTaGATGGGTGCTGAATGTGAA +
Preference number: 5 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFSEKDK*MGAECE
Trigger: TTCACATTCAGCACCCATCAACTTATCCTTTTCAGA...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCGCAATTTTTGTCCGGTaGAAATACGAAGGTGTAATC +
Preference number: 5 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFAIFVR*KYEGVI
Trigger: GATTACACCTTCGTATTTCAACCGGACAAAAATTGC...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp TCTGGAAGCCCCTGCTTTGAGTTGTCCTACCTTTCCAGATTGAGCCAATGTACATTTTCCCACTTGAATTaGAGCTCTTCTGCAAGATCA +
Preference number: 5 (lower is better)
Translates to: SGSPCFELSYLSRLSQCTFSHLN*SSSARS
Trigger: TGATCTTGCAGAAGAGCTCAAATTCAAGTGGGAAAA...TGTACATTGGCTCAATCTGGAAAGGTAGGACAACTCAAAGCAGGGGCTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp CTTTGCATTAGCAAAAGCGAACAAGGCATCTCTGATGTGGTCCATACAGGTTGGCTGTCTCAGATATTTTaGGGCTCACACTTGAAGTCA +
Preference number: 5 (lower is better)
Translates to: LCISKSEQGISDVVHTGWLSQIF*GSHLKS
Trigger: TGACTTCAAGTGTGAGCCCAAAAATATCTGAGACAG...CCAACCTGTATGGACCACATCAGAGATGCCTTGTTCGCTTTTGCTAATGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CAA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCATACCCTCCTCTCTTTaGGAATTCAGGAAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSIPSSL*EFRKSW
Trigger: CCAGCTTTTCCTGAATTCCAAAAGAGAGGAGGGTAT...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTCATTTAGTTCCCCTCTaGCAGCAATGTCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: LLSFGIQEKLASINFNRPHLVPL*QQCLLL
Trigger: AAGCAGCAGACATTGCTGCAAGAGGGGAACTAAATG...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCCTAACTGGACCTGGTTaGTGTAATGACTTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSLTGPG*CNDFPL
Trigger: GAGAGGAAAGTCATTACACAAACCAGGTCCAGTTAG...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGTGGTCATCTCTTCTCTaGGGCTTTCTGAAGTCTCTT +
Preference number: 5 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEWSSLL*GFLKSL
Trigger: AAGAGACTTCAGAAAGCCCAAGAGAAGAGATGACCA...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp AGGTTGGCTCACCAGACAGAGAAATGGGTATGCAAAGGTATGGGTGTGTCTATCTGGTATCTATGTAACTaGAATTGGTTGCCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: RLAHQTEKWVCKGMGVSIWYLCN*NWLPES
Trigger: TGACTCAGGCAACCAATTCAAGTTACATAGATACCA...GATAGACACACCCATACCTTTGCATACCCATTTCTCTGTCTGGTGAGCCAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CAA 90 bp GACTTGAAGAGACAAGAAGAAGACCAGTTACCAAAGCACAGGAGAGAGTTGGCTAATGAGAATGAACCATaGCCACACACAGCAAAATGG +
Preference number: 5 (lower is better)
Translates to: DLKRQEEDQLPKHRRELANENEP*PHTAKW
Trigger: CCATTTTGCTGTGTGTGGCAATGGTTCATTCTCATT...AGCCAACTCTCTCCTGTGCTTTGGTAACTGGTCTTCTTCTTGTCTCTTCAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CAA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCAATATAACAAGACACTaGGGGGCCAGTAACATCACT +
Preference number: 5 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSNITRH*GASNIT
Trigger: AGTGATGTTACTGGCCCCCAAGTGTCTTGTTATATT...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGACCTGGCTTAAATCTTaGGAAGGCACCACTAAAACA +
Preference number: 5 (lower is better)
Translates to: RPNSRQSWLQNIITQPERTWLKS*EGTTKT
Trigger: TGTTTTAGTGGTGCCTTCCAAAGATTTAAGCCAGGT...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATACCTGGCTTAAATCTTaGGAAGGCACCACTAAAACA +
Preference number: 5 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHTWLKS*EGTTKT
Trigger: TGTTTTAGTGGTGCCTTCCAAAGATTTAAGCCAGGT...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp GAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCAGGAAAAGCAATCCTTCCCGTTGCTaGAAGCAAATATGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: EVGHDSIIPSSLLEFRKSNPSRC*KQICFQ
Trigger: CTGGAAACATATTTGCTTCAAGCAACGGGAAGGATT...GCTTTTCCTGAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATAATCCTTCCCGTTGCTaGAAGCAAATATGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHNPSRC*KQICFQ
Trigger: CTGGAAACATATTTGCTTCAAGCAACGGGAAGGATT...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGAATCCTTCCCGTTGCTaGAAGCAAATATGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: AKLKTVMVAKHNHSTREENPSRC*KQICFQ
Trigger: CTGGAAACATATTTGCTTCAAGCAACGGGAAGGATT...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTGTCCACTTCTTTGATTaGGAGTTCCAGCCTAGGTTT +
Preference number: 5 (lower is better)
Translates to: LLSFGIQEKLASINFNRPVHFFD*EFQPRF
Trigger: AAACCTAGGCTGGAACTCCAAATCAAAGAAGTGGAC...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGAATTCGTCCACTTCTTaGATTTGGAGTTCCAGCCTA +
Preference number: 5 (lower is better)
Translates to: AKLKTVMVAKHNHSTREENSSTS*IWSSSL
Trigger: TAGGCTGGAACTCCAAATCAAAGAAGTGGACGAATT...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTAAATTCGTCCACTTCTTaGATTTGGAGTTCCAGCCTA +
Preference number: 5 (lower is better)
Translates to: NIITQPERSAHTQECFLLNSSTS*IWSSSL
Trigger: TAGGCTGGAACTCCAAATCAAAGAAGTGGACGAATT...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp TGGGAAGGGGAGGTTGGACATGACTCCATAATACCCTCCTCTCTTTTGGAATTCACTTTATTTTCCCACTaGAATTTGAGCTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: WEGEVGHDSIIPSSLLEFTLFSH*NLSSSA
Trigger: TGCAGAAGAGCTCAAATTCAAGTGGGAAAATAAAGT...GAATTCCAAAAGAGAGGAGGGTATTATGGAGTCATGTCCAACCTCCCCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp AAAGTGAGATGTCGTGTGTGTGTGTGCATGTGTCTGTGGGGGAGGCATATTAATTTTTTGGGCTCACACTaGAAGTCACAGAAAACTAGT +
Preference number: 5 (lower is better)
Translates to: KVRCRVCVCMCLWGRHINFLGSH*KSQKTS
Trigger: ACTAGTTTTCTGTGACTTCAAGTGTGAGCCCAAAAA...ATTAATATGCCTCCCCCACAGACACATGCACACACACACACGACATCTCACTTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CAA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTTCCTACCTTTCCAGATaGAGCCAATGTACACCTTAC +
Preference number: 5 (lower is better)
Translates to: LLSFGIQEKLASINFNRPSYLSR*SQCTPY
Trigger: GTAAGGTGTACATTGGCTCAATCTGGAAAGGTAGGA...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTCTTGAATGGAGGACATaGTCTGCTGTGGAGTACATT +
Preference number: 5 (lower is better)
Translates to: LLSFGIQEKLASINFNRPLEWRT*SAVEYI
Trigger: AATGTACTCCACAGCAGACAATGTCCTCCATTCAAG...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTCTAACTGGACCTGGTTaGTGTAATGACTTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: LLSFGIQEKLASINFNRPLTGPG*CNDFPL
Trigger: GAGAGGAAAGTCATTACACAAACCAGGTCCAGTTAG...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS CCA 90 bp CGTTGCTCGAAAGATTTCTCATCGGTTGTTGGGCCAGGTGCTCTCTaGCTGCTTCTAAATCAAGTAATCTTTAGCTTTTCTTTCTCTATT +
Preference number: 5 (lower is better)
Translates to: RCSKDFSSVVGPGAL*LLLNQVIFSFSFSI
Trigger: AATAGAGAAAGAAAAGCTAAAGATTACTTGATTTAGAAGCAGCCAGAGAGCACCTGGCCCAACAACCGATGAGAAATCTTTCGAGCAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506008.1
CDS-3UTR CAA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTATTTTCTCGAGACACATaGATTCTCTTTGTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: NIITQPERSAHTQECFLLFSRDT*ILFVKQ
Trigger: CTGCTTGACAAAGAGAATCAATGTGTCTCGAGAAAA...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS-3UTR CAA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTAATATAACAAGACACTaGGGGGCCAGTAACATCACT +
Preference number: 5 (lower is better)
Translates to: LLSFGIQEKLASINFNRPNITRH*GASNIT
Trigger: AGTGATGTTACTGGCCCCCAAGTGTCTTGTTATATT...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCATGTGAATCAGAGGGCTaGTGGATTGGACTGAGTAGA +
Preference number: 5 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSCESEG*WIGLSR
Trigger: TCTACTCAGTCCAATCCACAAGCCCTCTGATTCACA...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp GTGTGCAGAGAGGTATCAATCAGGGTCTCAATGAGAAATATAGTGATATACTCATGTGAATCAGAGGGCTaGTGGATTGGACTGAGTAGA +
Preference number: 5 (lower is better)
Translates to: VCREVSIRVSMRNIVIYSCESEG*WIGLSR
Trigger: TCTACTCAGTCCAATCCACAAGCCCTCTGATTCACA...TGAGTATATCACTATATTTCTCATTGAGACCCTGATTGATACCTCTCTGCACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CAA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGTCTGAAAAGGATAAGTaGATGGGTGCTGAATGTGAA +
Preference number: 5 (lower is better)
Translates to: RPNSRQSWLQNIITQPERSEKDK*MGAECE
Trigger: TTCACATTCAGCACCCATCAACTTATCCTTTTCAGA...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGTCTGAAAAGGATAAGTaGATGGGTGCTGAATGTGAA +
Preference number: 5 (lower is better)
Translates to: AKLKTVMVAKHNHSTREESEKDK*MGAECE
Trigger: TTCACATTCAGCACCCATCAACTTATCCTTTTCAGA...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp AACATAATCACTCAACCAGAGAGGAGCGCTCACACCCAGGAATGCTTTCTATTAGCAATTTTTGTCCGGTaGAAATACGAAGGTGTAATC +
Preference number: 5 (lower is better)
Translates to: NIITQPERSAHTQECFLLAIFVR*KYEGVI
Trigger: GATTACACCTTCGTATTTCAACCGGACAAAAATTGC...TAATAGAAAGCATTCCTGGGTGTGAGCGCTCCTCTCTGGTTGAGTGATTATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTAATTCGTCCACTTCTTaGATTTGGAGTTCCAGCCTA +
Preference number: 5 (lower is better)
Translates to: LLSFGIQEKLASINFNRPNSSTS*IWSSSL
Trigger: TAGGCTGGAACTCCAAATCAAAGAAGTGGACGAATT...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGTTTTCCCACTTGAATTaGAGCTCTTCTGCAAGATCA +
Preference number: 5 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEFSHLN*SSSARS
Trigger: TGATCTTGCAGAAGAGCTCAAATTCAAGTGGGAAAA...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp AAAGTGAGATGTCGTGTGTGTGTGTGCATGTGTCTGTGGGGGAGGCATATTAATTCAAGACAGTCATGGTaGCAAAACATAATCACTCAA +
Preference number: 5 (lower is better)
Translates to: KVRCRVCVCMCLWGRHINSRQSW*QNIITQ
Trigger: TTGAGTGATTATGTTTTGCAACCATGACTGTCTTGA...ATTAATATGCCTCCCCCACAGACACATGCACACACACACACGACATCTCACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CAA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGTTTTTGGGCTCACACTaGAAGTCACAGAAAACTAGT +
Preference number: 5 (lower is better)
Translates to: RPNSRQSWLQNIITQPERFLGSH*KSQKTS
Trigger: ACTAGTTTTCTGTGACTTCAAGTGTGAGCCCAAAAA...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGTTTTTGGGCTCACACTaGAAGTCACAGAAAACTAGT +
Preference number: 5 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEFLGSH*KSQKTS
Trigger: ACTAGTTTTCTGTGACTTCAAGTGTGAGCCCAAAAA...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTCTGTCTCAGATATTTTaGGGCTCACACTTGAAGTCA +
Preference number: 5 (lower is better)
Translates to: LLSFGIQEKLASINFNRPLSQIF*GSHLKS
Trigger: TGACTTCAAGTGTGAGCCCAAAAATATCTGAGACAG...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp CTTTGCATTAGCAAAAGCGAACAAGGCATCTCTGATGTGGTCCATACAGGTTGGTGTAACTTGAATTGGTaGCCTGAGTCAACCAAAAAT +
Preference number: 5 (lower is better)
Translates to: LCISKSEQGISDVVHTGWCNLNW*PESTKN
Trigger: ATTTTTGGTTGACTCAGGCAACCAATTCAAGTTACA...CCAACCTGTATGGACCACATCAGAGATGCCTTGTTCGCTTTTGCTAATGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS TCA 90 bp GAGGTGAAGTACAATAAACCTCTCCAAATGTTCATACAATTCAACTaGTACCAAGCCGCTCTGTATGGTTTTCACAACATCATCAAGCCC +
Preference number: 5 (lower is better)
Translates to: EVKYNKPLQMFIQFN*YQAALYGFHNIIKP
Trigger: GGGCTTGATGATGTTGTGAAAACCATACAGAGCGGCTTGGTATCAGTTGAATTGTATGAACATTTGGAGAGGTTTATTGTACTTCACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CCA 90 bp GAAAAGGATAAGTTGATGGGTGCTGAATGTGAATCAGAGGGCTTGTaGATTGGACTGAGTAGAAAGTATCTTGCTGTGCTTTTAAATGTG +
Preference number: 5 (lower is better)
Translates to: EKDKLMGAECESEGL*IGLSRKYLAVLLNV
Trigger: CACATTTAAAAGCACAGCAAGATACTTTCTACTCAGTCCAATCCACAAGCCCTCTGATTCACATTCAGCACCCATCAACTTATCCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CCA 90 bp TCATGCAGAAATTTCAGTTTCTGGCAAAGTTTTCTCAAGTATTTCTaGCAGTTTCATGGGCTTTACTCTCTTGGCATCCACACTGTTCCA +
Preference number: 5 (lower is better)
Translates to: SCRNFSFWQSFLKYF*QFHGLYSLGIHTVP
Trigger: TGGAACAGTGTGGATGCCAAGAGAGTAAAGCCCATGAAACTGCCAGAAATACTTGAGAAAACTTTGCCAGAAACTGAAATTTCTGCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS-3UTR CAA 90 bp ACACCCAGGAATGCTTTCTATTATCTGATCCGTGCTTCTCCCTTTGTCTCACATGAATTGCAATGCCTATaGGAAATGGAACTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: TPRNAFYYLIRASPFVSHELQCL*EMELSF
Trigger: AAAAGAGAGTTCCATTTCCAATAGGCATTGCAATTC...ATGTGAGACAAAGGGAGAAGCACGGATCAGATAATAGAAAGCATTCCTGGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGTTGGGTTTAGGTAACTaGATTGAAGGTTTATGTCAC +
Preference number: 5 (lower is better)
Translates to: AKLKTVMVAKHNHSTREELGLGN*IEGLCH
Trigger: GTGACATAAACCTTCAATCAAGTTACCTAAACCCAA...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp AGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGTTGGGTTTAGGTAACTaGATTGAAGGTTTATGTCAC +
Preference number: 5 (lower is better)
Translates to: RPNSRQSWLQNIITQPERLGLGN*IEGLCH
Trigger: GTGACATAAACCTTCAATCAAGTTACCTAAACCCAA...CCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp TGTGTCTGTGGGGGAGGCATATTAATGAGTGTATGCGTATATGAAATGTGGAGGTTGGGTTTAGGTAACTaGATTGAAGGTTTATGTCAC +
Preference number: 5 (lower is better)
Translates to: CVCGGGILMSVCVYEMWRLGLGN*IEGLCH
Trigger: GTGACATAAACCTTCAATCAAGTTACCTAAACCCAA...CCTCCACATTTCATATACGCATACACTCATTAATATGCCTCCCCCACAGACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CAA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGATCTCAGAACCAAGGTaGTTTTTATCAAGGTATGGA +
Preference number: 5 (lower is better)
Translates to: AKLKTVMVAKHNHSTREEISEPR*FLSRYG
Trigger: TCCATACCTTGATAAAAACAACCTTGGTTCTGAGAT...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAGTCCACTTCTTTGATTaGGAGTTCCAGCCTAGGTTT +
Preference number: 5 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSVHFFD*EFQPRF
Trigger: AAACCTAGGCTGGAACTCCAAATCAAAGAAGTGGAC...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp CTCCTCTCTTTTGGAATTCAGGAAAAGCTGGCCAGCATAAATTTCAACAGACCTTTTTCCCACTTGAATTaGAGCTCTTCTGCAAGATCA +
Preference number: 5 (lower is better)
Translates to: LLSFGIQEKLASINFNRPFSHLN*SSSARS
Trigger: TGATCTTGCAGAAGAGCTCAAATTCAAGTGGGAAAA...AGGTCTGTTGAAATTTATGCTGGCCAGCTTTTCCTGAATTCCAAAAGAGAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp GCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAACCAGAGAGGAGACTTTATTTTCCCACTaGAATTTGAGCTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: AKLKTVMVAKHNHSTREETLFSH*NLSSSA
Trigger: TGCAGAAGAGCTCAAATTCAAGTGGGAAAATAAAGT...CTCCTCTCTGGTTGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp CTATTAAGTGAGGCCAAACTCAAGACAGTCATGGTTGCAAAACATAATCACTCAATACCCTCCTCTCTTTaGGAATTCAGGAAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: LLSEAKLKTVMVAKHNHSIPSSL*EFRKSW
Trigger: CCAGCTTTTCCTGAATTCCAAAAGAGAGGAGGGTAT...TGAGTGATTATGTTTTGCAACCATGACTGTCTTGAGTTTGGCCTCACTTAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp AGCCAACGACCTAATGGTTTTTGCATTAATGAGTCAGTGAAACTAGTTCAATGTATACCCTCCTCTCTTTaGGAATTCAGGAAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: SQRPNGFCINESVKLVQCIPSSL*EFRKSW
Trigger: CCAGCTTTTCCTGAATTCCAAAAGAGAGGAGGGTAT...ACATTGAACTAGTTTCACTGACTCATTAATGCAAAAACCATTAGGTCGTTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CAA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCTGCTGCTTTGGTATCTaGAATGGAGGACATTGTCTG +
Preference number: 5 (lower is better)
Translates to: HYKTLVSITSYHSPGISFCCFGI*NGGHCL
Trigger: CAGACAATGTCCTCCATTCAAGATACCAAAGCAGCA...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456874.3
ENST00000639862.2
CDS GCA 90 bp GTCACACACTTTCACCATGATATCTCTGTAATTTCCTCTGTAACGTaGAGTAAATGGAATTGCAATGCCTATTGGAAATGGAACTCTCTT +
Preference number: 5 (lower is better)
Translates to: VTHFHHDISVISSVT*SKWNCNAYWKWNSL
Trigger: AAGAGAGTTCCATTTCCAATAGGCATTGCAATTCCATTTACTGCACGTTACAGAGGAAATTACAGAGATATCATGGTGAAAGTGTGTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS-3UTR CAA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCCTGTCTCAGATATTTTaGGGCTCACACTTGAAGTCA +
Preference number: 5 (lower is better)
Translates to: HYKTLVSITSYHSPGISFLSQIF*GSHLKS
Trigger: TGACTTCAAGTGTGAGCCCAAAAATATCTGAGACAG...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS GCA 90 bp TGTCCGGTTGAAATACGAAGGTGTAATCCTATTTATTGTGGCACTTaGTCTTCTTTTATGATCTATCTCAGAACCAAGGTTGTTTTTATC +
Preference number: 5 (lower is better)
Translates to: CPVEIRRCNPIYCGT*SSFMIYLRTKVVFI
Trigger: GATAAAAACAACCTTGGTTCTGAGATAGATCATAAAAGAAGAGCAAGTGCCACAATAAATAGGATTACACCTTCGTATTTCAACCGGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS GCA 90 bp TTTCTGTCTCTGTTGTCTGAATTATGCCATGAGTCTCTTCCCTGTTaGCATTTATGTTCTCAACAGTCATGTGTTCTATTTGTTTATCAT +
Preference number: 5 (lower is better)
Translates to: FLSLLSELCHESLPC*HLCSQQSCVLFVYH
Trigger: ATGATAAACAAATAGAACACATGACTGTTGAGAACATAAATGGCAACAGGGAAGAGACTCATGGCATAATTCAGACAACAGAGACAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CCA 90 bp TTTCACCATGATATCTCTGTAATTTCCTCTGTAACGTGCAGTAAATaGAATTGCAATGCCTATTGGAAATGGAACTCTCTTTTCCTTATC +
Preference number: 5 (lower is better)
Translates to: FHHDISVISSVTCSK*NCNAYWKWNSLFLI
Trigger: GATAAGGAAAAGAGAGTTCCATTTCCAATAGGCATTGCAATTCCATTTACTGCACGTTACAGAGGAAATTACAGAGATATCATGGTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS-3UTR CAA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCATCTCAGAACCAAGGTaGTTTTTATCAAGGTATGGA +
Preference number: 5 (lower is better)
Translates to: HYKTLVSITSYHSPGISFISEPR*FLSRYG
Trigger: TCCATACCTTGATAAAAACAACCTTGGTTCTGAGAT...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS-3UTR CAA 90 bp AGCCAACGACCTAATGGTTTTTGCATTAATGAGTCAGTGAAACTAGTTCAATGTACTTTATTTTCCCACTaGAATTTGAGCTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SQRPNGFCINESVKLVQCTLFSH*NLSSSA
Trigger: TGCAGAAGAGCTCAAATTCAAGTGGGAAAATAAAGT...ACATTGAACTAGTTTCACTGACTCATTAATGCAAAAACCATTAGGTCGTTGGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639862.2
CDS-3UTR CAA 90 bp CATTATAAAACTTTGGTCTCCATAACTTCTTATCATAGCCCAGGCATTTCCTTCTCAAGACAGTCATGGTaGCAAAACATAATCACTCAA +
Preference number: 5 (lower is better)
Translates to: HYKTLVSITSYHSPGISFSRQSW*QNIITQ
Trigger: TTGAGTGATTATGTTTTGCAACCATGACTGTCTTGA...GAAGGAAATGCCTGGGCTATGATAAGAAGTTATGGAGACCAAAGTTTTATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000639862.2
CDS CCA 72 bp CAGGTTCGCACAGCTGCTGCCCTACTGCTGCTCTGCTaGATCCCACCAGCAGTGATCCCACTGCACCTGCTT +
Preference number: 6 (lower is better)
Translates to: QVRTAAALLLLC*IPPAVIPLHLL
Trigger: AAGCAGGTGCAGTGGGATCACTGCTGGTGGGATCCAGCAGAGCAGCAGTAGGGCAGCAGCTGTGCGAACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS GCA 72 bp GCTTTACTCTCTTGGCATCCACACTGTTCCACTAGGTaGCCCCCAGTGCTCAGCTGGACCATGCAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: ALLSWHPHCSTR*PPVLSWTMQPS
Trigger: GGAGGGCTGCATGGTCCAGCTGAGCACTGGGGGGCACCTAGTGGAACAGTGTGGATGCCAAGAGAGTAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS GCA 72 bp CCACACTCCTTCTGTGGGCACGGCAGCTTCTCCCCATaGATCTATCACCACGTAGCATGCCATGATGGTTTC +
Preference number: 6 (lower is better)
Translates to: PHSFCGHGSFSP*IYHHVACHDGF
Trigger: GAAACCATCATGGCATGCTACGTGGTGATAGATGCATGGGGAGAAGCTGCCGTGCCCACAGAAGGAGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS CAA 72 bp TCTTGGTCTCTCCTGCTTCCCTTCCAAGCGAAGCAATaGTCTGTTAGTGGCCACCCTAAGCTCTCCCGGTGT +
Preference number: 6 (lower is better)
Translates to: SWSLLLPFQAKQ*SVSGHPKLSRC
Trigger: ACACCGGGAGAGCTTAGGGTGGCCACTAACAGACAATTGCTTCGCTTGGAAGGGAAGCAGGAGAGACCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS CAA 90 bp ATATGGAGCTCTTGGTCTCTCCTGCTTCCCTTCCAAGCGAAGCAATaGTCTGTTAGTGGCCACCCTAAGCTCTCCCGGTGTGTGAGTGTT +
Preference number: 6 (lower is better)
Translates to: IWSSWSLLLPFQAKQ*SVSGHPKLSRCVSV
Trigger: AACACTCACACACCGGGAGAGCTTAGGGTGGCCACTAACAGACAATTGCTTCGCTTGGAAGGGAAGCAGGAGAGACCAAGAGCTCCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS TCA 72 bp GTTATCCCAAAGGGCTTCTCACAGGAATCACGCAGATaGCCTAGCTCTGGGGCCCATCATCTCATGCAGAAA +
Preference number: 6 (lower is better)
Translates to: VIPKGFSQESRR*PSSGAHHLMQK
Trigger: TTTCTGCATGAGATGATGGGCCCCAGAGCTAGGTCATCTGCGTGATTCCTGTGAGAAGCCCTTTGGGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS GCA 72 bp CGAGATGGCTCTGGAGGTCCTCCAAACCCTTCCAAGTaGAGGTCCTTAAGCACCTGGCTTAAATCTTTGGAA +
Preference number: 6 (lower is better)
Translates to: RDGSGGPPNPSK*RSLSTWLKSLE
Trigger: TTCCAAAGATTTAAGCCAGGTGCTTAAGGACCTGCACTTGGAAGGGTTTGGAGGACCTCCAGAGCCATCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CCA 72 bp TTCTCCTTCTCGAACTTGGAAATGACGAGATGGCTCTaGAGGTCCTCCAAACCCTTCCAAGTGCAGGTCCTT +
Preference number: 6 (lower is better)
Translates to: FSFSNLEMTRWL*RSSKPFQVQVL
Trigger: AAGGACCTGCACTTGGAAGGGTTTGGAGGACCTCCAGAGCCATCTCGTCATTTCCAAGTTCGAGAAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CAA 72 bp AATTTGAGCTCTTCTGCAAGATCACTCCTGCCAATCTaGCGGAGATGTCGAGCCAGGAGGCGAAGTTTGTCG +
Preference number: 6 (lower is better)
Translates to: NLSSSARSLLPI*RRCRARRRSLS
Trigger: CGACAAACTTCGCCTCCTGGCTCGACATCTCCGCAAGATTGGCAGGAGTGATCTTGCAGAAGAGCTCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000503528.1
ENST00000507598.5
ENST00000639862.2
CDS CAA 90 bp TCCCACTTGAATTTGAGCTCTTCTGCAAGATCACTCCTGCCAATCTaGCGGAGATGTCGAGCCAGGAGGCGAAGTTTGTCGGTGAAAGTT +
Preference number: 6 (lower is better)
Translates to: SHLNLSSSARSLLPI*RRCRARRRSLSVKV
Trigger: AACTTTCACCGACAAACTTCGCCTCCTGGCTCGACATCTCCGCAAGATTGGCAGGAGTGATCTTGCAGAAGAGCTCAAATTCAAGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000503528.1
ENST00000507598.5
ENST00000639862.2
CDS TCA 72 bp TCTGTGAGATCATCAGGGTTCTTGAGTTTGATGAGCTaGATGGTGCTACGGCGCAGAGGGAGAGTTGAGGAA +
Preference number: 6 (lower is better)
Translates to: SVRSSGFLSLMS*MVLRRRGRVEE
Trigger: TTCCTCAACTCTCCCTCTGCGCCGTAGCACCATTCAGCTCATCAAACTCAAGAACCCTGATGATCTCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000503528.1
ENST00000507598.5
ENST00000639862.2
CDS CCA 72 bp TCAGCATTTTCTTCTGAGAGCTCCTCAGCCAGCCAATaGAGCAAGTTATCCCAAAGGGCTTCTACAGGATCC +
Preference number: 6 (lower is better)
Translates to: SAFSSESSSASQ*SKLSQRASTGS
Trigger: GGATCCTGTAGAAGCCCTTTGGGATAACTTGCTCCATTGGCTGGCTGAGGAGCTCTCAGAAGAAAATGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CCA 72 bp CCTCCAAACCCTTCCAAGTGCAGGTCCTTAAGCACCTaGCTTAAATCTTTGGAAGGCACCACTAAAACAGCT +
Preference number: 6 (lower is better)
Translates to: PPNPSKCRSLST*LKSLEGTTKTA
Trigger: AGCTGTTTTAGTGGTGCCTTCCAAAGATTTAAGCCAGGTGCTTAAGGACCTGCACTTGGAAGGGTTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CCA 72 bp TCAGCATTTTCTTCTGAGAGCTCCTCAGCCAGCCAATaGAGCAAGTTATCCCAAAGGGCTTCTCACAGGAAT +
Preference number: 6 (lower is better)
Translates to: SAFSSESSSASQ*SKLSQRASHRN
Trigger: ATTCCTGTGAGAAGCCCTTTGGGATAACTTGCTCCATTGGCTGGCTGAGGAGCTCTCAGAAGAAAATGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS TCA 72 bp TCCCCTCTTGCAGCAATGTCTGCTGCTTTGGTATCTTaGATGGAGGACATTGTCTGCTGTGGAGTACATTCA +
Preference number: 6 (lower is better)
Translates to: SPLAAMSAALVS*MEDIVCCGVHS
Trigger: TGAATGTACTCCACAGCAGACAATGTCCTCCATTCAAGATACCAAAGCAGCAGACATTGCTGCAAGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS GCA 72 bp CACGCAGATGACCTAGCTCTGGGGCCCATCATCTCATaGAGAAATTTCAGTTTCTGGCAAAGTTTTCTCAAG +
Preference number: 6 (lower is better)
Translates to: HADDLALGPIIS*RNFSFWQSFLK
Trigger: CTTGAGAAAACTTTGCCAGAAACTGAAATTTCTGCATGAGATGATGGGCCCCAGAGCTAGGTCATCTGCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS CCA 72 bp CATTTAGTTCCCCTCTTGCAGCAATGTCTGCTGCTTTaGTATCTTGAATGGAGGACATTGTCTGCTGTGGAG +
Preference number: 6 (lower is better)
Translates to: HLVPLLQQCLLL*YLEWRTLSAVE
Trigger: CTCCACAGCAGACAATGTCCTCCATTCAAGATACCAAAGCAGCAGACATTGCTGCAAGAGGGGAACTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CAA 72 bp CAATGTCTGCTGCTTTGGTATCTTGAATGGAGGACATaGTCTGCTGTGGAGTACATTCATCATGCATGCCGC +
Preference number: 6 (lower is better)
Translates to: QCLLLWYLEWRT*SAVEYIHHACR
Trigger: GCGGCATGCATGATGAATGTACTCCACAGCAGACAATGTCCTCCATTCAAGATACCAAAGCAGCAGACATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS TCA 72 bp ACTCAGCACATCAAGATACCTTTTCTCGAGACACATTaGTTCTCTTTGTCAAGCAGCACATGCAGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: TQHIKIPFLETH*FSLSSSTCSCW
Trigger: CCAGCAGCTGCATGTGCTGCTTGACAAAGAGAATCAATGTGTCTCGAGAAAAGGTATCTTGATGTGCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357504.7
CDS CCA 72 bp CAAAGGTCATCACCCAAGAGTGCCTGCTTTAGCATCTaGTTTTGTCTCCAAATCTGCTTCAATATTTGGCCC +
Preference number: 6 (lower is better)
Translates to: QRSSPKSACFSI*FCLQICFNIWP
Trigger: GGGCCAAATATTGAAGCAGATTTGGAGACAAAACCAGATGCTAAAGCAGGCACTCTTGGGTGATGACCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS CAA 72 bp CACTCAGCACATCAAGATACCTTTTCTCGAGACACATaGATTCTCTTTGTCAAGCAGCACATGCAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: HSAHQDTFSRDT*ILFVKQHMQLL
Trigger: CAGCAGCTGCATGTGCTGCTTGACAAAGAGAATCAATGTGTCTCGAGAAAAGGTATCTTGATGTGCTGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357504.7
CDS CAA 90 bp CTCTTGCAGCAATGTCTGCTGCTTTGGTATCTTGAATGGAGGACATaGTCTGCTGTGGAGTACATTCATCATGCATGCCGCATAAATTAC +
Preference number: 6 (lower is better)
Translates to: LLQQCLLLWYLEWRT*SAVEYIHHACRINY
Trigger: GTAATTTATGCGGCATGCATGATGAATGTACTCCACAGCAGACAATGTCCTCCATTCAAGATACCAAAGCAGCAGACATTGCTGCAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CCA 72 bp GTTCATACAATTCAACTGATACCAAGCCGCTCTGTATaGTTTTCACAACATCATCAAGCCCACACCAACCAC +
Preference number: 6 (lower is better)
Translates to: VHTIQLIPSRSV*FSQHHQAHTNH
Trigger: GTGGTTGGTGTGGGCTTGATGATGTTGTGAAAACCATACAGAGCGGCTTGGTATCAGTTGAATTGTATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CCA 72 bp CTGGCAAAGTTTTCTCAAGTATTTCTGGCAGTTTCATaGGCTTTACTCTCTTGGCATCCACACTGTTCCACT +
Preference number: 6 (lower is better)
Translates to: LAKFSQVFLAVS*ALLSWHPHCST
Trigger: AGTGGAACAGTGTGGATGCCAAGAGAGTAAAGCCCATGAAACTGCCAGAAATACTTGAGAAAACTTTGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503528.1
CDS CAA 72 bp GATAAGTTGATGGGTGCTGAATGTGAATCAGAGGGCTaGTGGATTGGACTGAGTAGAAAGTATCTTGCTGTG +
Preference number: 6 (lower is better)
Translates to: DKLMGAECESEG*WIGLSRKYLAV
Trigger: CACAGCAAGATACTTTCTACTCAGTCCAATCCACAAGCCCTCTGATTCACATTCAGCACCCATCAACTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CAA 90 bp ACATCAAAACACTGCTGTGGTTCAGTGAACACTTTATTTTCCCACTaGAATTTGAGCTCTTCTGCAAGATCACTCCTGCCAATCTTGCGG +
Preference number: 6 (lower is better)
Translates to: TSKHCCGSVNTLFSH*NLSSSARSLLPILR
Trigger: CCGCAAGATTGGCAGGAGTGATCTTGCAGAAGAGCTCAAATTCAAGTGGGAAAATAAAGTGTTCACTGAACCACAGCAGTGTTTTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000503528.1
ENST00000507598.5
ENST00000639862.2
CDS CCA 72 bp AGCATCTGGTTTTGTCTCCAAATCTGCTTCAATATTTaGCCCAGTTTACCTGAGCCCATGTATTCCATATCC +
Preference number: 6 (lower is better)
Translates to: SIWFCLQICFNI*PSLPEPMYSIS
Trigger: GGATATGGAATACATGGGCTCAGGTAAACTGGGCCAAATATTGAAGCAGATTTGGAGACAAAACCAGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357504.7
ENST00000639862.2
CDS CCA 72 bp AAAGATTTCTCATCGGTTGTTGGGCCAGGTGCTCTCTaGCTGCTTCTAAATCAAGTAATCTTTAGCTTTTCT +
Preference number: 6 (lower is better)
Translates to: KDFSSVVGPGAL*LLLNQVIFSFS
Trigger: AGAAAAGCTAAAGATTACTTGATTTAGAAGCAGCCAGAGAGCACCTGGCCCAACAACCGATGAGAAATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506008.1
CDS CAA 72 bp TCCCAAAGGGCTTCTACAGGATCCTTAGAAACTCTTTaGGTACTCTGTGGACGGTTGATTAATTTCTTATGC +
Preference number: 6 (lower is better)
Translates to: SQRASTGSLETL*VLCGRLINFLC
Trigger: GCATAAGAAATTAATCAACCGTCCACAGAGTACCAAAAGAGTTTCTAAGGATCCTGTAGAAGCCCTTTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CAA 90 bp TCTCTTCTCTTGGGCTTTCTGAAGTCTCTTGAATTTCTGTCTCTGTaGTCTGAATTATGCCATGAGTCTCTTCCCTGTTGCCATTTATGT +
Preference number: 6 (lower is better)
Translates to: SLLLGFLKSLEFLSL*SELCHESLPCCHLC
Trigger: ACATAAATGGCAACAGGGAAGAGACTCATGGCATAATTCAGACAACAGAGACAGAAATTCAAGAGACTTCAGAAAGCCCAAGAGAAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CAA 90 bp AAGCACAGGTCCCCTTATAACCTCCCTTCATTCCTTCTAGTGAATTaGGGTTTAGGTAACTTGATTGAAGGTTTATGTCACACACTTTCA +
Preference number: 6 (lower is better)
Translates to: KHRSPYNLPSFLLVN*GLGNLIEGLCHTLS
Trigger: TGAAAGTGTGTGACATAAACCTTCAATCAAGTTACCTAAACCCAAATTCACTAGAAGGAATGAAGGGAGGTTATAAGGGGACCTGTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CAA 90 bp TCTGAAAAGGATAAGTTGATGGGTGCTGAATGTGAATCAGAGGGCTaGTGGATTGGACTGAGTAGAAAGTATCTTGCTGTGCTTTTAAAT +
Preference number: 6 (lower is better)
Translates to: SEKDKLMGAECESEG*WIGLSRKYLAVLLN
Trigger: ATTTAAAAGCACAGCAAGATACTTTCTACTCAGTCCAATCCACAAGCCCTCTGATTCACATTCAGCACCCATCAACTTATCCTTTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CAA 90 bp AGCAAGTTATCCCAAAGGGCTTCTACAGGATCCTTAGAAACTCTTTaGGTACTCTGTGGACGGTTGATTAATTTCTTATGCTTTGGCAAT +
Preference number: 6 (lower is better)
Translates to: SKLSQRASTGSLETL*VLCGRLINFLCFGN
Trigger: ATTGCCAAAGCATAAGAAATTAATCAACCGTCCACAGAGTACCAAAAGAGTTTCTAAGGATCCTGTAGAAGCCCTTTGGGATAACTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS GCA 72 bp CTGTTGTCTGAATTATGCCATGAGTCTCTTCCCTGTTaGCATTTATGTTCTCAACAGTCATGTGTTCTATTT +
Preference number: 6 (lower is better)
Translates to: LLSELCHESLPC*HLCSQQSCVLF
Trigger: AAATAGAACACATGACTGTTGAGAACATAAATGGCAACAGGGAAGAGACTCATGGCATAATTCAGACAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CAA 72 bp TCCCCTTATAACCTCCCTTCATTCCTTCTAGTGAATTaGGGTTTAGGTAACTTGATTGAAGGTTTATGTCAC +
Preference number: 6 (lower is better)
Translates to: SPYNLPSFLLVN*GLGNLIEGLCH
Trigger: GTGACATAAACCTTCAATCAAGTTACCTAAACCCAAATTCACTAGAAGGAATGAAGGGAGGTTATAAGGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS GCA 72 bp TTTCACCATGATATCTCTGTAATTTCCTCTGTAACGTaGAGTAAATGGAATTGCAATGCCTATTGGAAATGG +
Preference number: 6 (lower is better)
Translates to: FHHDISVISSVT*SKWNCNAYWKW
Trigger: CCATTTCCAATAGGCATTGCAATTCCATTTACTGCACGTTACAGAGGAAATTACAGAGATATCATGGTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS CCA 72 bp GATATCTCTGTAATTTCCTCTGTAACGTGCAGTAAATaGAATTGCAATGCCTATTGGAAATGGAACTCTCTT +
Preference number: 6 (lower is better)
Translates to: DISVISSVTCSK*NCNAYWKWNSL
Trigger: AAGAGAGTTCCATTTCCAATAGGCATTGCAATTCCATTTACTGCACGTTACAGAGGAAATTACAGAGATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2
CDS GCA 72 bp GAAATACGAAGGTGTAATCCTATTTATTGTGGCACTTaGTCTTCTTTTATGATCTATCTCAGAACCAAGGTT +
Preference number: 6 (lower is better)
Translates to: EIRRCNPIYCGT*SSFMIYLRTKV
Trigger: AACCTTGGTTCTGAGATAGATCATAAAAGAAGAGCAAGTGCCACAATAAATAGGATTACACCTTCGTATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357504.7
ENST00000456874.3
ENST00000507598.5
ENST00000639862.2