RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DSTYK (Homo sapiens)

Ensembl gene IDs: ENSG00000133059

Ensembl transcript IDs: ENST00000367161.7, ENST00000367162.8, ENST00000615388.1

Found 645 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGGAACTAAGGTATGCCTGGGGAAACCCCACCCAAATGAGCCATaGCAGACAGCCCTTGCCATCAGCTCTCTAGGCACAGGGTCAGCC +
Preference number: 1 (lower is better)
Translates to: QGTKVCLGKPHPNEP*QTALAISSLGTGSA
Trigger: GGCTGACCCTGTGCCTAGAGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAGGCATACCTTAGTTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CCA 90 bp TCAATGAGCTACTCTTTGCAGAGGATCAGGGAACTAAGGTATGCCTaGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCA +
Preference number: 1 (lower is better)
Translates to: SMSYSLQRIRELRYA*GNPTQMSHARQPLP
Trigger: TGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAGGCATACCTTAGTTCCCTGATCCTCTGCAAAGAGTAGCTCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 90 bp GCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCACTTCTTCCATaGGGAAGAACACTTTGTGACCCTTCTTTGGCAGCTCAAGCAAAG +
Preference number: 1 (lower is better)
Translates to: AVVTLQPCNPEALLP*GRTLCDPSLAAQAK
Trigger: CTTTGCTTGAGCTGCCAAAGAAGGGTCACAAAGTGTTCTTCCTCATGGAAGAAGTGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR GCA 90 bp TCAGTCAATGAGCTACTCTTTGCAGAGGATCAGGGAACTAAGGTATaGCTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTT +
Preference number: 1 (lower is better)
Translates to: SVNELLFAEDQGTKV*LGKPHPNEPCQTAL
Trigger: AAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAGGCATACCTTAGTTCCCTGATCCTCTGCAAAGAGTAGCTCATTGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CCA 90 bp TGCCAGCATGCCCGGCTAATTTGCAACTCATCTTATACACCTACCTaGGGACCTGTTTTACAAACTCTCGGGCTGAACACAGGGGCCAGA +
Preference number: 1 (lower is better)
Translates to: CQHARLICNSSYTPT*GPVLQTLGLNTGAR
Trigger: TCTGGCCCCTGTGTTCAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCAAATTAGCCGGGCATGCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CCA 90 bp AGGCTCTGTCCCCTTGAAGTTGATGGAGTCAAAAGTGACTCTCTTTaGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAG +
Preference number: 1 (lower is better)
Translates to: RLCPLEVDGVKSDSL*SGNNQHSPPEALAQ
Trigger: CTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCACTTTTGACTCCATCAACTTCAAGGGGACAGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR GCA 90 bp GAATATGCTCAGTCATTCAACTCTTCACTGTCCAGGAGTCATCCCTaGCTGGGAAGGTTCCAAGTTTCCCAGCAAGCACCAGTTCCCTTG +
Preference number: 1 (lower is better)
Translates to: EYAQSFNSSLSRSHP*LGRFQVSQQAPVPL
Trigger: CAAGGGAACTGGTGCTTGCTGGGAAACTTGGAACCTTCCCAGGCAGGGATGACTCCTGGACAGTGAAGAGTTGAATGACTGAGCATATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 90 bp GCCCTGCAACCCCGAGGCACTTCTTCCATGAGGAAGAACACTTTGTaGCCCTTCTTTGGCAGCTCAAGCAAAGACACAAGAATGCATTTG +
Preference number: 1 (lower is better)
Translates to: ALQPRGTSSMRKNTL*PFFGSSSKDTRMHL
Trigger: CAAATGCATTCTTGTGTCTTTGCTTGAGCTGCCAAAGAAGGGTCACAAAGTGTTCTTCCTCATGGAAGAAGTGCCTCGGGGTTGCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 90 bp CTGACTGCTCTGCAGGAAGGCCTCTCACTCATTTCTGAAACAAAATaGGAGACCAGACTTCAAGCTCTGGCCATTAAAAATGGCCAGGTC +
Preference number: 1 (lower is better)
Translates to: LTALQEGLSLISETK*ETRLQALAIKNGQV
Trigger: GACCTGGCCATTTTTAATGGCCAGAGCTTGAAGTCTGGTCTCTCATTTTGTTTCAGAAATGAGTGAGAGGCCTTCCTGCAGAGCAGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 90 bp TGTGACCCTTCTTTGGCAGCTCAAGCAAAGACACAAGAATGCATTTaGGAGCTGACAGGTACTAGTCGAGAGTTCTATGAGTCCCCTATT +
Preference number: 1 (lower is better)
Translates to: CDPSLAAQAKTQECI*ELTGTSREFYESPI
Trigger: AATAGGGGACTCATAGAACTCTCGACTAGTACCTGTCAGCTCTCAAATGCATTCTTGTGTCTTTGCTTGAGCTGCCAAAGAAGGGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 90 bp CTACTCTTTTGGCAGTGGACTCTTCCAGGGTTGTTAATCCCACTCTaGCACAATATGGATGGACTAGGGAGGCTTCCTGATTATCCAAAT +
Preference number: 1 (lower is better)
Translates to: LLFWQWTLPGLLIPL*HNMDGLGRLPDYPN
Trigger: ATTTGGATAATCAGGAAGCCTCCCTAGTCCATCCATATTGTGTCAGAGTGGGATTAACAACCCTGGAAGAGTCCACTGCCAAAAGAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 90 bp GTTAATCCCACTCTGACACAATATGGATGGACTAGGGAGGCTTCCTaGTTATCCAAATGGAATACCAAGCATGCCATCATCTCTCCAAAG +
Preference number: 1 (lower is better)
Translates to: VNPTLTQYGWTREAS*LSKWNTKHAIISPK
Trigger: CTTTGGAGAGATGATGGCATGCTTGGTATTCCATTTGGATAATCAGGAAGCCTCCCTAGTCCATCCATATTGTGTCAGAGTGGGATTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 90 bp CTTCTTTGGCAGCTCAAGCAAAGACACAAGAATGCATTTGAGAGCTaGCAGGTACTAGTCGAGAGTTCTATGAGTCCCCTATTTCTATCT +
Preference number: 1 (lower is better)
Translates to: LLWQLKQRHKNAFES*QVLVESSMSPLFLS
Trigger: AGATAGAAATAGGGGACTCATAGAACTCTCGACTAGTACCTGTCAGCTCTCAAATGCATTCTTGTGTCTTTGCTTGAGCTGCCAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR GCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTATGATCTCGGCTCACTaGAACCTCCGCCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: LGKPHPNEPCQTALAISSMISAH*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATCAT...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR GCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGCTGGGATTACTGGTaGGTGCCAGCATGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLSWDYW*VPACPA
Trigger: AGCCGGGCATGCTGGCACGCACCAGTAATCCCAGCT...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTGCTAAAGGGATAGCTTaGCGCTTCAGTGAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: LGKPHPNEPCQTALAISSAKGIA*RFSELL
Trigger: CAGCAGCTCACTGAAGCGCCAAGCTATCCCTTTAGC...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAGATCTCGGCTCACCATaGCCTCTGCCTCCCGGGTTC +
Preference number: 2 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEADLGSP*PLPPGF
Trigger: GAACCCGGGAGGCAGAGGTCATGGTGAGCCGAGATC...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR GCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGGTCACTTTGCAGCCCTaGAACCCCGAGGCACTTCTT +
Preference number: 2 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLVTLQP*NPEALL
Trigger: AAGAAGTGCCTCGGGGTTGCAGGGCTGCAAAGTGAC...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CAA 90 bp CAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAATGAGCTACTCTTaGCAGAGGATCAGGGAACTAAGGTATGCCTGGGGAAACCCCACC +
Preference number: 2 (lower is better)
Translates to: QHSPPEALAQSMSYS*QRIRELRYAWGNPT
Trigger: GGTGGGGTTTCCCCAGGCATACCTTAGTTCCCTGATCCTCTGCAAAGAGTAGCTCATTGACTGAGCAAGCGCTTCAGGAGGACTGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGAGCTTGGCGCTTCAGTaGGCTGCTGAATATGCTCAG +
Preference number: 2 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLSLALQ*AAEYAQ
Trigger: CTGAGCATATTCAGCAGCTCACTGAAGCGCCAAGCT...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCATGGCCAGGCTGCTCTTaGACTCTGGACCTTGTGATC +
Preference number: 2 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSWPGCS*TLDLVI
Trigger: GATCACAAGGTCCAGAGTTCAAGAGCAGCCTGGCCA...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGGATCTCGGCTCACCATaGCCTCTGCCTCCCGGGTTC +
Preference number: 2 (lower is better)
Translates to: HAEPSITQVLPDFFENLVDLGSP*PLPPGF
Trigger: GAACCCGGGAGGCAGAGGTCATGGTGAGCCGAGATC...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTGCTTCAGTGAGCTGCTaGATATGCTCAGTCATTCAA +
Preference number: 2 (lower is better)
Translates to: LGKPHPNEPCQTALAISSASVSC*ICSVIQ
Trigger: TTGAATGACTGAGCATATTCAGCAGCTCACTGAAGC...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTCCTCCTTTTCATTTGTaGAGCCAGAACACCACATTC +
Preference number: 2 (lower is better)
Translates to: LGKPHPNEPCQTALAISSPPFHL*SQNTTF
Trigger: GAATGTGGTGTTCTGGCTTCACAAATGAAAAGGAGG...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGCTCAAGCACACTTCATaGGGAACCCTCCAAAAGACC +
Preference number: 2 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLLKHTS*GTLQKT
Trigger: GGTCTTTTGGAGGGTTCCTCATGAAGTGTGCTTGAG...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR GCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGTTCAAGCGATTCTCCTaGCTCAGCCTCCTGAGTATC +
Preference number: 2 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLFKRFS*LSLLSI
Trigger: GATACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAA...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR GCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTCAGGGAACTAAGGTATaGCTGGGGAAACCCCACCCA +
Preference number: 2 (lower is better)
Translates to: LQESLEYKCLKATPSLPTQGTKV*LGKPHP
Trigger: TGGGTGGGGTTTCCCCAGGCATACCTTAGTTCCCTG...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCCCAGACCACAGTTATTaGGGATTAGGCAGATGGAGG +
Preference number: 2 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLPDHSY*GLGRWR
Trigger: CCTCCATCTGCCTAATCCCCAATAACTGTGGTCTGG...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCACTCAAGCACACTTCATaGGGAACCCTCCAAAAGACC +
Preference number: 2 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSLKHTS*GTLQKT
Trigger: GGTCTTTTGGAGGGTTCCTCATGAAGTGTGCTTGAG...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCATGGACCAGTTTGGTTaGGGAAGGCTTGAAGTCAAG +
Preference number: 2 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLMDQFG*GRLEVK
Trigger: CTTGACTTCAAGCCTTCCTCAACCAAACTGGTCCAT...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTTATGTGGACTTTGGCTaGCCTAGAGACTTTCAAGAA +
Preference number: 2 (lower is better)
Translates to: LGKPHPNEPCQTALAISSYVDFG*PRDFQE
Trigger: TTCTTGAAAGTCTCTAGGCCAGCCAAAGTCCACATA...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTACTGACCATTGCAACCTaGGATACCTGGCTGCAGACA +
Preference number: 2 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLLTIAT*DTWLQT
Trigger: TGTCTGCAGCCAGGTATCTCAGGTTGCAATGGTCAG...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAACACACTGGCACTATaGGGAACAGATAGCTCTGTT +
Preference number: 2 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLNTLAL*GTDSSV
Trigger: AACAGAGCTATCTGTTCCTCATAGTGCCAGTGTGTT...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGCCTGCCTCAGCCTCCTaGGTATCTTGGATTACAGGC +
Preference number: 2 (lower is better)
Translates to: HAEPSITQVLPDFFENLVPASAS*VSWITG
Trigger: GCCTGTAATCCAAGATACTCAGGAGGCTGAGGCAGG...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTTGGGGATTAGGCAGATaGAGGGAGACTACTCACTTC +
Preference number: 2 (lower is better)
Translates to: LQESLEYKCLKATPSLPTWGLGR*RETTHF
Trigger: GAAGTGAGTAGTCTCCCTCCATCTGCCTAATCCCCA...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGCAGCAAACTAAGCCGTaGGGTAAACTAAAAAGGGAC +
Preference number: 2 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLQQTKP*GKLKRD
Trigger: GTCCCTTTTTAGTTTACCCCACGGCTTAGTTTGCTG...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCCCAAATATCCATATGTaGACTTTGGCTGGCCTAGAG +
Preference number: 2 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLPNIHM*TLAGLE
Trigger: CTCTAGGCCAGCCAAAGTCCACATATGGATATTTGG...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGCCAAATATCCATATGTaGACTTTGGCTGGCCTAGAG +
Preference number: 2 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLPNIHM*TLAGLE
Trigger: CTCTAGGCCAGCCAAAGTCCACATATGGATATTTGG...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CAA 90 bp CCCTGCCTGGGAAGGTTCCAAGTTTCCCAGCAAGCACCAGTTCCCTaGGGAGTGTGTCCTATAGTGAATAAATGTCAAATTCTCCCCATG +
Preference number: 2 (lower is better)
Translates to: PCLGRFQVSQQAPVP*GVCPIVNKCQILPM
Trigger: CATGGGGAGAATTTGACATTTATTCACTATAGGACACACTCCCAAGGGAACTGGTGCTTGCTGGGAAACTTGGAACCTTCCCAGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGTACAAACTCTCGGGCTaGACACAGGGGCCAGACCAC +
Preference number: 2 (lower is better)
Translates to: INPESHLFKMHTIKTVLLYKLSG*TQGPDH
Trigger: GTGGTCTGGCCCCTGTGTTCAGCCCGAGAGTTTGTA...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCACGCTTGCTCAGTCAATaGGCTACTCTTTGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEARLLSQ*ATLCRG
Trigger: TCCTCTGCAAAGAGTAGCTCATTGACTGAGCAAGCG...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR GCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGGTGCAGTTGTCACTTTaGAGCCCTGCAACCCCGAGG +
Preference number: 2 (lower is better)
Translates to: INPESHLFKMHTIKTVLLVQLSL*SPATPR
Trigger: CCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCAC...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCTACTTCGCATTGGGTTaGTTTTGCTTAGACACTCAC +
Preference number: 2 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLYFALG*FCLDTH
Trigger: GTGAGTGTCTAAGCAAAACCAACCCAATGCGAAGTA...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGTACTTCGCATTGGGTTaGTTTTGCTTAGACACTCAC +
Preference number: 2 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLYFALG*FCLDTH
Trigger: GTGAGTGTCTAAGCAAAACCAACCCAATGCGAAGTA...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCATCTCACCTCACCACTTaGGAACACATACAACCAAAG +
Preference number: 2 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSSHLTT*EHIQPK
Trigger: CTTTGGTTGTATGTGTTCCCAAGTGGTGAGGTGAGA...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGCCTGCCTCAGCCTCCTaGGTATCTTGGATTACAGGC +
Preference number: 2 (lower is better)
Translates to: INPESHLFKMHTIKTVLLPASAS*VSWITG
Trigger: GCCTGTAATCCAAGATACTCAGGAGGCTGAGGCAGG...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTACTAGGGAGGCTTCCTaGTTATCCAAATGGAATACC +
Preference number: 2 (lower is better)
Translates to: LQESLEYKCLKATPSLPTTREAS*LSKWNT
Trigger: GGTATTCCATTTGGATAATCAGGAAGCCTCCCTAGT...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGCTGACCATTGCAACCTaGGATACCTGGCTGCAGACA +
Preference number: 2 (lower is better)
Translates to: INPESHLFKMHTIKTVLLLTIAT*DTWLQT
Trigger: TGTCTGCAGCCAGGTATCTCAGGTTGCAATGGTCAG...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCACTAGCACACAGGGGTaGGGGGCACACACAGAACTA +
Preference number: 2 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPTSTQG*GAHTEL
Trigger: TAGTTCTGTGTGTGCCCCTCACCCCTGTGTGCTAGT...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGATGGACCAGTTTGGTTaGGGAAGGCTTGAAGTCAAG +
Preference number: 2 (lower is better)
Translates to: HAEPSITQVLPDFFENLVMDQFG*GRLEVK
Trigger: CTTGACTTCAAGCCTTCCTCAACCAAACTGGTCCAT...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAAATGCATTTGAGAGCTaGCAGGTACTAGTCGAGAGT +
Preference number: 2 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEANAFES*QVLVES
Trigger: ACTCTCGACTAGTACCTGTCAGCTCTCAAATGCATT...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR GCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCACTGCAGTGTCCCGCTTaGTGTCTTAGAAGTATATAC +
Preference number: 2 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEALQCPA*CLRSIY
Trigger: GTATATACTTCTAAGACAGCAAGCGGGACACTGCAG...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR GCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGACCATTTCTCCTGACTaGTCTGCAGGAAGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: INPESHLFKMHTIKTVLLTISPD*SAGRPL
Trigger: GAGAGGCCTTCCTGCAGAGCAGTCAGGAGAAATGGT...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAAAGTACCATGTTATCTaGAGCTTTCCCACTTTGAGA +
Preference number: 2 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSKYHVI*SFPTLR
Trigger: TCTCAAAGTGGGAAAGCTCCAGATAACATGGTACTT...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCACAGCAAACTAAGCCGTaGGGTAAACTAAAAAGGGAC +
Preference number: 2 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAQQTKP*GKLKRD
Trigger: GTCCCTTTTTAGTTTACCCCACGGCTTAGTTTGCTG...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CAA 90 bp AACCCTTTTAGGAACAGTAGTGCTACTGGAAACCTCCAGGAGAGTTaGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTTTA +
Preference number: 2 (lower is better)
Translates to: NPFRNSSATGNLQES*EYKCLKATPSLPTL
Trigger: TAAAGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAGGTTTCCAGTAGCACTACTGTTCCTAAAAGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGGCTTCAGTGAGCTGCTaGATATGCTCAGTCATTCAA +
Preference number: 2 (lower is better)
Translates to: HAEPSITQVLPDFFENLVASVSC*ICSVIQ
Trigger: TTGAATGACTGAGCATATTCAGCAGCTCACTGAAGC...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGTGGAGTGCAGTGGCGTaGTCTCGGCTCACCATGACC +
Preference number: 2 (lower is better)
Translates to: PFNITLMKINPESHLFKMWSAVA*SRLTMT
Trigger: GGTCATGGTGAGCCGAGATCACGCCACTGCACTCCA...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR GCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCTCCAGGAGTCATCCCTaGCTGGGAAGGTTCCAAGTT +
Preference number: 2 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPSRSHP*LGRFQV
Trigger: AACTTGGAACCTTCCCAGGCAGGGATGACTCCTGGA...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR GCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGATTAGGAGAATCTGCTaGCTAGGCTCTGTCCCCTTG +
Preference number: 2 (lower is better)
Translates to: INPESHLFKMHTIKTVLLIRRIC*LGSVPL
Trigger: CAAGGGGACAGAGCCTAGGCAGCAGATTCTCCTAAT...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCGCTAAAGGGATAGCTTaGCGCTTCAGTGAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPAKGIA*RFSELL
Trigger: CAGCAGCTCACTGAAGCGCCAAGCTATCCCTTTAGC...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CAA 90 bp TCCCACCTCTCAGTTCTCACCCAAATACTTCGCATTGGGTTGGTTTaGCTTAGACACTCACTCCTAAGTACCATGTTATCTGGAGCTTTC +
Preference number: 2 (lower is better)
Translates to: SHLSVLTQILRIGLV*LRHSLLSTMLSGAF
Trigger: GAAAGCTCCAGATAACATGGTACTTAGGAGTGAGTGTCTAAGCAAAACCAACCCAATGCGAAGTATTTGGGTGAGAACTGAGAGGTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTTGGCCAGGCTGCTCTTaGACTCTGGACCTTGTGATC +
Preference number: 2 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLWPGCS*TLDLVI
Trigger: GATCACAAGGTCCAGAGTTCAAGAGCAGCCTGGCCA...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGTGCTCAAACATATCATaGTCAGAGCCCAGGATAGCC +
Preference number: 2 (lower is better)
Translates to: INPESHLFKMHTIKTVLLCSNIS*SEPRIA
Trigger: GGCTATCCTGGGCTCTGATCATGATATGTTTGAGCA...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCTTACCCCTCCTTTCTTaGCACCTGACTCCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPLPLLS*HLTPLK
Trigger: CTTCAAGGGAGTCAGGTGTCAAGAAAGGAGGGGTAA...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTATTTCTGAAACAAAATaGGAGACCAGACTTCAAGCT +
Preference number: 2 (lower is better)
Translates to: LQESLEYKCLKATPSLPTISETK*ETRLQA
Trigger: AGCTTGAAGTCTGGTCTCTCATTTTGTTTCAGAAAT...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR GCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTCCTGAGATACCTGGCTaGAGACAGCAGGAACCAGAC +
Preference number: 2 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLPEIPG*RQQEPD
Trigger: GTCTGGTTCCTGCTGTCTGCAGCCAGGTATCTCAGG...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTGGAGTCATCCCTGCCTaGGAAGGTTCCAAGTTTCCC +
Preference number: 2 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLGVIPA*EGSKFP
Trigger: GGGAAACTTGGAACCTTCCCAGGCAGGGATGACTCC...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CAA 90 bp ATCATCTCCCACCTCTCAGTTCTCACCCAAATACTTCGCATTGGGTaGGTTTTGCTTAGACACTCACTCCTAAGTACCATGTTATCTGGA +
Preference number: 2 (lower is better)
Translates to: IISHLSVLTQILRIG*VLLRHSLLSTMLSG
Trigger: TCCAGATAACATGGTACTTAGGAGTGAGTGTCTAAGCAAAACCAACCCAATGCGAAGTATTTGGGTGAGAACTGAGAGGTGGGAGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACTACAAACTCTCGGGCTaGACACAGGGGCCAGACCAC +
Preference number: 2 (lower is better)
Translates to: SITYNKNGCQRTKPKLADYKLSG*TQGPDH
Trigger: GTGGTCTGGCCCCTGTGTTCAGCCCGAGAGTTTGTA...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR GCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTTCCAGGAGTCATCCCTaGCTGGGAAGGTTCCAAGTT +
Preference number: 2 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLSRSHP*LGRFQV
Trigger: AACTTGGAACCTTCCCAGGCAGGGATGACTCCTGGA...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR GCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGATACACACGTATACCTaGACTCAGCCTGCTGAGTAT +
Preference number: 2 (lower is better)
Translates to: INPESHLFKMHTIKTVLLIHTYT*TQPAEY
Trigger: ATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTAT...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGGGAGTCATCCCTGCCTaGGAAGGTTCCAAGTTTCCC +
Preference number: 2 (lower is better)
Translates to: PFNITLMKINPESHLFKMGVIPA*EGSKFP
Trigger: GGGAAACTTGGAACCTTCCCAGGCAGGGATGACTCC...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCTTTGTACATAGGCCATaGCCTCCAATCATCTCCCAC +
Preference number: 2 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPFVHRP*PPIISH
Trigger: GTGGGAGATGATTGGAGGCCATGGCCTATGTACAAA...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCAACACACTGGCACTATaGGGAACAGATAGCTCTGTT +
Preference number: 2 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPNTLAL*GTDSSV
Trigger: AACAGAGCTATCTGTTCCTCATAGTGCCAGTGTGTT...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACACTAGCACACAGGGGTaGGGGGCACACACAGAACTA +
Preference number: 2 (lower is better)
Translates to: SITYNKNGCQRTKPKLADTSTQG*GAHTEL
Trigger: TAGTTCTGTGTGTGCCCCTCACCCCTGTGTGCTAGT...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGACACAAGAATGCATTTaGGAGCTGACAGGTACTAGT +
Preference number: 2 (lower is better)
Translates to: INPESHLFKMHTIKTVLLTQECI*ELTGTS
Trigger: ACTAGTACCTGTCAGCTCTCAAATGCATTCTTGTGT...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTCCAGACCACAGTTATTaGGGATTAGGCAGATGGAGG +
Preference number: 2 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLPDHSY*GLGRWR
Trigger: CCTCCATCTGCCTAATCCCCAATAACTGTGGTCTGG...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACAGCTTGGCGCTTCAGTaGGCTGCTGAATATGCTCAG +
Preference number: 2 (lower is better)
Translates to: SITYNKNGCQRTKPKLADSLALQ*AAEYAQ
Trigger: CTGAGCATATTCAGCAGCTCACTGAAGCGCCAAGCT...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGGCTGCCAGACTTCTTTaGAAACCTAGTGTCCTCCCA +
Preference number: 2 (lower is better)
Translates to: PFNITLMKINPESHLFKMAARLL*KPSVLP
Trigger: TGGGAGGACACTAGGTTTTCAAAGAAGTCTGGCAGC...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCTATGTGGACTTTGGCTaGCCTAGAGACTTTCAAGAA +
Preference number: 2 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPYVDFG*PRDFQE
Trigger: TTCTTGAAAGTCTCTAGGCCAGCCAAAGTCCACATA...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACTTACCCCTCCTTTCTTaGCACCTGACTCCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: SITYNKNGCQRTKPKLADLPLLS*HLTPLK
Trigger: CTTCAAGGGAGTCAGGTGTCAAGAAAGGAGGGGTAA...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR GCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACTTCAAGCGATTCTCCTaGCTCAGCCTCCTGAGTATC +
Preference number: 2 (lower is better)
Translates to: SITYNKNGCQRTKPKLADFKRFS*LSLLSI
Trigger: GATACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAA...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGTTTGTACATAGGCCATaGCCTCCAATCATCTCCCAC +
Preference number: 2 (lower is better)
Translates to: PFNITLMKINPESHLFKMFVHRP*PPIISH
Trigger: GTGGGAGATGATTGGAGGCCATGGCCTATGTACAAA...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACTGGGGATTAGGCAGATaGAGGGAGACTACTCACTTC +
Preference number: 2 (lower is better)
Translates to: SITYNKNGCQRTKPKLADWGLGR*RETTHF
Trigger: GAAGTGAGTAGTCTCCCTCCATCTGCCTAATCCCCA...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGACATACAACCAAAGCTaGGAGGTAAAATCTTTAGGA +
Preference number: 2 (lower is better)
Translates to: INPESHLFKMHTIKTVLLTYNQS*EVKSLG
Trigger: TCCTAAAGATTTTACCTCCCAGCTTTGGTTGTATGT...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACTGCTCAAACATATCATaGTCAGAGCCCAGGATAGCC +
Preference number: 2 (lower is better)
Translates to: SITYNKNGCQRTKPKLADCSNIS*SEPRIA
Trigger: GGCTATCCTGGGCTCTGATCATGATATGTTTGAGCA...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR GCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGCTGCAGTGTCCCGCTTaGTGTCTTAGAAGTATATAC +
Preference number: 2 (lower is better)
Translates to: PFNITLMKINPESHLFKMLQCPA*CLRSIY
Trigger: GTATATACTTCTAAGACAGCAAGCGGGACACTGCAG...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGAGAGAGGATAAAGACTaGAGTGTGTGCCAAAGTCAT +
Preference number: 2 (lower is better)
Translates to: PFNITLMKINPESHLFKMREDKD*SVCQSH
Trigger: ATGACTTTGGCACACACTTCAGTCTTTATCCTCTCT...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGCCTCCCATATGTGAATaGGAGTATGAGCTAATACTT +
Preference number: 2 (lower is better)
Translates to: PFNITLMKINPESHLFKMPPICE*EYELIL
Trigger: AAGTATTAGCTCATACTCTCATTCACATATGGGAGG...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGTCTTATACACCTACCTaGGGACCTGTTTTACAAACT +
Preference number: 2 (lower is better)
Translates to: PFNITLMKINPESHLFKMSYTPT*GPVLQT
Trigger: AGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGA...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGGCTGTAACAATATTATaGAAAGAGCCAGGTAGCACA +
Preference number: 2 (lower is better)
Translates to: PFNITLMKINPESHLFKMAVTIL*KEPGST
Trigger: TGTGCTACCTGGCTCTTTCCATAATATTGTTACAGC...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACAGAGCCCAAAGACACTaGGTCAGTTACTTTATCATT +
Preference number: 2 (lower is better)
Translates to: SITYNKNGCQRTKPKLADRAQRH*VSYFII
Trigger: AATGATAAAGTAACTGACTCAGTGTCTTTGGGCTCT...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR TCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACCCTCCCATATGTGAATaGGAGTATGAGCTAATACTT +
Preference number: 2 (lower is better)
Translates to: SITYNKNGCQRTKPKLADPPICE*EYELIL
Trigger: AAGTATTAGCTCATACTCTCATTCACATATGGGAGG...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTGCCAGACCACAGTTATaGGGGATTAGGCAGATGGAG +
Preference number: 3 (lower is better)
Translates to: LGKPHPNEPCQTALAISSARPQL*GIRQME
Trigger: CTCCATCTGCCTAATCCCCAATAACTGTGGTCTGGC...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTCTTACCCCTCCTTTCTaGACACCTGACTCCCTTGAA +
Preference number: 3 (lower is better)
Translates to: LGKPHPNEPCQTALAISSLTPPF*TPDSLE
Trigger: TTCAAGGGAGTCAGGTGTCAAGAAAGGAGGGGTAAG...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCTTGGCCAGGCTGCTCTaGAACTCTGGACCTTGTGAT +
Preference number: 3 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLLARLL*NSGPCD
Trigger: ATCACAAGGTCCAGAGTTCAAGAGCAGCCTGGCCAA...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR GCA 72 bp GAGCTACTCTTTGCAGAGGATCAGGGAACTAAGGTATaGCTGGGGAAACCCCACCCAAATGAGCCATGCCAG +
Preference number: 3 (lower is better)
Translates to: ELLFAEDQGTKV*LGKPHPNEPCQ
Trigger: CTGGCATGGCTCATTTGGGTGGGGTTTCCCCAGGCATACCTTAGTTCCCTGATCCTCTGCAAAGAGTAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCCTTACCCCTCCTTTCTaGACACCTGACTCCCTTGAA +
Preference number: 3 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLLTPPF*TPDSLE
Trigger: TTCAAGGGAGTCAGGTGTCAAGAAAGGAGGGGTAAG...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTGCTGCCCTAATTATGTaGATTAGAAGGACAGACCAC +
Preference number: 3 (lower is better)
Translates to: LGKPHPNEPCQTALAISSAALIM*IRRTDH
Trigger: GTGGTCTGTCCTTCTAATCAACATAATTAGGGCAGC...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 72 bp TTTCAGGGAAACTTCCCAGACACTAGCACACAGGGGTaGGGGGCACACACAGAACTACCAGAGGAGGGTTTT +
Preference number: 3 (lower is better)
Translates to: FQGNFPDTSTQG*GAHTELPEEGF
Trigger: AAAACCCTCCTCTGGTAGTTCTGTGTGTGCCCCTCACCCCTGTGTGCTAGTGTCTGGGAAGTTTCCCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 72 bp ACTTTGCAGCCCTGCAACCCCGAGGCACTTCTTCCATaGGGAAGAACACTTTGTGACCCTTCTTTGGCAGCT +
Preference number: 3 (lower is better)
Translates to: TLQPCNPEALLP*GRTLCDPSLAA
Trigger: AGCTGCCAAAGAAGGGTCACAAAGTGTTCTTCCTCATGGAAGAAGTGCCTCGGGGTTGCAGGGCTGCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CCA 72 bp CAGGGGCCAGACCACAGTTATTGGGGATTAGGCAGATaGAGGGAGACTACTCACTTCCACTGTCTACTTCCT +
Preference number: 3 (lower is better)
Translates to: QGPDHSYWGLGR*RETTHFHCLLP
Trigger: AGGAAGTAGACAGTGGAAGTGAGTAGTCTCCCTCCATCTGCCTAATCCCCAATAACTGTGGTCTGGCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CCA 72 bp TACTCTTTGCAGAGGATCAGGGAACTAAGGTATGCCTaGGGAAACCCCACCCAAATGAGCCATGCCAGACAG +
Preference number: 3 (lower is better)
Translates to: YSLQRIRELRYA*GNPTQMSHARQ
Trigger: CTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAGGCATACCTTAGTTCCCTGATCCTCTGCAAAGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTTTGGCCAGGCTGCTCTaGAACTCTGGACCTTGTGAT +
Preference number: 3 (lower is better)
Translates to: LQESLEYKCLKATPSLPTLARLL*NSGPCD
Trigger: ATCACAAGGTCCAGAGTTCAAGAGCAGCCTGGCCAA...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCCGCATTGGGTTGGTTTaGCTTAGACACTCACTCCTA +
Preference number: 3 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLRIGLV*LRHSLL
Trigger: TAGGAGTGAGTGTCTAAGCAAAACCAACCCAATGCG...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTACAAGCACCAGTTCCCTaGGGAGTGTGTCCTATAGTG +
Preference number: 3 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLQAPVP*GVCPIV
Trigger: CACTATAGGACACACTCCCAAGGGAACTGGTGCTTG...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTAAAAGAAGGAACAAATaGCGGGAGAAATCGTGGTTA +
Preference number: 3 (lower is better)
Translates to: LGKPHPNEPCQTALAISSKRRNK*REKSWL
Trigger: TAACCACGATTTCTCCCGCAATTTGTTCCTTCTTTT...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAGCCAGACCACAGTTATaGGGGATTAGGCAGATGGAG +
Preference number: 3 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAARPQL*GIRQME
Trigger: CTCCATCTGCCTAATCCCCAATAACTGTGGTCTGGC...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAGCATGCCCGGCTAATTaGCAACTCATCTTATACACC +
Preference number: 3 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSACPAN*QLILYT
Trigger: GGTGTATAAGATGAGTTGCAAATTAGCCGGGCATGC...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGTCTGTCCCCTTGAAGTaGATGGAGTCAAAAGTGACT +
Preference number: 3 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLSVPLK*MESKVT
Trigger: AGTCACTTTTGACTCCATCAACTTCAAGGGGACAGA...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 72 bp CTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTaGAGCGCTTGCTCAGTCAATGAGCTACTCTTTGCA +
Preference number: 3 (lower is better)
Translates to: LSLVWEQPAQSS*SACSVNELLFA
Trigger: TGCAAAGAGTAGCTCATTGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCATACTTCGCATTGGGTaGGTTTTGCTTAGACACTCA +
Preference number: 3 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLILRIG*VLLRHS
Trigger: TGAGTGTCTAAGCAAAACCAACCCAATGCGAAGTAT...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 72 bp CCCCGAGGCACTTCTTCCATGAGGAAGAACACTTTGTaGCCCTTCTTTGGCAGCTCAAGCAAAGACACAAGA +
Preference number: 3 (lower is better)
Translates to: PRGTSSMRKNTL*PFFGSSSKDTR
Trigger: TCTTGTGTCTTTGCTTGAGCTGCCAAAGAAGGGTCACAAAGTGTTCTTCCTCATGGAAGAAGTGCCTCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 72 bp TGGCAGTGGACTCTTCCAGGGTTGTTAATCCCACTCTaGCACAATATGGATGGACTAGGGAGGCTTCCTGAT +
Preference number: 3 (lower is better)
Translates to: WQWTLPGLLIPL*HNMDGLGRLPD
Trigger: ATCAGGAAGCCTCCCTAGTCCATCCATATTGTGTCAGAGTGGGATTAACAACCCTGGAAGAGTCCACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR GCA 72 bp GGAGGCTTCCTGATTATCCAAATGGAATACCAAGCATaGCATCATCTCTCCAAAGCAAGCCCAAAGGGGGCT +
Preference number: 3 (lower is better)
Translates to: GGFLIIQMEYQA*HHLSKASPKGA
Trigger: AGCCCCCTTTGGGCTTGCTTTGGAGAGATGATGGCATGCTTGGTATTCCATTTGGATAATCAGGAAGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAATACTTCGCATTGGGTaGGTTTTGCTTAGACACTCA +
Preference number: 3 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSILRIG*VLLRHS
Trigger: TGAGTGTCTAAGCAAAACCAACCCAATGCGAAGTAT...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 72 bp TTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTaGCACCTGACTCCCTTGAAGCCCCATCATAGTTCC +
Preference number: 3 (lower is better)
Translates to: FPASREYLPLLS*HLTPLKPHHSS
Trigger: GGAACTATGATGGGGCTTCAAGGGAGTCAGGTGTCAAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CCA 72 bp GCCCGGCTAATTTGCAACTCATCTTATACACCTACCTaGGGACCTGTTTTACAAACTCTCGGGCTGAACACA +
Preference number: 3 (lower is better)
Translates to: ARLICNSSYTPT*GPVLQTLGLNT
Trigger: TGTGTTCAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCAAATTAGCCGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGCAAGCACCAGTTCCCTaGGGAGTGTGTCCTATAGTG +
Preference number: 3 (lower is better)
Translates to: INPESHLFKMHTIKTVLLQAPVP*GVCPIV
Trigger: CACTATAGGACACACTCCCAAGGGAACTGGTGCTTG...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGGCATGCCCGGCTAATTaGCAACTCATCTTATACACC +
Preference number: 3 (lower is better)
Translates to: HAEPSITQVLPDFFENLVACPAN*QLILYT
Trigger: GGTGTATAAGATGAGTTGCAAATTAGCCGGGCATGC...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGGAAAATCCAAAAGCTTaGGAAATTCCAGGAAAGCAA +
Preference number: 3 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLENPKA*EIPGKQ
Trigger: TTGCTTTCCTGGAATTTCCAAAGCTTTTGGATTTTC...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 72 bp AGCTGGGAGGTAAAATCTTTAGGACTTTGGTCATGCTaGGCCCTCTATAACCCAAGTGCTGCCAGACTTCTT +
Preference number: 3 (lower is better)
Translates to: SWEVKSLGLWSC*ALYNPSAARLL
Trigger: AAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATGACCAAAGTCCTAAAGATTTTACCTCCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTGTGGTTAAAAGCTCATaGATCAAGTTTTCCAAACGT +
Preference number: 3 (lower is better)
Translates to: LQESLEYKCLKATPSLPTVVKSS*IKFSKR
Trigger: ACGTTTGGAAAACTTGATCAATGAGCTTTTAACCAC...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGGCACCAATATTTAAATaGTTCCCCTTCCTCTGCCTA +
Preference number: 3 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLAPIFK*FPFLCL
Trigger: TAGGCAGAGGAAGGGGAACAATTTAAATATTGGTGC...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGGCACCAATATTTAAATaGTTCCCCTTCCTCTGCCTA +
Preference number: 3 (lower is better)
Translates to: HAEPSITQVLPDFFENLVAPIFK*FPFLCL
Trigger: TAGGCAGAGGAAGGGGAACAATTTAAATATTGGTGC...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGGCTGCCCTAATTATGTaGATTAGAAGGACAGACCAC +
Preference number: 3 (lower is better)
Translates to: INPESHLFKMHTIKTVLLAALIM*IRRTDH
Trigger: GTGGTCTGTCCTTCTAATCAACATAATTAGGGCAGC...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 72 bp TCTTTGGCAGCTCAAGCAAAGACACAAGAATGCATTTaGGAGCTGACAGGTACTAGTCGAGAGTTCTATGAG +
Preference number: 3 (lower is better)
Translates to: SLAAQAKTQECI*ELTGTSREFYE
Trigger: CTCATAGAACTCTCGACTAGTACCTGTCAGCTCTCAAATGCATTCTTGTGTCTTTGCTTGAGCTGCCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CCA 72 bp AAAGCTTTGGAAATTCCAGGAAAGCAACTACTCTTTTaGCAGTGGACTCTTCCAGGGTTGTTAATCCCACTC +
Preference number: 3 (lower is better)
Translates to: KALEIPGKQLLF*QWTLPGLLIPL
Trigger: GAGTGGGATTAACAACCCTGGAAGAGTCCACTGCCAAAAGAGTAGTTGCTTTCCTGGAATTTCCAAAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCTTTCTTCCAGTATGTTaGTACATAGGCCATGGCCTC +
Preference number: 3 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPFLPVC*YIGHGL
Trigger: GAGGCCATGGCCTATGTACAAACATACTGGAAGAAA...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGAAAATCTTTAGGACTTaGGTCATGCTGAGCCCTCTA +
Preference number: 3 (lower is better)
Translates to: INPESHLFKMHTIKTVLLKIFRT*VMLSPL
Trigger: TAGAGGGCTCAGCATGACCAAAGTCCTAAAGATTTT...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGAAAAGAAGGAACAAATaGCGGGAGAAATCGTGGTTA +
Preference number: 3 (lower is better)
Translates to: INPESHLFKMHTIKTVLLKRRNK*REKSWL
Trigger: TAACCACGATTTCTCCCGCAATTTGTTCCTTCTTTT...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTTTTCTTCCAGTATGTTaGTACATAGGCCATGGCCTC +
Preference number: 3 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLFLPVC*YIGHGL
Trigger: GAGGCCATGGCCTATGTACAAACATACTGGAAGAAA...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGCTAGGCTCTGTCCCCTaGAAGTTGATGGAGTCAAAA +
Preference number: 3 (lower is better)
Translates to: PFNITLMKINPESHLFKMLGSVP*KLMESK
Trigger: TTTTGACTCCATCAACTTCAAGGGGACAGAGCCTAG...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGCCCAAATACTTCGCATaGGGTTGGTTTTGCTTAGAC +
Preference number: 3 (lower is better)
Translates to: PFNITLMKINPESHLFKMPKYFA*GWFCLD
Trigger: GTCTAAGCAAAACCAACCCAATGCGAAGTATTTGGG...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGTCTGTCCCCTTGAAGTaGATGGAGTCAAAAGTGACT +
Preference number: 3 (lower is better)
Translates to: PFNITLMKINPESHLFKMSVPLK*MESKVT
Trigger: AGTCACTTTTGACTCCATCAACTTCAAGGGGACAGA...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACCCCAAATACTTCGCATaGGGTTGGTTTTGCTTAGAC +
Preference number: 3 (lower is better)
Translates to: SITYNKNGCQRTKPKLADPKYFA*GWFCLD
Trigger: GTCTAAGCAAAACCAACCCAATGCGAAGTATTTGGG...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 72 bp TGTGGTAGTAATGCATTCTTTCCTCCACTGCTTCCTTaGATTTTAGTGTTAAAAATTAGGAGAATCTGCTGC +
Preference number: 3 (lower is better)
Translates to: CGSNAFFPPLLP*ILVLKIRRICC
Trigger: GCAGCAGATTCTCCTAATTTTTAACACTAAAATTCAAGGAAGCAGTGGAGGAAAGAATGCATTACTACCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CCA 72 bp AATAACATCCCCAAATATCCATATGTGGACTTTGGCTaGCCTAGAGACTTTCAAGAATATTTTGCACCTTTT +
Preference number: 3 (lower is better)
Translates to: NNIPKYPYVDFG*PRDFQEYFAPF
Trigger: AAAAGGTGCAAAATATTCTTGAAAGTCTCTAGGCCAGCCAAAGTCCACATATGGATATTTGGGGATGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR-3UTR CAA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACGTGGTTAAAAGCTCATaGATCAAGTTTTCCAAACGT +
Preference number: 3 (lower is better)
Translates to: SITYNKNGCQRTKPKLADVVKSS*IKFSKR
Trigger: ACGTTTGGAAAACTTGATCAATGAGCTTTTAACCAC...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR TCA 72 bp TCAGAGCCCAGGATAGCCAAAGAGTTAAAAGTTATATaGAAGACCCATTATAGACTCCATTTATACTCCATT +
Preference number: 3 (lower is better)
Translates to: SEPRIAKELKVI*KTHYRLHLYSI
Trigger: AATGGAGTATAAATGGAGTCTATAATGGGTCTTTCATATAACTTTTAACTCTTTGGCTATCCTGGGCTCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTGAGGAATCCGCCTCCTaGCGCCCCCGCCTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSEESAS*RPRLQS
Trigger: TGACTGCAGGCGGGGGCGTCAGGAGGCGGATTCCTC...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367162.8
CDS-3UTR CCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGGGGCTCGCTGCCCCATaGCACCCCGTCGCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLGLAAP*HPVALH
Trigger: ATGGAGGGCGACGGGGTGCCATGGGGCAGCGAGCCC...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCGGGCTCGCTGCCCCATaGCACCCCGTCGCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLGLAAP*HPVALH
Trigger: ATGGAGGGCGACGGGGTGCCATGGGGCAGCGAGCCC...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTGATCTCGGCTCACCATaGCCTCTGCCTCCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSDLGSP*PLPPGF
Trigger: GAACCCGGGAGGCAGAGGTCATGGTGAGCCGAGATC...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTACCGAGACGGGCTCGCTaGCCCATGGCACCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLPRRAR*PMAPRR
Trigger: GCGACGGGGTGCCATGGGGCAGCGAGCCCGTCTCGG...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCCTCAGTTGGCCCGCCTaGAGCCCGGTTTCGGCGACA +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLLSWPA*SPVSAT
Trigger: TGTCGCCGAAACCGGGCTGCAGGCGGGCCAACTGAG...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTACCCCGCCGCCGCCCGTaGGGGAGGAGAGACAAGTGT +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLPRRRP*GRRDKC
Trigger: ACACTTGTCTCTCCTCCCTCACGGGCGGCGGCGGGG...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTCCCCACAATGCTGCCTaGCATCATGGCCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSPHNAA*HHGLWL
Trigger: AAGCCAGAGGCCATGATGTCAGGCAGCATTGTGGGG...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCTGCCCAGCTTGGTGGTaGGAAGCACCTGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLCPAWW*EAPAPP
Trigger: TGGGGGTGCAGGTGCTTCCCACCACCAAGCTGGGCA...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGGTGGGCCGGAGGCCTTaGCATGGTGCTACCACAACG +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLVGRRP*HGATTT
Trigger: CGTTGTGGTAGCACCATGCCAAGGCCTCCGGCCCAC...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGCCCCGCCGCCGCCCGTaGGGGAGGAGAGACAAGTGT +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVPRRRP*GRRDKC
Trigger: ACACTTGTCTCTCCTCCCTCACGGGCGGCGGCGGGG...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTCCAATTTGGAGGCGCTaGGGCTCTCAATGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSPIWRR*GSQWLP
Trigger: AGGAAGCCATTGAGAGCCTCAGCGCCTCCAAATTGG...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTTGGCCAGGCTGCTCTTaGACTCTGGACCTTGTGATC +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSWPGCS*TLDLVI
Trigger: GATCACAAGGTCCAGAGTTCAAGAGCAGCCTGGCCA...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGTGGAGTGCAGTGGCGTaGTCTCGGCTCACCATGACC +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLWSAVA*SRLTMT
Trigger: GGTCATGGTGAGCCGAGATCACGCCACTGCACTCCA...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCTGGAGTGCAGTGGCGTaGTCTCGGCTCACCATGACC +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLWSAVA*SRLTMT
Trigger: GGTCATGGTGAGCCGAGATCACGCCACTGCACTCCA...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTTACAGCTCTCCTCACTaGCCAGCTTGGTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSYSSPH*PAWWWE
Trigger: TTCCCACCACCAAGCTGGGCAGTGAGGAGAGCTGTA...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTCGTTTGGGAGTGATCTaGAGGTCCCGCTGCATGTCA +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSRLGVI*RSRCMS
Trigger: TGACATGCAGCGGGACCTGCAGATCACTCCCAAACG...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTGCATGGGCTGGACAATaGCCAAGAGAGGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSAWAGQ*PREASS
Trigger: TGAAGAGGCCTCTCTTGGGCATTGTCCAGCCCATGC...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCCCTCACTGCCCAGCTTaGTGGTGGGAAGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLPHCPA*WWEAPA
Trigger: TGCAGGTGCTTCCCACCACCAAGCTGGGCAGTGAGG...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAGTGGGCCGGAGGCCTTaGCATGGTGCTACCACAACG +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSVGRRP*HGATTT
Trigger: CGTTGTGGTAGCACCATGCCAAGGCCTCCGGCCCAC...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCACAGGGAGCGCCAGGCTaGCCCGAGTCTGAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAQGAPG*PESESH
Trigger: ATGGGACTCAGACTCGGGTCAGCCTGGCGCTCCCTG...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGCCTCGTGGGAACTATTaGGCCGAGTCCGGAATTGGC +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLPRGNY*AESGIG
Trigger: GCCAATTCCGGACTCGGCTCAATAGTTCCCACGAGG...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGCCCCACAATGCTGCCTaGCATCATGGCCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLPHNAA*HHGLWL
Trigger: AAGCCAGAGGCCATGATGTCAGGCAGCATTGTGGGG...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTATGCCTCAGGGAGCTTaGCAGAGCCTGAGCAGATAT +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSMPQGA*QSLSRY
Trigger: ATATCTGCTCAGGCTCTGTCAAGCTCCCTGAGGCAT...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367162.8
CDS-3UTR GCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAGCCCTCCATCGCCTCTaGCCGCTCTGTCTTTGCGGC +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLALHRL*PLCLCG
Trigger: GCCGCAAAGACAGAGCGGGCAGAGGCGATGGAGGGC...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGTCAAGGCAGTGGCAGTaGACCAGGTTCAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLSRQWQ*TRFRAL
Trigger: CAAGGCCCTGAACCTGGTGCACTGCCACTGCCTTGA...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTTCCAGGAGTCATCCCTaGCTGGGAAGGTTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSSRSHP*LGRFQV
Trigger: AACTTGGAACCTTCCCAGGCAGGGATGACTCCTGGA...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGGTGCAGTTGTCACTTTaGAGCCCTGCAACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLVQLSL*SPATPR
Trigger: CCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCAC...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGCTGCCCAGGCTGGAGTaGAGTGGTGTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLLPRLE*SGVILA
Trigger: AGCCAAGATCACACCACTGCACTCCAGCCTGGGCAG...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCACCAGAACATCCACTGTaGGCCGGAGGCCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSPEHPL*AGGLGM
Trigger: CATGCCAAGGCCTCCGGCCCACAGTGGATGTTCTGG...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTCTCTCTGGTGCCTACTaGTTCTCCATTCTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSLSGAY*FSILRD
Trigger: GTCCCTGAGAATGGAGAACCAGTAGGCACCAGAGAG...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGCAGAGTGATGGCAGGTaGGCTCACCCATGTGATGCG +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLQSDGR*AHPCDA
Trigger: CGCATCACATGGGTGAGCCCACCTGCCATCACTCTG...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGCAGGGAGCGCCAGGCTaGCCCGAGTCTGAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLQGAPG*PESESH
Trigger: ATGGGACTCAGACTCGGGTCAGCCTGGCGCTCCCTG...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCATCTTCCATTCCAGAGTaGTGGCAGGTGGGCTCACCC +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSSSIPE*WQVGSP
Trigger: GGGTGAGCCCACCTGCCATCACTCTGGAATGGAAGA...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCATGCAGAGCCGATTCATaGTGCCCTGGAGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSCRADS*CPGAWA
Trigger: AGCCCATGCTCCAGGGCATCATGAATCGGCTCTGCA...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCCCTGCCTCAGCCTCCTaGGTATCTTGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLPASAS*VSWITG
Trigger: GCCTGTAATCCAAGATACTCAGGAGGCTGAGGCAGG...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCATACAAACTCTCGGGCTaGACACAGGGGCCAGACCAC +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSYKLSG*TQGPDH
Trigger: GTGGTCTGGCCCCTGTGTTCAGCCCGAGAGTTTGTA...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGCCAGCACAGTCCTCCTaGAGCGCTTGCTCAGTCAAT +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLPAQSS*SACSVN
Trigger: ATTGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGG...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCCCGAGACGGGCTCGCTaGCCCATGGCACCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPPRRAR*PMAPRR
Trigger: GCGACGGGGTGCCATGGGGCAGCGAGCCCGTCTCGG...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCTTCGGCGACATCGCCTaGAGGGCCGCGCTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPFGDIA*RAALGP
Trigger: GGGGCCGAGCGCGGCCCTGCAGGCGATGTCGCCGAA...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGTACAGCTCTCCTCACTaGCCAGCTTGGTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLYSSPH*PAWWWE
Trigger: TTCCCACCACCAAGCTGGGCAGTGAGGAGAGCTGTA...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAGGATGGTCTCCCAGTTaGCCTGATGAGCAACCAGCG +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSGWSPS*PDEQPA
Trigger: CGCTGGTTGCTCATCAGGGCAACTGGGAGACCATCC...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCGAGGCCTTGGCATGGTaGTACCACAACGTCCACTTC +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLEALAW*YHNVHF
Trigger: GAAGTGGACGTTGTGGTAGCACCATGCCAAGGCCTC...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTAGTTCCAGTGACTGCTaGTCAGATAGCCCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSSSSDC*SDSPGQ
Trigger: TTGACCTGGGCTATCTGAGCAGCAGTCACTGGAACT...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCCGTTTGGGAGTGATCTaGAGGTCCCGCTGCATGTCA +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLRLGVI*RSRCMS
Trigger: TGACATGCAGCGGGACCTGCAGATCACTCCCAAACG...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCCCTGAGATACCTGGCTaGAGACAGCAGGAACCAGAC +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLPEIPG*RQQEPD
Trigger: GTCTGGTTCCTGCTGTCTGCAGCCAGGTATCTCAGG...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTTTGCCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTLPRLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGGCAA...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGATGCCAGACAGCCCTTaGCATCAGCTCTCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLMPDSP*HQLSRH
Trigger: GTGCCTAGAGAGCTGATGGCAAGGGCTGTCTGGCAT...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCCACCCAAATGAGCCATaGCAGACAGCCCTTGCCATC +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLHPNEP*QTALAI
Trigger: GATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTG...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGCAGGGAACTAAGGTATaGCTGGGGAAACCCCACCCA +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLQGTKV*LGKPHP
Trigger: TGGGTGGGGTTTCCCCAGGCATACCTTAGTTCCCTG...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCGTCACTTTGCAGCCCTaGAACCCCGAGGCACTTCTT +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLVTLQP*NPEALL
Trigger: AAGAAGTGCCTCGGGGTTGCAGGGCTGCAAAGTGAC...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCACCAGGTTCAGGGCCTTaGCTGCATCCACCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAPGSGP*LHPPGE
Trigger: CTCGCCTGGTGGATGCAGCCAAGGCCCTGAACCTGG...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTGCAGCCTCTGTCTCCTaGGTTCAAGCAATTCTCCTA +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSAASVS*VQAILL
Trigger: TAGGAGAATTGCTTGAACCCAGGAGACAGAGGCTGC...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTTTCTTTTCAACTATCTaGGCAAGGTGGCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSFFSTI*ARWPPQ
Trigger: CTGGGGAGGCCACCTTGCCCAGATAGTTGAAAAGAA...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCATCTGAGTCCCATAGGTaGAGCGGAGGCGCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEASESHR*SGGAEA
Trigger: AGCTTCGGCGCCTCCGCTTCACCTATGGGACTCAGA...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTACCCTGAGTGAAACGTaGCTTCAACATGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSTLSET*LQHDRQ
Trigger: CTGCCTATCATGTTGAAGTCACGTTTCACTCAGGGT...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGGCCAGGCGGGGAGCATaGTCTTTCCGAACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVARRGA*SFRTLS
Trigger: GCTGAGGGTTCGGAAAGATCATGCTCCCCGCCTGGC...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTCTGGGCGAGCCCCTGTaGAAAGTTCAGGGGCCATAT +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTLGEPL*KVQGPY
Trigger: ATATGGCCCCTGAACTTTTCACAGGGGCTCGCCCAG...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367161.7
CDS-3UTR TCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCACCAGCACAGTCCTCCTaGAGCGCTTGCTCAGTCAAT +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSPAQSS*SACSVN
Trigger: ATTGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGG...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTGGATGGTCTCCCAGTTaGCCTGATGAGCAACCAGCG +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTGWSPS*PDEQPA
Trigger: CGCTGGTTGCTCATCAGGGCAACTGGGAGACCATCC...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGTTGGTGTCCCCACAATaGTGCCTGACATCATGGCCT +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLLVSPQ*CLTSWP
Trigger: AGGCCATGATGTCAGGCAGCATTGTGGGGACACCAA...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAGCATGGGCTGGACAATaGCCAAGAGAGGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSAWAGQ*PREASS
Trigger: TGAAGAGGCCTCTCTTGGGCATTGTCCAGCCCATGC...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCACCTGAGATACCTGGCTaGAGACAGCAGGAACCAGAC +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSPEIPG*RQQEPD
Trigger: GTCTGGTTCCTGCTGTCTGCAGCCAGGTATCTCAGG...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTTCGCCCAGGCTGGAGTaGAATGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTSPRLE*NGMISA
Trigger: AGCCGAGATCATGCCATTGCACTCCAGCCTGGGCGA...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTATTGCCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLLPRLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGGCAA...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCACCATTTCTCCTGACTaGTCTGCAGGAAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLTISPD*SAGRPL
Trigger: GAGAGGCCTTCCTGCAGAGCAGTCAGGAGAAATGGT...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGACCATTTCTCCTGACTaGTCTGCAGGAAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLTISPD*SAGRPL
Trigger: GAGAGGCCTTCCTGCAGAGCAGTCAGGAGAAATGGT...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCATCGCGGAAGAACTTCTaGGTCTCGCGCAGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSSRKNF*VSRRFC
Trigger: ACAGAACCTGCGCGAGACCCAGAAGTTCTTCCGCGA...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGTGCCCAGCTTGGTGGTaGGAAGCACCTGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLCPAWW*EAPAPP
Trigger: TGGGGGTGCAGGTGCTTCCCACCACCAAGCTGGGCA...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTTCCTGTAAGAGAGCATaGTGCATCGTTACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSSCKRA*CIVTSS
Trigger: ACTGGAGGTAACGATGCACCATGCTCTCTTACAGGA...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGTCTAACCGGCCTGAGTaGCCAGCTTCCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVSNRPE*PASSCR
Trigger: GCGGCAGCTGGAAGCTGGCCACTCAGGCCGGTTAGA...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTAGTTTGATATCACGATaGACAAGTCCCTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSSLISR*TSPWLC
Trigger: GCACAGCCAGGGACTTGTCCATCGTGATATCAAACT...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCACACAGGAAGACGTTCTaGGCGAGCCCCTGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSHRKTF*ASPCEK
Trigger: CTTTTCACAGGGGCTCGCCCAGAACGTCTTCCTGTG...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367161.7
CDS-3UTR CCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCACCCTGGAGCATGGGCTaGACAATGCCCAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAPWSMG*TMPKRG
Trigger: GCCTCTCTTGGGCATTGTCCAGCCCATGCTCCAGGG...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CAA 72 bp ACTCTCGGGCTGAACACAGGGGCCAGACCACAGTTATaGGGGATTAGGCAGATGGAGGGAGACTACTCACTT +
Preference number: 4 (lower is better)
Translates to: TLGLNTGARPQL*GIRQMEGDYSL
Trigger: AAGTGAGTAGTCTCCCTCCATCTGCCTAATCCCCAATAACTGTGGTCTGGCCCCTGTGTTCAGCCCGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCTCCACCAACATGCTCTaGGCTTTAGTATCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLSTNML*ALVSWP
Trigger: TGGCCAGGATACTAAAGCTCAGAGCATGTTGGTGGA...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAGTCGGATGCAGCATTTaGTCTCTCTGGTGCCTACTG +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSVGCSI*SLWCLL
Trigger: CAGTAGGCACCAGAGAGATCAAATGCTGCATCCGAC...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTACTAGCACACAGGGGTaGGGGGCACACACAGAACTA +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTTSTQG*GAHTEL
Trigger: TAGTTCTGTGTGTGCCCCTCACCCCTGTGTGCTAGT...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCCGCTTGCTCAGTCAATaGGCTACTCTTTGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLRLLSQ*ATLCRG
Trigger: TCCTCTGCAAAGAGTAGCTCATTGACTGAGCAAGCG...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTCTGGTCTCGAACTCCTaGCCTCAGGTTTTAAAAAGT +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSLVSNS*PQVLKS
Trigger: ACTTTTTAAAACCTGAGGTCAGGAGTTCGAGACCAG...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTTATCGTACTTCCCTGTaGAAAGTTCAGGGGCCATAT +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSYRTSL*KVQGPY
Trigger: ATATGGCCCCTGAACTTTTCACAGGGAAGTACGATA...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367162.8
CDS-3UTR GCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGCTCAGTTGGCCCGCCTaGAGCCCGGTTTCGGCGACA +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLLSWPA*SPVSAT
Trigger: TGTCGCCGAAACCGGGCTGCAGGCGGGCCAACTGAG...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCACTGCCGCAAGGAGGCTaGAAAAGCCTCGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEALPQGG*KSLVGT
Trigger: AGTTCCCACGAGGCTTTTGCAGCCTCCTTGCGGCAG...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCTCCACCAATCGCTCATaGTTCGGCAGAGACCTCATA +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLSTNRS*FGRDLI
Trigger: TATGAGGTCTCTGCCGAAGCATGAGCGATTGGTGGA...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTATCTTGGCACGGTTCTaGTTATCCAGCAGCACATTT +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSILARF*LSSSTF
Trigger: AAATGTGCTGCTGGATAAGCAGAACCGTGCCAAGAT...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTGTGTCCCCACAATGCTaGCTGACATCATGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTVSPQC*LTSWPL
Trigger: CAGAGGCCATGATGTCAGGCAGCATTGTGGGGACAC...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGCAGGCTTCCATCAACTaGCAGCACTCCTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLQASIN*QHSSSN
Trigger: GTTTGATGAGGAGTGCTGGCAGTTGATGGAAGCCTG...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTCTGCAGTGTCCCGCTTaGTGTCTTAGAAGTATATAC +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSLQCPA*CLRSIY
Trigger: GTATATACTTCTAAGACAGCAAGCGGGACACTGCAG...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGAGCTGGGATTACTGGTaGGTGCCAGCATGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLSWDYW*VPACPA
Trigger: AGCCGGGCATGCTGGCACGCACCAGTAATCCCAGCT...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTTCGCGGAAGAACTTCTaGGTCTCGCGCAGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTSRKNF*VSRRFC
Trigger: ACAGAACCTGCGCGAGACCCAGAAGTTCTTCCGCGA...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAAGACAAGTGTGGTTGTaGGAGCACTTGATGTCGCGG +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSRQVWL*EHLMSR
Trigger: CCGCGACATCAAGTGCTCCCACAACCACACTTGTCT...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGCCTCACTGCCCAGCTTaGTGGTGGGAAGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLPHCPA*WWEAPA
Trigger: TGCAGGTGCTTCCCACCACCAAGCTGGGCAGTGAGG...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTCGCTCTCCATTCTCCTaGTTGAGGAGTCTATTATCT +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSRSPFS*LRSLLS
Trigger: AGATAATAGACTCCTCAACCAGGAGAATGGAGAGCG...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAAGCCGAGTCCGGAATTaGCTGCAAATGCTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSSRVRN*LQMLLA
Trigger: GGCTAAGAGCATTTGCAGCCAATTCCGGACTCGGCT...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTTATACCACACCATACTaGCCCCGGCCCAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTYTTPY*PRPSSC
Trigger: ACAGGAACTGGGCCGGGGCCAGTATGGTGTGGTATA...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTCGATGGACAAGTCCCTaGCTGTGCAGGAAGCGGATT +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTRWTSP*LCRKRI
Trigger: AATCCGCTTCCTGCACAGCCAGGGACTTGTCCATCG...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTTCAGGGGCCATATaGATTGGTGTCCCCACAATG +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLSSGAI*IGVPTM
Trigger: CATTGTGGGGACACCAATCCATATGGCCCCTGAACT...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGCCCTGGAGCATGGGCTaGACAATGCCCAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLPWSMG*TMPKRG
Trigger: GCCTCTCTTGGGCATTGTCCAGCCCATGCTCCAGGG...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTTCTCACCTCACCACTTaGGAACACATACAACCAAAG +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSSHLTT*EHIQPK
Trigger: CTTTGGTTGTATGTGTTCCCAAGTGGTGAGGTGAGA...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTTTTGTGACCCTTCTTTaGCAGCTCAAGCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSFVTLL*QLKQRH
Trigger: GTGTCTTTGCTTGAGCTGCCAAAGAAGGGTCACAAA...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTACCTCCAGGAGAGTTTaGAATACAAGTGTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSTSRRV*NTSVSR
Trigger: CCTTGAGACACTTGTATTCCAAACTCTCCTGGAGGT...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CAA 72 bp TGGGATTACTGGTGCGTGCCAGCATGCCCGGCTAATTaGCAACTCATCTTATACACCTACCTGGGGACCTGT +
Preference number: 4 (lower is better)
Translates to: WDYWCVPACPAN*QLILYTYLGTC
Trigger: ACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCAAATTAGCCGGGCATGCTGGCACGCACCAGTAATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CAA 72 bp CCTCCTGAAGCGCTTGCTCAGTCAATGAGCTACTCTTaGCAGAGGATCAGGGAACTAAGGTATGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PPEALAQSMSYS*QRIRELRYAWG
Trigger: TCCCCAGGCATACCTTAGTTCCCTGATCCTCTGCAAAGAGTAGCTCATTGACTGAGCAAGCGCTTCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGTACTTTCGGATTTCCTaGAGCTCTTGCTCATCCCTC +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLYFRIS*SSCSSL
Trigger: GAGGGATGAGCAAGAGCTTCAGGAAATCCGAAAGTA...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCACTGGCGATAAAGCGGTaGTCTTTCGCTCTCCATTCT +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSLAIKR*SFALHS
Trigger: AGAATGGAGAGCGAAAGATCACCGCTTTATCGCCAG...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGACTGGTGATGTGAACTaGGACATCCTGAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLTGDVN*DILRLL
Trigger: GAGAAGTCTCAGGATGTCTCAGTTCACATCACCAGT...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGTCTTCCATTCCAGAGTaGTGGCAGGTGGGCTCACCC +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLSSIPE*WQVGSP
Trigger: GGGTGAGCCCACCTGCCATCACTCTGGAATGGAAGA...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGATGGACCAGTTTGGTTaGGGAAGGCTTGAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLMDQFG*GRLEVK
Trigger: CTTGACTTCAAGCCTTCCTCAACCAAACTGGTCCAT...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGTACAAACTCTCGGGCTaGACACAGGGGCCAGACCAC +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLYKLSG*TQGPDH
Trigger: GTGGTCTGGCCCCTGTGTTCAGCCCGAGAGTTTGTA...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGTGTAAGAGAGCATGGTaGATCGTTACCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLCKRAW*IVTSSS
Trigger: GGAACTGGAGGTAACGATGCACCATGCTCTCTTACA...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAGAGGCCTTGGCATGGTaGTACCACAACGTCCACTTC +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAEALAW*YHNVHF
Trigger: GAAGTGGACGTTGTGGTAGCACCATGCCAAGGCCTC...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCCTCTGTTTGGCTaGTCAGAATTGGACTTGCAG +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLSPLFG*SELDLQ
Trigger: CTGCAAGTCCAATTCTGAGCAGCCAAACAGAGGACT...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGATGATCTCGGCTCACTaGAACCTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVMISAH*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATCAT...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAATTAGGAGAATCTGCTaGCTAGGCTCTGTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSIRRIC*LGSVPL
Trigger: CAAGGGGACAGAGCCTAGGCAGCAGATTCTCCTAAT...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAAGCACACCTCTCAAATaGCTCAGGGAGCTTGACAGA +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSSTPLK*LRELDR
Trigger: TCTGTCAAGCTCCCTGAGGCATTTGAGAGGTGTGCT...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367162.8
CDS-3UTR CCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGCACTGCCCAGCTTGGTaGTGGGAAGCACCTGCACCC +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLHCPAW*WEAPAP
Trigger: GGGTGCAGGTGCTTCCCACCACCAAGCTGGGCAGTG...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTAGCCGAGTCCGGAATTaGCTGCAAATGCTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTSRVRN*LQMLLA
Trigger: GGCTAAGAGCATTTGCAGCCAATTCCGGACTCGGCT...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTGCTGCAAAAGCCTCGTaGGAACTATTGAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTAAKAS*ELLSRV
Trigger: GACTCGGCTCAATAGTTCCCACGAGGCTTTTGCAGC...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGTTGGCTGCTCAGAATTaGACTTGCAGAGCCGATTCA +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLLAAQN*TCRADS
Trigger: TGAATCGGCTCTGCAAGTCCAATTCTGAGCAGCCAA...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAGGAGTCATCCCTGCCTaGGAAGGTTCCAAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLGVIPA*EGSKFP
Trigger: GGGAAACTTGGAACCTTCCCAGGCAGGGATGACTCC...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTGCTAAAGGGATAGCTTaGCGCTTCAGTGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTAKGIA*RFSELL
Trigger: CAGCAGCTCACTGAAGCGCCAAGCTATCCCTTTAGC...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCTTTGTACATAGGCCATaGCCTCCAATCATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLFVHRP*PPIISH
Trigger: GTGGGAGATGATTGGAGGCCATGGCCTATGTACAAA...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCACCAGACCACAGTTATTaGGGATTAGGCAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSPDHSY*GLGRWR
Trigger: CCTCCATCTGCCTAATCCCCAATAACTGTGGTCTGG...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAGCAGCCTCTGTCTCCTaGGTTCAAGCAATTCTCCTA +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSAASVS*VQAILL
Trigger: TAGGAGAATTGCTTGAACCCAGGAGACAGAGGCTGC...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGCGCCTGCAGTCAGCCTaGCTCCCAACCTCCGTCACT +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLRLQSA*LPTSVT
Trigger: AGTGACGGAGGTTGGGAGCCAGGCTGACTGCAGGCG...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367162.8
CDS-3UTR TCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGCCAATTTGGAGGCGCTaGGGCTCTCAATGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVPIWRR*GSQWLP
Trigger: AGGAAGCCATTGAGAGCCTCAGCGCCTCCAAATTGG...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAGAGGGACAACTGATTTaGGGGCACAAGGGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLEGQLI*GHKGSV
Trigger: GACACTTCCCTTGTGCCCTCAAATCAGTTGTCCCTC...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCGTTGTAGTCAATGACTaGACCATGGAGATCCACCAA +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLVVVND*TMEIHQ
Trigger: TTGGTGGATCTCCATGGTTCAGTCATTGACTACAAC...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAAGAATCCTAAGTCAGTaGTCTTGGCACGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSRILSQ*SWHGSA
Trigger: AGCAGAACCGTGCCAAGATCACTGACTTAGGATTCT...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGCCTCCTTTTCATTTGTaGAGCCAGAACACCACATTC +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLPPFHL*SQNTTF
Trigger: GAATGTGGTGTTCTGGCTTCACAAATGAAAAGGAGG...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCGATCTCGGCTCACCATaGCCTCTGCCTCCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPDLGSP*PLPPGF
Trigger: GAACCCGGGAGGCAGAGGTCATGGTGAGCCGAGATC...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTGGACTTTGGTCATGCTaGGCCCTCTATAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTGLWSC*ALYNPS
Trigger: ACTTGGGTTATAGAGGGCTCAGCATGACCAAAGTCC...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTTTGTTAATCCCACTCTaGCACAATATGGATGGACTA +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSLLIPL*HNMDGL
Trigger: TAGTCCATCCATATTGTGTCAGAGTGGGATTAACAA...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTGTCCTGATGCACCTCTaGGATCACCTCAATTGGACT +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTVLMHL*DHLNWT
Trigger: AGTCCAATTGAGGTGATCTCAGAGGTGCATCAGGAC...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAGACTTCTCCAGGCTCTaGAGACATCGTTCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLDFSRL*RHRSRV
Trigger: AACCCTGGAACGATGTCTGCAGAGCCTGGAGAAGTC...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGCAGGGAACTAAGGTATaGCTGGGGAAACCCCACCCA +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVQGTKV*LGKPHP
Trigger: TGGGTGGGGTTTCCCCAGGCATACCTTAGTTCCCTG...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGGTCACTTTGCAGCCCTaGAACCCCGAGGCACTTCTT +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLVTLQP*NPEALL
Trigger: AAGAAGTGCCTCGGGGTTGCAGGGCTGCAAAGTGAC...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTGAGGAGAGACAAGTGTaGTTGTGGGAGCACTTGATG +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTEERQV*LWEHLM
Trigger: CATCAAGTGCTCCCACAACCACACTTGTCTCTCCTC...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGAGCAGATTCAACAGCTaGCACTTGACGTTACAATCC +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLSRFNS*HLTLQS
Trigger: GGATTGTAACGTCAAGTGCCAGCTGTTGAATCTGCT...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCCACTGCCCAGCTTGGTaGTGGGAAGCACCTGCACCC +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPHCPAW*WEAPAP
Trigger: GGGTGCAGGTGCTTCCCACCACCAAGCTGGGCAGTG...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGGATCCTCCTCAGGGATaGTCTCCCAGTTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLDPPQG*SPSCPD
Trigger: ATCAGGGCAACTGGGAGACCATCCCTGAGGAGGATC...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAAAGATGTCAAGGCAGTaGCAGTGCACCAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAKMSRQ*QCTRFR
Trigger: CCTGAACCTGGTGCACTGCCACTGCCTTGACATCTT...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAGCTGCAAAAGCCTCGTaGGAACTATTGAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAAAKAS*ELLSRV
Trigger: GACTCGGCTCAATAGTTCCCACGAGGCTTTTGCAGC...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCTCTAACCGGCCTGAGTaGCCAGCTTCCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPSNRPE*PASSCR
Trigger: GCGGCAGCTGGAAGCTGGCCACTCAGGCCGGTTAGA...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCTCAATGACTGAACCATaGAGATCCACCAATCGCTCA +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLSMTEP*RSTNRS
Trigger: TGAGCGATTGGTGGATCTCCATGGTTCAGTCATTGA...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCCTACTCTTTTGGCAGTaGACTCTTCCAGGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLLLFWQ*TLPGLL
Trigger: TAACAACCCTGGAAGAGTCCACTGCCAAAAGAGTAG...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGGGTTGTGGGAGCACTTaGTGTCGCGGAAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLGCGST*CRGRTS
Trigger: AGAAGTTCTTCCGCGACATCAAGTGCTCCCACAACC...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCCCAGTTTCGGCACTTTaGAAAAGAATACAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLPVSAL*KRIQER
Trigger: CCTTTCCTGTATTCTTTTTCAAAGTGCCGAAACTGG...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAATCTGGAGGGACAACTaGTTTGAGGGCACAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLIWRDN*FEGTRE
Trigger: TTCCCTTGTGCCCTCAAATCAGTTGTCCCTCCAGAT...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTAGAATCCTAAGTCAGTaGTCTTGGCACGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTRILSQ*SWHGSA
Trigger: AGCAGAACCGTGCCAAGATCACTGACTTAGGATTCT...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAGCTTCAGTGAGCTGCTaGATATGCTCAGTCATTCAA +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSASVSC*ICSVIQ
Trigger: TTGAATGACTGAGCATATTCAGCAGCTCACTGAAGC...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGCTGACCATTGCAACCTaGGATACCTGGCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLLTIAT*DTWLQT
Trigger: TGTCTGCAGCCAGGTATCTCAGGTTGCAATGGTCAG...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCACACAAGAATGCATTTaGGAGCTGACAGGTACTAGT +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLTQECI*ELTGTS
Trigger: ACTAGTACCTGTCAGCTCTCAAATGCATTCTTGTGT...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCACAGCTTATTAGCCACTaGCTGATTAAGTCGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSQLISH*LIKSGD
Trigger: ATCTCCCGACTTAATCAGGCAGTGGCTAATAAGCTG...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGACAAGTCCCTGGCTGTaGAGGAAGCGGATTCCCTCC +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLTSPWL*RKRIPS
Trigger: GGAGGGAATCCGCTTCCTGCACAGCCAGGGACTTGT...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGTTGGTGTCCCCACAATaGTGCCTGACATCATGGCCT +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVLVSPQ*CLTSWP
Trigger: AGGCCATGATGTCAGGCAGCATTGTGGGGACACCAA...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCACCCAACCTCCGTCACTaGCGTTGCAAACAAACCAAA +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAPNLRH*RCKQTK
Trigger: TTTGGTTTGTTTGCAACGGCAGTGACGGAGGTTGGG...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367162.8
CDS-3UTR CCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAGAGGAGAGACAAGTGTaGTTGTGGGAGCACTTGATG +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLEERQV*LWEHLM
Trigger: CATCAAGTGCTCCCACAACCACACTTGTCTCTCCTC...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTTCCTCATTGTTCTCTTaGACCTCCAGATCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTSSLFS*TSRSSS
Trigger: TGAGGAGGATCTGGAGGTCCAAGAGAACAATGAGGA...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCCCGGAGGCCTTGGCATaGTGCTACCACAACGTCCAC +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPPEALA*CYHNVH
Trigger: GTGGACGTTGTGGTAGCACCATGCCAAGGCCTCCGG...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGCTCTCTGGTGCCTACTaGTTCTCCATTCTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVLSGAY*FSILRD
Trigger: GTCCCTGAGAATGGAGAACCAGTAGGCACCAGAGAG...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGGCTAAAGGGATAGCTTaGCGCTTCAGTGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLAKGIA*RFSELL
Trigger: CAGCAGCTCACTGAAGCGCCAAGCTATCCCTTTAGC...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAACATTGTTCCAGAGATaGTCTTTGCTAGCACACCTC +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSTLFQR*SLLAHL
Trigger: GAGGTGTGCTAGCAAAGACCATCTCTGGAACAATGT...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367162.8
3UTR CAA 72 bp AGGAGAATCTGCTGCCTAGGCTCTGTCCCCTTGAAGTaGATGGAGTCAAAAGTGACTCTCTTTGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: RRICCLGSVPLK*MESKVTLFGLG
Trigger: TCCCAGACCAAAGAGAGTCACTTTTGACTCCATCAACTTCAAGGGGACAGAGCCTAGGCAGCAGATTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGTCCACCAACATGCTCTaGGCTTTAGTATCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLSTNML*ALVSWP
Trigger: TGGCCAGGATACTAAAGCTCAGAGCATGTTGGTGGA...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTTTATTAGCCACTGCCTaGTTAAGTCGGGAGATGATG +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTLLATA*LSREMM
Trigger: CATCATCTCCCGACTTAATCAGGCAGTGGCTAATAA...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAACCCTGAGTGAAACGTaGCTTCAACATGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEATLSET*LQHDRQ
Trigger: CTGCCTATCATGTTGAAGTCACGTTTCACTCAGGGT...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTAACACACTGGCACTATaGGGAACAGATAGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTNTLAL*GTDSSV
Trigger: AACAGAGCTATCTGTTCCTCATAGTGCCAGTGTGTT...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAATGGACCAGTTTGGTTaGGGAAGGCTTGAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAMDQFG*GRLEVK
Trigger: CTTGACTTCAAGCCTTCCTCAACCAAACTGGTCCAT...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGTTACCCCTCCTTTCTTaGCACCTGACTCCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVLPLLS*HLTPLK
Trigger: CTTCAAGGGAGTCAGGTGTCAAGAAAGGAGGGGTAA...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGGCTGCCAGACTTCTTTaGAAACCTAGTGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLAARLL*KPSVLP
Trigger: TGGGAGGACACTAGGTTTTCAAAGAAGTCTGGCAGC...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTAATGCATTTGAGAGCTaGCAGGTACTAGTCGAGAGT +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTNAFES*QVLVES
Trigger: ACTCTCGACTAGTACCTGTCAGCTCTCAAATGCATT...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAAGGAAGAACACTTTGTaGCCCTTCTTTGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLRKNTL*PFFGSS
Trigger: TGAGCTGCCAAAGAAGGGTCACAAAGTGTTCTTCCT...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAAGGAAGAACACTTTGTaGCCCTTCTTTGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEARKNTL*PFFGSS
Trigger: TGAGCTGCCAAAGAAGGGTCACAAAGTGTTCTTCCT...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGGCCAGATCATTCCAGTaGTTCTCATCTGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVARSFQ*FSSGGT
Trigger: TGTCCCTCCAGATGAGAAGCACTGGAATGATCTGGC...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGCAGGCTTCCATCAACTaGCAGCACTCCTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVQASIN*QHSSSN
Trigger: GTTTGATGAGGAGTGCTGGCAGTTGATGGAAGCCTG...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAAGTCCTCTGTTTGGCTaGTCAGAATTGGACTTGCAG +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEASPLFG*SELDLQ
Trigger: CTGCAAGTCCAATTCTGAGCAGCCAAACAGAGGACT...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGTTCAAGCGATTCTCCTaGCTCAGCCTCCTGAGTATC +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLFKRFS*LSLLSI
Trigger: GATACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAA...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCTCGCCCAGGCTGGAGTaGAATGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPSPRLE*NGMISA
Trigger: AGCCGAGATCATGCCATTGCACTCCAGCCTGGGCGA...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGATGCCAGACAGCCCTTaGCATCAGCTCTCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLMPDSP*HQLSRH
Trigger: GTGCCTAGAGAGCTGATGGCAAGGGCTGTCTGGCAT...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGCACCCAAATGAGCCATaGCAGACAGCCCTTGCCATC +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLHPNEP*QTALAI
Trigger: GATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTG...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCGTGCAGTTGTCACTTTaGAGCCCTGCAACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPVQLSL*SPATPR
Trigger: CCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCAC...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGCAAAAGACAACAGGCTaGCCAGACCAATTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLQKTTG*PDQFSF
Trigger: AAAAGAAAATTGGTCTGGGCAGCCTGTTGTCTTTTG...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTCAATTAAGACGGTCCTaGTGTAACAATATTATGGAA +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSQLRRS*CNNIME
Trigger: TTCCATAATATTGTTACAGCAGGACCGTCTTAATTG...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACCCTGACGCCCCCGCCTaGAGTCAGCCTGGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADPDAPA*SQPGSQ
Trigger: TTGGGAGCCAGGCTGACTGCAGGCGGGGGCGTCAGG...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367162.8
CDS-3UTR CCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTTTGACGTTACAATCCTaGCCGAGGATCAGTATGCAA +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTLTLQS*PRISMQ
Trigger: TTGCATACTGATCCTCGGCCAGGATTGTAACGTCAA...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTAGCAGATTCAACAGCTaGCACTTGACGTTACAATCC +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTSRFNS*HLTLQS
Trigger: GGATTGTAACGTCAAGTGCCAGCTGTTGAATCTGCT...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCATCCTGTAAGAGAGCATaGTGCATCGTTACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEASCKRA*CIVTSS
Trigger: ACTGGAGGTAACGATGCACCATGCTCTCTTACAGGA...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAAGTTTGATATCACGATaGACAAGTCCCTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLSLISR*TSPWLC
Trigger: GCACAGCCAGGGACTTGTCCATCGTGATATCAAACT...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAAAGCAACTACTCTTTTaGCAGTGGACTCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLKQLLF*QWTLPG
Trigger: CCCTGGAAGAGTCCACTGCCAAAAGAGTAGTTGCTT...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAAAGCAACTACTCTTTTaGCAGTGGACTCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAKQLLF*QWTLPG
Trigger: CCCTGGAAGAGTCCACTGCCAAAAGAGTAGTTGCTT...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTATTATACAGCACATCTaGTATTTGTGTATCCCAACA +
Preference number: 4 (lower is better)
Translates to: LGKPHPNEPCQTALAISSIIQHI*YLCIPT
Trigger: TGTTGGGATACACAAATACCAGATGTGCTGTATAAT...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CAA 72 bp AGGAACAGTAGTGCTACTGGAAACCTCCAGGAGAGTTaGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: RNSSATGNLQES*EYKCLKATPSL
Trigger: TAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAGGTTTCCAGTAGCACTACTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGGGTTGTGGGAGCACTTaGTGTCGCGGAAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLGCGST*CRGRTS
Trigger: AGAAGTTCTTCCGCGACATCAAGTGCTCCCACAACC...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAGTCTGTAACACCTGGTaGGAAAATGTGCTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAVCNTW*ENVLKC
Trigger: ACACTTGAGCACATTTTCTCACCAGGTGTTACAGAC...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGGAGGGACAACTGATTTaGGGGCACAAGGGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLEGQLI*GHKGSV
Trigger: GACACTTCCCTTGTGCCCTCAAATCAGTTGTCCCTC...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTCATAGTTGTAGTCAATaGCTGAACCATGGAGATCCA +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTHSCSQ*LNHGDP
Trigger: TGGATCTCCATGGTTCAGTCATTGACTACAACTATG...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAGCACATTTTTCAGTTTaGTATCACGATGGACAAGTC +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSAHFSV*YHDGQV
Trigger: GACTTGTCCATCGTGATATCAAACTGAAAAATGTGC...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGAGCTTGGCGCTTCAGTaGGCTGCTGAATATGCTCAG +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLSLALQ*AAEYAQ
Trigger: CTGAGCATATTCAGCAGCTCACTGAAGCGCCAAGCT...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGTGCTCAAACATATCATaGTCAGAGCCCAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLCSNIS*SEPRIA
Trigger: GGCTATCCTGGGCTCTGATCATGATATGTTTGAGCA...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGTGCTCAAACATATCATaGTCAGAGCCCAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVCSNIS*SEPRIA
Trigger: GGCTATCCTGGGCTCTGATCATGATATGTTTGAGCA...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCATTTCTGAAACAAAATaGGAGACCAGACTTCAAGCT +
Preference number: 4 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLISETK*ETRLQA
Trigger: AGCTTGAAGTCTGGTCTCTCATTTTGTTTCAGAAAT...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGGAGGCACTTCTTCCATaGGGAAGAACACTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLEALLP*GRTLCD
Trigger: GTCACAAAGTGTTCTTCCTCATGGAAGAAGTGCCTC...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAACTAGGGAGGCTTCCTaGTTATCCAAATGGAATACC +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEATREAS*LSKWNT
Trigger: GGTATTCCATTTGGATAATCAGGAAGCCTCCCTAGT...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACGCCCTCCATCGCCTCTaGCCGCTCTGTCTTTGCGGC +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADALHRL*PLCLCG
Trigger: GCCGCAAAGACAGAGCGGGCAGAGGCGATGGAGGGC...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCATTCATCTTTGTGGAGTaGATAGGTTATCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSFIFVE*IGYHRQ
Trigger: TTGCCTGTGATAACCTATGCACTCCACAAAGATGAA...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAATCTTGGCACGGTTCTaGTTATCCAGCAGCACATTT +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAILARF*LSSSTF
Trigger: AAATGTGCTGCTGGATAAGCAGAACCGTGCCAAGAT...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCGTGTCCCCACAATGCTaGCTGACATCATGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPVSPQC*LTSWPL
Trigger: CAGAGGCCATGATGTCAGGCAGCATTGTGGGGACAC...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAATACACACGTATACCTaGACTCAGCCTGCTGAGTAT +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLIHTYT*TQPAEY
Trigger: ATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTAT...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCGATCCTCCTCAGGGATaGTCTCCCAGTTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPDPPQG*SPSCPD
Trigger: ATCAGGGCAACTGGGAGACCATCCCTGAGGAGGATC...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTCCAGAACATCCACTGTaGGCCGGAGGCCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLPEHPL*AGGLGM
Trigger: CATGCCAAGGCCTCCGGCCCACAGTGGATGTTCTGG...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGCCAGGTTCAGGGCCTTaGCTGCATCCACCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMPGSGP*LHPPGE
Trigger: CTCGCCTGGTGGATGCAGCCAAGGCCCTGAACCTGG...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAACCCATGTGATGCGCTaGATGATCTGTTTGATTTGC +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEATHVMR*MICLIC
Trigger: GCAAATCAAACAGATCATCCAGCGCATCACATGGGT...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAACCCATGTGATGCGCTaGATGATCTGTTTGATTTGC +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLTHVMR*MICLIC
Trigger: GCAAATCAAACAGATCATCCAGCGCATCACATGGGT...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCAGGGGCCATATGGATTaGTGTCCCCACAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPRGHMD*CPHNAA
Trigger: GGCAGCATTGTGGGGACACCAATCCATATGGCCCCT...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGTTGGCTGCTCAGAATTaGACTTGCAGAGCCGATTCA +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLLAAQN*TCRADS
Trigger: TGAATCGGCTCTGCAAGTCCAATTCTGAGCAGCCAA...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGCCAGACGTTTGGGAGTaGTCTGCAGGTCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMPDVWE*SAGPAA
Trigger: TGCAGCGGGACCTGCAGATCACTCCCAAACGTCTGG...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACGCCAGGCGGGGAGCATaGTCTTTCCGAACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADARRGA*SFRTLS
Trigger: GCTGAGGGTTCGGAAAGATCATGCTCCCCGCCTGGC...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAAGTTTAGGTTTACGATaGAGCAAGACATCCTGTAAA +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSSLGLR*SKTSCK
Trigger: TTTACAGGATGTCTTGCTTCATCGTAAACCTAAACT...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGGTTGTAGTCAATGACTaGACCATGGAGATCCACCAA +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVVVVND*TMEIHQ
Trigger: TTGGTGGATCTCCATGGTTCAGTCATTGACTACAAC...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAACACAAGAATGCATTTaGGAGCTGACAGGTACTAGT +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLTQECI*ELTGTS
Trigger: ACTAGTACCTGTCAGCTCTCAAATGCATTCTTGTGT...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAAGAGAGGATAAAGACTaGAGTGTGTGCCAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAREDKD*SVCQSH
Trigger: ATGACTTTGGCACACACTTCAGTCTTTATCCTCTCT...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAAGAGAGGATAAAGACTaGAGTGTGTGCCAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLREDKD*SVCQSH
Trigger: ATGACTTTGGCACACACTTCAGTCTTTATCCTCTCT...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGAGTTCCAGTGACTGCTaGTCAGATAGCCCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLSSSDC*SDSPGQ
Trigger: TTGACCTGGGCTATCTGAGCAGCAGTCACTGGAACT...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGATCTGCAGGTCCCGCTaGATGTCAAATGCCTGGTTA +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLICRSR*MSNAWL
Trigger: TAACCAGGCATTTGACATGCAGCGGGACCTGCAGAT...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTATCCTTCATTTCCTCCTaGTTTCGGTTGGCAATATTC +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLSFISS*FRLAIF
Trigger: GAATATTGCCAACCGAAAGCAGGAGGAAATGAAGGA...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGCAGCTTATTAGCCACTaGCTGATTAAGTCGGGAGAT +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVQLISH*LIKSGD
Trigger: ATCTCCCGACTTAATCAGGCAGTGGCTAATAAGCTG...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGCTGCAGTGTCCCGCTTaGTGTCTTAGAAGTATATAC +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLLQCPA*CLRSIY
Trigger: GTATATACTTCTAAGACAGCAAGCGGGACACTGCAG...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTATGATCTCGGCTCACTaGAACCTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLMISAH*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATCAT...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGATACACACGTATACCTaGACTCAGCCTGCTGAGTAT +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLIHTYT*TQPAEY
Trigger: ATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTAT...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTCTGCCCAGGCTGGAGTaGAGTGGTGTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLLPRLE*SGVILA
Trigger: AGCCAAGATCACACCACTGCACTCCAGCCTGGGCAG...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTCAAAAGACAACAGGCTaGCCAGACCAATTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LQESLEYKCLKATPSLPTQKTTG*PDQFSF
Trigger: AAAAGAAAATTGGTCTGGGCAGCCTGTTGTCTTTTG...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGCAGTCCACAATCTGCTaGAGGTACTTCTCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLQSTIC*RYFSSL
Trigger: TAAGGAAGAGAAGTACCTCCAGCAGATTGTGGACTG...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGCCGGAGGCCTTGGCATaGTGCTACCACAACGTCCAC +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMPEALA*CYHNVH
Trigger: GTGGACGTTGTGGTAGCACCATGCCAAGGCCTCCGG...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTCAGAGTGATGGCAGGTaGGCTCACCCATGTGATGCG +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLQSDGR*AHPCDA
Trigger: CGCATCACATGGGTGAGCCCACCTGCCATCACTCTG...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGAGTTCAGGGGCCATATaGATTGGTGTCCCCACAATG +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLSSGAI*IGVPTM
Trigger: CATTGTGGGGACACCAATCCATATGGCCCCTGAACT...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCATACTTCGCATTGGGTTaGTTTTGCTTAGACACTCAC +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAYFALG*FCLDTH
Trigger: GTGAGTGTCTAAGCAAAACCAACCCAATGCGAAGTA...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGTGGGGATTAGGCAGATaGAGGGAGACTACTCACTTC +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLWGLGR*RETTHF
Trigger: GAAGTGAGTAGTCTCCCTCCATCTGCCTAATCCCCA...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGCCAAATATCCATATGTaGACTTTGGCTGGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVPNIHM*TLAGLE
Trigger: CTCTAGGCCAGCCAAAGTCCACATATGGATATTTGG...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAACATACAACCAAAGCTaGGAGGTAAAATCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSTYNQS*EVKSLG
Trigger: TCCTAAAGATTTTACCTCCCAGCTTTGGTTGTATGT...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGCTACTCTTTTGGCAGTaGACTCTTCCAGGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLLLFWQ*TLPGLL
Trigger: TAACAACCCTGGAAGAGTCCACTGCCAAAAGAGTAG...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGCCAGTTTCGGCACTTTaGAAAAGAATACAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLPVSAL*KRIQER
Trigger: CCTTTCCTGTATTCTTTTTCAAAGTGCCGAAACTGG...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGCTCCATTCTCCTGGTTaGGGAGTCTATTATCTCCGA +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLLHSPG*GVYYLR
Trigger: TCGGAGATAATAGACTCCTCAACCAGGAGAATGGAG...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACCCAGACGTTTGGGAGTaGTCTGCAGGTCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADPDVWE*SAGPAA
Trigger: TGCAGCGGGACCTGCAGATCACTCCCAAACGTCTGG...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGCCTCGTGGGAACTATTaGGCCGAGTCCGGAATTGGC +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMPRGNY*AESGIG
Trigger: GCCAATTCCGGACTCGGCTCAATAGTTCCCACGAGG...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGTGCAGAGCCGATTCATaGTGCCCTGGAGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMCRADS*CPGAWA
Trigger: AGCCCATGCTCCAGGGCATCATGAATCGGCTCTGCA...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTACCTCCCATATGTGAATaGGAGTATGAGCTAATACTT +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLPPICE*EYELIL
Trigger: AAGTATTAGCTCATACTCTCATTCACATATGGGAGG...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCCGCTTGCTCAGTCAATaGGCTACTCTTTGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPRLLSQ*ATLCRG
Trigger: TCCTCTGCAAAGAGTAGCTCATTGACTGAGCAAGCG...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGTCAAGGCAGTGGCAGTaGACCAGGTTCAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMSRQWQ*TRFRAL
Trigger: CAAGGCCCTGAACCTGGTGCACTGCCACTGCCTTGA...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGCTGCCGCAAGGAGGCTaGAAAAGCCTCGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMLPQGG*KSLVGT
Trigger: AGTTCCCACGAGGCTTTTGCAGCCTCCTTGCGGCAG...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGTCCTCATTGTTCTCTTaGACCTCCAGATCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLSSLFS*TSRSSS
Trigger: TGAGGAGGATCTGGAGGTCCAAGAGAACAATGAGGA...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGGAGATGATGAGTTCCTaGATCTGTCGGATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLEMMSS*ICRMQH
Trigger: ATGCTGCATCCGACAGATCCAGGAACTCATCATCTC...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTATCTTATACACCTACCTaGGGACCTGTTTTACAAACT +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLSYTPT*GPVLQT
Trigger: AGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGA...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCATCTTATACACCTACCTaGGGACCTGTTTTACAAACT +
Preference number: 4 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEASYTPT*GPVLQT
Trigger: AGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGA...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGTATGTGGACTTTGGCTaGCCTAGAGACTTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVYVDFG*PRDFQE
Trigger: TTCTTGAAAGTCTCTAGGCCAGCCAAAGTCCACATA...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCTTCTTTTCAACTATCTaGGCAAGGTGGCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPFFSTI*ARWPPQ
Trigger: CTGGGGAGGCCACCTTGCCCAGATAGTTGAAAAGAA...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CAA 72 bp CACCTCTCAGTTCTCACCCAAATACTTCGCATTGGGTaGGTTTTGCTTAGACACTCACTCCTAAGTACCATG +
Preference number: 4 (lower is better)
Translates to: HLSVLTQILRIG*VLLRHSLLSTM
Trigger: CATGGTACTTAGGAGTGAGTGTCTAAGCAAAACCAACCCAATGCGAAGTATTTGGGTGAGAACTGAGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCCCTCAGGTAATCCACTaGGCTGATCAGCTTATTAGC +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPPQVIH*ADQLIS
Trigger: GCTAATAAGCTGATCAGCTCAGTGGATTACCTGAGG...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCACTGGTGATGTGAACTaGGACATCCTGAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPTGDVN*DILRLL
Trigger: GAGAAGTCTCAGGATGTCTCAGTTCACATCACCAGT...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGGCACATTTTTCAGTTTaGTATCACGATGGACAAGTC +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLAHFSV*YHDGQV
Trigger: GACTTGTCCATCGTGATATCAAACTGAAAAATGTGC...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGTGGCCAGGCTGCTCTTaGACTCTGGACCTTGTGATC +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMWPGCS*TLDLVI
Trigger: GATCACAAGGTCCAGAGTTCAAGAGCAGCCTGGCCA...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGCCTCCCATATGTGAATaGGAGTATGAGCTAATACTT +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVPPICE*EYELIL
Trigger: AAGTATTAGCTCATACTCTCATTCACATATGGGAGG...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCGAGGCACTTCTTCCATaGGGAAGAACACTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPEALLP*GRTLCD
Trigger: GTCACAAAGTGTTCTTCCTCATGGAAGAAGTGCCTC...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGTTCATCTTTGTGGAGTaGATAGGTTATCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLFIFVE*IGYHRQ
Trigger: TTGCCTGTGATAACCTATGCACTCCACAAAGATGAA...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACACAAGTCCCTGGCTGTaGAGGAAGCGGATTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADTSPWL*RKRIPS
Trigger: GGAGGGAATCCGCTTCCTGCACAGCCAGGGACTTGT...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCCTTCTCTTCCTTAGGTaGGAAGGAAATGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPLLFLR*EGNAAQ
Trigger: CTGAGCTGCATTTCCTTCCCACCTAAGGAAGAGAAG...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTCTCTCAATGGCTTCCTaGGCCACCTTCCTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLLSMAS*ATFLFH
Trigger: ATGGAAGAGGAAGGTGGCCCAGGAAGCCATTGAGAG...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTGGAGCACAGCAATGCTaGAGCCACCACCATAGTTGT +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLGAQQC*SHHHSC
Trigger: ACAACTATGGTGGTGGCTCCAGCATTGCTGTGCTCC...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGAAAAGTGACTCTCTTTaGTCTGGGAACAACCAGCAC +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLKSDSL*SGNNQH
Trigger: GTGCTGGTTGTTCCCAGACCAAAGAGAGTCACTTTT...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGACCTCCAGGAGAGTTTaGAATACAAGTGTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLTSRRV*NTSVSR
Trigger: CCTTGAGACACTTGTATTCCAAACTCTCCTGGAGGT...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGGCTGTAACAATATTATaGAAAGAGCCAGGTAGCACA +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVAVTIL*KEPGST
Trigger: TGTGCTACCTGGCTCTTTCCATAATATTGTTACAGC...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGTCAACAGCTGGCACTTaGCGTTACAATCCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMSTAGT*RYNPGR
Trigger: TCGGCCAGGATTGTAACGTCAAGTGCCAGCTGTTGA...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGGTCGGATGCAGCATTTaGTCTCTCTGGTGCCTACTG +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMVGCSI*SLWCLL
Trigger: CAGTAGGCACCAGAGAGATCAAATGCTGCATCCGAC...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCTTATTAGCCACTGCCTaGTTAAGTCGGGAGATGATG +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPLLATA*LSREMM
Trigger: CATCATCTCCCGACTTAATCAGGCAGTGGCTAATAA...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGAGTTTAGGTTTACGATaGAGCAAGACATCCTGTAAA +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVSLGLR*SKTSCK
Trigger: TTTACAGGATGTCTTGCTTCATCGTAAACCTAAACT...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCGCTTCAGTGAGCTGCTaGATATGCTCAGTCATTCAA +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPASVSC*ICSVIQ
Trigger: TTGAATGACTGAGCATATTCAGCAGCTCACTGAAGC...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACCCTGCCTCAGCCTCCTaGGTATCTTGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADPASAS*VSWITG
Trigger: GCCTGTAATCCAAGATACTCAGGAGGCTGAGGCAGG...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTTTACCCCTCCTTTCTTaGCACCTGACTCCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLLPLLS*HLTPLK
Trigger: CTTCAAGGGAGTCAGGTGTCAAGAAAGGAGGGGTAA...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTGGACTTTGGTCATGCTaGGCCCTCTATAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLGLWSC*ALYNPS
Trigger: ACTTGGGTTATAGAGGGCTCAGCATGACCAAAGTCC...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGATGATCTGTTTGATTTaGTCCCATAGCATCCTTGTA +
Preference number: 4 (lower is better)
Translates to: HAEPSITQVLPDFFENLVMICLI*SHSILV
Trigger: TACAAGGATGCTATGGGAGCAAATCAAACAGATCAT...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTGCCAGATCATTCCAGTaGTTCTCATCTGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLARSFQ*FSSGGT
Trigger: TGTCCCTCCAGATGAGAAGCACTGGAATGATCTGGC...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGAAGATGTCAAGGCAGTaGCAGTGCACCAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMKMSRQ*QCTRFR
Trigger: CCTGAACCTGGTGCACTGCCACTGCCTTGACATCTT...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACTATACCACACCATACTaGCCCCGGCCCAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADYTTPY*PRPSSC
Trigger: ACAGGAACTGGGCCGGGGCCAGTATGGTGTGGTATA...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGTGCTGCCTGACATCATaGCCTCTGGCTTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMCCLTS*PLACRI
Trigger: GATTCTGCAAGCCAGAGGCCATGATGTCAGGCAGCA...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACAGGGGCCATATGGATTaGTGTCCCCACAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADRGHMD*CPHNAA
Trigger: GGCAGCATTGTGGGGACACCAATCCATATGGCCCCT...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTTGGGGATTAGGCAGATaGAGGGAGACTACTCACTTC +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLWGLGR*RETTHF
Trigger: GAAGTGAGTAGTCTCCCTCCATCTGCCTAATCCCCA...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCTCTCACCTCACCACTTaGGAACACATACAACCAAAG +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPSHLTT*EHIQPK
Trigger: CTTTGGTTGTATGTGTTCCCAAGTGGTGAGGTGAGA...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTGAACTAAGGTATGCCTaGGGAAACCCCACCCAAATG +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLELRYA*GNPTQM
Trigger: CATTTGGGTGGGGTTTCCCCAGGCATACCTTAGTTC...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAATTATACAGCACATCTaGTATTTGTGTATCCCAACA +
Preference number: 4 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLIIQHI*YLCIPT
Trigger: TGTTGGGATACACAAATACCAGATGTGCTGTATAAT...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTCTCCATTCTCCTGGTTaGGGAGTCTATTATCTCCGA +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLLHSPG*GVYYLR
Trigger: TCGGAGATAATAGACTCCTCAACCAGGAGAATGGAG...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTCCTCAGGTAATCCACTaGGCTGATCAGCTTATTAGC +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLPQVIH*ADQLIS
Trigger: GCTAATAAGCTGATCAGCTCAGTGGATTACCTGAGG...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGCTCAAGCACACTTCATaGGGAACCCTCCAAAAGACC +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMLKHTS*GTLQKT
Trigger: GGTCTTTTGGAGGGTTCCTCATGAAGTGTGCTTGAG...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGAGAGCCCAAAGACACTaGGTCAGTTACTTTATCATT +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLRAQRH*VSYFII
Trigger: AATGATAAAGTAACTGACTCAGTGTCTTTGGGCTCT...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGTTGTTAATCCCACTCTaGCACAATATGGATGGACTA +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLLLIPL*HNMDGL
Trigger: TAGTCCATCCATATTGTGTCAGAGTGGGATTAACAA...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACGACTTCTCCAGGCTCTaGAGACATCGTTCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADDFSRL*RHRSRV
Trigger: AACCCTGGAACGATGTCTGCAGAGCCTGGAGAAGTC...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGTTCAAGCGATTCTCCTaGCTCAGCCTCCTGAGTATC +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMFKRFS*LSLLSI
Trigger: GATACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAA...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACCTCTCAATGGCTTCCTaGGCCACCTTCCTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADLSMAS*ATFLFH
Trigger: ATGGAAGAGGAAGGTGGCCCAGGAAGCCATTGAGAG...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACGGAGCACAGCAATGCTaGAGCCACCACCATAGTTGT +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADGAQQC*SHHHSC
Trigger: ACAACTATGGTGGTGGCTCCAGCATTGCTGTGCTCC...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACTGCTGCCTGACATCATaGCCTCTGGCTTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADCCLTS*PLACRI
Trigger: GATTCTGCAAGCCAGAGGCCATGATGTCAGGCAGCA...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGGAACTAAGGTATGCCTaGGGAAACCCCACCCAAATG +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMELRYA*GNPTQM
Trigger: CATTTGGGTGGGGTTTCCCCAGGCATACCTTAGTTC...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGGCTGTAACAATATTATaGAAAGAGCCAGGTAGCACA +
Preference number: 4 (lower is better)
Translates to: INPESHLFKMHTIKTVLLAVTIL*KEPGST
Trigger: TGTGCTACCTGGCTCTTTCCATAATATTGTTACAGC...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
3UTR CAA 72 bp TCAGTTCTCACCCAAATACTTCGCATTGGGTTGGTTTaGCTTAGACACTCACTCCTAAGTACCATGTTATCT +
Preference number: 4 (lower is better)
Translates to: SVLTQILRIGLV*LRHSLLSTMLS
Trigger: AGATAACATGGTACTTAGGAGTGAGTGTCTAAGCAAAACCAACCCAATGCGAAGTATTTGGGTGAGAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGTACTTTCGGATTTCCTaGAGCTCTTGCTCATCCCTC +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMYFRIS*SSCSSL
Trigger: GAGGGATGAGCAAGAGCTTCAGGAAATCCGAAAGTA...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACCTGGCGATAAAGCGGTaGTCTTTCGCTCTCCATTCT +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADLAIKR*SFALHS
Trigger: AGAATGGAGAGCGAAAGATCACCGCTTTATCGCCAG...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACATCTGGAGGGACAACTaGTTTGAGGGCACAAGGGAA +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADIWRDN*FEGTRE
Trigger: TTCCCTTGTGCCCTCAAATCAGTTGTCCCTCCAGAT...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCAGAGCCCAAAGACACTaGGTCAGTTACTTTATCATT +
Preference number: 4 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPRAQRH*VSYFII
Trigger: AATGATAAAGTAACTGACTCAGTGTCTTTGGGCTCT...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTACTAGGGAGGCTTCCTaGTTATCCAAATGGAATACC +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLTREAS*LSKWNT
Trigger: GGTATTCCATTTGGATAATCAGGAAGCCTCCCTAGT...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTCTGGTCTCGAACTCCTaGCCTCAGGTTTTAAAAAGT +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLLVSNS*PQVLKS
Trigger: ACTTTTTAAAACCTGAGGTCAGGAGTTCGAGACCAG...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACGTCCTGATGCACCTCTaGGATCACCTCAATTGGACT +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADVLMHL*DHLNWT
Trigger: AGTCCAATTGAGGTGATCTCAGAGGTGCATCAGGAC...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGGAGCTTGACAGAGCCTaGGCAGATATACCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMELDRA*ADIPEK
Trigger: CTTTTCTGGTATATCTGCTCAGGCTCTGTCAAGCTC...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367162.8
CDS-3UTR GCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGTGTAAGAGAGCATGGTaGATCGTTACCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMCKRAW*IVTSSS
Trigger: GGAACTGGAGGTAACGATGCACCATGCTCTCTTACA...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACATCTGCAGGTCCCGCTaGATGTCAAATGCCTGGTTA +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADICRSR*MSNAWL
Trigger: TAACCAGGCATTTGACATGCAGCGGGACCTGCAGAT...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACTCCACCAATCGCTCATaGTTCGGCAGAGACCTCATA +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADSTNRS*FGRDLI
Trigger: TATGAGGTCTCTGCCGAAGCATGAGCGATTGGTGGA...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGCTTCTCTTCCTTAGGTaGGAAGGAAATGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMLLFLR*EGNAAQ
Trigger: CTGAGCTGCATTTCCTTCCCACCTAAGGAAGAGAAG...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTCGCTCTCCATTCTCCTaGTTGAGGAGTCTATTATCT +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLRSPFS*LRSLLS
Trigger: AGATAATAGACTCCTCAACCAGGAGAATGGAGAGCG...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGGAGATGATGAGTTCCTaGATCTGTCGGATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMEMMSS*ICRMQH
Trigger: ATGCTGCATCCGACAGATCCAGGAACTCATCATCTC...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTCAGCAAACTAAGCCGTaGGGTAAACTAAAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLQQTKP*GKLKRD
Trigger: GTCCCTTTTTAGTTTACCCCACGGCTTAGTTTGCTG...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTAAAAGTGACTCTCTTTaGTCTGGGAACAACCAGCAC +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLKSDSL*SGNNQH
Trigger: GTGCTGGTTGTTCCCAGACCAAAGAGAGTCACTTTT...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTTTTGTGACCCTTCTTTaGCAGCTCAAGCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLFVTLL*QLKQRH
Trigger: GTGTCTTTGCTTGAGCTGCCAAAGAAGGGTCACAAA...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGGTCTGTAACACCTGGTaGGAAAATGTGCTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMVCNTW*ENVLKC
Trigger: ACACTTGAGCACATTTTCTCACCAGGTGTTACAGAC...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGCCTCCTTTTCATTTGTaGAGCCAGAACACCACATTC +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMPPFHL*SQNTTF
Trigger: GAATGTGGTGTTCTGGCTTCACAAATGAAAAGGAGG...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGAACACACTGGCACTATaGGGAACAGATAGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMNTLAL*GTDSSV
Trigger: AACAGAGCTATCTGTTCCTCATAGTGCCAGTGTGTT...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGCAGTCCACAATCTGCTaGAGGTACTTCTCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMQSTIC*RYFSSL
Trigger: TAAGGAAGAGAAGTACCTCCAGCAGATTGTGGACTG...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGTTGACGTTACAATCCTaGCCGAGGATCAGTATGCAA +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMLTLQS*PRISMQ
Trigger: TTGCATACTGATCCTCGGCCAGGATTGTAACGTCAA...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGCCAAATATCCATATGTaGACTTTGGCTGGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMPNIHM*TLAGLE
Trigger: CTCTAGGCCAGCCAAAGTCCACATATGGATATTTGG...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACTCAATGACTGAACCATaGAGATCCACCAATCGCTCA +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADSMTEP*RSTNRS
Trigger: TGAGCGATTGGTGGATCTCCATGGTTCAGTCATTGA...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGTATGTGGACTTTGGCTaGCCTAGAGACTTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMYVDFG*PRDFQE
Trigger: TTCTTGAAAGTCTCTAGGCCAGCCAAAGTCCACATA...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR TCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACCATAGTTGTAGTCAATaGCTGAACCATGGAGATCCA +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADHSCSQ*LNHGDP
Trigger: TGGATCTCCATGGTTCAGTCATTGACTACAACTATG...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACTCCTTCATTTCCTCCTaGTTTCGGTTGGCAATATTC +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADSFISS*FRLAIF
Trigger: GAATATTGCCAACCGAAAGCAGGAGGAAATGAAGGA...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTATGATCTGTTTGATTTaGTCCCATAGCATCCTTGTA +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLMICLI*SHSILV
Trigger: TACAAGGATGCTATGGGAGCAAATCAAACAGATCAT...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGAAGTACCATGTTATCTaGAGCTTTCCCACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PFNITLMKINPESHLFKMKYHVI*SFPTLR
Trigger: TCTCAAAGTGGGAAAGCTCCAGATAACATGGTACTT...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR GCA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTCAATTAAGACGGTCCTaGTGTAACAATATTATGGAA +
Preference number: 4 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLQLRRS*CNNIME
Trigger: TTCCATAATATTGTTACAGCAGGACCGTCTTAATTG...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACAAGTACCATGTTATCTaGAGCTTTCCCACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADKYHVI*SFPTLR
Trigger: TCTCAAAGTGGGAAAGCTCCAGATAACATGGTACTT...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CCA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACACATACAACCAAAGCTaGGAGGTAAAATCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: SITYNKNGCQRTKPKLADTYNQS*EVKSLG
Trigger: TCCTAAAGATTTTACCTCCCAGCTTTGGTTGTATGT...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTCTGCCCGCTCTGTCTTaGCGGCTCGGTCCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: LGKPHPNEPCQTALAISSLPALS*RLGPRP
Trigger: CGGCCGGGGACCGAGCCGCAAAGACAGAGCGGGCAG...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367162.8
CDS CCA 90 bp AGCGGAGGCGCCGAAGCTTACAGCTCTCCTCACTGCCCAGCTTGGTaGTGGGAAGCACCTGCACCCCCAACAGCAGATTCAACAGCTGGC +
Preference number: 5 (lower is better)
Translates to: SGGAEAYSSPHCPAW*WEAPAPPTADSTAG
Trigger: GCCAGCTGTTGAATCTGCTGTTGGGGGTGCAGGTGCTTCCCACCACCAAGCTGGGCAGTGAGGAGAGCTGTAAGCTTCGGCGCCTCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 90 bp GGAGGCGCCGAAGCTTACAGCTCTCCTCACTGCCCAGCTTGGTGGTaGGAAGCACCTGCACCCCCAACAGCAGATTCAACAGCTGGCACT +
Preference number: 5 (lower is better)
Translates to: GGAEAYSSPHCPAWW*EAPAPPTADSTAGT
Trigger: AGTGCCAGCTGTTGAATCTGCTGTTGGGGGTGCAGGTGCTTCCCACCACCAAGCTGGGCAGTGAGGAGAGCTGTAAGCTTCGGCGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCGGAAATGCAGCTCAGTaGGCCCGCCTGCAGCCCGGT +
Preference number: 5 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLGNAAQ*ARLQPG
Trigger: ACCGGGCTGCAGGCGGGCCAACTGAGCTGCATTTCC...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCTCCTCACTGCCCAGCTaGGTGGTGGGAAGCACCTGC +
Preference number: 5 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLSSLPS*VVGSTC
Trigger: GCAGGTGCTTCCCACCACCAAGCTGGGCAGTGAGGA...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGTGTGGGCCGGAGGCCTaGGCATGGTGCTACCACAAC +
Preference number: 5 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLCGPEA*AWCYHN
Trigger: GTTGTGGTAGCACCATGCCAAGGCCTCCGGCCCACA...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 90 bp AGAGGCCTCTTCAAGGGGTCGCCATCCCAACAGGCTTCCATCAACTaGCAGCACTCCTCATCAAACACAGGAAGACGTTCTGGGCGAGCC +
Preference number: 5 (lower is better)
Translates to: RGLFKGSPSQQASIN*QHSSSNTGRRSGRA
Trigger: GGCTCGCCCAGAACGTCTTCCTGTGTTTGATGAGGAGTGCTGGCAGTTGATGGAAGCCTGTTGGGATGGCGACCCCTTGAAGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 90 bp AGGGAGGCAGTCCACAATCTGCTGGAGGTACTTCTCTTCCTTAGGTaGGAAGGAAATGCAGCTCAGTTGGCCCGCCTGCAGCCCGGTTTC +
Preference number: 5 (lower is better)
Translates to: REAVHNLLEVLLFLR*EGNAAQLARLQPGF
Trigger: GAAACCGGGCTGCAGGCGGGCCAACTGAGCTGCATTTCCTTCCCACCTAAGGAAGAGAAGTACCTCCAGCAGATTGTGGACTGCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 90 bp ATGCTCTTAGCCAATTTGGAGGCGCTGAGGCTCTCAATGGCTTCCTaGGCCACCTTCCTCTTCCATTCCAGAGTGATGGCAGGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: MLLANLEALRLSMAS*ATFLFHSRVMAGGL
Trigger: GAGCCCACCTGCCATCACTCTGGAATGGAAGAGGAAGGTGGCCCAGGAAGCCATTGAGAGCCTCAGCGCCTCCAAATTGGCTAAGAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS CCA 90 bp GAGTGGCCAGCTTCCAGCTGCCGCAAGGAGGCTGCAAAAGCCTCGTaGGAACTATTGAGCCGAGTCCGGAATTGGCTGCAAATGCTCTTA +
Preference number: 5 (lower is better)
Translates to: EWPASSCRKEAAKAS*ELLSRVRNWLQMLL
Trigger: TAAGAGCATTTGCAGCCAATTCCGGACTCGGCTCAATAGTTCCCACGAGGCTTTTGCAGCCTCCTTGCGGCAGCTGGAAGCTGGCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS-3UTR CAA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGAGTGCAGTTGTCACTTaGCAGCCCTGCAACCCCGAG +
Preference number: 5 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLSAVVT*QPCNPE
Trigger: CTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACT...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS TCA 90 bp TGGGAAGCACCTGCACCCCCAACAGCAGATTCAACAGCTGGCACTTaGCGTTACAATCCTGGCCGAGGATCAGTATGCAAGGGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: WEAPAPPTADSTAGT*RYNPGRGSVCKGGS
Trigger: ACTGCCTCCCTTGCATACTGATCCTCGGCCAGGATTGTAACGTCAAGTGCCAGCTGTTGAATCTGCTGTTGGGGGTGCAGGTGCTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 90 bp TTGGTGGTGGGAAGCACCTGCACCCCCAACAGCAGATTCAACAGCTaGCACTTGACGTTACAATCCTGGCCGAGGATCAGTATGCAAGGG +
Preference number: 5 (lower is better)
Translates to: LVVGSTCTPNSRFNS*HLTLQSWPRISMQG
Trigger: CCCTTGCATACTGATCCTCGGCCAGGATTGTAACGTCAAGTGCCAGCTGTTGAATCTGCTGTTGGGGGTGCAGGTGCTTCCCACCACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTATCCTCACTGCCCAGCTaGGTGGTGGGAAGCACCTGC +
Preference number: 5 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLSSLPS*VVGSTC
Trigger: GCAGGTGCTTCCCACCACCAAGCTGGGCAGTGAGGA...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAACCAGGTTCAGGGCCTaGGCTGCATCCACCAGGCGA +
Preference number: 5 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLTRFRA*AASTRR
Trigger: TCGCCTGGTGGATGCAGCCAAGGCCCTGAACCTGGT...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGGAGCCGAGTCCGGAATaGGCTGCAAATGCTCTTAGC +
Preference number: 5 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLEPSPE*AANALS
Trigger: GCTAAGAGCATTTGCAGCCAATTCCGGACTCGGCTC...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTAAGTGTCCTCCCCAGTaGTCACACAGGTATACCACA +
Preference number: 5 (lower is better)
Translates to: LGKPHPNEPCQTALAISSKCPPQ*SHRYTT
Trigger: TGTGGTATACCTGTGTGACAACTGGGGAGGACACTT...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTCCTAAGTCAGTGATCTaGGCACGGTTCTGCTTATCC +
Preference number: 5 (lower is better)
Translates to: LGKPHPNEPCQTALAISSPKSVI*ARFCLS
Trigger: GGATAAGCAGAACCGTGCCAAGATCACTGACTTAGG...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 90 bp TGTTCTCTTGGACCTCCAGATCCTCCTCAGGGATGGTCTCCCAGTTaGCCTGATGAGCAACCAGCGTGTGCACTAGTTCATACTGTCCAG +
Preference number: 5 (lower is better)
Translates to: CSLGPPDPPQGWSPS*PDEQPACALVHTVQ
Trigger: CTGGACAGTATGAACTAGTGCACACGCTGGTTGCTCATCAGGGCAACTGGGAGACCATCCCTGAGGAGGATCTGGAGGTCCAAGAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 90 bp ACCCCCAACAGCAGATTCAACAGCTGGCACTTGACGTTACAATCCTaGCCGAGGATCAGTATGCAAGGGAGGCAGTCCACAATCTGCTGG +
Preference number: 5 (lower is better)
Translates to: TPNSRFNSWHLTLQS*PRISMQGRQSTICW
Trigger: CCAGCAGATTGTGGACTGCCTCCCTTGCATACTGATCCTCGGCCAGGATTGTAACGTCAAGTGCCAGCTGTTGAATCTGCTGTTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 90 bp GAGGCTGCAAAAGCCTCGTGGGAACTATTGAGCCGAGTCCGGAATTaGCTGCAAATGCTCTTAGCCAATTTGGAGGCGCTGAGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: EAAKASWELLSRVRN*LQMLLANLEALRLS
Trigger: TGAGAGCCTCAGCGCCTCCAAATTGGCTAAGAGCATTTGCAGCCAATTCCGGACTCGGCTCAATAGTTCCCACGAGGCTTTTGCAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS-3UTR CAA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGGGAGGGACAACTGATTaGAGGGCACAAGGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLGGTTD*RAQGKC
Trigger: ACACTTCCCTTGTGCCCTCAAATCAGTTGTCCCTCC...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTTGCTCAGAATTGGACTaGCAGAGCCGATTCATGATG +
Preference number: 5 (lower is better)
Translates to: LGKPHPNEPCQTALAISSCSELD*QSRFMM
Trigger: CATCATGAATCGGCTCTGCAAGTCCAATTCTGAGCA...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 90 bp CAATCCTGGCCGAGGATCAGTATGCAAGGGAGGCAGTCCACAATCTaGTGGAGGTACTTCTCTTCCTTAGGTGGGAAGGAAATGCAGCTC +
Preference number: 5 (lower is better)
Translates to: QSWPRISMQGRQSTI*WRYFSSLGGKEMQL
Trigger: GAGCTGCATTTCCTTCCCACCTAAGGAAGAGAAGTACCTCCAGCAGATTGTGGACTGCCTCCCTTGCATACTGATCCTCGGCCAGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 90 bp TGCATGTCAAATGCCTGGTTAATAAAGATGTCAAGGCAGTGGCAGTaGACCAGGTTCAGGGCCTTGGCTGCATCCACCAGGCGAGTCTGT +
Preference number: 5 (lower is better)
Translates to: CMSNAWLIKMSRQWQ*TRFRALAASTRRVC
Trigger: ACAGACTCGCCTGGTGGATGCAGCCAAGGCCCTGAACCTGGTGCACTGCCACTGCCTTGACATCTTTATTAACCAGGCATTTGACATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 90 bp TCCTGGCCGAGGATCAGTATGCAAGGGAGGCAGTCCACAATCTGCTaGAGGTACTTCTCTTCCTTAGGTGGGAAGGAAATGCAGCTCAGT +
Preference number: 5 (lower is better)
Translates to: SWPRISMQGRQSTIC*RYFSSLGGKEMQLS
Trigger: ACTGAGCTGCATTTCCTTCCCACCTAAGGAAGAGAAGTACCTCCAGCAGATTGTGGACTGCCTCCCTTGCATACTGATCCTCGGCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGCCTAAGTCAGTGATCTaGGCACGGTTCTGCTTATCC +
Preference number: 5 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLPKSVI*ARFCLS
Trigger: GGATAAGCAGAACCGTGCCAAGATCACTGACTTAGG...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGTTTGGCTGCTCAGAATaGGACTTGCAGAGCCGATTC +
Preference number: 5 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLFGCSE*DLQSRF
Trigger: GAATCGGCTCTGCAAGTCCAATTCTGAGCAGCCAAA...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCATTGGCCAGGCTGCTCTaGAACTCTGGACCTTGTGAT +
Preference number: 5 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSLARLL*NSGPCD
Trigger: ATCACAAGGTCCAGAGTTCAAGAGCAGCCTGGCCAA...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTCCCAAATACTTCGCATaGGGTTGGTTTTGCTTAGAC +
Preference number: 5 (lower is better)
Translates to: LGKPHPNEPCQTALAISSPKYFA*GWFCLD
Trigger: GTCTAAGCAAAACCAACCCAATGCGAAGTATTTGGG...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTTCTGTCCCCTTGAAGTaGATGGAGTCAAAAGTGACT +
Preference number: 5 (lower is better)
Translates to: LGKPHPNEPCQTALAISSSVPLK*MESKVT
Trigger: AGTCACTTTTGACTCCATCAACTTCAAGGGGACAGA...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS TCA 90 bp GAGCACAGCAATGCTGGAGCCACCACCATAGTTGTAGTCAATGACTaGACCATGGAGATCCACCAATCGCTCATGCTTCGGCAGAGACCT +
Preference number: 5 (lower is better)
Translates to: EHSNAGATTIVVVND*TMEIHQSLMLRQRP
Trigger: AGGTCTCTGCCGAAGCATGAGCGATTGGTGGATCTCCATGGTTCAGTCATTGACTACAACTATGGTGGTGGCTCCAGCATTGCTGTGCTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 90 bp AGACGTTTGGGAGTGATCTGCAGGTCCCGCTGCATGTCAAATGCCTaGTTAATAAAGATGTCAAGGCAGTGGCAGTGCACCAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: RRLGVICRSRCMSNA*LIKMSRQWQCTRFR
Trigger: CCTGAACCTGGTGCACTGCCACTGCCTTGACATCTTTATTAACCAGGCATTTGACATGCAGCGGGACCTGCAGATCACTCCCAAACGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTGAGAGACAAGTGTGGTaGTGGGAGCACTTGATGTCG +
Preference number: 5 (lower is better)
Translates to: LQESLEYKCLKATPSLPTERQVW*WEHLMS
Trigger: CGACATCAAGTGCTCCCACAACCACACTTGTCTCTC...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCCGCTGGATGATCTGTTaGATTTGCTCCCATAGCATC +
Preference number: 5 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLRWMIC*ICSHSI
Trigger: GATGCTATGGGAGCAAATCAAACAGATCATCCAGCG...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAAAGTGTCCTCCCCAGTaGTCACACAGGTATACCACA +
Preference number: 5 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSKCPPQ*SHRYTT
Trigger: TGTGGTATACCTGTGTGACAACTGGGGAGGACACTT...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCATTTGGCTGCTCAGAATaGGACTTGCAGAGCCGATTC +
Preference number: 5 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSFGCSE*DLQSRF
Trigger: GAATCGGCTCTGCAAGTCCAATTCTGAGCAGCCAAA...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTATACTTCGCATTGGGTaGGTTTTGCTTAGACACTCA +
Preference number: 5 (lower is better)
Translates to: LGKPHPNEPCQTALAISSILRIG*VLLRHS
Trigger: TGAGTGTCTAAGCAAAACCAACCCAATGCGAAGTAT...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTGCACCAATATTTAAATaGTTCCCCTTCCTCTGCCTA +
Preference number: 5 (lower is better)
Translates to: LGKPHPNEPCQTALAISSAPIFK*FPFLCL
Trigger: TAGGCAGAGGAAGGGGAACAATTTAAATATTGGTGC...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCACTTACCCCTCCTTTCTaGACACCTGACTCCCTTGAA +
Preference number: 5 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSLTPPF*TPDSLE
Trigger: TTCAAGGGAGTCAGGTGTCAAGAAAGGAGGGGTAAG...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGAGTGCAGTTGTCACTTaGCAGCCCTGCAACCCCGAG +
Preference number: 5 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLSAVVT*QPCNPE
Trigger: CTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACT...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS TCA 90 bp TGTAAAGAACAGCTTTCCAGAGAAAGGCGGGCCAGGCGGGGAGCATaGTCTTTCCGAACCCTCAGCCATAGATCTTCCGTTTTCTCTAAC +
Preference number: 5 (lower is better)
Translates to: CKEQLSRERRARRGA*SFRTLSHRSSVFSN
Trigger: GTTAGAGAAAACGGAAGATCTATGGCTGAGGGTTCGGAAAGATCATGCTCCCCGCCTGGCCCGCCTTTCTCTGGAAAGCTGTTCTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS TCA 90 bp TTCCAAAGCCAGATCATTCCAGTGCTTCTCATCTGGAGGGACAACTaGTTTGAGGGCACAAGGGAAGTGTCCTCCCCAGTTGTCACACAG +
Preference number: 5 (lower is better)
Translates to: FQSQIIPVLLIWRDN*FEGTREVSSPVVTQ
Trigger: CTGTGTGACAACTGGGGAGGACACTTCCCTTGTGCCCTCAAATCAGTTGTCCCTCCAGATGAGAAGCACTGGAATGATCTGGCTTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS GCA 90 bp TTCCAGACGTTTGGGAGTGATCTGCAGGTCCCGCTGCATGTCAAATaGCTGGTTAATAAAGATGTCAAGGCAGTGGCAGTGCACCAGGTT +
Preference number: 5 (lower is better)
Translates to: FQTFGSDLQVPLHVK*LVNKDVKAVAVHQV
Trigger: AACCTGGTGCACTGCCACTGCCTTGACATCTTTATTAACCAGGCATTTGACATGCAGCGGGACCTGCAGATCACTCCCAAACGTCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 90 bp CGGTTCTGCTTATCCAGCAGCACATTTTTCAGTTTGATATCACGATaGACAAGTCCCTGGCTGTGCAGGAAGCGGATTCCCTCCACCACA +
Preference number: 5 (lower is better)
Translates to: RFCLSSSTFFSLISR*TSPWLCRKRIPSTT
Trigger: TGTGGTGGAGGGAATCCGCTTCCTGCACAGCCAGGGACTTGTCCATCGTGATATCAAACTGAAAAATGTGCTGCTGGATAAGCAGAACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGTTTCTTCCAGTATGTTaGTACATAGGCCATGGCCTC +
Preference number: 5 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLFLPVC*YIGHGL
Trigger: GAGGCCATGGCCTATGTACAAACATACTGGAAGAAA...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAGCCAGACCACAGTTATaGGGGATTAGGCAGATGGAG +
Preference number: 5 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLARPQL*GIRQME
Trigger: CTCCATCTGCCTAATCCCCAATAACTGTGGTCTGGC...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGATCTCACCTCACCACTaGGGAACACATACAACCAAA +
Preference number: 5 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLISPHH*GTHTTK
Trigger: TTTGGTTGTATGTGTTCCCAAGTGGTGAGGTGAGAT...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCATCTCACCTCACCACTaGGGAACACATACAACCAAA +
Preference number: 5 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLISPHH*GTHTTK
Trigger: TTTGGTTGTATGTGTTCCCAAGTGGTGAGGTGAGAT...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCTCTGTCCCCTTGAAGTaGATGGAGTCAAAAGTGACT +
Preference number: 5 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLSVPLK*MESKVT
Trigger: AGTCACTTTTGACTCCATCAACTTCAAGGGGACAGA...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS TCA 90 bp ACATCGTTCCAGGGTTCCGACGAAGCTTTCCCTCAGGTAATCCACTaGGCTGATCAGCTTATTAGCCACTGCCTGATTAAGTCGGGAGAT +
Preference number: 5 (lower is better)
Translates to: TSFQGSDEAFPQVIH*ADQLISHCLIKSGD
Trigger: ATCTCCCGACTTAATCAGGCAGTGGCTAATAAGCTGATCAGCTCAGTGGATTACCTGAGGGAAAGCTTCGTCGGAACCCTGGAACGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGTGGTTGTGGGAGCACTaGATGTCGCGGAAGAACTTC +
Preference number: 5 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLWLWEH*MSRKNF
Trigger: GAAGTTCTTCCGCGACATCAAGTGCTCCCACAACCA...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAGATTTCCTGAAGCTCTaGCTCATCCCTCTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEADFLKL*LIPLRE
Trigger: CTCTCTGAGAGGGATGAGCAAGAGCTTCAGGAAATC...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGGCCTCGTGGGAACTATaGAGCCGAGTCCGGAATTGG +
Preference number: 5 (lower is better)
Translates to: INPESHLFKMHTIKTVLLASWEL*SRVRNW
Trigger: CCAATTCCGGACTCGGCTCAATAGTTCCCACGAGGC...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTGGGGAAACCCCACCCAAATGAGCCATGCCAGACAGCCCTTGCCATCAGCTCTAGCACATTTTTCAGTTaGATATCACGATGGACAAGT +
Preference number: 5 (lower is better)
Translates to: LGKPHPNEPCQTALAISSSTFFS*ISRWTS
Trigger: ACTTGTCCATCGTGATATCAAACTGAAAAATGTGCT...AGAGCTGATGGCAAGGGCTGTCTGGCATGGCTCATTTGGGTGGGGTTTCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CATGCTGAGCCCTCTATAACCCAAGTGCTGCCAGACTTCTTTGAAAACCTAGTGGCCAGACCACAGTTATaGGGGATTAGGCAGATGGAG +
Preference number: 5 (lower is better)
Translates to: HAEPSITQVLPDFFENLVARPQL*GIRQME
Trigger: CTCCATCTGCCTAATCCCCAATAACTGTGGTCTGGC...CACTAGGTTTTCAAAGAAGTCTGGCAGCACTTGGGTTATAGAGGGCTCAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAAACCTCCAGGAGAGTTaGGAATACAAGTGTCTCAAG +
Preference number: 5 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSNLQES*EYKCLK
Trigger: CTTGAGACACTTGTATTCCAAACTCTCCTGGAGGTT...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS TCA 90 bp TGCTGCCTGACATCATGGCCTCTGGCTTGCAGAATCCTAAGTCAGTaGTCTTGGCACGGTTCTGCTTATCCAGCAGCACATTTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: CCLTSWPLACRILSQ*SWHGSAYPAAHFSV
Trigger: AACTGAAAAATGTGCTGCTGGATAAGCAGAACCGTGCCAAGATCACTGACTTAGGATTCTGCAAGCCAGAGGCCATGATGTCAGGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTACCAGGTTCAGGGCCTaGGCTGCATCCACCAGGCGA +
Preference number: 5 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLTRFRA*AASTRR
Trigger: TCGCCTGGTGGATGCAGCCAAGGCCCTGAACCTGGT...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTACATCTAGTCCTCTGTTaGGCTGCTCAGAATTGGACT +
Preference number: 5 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLHLVLC*AAQNWT
Trigger: AGTCCAATTCTGAGCAGCCAAACAGAGGACTAGATG...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp GGTGGCCTCCCCAGTGCTAGATGTCCTGATGCACCTCTGAGATCACCTCAATTGAAAAGAAGGAACAAATaGCGGGAGAAATCGTGGTTA +
Preference number: 5 (lower is better)
Translates to: GGLPSARCPDAPLRSPQLKRRNK*REKSWL
Trigger: TAACCACGATTTCTCCCGCAATTTGTTCCTTCTTTT...CAATTGAGGTGATCTCAGAGGTGCATCAGGACATCTAGCACTGGGGAGGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAGCATGCCCGGCTAATTaGCAACTCATCTTATACACC +
Preference number: 5 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAACPAN*QLILYT
Trigger: GGTGTATAAGATGAGTTGCAAATTAGCCGGGCATGC...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp GTGACTCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCCTGAGATCACCTCAATaGGACTGGATGTTAACAAAA +
Preference number: 5 (lower is better)
Translates to: VTLFGLGTTSTVLLKRLLLRSPQ*DWMLTK
Trigger: TTTTGTTAACATCCAGTCCAATTGAGGTGATCTCAG...GAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 90 bp TTTCGAGTATATTCCAGACGTTTGGGAGTGATCTGCAGGTCCCGCTaGATGTCAAATGCCTGGTTAATAAAGATGTCAAGGCAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: FRVYSRRLGVICRSR*MSNAWLIKMSRQWQ
Trigger: CTGCCACTGCCTTGACATCTTTATTAACCAGGCATTTGACATGCAGCGGGACCTGCAGATCACTCCCAAACGTCTGGAATATACTCGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 90 bp AGCACATTTTTCAGTTTGATATCACGATGGACAAGTCCCTGGCTGTaGAGGAAGCGGATTCCCTCCACCACATCTAGTGCTATCTGCAAA +
Preference number: 5 (lower is better)
Translates to: STFFSLISRWTSPWL*RKRIPSTTSSAICK
Trigger: TTTGCAGATAGCACTAGATGTGGTGGAGGGAATCCGCTTCCTGCACAGCCAGGGACTTGTCCATCGTGATATCAAACTGAAAAATGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGGAGAGACAAGTGTGGTaGTGGGAGCACTTGATGTCG +
Preference number: 5 (lower is better)
Translates to: INPESHLFKMHTIKTVLLERQVW*WEHLMS
Trigger: CGACATCAAGTGCTCCCACAACCACACTTGTCTCTC...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTGCACCAATATTTAAATaGTTCCCCTTCCTCTGCCTA +
Preference number: 5 (lower is better)
Translates to: LQESLEYKCLKATPSLPTAPIFK*FPFLCL
Trigger: TAGGCAGAGGAAGGGGAACAATTTAAATATTGGTGC...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTCCAGGAGAGTTTGGAATACAAGTGTCTCAAGGCCACTCCCTCCTTACCCACTAAAATCTTTAGGACTTaGGTCATGCTGAGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: LQESLEYKCLKATPSLPTKIFRT*VMLSPL
Trigger: TAGAGGGCTCAGCATGACCAAAGTCCTAAAGATTTT...AGTGGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CTTGGTGATGTAACAGTGAAACCCTCCCCCAGAAACCAGGGATATGTGGTCCTAGCTGCCCTAATTATGTaGATTAGAAGGACAGACCAC +
Preference number: 5 (lower is better)
Translates to: LGDVTVKPSPRNQGYVVLAALIM*IRRTDH
Trigger: GTGGTCTGTCCTTCTAATCAACATAATTAGGGCAGC...TAGGACCACATATCCCTGGTTTCTGGGGGAGGGTTTCACTGTTACATCACCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGCTTTGTGACCCTTCTTaGGCAGCTCAAGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLLCDPS*AAQAKT
Trigger: TGTCTTTGCTTGAGCTGCCAAAGAAGGGTCACAAAG...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 90 bp CTGAAGCTCTTGCTCATCCCTCTCAGAGAGTTCATCTTTGTGGAGTaGATAGGTTATCACAGGCAAGAAATCATTCACCAAGTCACCCAG +
Preference number: 5 (lower is better)
Translates to: LKLLLIPLREFIFVE*IGYHRQEIIHQVTQ
Trigger: CTGGGTGACTTGGTGAATGATTTCTTGCCTGTGATAACCTATGCACTCCACAAAGATGAACTCTCTGAGAGGGATGAGCAAGAGCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 90 bp AAAGGTCTTTGCTTTCAAGTAGAATCATCTAGTCCTCTGTTTGGCTaGTCAGAATTGGACTTGCAGAGCCGATTCATGATGCCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: KGLCFQVESSSPLFG*SELDLQSRFMMPWS
Trigger: GCTCCAGGGCATCATGAATCGGCTCTGCAAGTCCAATTCTGAGCAGCCAAACAGAGGACTAGATGATTCTACTTGAAAGCAAAGACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACTGTGGGCCGGAGGCCTaGGCATGGTGCTACCACAAC +
Preference number: 5 (lower is better)
Translates to: SITYNKNGCQRTKPKLADCGPEA*AWCYHN
Trigger: GTTGTGGTAGCACCATGCCAAGGCCTCCGGCCCACA...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGTGTCGGATGCAGCATTaGATCTCTCTGGTGCCTACT +
Preference number: 5 (lower is better)
Translates to: INPESHLFKMHTIKTVLLCRMQH*ISLVPT
Trigger: AGTAGGCACCAGAGAGATCAAATGCTGCATCCGACA...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCATGCTCTTAGCCAATTaGGAGGCGCTGAGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPMLLAN*EALRLS
Trigger: TGAGAGCCTCAGCGCCTCCAAATTGGCTAAGAGCAT...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCTTGGCCAGGCTGCTCTaGAACTCTGGACCTTGTGAT +
Preference number: 5 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPLARLL*NSGPCD
Trigger: ATCACAAGGTCCAGAGTTCAAGAGCAGCCTGGCCAA...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGTTTCTTCCAGTATGTTaGTACATAGGCCATGGCCTC +
Preference number: 5 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLFLPVC*YIGHGL
Trigger: GAGGCCATGGCCTATGTACAAACATACTGGAAGAAA...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGTCAATGAGCTACTCTTaGCAGAGGATCAGGGAACTA +
Preference number: 5 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLSMSYS*QRIREL
Trigger: TAGTTCCCTGATCCTCTGCAAAGAGTAGCTCATTGA...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCTCTTTGGTCTGGGAACAACCAGCACAGTCCTCCTGAAGCGCTTGCTCAGTCAGAAAATCCAAAAGCTTaGGAAATTCCAGGAAAGCAA +
Preference number: 5 (lower is better)
Translates to: SLWSGNNQHSPPEALAQSENPKA*EIPGKQ
Trigger: TTGCTTTCCTGGAATTTCCAAAGCTTTTGGATTTTC...TGACTGAGCAAGCGCTTCAGGAGGACTGTGCTGGTTGTTCCCAGACCAAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGTTCCAGAGATGGTCTTaGCTAGCACACCTCTCAAAT +
Preference number: 5 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLFQRWS*LAHLSN
Trigger: ATTTGAGAGGTGTGCTAGCAAAGACCATCTCTGGAA...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367162.8
CDS-3UTR CAA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCGATTTCCTGAAGCTCTaGCTCATCCCTCTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPDFLKL*LIPLRE
Trigger: CTCTCTGAGAGGGATGAGCAAGAGCTTCAGGAAATC...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGCATCTAGTCCTCTGTTaGGCTGCTCAGAATTGGACT +
Preference number: 5 (lower is better)
Translates to: INPESHLFKMHTIKTVLLHLVLC*AAQNWT
Trigger: AGTCCAATTCTGAGCAGCCAAACAGAGGACTAGATG...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGATACTTCGCATTGGGTaGGTTTTGCTTAGACACTCA +
Preference number: 5 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLILRIG*VLLRHS
Trigger: TGAGTGTCTAAGCAAAACCAACCCAATGCGAAGTAT...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTTGGTTGTGGGAGCACTaGATGTCGCGGAAGAACTTC +
Preference number: 5 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLWLWEH*MSRKNF
Trigger: GAAGTTCTTCCGCGACATCAAGTGCTCCCACAACCA...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTATGCTCTTAGCCAATTaGGAGGCGCTGAGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLMLLAN*EALRLS
Trigger: TGAGAGCCTCAGCGCCTCCAAATTGGCTAAGAGCAT...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACGCCTCGTGGGAACTATaGAGCCGAGTCCGGAATTGG +
Preference number: 5 (lower is better)
Translates to: SITYNKNGCQRTKPKLADASWEL*SRVRNW
Trigger: CCAATTCCGGACTCGGCTCAATAGTTCCCACGAGGC...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAAGCACATTTTTCAGTTaGATATCACGATGGACAAGT +
Preference number: 5 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEASTFFS*ISRWTS
Trigger: ACTTGTCCATCGTGATATCAAACTGAAAAATGTGCT...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACCAGGGGCCATATGGATaGGTGTCCCCACAATGCTGC +
Preference number: 5 (lower is better)
Translates to: SITYNKNGCQRTKPKLADQGPYG*VSPQCC
Trigger: GCAGCATTGTGGGGACACCAATCCATATGGCCCCTG...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCTGCTCAGAATTGGACTaGCAGAGCCGATTCATGATG +
Preference number: 5 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPCSELD*QSRFMM
Trigger: CATCATGAATCGGCTCTGCAAGTCCAATTCTGAGCA...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTCAAGCACCAGTTCCCTaGGGAGTGTGTCCTATAGTG +
Preference number: 5 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLQAPVP*GVCPIV
Trigger: CACTATAGGACACACTCCCAAGGGAACTGGTGCTTG...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCCGCATTGGGTTGGTTTaGCTTAGACACTCACTCCTA +
Preference number: 5 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPRIGLV*LRHSLL
Trigger: TAGGAGTGAGTGTCTAAGCAAAACCAACCCAATGCG...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp AATAAAGTGTCATTCAGTGCAGTTGTCACTTTGCAGCCCTGCAACCCCGAGGCAGTGGTTAAAAGCTCATaGATCAAGTTTTCCAAACGT +
Preference number: 5 (lower is better)
Translates to: NKVSFSAVVTLQPCNPEAVVKSS*IKFSKR
Trigger: ACGTTTGGAAAACTTGATCAATGAGCTTTTAACCAC...TGCCTCGGGGTTGCAGGGCTGCAAAGTGACAACTGCACTGAATGACACTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TGCAACTCATCTTATACACCTACCTGGGGACCTGTTTTACAAACTCTCGGGCTGAAAAGAAGGAACAAATaGCGGGAGAAATCGTGGTTA +
Preference number: 5 (lower is better)
Translates to: CNSSYTPTWGPVLQTLGLKRRNK*REKSWL
Trigger: TAACCACGATTTCTCCCGCAATTTGTTCCTTCTTTT...CAGCCCGAGAGTTTGTAAAACAGGTCCCCAGGTAGGTGTATAAGATGAGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGTCAATGAGCTACTCTTaGCAGAGGATCAGGGAACTA +
Preference number: 5 (lower is better)
Translates to: INPESHLFKMHTIKTVLLSMSYS*QRIREL
Trigger: TAGTTCCCTGATCCTCTGCAAAGAGTAGCTCATTGA...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCCTAGGCTCTGTCCCCTaGAAGTTGATGGAGTCAAAA +
Preference number: 5 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPLGSVP*KLMESK
Trigger: TTTTGACTCCATCAACTTCAAGGGGACAGAGCCTAG...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGTCCTCCTGCTTTCGGTaGGCAATATTCATCAATGAT +
Preference number: 5 (lower is better)
Translates to: INPESHLFKMHTIKTVLLSSCFR*AIFIND
Trigger: ATCATTGATGAATATTGCCAACCGAAAGCAGGAGGA...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACGAGCCGAGTCCGGAATaGGCTGCAAATGCTCTTAGC +
Preference number: 5 (lower is better)
Translates to: SITYNKNGCQRTKPKLADEPSPE*AANALS
Trigger: GCTAAGAGCATTTGCAGCCAATTCCGGACTCGGCTC...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTTCTCCATTCTCCTGGTaGAGGAGTCTATTATCTCCG +
Preference number: 5 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLSPFSW*RSLLSP
Trigger: CGGAGATAATAGACTCCTCAACCAGGAGAATGGAGA...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGTGTCGGATGCAGCATTaGATCTCTCTGGTGCCTACT +
Preference number: 5 (lower is better)
Translates to: PFNITLMKINPESHLFKMCRMQH*ISLVPT
Trigger: AGTAGGCACCAGAGAGATCAAATGCTGCATCCGACA...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCTATACACACGTATACCTGCACTCAGCCTGCTGAGTATTTAAATAACATCCCCAAAATCTTTAGGACTTaGGTCATGCTGAGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: SIHTYTCTQPAEYLNNIPKIFRT*VMLSPL
Trigger: TAGAGGGCTCAGCATGACCAAAGTCCTAAAGATTTT...GGGGATGTTATTTAAATACTCAGCAGGCTGAGTGCAGGTATACGTGTGTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTCTTTGTGACCCTTCTTaGGCAGCTCAAGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLLCDPS*AAQAKT
Trigger: TGTCTTTGCTTGAGCTGCCAAAGAAGGGTCACAAAG...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp CCCTTCAATATTACACTAATGAAGATTAACCCAGAGTCGCATCTCTTCAAAATGGCATGCCCGGCTAATTaGCAACTCATCTTATACACC +
Preference number: 5 (lower is better)
Translates to: PFNITLMKINPESHLFKMACPAN*QLILYT
Trigger: GGTGTATAAGATGAGTTGCAAATTAGCCGGGCATGC...CATTTTGAAGAGATGCGACTCTGGGTTAATCTTCATTAGTGTAATATTGAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACCTTACCCCTCCTTTCTaGACACCTGACTCCCTTGAA +
Preference number: 5 (lower is better)
Translates to: SITYNKNGCQRTKPKLADLTPPF*TPDSLE
Trigger: TTCAAGGGAGTCAGGTGTCAAGAAAGGAGGGGTAAG...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp ATTAACCCAGAGTCGCATCTCTTCAAAATGCACACAATTAAGACGGTCCTGCTGGAAAATCCAAAAGCTTaGGAAATTCCAGGAAAGCAA +
Preference number: 5 (lower is better)
Translates to: INPESHLFKMHTIKTVLLENPKA*EIPGKQ
Trigger: TTGCTTTCCTGGAATTTCCAAAGCTTTTGGATTTTC...CAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGGTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTAACCTCCAGGAGAGTTaGGAATACAAGTGTCTCAAG +
Preference number: 5 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLNLQES*EYKCLK
Trigger: CTTGAGACACTTGTATTCCAAACTCTCCTGGAGGTT...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACTCTCCATTCTCCTGGTaGAGGAGTCTATTATCTCCG +
Preference number: 5 (lower is better)
Translates to: SITYNKNGCQRTKPKLADSPFSW*RSLLSP
Trigger: CGGAGATAATAGACTCCTCAACCAGGAGAATGGAGA...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACCGCTGGATGATCTGTTaGATTTGCTCCCATAGCATC +
Preference number: 5 (lower is better)
Translates to: SITYNKNGCQRTKPKLADRWMIC*ICSHSI
Trigger: GATGCTATGGGAGCAAATCAAACAGATCATCCAGCG...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp TCCATCACTTATAATAAGAATGGATGCCAAAGAACAAAGCCAAAATTAGCTGACCGCATTGGGTTGGTTTaGCTTAGACACTCACTCCTA +
Preference number: 5 (lower is better)
Translates to: SITYNKNGCQRTKPKLADRIGLV*LRHSLL
Trigger: TAGGAGTGAGTGTCTAAGCAAAACCAACCCAATGCG...GTCAGCTAATTTTGGCTTTGTTCTTTGGCATCCATTCTTATTATAAGTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS-3UTR CAA 90 bp AACAGACTTACAATGATTTTCCAGCAAGTAGAGAGTACTTACCCCTCCTTTCTTGTGGTTAAAAGCTCATaGATCAAGTTTTCCAAACGT +
Preference number: 5 (lower is better)
Translates to: NRLTMIFQQVESTYPSFLVVKSS*IKFSKR
Trigger: ACGTTTGGAAAACTTGATCAATGAGCTTTTAACCAC...AAGAAAGGAGGGGTAAGTACTCTCTACTTGCTGGAAAATCATTGTAAGTCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 90 bp TTCATGGTATTAAGTGTCTCAACAATCATATCCTTCATTTCCTCCTaGTTTCGGTTGGCAATATTCATCAATGATTCATACAACTCATTC +
Preference number: 5 (lower is better)
Translates to: FMVLSVSTIISFISS*FRLAIFINDSYNSF
Trigger: GAATGAGTTGTATGAATCATTGATGAATATTGCCAACCGAAAGCAGGAGGAAATGAAGGATATGATTGTTGAGACACTTAATACCATGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CAA 72 bp CCGCCGCCGCCCGTGAGGGAGGAGAGACAAGTGTGGTaGTGGGAGCACTTGATGTCGCGGAAGAACTTCTGG +
Preference number: 6 (lower is better)
Translates to: PPPPVREERQVW*WEHLMSRKNFW
Trigger: CCAGAAGTTCTTCCGCGACATCAAGTGCTCCCACAACCACACTTGTCTCTCCTCCCTCACGGGCGGCGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CAA 90 bp GTGAAGCGGAGGCGCCGAAGCTTACAGCTCTCCTCACTGCCCAGCTaGGTGGTGGGAAGCACCTGCACCCCCAACAGCAGATTCAACAGC +
Preference number: 6 (lower is better)
Translates to: VKRRRRSLQLSSLPS*VVGSTCTPNSRFNS
Trigger: GCTGTTGAATCTGCTGTTGGGGGTGCAGGTGCTTCCCACCACCAAGCTGGGCAGTGAGGAGAGCTGTAAGCTTCGGCGCCTCCGCTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 72 bp TGGTTGTGGGAGCACTTGATGTCGCGGAAGAACTTCTaGGTCTCGCGCAGGTTCTGTCGCAGCCGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: WLWEHLMSRKNF*VSRRFCRSRPR
Trigger: CCTGGGACGGCTGCGACAGAACCTGCGCGAGACCCAGAAGTTCTTCCGCGACATCAAGTGCTCCCACAACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 72 bp CCGCCGCCCGTGAGGGAGGAGAGACAAGTGTGGTTGTaGGAGCACTTGATGTCGCGGAAGAACTTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: PPPVREERQVWL*EHLMSRKNFWV
Trigger: GACCCAGAAGTTCTTCCGCGACATCAAGTGCTCCCACAACCACACTTGTCTCTCCTCCCTCACGGGCGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 72 bp TGTCAAGGCAGTGGCAGTGCACCAGGTTCAGGGCCTTaGCTGCATCCACCAGGCGAGTCTGTAACACCTGGT +
Preference number: 6 (lower is better)
Translates to: CQGSGSAPGSGP*LHPPGESVTPG
Trigger: ACCAGGTGTTACAGACTCGCCTGGTGGATGCAGCCAAGGCCCTGAACCTGGTGCACTGCCACTGCCTTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CAA 72 bp ATGTCAAGGCAGTGGCAGTGCACCAGGTTCAGGGCCTaGGCTGCATCCACCAGGCGAGTCTGTAACACCTGG +
Preference number: 6 (lower is better)
Translates to: MSRQWQCTRFRA*AASTRRVCNTW
Trigger: CCAGGTGTTACAGACTCGCCTGGTGGATGCAGCCAAGGCCCTGAACCTGGTGCACTGCCACTGCCTTGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CAA 90 bp GGAGGGACAACTGATTTGAGGGCACAAGGGAAGTGTCCTCCCCAGTaGTCACACAGGTATACCACACCATACTGGCCCCGGCCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: GGTTDLRAQGKCPPQ*SHRYTTPYWPRPSS
Trigger: GGAACTGGGCCGGGGCCAGTATGGTGTGGTATACCTGTGTGACAACTGGGGAGGACACTTCCCTTGTGCCCTCAAATCAGTTGTCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS CCA 72 bp GCTTCCAGCTGCCGCAAGGAGGCTGCAAAAGCCTCGTaGGAACTATTGAGCCGAGTCCGGAATTGGCTGCAA +
Preference number: 6 (lower is better)
Translates to: ASSCRKEAAKAS*ELLSRVRNWLQ
Trigger: TTGCAGCCAATTCCGGACTCGGCTCAATAGTTCCCACGAGGCTTTTGCAGCCTCCTTGCGGCAGCTGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS TCA 72 bp CAGCTTTCCAGAGAAAGGCGGGCCAGGCGGGGAGCATaGTCTTTCCGAACCCTCAGCCATAGATCTTCCGTT +
Preference number: 6 (lower is better)
Translates to: QLSRERRARRGA*SFRTLSHRSSV
Trigger: AACGGAAGATCTATGGCTGAGGGTTCGGAAAGATCATGCTCCCCGCCTGGCCCGCCTTTCTCTGGAAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS GCA 72 bp GGACCTCCAGATCCTCCTCAGGGATGGTCTCCCAGTTaGCCTGATGAGCAACCAGCGTGTGCACTAGTTCAT +
Preference number: 6 (lower is better)
Translates to: GPPDPPQGWSPS*PDEQPACALVH
Trigger: ATGAACTAGTGCACACGCTGGTTGCTCATCAGGGCAACTGGGAGACCATCCCTGAGGAGGATCTGGAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 72 bp GAAGCTTACAGCTCTCCTCACTGCCCAGCTTGGTGGTaGGAAGCACCTGCACCCCCAACAGCAGATTCAACA +
Preference number: 6 (lower is better)
Translates to: EAYSSPHCPAWW*EAPAPPTADST
Trigger: TGTTGAATCTGCTGTTGGGGGTGCAGGTGCTTCCCACCACCAAGCTGGGCAGTGAGGAGAGCTGTAAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 72 bp AAGTCACCCAGAACATCCACTGTGGGCCGGAGGCCTTaGCATGGTGCTACCACAACGTCCACTTCCTGTAAG +
Preference number: 6 (lower is better)
Translates to: KSPRTSTVGRRP*HGATTTSTSCK
Trigger: CTTACAGGAAGTGGACGTTGTGGTAGCACCATGCCAAGGCCTCCGGCCCACAGTGGATGTTCTGGGTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CAA 72 bp CGAGTCCGGAATTGGCTGCAAATGCTCTTAGCCAATTaGGAGGCGCTGAGGCTCTCAATGGCTTCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: RVRNWLQMLLAN*EALRLSMASWA
Trigger: GGCCCAGGAAGCCATTGAGAGCCTCAGCGCCTCCAAATTGGCTAAGAGCATTTGCAGCCAATTCCGGACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS CAA 90 bp GGAGGCTGCAAAAGCCTCGTGGGAACTATTGAGCCGAGTCCGGAATaGGCTGCAAATGCTCTTAGCCAATTTGGAGGCGCTGAGGCTCTC +
Preference number: 6 (lower is better)
Translates to: GGCKSLVGTIEPSPE*AANALSQFGGAEAL
Trigger: GAGAGCCTCAGCGCCTCCAAATTGGCTAAGAGCATTTGCAGCCAATTCCGGACTCGGCTCAATAGTTCCCACGAGGCTTTTGCAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS TCA 72 bp GGAGAATTGCTTGAACCGAGGAGACGGAGGCTGCAGTaGACTGAGATCACACCATGCACTCCAACCTGGGTG +
Preference number: 6 (lower is better)
Translates to: GELLEPRRRRLQ*TEITPCTPTWV
Trigger: CACCCAGGTTGGAGTGCATGGTGTGATCTCAGTTCACTGCAGCCTCCGTCTCCTCGGTTCAAGCAATTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615388.1
CDS CCA 72 bp GGAAGCACCTGCACCCCCAACAGCAGATTCAACAGCTaGCACTTGACGTTACAATCCTGGCCGAGGATCAGT +
Preference number: 6 (lower is better)
Translates to: GSTCTPNSRFNS*HLTLQSWPRIS
Trigger: ACTGATCCTCGGCCAGGATTGTAACGTCAAGTGCCAGCTGTTGAATCTGCTGTTGGGGGTGCAGGTGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 72 bp GGCCACCTTCCTCTTCCATTCCAGAGTGATGGCAGGTaGGCTCACCCATGTGATGCGCTGGATGATCTGTTT +
Preference number: 6 (lower is better)
Translates to: GHLPLPFQSDGR*AHPCDALDDLF
Trigger: AAACAGATCATCCAGCGCATCACATGGGTGAGCCCACCTGCCATCACTCTGGAATGGAAGAGGAAGGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS CCA 72 bp AGCCATAGATCTTCCGTTTTCTCTAACCGGCCTGAGTaGCCAGCTTCCAGCTGCCGCAAGGAGGCTGCAAAA +
Preference number: 6 (lower is better)
Translates to: SHRSSVFSNRPE*PASSCRKEAAK
Trigger: TTTTGCAGCCTCCTTGCGGCAGCTGGAAGCTGGCCACTCAGGCCGGTTAGAGAAAACGGAAGATCTATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS CCA 72 bp CCTCCCCAGTTGTCACACAGGTATACCACACCATACTaGCCCCGGCCCAGTTCCTGTCCCAGTTTAGGTTTA +
Preference number: 6 (lower is better)
Translates to: PPQLSHRYTTPY*PRPSSCPSLGL
Trigger: TAAACCTAAACTGGGACAGGAACTGGGCCGGGGCCAGTATGGTGTGGTATACCTGTGTGACAACTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS CAA 72 bp ACTGATTTGAGGGCACAAGGGAAGTGTCCTCCCCAGTaGTCACACAGGTATACCACACCATACTGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: TDLRAQGKCPPQ*SHRYTTPYWPR
Trigger: CCGGGGCCAGTATGGTGTGGTATACCTGTGTGACAACTGGGGAGGACACTTCCCTTGTGCCCTCAAATCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS CAA 90 bp GCTTCCAGCTGCCGCAAGGAGGCTGCAAAAGCCTCGTGGGAACTATaGAGCCGAGTCCGGAATTGGCTGCAAATGCTCTTAGCCAATTTG +
Preference number: 6 (lower is better)
Translates to: ASSCRKEAAKASWEL*SRVRNWLQMLLANL
Trigger: CAAATTGGCTAAGAGCATTTGCAGCCAATTCCGGACTCGGCTCAATAGTTCCCACGAGGCTTTTGCAGCCTCCTTGCGGCAGCTGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS TCA 72 bp CCTGCACCCCCAACAGCAGATTCAACAGCTGGCACTTaGCGTTACAATCCTGGCCGAGGATCAGTATGCAAG +
Preference number: 6 (lower is better)
Translates to: PAPPTADSTAGT*RYNPGRGSVCK
Trigger: CTTGCATACTGATCCTCGGCCAGGATTGTAACGTCAAGTGCCAGCTGTTGAATCTGCTGTTGGGGGTGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 72 bp TATCCTGGCCAGGAGCCCCACAGTTCCAGTGACTGCTaGTCAGATAGCCCAGGTCAATTAGCTGGCGATAAA +
Preference number: 6 (lower is better)
Translates to: YPGQEPHSSSDC*SDSPGQLAGDK
Trigger: TTTATCGCCAGCTAATTGACCTGGGCTATCTGAGCAGCAGTCACTGGAACTGTGGGGCTCCTGGCCAGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 72 bp AATGCCTGGTTAATAAAGATGTCAAGGCAGTGGCAGTaGACCAGGTTCAGGGCCTTGGCTGCATCCACCAGG +
Preference number: 6 (lower is better)
Translates to: NAWLIKMSRQWQ*TRFRALAASTR
Trigger: CCTGGTGGATGCAGCCAAGGCCCTGAACCTGGTGCACTGCCACTGCCTTGACATCTTTATTAACCAGGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 72 bp GTTCAGGGGCCATATGGATTGGTGTCCCCACAATGCTaGCTGACATCATGGCCTCTGGCTTGCAGAATCCTA +
Preference number: 6 (lower is better)
Translates to: VQGPYGLVSPQC*LTSWPLACRIL
Trigger: TAGGATTCTGCAAGCCAGAGGCCATGATGTCAGGCAGCATTGTGGGGACACCAATCCATATGGCCCCTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CAA 72 bp TGCCGCAAGGAGGCTGCAAAAGCCTCGTGGGAACTATaGAGCCGAGTCCGGAATTGGCTGCAAATGCTCTTA +
Preference number: 6 (lower is better)
Translates to: CRKEAAKASWEL*SRVRNWLQMLL
Trigger: TAAGAGCATTTGCAGCCAATTCCGGACTCGGCTCAATAGTTCCCACGAGGCTTTTGCAGCCTCCTTGCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS CAA 72 bp GTCCCCACAATGCTGCCTGACATCATGGCCTCTGGCTaGCAGAATCCTAAGTCAGTGATCTTGGCACGGTTC +
Preference number: 6 (lower is better)
Translates to: VPTMLPDIMASG*QNPKSVILARF
Trigger: GAACCGTGCCAAGATCACTGACTTAGGATTCTGCAAGCCAGAGGCCATGATGTCAGGCAGCATTGTGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 72 bp CCGAGGATCAGTATGCAAGGGAGGCAGTCCACAATCTaGTGGAGGTACTTCTCTTCCTTAGGTGGGAAGGAA +
Preference number: 6 (lower is better)
Translates to: PRISMQGRQSTI*WRYFSSLGGKE
Trigger: TTCCTTCCCACCTAAGGAAGAGAAGTACCTCCAGCAGATTGTGGACTGCCTCCCTTGCATACTGATCCTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 72 bp AAAGTTCAGGGGCCATATGGATTGGTGTCCCCACAATaGTGCCTGACATCATGGCCTCTGGCTTGCAGAATC +
Preference number: 6 (lower is better)
Translates to: KVQGPYGLVSPQ*CLTSWPLACRI
Trigger: GATTCTGCAAGCCAGAGGCCATGATGTCAGGCAGCATTGTGGGGACACCAATCCATATGGCCCCTGAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 72 bp TTCAAGGGGTCGCCATCCCAACAGGCTTCCATCAACTaGCAGCACTCCTCATCAAACACAGGAAGACGTTCT +
Preference number: 6 (lower is better)
Translates to: FKGSPSQQASIN*QHSSSNTGRRS
Trigger: AGAACGTCTTCCTGTGTTTGATGAGGAGTGCTGGCAGTTGATGGAAGCCTGTTGGGATGGCGACCCCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 72 bp AGCAGATTCAACAGCTGGCACTTGACGTTACAATCCTaGCCGAGGATCAGTATGCAAGGGAGGCAGTCCACA +
Preference number: 6 (lower is better)
Translates to: SRFNSWHLTLQS*PRISMQGRQST
Trigger: TGTGGACTGCCTCCCTTGCATACTGATCCTCGGCCAGGATTGTAACGTCAAGTGCCAGCTGTTGAATCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CAA 72 bp TCATCTAGTCCTCTGTTTGGCTGCTCAGAATTGGACTaGCAGAGCCGATTCATGATGCCCTGGAGCATGGGC +
Preference number: 6 (lower is better)
Translates to: SSSPLFGCSELD*QSRFMMPWSMG
Trigger: GCCCATGCTCCAGGGCATCATGAATCGGCTCTGCAAGTCCAATTCTGAGCAGCCAAACAGAGGACTAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CAA 90 bp TGGATTGGTGTCCCCACAATGCTGCCTGACATCATGGCCTCTGGCTaGCAGAATCCTAAGTCAGTGATCTTGGCACGGTTCTGCTTATCC +
Preference number: 6 (lower is better)
Translates to: WIGVPTMLPDIMASG*QNPKSVILARFCLS
Trigger: GGATAAGCAGAACCGTGCCAAGATCACTGACTTAGGATTCTGCAAGCCAGAGGCCATGATGTCAGGCAGCATTGTGGGGACACCAATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS TCA 72 bp TGTCTCAGCTTTTCACTCTGTTCCACCAACATGCTCTaGGCTTTAGTATCCTGGCCAGGAGCCCCACAGTTC +
Preference number: 6 (lower is better)
Translates to: CLSFSLCSTNML*ALVSWPGAPQF
Trigger: GAACTGTGGGGCTCCTGGCCAGGATACTAAAGCTCAGAGCATGTTGGTGGAACAGAGTGAAAAGCTGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS TCA 72 bp CAGATCATTCCAGTGCTTCTCATCTGGAGGGACAACTaGTTTGAGGGCACAAGGGAAGTGTCCTCCCCAGTT +
Preference number: 6 (lower is better)
Translates to: QIIPVLLIWRDN*FEGTREVSSPV
Trigger: AACTGGGGAGGACACTTCCCTTGTGCCCTCAAATCAGTTGTCCCTCCAGATGAGAAGCACTGGAATGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS GCA 72 bp TTCAGTTTGATATCACGATGGACAAGTCCCTGGCTGTaGAGGAAGCGGATTCCCTCCACCACATCTAGTGCT +
Preference number: 6 (lower is better)
Translates to: FSLISRWTSPWL*RKRIPSTTSSA
Trigger: AGCACTAGATGTGGTGGAGGGAATCCGCTTCCTGCACAGCCAGGGACTTGTCCATCGTGATATCAAACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 72 bp GGCGATAAAGCGGTGATCTTTCGCTCTCCATTCTCCTaGTTGAGGAGTCTATTATCTCCGAGCCCAGTTTCG +
Preference number: 6 (lower is better)
Translates to: GDKAVIFRSPFS*LRSLLSPSPVS
Trigger: CGAAACTGGGCTCGGAGATAATAGACTCCTCAACCAGGAGAATGGAGAGCGAAAGATCACCGCTTTATCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 72 bp ATGTCAAATGCCTGGTTAATAAAGATGTCAAGGCAGTaGCAGTGCACCAGGTTCAGGGCCTTGGCTGCATCC +
Preference number: 6 (lower is better)
Translates to: MSNAWLIKMSRQ*QCTRFRALAAS
Trigger: GGATGCAGCCAAGGCCCTGAACCTGGTGCACTGCCACTGCCTTGACATCTTTATTAACCAGGCATTTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CAA 72 bp AAAAGCCTCGTGGGAACTATTGAGCCGAGTCCGGAATaGGCTGCAAATGCTCTTAGCCAATTTGGAGGCGCT +
Preference number: 6 (lower is better)
Translates to: KSLVGTIEPSPE*AANALSQFGGA
Trigger: AGCGCCTCCAAATTGGCTAAGAGCATTTGCAGCCAATTCCGGACTCGGCTCAATAGTTCCCACGAGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367161.7
ENST00000367162.8
ENST00000615388.1
CDS CAA 90 bp CAAGTAGAATCATCTAGTCCTCTGTTTGGCTGCTCAGAATTGGACTaGCAGAGCCGATTCATGATGCCCTGGAGCATGGGCTGGACAATG +
Preference number: 6 (lower is better)
Translates to: QVESSSPLFGCSELD*QSRFMMPWSMGWTM
Trigger: CATTGTCCAGCCCATGCTCCAGGGCATCATGAATCGGCTCTGCAAGTCCAATTCTGAGCAGCCAAACAGAGGACTAGATGATTCTACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS TCA 72 bp GCATGGTGCATCGTTACCTCCAGTTCCGCTAAAACATaGGCAGCATCCTCATTGTTCTCTTGGACCTCCAGA +
Preference number: 6 (lower is better)
Translates to: AWCIVTSSSAKT*AASSLFSWTSR
Trigger: TCTGGAGGTCCAAGAGAACAATGAGGATGCTGCTCATGTTTTAGCGGAACTGGAGGTAACGATGCACCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS TCA 72 bp CAGGGTTCCGACGAAGCTTTCCCTCAGGTAATCCACTaGGCTGATCAGCTTATTAGCCACTGCCTGATTAAG +
Preference number: 6 (lower is better)
Translates to: QGSDEAFPQVIH*ADQLISHCLIK
Trigger: CTTAATCAGGCAGTGGCTAATAAGCTGATCAGCTCAGTGGATTACCTGAGGGAAAGCTTCGTCGGAACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS TCA 72 bp AATGCTGGAGCCACCACCATAGTTGTAGTCAATGACTaGACCATGGAGATCCACCAATCGCTCATGCTTCGG +
Preference number: 6 (lower is better)
Translates to: NAGATTIVVVND*TMEIHQSLMLR
Trigger: CCGAAGCATGAGCGATTGGTGGATCTCCATGGTTCAGTCATTGACTACAACTATGGTGGTGGCTCCAGCATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS TCA 72 bp CAGCAATGCTGGAGCCACCACCATAGTTGTAGTCAATaGCTGAACCATGGAGATCCACCAATCGCTCATGCT +
Preference number: 6 (lower is better)
Translates to: QQCWSHHHSCSQ*LNHGDPPIAHA
Trigger: AGCATGAGCGATTGGTGGATCTCCATGGTTCAGTCATTGACTACAACTATGGTGGTGGCTCCAGCATTGCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS TCA 72 bp ACATCATGGCCTCTGGCTTGCAGAATCCTAAGTCAGTaGTCTTGGCACGGTTCTGCTTATCCAGCAGCACAT +
Preference number: 6 (lower is better)
Translates to: TSWPLACRILSQ*SWHGSAYPAAH
Trigger: ATGTGCTGCTGGATAAGCAGAACCGTGCCAAGATCACTGACTTAGGATTCTGCAAGCCAGAGGCCATGATGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 72 bp TTTGGGAGTGATCTGCAGGTCCCGCTGCATGTCAAATaGCTGGTTAATAAAGATGTCAAGGCAGTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: FGSDLQVPLHVK*LVNKDVKAVAV
Trigger: CACTGCCACTGCCTTGACATCTTTATTAACCAGGCATTTGACATGCAGCGGGACCTGCAGATCACTCCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 72 bp AGGATCAGTATGCAAGGGAGGCAGTCCACAATCTGCTaGAGGTACTTCTCTTCCTTAGGTGGGAAGGAAATG +
Preference number: 6 (lower is better)
Translates to: RISMQGRQSTIC*RYFSSLGGKEM
Trigger: CATTTCCTTCCCACCTAAGGAAGAGAAGTACCTCCAGCAGATTGTGGACTGCCTCCCTTGCATACTGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CAA 72 bp GATAAAGCGGTGATCTTTCGCTCTCCATTCTCCTGGTaGAGGAGTCTATTATCTCCGAGCCCAGTTTCGGCA +
Preference number: 6 (lower is better)
Translates to: DKAVIFRSPFSW*RSLLSPSPVSA
Trigger: TGCCGAAACTGGGCTCGGAGATAATAGACTCCTCAACCAGGAGAATGGAGAGCGAAAGATCACCGCTTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CAA 72 bp GTAGAATCATCTAGTCCTCTGTTTGGCTGCTCAGAATaGGACTTGCAGAGCCGATTCATGATGCCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: VESSSPLFGCSE*DLQSRFMMPWS
Trigger: GCTCCAGGGCATCATGAATCGGCTCTGCAAGTCCAATTCTGAGCAGCCAAACAGAGGACTAGATGATTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CAA 90 bp TTAAGTCGGGAGATGATGAGTTCCTGGATCTGTCGGATGCAGCATTaGATCTCTCTGGTGCCTACTGGTTCTCCATTCTCAGGGACAATG +
Preference number: 6 (lower is better)
Translates to: LSREMMSSWICRMQH*ISLVPTGSPFSGTM
Trigger: CATTGTCCCTGAGAATGGAGAACCAGTAGGCACCAGAGAGATCAAATGCTGCATCCGACAGATCCAGGAACTCATCATCTCCCGACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS TCA 72 bp CACGGTTCTGCTTATCCAGCAGCACATTTTTCAGTTTaGTATCACGATGGACAAGTCCCTGGCTGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: HGSAYPAAHFSV*YHDGQVPGCAG
Trigger: TCCTGCACAGCCAGGGACTTGTCCATCGTGATATCAAACTGAAAAATGTGCTGCTGGATAAGCAGAACCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 72 bp ACATTTTTCAGTTTGATATCACGATGGACAAGTCCCTaGCTGTGCAGGAAGCGGATTCCCTCCACCACATCT +
Preference number: 6 (lower is better)
Translates to: TFFSLISRWTSP*LCRKRIPSTTS
Trigger: AGATGTGGTGGAGGGAATCCGCTTCCTGCACAGCCAGGGACTTGTCCATCGTGATATCAAACTGAAAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CCA 72 bp TTATCCAGCAGCACATTTTTCAGTTTGATATCACGATaGACAAGTCCCTGGCTGTGCAGGAAGCGGATTCCC +
Preference number: 6 (lower is better)
Translates to: LSSSTFFSLISR*TSPWLCRKRIP
Trigger: GGGAATCCGCTTCCTGCACAGCCAGGGACTTGTCCATCGTGATATCAAACTGAAAAATGTGCTGCTGGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CAA 72 bp ATGGCCTCTGGCTTGCAGAATCCTAAGTCAGTGATCTaGGCACGGTTCTGCTTATCCAGCAGCACATTTTTC +
Preference number: 6 (lower is better)
Translates to: MASGLQNPKSVI*ARFCLSSSTFF
Trigger: GAAAAATGTGCTGCTGGATAAGCAGAACCGTGCCAAGATCACTGACTTAGGATTCTGCAAGCCAGAGGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CAA 90 bp CCTGACATCATGGCCTCTGGCTTGCAGAATCCTAAGTCAGTGATCTaGGCACGGTTCTGCTTATCCAGCAGCACATTTTTCAGTTTGATA +
Preference number: 6 (lower is better)
Translates to: PDIMASGLQNPKSVI*ARFCLSSSTFFSLI
Trigger: TATCAAACTGAAAAATGTGCTGCTGGATAAGCAGAACCGTGCCAAGATCACTGACTTAGGATTCTGCAAGCCAGAGGCCATGATGTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 72 bp TATTCCAGACGTTTGGGAGTGATCTGCAGGTCCCGCTaGATGTCAAATGCCTGGTTAATAAAGATGTCAAGG +
Preference number: 6 (lower is better)
Translates to: YSRRLGVICRSR*MSNAWLIKMSR
Trigger: CCTTGACATCTTTATTAACCAGGCATTTGACATGCAGCGGGACCTGCAGATCACTCCCAAACGTCTGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 72 bp TGCTTTCAAGTAGAATCATCTAGTCCTCTGTTTGGCTaGTCAGAATTGGACTTGCAGAGCCGATTCATGATG +
Preference number: 6 (lower is better)
Translates to: CFQVESSSPLFG*SELDLQSRFMM
Trigger: CATCATGAATCGGCTCTGCAAGTCCAATTCTGAGCAGCCAAACAGAGGACTAGATGATTCTACTTGAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS CAA 72 bp AGGAAAGGAGAAATACTTTCGGATTTCCTGAAGCTCTaGCTCATCCCTCTCAGAGAGTTCATCTTTGTGGAG +
Preference number: 6 (lower is better)
Translates to: RKGEILSDFLKL*LIPLREFIFVE
Trigger: CTCCACAAAGATGAACTCTCTGAGAGGGATGAGCAAGAGCTTCAGGAAATCCGAAAGTATTTCTCCTTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 72 bp TTGCTCATCCCTCTCAGAGAGTTCATCTTTGTGGAGTaGATAGGTTATCACAGGCAAGAAATCATTCACCAA +
Preference number: 6 (lower is better)
Translates to: LLIPLREFIFVE*IGYHRQEIIHQ
Trigger: TTGGTGAATGATTTCTTGCCTGTGATAACCTATGCACTCCACAAAGATGAACTCTCTGAGAGGGATGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8
CDS GCA 72 bp TTAAGTGTCTCAACAATCATATCCTTCATTTCCTCCTaGTTTCGGTTGGCAATATTCATCAATGATTCATAC +
Preference number: 6 (lower is better)
Translates to: LSVSTIISFISS*FRLAIFINDSY
Trigger: GTATGAATCATTGATGAATATTGCCAACCGAAAGCAGGAGGAAATGAAGGATATGATTGTTGAGACACTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367161.7
ENST00000367162.8