Pregenerated sensors for DTD2 (Homo sapiens)
Ensembl gene IDs: ENSG00000129480Ensembl transcript IDs: ENST00000310850.9, ENST00000549850.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACACGCTCTTCCTCTCGGGTGCTACAACTGGCGCTGGGGAACGGTaGTGCTGGACCGAAAAGACAAGCGCAGCCAGGCAGGCCACCGCG | + |
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Preference number: 1 (lower is better) Translates to: DTLFLSGATTGAGER*CWTEKTSAARQATA Trigger: CGCGGTGGCCTGCCTGGCTGCGCTTGTCTTTTCGGTCCAGCATCACCGTTCCCCAGCGCCAGTTGTAGCACCCGAGAGGAAGAGCGTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| 3UTR CCA 90 bp | CAAGAAGGGAGACACGCTCTTCCTCTCGGGTGCTACAACTGGCGCTaGGGAACGGTGATGCTGGACCGAAAAGACAAGCGCAGCCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: QEGRHALPLGCYNWR*GTVMLDRKDKRSQA Trigger: TGCCTGGCTGCGCTTGTCTTTTCGGTCCAGCATCACCGTTCCCCAGCGCCAGTTGTAGCACCCGAGAGGAAGAGCGTGTCTCCCTTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| 3UTR CCA 90 bp | ACTCAAGGTGTCAGCATGGTCTGTTTCTGGAGACTACTTTCTTTCTaGCTTATATGTTCCAGGATGGGATGGTTGGAGGAGCCCCATCTC | + |
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Preference number: 1 (lower is better) Translates to: TQGVSMVCFWRLLSF*LICSRMGWLEEPHL Trigger: GAGATGGGGCTCCTCCAACCATCCCATCCTGGAACATATAAGCCAGAAAGAAAGTAGTCTCCAGAAACAGACCATGCTGACACCTTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR CCA 90 bp | GGAGACTACTTTCTTTCTGGCTTATATGTTCCAGGATGGGATGGTTaGAGGAGCCCCATCTCCAGATACCATCACATTAATAAGGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: GDYFLSGLYVPGWDG*RSPISRYHHINKGF Trigger: GAAGCCCTTATTAATGTGATGGTATCTGGAGATGGGGCTCCTCCAACCATCCCATCCTGGAACATATAAGCCAGAAAGAAAGTAGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR CCA 90 bp | TCTGTTTCTGGAGACTACTTTCTTTCTGGCTTATATGTTCCAGGATaGGATGGTTGGAGGAGCCCCATCTCCAGATACCATCACATTAAT | + |
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Preference number: 1 (lower is better) Translates to: SVSGDYFLSGLYVPG*DGWRSPISRYHHIN Trigger: ATTAATGTGATGGTATCTGGAGATGGGGCTCCTCCAACCATCCCATCCTGGAACATATAAGCCAGAAAGAAAGTAGTCTCCAGAAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR-3UTR TCA 90 bp | TGTTCCACTACAACCCTAGCTTCAGCACACTTGCTATTAGCAGCTACTTCTTTTCGGCCAGCTTCAAGCTaGCCCGGTATCCCCGCGGCC | + |
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Preference number: 2 (lower is better) Translates to: CSTTTLASAHLLLAATSFRPASS*PGIPAA Trigger: GGCCGCGGGGATACCGGGTCAGCTTGAAGCTGGCCG...AAAAGAAGTAGCTGCTAATAGCAAGTGTGCTGAAGCTAGGGTTGTAGTGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| 3UTR-3UTR GCA 90 bp | GCTCAGACTGCCCTAACAAAATACCATAGGACTGGGTGGTTTAAACACCAGAAACCGAGATTGCGCCACTaGACTCCAGTCTGGCGACAG | + |
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Preference number: 2 (lower is better) Translates to: AQTALTKYHRTGWFKHQKPRLRH*TPVWRQ Trigger: CTGTCGCCAGACTGGAGTGCAGTGGCGCAATCTCGG...TTTCTGGTGTTTAAACCACCCAGTCCTATGGTATTTTGTTAGGGCAGTCTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR-3UTR CCA 90 bp | TTCAAACTCAAGGTGTCAGCATGGTCTGTTTCTGGAGACTACTTTCTTTCTGGCCTATTCTGCCCAGGCTaGTCGCAAACTCCTGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: FKLKVSAWSVSGDYFLSGLFCPG*SQTPGL Trigger: GAGCCCAGGAGTTTGCGACCAGCCTGGGCAGAATAG...GCCAGAAAGAAAGTAGTCTCCAGAAACAGACCATGCTGACACCTTGAGTTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGACTGCCCTAACAAAATACCATAGGACTGGGTGGTTTAAACACCAGAAAGGCAGGAGAATCGCTTaGATCCAGGAGGTGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: AQTALTKYHRTGWFKHQKGRRIA*IQEVEV Trigger: AACCTCCACCTCCTGGATTCAAGCGATTCTCCTGCC...TTTCTGGTGTTTAAACCACCCAGTCCTATGGTATTTTGTTAGGGCAGTCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR-3UTR GCA 90 bp | GGTCTGTTTCTGGAGACTACTTTCTTTCTGGCTTATATGTTCCAGGATGGGATGTGGGTCTTGCTATTCTaGCCAGGCTGGTCGCAAACT | + |
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Preference number: 2 (lower is better) Translates to: GLFLETTFFLAYMFQDGMWVLLF*PGWSQT Trigger: AGTTTGCGACCAGCCTGGGCAGAATAGCAAGACCCA...CATCCCATCCTGGAACATATAAGCCAGAAAGAAAGTAGTCTCCAGAAACAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR-3UTR TCA 90 bp | CAAAAGTTAAGGACAATGAGCTCATTACCAAGCCAGTTATTGATTCTCTGGTTCTCCTGGCCAGCACGGTaGAACCCCATCTCTACTAAA | + |
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Preference number: 2 (lower is better) Translates to: QKLRTMSSLPSQLLILWFSWPAR*NPISTK Trigger: TTTAGTAGAGATGGGGTTTCACCGTGCTGGCCAGGA...GAACCAGAGAATCAATAACTGGCTTGGTAATGAGCTCATTGTCCTTAACTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR-3UTR TCA 90 bp | TTCAAACTCAAGGTGTCAGCATGGTCTGTTTCTGGAGACTACTTTCTTTCTGGCGTGCAGAGTTATATATaGAACCCAAGATTTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: FKLKVSAWSVSGDYFLSGVQSYI*NPRFSC Trigger: ACAGGAAAATCTTGGGTTTCATATATAACTCTGCAC...GCCAGAAAGAAAGTAGTCTCCAGAAACAGACCATGCTGACACCTTGAGTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR-3UTR TCA 90 bp | TGTTCCACTACAACCCTAGCTTCAGCACACTTGCTATTAGCAGCTACTTCTTTTTTTCCAGAGTTAGAGTaGTATTGCATGTTTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: CSTTTLASAHLLLAATSFFPELE*YCMFLP Trigger: AGGAAGAAACATGCAATATCACTCTAACTCTGGAAA...AAAAGAAGTAGCTGCTAATAGCAAGTGTGCTGAAGCTAGGGTTGTAGTGGAACA 40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| 3UTR-3UTR CCA 90 bp | ACTCAAGGTGTCAGCATGGTCTGTTTCTGGAGACTACTTTCTTTCTGGCTTATAATGAGCCACCACATTTaGCCCTATATTACATTTTCA | + |
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Preference number: 2 (lower is better) Translates to: TQGVSMVCFWRLLSFWLIMSHHI*PYITFS Trigger: TGAAAATGTAATATAGGGCCAAATGTGGTGGCTCAT...TATAAGCCAGAAAGAAAGTAGTCTCCAGAAACAGACCATGCTGACACCTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGTTAAGGACAATGAGCTCATTACCAAGCCAGTTATTGATTCTCTGGTTCAGCATGGTCTGTTTCTaGAGACTACTTTCTTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: QKLRTMSSLPSQLLILWFSMVCF*RLLSFW Trigger: CCAGAAAGAAAGTAGTCTCCAGAAACAGACCATGCT...GAACCAGAGAATCAATAACTGGCTTGGTAATGAGCTCATTGTCCTTAACTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGTTAAGGACAATGAGCTCATTACCAAGCCAGTTATTGATTCTCTGGTTCCATCCAATTAGCAGGTaGAGAGTTATATATGAAACC | + |
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Preference number: 2 (lower is better) Translates to: QKLRTMSSLPSQLLILWFHPISR*RVIYET Trigger: GGTTTCATATATAACTCTGCACCTGCTAATTGGATG...GAACCAGAGAATCAATAACTGGCTTGGTAATGAGCTCATTGTCCTTAACTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGTTAAGGACAATGAGCTCATTACCAAGCCAGTTATTGATTCTCTGGTTCTCAACATATAAATTTTaGGGACGGGAACATCTAGTC | + |
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Preference number: 2 (lower is better) Translates to: QKLRTMSSLPSQLLILWFSTYKF*GREHLV Trigger: GACTAGATGTTCCCGTCCCCAAAATTTATATGTTGA...GAACCAGAGAATCAATAACTGGCTTGGTAATGAGCTCATTGTCCTTAACTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR TCA 72 bp | TTCCTCTCGGGTGCTACAACTGGCGCTGGGGAACGGTaGTGCTGGACCGAAAAGACAAGCGCAGCCAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: FLSGATTGAGER*CWTEKTSAARQ Trigger: CTGCCTGGCTGCGCTTGTCTTTTCGGTCCAGCATCACCGTTCCCCAGCGCCAGTTGTAGCACCCGAGAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| 3UTR CCA 72 bp | AGACACGCTCTTCCTCTCGGGTGCTACAACTGGCGCTaGGGAACGGTGATGCTGGACCGAAAAGACAAGCGC | + |
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Preference number: 3 (lower is better) Translates to: RHALPLGCYNWR*GTVMLDRKDKR Trigger: GCGCTTGTCTTTTCGGTCCAGCATCACCGTTCCCCAGCGCCAGTTGTAGCACCCGAGAGGAAGAGCGTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| 3UTR CCA 72 bp | GAAGGGAGACACGCTCTTCCTCTCGGGTGCTACAACTaGCGCTGGGGAACGGTGATGCTGGACCGAAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: EGRHALPLGCYN*RWGTVMLDRKD Trigger: GTCTTTTCGGTCCAGCATCACCGTTCCCCAGCGCCAGTTGTAGCACCCGAGAGGAAGAGCGTGTCTCCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| 3UTR-3UTR CAA 90 bp | GCTCAGACTGCCCTAACAAAATACCATAGGACTGGGTGGTTTAAACACCAGAAATCCAGGATGGGATGGTaGGAGGAGCCCCATCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: AQTALTKYHRTGWFKHQKSRMGW*EEPHLQ Trigger: CTGGAGATGGGGCTCCTCCAACCATCCCATCCTGGA...TTTCTGGTGTTTAAACCACCCAGTCCTATGGTATTTTGTTAGGGCAGTCTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR CCA 72 bp | TTTCTTTCTGGCTTATATGTTCCAGGATGGGATGGTTaGAGGAGCCCCATCTCCAGATACCATCACATTAAT | + |
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Preference number: 3 (lower is better) Translates to: FLSGLYVPGWDG*RSPISRYHHIN Trigger: ATTAATGTGATGGTATCTGGAGATGGGGCTCCTCCAACCATCCCATCCTGGAACATATAAGCCAGAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR-3UTR CAA 90 bp | CAAAAGTTAAGGACAATGAGCTCATTACCAAGCCAGTTATTGATTCTCTGGTTCCATGAGCCACCACATTaGGCCCTATATTACATTTTC | + |
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Preference number: 3 (lower is better) Translates to: QKLRTMSSLPSQLLILWFHEPPH*ALYYIF Trigger: GAAAATGTAATATAGGGCCAAATGTGGTGGCTCATG...GAACCAGAGAATCAATAACTGGCTTGGTAATGAGCTCATTGTCCTTAACTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR CCA 72 bp | ACAATGAGCTCATTACCAAGCCAGTTATTGATTCTCTaGTTCCAAAATAGAACAGTACAGGAAGGGTATAGA | + |
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Preference number: 3 (lower is better) Translates to: TMSSLPSQLLIL*FQNRTVQEGYR Trigger: TCTATACCCTTCCTGTACTGTTCTATTTTGGAACCAGAGAATCAATAACTGGCTTGGTAATGAGCTCATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR-3UTR CAA 90 bp | CAAAAGTTAAGGACAATGAGCTCATTACCAAGCCAGTTATTGATTCTCTGGTTCTCACTAACAGAAAAATaGACACTGGCTCCATATCAT | + |
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Preference number: 3 (lower is better) Translates to: QKLRTMSSLPSQLLILWFSLTEK*TLAPYH Trigger: ATGATATGGAGCCAGTGTCAATTTTTCTGTTAGTGA...GAACCAGAGAATCAATAACTGGCTTGGTAATGAGCTCATTGTCCTTAACTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR GCA 90 bp | GCCACCGCGGCCAGCTTCAAGCTGACCCGGTATCCCCGCGGCCGGACCGCCGGTGAGGATAACGAGAGCTaGCGGGCTGACGTTACCTCC | + |
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Preference number: 4 (lower is better) Translates to: ATAASFKLTRYPRGRTAGEDNES*RADVTS Trigger: GGAGGTAACGTCAGCCCGGCAGCTCTCGTTATCCTC...ACCGGCGGTCCGGCCGCGGGGATACCGGGTCAGCTTGAAGCTGGCCGCGGTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| CDS-3UTR TCA 90 bp | CTGGACCGAAAAGACAAGCGCAGCCAGGCAGGCCACCGCGGCCAGCTTCAAGCTCGGCCAGCTTCAAGCTaGCCCGGTATCCCCGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: LDRKDKRSQAGHRGQLQARPASS*PGIPAA Trigger: GGCCGCGGGGATACCGGGTCAGCTTGAAGCTGGCCG...AGCTTGAAGCTGGCCGCGGTGGCCTGCCTGGCTGCGCTTGTCTTTTCGGTCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| CDS-3UTR CCA 90 bp | CTGGACCGAAAAGACAAGCGCAGCCAGGCAGGCCACCGCGGCCAGCTTCAAGCTTGCTACAACTGGCGCTaGGGAACGGTGATGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LDRKDKRSQAGHRGQLQACYNWR*GTVMLD Trigger: GTCCAGCATCACCGTTCCCCAGCGCCAGTTGTAGCA...AGCTTGAAGCTGGCCGCGGTGGCCTGCCTGGCTGCGCTTGTCTTTTCGGTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| CDS-3UTR CCA 90 bp | CACGCTCTTCCTCTCGGGTGCTACAACTGGCGCTGGGGAACGGTGATGCTGGACCTCGGGTGCTACAACTaGCGCTGGGGAACGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: HALPLGCYNWRWGTVMLDLGCYN*RWGTVM Trigger: CATCACCGTTCCCCAGCGCCAGTTGTAGCACCCGAG...GTCCAGCATCACCGTTCCCCAGCGCCAGTTGTAGCACCCGAGAGGAAGAGCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| CDS-3UTR GCA 90 bp | AAGAAGGGAGACACGCTCTTCCTCTCGGGTGCTACAACTGGCGCTGGGGAACGGGCTCTTCCTCTCGGGTaGTACAACTGGCGCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KKGDTLFLSGATTGAGERALPLG*YNWRWG Trigger: TCCCCAGCGCCAGTTGTAGCACCCGAGAGGAAGAGC...CCGTTCCCCAGCGCCAGTTGTAGCACCCGAGAGGAAGAGCGTGTCTCCCTTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| CDS-3UTR TCA 90 bp | CGCAGCCAGGCAGGCCACCGCGGCCAGCTTCAAGCTGACCCGGTATCCCCGCGGTTTCCAGAGTTAGAGTaGTATTGCATGTTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: RSQAGHRGQLQADPVSPRFPELE*YCMFLP Trigger: AGGAAGAAACATGCAATATCACTCTAACTCTGGAAA...CCGCGGGGATACCGGGTCAGCTTGAAGCTGGCCGCGGTGGCCTGCCTGGCTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| CDS-3UTR GCA 90 bp | TGGGGAACGGTGATGCTGGACCGAAAAGACAAGCGCAGCCAGGCAGGCCACCGCGCCTGTTCCCATAAGTaGCATGTTCCACTACAACCC | + |
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Preference number: 4 (lower is better) Translates to: WGTVMLDRKDKRSQAGHRACSHK*HVPLQP Trigger: GGGTTGTAGTGGAACATGGCACTTATGGGAACAGGC...GCGGTGGCCTGCCTGGCTGCGCTTGTCTTTTCGGTCCAGCATCACCGTTCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| CDS-3UTR TCA 90 bp | ACAACCCTAGCTTCAGCACACTTGCTATTAGCAGCTACTTCTTTTTCACATAGACGAGAGCTGCCGGGCTaGCGTTACCTCCACCCACTG | + |
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Preference number: 4 (lower is better) Translates to: TTLASAHLLLAATSFSHRRELPG*RYLHPL Trigger: CAGTGGGTGGAGGTAACGTCAGCCCGGCAGCTCTCG...TCTATGTGAAAAAGAAGTAGCTGCTAATAGCAAGTGTGCTGAAGCTAGGGTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| CDS-3UTR GCA 90 bp | AGGGAGACACGCTCTTCCTCTCGGGTGCTACAACTGGCGCTGGGGAACGGTGATTCCAATATAGAGACATaGTTGCCATTTTCTGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: RETRSSSRVLQLALGNGDSNIET*LPFSVS Trigger: TGAGACAGAAAATGGCAAGCATGTCTCTATATTGGA...ATCACCGTTCCCCAGCGCCAGTTGTAGCACCCGAGAGGAAGAGCGTGTCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| CDS-3UTR TCA 90 bp | TGTTCCACTACAACCCTAGCTTCAGCACACTTGCTATTAGCAGCTACTTCTTTTGGCGCTGGGGAACGGTaGTGCTGGACCGAAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: CSTTTLASAHLLLAATSFGAGER*CWTEKT Trigger: TGTCTTTTCGGTCCAGCATCACCGTTCCCCAGCGCC...AAAAGAAGTAGCTGCTAATAGCAAGTGTGCTGAAGCTAGGGTTGTAGTGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| CDS-3UTR CCA 90 bp | GCTCAGACTGCCCTAACAAAATACCATAGGACTGGGTGGTTTAAACACCAGAAACCAGGATGGGATGGTTaGAGGAGCCCCATCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: AQTALTKYHRTGWFKHQKPGWDG*RSPISR Trigger: TCTGGAGATGGGGCTCCTCCAACCATCCCATCCTGG...TTTCTGGTGTTTAAACCACCCAGTCCTATGGTATTTTGTTAGGGCAGTCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR TCA 90 bp | GGTCTGTTTCTGGAGACTACTTTCTTTCTGGCTTATATGTTCCAGGATGGGATGTCCTGGCCAGCACGGTaGAACCCCATCTCTACTAAA | + |
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Preference number: 4 (lower is better) Translates to: GLFLETTFFLAYMFQDGMSWPAR*NPISTK Trigger: TTTAGTAGAGATGGGGTTTCACCGTGCTGGCCAGGA...CATCCCATCCTGGAACATATAAGCCAGAAAGAAAGTAGTCTCCAGAAACAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR GCA 90 bp | CAAAAGTTAAGGACAATGAGCTCATTACCAAGCCAGTTATTGATTCTCTGGTTCCCGAGATTGCGCCACTaGACTCCAGTCTGGCGACAG | + |
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Preference number: 4 (lower is better) Translates to: QKLRTMSSLPSQLLILWFPRLRH*TPVWRQ Trigger: CTGTCGCCAGACTGGAGTGCAGTGGCGCAATCTCGG...GAACCAGAGAATCAATAACTGGCTTGGTAATGAGCTCATTGTCCTTAACTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR CCA 90 bp | ACTCAAGGTGTCAGCATGGTCTGTTTCTGGAGACTACTTTCTTTCTGGCTTATATTATATGTTCCAGGATaGGATGGTTGGAGGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: TQGVSMVCFWRLLSFWLILYVPG*DGWRSP Trigger: GGGGCTCCTCCAACCATCCCATCCTGGAACATATAA...TATAAGCCAGAAAGAAAGTAGTCTCCAGAAACAGACCATGCTGACACCTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR CCA 90 bp | ACAAAATACCATAGGACTGGGTGGTTTAAACACCAGAAATTTATTTCCTCACAGTGTTCCAGGATGGGATaGTTGGAGGAGCCCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: TKYHRTGWFKHQKFISSQCSRMG*LEEPHL Trigger: GAGATGGGGCTCCTCCAACCATCCCATCCTGGAACA...CTGTGAGGAAATAAATTTCTGGTGTTTAAACCACCCAGTCCTATGGTATTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR CAA 72 bp | GTGCCATGTTCCACTACAACCCTAGCTTCAGCACACTaGCTATTAGCAGCTACTTCTTTTTCACATAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: VPCSTTTLASAH*LLAATSFSHRV Trigger: GACTCTATGTGAAAAAGAAGTAGCTGCTAATAGCAAGTGTGCTGAAGCTAGGGTTGTAGTGGAACATGGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| CDS-3UTR TCA 90 bp | ACTCAAGGTGTCAGCATGGTCTGTTTCTGGAGACTACTTTCTTTCTGGCTTATAACTCAATTAAGTGTGTaGATGGTCCGTTGGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TQGVSMVCFWRLLSFWLITQLSV*MVRWCP Trigger: TGGACACCAACGGACCATTCACACACTTAATTGAGT...TATAAGCCAGAAAGAAAGTAGTCTCCAGAAACAGACCATGCTGACACCTTGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR CCA 90 bp | GGTCTGTTTCTGGAGACTACTTTCTTTCTGGCTTATATGTTCCAGGATGGGATGAGCATGGTCTGTTTCTaGAGACTACTTTCTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GLFLETTFFLAYMFQDGMSMVCF*RLLSFW Trigger: CCAGAAAGAAAGTAGTCTCCAGAAACAGACCATGCT...CATCCCATCCTGGAACATATAAGCCAGAAAGAAAGTAGTCTCCAGAAACAGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR GCA 90 bp | ACAAAATACCATAGGACTGGGTGGTTTAAACACCAGAAATTTATTTCCTCACAGGCCTGTTCCCATAAGTaGCATGTTCCACTACAACCC | + |
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Preference number: 4 (lower is better) Translates to: TKYHRTGWFKHQKFISSQACSHK*HVPLQP Trigger: GGGTTGTAGTGGAACATGGCACTTATGGGAACAGGC...CTGTGAGGAAATAAATTTCTGGTGTTTAAACCACCCAGTCCTATGGTATTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR TCA 90 bp | TTCAAACTCAAGGTGTCAGCATGGTCTGTTTCTGGAGACTACTTTCTTTCTGGCTTTCCAGAGTTAGAGTaGTATTGCATGTTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: FKLKVSAWSVSGDYFLSGFPELE*YCMFLP Trigger: AGGAAGAAACATGCAATATCACTCTAACTCTGGAAA...GCCAGAAAGAAAGTAGTCTCCAGAAACAGACCATGCTGACACCTTGAGTTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR TCA 90 bp | ACTCAAGGTGTCAGCATGGTCTGTTTCTGGAGACTACTTTCTTTCTGGCTTATAGGAGTTTGCCAAAACTaGATATTACCTCTTACTGAC | + |
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Preference number: 4 (lower is better) Translates to: TQGVSMVCFWRLLSFWLIGVCQN*ILPLTD Trigger: GTCAGTAAGAGGTAATATTCAGTTTTGGCAAACTCC...TATAAGCCAGAAAGAAAGTAGTCTCCAGAAACAGACCATGCTGACACCTTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR GCA 90 bp | TTCAAACTCAAGGTGTCAGCATGGTCTGTTTCTGGAGACTACTTTCTTTCTGGCTCCAATATAGAGACATaGTTGCCATTTTCTGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: FKLKVSAWSVSGDYFLSGSNIET*LPFSVS Trigger: TGAGACAGAAAATGGCAAGCATGTCTCTATATTGGA...GCCAGAAAGAAAGTAGTCTCCAGAAACAGACCATGCTGACACCTTGAGTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR GCA 90 bp | GCTCAGACTGCCCTAACAAAATACCATAGGACTGGGTGGTTTAAACACCAGAAACATCCAATTAGCAGGTaGAGAGTTATATATGAAACC | + |
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Preference number: 4 (lower is better) Translates to: AQTALTKYHRTGWFKHQKHPISR*RVIYET Trigger: GGTTTCATATATAACTCTGCACCTGCTAATTGGATG...TTTCTGGTGTTTAAACCACCCAGTCCTATGGTATTTTGTTAGGGCAGTCTGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR CCA 90 bp | GGTCTGTTTCTGGAGACTACTTTCTTTCTGGCTTATATGTTCCAGGATGGGATGATGAGCCACCACATTTaGCCCTATATTACATTTTCA | + |
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Preference number: 4 (lower is better) Translates to: GLFLETTFFLAYMFQDGMMSHHI*PYITFS Trigger: TGAAAATGTAATATAGGGCCAAATGTGGTGGCTCAT...CATCCCATCCTGGAACATATAAGCCAGAAAGAAAGTAGTCTCCAGAAACAGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR CCA 90 bp | ACTCAAGGTGTCAGCATGGTCTGTTTCTGGAGACTACTTTCTTTCTGGCTTATATCAACATATAAATTTTaGGGACGGGAACATCTAGTC | + |
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Preference number: 4 (lower is better) Translates to: TQGVSMVCFWRLLSFWLISTYKF*GREHLV Trigger: GACTAGATGTTCCCGTCCCCAAAATTTATATGTTGA...TATAAGCCAGAAAGAAAGTAGTCTCCAGAAACAGACCATGCTGACACCTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR TCA 90 bp | CAAAAGTTAAGGACAATGAGCTCATTACCAAGCCAGTTATTGATTCTCTGGTTCGTGCAGAGTTATATATaGAACCCAAGATTTTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: QKLRTMSSLPSQLLILWFVQSYI*NPRFSC Trigger: ACAGGAAAATCTTGGGTTTCATATATAACTCTGCAC...GAACCAGAGAATCAATAACTGGCTTGGTAATGAGCTCATTGTCCTTAACTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR TCA 90 bp | ACAAAATACCATAGGACTGGGTGGTTTAAACACCAGAAATTTATTTCCTCACAGTTCCTCTCTTGCCTTTaGAAAGTTTACCTTACTAGC | + |
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Preference number: 4 (lower is better) Translates to: TKYHRTGWFKHQKFISSQFLSCL*KVYLTS Trigger: GCTAGTAAGGTAAACTTTTCAAAGGCAAGAGAGGAA...CTGTGAGGAAATAAATTTCTGGTGTTTAAACCACCCAGTCCTATGGTATTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR CAA 72 bp | GGAACATCTAGTCCAAAACATTCACTAACAGAAAAATaGACACTGGCTCCATATCATCAAGCAGATAATATG | + |
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Preference number: 4 (lower is better) Translates to: GTSSPKHSLTEK*TLAPYHQADNM Trigger: CATATTATCTGCTTGATGATATGGAGCCAGTGTCAATTTTTCTGTTAGTGAATGTTTTGGACTAGATGTTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| 3UTR CAA 72 bp | AGAATGTTGCCAGGTAGATCCAATATAGAGACATGCTaGCCATTTTCTGTCTCACTTAATTTCACATTTAAC | + |
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Preference number: 4 (lower is better) Translates to: RMLPGRSNIETC*PFSVSLNFTFN Trigger: GTTAAATGTGAAATTAAGTGAGACAGAAAATGGCAAGCATGTCTCTATATTGGATCTACCTGGCAACATTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| CDS TCA 90 bp | AAAAGACAAGCGCAGCCAGGCAGGCCACCGCGGCCAGCTTCAAGCTaGCCCGGTATCCCCGCGGCCGGACCGCCGGTCTCAGAGGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: KRQAQPGRPPRPASS*PGIPAAGPPVSEGD Trigger: GTCTCCCTCTGAGACCGGCGGTCCGGCCGCGGGGATACCGGGTCAGCTTGAAGCTGGCCGCGGTGGCCTGCCTGGCTGCGCTTGTCTTTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| CDS-3UTR CAA 90 bp | CACGCTCTTCCTCTCGGGTGCTACAACTGGCGCTGGGGAACGGTGATGCTGGACTCCTCCAAGGGTAGCTaGAGGGATAATAAGAATGTT | + |
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Preference number: 5 (lower is better) Translates to: HALPLGCYNWRWGTVMLDSSKGS*RDNKNV Trigger: AACATTCTTATTATCCCTCAAGCTACCCTTGGAGGA...GTCCAGCATCACCGTTCCCCAGCGCCAGTTGTAGCACCCGAGAGGAAGAGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| CDS-3UTR CAA 90 bp | TTCAAACTCAAGGTGTCAGCATGGTCTGTTTCTGGAGACTACTTTCTTTCTGGCTCCAGGATGGGATGGTaGGAGGAGCCCCATCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: FKLKVSAWSVSGDYFLSGSRMGW*EEPHLQ Trigger: CTGGAGATGGGGCTCCTCCAACCATCCCATCCTGGA...GCCAGAAAGAAAGTAGTCTCCAGAAACAGACCATGCTGACACCTTGAGTTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR CAA 90 bp | ACTCAAGGTGTCAGCATGGTCTGTTTCTGGAGACTACTTTCTTTCTGGCTTATATGTGTGAATGGTCCGTaGGTGTCCAGCTTTAACACC | + |
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Preference number: 5 (lower is better) Translates to: TQGVSMVCFWRLLSFWLICVNGP*VSSFNT Trigger: GGTGTTAAAGCTGGACACCAACGGACCATTCACACA...TATAAGCCAGAAAGAAAGTAGTCTCCAGAAACAGACCATGCTGACACCTTGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR CAA 90 bp | GGTCTGTTTCTGGAGACTACTTTCTTTCTGGCTTATATGTTCCAGGATGGGATGCTAGCTTCAGCACACTaGCTATTAGCAGCTACTTCT | + |
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Preference number: 5 (lower is better) Translates to: GLFLETTFFLAYMFQDGMLASAH*LLAATS Trigger: AGAAGTAGCTGCTAATAGCAAGTGTGCTGAAGCTAG...CATCCCATCCTGGAACATATAAGCCAGAAAGAAAGTAGTCTCCAGAAACAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR CAA 90 bp | GCTCAGACTGCCCTAACAAAATACCATAGGACTGGGTGGTTTAAACACCAGAAATCCTCCAAGGGTAGCTaGAGGGATAATAAGAATGTT | + |
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Preference number: 5 (lower is better) Translates to: AQTALTKYHRTGWFKHQKSSKGS*RDNKNV Trigger: AACATTCTTATTATCCCTCAAGCTACCCTTGGAGGA...TTTCTGGTGTTTAAACCACCCAGTCCTATGGTATTTTGTTAGGGCAGTCTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR CAA 90 bp | GCTCAGACTGCCCTAACAAAATACCATAGGACTGGGTGGTTTAAACACCAGAAATCACTAACAGAAAAATaGACACTGGCTCCATATCAT | + |
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Preference number: 5 (lower is better) Translates to: AQTALTKYHRTGWFKHQKSLTEK*TLAPYH Trigger: ATGATATGGAGCCAGTGTCAATTTTTCTGTTAGTGA...TTTCTGGTGTTTAAACCACCCAGTCCTATGGTATTTTGTTAGGGCAGTCTGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR CAA 90 bp | ACTCAAGGTGTCAGCATGGTCTGTTTCTGGAGACTACTTTCTTTCTGGCTTATAAATATAGAGACATGCTaGCCATTTTCTGTCTCACTT | + |
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Preference number: 5 (lower is better) Translates to: TQGVSMVCFWRLLSFWLINIETC*PFSVSL Trigger: AAGTGAGACAGAAAATGGCAAGCATGTCTCTATATT...TATAAGCCAGAAAGAAAGTAGTCTCCAGAAACAGACCATGCTGACACCTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS-3UTR CAA 90 bp | TGTTCCACTACAACCCTAGCTTCAGCACACTTGCTATTAGCAGCTACTTCTTTTAATATAGAGACATGCTaGCCATTTTCTGTCTCACTT | + |
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Preference number: 5 (lower is better) Translates to: CSTTTLASAHLLLAATSFNIETC*PFSVSL Trigger: AAGTGAGACAGAAAATGGCAAGCATGTCTCTATATT...AAAAGAAGTAGCTGCTAATAGCAAGTGTGCTGAAGCTAGGGTTGTAGTGGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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| CDS-3UTR CAA 90 bp | CAAAAGTTAAGGACAATGAGCTCATTACCAAGCCAGTTATTGATTCTCTGGTTCTCAAGTCAGAGGAGTTaGCCAAAACTGAATATTACC | + |
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Preference number: 5 (lower is better) Translates to: QKLRTMSSLPSQLLILWFSSQRS*PKLNIT Trigger: GGTAATATTCAGTTTTGGCAAACTCCTCTGACTTGA...GAACCAGAGAATCAATAACTGGCTTGGTAATGAGCTCATTGTCCTTAACTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310850.9 |
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| CDS TCA 72 bp | GCGCAGCCAGGCAGGCCACCGCGGCCAGCTTCAAGCTaGCCCGGTATCCCCGCGGCCGGACCGCCGGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: AQPGRPPRPASS*PGIPAAGPPVS Trigger: TGAGACCGGCGGTCCGGCCGCGGGGATACCGGGTCAGCTTGAAGCTGGCCGCGGTGGCCTGCCTGGCTGCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549850.1 |
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