RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DSP (Homo sapiens)

Ensembl gene IDs: ENSG00000096696

Ensembl transcript IDs: ENST00000379802.8, ENST00000418664.2, ENST00000506617.1, ENST00000682228.1, ENST00000683563.1, ENST00000683682.1, ENST00000684395.1

Found 854 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAGAAGAAACAAATCCTAAGTTCGATTTGTGCTATTGTTACAACTaGTTAGCACTTCAGACGCACTGCATCCAAGTGTACTGCTTATTT +
Preference number: 1 (lower is better)
Translates to: REETNPKFDLCYCYN*LALQTHCIQVYCLF
Trigger: AAATAAGCAGTACACTTGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAACTTAGGATTTGTTTCTTCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
3UTR-3UTR GCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGGCACTTCAGACGCACTaGATCCAAGTGTACTGCTTA +
Preference number: 2 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEALQTH*IQVYCL
Trigger: TAAGCAGTACACTTGGATGCAGTGCGTCTGAAGTGC...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
3UTR-3UTR TCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCTGCTATTGTTACAACTaGTTAGCACTTCAGACGCAC +
Preference number: 2 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFCYCYN*LALQTH
Trigger: GTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCA...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
3UTR-3UTR GCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTGTCCTATCACTCTACTaGAAGCACCGGGATTTTCTT +
Preference number: 2 (lower is better)
Translates to: YGLYNPHSETKGDSFQNAVLSLY*KHRDFL
Trigger: AAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
3UTR-3UTR GCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAGTCCTATCACTCTACTaGAAGCACCGGGATTTTCTT +
Preference number: 2 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLVLSLY*KHRDFL
Trigger: AAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
3UTR TCA 72 bp ACAAATCCTAAGTTCGATTTGTGCTATTGTTACAACTaGTTAGCACTTCAGACGCACTGCATCCAAGTGTAC +
Preference number: 3 (lower is better)
Translates to: TNPKFDLCYCYN*LALQTHCIQVY
Trigger: GTACACTTGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAACTTAGGATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
3UTR-3UTR CAA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTGTTCGATTTGTGCTATaGTTACAACTGATTAGCACT +
Preference number: 3 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGVRFVL*LQLIST
Trigger: AGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCATGCCCCCGCCGCCGCTaGTCACCTCGTAGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPCPRRR*SPRSAG
Trigger: ACCTGCGCTACGAGGTGACCAGCGGCGGCGGGGGCA...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTGGAACCGGGCGGGAGTaGGGAAGGCTCGCGAGGTCG +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSGTGRE*GRLARS
Trigger: CGACCTCGCGAGCCTTCCGCACTCCCGCCCGGTTCC...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTCGCTGCTCGCTACCTaGGCCCTCCCGAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSSLLAT*ALPRPL
Trigger: CAGCGGCCTCGGGAGGGCCCAGGTAGCGAGCAGCGA...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGAGCCTCCACCACCCTTaGAGCTGGCCCTGCGGACTC +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGSLHHP*SWPCGL
Trigger: GAGTCCGCAGGGCCAGCTCCAAGGGTGGTGGAGGCT...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGTGCGGCCCAGAGTGTTaGTCCGCGGGTGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPCGPEC*SAGGSL
Trigger: GAGGCTCCCACCCGCGGATCAACACTCTGGGCCGCA...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGCGGCGCGGCCATCTATaGACCCCTTCCGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGRRGHL*TPSGWL
Trigger: AAGCCATCCGGAAGGGGTTCATAGATGGCCGCGCCG...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAGGCTCGCGAGGTCGCTaGTCGCTACCTGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLGSRGR*SLPGPS
Trigger: GGAGGGCCCAGGTAGCGAGCAGCGACCTCGCGAGCC...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTGCCCCCGCCGCCGCTaGTCACCTCGTAGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGCPRRR*SPRSAG
Trigger: ACCTGCGCTACGAGGTGACCAGCGGCGGCGGGGGCA...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAGTCGGAGCTGGGTGTTaGTGTTGGTCGGCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPVGAGC*CWSAAE
Trigger: CTCCGCCGCCGACCAACACCAACACCCAGCTCCGAC...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418664.2
CDS-3UTR GCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGGGAACCGGGCGGGAGTaGGGAAGGCTCGCGAGGTCG +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEGTGRE*GRLARS
Trigger: CGACCTCGCGAGCCTTCCGCACTCCCGCCCGGTTCC...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTACTCTCCGGGACCCACTaGGGGACCCGGAGCGAGATC +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLLSGTH*GTRSEI
Trigger: GATCTCGCTCCGGGTCCCGCAGTGGGTCCCGGAGAG...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAGCGGGAGGAAAGCTGTaGCTCGGAGGGCGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLAGGKL*LGGRQG
Trigger: CCCTTGCCGCCCTCCGAGCCACAGCTTTCCTCCCGC...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTATCGCTGCTCGCTACCTaGGCCCTCCCGAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLSLLAT*ALPRPL
Trigger: CAGCGGCCTCGGGAGGGCCCAGGTAGCGAGCAGCGA...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAAATAGTACATCCTGCTaGTGCCCCCGCCGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPNSTSC*CPRRRW
Trigger: CCAGCGGCGGCGGGGGCACCAGCAGGATGTACTATT...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGAACTCCAGGAAGCGCTaGCCAGCCTCATACGGGAGC +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGNSRKR*PASYGS
Trigger: GCTCCCGTATGAGGCTGGCCAGCGCTTCCTGGAGTT...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAGGCTGGGTAAGCCCTTaGACGACACGGAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPGWVSP*TTRRRL
Trigger: AAGCCGCCTCCGTGTCGTCCAAGGGCTTACCCAGCC...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCTGCGGCCCAGAGTGTTaGTCCGCGGGTGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTCGPEC*SAGGSL
Trigger: GAGGCTCCCACCCGCGGATCAACACTCTGGGCCGCA...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGCCGTGGTTGGGTGGATaGTGCCACCTGTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPPWLGG*CHLCRP
Trigger: AGGCCTGCACAGGTGGCATCATCCACCCAACCACGG...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGGGCTCGCGAGGTCGCTaGTCGCTACCTGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKGSRGR*SLPGPS
Trigger: GGAGGGCCCAGGTAGCGAGCAGCGACCTCGCGAGCC...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGCAGTCGGAGCAGTTCTaGAGCAGCTCCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGQSEQF*SSSWMV
Trigger: CACCATCCAGGAGCTGCTGCAGAACTGCTCCGACTG...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGCCTCCTCCAGGGACTaGTTGTGCCGGGCATTGTCC +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPASSRD*LCRALS
Trigger: GGACAATGCCCGGCACAAGCAGTCCCTGGAGGAGGC...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAAGCACGTCCCTCTGCTaGCGGAGGTCATCCTCACTC +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPSTSLC*RRSSSL
Trigger: GAGTGAGGATGACCTCCGGCAGCAGAGGGACGTGCT...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGGTCTTGCAGCCTCTGTaGGGCGCGGCCATCTATGAA +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGVLQPL*GAAIYE
Trigger: TTCATAGATGGCCGCGCCGCACAGAGGCTGCAAGAC...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGCGGGAGGAAAGCTGTaGCTCGGAGGGCGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLAGGKL*LGGRQG
Trigger: CCCTTGCCGCCCTCCGAGCCACAGCTTTCCTCCCGC...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGTGTTGATCCGCGGGTaGGAGCCTCCGTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPVLIRG*EPPLQL
Trigger: GAGCTGCAACGGAGGCTCCCACCCGCGGATCAACAC...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGAATAGTACATCCTGCTaGTGCCCCCGCCGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPNSTSC*CPRRRW
Trigger: CCAGCGGCGGCGGGGGCACCAGCAGGATGTACTATT...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGCACCACCCTTGGAGCTaGCCCTGCGGACTCGAGGGA +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLHHPWS*PCGLEG
Trigger: TCCCTCGAGTCCGCAGGGCCAGCTCCAAGGGTGGTG...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGGTCTGGGTCTCTCGATaGGACCCATATGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGVWVSR*DPYGRC
Trigger: ACAGCGCCCATATGGGTCCCATCGAGAGACCCAGAC...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCGCTGGGTGTTGGTGTTaGTCGGCGGCGGAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFAGCWC*SAAERV
Trigger: GACTCGCTCCGCCGCCGACCAACACCAACACCCAGC...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418664.2
CDS-3UTR TCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGATTCAGGCTGCACGATaGGCTCTGCTCGCATCAAGC +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGIQAAR*ALLASS
Trigger: GCTTGATGCGAGCAGAGCTCATCGTGCAGCCTGAAT...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGAGCTGCTGTTTCCTCTaGGACACCTCAGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGSCCFL*DTSEPV
Trigger: CACTGGCTCTGAGGTGTCTCAGAGGAAACAGCAGCT...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR TCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTCGGCGCGGCCATCTATaGACCCCTTCCGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGRRGHL*TPSGWL
Trigger: AAGCCATCCGGAAGGGGTTCATAGATGGCCGCGCCG...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGAGTACATCCTGCTGGTaGCCCCGCCGCCGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKESTSCW*PRRRWS
Trigger: TGACCAGCGGCGGCGGGGGCACCAGCAGGATGTACT...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACAGGGCTGGCCCATCTaGCGCATCTCTCTGATCAAG +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPQGWPI*RISLIK
Trigger: CTTGATCAGAGAGATGCGGCAGATGGGCCAGCCCTG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACAGCCTCTGCAGCCTTaGCTTGTCTTGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPQPLQP*LVLLQD
Trigger: GTCCTGGAGCAAGACAAGGCAAGGCTGCAGAGGCTG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCACCACCCTTGGAGCTaGCCCTGCGGACTCGAGGGA +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLHHPWS*PCGLEG
Trigger: TCCCTCGAGTCCGCAGGGCCAGCTCCAAGGGTGGTG...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGAGCCTCCACCACCCTTaGAGCTGGCCCTGCGGACTC +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKESLHHP*SWPCGL
Trigger: GAGTCCGCAGGGCCAGCTCCAAGGGTGGTGGAGGCT...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAAGCGATAGTCGCCGATaGAGTTGTGGATGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPSDSRR*SCGCPG
Trigger: ACCGGGGCATCCACAACTCCATCGGCGACTATCGCT...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAGGCTGGGTAAGCCCTTaGACGACACGGAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLGWVSP*TTRRRL
Trigger: AAGCCGCCTCCGTGTCGTCCAAGGGCTTACCCAGCC...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCCGAGTTCTGGTCGGTaGTCACGCCGCGCCGAGAAT +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLPSSGR*SRRAEN
Trigger: ATTCTCGGCGCGGCGTGATCACCGACCAGAACTCGG...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCGCGCAGGTCGGCTTTaGTTTTGTCCAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFRAGRL*FCPAAS
Trigger: GCTGGCAGCTGGACAAAATCAAAGCCGACCTGCGCG...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTACTTGCAGGAGTCTTCTaGCGCGGTCCTCTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLLAGVF*RGPLQP
Trigger: CGGCTGAAGAGGACCGCGTCAGAAGACTCCTGCAAG...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR TCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGTGGGAGACTGCGTCCTaGAGTGACAGCTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLWETAS*SDSFWP
Trigger: GGGCCAGAAGCTGTCACTTCAGGACGCAGTCTCCCA...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACCTATGAAGGCTTTCTaGGCAGGCTTCAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPPMKAF*AGFSLV
Trigger: CACCAGGCTGAAGCCTGCTCAGAAAGCCTTCATAGG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACAACAAGACCTCCCGTaGGGTACTGGAACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPQQDLP*GTGTPG
Trigger: TCCTGGAGTTCCAGTACCTCACGGGAGGTCTTGTTG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGGGTGGGAGCCTCCGTTaGAGCTCATGTCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKGGSLR*SSCRRA
Trigger: TGCCCGCCGACATGAGCTGCAACGGAGGCTCCCACC...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGAGTACATCCTGCTGGTaGCCCCGCCGCCGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKSTSCW*PRRRWS
Trigger: TGACCAGCGGCGGCGGGGGCACCAGCAGGATGTACT...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGGAGAATAGTACATCCTaGTGGTGCCCCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEENSTS*WCPRRR
Trigger: GCGGCGGCGGGGGCACCAGCAGGATGTACTATTCTC...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCGAGAATAGTACATCCTaGTGGTGCCCCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTENSTS*WCPRRR
Trigger: GCGGCGGCGGGGGCACCAGCAGGATGTACTATTCTC...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCATCCATCTCCGCCCTTTaGTGCCTCATCCACCCCAAA +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPSISAL*CLIHPK
Trigger: TTTGGGGTGGATGAGGCAGCAAAGGGCGGAGATGGA...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACCGTCACGTACCACTTaGTGCGCTCGTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPPSRTT*CARCCP
Trigger: AGGACAACAACGAGCGCAGCAAGTGGTACGTGACGG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGCGGTTGTTGCTGATCTaGAGCTGGCTCCTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGRLLLI*SWLLSS
Trigger: GGAACTAAGGAGCCAGCTGCAGATCAGCAACAACCG...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGAGGTCCACGGCCAGTaGGTTCGGAGGAGGGATGAT +
Preference number: 4 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWEVHGQ*VRRRDD
Trigger: ATCATCCCTCCTCCGAACCCACTGGCCGTGGACCTC...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCTACCAGGACCACCCTaGTGGAGCCATCTGATCCCG +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFLPGPP*WSHLIP
Trigger: CGGGATCAGATGGCTCCACCAGGGTGGTCCTGGTAG...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGTGCCCATGCTGCTGCTaGTGCCGACACCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGCPCCC*CRHHFS
Trigger: TGAAAAATGGTGTCGGCACCAGCAGCAGCATGGGCA...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAGAGCTGCGTCGGAGCTaGGTGTTGGTGTTGGTCGGC +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLELRRS*VLVLVG
Trigger: GCCGACCAACACCAACACCCAGCTCCGACGCAGCTC...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418664.2
CDS-3UTR TCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCACCGAGTTCTGGTCGGTaGTCACGCCGCGCCGAGAAT +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAPSSGR*SRRAEN
Trigger: ATTCTCGGCGCGGCGTGATCACCGACCAGAACTCGG...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTACGCGCAGGTCGGCTTTaGTTTTGTCCAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLRAGRL*FCPAAS
Trigger: GCTGGCAGCTGGACAAAATCAAAGCCGACCTGCGCG...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCAGGGGTACTTCTTCCTaGTGGAGTCCTGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFRGTSS*WSPGAP
Trigger: AGGGGCTCCAGGACTCCATCAGGAAGAAGTACCCCT...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGGCTTCTGGGCATCGGTaGACTGAGACTGTATTTTCC +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGASGHR*TETVFS
Trigger: GGAAAATACAGTCTCAGTTCACCGATGCCCAGAAGC...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGCAGTTTCCTCCTCAGTaGGCCTGGCTTCATAAACCT +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGQFPPQ*AWLHKP
Trigger: AGGTTTATGAAGCCAGGCTCACTGAGGAGGAAACTG...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGCGCTTGGCCTCCTCCTaGAACTCAGCTTTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPRLASS*NSALSL
Trigger: GAGACTCAAAGCTGAGTTTCAGGAGGAGGCCAAGCG...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR TCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCGGGTCCGGTTGTTGCTaGTCTGCAGCTGGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFGSGCC*SAAGSL
Trigger: TAAGGAGCCAGCTGCAGATCAGCAACAACCGGACCC...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR TCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGTCATCGAAGTCAATaGGGTCCCGAGCTATGGCAC +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPGHRSQ*GPELWH
Trigger: GTGCCATAGCTCGGGACCTCATTGACTTCGATGACC...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACGGTCACAGGTTGTCTaGTTCCTTGGAAGGACATGC +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPRSQVV*FLGRTC
Trigger: GCATGTCCTTCCAAGGAATCAGACAACCTGTGACCG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGGAAGCCTCTGACCCGTaGTGCTGTCAACGATGCCCC +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEEASDP*CCQRCP
Trigger: GGGGCATCGTTGACAGCATCACGGGTCAGAGGCTTC...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGGCCTCCAGAAGCCTCTaGCCCGTGATGCTGTCAACG +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEASRSL*PVMLST
Trigger: CGTTGACAGCATCACGGGTCAGAGGCTTCTGGAGGC...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAGCCTCCAGAAGCCTCTaGCCCGTGATGCTGTCAACG +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLASRSL*PVMLST
Trigger: CGTTGACAGCATCACGGGTCAGAGGCTTCTGGAGGC...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGCCGTGGTTGGGTGGATaGTGCCACCTGTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKPWLGG*CHLCRP
Trigger: AGGCCTGCACAGGTGGCATCATCCACCCAACCACGG...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCGACTGCGTCCTGAAGTaGCAGCTTCTGGCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTDCVLK*QLLARG
Trigger: ACCACGGGCCAGAAGCTGTCACTTCAGGACGCAGTC...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGGAGACTGCGTCCTaGAGTGACAGCTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNAWETAS*SDSFWP
Trigger: GGGCCAGAAGCTGTCACTTCAGGACGCAGTCTCCCA...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTCAGGGCTGGCCCATCTaGCGCATCTCTCTGATCAAG +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGQGWPI*RISLIK
Trigger: CTTGATCAGAGAGATGCGGCAGATGGGCCAGCCCTG...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTACGGTGGCTGTTAATGTaGTGCTCCACTGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLRWLLM*CSTEAR
Trigger: CCTGGCCTCAGTGGAGCAGCACATTAACAGCCACCG...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGCTTCCAGTTGACTCATaGGTATGGAGAAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGLPVDS*VWRRPP
Trigger: AGGAGGCCTTCTCCATACGCATGAGTCAACTGGAAG...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTGAGCCCCTTCAGGTATaGTTCAGTAGACTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSEPLQV*FSRLRL
Trigger: GAGGCGCAGTCTACTGAAGCATACCTGAAGGGGCTC...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGTGTTCCAGCAGGTGCTaGAGGGGCATGTTCTTGTCG +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPCSSRC*RGMFLS
Trigger: CGACAAGAACATGCCCCTGCAGCACCTGCTGGAACA...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAATCTGTTCCAGCAGGTaGTGCAGGGGCATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPICSSR*CRGMFL
Trigger: CAAGAACATGCCCCTGCAGCACCTGCTGGAACAGAT...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGATCCTGCCCTCGCAGTaGTCTATCTGCCTGCGAATC +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPILPSQ*SICLRI
Trigger: GATTCGCAGGCAGATAGAGCACTGCGAGGGCAGGAT...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACGGGTGCCTTCTTCCTaGAGTAGAACCCTCAACCTT +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPRVPSS*SRTLNL
Trigger: AAGGTTGAGGGTTCTACTGCAGGAAGAAGGCACCCG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTCAGCTCGCCTTCGCTaGTCAGTGGCCTGCAAGATG +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGSARLR*SVACKM
Trigger: CATCTTGCAGGCCACTGAGCAGCGAAGGCGAGCTGA...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATCCAGGGACTGCTTGTaGCGGGCATTGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLSRDCL*RALSSE
Trigger: CTCTGAGGACAATGCCCGGCACAAGCAGTCCCTGGA...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCTGTTCCTGGAGTAACTaGCGCCTCAGGGCCTCGACC +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTCSWSN*RLRAST
Trigger: GGTCGAGGCCCTGAGGCGGCAGTTACTCCAGGAACA...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCATCATTAATCAGCCCCTaGAGTTCCAGGGTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPSLISP*SSRVRL
Trigger: CAACCGGACCCTGGAACTGCAGGGGCTGATTAATGA...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTCAGCCTCTGCAGCCTTaGCTTGTCTTGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGQPLQP*LVLLQD
Trigger: GTCCTGGAGCAAGACAAGGCAAGGCTGCAGAGGCTG...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGCTTAGGAGAAGCAGATaGTCCAGCGATAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGLRRSR*SSDRSC
Trigger: GCAGGATCTATCGCTGGAGCATCTGCTTCTCCTAAG...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTCACTGCCCATGCTGCTaGTGGTGCCGACACCATTTT +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSHCPCC*WCRHHF
Trigger: AAAATGGTGTCGGCACCAGCAGCAGCATGGGCAGTG...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTCACCACTGCCCATGCTaGTGCTGGTGCCGACACCAT +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNAHHCPC*CWCRHH
Trigger: ATGGTGTCGGCACCAGCAGCAGCATGGGCAGTGGTG...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGGGATGGCTTCTTCGGTaGTTATCCTCCCATGCACTT +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGGWLLR*LSSHAL
Trigger: AAGTGCATGGGAGGATAAGCACCGAAGAAGCCATCC...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTCTGGTTCTGGTGCCTaGACATCGTGCCGGTTTGAC +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSSGSGA*TSCRFD
Trigger: GTCAAACCGGCACGATGTCCAGGCACCAGAACCAGA...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTATGGTGTTCTGGTTCTaGTGCCTGGACATCGTGCCG +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSMVFWF*CLDIVP
Trigger: CGGCACGATGTCCAGGCACCAGAACCAGAACACCAT...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCATTCTGCAGCAGCTCCTaGATGGTGTTCTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPFCSSS*MVFWFW
Trigger: CCAGAACCAGAACACCATCCAGGAGCTGCTGCAGAA...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTGTGGATGCCCCGGTaGCTGTTAATGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSLWMPR*LLMCCS
Trigger: GGAGCAGCACATTAACAGCCACCGGGGCATCCACAA...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGGTTTGGAGAATAGCCTaGAGCAGTGCCCTTACTGTG +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGVWRIA*SSALTV
Trigger: CACAGTAAGGGCACTGCTCCAGGCTATTCTCCAAAC...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTGCCTTCGCTGCTCAGTaGCCTGCAAGATGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSAFAAQ*PARCCH
Trigger: ATGACAGCATCTTGCAGGCCACTGAGCAGCGAAGGC...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGAGCCCGGTAGCCACTaGTATCCTCTTCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPEPGSH*YPLPSA
Trigger: TGCAGAAGGAAGAGGATACCAGTGGCTACCGGGCTC...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGTGCTTTTCCCTCAGGTaGCCATCCAGCACGTCCCTC +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLCFSLR*PSSTSL
Trigger: GAGGGACGTGCTGGATGGCCACCTGAGGGAAAAGCA...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTACTACCAGGACCACCCTaGTGGAGCCATCTGATCCCG +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLLPGPP*WSHLIP
Trigger: CGGGATCAGATGGCTCCACCAGGGTGGTCCTGGTAG...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTGGCCCGTGGTTGGGTaGATGATGCCACCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLWPVVG*MMPPVQ
Trigger: CTGCACAGGTGGCATCATCCACCCAACCACGGGCCA...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTATGGCCCGTGGTTGGGTaGATGATGCCACCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLWPVVG*MMPPVQ
Trigger: CTGCACAGGTGGCATCATCCACCCAACCACGGGCCA...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGCTGGTGGCCATGTCTTaGTCAATCACACCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPLVAMS*SITPWE
Trigger: CTCCCAGGGTGTGATTGACCAAGACATGGCCACCAG...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGAGCAGGCTTCAGCCTaGTGGCCATGTCTTGGTCAA +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPEQASA*WPCLGQ
Trigger: TTGACCAAGACATGGCCACCAGGCTGAAGCCTGCTC...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGAACTCCAGGAAGCGCTaGCCAGCCTCATACGGGAGC +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKENSRKR*PASYGS
Trigger: GCTCCCGTATGAGGCTGGCCAGCGCTTCCTGGAGTT...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGACATGTTGTAAGGGCTaGGTAAGCCCTTGGACGACA +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGTCCKG*VSPWTT
Trigger: TGTCGTCCAAGGGCTTACCCAGCCCTTACAACATGT...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCTCCCTGGACGTGGCCTaGATGATGTTCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFSLDVA*MMFCSC
Trigger: ACAGCTGCAGAACATCATTCAGGCCACGTCCAGGGA...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGTCCCTGGACGTGGCCTaGATGATGTTCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWSLDVA*MMFCSC
Trigger: ACAGCTGCAGAACATCATTCAGGCCACGTCCAGGGA...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAAAGGCCTCCTGTTTCTaGGCGATGTTGGTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPKASCF*AMLVFL
Trigger: CAAGAACACCAACATCGCTCAGAAACAGGAGGCCTT...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCAGGGGTACTTCTTCCTaGTGGAGTCCTGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTRGTSS*WSPGAP
Trigger: AGGGGCTCCAGGACTCCATCAGGAAGAAGTACCCCT...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAGCCAGGGAGCTGAATaGCCAGGGTCTGGTAATGCT +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLSQGAE*PGSGNA
Trigger: AGCATTACCAGACCCTGGTCATTCAGCTCCCTGGCT...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTCATCTCGGGCCAGTCTaGGCTCCTCTTCCAAAACTT +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSHLGPV*APLPKL
Trigger: AAGTTTTGGAAGAGGAGCTCAGACTGGCCCGAGATG...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGCTTCCTTCTGCATGGTaGGCTGGTGGATGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLLPSAW*AGGWWS
Trigger: AGACCACCATCCACCAGCTCACCATGCAGAAGGAAG...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR TCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGGTCTACTACACCCCCTaGAGCAATCTGGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLVYYTP*SNLGFQ
Trigger: CTGGAAGCCCAGATTGCTTCAGGGGGTGTAGTAGAC...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAACAGGAGCTTCTCTTTaGACTCAATGCCCACCAGAC +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPTGASL*TQCPPD
Trigger: GTCTGGTGGGCATTGAGTTCAAAGAGAAGCTCCTGT...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTCCTGGTGGAGCCATCTaGTCCCGTGATGGTTATTTC +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSPGGAI*SRDGYF
Trigger: GAAATAACCATCACGGGATCAGATGGCTCCACCAGG...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAGACTGCGTCCTGAAGTaGCAGCTTCTGGCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTADCVLK*QLLARG
Trigger: ACCACGGGCCAGAAGCTGTCACTTCAGGACGCAGTC...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTCACCCTCGAAGCCTATaGAGGCTTTCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGHPRSL*RLSEQA
Trigger: AGCCTGCTCAGAAAGCCTTCATAGGCTTCGAGGGTG...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTACACCCTCGAAGCCTATaGAGGCTTTCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLHPRSL*RLSEQA
Trigger: AGCCTGCTCAGAAAGCCTTCATAGGCTTCGAGGGTG...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCGGTGCCTGGACATCGTaGCGGTTTGACAGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTGAWTS*RFDSSR
Trigger: ACGGCTACTGTCAAACCGGCACGATGTCCAGGCACC...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCGTGTTCTGGTTCTGGTaGCTGGACATCGTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFVFWFW*LDIVPV
Trigger: AACCGGCACGATGTCCAGGCACCAGAACCAGAACAC...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTCAGTCGGAGCAGTTCTaGAGCAGCTCCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNAQSEQF*SSSWMV
Trigger: CACCATCCAGGAGCTGCTGCAGAACTGCTCCGACTG...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGCTGCACGATGAGCTCTaGTCGCATCAAGCAGTCGGA +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLLHDEL*SHQAVG
Trigger: TCCGACTGCTTGATGCGAGCAGAGCTCATCGTGCAG...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGTGGCTGTTAATGTGCTaGTCCACTGAGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWWLLMC*STEARS
Trigger: GGACCTGGCCTCAGTGGAGCAGCACATTAACAGCCA...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTCGGTGGCTGTTAATGTaGTGCTCCACTGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNARWLLM*CSTEAR
Trigger: CCTGGCCTCAGTGGAGCAGCACATTAACAGCCACCG...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGAGAATCCAACTCCACTaGGTCTGCAGAGTGTCCATA +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGRIQLH*VCRVSI
Trigger: TATGGACACTCTGCAGACGCAGTGGAGTTGGATTCT...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCATCACGTACCACTTGCTaGGCTCGTTGTTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPSRTTC*ARCCPS
Trigger: TGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGA...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAAGTGCTCTATCTGCCTaGGAATCTTCTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPSALSA*ESSAAP
Trigger: TGGAGCTGCAGAAGATTCGCAGGCAGATAGAGCACT...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGATCCTGCCCTCGCAGTaGTCTATCTGCCTGCGAATC +
Preference number: 4 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWILPSQ*SICLRI
Trigger: GATTCGCAGGCAGATAGAGCACTGCGAGGGCAGGAT...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACTTCTTAACAATGGATaGCTGCTCCAGCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPLLNNG*LLQLLG
Trigger: ACCCAGCAGCTGGAGCAGGCATCCATTGTTAAGAAG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGTCCAGCACGTCCCTCTaGTGCCGGAGGTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKSSTSL*CRRSSS
Trigger: TGAGGATGACCTCCGGCAGCAGAGGGACGTGCTGGA...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGCCATGCTGCTGCTGGTaGCGACACCATTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPPCCCW*RHHFSR
Trigger: CCTTGAAAAATGGTGTCGGCACCAGCAGCAGCATGG...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCACACCACTGCCCATGCTaGTGCTGGTGCCGACACCAT +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAHHCPC*CWCRHH
Trigger: ATGGTGTCGGCACCAGCAGCAGCATGGGCAGTGGTG...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCGTCTTGCAGCCTCTGTaGGGCGCGGCCATCTATGAA +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTVLQPL*GAAIYE
Trigger: TTCATAGATGGCCGCGCCGCACAGAGGCTGCAAGAC...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCTTGTGGATGCCCCGGTaGCTGTTAATGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFLWMPR*LLMCCS
Trigger: GGAGCAGCACATTAACAGCCACCGGGGCATCCACAA...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCGCCGATGGAGTTGTaGATGCCCCGGTGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNASPMEL*MPRWLL
Trigger: TAACAGCCACCGGGGCATCCACAACTCCATCGGCGA...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGTCGCCGATGGAGTTGTaGATGCCCCGGTGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKESPMEL*MPRWLL
Trigger: TAACAGCCACCGGGGCATCCACAACTCCATCGGCGA...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGAGCGATAGTCGCCGATaGAGTTGTGGATGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKESDSRR*SCGCPG
Trigger: ACCGGGGCATCCACAACTCCATCGGCGACTATCGCT...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGGTTTCTGAGCGATGTTaGTGTTCTTGTCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGVSERC*CSCRSS
Trigger: ACTGGAGCGACAAGAACACCAACATCGCTCAGAAAC...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGAGCTTCGCTTTGAACTaGGAACACTCTGCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGSFALN*EHSAWY
Trigger: ATACCAGGCAGAGTGTTCCCAGTTCAAAGCGAAGCT...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGTTCTGCAGGTCATACTaGACCCTTTGTAATCTCGCG +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGFCRSY*TLCNLA
Trigger: CGCGAGATTACAAAGGGTCCAGTATGACCTGCAGAA...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCACTCACACTCAGTCTaGGTCTCTCGATGGGACCCA +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFHSHSV*VSRWDP
Trigger: TGGGTCCCATCGAGAGACCCAGACTGAGTGTGAGTG...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACATCAAACACCAGCTTaGAGGTGTCAACGGTCCACT +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPHQTPA*RCQRST
Trigger: AGTGGACCGTTGACACCTCCAAGCTGGTGTTTGATG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTCTTCTGGCCCGTGGTTaGGTGGATGATGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNALLARG*VDDATC
Trigger: ACAGGTGGCATCATCCACCCAACCACGGGCCAGAAG...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTACTGGTGGCCATGTCTTaGTCAATCACACCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLLVAMS*SITPWE
Trigger: CTCCCAGGGTGTGATTGACCAAGACATGGCCACCAG...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCATTTTGGCATAGCTGCTaGTGTCTTGCAGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPFWHSC*CLAASV
Trigger: CACAGAGGCTGCAAGACACCAGCAGCTATGCCAAAA...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTGCAGCTGTCGCAGGTaGTCCATCCTCTCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLCSCRR*SILSKD
Trigger: GTCCTTTGAGAGGATGGATCACCTGCGACAGCTGCA...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGTGGACGTGGCCTGAATaGTGTTCTGCAGCTGTCGCA +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEWTWPE*CSAAVA
Trigger: TGCGACAGCTGCAGAACATCATTCAGGCCACGTCCA...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTATGGACGTGGCCTGAATaGTGTTCTGCAGCTGTCGCA +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLWTWPE*CSAAVA
Trigger: TGCGACAGCTGCAGAACATCATTCAGGCCACGTCCA...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGCGATTGTCATGGCCCTaGTCTTCTCTATGTCAATCA +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGRLSWP*SSLCQS
Trigger: TGATTGACATAGAGAAGATCAGGGCCATGACAATCG...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTGGGCATCGGTGAACTaGGACTGTATTTTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSWASVN*DCIFRL
Trigger: CAAGCGGAAAATACAGTCTCAGTTCACCGATGCCCA...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTAGCCAGGGAGCTGAATaGCCAGGGTCTGGTAATGCT +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNASQGAE*PGSGNA
Trigger: AGCATTACCAGACCCTGGTCATTCAGCTCCCTGGCT...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGAGGTTCCATGATGAGTaGTTTCAGTTGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGRFHDE*FQLWSL
Trigger: CAGTGACCACAACTGAAATCACTCATCATGGAACCT...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTACTAGAGGGAGGTTTTTaGGAGTCATCCTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLLEGGF*ESSCPR
Trigger: GCGAGGGCAGGATGACTCTCAAAAACCTCCCTCTAG...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTCTAGAGGGAGGTTTTTaGGAGTCATCCTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNALEGGF*ESSCPR
Trigger: GCGAGGGCAGGATGACTCTCAAAAACCTCCCTCTAG...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAAAGTGGATACTGCTGTaGAGTCTGAGAGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPKWILL*SLRVDL
Trigger: CAGATCCACTCTCAGACTTCACAGCAGTATCCACTT...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTCGCAAGCTTCGCTTTaGACTGGGAACACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGSQASL*TGNTLP
Trigger: AGGCAGAGTGTTCCCAGTTCAAAGCGAAGCTTGCGA...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGAGTTCTGGAACCGCGTaGTATCCTGGTCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWSSGTA*YPGPSQ
Trigger: CTGTGAAGGACCAGGATATCACGCGGTTCCAGAACT...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR TCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAGCTGCATATATCTGCTaGCGGTCATCGAAGTCAATG +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPAAYIC*RSSKSM
Trigger: CATTGACTTCGATGACCGTCAGCAGATATATGCAGC...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAGCTTCTCTTCTGTACTaGAAGCAAGAGCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPASLLY*KQEQTS
Trigger: ACTGGTCTGCTCTTGCTTTCAGTACAGAAGAGAAGC...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGCAGATTCCAGTTCATTaGCAGTGGACGGTCTCAATA +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGQIPVH*QWTVSI
Trigger: TATTGAGACCGTCCACTGTCAATGAACTGGAATCTG...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGGCCTGCTATGCAGCTTaGACCCTGGAGGAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEACYAA*TLEEVL
Trigger: AAGGACTTCCTCCAGGGTTCAAGCTGCATAGCAGGC...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCGCCTGCTATGCAGCTTaGACCCTGGAGGAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTACYAA*TLEEVL
Trigger: AAGGACTTCCTCCAGGGTTCAAGCTGCATAGCAGGC...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAATCATGTCAGCAAATTaGGTGAGGCTGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLIMSAN*VRLRLP
Trigger: CGGCAGCCTCAGCCTCACTCAATTTGCTGACATGAT...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGTTCTTCCAGGGTGTCTaGAAAAGAGCTGCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGFFQGV*KRAAPY
Trigger: ATAAGGAGCAGCTCTTTTTCAGACACCCTGGAAGAA...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCCTATGAAGGCTTTCTaGGCAGGCTTCAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLPMKAF*AGFSLV
Trigger: CACCAGGCTGAAGCCTGCTCAGAAAGCCTTCATAGG...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTACAACAAGACCTCCCGTaGGGTACTGGAACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLQQDLP*GTGTPG
Trigger: TCCTGGAGTTCCAGTACCTCACGGGAGGTCTTGTTG...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTGAAGGCGCAGCCCAGTaGTATCTTCTACCATGGAGC +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNAEGAAQ*YLLPWS
Trigger: GCTCCATGGTAGAAGATATCACTGGGCTGCGCCTTC...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAGGTGCCTGGACATCGTaGCGGTTTGACAGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAGAWTS*RFDSSR
Trigger: ACGGCTACTGTCAAACCGGCACGATGTCCAGGCACC...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTACTGCACGATGAGCTCTaGTCGCATCAAGCAGTCGGA +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLLHDEL*SHQAVG
Trigger: TCCGACTGCTTGATGCGAGCAGAGCTCATCGTGCAG...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAATCTCCGCCCTTTGCTaGCTCATCCACCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLISALC*LIHPKH
Trigger: ATGTTTGGGGTGGATGAGGCAGCAAAGGGCGGAGAT...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCATCTCCGCCCTTTGCTaGCTCATCCACCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFISALC*LIHPKH
Trigger: ATGTTTGGGGTGGATGAGGCAGCAAAGGGCGGAGAT...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTATCCATCTCCGCCCTTTaGTGCCTCATCCACCCCAAA +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLSISAL*CLIHPK
Trigger: TTTGGGGTGGATGAGGCAGCAAAGGGCGGAGATGGA...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGGAGCCCCTTCAGGTATaGTTCAGTAGACTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEEPLQV*FSRLRL
Trigger: GAGGCGCAGTCTACTGAAGCATACCTGAAGGGGCTC...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGTTCCAGCAGGTGCTaGAGGGGCATGTTCTTGTCG +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNACSSRC*RGMFLS
Trigger: CGACAAGAACATGCCCCTGCAGCACCTGCTGGAACA...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCCCGTCACGTACCACTTaGTGCGCTCGTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTPSRTT*CARCCP
Trigger: AGGACAACAACGAGCGCAGCAAGTGGTACGTGACGG...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGTCTCTATGTCAATCATaGAGTAGTGCCAGGACACCA +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGSLCQS*SSARTP
Trigger: TGGTGTCCTGGCACTACTGCATGATTGACATAGAGA...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTGCCTGCGAATCTTCTaGAGCTCCATCAGCATCCAT +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSCLRIF*SSISIH
Trigger: ATGGATGCTGATGGAGCTGCAGAAGATTCGCAGGCA...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGTCGCAGTGCTCTATCTaGCTGCGAATCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLSQCSI*LRIFCS
Trigger: GCTGCAGAAGATTCGCAGGCAGATAGAGCACTGCGA...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGACATCTGCAGCCTCTTaGAGAATCACCCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLTSAAS*RITPEG
Trigger: CCCTTCTGGGGTGATTCTGCAAGAGGCTGCAGATGT...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTACGCTGCTCAGTGGCCTaGAAGATGCTGTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLRCSVA*KMLSLS
Trigger: GCTCAATGACAGCATCTTGCAGGCCACTGAGCAGCG...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCTCCTCAGAGCGCTGCTaGATGACCTGCTTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFSSERC*MTCFSS
Trigger: AGAACTGAAGCAGGTCATGCAGCAGCGCTCTGAGGA...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCCAGCTTCTTCCTCTTaGAGGAGTCTTCTGACGCGG +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLPASSS*RSLLTR
Trigger: CCGCGTCAGAAGACTCCTGCAAGAGGAAGAAGCTGG...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCTCAGCGACCTCCTCATaGCTTCCAGCTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTSATSS*LPALPP
Trigger: TGGAGGAAGAGCTGGAAGGCATGAGGAGGTCGCTGA...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGTGATTTTGATGGCTTaGTCCTTCAGCGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPVILMA*SFSDLL
Trigger: GAGGAGGTCGCTGAAGGAGCAAGCCATCAAAATCAC...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTCTTCCTGGGTCCTCTaGTTTTCCCTCAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLSSWVL*FSLRWP
Trigger: TGGCCACCTGAGGGAAAAGCAGAGGACCCAGGAAGA...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCATCCTCCAGCCTCTaGAGCCTTGCCTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNASSSSL*SLALSC
Trigger: GCAAGACAAGGCAAGGCTGCAGAGGCTGGAGGATGA...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTATCCAGCGATAGATCCTaGACCCCGAAGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLSSDRS*TPKEWL
Trigger: CAGCCATTCCTTCGGGGTGCAGGATCTATCGCTGGA...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTCCAGCGATAGATCCTaGACCCCGAAGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLSSDRS*TPKEWL
Trigger: CAGCCATTCCTTCGGGGTGCAGGATCTATCGCTGGA...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCATGTATATGCCTGCTATaGAGCTTGAACCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPCICLL*SLNPGG
Trigger: TCCTCCAGGGTTCAAGCTGCATAGCAGGCATATACA...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCCACTGCCCATGCTGCTaGTGGTGCCGACACCATTTT +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTHCPCC*WCRHHF
Trigger: AAAATGGTGTCGGCACCAGCAGCAGCATGGGCAGTG...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTGTGCTTATCCTCCCATaGACTTCCGGGTCAACAAGA +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSVLILP*TSGSTR
Trigger: TCTTGTTGACCCGGAAGTGCATGGGAGGATAAGCAC...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGTCTGGTTCTGGTGCCTaGACATCGTGCCGGTTTGAC +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKESGSGA*TSCRFD
Trigger: GTCAAACCGGCACGATGTCCAGGCACCAGAACCAGA...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTATGGTGTTCTGGTTCTaGTGCCTGGACATCGTGCCG +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNAMVFWF*CLDIVP
Trigger: CGGCACGATGTCCAGGCACCAGAACCAGAACACCAT...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTCTGCAGCAGCTCCTaGATGGTGTTCTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLFCSSS*MVFWFW
Trigger: CCAGAACCAGAACACCATCCAGGAGCTGCTGCAGAA...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTGTTTGGAGAATAGCCTaGAGCAGTGCCCTTACTGTG +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSVWRIA*SSALTV
Trigger: CACAGTAAGGGCACTGCTCCAGGCTATTCTCCAAAC...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGATTCCCAGCGGCGCTTaGCCTCCTCCTGAAACTCAG +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKIPSGA*PPPETQ
Trigger: CTGAGTTTCAGGAGGAGGCCAAGCGCCGCTGGGAAT...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATGCATGGTGAGCTGGTaGATGGTGGTCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLCMVSW*MVVLVM
Trigger: CATCACCAAGACCACCATCCACCAGCTCACCATGCA...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGACACTTTCCTGTTCCTaGAGTAACTGCCGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLTLSCS*SNCRLR
Trigger: CCTGAGGCGGCAGTTACTCCAGGAACAGGAAAGTGT...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGGGCGCTGTTTCACCCTaGTTTCTGCCTCTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLGAVSP*FLPLEL
Trigger: CAACTCTAGAGGCAGAAACCAGGGTGAAACAGCGCC...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTCGATGGGACCCATATaGGCGCTGTCTGAGTTTATC +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSSMGPI*ALSEFI
Trigger: GATAAACTCAGACAGCGCCCATATGGGTCCCATCGA...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGTCGATGGGACCCATATaGGCGCTGTCTGAGTTTATC +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPSMGPI*ALSEFI
Trigger: GATAAACTCAGACAGCGCCCATATGGGTCCCATCGA...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGGTCTGGGTCTCTCGATaGGACCCATATGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKVWVSR*DPYGRC
Trigger: ACAGCGCCCATATGGGTCCCATCGAGAGACCCAGAC...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCCACTCACACTCAGTCTaGGTCTCTCGATGGGACCCA +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTHSHSV*VSRWDP
Trigger: TGGGTCCCATCGAGAGACCCAGACTGAGTGTGAGTG...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTACAAAGATGGCTGCAATaGGGCTCGATTCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLQRWLQ*GSILPG
Trigger: CCCTGGAAGAATCGAGCCCCATTGCAGCCATCTTTG...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCACTTCTGGCCCGTGGTTaGGTGGATGATGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTALLARG*VDDATC
Trigger: ACAGGTGGCATCATCCACCCAACCACGGGCCAGAAG...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAGAGCAGGCTTCAGCCTaGTGGCCATGTCTTGGTCAA +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLEQASA*WPCLGQ
Trigger: TTGACCAAGACATGGCCACCAGGCTGAAGCCTGCTC...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGTCTGCCGCATCTCTCTaGTCAAGCTGTCGAGGATTT +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLSAASL*SSCRGF
Trigger: AAATCCTCGACAGCTTGATCAGAGAGATGCGGCAGA...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCATGCAGCTGTCGCAGGTaGTCCATCCTCTCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTACSCRR*SILSKD
Trigger: GTCCTTTGAGAGGATGGATCACCTGCGACAGCTGCA...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTATGCACTTGGTGATCTaGAGAATCCAACTCCACTGC +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSMHLVI*RIQLHC
Trigger: GCAGTGGAGTTGGATTCTTCAGATCACCAAGTGCAT...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACATCAATGCACTTGGTaGTCTGAAGAATCCAACTCC +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPHQCTW*SEESNS
Trigger: GGAGTTGGATTCTTCAGATCACCAAGTGCATTGATG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTCAGTTTCCTCCTCAGTaGGCCTGGCTTCATAAACCT +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGQFPPQ*AWLHKP
Trigger: AGGTTTATGAAGCCAGGCTCACTGAGGAGGAAACTG...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGAAGTGGATACTGCTGTaGAGTCTGAGAGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPKWILL*SLRVDL
Trigger: CAGATCCACTCTCAGACTTCACAGCAGTATCCACTT...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGACCCCAGAAGGGGACTaGATCATGGTCCTCTTGATA +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLTPEGD*IMVLLI
Trigger: TATCAAGAGGACCATGATTCAGTCCCCTTCTGGGGT...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTACATCTCGGGCCAGTCTaGGCTCCTCTTCCAAAACTT +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLHLGPV*APLPKL
Trigger: AAGTTTTGGAAGAGGAGCTCAGACTGGCCCGAGATG...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCTCGCAAGCTTCGCTTTaGACTGGGAACACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTSQASL*TGNTLP
Trigger: AGGCAGAGTGTTCCCAGTTCAAAGCGAAGCTTGCGA...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTACCACAGGCCTTTTGCTaGAGGGCGTTTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLPQAFC*RAFSSA
Trigger: AGCTGAAGAAAACGCCCTTCAGCAAAAGGCCTGTGG...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR TCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGTCCTGTTTTCTCGGGTaGGATTGTCTATCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLSCFLG*DCLSEP
Trigger: GGGCTCAGATAGACAATCTCACCCGAGAAAACAGGA...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR TCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTACTGTTCGCATCTGAGTaGCTTGTCTCAGCTCAACCT +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLLFASE*LVSAQP
Trigger: AGGTTGAGCTGAGACAAGTCACTCAGATGCGAACAG...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR TCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCATTATCAATCTCCCTCTaGTATCGGGAGCGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPLSISL*YRERSV
Trigger: AACAGAACGCTCCCGATATCAGAGGGAGATTGATAA...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGGGTCATCGAAGTCAATaGGGTCCCGAGCTATGGCAC +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKGHRSQ*GPELWH
Trigger: GTGCCATAGCTCGGGACCTCATTGACTTCGATGACC...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAGTCTACTACACCCCCTaGAGCAATCTGGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAVYYTP*SNLGFQ
Trigger: CTGGAAGCCCAGATTGCTTCAGGGGGTGTAGTAGAC...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGTCCACAAAGTTTTTCTaGCTATCTCGGGGATCATTC +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGSTKFF*LSRGSF
Trigger: GAATGATCCCCGAGATAGTCAGAAAAACTTTGTGGA...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTCGGTCACAGGTTGTCTaGTTCCTTGGAAGGACATGC +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNARSQVV*FLGRTC
Trigger: GCATGTCCTTCCAAGGAATCAGACAACCTGTGACCG...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTCGTGGCCCTTTTCGATaGGTTCCTTATTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSRGPFR*VPYSWL
Trigger: AAGCCATGAATAAGGAACTCATCGAAAAGGGCCACG...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCCCTGGTGGAGCCATCTaGTCCCGTGATGGTTATTTC +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTPGGAI*SRDGYF
Trigger: GAAATAACCATCACGGGATCAGATGGCTCCACCAGG...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGCTGCCGGATCGGTACTaGTCAAAGAACTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWLPDRY*SKNFLS
Trigger: TGACAGGAAGTTCTTTGATCAGTACCGATCCGGCAG...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTATCATGTCAGCAAATTaGGTGAGGCTGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLIMSAN*VRLRLP
Trigger: CGGCAGCCTCAGCCTCACTCAATTTGCTGACATGAT...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGGAAGGCGCAGCCCAGTaGTATCTTCTACCATGGAGC +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKEGAAQ*YLLPWS
Trigger: GCTCCATGGTAGAAGATATCACTGGGCTGCGCCTTC...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGGTGTTCTGGTTCTGGTaGCTGGACATCGTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKVFWFW*LDIVPV
Trigger: AACCGGCACGATGTCCAGGCACCAGAACCAGAACAC...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTGCCTGCGAATCTTCTaGAGCTCCATCAGCATCCAT +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGCLRIF*SSISIH
Trigger: ATGGATGCTGATGGAGCTGCAGAAGATTCGCAGGCA...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTCGCAGTGCTCTATCTaGCTGCGAATCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLSQCSI*LRIFCS
Trigger: GCTGCAGAAGATTCGCAGGCAGATAGAGCACTGCGA...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTACATCTGCAGCCTCTTaGAGAATCACCCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNATSAAS*RITPEG
Trigger: CCCTTCTGGGGTGATTCTGCAAGAGGCTGCAGATGT...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTGAACTGGGAACACTCTaGCTGGTATTTCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSELGTL*LVFLQV
Trigger: AACCTGCAGAAATACCAGGCAGAGTGTTCCCAGTTC...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTGTCCTCAGAGCGCTaGTGCATGACCTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNALSSER*CMTCFS
Trigger: ACTGAAGCAGGTCATGCAGCAGCGCTCTGAGGACAA...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCGAGCCAGTGGCCTTTTaGTGTTGGATGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFEPVAF*CWMSSS
Trigger: GGAAGAAGACATCCAACAGCAAAAGGCCACTGGCTC...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGCGTCGCACTACTGTTTaGTTTCTGCAGGTCATACTG +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPRRTTV*FLQVIL
Trigger: CAGTATGACCTGCAGAAAGCAAACAGTAGTGCGACG...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGGATGCCTGCTCCAGCTaGTGGGTCAGGTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKDACSS*WVRLVI
Trigger: AATCACCAACCTGACCCAGCAGCTGGAGCAGGCATC...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTATTAACAATGGATGCCTaGTCCAGCTGCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLLTMDA*SSCWVR
Trigger: CCTGACCCAGCAGCTGGAGCAGGCATCCATTGTTAA...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCATCATCCTCCAGCCTCTaGAGCCTTGCCTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTASSSSL*SLALSC
Trigger: GCAAGACAAGGCAAGGCTGCAGAGGCTGGAGGATGA...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGTATGTGGTTCGATTCTaGACCGTTCCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPYVVRF*TVPSAA
Trigger: TGCAGCTGAAGGAACGGTGCAGAATCGAACCACATA...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTCCATGCTGCTGCTGGTaGCGACACCATTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNAPCCCW*RHHFSR
Trigger: CCTTGAAAAATGGTGTCGGCACCAGCAGCAGCATGG...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGTGTGTCAAAGATGGCTaGAATGGGGCTCGATTCTTC +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPCVKDG*NGARFF
Trigger: GAAGAATCGAGCCCCATTGCAGCCATCTTTGACACA...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAGACCAAAGAAAAGATTaGCGCTGTCATGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPDQRKD*RCHAQS
Trigger: TGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTC...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTATCCTGGATGGTGTTCTaGTTCTGGTGCCTGGACATC +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLSWMVF*FWCLDI
Trigger: GATGTCCAGGCACCAGAACCAGAACACCATCCAGGA...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGTTGACTCATGCGTATaGAGAAGGCCTCCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPVDSCV*RRPPVS
Trigger: AGAAACAGGAGGCCTTCTCCATACGCATGAGTCAAC...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGATTGCTTCTGTAGTCTaGGTTACGAGGCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPIASVV*VTRLQL
Trigger: CAGCTGAAGCCTCGTAACCCAGACTACAGAAGCAAT...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTACACCTCAGAGCCAGTaGCCTTTTGCTGTTGGATGT +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGTPQSQ*PFAVGC
Trigger: ACATCCAACAGCAAAAGGCCACTGGCTCTGAGGTGT...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGAACCGCGTGATATCCTaGTCCTTCACAGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKENRVIS*SFTVLS
Trigger: GGAGAGGACTGTGAAGGACCAGGATATCACGCGGTT...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCTGCACCCCGAAGGAATaGCTGGATTTCAGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFCTPKE*LDFRSN
Trigger: GTTGCTTCTGAAATCCAGCCATTCCTTCGGGGTGCA...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCGAGCAGACCAGTATGTaGTTCGATTCTGCACCGTTC +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFEQTSM*FDSAPF
Trigger: GAACGGTGCAGAATCGAACCACATACTGGTCTGCTC...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAAATAAGCGAATACCGTaGCCCTTTTCGATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPNKRIP*PFSMSS
Trigger: GGAACTCATCGAAAAGGGCCACGGTATTCGCTTATT...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTATGCCCATGCTGCTGCTaGTGCCGACACCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLCPCCC*CRHHFS
Trigger: TGAAAAATGGTGTCGGCACCAGCAGCAGCATGGGCA...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGCAAAGATGGCTGCAATaGGGCTCGATTCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEQRWLQ*GSILPG
Trigger: CCCTGGAAGAATCGAGCCCCATTGCAGCCATCTTTG...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCAGGCTTCAGCCTGGTaGCCATGTCTTGGTCAATCA +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLQASAW*PCLGQS
Trigger: TGATTGACCAAGACATGGCCACCAGGCTGAAGCCTG...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCACATGTTGTAAGGGCTaGGTAAGCCCTTGGACGACA +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFTCCKG*VSPWTT
Trigger: TGTCGTCCAAGGGCTTACCCAGCCCTTACAACATGT...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCTGCCGCATCTCTCTaGTCAAGCTGTCGAGGATTT +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNASAASL*SSCRGF
Trigger: AAATCCTCGACAGCTTGATCAGAGAGATGCGGCAGA...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGCCTCCTGTTTCTaGGCGATGTTGGTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLKASCF*AMLVFL
Trigger: CAAGAACACCAACATCGCTCAGAAACAGGAGGCCTT...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGTCTGAAGCTGGATGCTaGTTGAGGACAAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWSEAGC*LRTSWS
Trigger: TGACCAACTTGTCCTCAATCAGCATCCAGCTTCAGA...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTATGCACTTGGTGATCTaGAGAATCCAACTCCACTGC +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGMHLVI*RIQLHC
Trigger: GCAGTGGAGTTGGATTCTTCAGATCACCAAGTGCAT...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTACCAGGCTCTTCATGTTaGTGTAGAGCTGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLPGSSC*CRAGST
Trigger: TGTGGAACCAGCTCTACATCAACATGAAGAGCCTGG...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTGGGCATCGGTGAACTaGGACTGTATTTTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLWASVN*DCIFRL
Trigger: CAAGCGGAAAATACAGTCTCAGTTCACCGATGCCCA...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTGCTTCTGGGCATCGGTaGACTGAGACTGTATTTTCC +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNAASGHR*TETVFS
Trigger: GGAAAATACAGTCTCAGTTCACCGATGCCCAGAAGC...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTATTCACTGTGATGTGGTaGGAAGATCCCTGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLFTVMW*EDPWSA
Trigger: AGCAGACCAGGGATCTTCTCACCACATCACAGTGAA...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTTCACTGTGATGTGGTaGGAAGATCCCTGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLFTVMW*EDPWSA
Trigger: AGCAGACCAGGGATCTTCTCACCACATCACAGTGAA...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCGGTCTGTCAGCTGTGTaGCTTTTTCACCGAACTTGC +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTGLSAV*LFHRTC
Trigger: GCAAGTTCGGTGAAAAAGTCACACAGCTGACAGACC...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCACCCCAGAAGGGGACTaGATCATGGTCCTCTTGATA +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTTPEGD*IMVLLI
Trigger: TATCAAGAGGACCATGATTCAGTCCCCTTCTGGGGT...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTCAATGTACCGAGCATaGACATCTGCAGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLSMYRA*TSAASC
Trigger: GCAAGAGGCTGCAGATGTTCATGCTCGGTACATTGA...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCAATGTACCGAGCATaGACATCTGCAGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNASMYRA*TSAASC
Trigger: GCAAGAGGCTGCAGATGTTCATGCTCGGTACATTGA...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTCCTGAAACTCAGCTTTaGGTCTCTCGATCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSPETQL*VSRSPY
Trigger: ATAAGGAGATCGAGAGACTCAAAGCTGAGTTTCAGG...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR TCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCTCCTCTGTTCGCATCTaGGTGACTTGTCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTSSVRI*VTCLSS
Trigger: TGAGCTGAGACAAGTCACTCAGATGCGAACAGAGGA...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR TCA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGGTCAGTTCTTGCTCCTaGACCTTCAGTTTGTTTATT +
Preference number: 4 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGVSSCS*TFSLFI
Trigger: AATAAACAAACTGAAGGTTCAGGAGCAAGAACTGAC...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR TCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGTGGTCAGGTTCTCTGTaGGAGACTGCAGCCTCTCAA +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKWSGSL*ETAASQ
Trigger: TTGAGAGGCTGCAGTCTCTCACAGAGAACCTGACCA...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR TCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGGCTTCTCTTCTGTACTaGAAGCAAGAGCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLASLLY*KQEQTS
Trigger: ACTGGTCTGCTCTTGCTTTCAGTACAGAAGAGAAGC...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAACAGGAGCTTCTCTTTaGACTCAATGCCCACCAGAC +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLTGASL*TQCPPD
Trigger: GTCTGGTGGGCATTGAGTTCAAAGAGAAGCTCCTGT...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGGATCATTATACCCAGTaGCAGCTCGTTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLDHYTQ*QLVLQT
Trigger: TGTCTGCAGAACGAGCTGTCACTGGGTATAATGATC...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCGTGGCCCTTTTCGATaGGTTCCTTATTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFRGPFR*VPYSWL
Trigger: AAGCCATGAATAAGGAACTCATCGAAAAGGGCCACG...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTACTTCAATTCAGGCTaGACGATGAGCTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNAYFNSG*TMSSAR
Trigger: GCGAGCAGAGCTCATCGTGCAGCCTGAATTGAAGTA...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTACTTCAATTCAGGCTaGACGATGAGCTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLYFNSG*TMSSAR
Trigger: GCGAGCAGAGCTCATCGTGCAGCCTGAATTGAAGTA...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGTCACGTACCACTTGCTaGGCTCGTTGTTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKESRTTC*ARCCPS
Trigger: TGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGA...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGCACTTGTCTAGATTTTaGTTAGCCGACTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPHLSRF*LADFPS
Trigger: GGATGGGAAGTCGGCTAAGCAAAATCTAGACAAGTG...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGAGATGCTGCTTCTTCTaGATTATCTCAGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPRCCFF*IISEPQ
Trigger: CTGTGGCTCTGAGATAATGCAGAAGAAGCAGCATCT...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCGCTGCTGCATGACCTaGTTCAGTTCTATCTCCAGA +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLRCCMT*FSSISR
Trigger: TCTGGAGATAGAACTGAAGCAGGTCATGCAGCAGCG...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGAGCCTTGCCTTGTCTTaGTCCAGGACTTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPSLALS*SRTLIF
Trigger: GAAAATCAAAGTCCTGGAGCAAGACAAGGCAAGGCT...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGCCTCCAGCTTACGCCTaGACCTCTCTTCAATTCTCT +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEPPAYA*TSLQFS
Trigger: AGAGAATTGAAGAGAGGTGCAGGCGTAAGCTGGAGG...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTATAAAGCCAGTAGCTaGTTGGGCTTCCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGYKASS*LGFQQL
Trigger: GAGTTGCTGGAAGCCCAAGCAGCTACTGGCTTTATA...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATGTGTCAAAGATGGCTaGAATGGGGCTCGATTCTTC +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLCVKDG*NGARFF
Trigger: GAAGAATCGAGCCCCATTGCAGCCATCTTTGACACA...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGGGATTTTGGCATAGCTaGTGGTGTCTTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEGFWHS*WCLAAS
Trigger: AGAGGCTGCAAGACACCAGCAGCTATGCCAAAATCC...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTGGATTTTGGCATAGCTaGTGGTGTCTTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNAGFWHS*WCLAAS
Trigger: AGAGGCTGCAAGACACCAGCAGCTATGCCAAAATCC...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGTCCTATCACTCTACTaGAAGCACCGGGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPVLSLY*KHRDFL
Trigger: AAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTGCACTTCAGACGCACTaGATCCAAGTGTACTGCTTA +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGALQTH*IQVYCL
Trigger: TAAGCAGTACACTTGGATGCAGTGCGTCTGAAGTGC...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGACCAAAGAAAAGATTaGCGCTGTCATGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPDQRKD*RCHAQS
Trigger: TGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTC...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGTCCTGGATGGTGTTCTaGTTCTGGTGCCTGGACATC +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKSWMVF*FWCLDI
Trigger: GATGTCCAGGCACCAGAACCAGAACACCATCCAGGA...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTGTTGACTCATGCGTATaGAGAAGGCCTCCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGVDSCV*RRPPVS
Trigger: AGAAACAGGAGGCCTTCTCCATACGCATGAGTCAAC...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGAGCTTCGCTTTGAACTaGGAACACTCTGCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWSFALN*EHSAWY
Trigger: ATACCAGGCAGAGTGTTCCCAGTTCAAAGCGAAGCT...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGTCTTTCAGAGAGTTCTaGAACCGCGTGATATCCTGG +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLSFREF*NRVISW
Trigger: CCAGGATATCACGCGGTTCCAGAACTCTCTGAAAGA...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTCTCTTGATCTCTGCTTaGAGTCTTTCGATCTCACTC +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSLLISA*SLSISL
Trigger: GAGTGAGATCGAAAGACTCCAAGCAGAGATCAAGAG...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGCATCAAACACCAGCTTaGAGGTGTCAACGGTCCACT +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEHQTPA*RCQRST
Trigger: AGTGGACCGTTGACACCTCCAAGCTGGTGTTTGATG...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGTGCACCCCGAAGGAATaGCTGGATTTCAGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKECTPKE*LDFRSN
Trigger: GTTGCTTCTGAAATCCAGCCATTCCTTCGGGGTGCA...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTATGCAGCTTGAACCCTaGAGGAAGTCCTTAATTCTC +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSMQLEP*RKSLIL
Trigger: GAGAATTAAGGACTTCCTCCAGGGTTCAAGCTGCAT...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGAATAAGCGAATACCGTaGCCCTTTTCGATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPNKRIP*PFSMSS
Trigger: GGAACTCATCGAAAAGGGCCACGGTATTCGCTTATT...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGCAGGCTTCAGCCTGGTaGCCATGTCTTGGTCAATCA +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKQASAW*PCLGQS
Trigger: TGATTGACCAAGACATGGCCACCAGGCTGAAGCCTG...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCTTTTGGCATAGCTGCTaGTGTCTTGCAGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTFWHSC*CLAASV
Trigger: CACAGAGGCTGCAAGACACCAGCAGCTATGCCAAAA...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGGGCAGGTCAGGATTTTaGCATAGCTGCTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEGRSGF*HSCWCL
Trigger: AAGACACCAGCAGCTATGCCAAAATCCTGACCTGCC...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAGGAAGAATTCCCTGTaGCGTCAAAGCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLRKNSL*RQSFLS
Trigger: GGAGAGGAAGCTTTGACGCCACAGGGAATTCTTCCT...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTAGGAAGAATTCCCTGTaGCGTCAAAGCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNARKNSL*RQSFLS
Trigger: GGAGAGGAAGCTTTGACGCCACAGGGAATTCTTCCT...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGTCTTTAACTTCCAGTTaGCTCATGCGTATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPSLTSS*LMRMEK
Trigger: CTTCTCCATACGCATGAGTCAACTGGAAGTTAAAGA...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCTCTGAAGCTGGATGCTaGTTGAGGACAAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTSEAGC*LRTSWS
Trigger: TGACCAACTTGTCCTCAATCAGCATCCAGCTTCAGA...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGCATCAATGCACTTGGTaGTCTGAAGAATCCAACTCC +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLHQCTW*SEESNS
Trigger: GGAGTTGGATTCTTCAGATCACCAAGTGCATTGATG...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAACCAAGTTCTGCACCTaGCGCTTGTATTCAAGGATT +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLTKFCT*RLYSRI
Trigger: AATCCTTGAATACAAGCGTCAGGTGCAGAACTTGGT...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCACCAGGCTCTTCATGTTaGTGTAGAGCTGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAPGSSC*CRAGST
Trigger: TGTGGAACCAGCTCTACATCAACATGAAGAGCCTGG...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTCGATTGTCATGGCCCTaGTCTTCTCTATGTCAATCA +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGRLSWP*SSLCQS
Trigger: TGATTGACATAGAGAAGATCAGGGCCATGACAATCG...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAAGGTTCCATGATGAGTaGTTTCAGTTGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLRFHDE*FQLWSL
Trigger: CAGTGACCACAACTGAAATCACTCATCATGGAACCT...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGGGTCTGTCAGCTGTGTaGCTTTTTCACCGAACTTGC +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKGLSAV*LFHRTC
Trigger: GCAAGTTCGGTGAAAAAGTCACACAGCTGACAGACC...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGCATTCAAAAACCGCATaGCTGTGTTGGAATCTCCAA +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPHSKTA*LCWNLQ
Trigger: TTGGAGATTCCAACACAGTCATGCGGTTTTTGAATG...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCATTTTTGTACTTCCTCTaGTTTGTCTCGTTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPFLYFL*FVSFAR
Trigger: TCTGGCAAACGAGACAAATCAGAGGAAGTACAAAAA...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTCGTACTCCTTCTCCTTaGTGGCTTTCTCAGACTCTA +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNARTPSP*WLSQTL
Trigger: TAGAGTCTGAGAAAGCCATCAAGGAGAAGGAGTACG...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCGTACTCCTTCTCCTTaGTGGCTTTCTCAGACTCTA +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLRTPSP*WLSQTL
Trigger: TAGAGTCTGAGAAAGCCATCAAGGAGAAGGAGTACG...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGTTATCAATCTCCCTCTaGTATCGGGAGCGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLLSISL*YRERSV
Trigger: AACAGAACGCTCCCGATATCAGAGGGAGATTGATAA...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGCTGTGGATTCTGGGCTaGTTAATTTCTTTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPLWILG*LISFSW
Trigger: CCAAGAGAAAGAAATTAATCAGCCCAGAATCCACAG...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGGCTGCATATATCTGCTaGCGGTCATCGAAGTCAATG +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEAAYIC*RSSKSM
Trigger: CATTGACTTCGATGACCGTCAGCAGATATATGCAGC...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTGATCATTATACCCAGTaGCAGCTCGTTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNADHYTQ*QLVLQT
Trigger: TGTCTGCAGAACGAGCTGTCACTGGGTATAATGATC...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCCACTCTACGCTTCCTaGGGGTATTCTTTTGTGATG +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLPLYAS*GYSFVM
Trigger: CATCACAAAAGAATACCCTCAGGAAGCGTAGAGTGG...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCACTGCCGGATCGGTACTaGTCAAAGAACTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTALPDRY*SKNFLS
Trigger: TGACAGGAAGTTCTTTGATCAGTACCGATCCGGCAG...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTGGAAATCTTACTTACTaGTTCATGTCGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGGNLTY*FMSGAA
Trigger: AGCAGCTCCCGACATGAATCAGTAAGTAAGATTTCC...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCTTCTTCCAGGGTGTCTaGAAAAGAGCTGCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFFFQGV*KRAAPY
Trigger: ATAAGGAGCAGCTCTTTTTCAGACACCCTGGAAGAA...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGCTTCCAGTTGACTCATaGGTATGGAGAAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKLPVDS*VWRRPP
Trigger: AGGAGGCCTTCTCCATACGCATGAGTCAACTGGAAG...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTAGAATCCAACTCCACTaGGTCTGCAGAGTGTCCATA +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNARIQLH*VCRVSI
Trigger: TATGGACACTCTGCAGACGCAGTGGAGTTGGATTCT...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGTCTCTATGTCAATCATaGAGTAGTGCCAGGACACCA +
Preference number: 4 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWSLCQS*SSARTP
Trigger: TGGTGTCCTGGCACTACTGCATGATTGACATAGAGA...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGAGTGCTCTATCTGCCTaGGAATCTTCTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKSALSA*ESSAAP
Trigger: TGGAGCTGCAGAAGATTCGCAGGCAGATAGAGCACT...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACTTTTTCACCGAACTTaGCCAAGTCCAGATCATAAA +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPLFHRT*PSPDHK
Trigger: TTTATGATCTGGACTTGGGCAAGTTCGGTGAAAAAG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCTGTTTATCTATCCTTTaGCAGCGGTCTGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFCLSIL*QRSVSC
Trigger: ACAGCTGACAGACCGCTGGCAAAGGATAGATAAACA...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGAACTGGGAACACTCTaGCTGGTATTTCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLELGTL*LVFLQV
Trigger: AACCTGCAGAAATACCAGGCAGAGTGTTCCCAGTTC...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCACTTGTCTAGATTTTaGTTAGCCGACTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFHLSRF*LADFPS
Trigger: GGATGGGAAGTCGGCTAAGCAAAATCTAGACAAGTG...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGTTCTGCTTCTGCAGCTaGAGCTCTTTCAGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEFCFCS*SSFREF
Trigger: GAACTCTCTGAAAGAGCTGCAGCTGCAGAAGCAGAA...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCACCTCCAGCTTACGCCTaGACCTCTCTTCAATTCTCT +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAPPAYA*TSLQFS
Trigger: AGAGAATTGAAGAGAGGTGCAGGCGTAAGCTGGAGG...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCACTTAGGAGAAGCAGATaGTCCAGCGATAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTALRRSR*SSDRSC
Trigger: GCAGGATCTATCGCTGGAGCATCTGCTTCTCCTAAG...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCTATGTGGTTCGATTCTaGACCGTTCCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTYVVRF*TVPSAA
Trigger: TGCAGCTGAAGGAACGGTGCAGAATCGAACCACATA...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAGTGCTTATCCTCCCATaGACTTCCGGGTCAACAAGA +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAVLILP*TSGSTR
Trigger: TCTTGTTGACCCGGAAGTGCATGGGAGGATAAGCAC...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGGGATGGCTTCTTCGGTaGTTATCCTCCCATGCACTT +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKGWLLR*LSSHAL
Trigger: AAGTGCATGGGAGGATAAGCACCGAAGAAGCCATCC...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAGTCCTATCACTCTACTaGAAGCACCGGGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLVLSLY*KHRDFL
Trigger: AAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTCCACAGAGCCAAGATaGCTTCGTAGTACTGCTCAA +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLSTEPR*LRSTAQ
Trigger: TTGAGCAGTACTACGAAGCCATCTTGGCTCTGTGGA...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTAACATGTCTTCTGTTTaGAGAATAGCCTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSNMSSV*RIAWSS
Trigger: ACTGCTCCAGGCTATTCTCCAAACAGAAGACATGTT...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGGTGGCCTTTTGCTGTTaGATGTCTTCTTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKVAFCC*MSSSTL
Trigger: GAGGGTGGAAGAAGACATCCAACAGCAAAAGGCCAC...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGTCTTCTATCGCCTTCTaGAAATGCTCATTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPSSIAF*KCSFLK
Trigger: CTTGAGGAATGAGCATTTCCAGAAGGCGATAGAAGA...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTGCTGATCTGCAGCTaGCTCCTTAGTTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNALLICS*LLSSKM
Trigger: CATCTTGGAACTAAGGAGCCAGCTGCAGATCAGCAA...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTCAAGGCGACATCTTTTaGCAAAAAGACACTGTTCAC +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSQGDIF*QKDTVH
Trigger: GTGAACAGTGTCTTTTTGCCAAAAGATGTCGCCTTG...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGGAGCAGACCAGTATGTaGTTCGATTCTGCACCGTTC +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKEQTSM*FDSAPF
Trigger: GAACGGTGCAGAATCGAACCACATACTGGTCTGCTC...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGATGCAGCTTGAACCCTaGAGGAAGTCCTTAATTCTC +
Preference number: 4 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWMQLEP*RKSLIL
Trigger: GAGAATTAAGGACTTCCTCCAGGGTTCAAGCTGCAT...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACTAAGCCAATTTTCATaGCCTCATAAATGCCAAGCT +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPLSQFS*PHKCQA
Trigger: AGCTTGGCATTTATGAGGCCATGAAAATTGGCTTAG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCTCAACTGGTAAACGATaGCTCTCCTTTGGGTCAATG +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFSTGKR*LSFGSM
Trigger: CATTGACCCAAAGGAGAGCCATCGTTTACCAGTTGA...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTCTTTAACTTCCAGTTaGCTCATGCGTATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGSLTSS*LMRMEK
Trigger: CTTCTCCATACGCATGAGTCAACTGGAAGTTAAAGA...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCAAGCTGGATGCTGATTaGGGACAAGTTGGTCACTTT +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTKLDAD*GQVGHF
Trigger: AAAGTGACCAACTTGTCCTCAATCAGCATCCAGCTT...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTAAGCTGGATGCTGATTaGGGACAAGTTGGTCACTTT +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLKLDAD*GQVGHF
Trigger: AAAGTGACCAACTTGTCCTCAATCAGCATCCAGCTT...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCACCAAGTTCTGCACCTaGCGCTTGTATTCAAGGATT +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTTKFCT*RLYSRI
Trigger: AATCCTTGAATACAAGCGTCAGGTGCAGAACTTGGT...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTCTCAGCAATTGCTTGTaGATCATTCTGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGLSNCL*IILHTL
Trigger: AAGAGTGTGCAGAATGATTCACAAGCAATTGCTGAG...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTACTTTTCAGAACCTCTaGAGTTGGCAAGCATATCTT +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSTFQNL*SWQAYL
Trigger: AAGATATGCTTGCCAACTTCAGAGGTTCTGAAAAGT...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGACTTTTCAGAACCTCTaGAGTTGGCAAGCATATCTT +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPTFQNL*SWQAYL
Trigger: AAGATATGCTTGCCAACTTCAGAGGTTCTGAAAAGT...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGCATTCAAAAACCGCATaGCTGTGTTGGAATCTCCAA +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLHSKTA*LCWNLQ
Trigger: TTGGAGATTCCAACACAGTCATGCGGTTTTTGAATG...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCATCCTTATTTTTGTCCTaGATGGTCTTGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTASLFLS*MVLAAS
Trigger: GGAGGCTGCCAAGACCATTCAGGACAAAAATAAGGA...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR TCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCAAGTGAGCTTGTTTaGCACTTTCCTGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNASSELV*HFPVPG
Trigger: TCCAGGAACAGGAAAGTGTCAAACAAGCTCACTTGA...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR TCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTCTCTTCAATTCTCTTaGTCTCTGCTTGGAGTCTTT +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSSLQFS*SLLGVF
Trigger: AAAGACTCCAAGCAGAGATCAAGAGAATTGAAGAGA...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTCTGTGGATTCTGGGCTaGTTAATTTCTTTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGLWILG*LISFSW
Trigger: CCAAGAGAAAGAAATTAATCAGCCCAGAATCCACAG...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCAGATTCCAGTTCATTaGCAGTGGACGGTCTCAATA +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLQIPVH*QWTVSI
Trigger: TATTGAGACCGTCCACTGTCAATGAACTGGAATCTG...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGGAGGGTATTCTTTTGTaGTGTCTGCACCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLEGILL*CLHLFL
Trigger: AAGAAACAGGTGCAGACATCACAAAAGAATACCCTC...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTAGCCATCTGATCCCGTaGTGGTTATTTCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNASHLIP*WLFLPI
Trigger: AATGGGAAGAAATAACCATCACGGGATCAGATGGCT...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAGCCATCTGATCCCGTaGTGGTTATTTCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLSHLIP*WLFLPI
Trigger: AATGGGAAGAAATAACCATCACGGGATCAGATGGCT...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAGGAAATCTTACTTACTaGTTCATGTCGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLGNLTY*FMSGAA
Trigger: AGCAGCTCCCGACATGAATCAGTAAGTAAGATTTCC...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGTTATGGTTAAATTCCTaGCGCTGGATATGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPLWLNS*RWIWWK
Trigger: TTTCCACCATATCCAGCGTCAGGAATTTAACCATAA...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATGCTATTGTTACAACTaGTTAGCACTTCAGACGCAC +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLCYCYN*LALQTH
Trigger: GTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCA...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGCAGTGCCCTTACTGTaGATAAGCTATTTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWAVPLL*ISYLSS
Trigger: GCTACTTAAATAGCTTATGCACAGTAAGGGCACTGC...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCTGTGCAAGTTCTTCTaGTCATTCAAAAACCGCATG +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFLCKFF*SFKNRM
Trigger: CATGCGGTTTTTGAATGAGCAGAAGAACTTGCACAG...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGCTTTTCACATTGCCTTaGTTTCTGCAGTTGGTCATA +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPLFTLP*FLQLVI
Trigger: TATGACCAACTGCAGAAAGCAAGGCAATGTGAAAAG...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGTCAGACTCTAATTTCTaGCAACCAAGGTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPSDSNF*QPRFSF
Trigger: AAAGGAGAACCTTGGTTGGCAGAAATTAGAGTCTGA...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCTCTTCTAACATCAAGTaGTCCTTGGTCAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFSSNIK*SLVRFS
Trigger: AGAGAACCTGACCAAGGAGCACTTGATGTTAGAAGA...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGAGCCTTGCCTTGTCTTaGTCCAGGACTTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKESLALS*SRTLIF
Trigger: GAAAATCAAAGTCCTGGAGCAAGACAAGGCAAGGCT...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTAGTGATAGCTTTTTCTaGTGCATATATCTGCTGACG +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSSDSFF*CIYLLT
Trigger: CGTCAGCAGATATATGCAGCAGAAAAAGCTATCACT...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGTTCCTTGGAAGGACATaGTTCTCTTCTGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPFLGRT*FSSVLK
Trigger: TTTCAGTACAGAAGAGAAGCATGTCCTTCCAAGGAA...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCATGTATATGCCTGCTATaGAGCTTGAACCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTACICLL*SLNPGG
Trigger: TCCTCCAGGGTTCAAGCTGCATAGCAGGCATATACA...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGTGGTCTCATTGTATATaGCTGCTATGCAGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWWSHCI*LLCSLN
Trigger: GTTCAAGCTGCATAGCAGGCATATACAATGAGACCA...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCATATAAAGCCAGTAGCTaGTTGGGCTTCCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAYKASS*LGFQQL
Trigger: GAGTTGCTGGAAGCCCAAGCAGCTACTGGCTTTATA...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCATGTCTGAAAAAGAGCTaGTCCTTATGGTTAAATTCC +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPCLKKS*SLWLNS
Trigger: GGAATTTAACCATAAGGAGCAGCTCTTTTTCAGACA...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTAGACTCATTCCAAAATaGTTGGTTTTGGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNARLIPK*LVLGWG
Trigger: CCCCCAACCCAAAACCAAGCATTTTGGAATGAGTCT...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTATTTGGTCATTGGCCTaGGCAAAACACTCATCCAAT +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGIWSLA*AKHSSN
Trigger: ATTGGATGAGTGTTTTGCCCAGGCCAATGACCAAAT...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAGTTTCTGAGCGATGTTaGTGTTCTTGTCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAVSERC*CSCRSS
Trigger: ACTGGAGCGACAAGAACACCAACATCGCTCAGAAAC...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGTCCACAGAGCCAAGATaGCTTCGTAGTACTGCTCAA +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKSTEPR*LRSTAQ
Trigger: TTGAGCAGTACTACGAAGCCATCTTGGCTCTGTGGA...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTATTTTTGTCCTGAATaGTCTTGGCAGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLYFCPE*SWQPPP
Trigger: TGGAGGAGGCTGCCAAGACCATTCAGGACAAAAATA...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCCTCTTGATCTCTGCTTaGAGTCTTTCGATCTCACTC +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTLLISA*SLSISL
Trigger: GAGTGAGATCGAAAGACTCCAAGCAGAGATCAAGAG...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAGGCGACATCTTTTaGCAAAAAGACACTGTTCAC +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFQGDIF*QKDTVH
Trigger: GTGAACAGTGTCTTTTTGCCAAAAGATGTCGCCTTG...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCAACTGGTAAACGATaGCTCTCCTTTGGGTCAATG +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNASTGKR*LSFGSM
Trigger: CATTGACCCAAAGGAGAGCCATCGTTTACCAGTTGA...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTATTTCTGTGTCAAAGATaGCTGCAATGGGGCTCGATT +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLFLCQR*LQWGSI
Trigger: AATCGAGCCCCATTGCAGCCATCTTTGACACAGAAA...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGATCTCCAAACATCTCTaGGCCTTGGCTATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEISKHL*ALAISD
Trigger: ATCAGAAATAGCCAAGGCTCAGAGATGTTTGGAGAT...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGCTCAGCAATTGCTTGTaGATCATTCTGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKELSNCL*IILHTL
Trigger: AAGAGTGTGCAGAATGATTCACAAGCAATTGCTGAG...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTAATTCCTCAATTGCTTaGTTTGTTTCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNANSSIA*FVSPGP
Trigger: GGGACCTGGAGAAACAAATCAAGCAATTGAGGAATT...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTAATTCCTCAATTGCTTaGTTTGTTTCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLNSSIA*FVSPGP
Trigger: GGGACCTGGAGAAACAAATCAAGCAATTGAGGAATT...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTACTCATAATCCTTAATTaGATTGGCGCAAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLLIILN*IGAKFS
Trigger: GCTGAACTTTGCGCCAATTCAATTAAGGATTATGAG...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCATGCTCATTCCTCAAGTaGGCTTGTTTGACACTTTCC +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTACSFLK*ACLTLS
Trigger: GGAAAGTGTCAAACAAGCTCACTTGAGGAATGAGCA...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR TCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTCCACAAAGTTTTTCTaGCTATCTCGGGGATCATTC +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLSTKFF*LSRGSF
Trigger: GAATGATCCCCGAGATAGTCAGAAAAACTTTGTGGA...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTAGAACTACTGCTAAATaGGTAGGAATAAGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: FSVSIECPITLLQAPGFSRTTAK*VGIRVG
Trigger: TCCTACTCTTATTCCTACTCATTTAGCAGTAGTTCT...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCGCAGTGCCCTTACTGTaGATAAGCTATTTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTAVPLL*ISYLSS
Trigger: GCTACTTAAATAGCTTATGCACAGTAAGGGCACTGC...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGTGTTTATCTATCCTTTaGCAGCGGTCTGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKCLSIL*QRSVSC
Trigger: ACAGCTGACAGACCGCTGGCAAAGGATAGATAAACA...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCATCATAGAGCCACTTaGAGAAAGCCTGATAGTTAT +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFHHRAT*RKPDSY
Trigger: ATAACTATCAGGCTTTCTGCAAGTGGCTCTATGATG...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCTGTGCAAGTTCTTCTaGTCATTCAAAAACCGCATG +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLLCKFF*SFKNRM
Trigger: CATGCGGTTTTTGAATGAGCAGAAGAACTTGCACAG...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTCCAGATATTTCACTGTaGAAGTTCTTCTGCTCATTC +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGPDISL*KFFCSF
Trigger: GAATGAGCAGAAGAACTTGCACAGTGAAATATCTGG...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCCAGATATTTCACTGTaGAAGTTCTTCTGCTCATTC +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFPDISL*KFFCSF
Trigger: GAATGAGCAGAAGAACTTGCACAGTGAAATATCTGG...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTTCTCCTTTTCACATTaGCTTGCTTTCTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLFSFSH*LAFCSW
Trigger: CCAACTGCAGAAAGCAAGGCAATGTGAAAAGGAGAA...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCACTACTGTTTGCTTTCTaGAGGTCATACTGGACCCTT +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTALLFAF*RSYWTL
Trigger: AAGGGTCCAGTATGACCTGCAGAAAGCAAACAGTAG...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGTTCCTTGGAAGGACATaGTTCTCTTCTGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWFLGRT*FSSVLK
Trigger: TTTCAGTACAGAAGAGAAGCATGTCCTTCCAAGGAA...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCTGGTCTCATTGTATATaGCTGCTATGCAGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTWSHCI*LLCSLN
Trigger: GTTCAAGCTGCATAGCAGGCATATACAATGAGACCA...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTCCCATTCACATTCCTaGTCACACAGTTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLSHSHS*SHSSLK
Trigger: CTTCAAAGAACTGTGTGAGCAGGAATGTGAATGGGA...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTATCCCATTCACATTCCTaGTCACACAGTTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLSHSHS*SHSSLK
Trigger: CTTCAAAGAACTGTGTGAGCAGGAATGTGAATGGGA...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGAGACTCATTCCAAAATaGTTGGTTTTGGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKRLIPK*LVLGWG
Trigger: CCCCCAACCCAAAACCAAGCATTTTGGAATGAGTCT...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTTTCCATTTGGTCATTaGCCTGGGCAAAACACTCAT +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLFPFGH*PGQNTH
Trigger: ATGAGTGTTTTGCCCAGGCCAATGACCAAATGGAAA...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAACATGTCTTCTGTTTaGAGAATAGCCTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLNMSSV*RIAWSS
Trigger: ACTGCTCCAGGCTATTCTCCAAACAGAAGACATGTT...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGAATCTCCAAATTTCATaGATTCTAAGGAATCCTGGC +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPNLQIS*ILRNPG
Trigger: GCCAGGATTCCTTAGAATCCATGAAATTTGGAGATT...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTACAAGCTTCTGTTTTGTaGTCTCATTGTATATGCCTG +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLQASVL*SHCICL
Trigger: CAGGCATATACAATGAGACCACAAAACAGAAGCTTG...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCATCCTTATTCATGGCTTaGAACAAAGAGATGATGTTT +
Preference number: 4 (lower is better)
Translates to: VRFVLLLQLISTSDALHPSLFMA*NKEMMF
Trigger: AAACATCATCTCTTTGTTCCAAGCCATGAATAAGGA...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCATTTCTGTGTCAAAGATaGCTGCAATGGGGCTCGATT +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAFLCQR*LQWGSI
Trigger: AATCGAGCCCCATTGCAGCCATCTTTGACACAGAAA...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGCCATGGAGCGATTTATaGCATCCTTATAGGATATTT +
Preference number: 4 (lower is better)
Translates to: MAIFSVSIECPITLLQAPPWSDL*HPYRIF
Trigger: AAATATCCTATAAGGATGCCATAAATCGCTCCATGG...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAGCATTTTCTTTCAGATaGACATCAATGCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLAFSFR*TSMHLV
Trigger: CACCAAGTGCATTGATGTTCATCTGAAAGAAAATGC...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAATCTCCAAACATCTCTaGGCCTTGGCTATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAISKHL*ALAISD
Trigger: ATCAGAAATAGCCAAGGCTCAGAGATGTTTGGAGAT...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGTTACTTTATTATGGTTaGCATCTTGGCAGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWLLYYG*HLGRFH
Trigger: ATGGAACCTGCCAAGATGTCAACCATAATAAAGTAA...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTACTTTATTATGGTTaGCATCTTGGCAGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGLLYYG*HLGRFH
Trigger: ATGGAACCTGCCAAGATGTCAACCATAATAAAGTAA...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTACTCATAATCCTTAATTaGATTGGCGCAAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLLIILN*IGAKFS
Trigger: GCTGAACTTTGCGCCAATTCAATTAAGGATTATGAG...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAGAGGGTATTCTTTTGTaGTGTCTGCACCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAEGILL*CLHLFL
Trigger: AAGAAACAGGTGCAGACATCACAAAAGAATACCCTC...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCTTATGGTTAAATTCCTaGCGCTGGATATGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTLWLNS*RWIWWK
Trigger: TTTCCACCATATCCAGCGTCAGGAATTTAACCATAA...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGTGCTATTGTTACAACTaGTTAGCACTTCAGACGCAC +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKCYCYN*LALQTH
Trigger: GTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCA...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGCTTGTGAATCATTCTaGACACTCTTAAGCTCGTTA +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLACESF*TLLSSL
Trigger: TAACGAGCTTAAGAGTGTGCAGAATGATTCACAAGC...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTGCTTGTGAATCATTCTaGACACTCTTAAGCTCGTTA +
Preference number: 4 (lower is better)
Translates to: YGLYNPHSETKGDSFQNAACESF*TLLSSL
Trigger: TAACGAGCTTAAGAGTGTGCAGAATGATTCACAAGC...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTACTTTTTCACCGAACTTaGCCAAGTCCAGATCATAAA +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLLFHRT*PSPDHK
Trigger: TTTATGATCTGGACTTGGGCAAGTTCGGTGAAAAAG...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCCTTTTCACATTGCCTTaGTTTCTGCAGTTGGTCATA +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTLFTLP*FLQLVI
Trigger: TATGACCAACTGCAGAAAGCAAGGCAATGTGAAAAG...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCATTCTCCTTTTCACATTaGCTTGCTTTCTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAFSFSH*LAFCSW
Trigger: CCAACTGCAGAAAGCAAGGCAATGTGAAAAGGAGAA...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTATCAGACTCTAATTTCTaGCAACCAAGGTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLSDSNF*QPRFSF
Trigger: AAAGGAGAACCTTGGTTGGCAGAAATTAGAGTCTGA...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGGAATCATCCTCTTTTTaGATGGATATCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLESSSF*MDISLM
Trigger: CATCAAGGAGATATCCATGCAAAAAGAGGATGATTC...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGAGTTCTATCTCCAGATaGTGCTTCTTCTGCATTATC +
Preference number: 4 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKESSISR*CFFCII
Trigger: GATAATGCAGAAGAAGCAGCATCTGGAGATAGAACT...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAGCATCATCAAGAGATTaGTTATATCTTACGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLASSRD*LYLTLS
Trigger: GGAGAGCGTAAGATATAAGCAATCTCTTGATGATGC...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAGATGCCTCTAAAGCCTaGTTTTGGAATTTCTCAATT +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLDASKA*FWNFSI
Trigger: AATTGAGAAATTCCAAAAGCAGGCTTTAGAGGCATC...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR GCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTGTCTGAAAAAGAGCTaGTCCTTATGGTTAAATTCC +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGCLKKS*SLWLNS
Trigger: GGAATTTAACCATAAGGAGCAGCTCTTTTTCAGACA...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTAGATTGCCGCTGTCATaGACAGTCAAATTAATACCA +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLRLPLS*TVKLIP
Trigger: TGGTATTAATTTGACTGTGCATGACAGCGGCAATCT...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCAGATTGCCGCTGTCATaGACAGTCAAATTAATACCA +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTRLPLS*TVKLIP
Trigger: TGGTATTAATTTGACTGTGCATGACAGCGGCAATCT...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCCTATTAGATGCCTTTaGCAGCTCATTTTCATATTC +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFPIRCL*QLIFIF
Trigger: GAATATGAAAATGAGCTGGCAAAGGCATCTAATAGG...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418664.2
CDS-3UTR CCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAATTTGGTCATTGGCCTaGGCAAAACACTCATCCAAT +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAIWSLA*AKHSSN
Trigger: ATTGGATGAGTGTTTTGCCCAGGCCAATGACCAAAT...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGTTTCCATTTGGTCATTaGCCTGGGCAAAACACTCAT +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKFPFGH*PGQNTH
Trigger: ATGAGTGTTTTGCCCAGGCCAATGACCAAATGGAAA...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTAGCATATCTTTAAGCTaGTTGAGAACCTCAGCAATT +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGSISLS*LRTSAI
Trigger: AATTGCTGAGGTTCTCAACCAGCTTAAAGATATGCT...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAAGCATATCTTTAAGCTaGTTGAGAACCTCAGCAATT +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLSISLS*LRTSAI
Trigger: AATTGCTGAGGTTCTCAACCAGCTTAAAGATATGCT...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAATCTCCAAATTTCATaGATTCTAAGGAATCCTGGC +
Preference number: 4 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLNLQIS*ILRNPG
Trigger: GCCAGGATTCCTTAGAATCCATGAAATTTGGAGATT...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCTCCTTGTTTTTATCCTaGATGGTTTTGGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTSLFLS*MVLAAS
Trigger: TGATGCTGCCAAAACCATCCAGGATAAAAACAAGGA...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGAGCTTCTCATTCCGATaGGGATCAATTATACCACCT +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKSFSFR*GSIIPP
Trigger: AGGTGGTATAATTGATCCCCATCGGAATGAGAAGCT...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCTTCTCATTCCGATaGGGATCAATTATACCACCT +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTASFSFR*GSIIPP
Trigger: AGGTGGTATAATTGATCCCCATCGGAATGAGAAGCT...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCCAAGCTTCTGTTTTGTaGTCTCATTGTATATGCCTG +
Preference number: 4 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTQASVL*SHCICL
Trigger: CAGGCATATACAATGAGACCACAAAACAGAAGCTTG...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTCTTTATTGGTTTCTaGGTCAACTATGACCACTCT +
Preference number: 4 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGFFIGF*VNYDHS
Trigger: AGAGTGGTCATAGTTGACCCAGAAACCAATAAAGAA...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCCATGGAGCGATTTATaGCATCCTTATAGGATATTT +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFPWSDL*HPYRIF
Trigger: AAATATCCTATAAGGATGCCATAAATCGCTCCATGG...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCACATCGAAGAGTATATaGGTTATACAATCCACACTC +
Preference number: 4 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFTSKSI*VIQSTL
Trigger: GAGTGTGGATTGTATAACCCATATACTCTTCGATGT...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGTTTTTGTACTTCCTCTaGTTTGTCTCGTTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKFLYFL*FVSFAR
Trigger: TCTGGCAAACGAGACAAATCAGAGGAAGTACAAAAA...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGTCTCTTCAATTCTCTTaGTCTCTGCTTGGAGTCTTT +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKSLQFS*SLLGVF
Trigger: AAAGACTCCAAGCAGAGATCAAGAGAATTGAAGAGA...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGCATCATAGAGCCACTTaGAGAAAGCCTGATAGTTAT +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKHHRAT*RKPDSY
Trigger: ATAACTATCAGGCTTTCTGCAAGTGGCTCTATGATG...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGTGATAGCTTTTTCTaGTGCATATATCTGCTGACG +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTASDSFF*CIYLLT
Trigger: CGTCAGCAGATATATGCAGCAGAAAAAGCTATCACT...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAAAACAGATACTGTCTTaGCTGAAAATGGATCATCAA +
Preference number: 4 (lower is better)
Translates to: SIECPITLLQAPGFSFLLKQILS*LKMDHQ
Trigger: TTGATGATCCATTTTCAGGCAAGACAGTATCTGTTT...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTTCTTTATTGGTTTCTaGGTCAACTATGACCACTCT +
Preference number: 4 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLFFIGF*VNYDHS
Trigger: AGAGTGGTCATAGTTGACCCAGAAACCAATAAAGAA...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR TCA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGAGAACTACTGCTAAATaGGTAGGAATAAGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKRTTAK*VGIRVG
Trigger: TCCTACTCTTATTCCTACTCATTTAGCAGTAGTTCT...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCATGTTTTTATCCTGGATaGTTTTGGCAGCATCATCAA +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTACFYPG*FWQHHQ
Trigger: TTGATGATGCTGCCAAAACCATCCAGGATAAAAACA...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CCA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTATCCTTATTCATGGCTTaGAACAAAGAGATGATGTTT +
Preference number: 4 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLSLFMA*NKEMMF
Trigger: AAACATCATCTCTTTGTTCCAAGCCATGAATAAGGA...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAACATCGAAGAGTATATaGGTTATACAATCCACACTC +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTATSKSI*VIQSTL
Trigger: GAGTGTGGATTGTATAACCCATATACTCTTCGATGT...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR GCA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAAACAGATACTGTCTTaGCTGAAAATGGATCATCAA +
Preference number: 4 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAKQILS*LKMDHQ
Trigger: TTGATGATCCATTTTCAGGCAAGACAGTATCTGTTT...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 90 bp ACCGGGCGGGAGTGCGGAAGGCTCGCGAGGTCGCTGCTCGCTACCTaGGCCCTCCCGAGGCCGCTGCGAGCGCGGAGACGGCGACGGGCC +
Preference number: 5 (lower is better)
Translates to: TGRECGRLARSLLAT*ALPRPLRARRRRRA
Trigger: GGCCCGTCGCCGTCTCCGCGCTCGCAGCGGCCTCGGGAGGGCCCAGGTAGCGAGCAGCGACCTCGCGAGCCTTCCGCACTCCCGCCCGGT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 90 bp ACGGCCGGGGAACCGGGCGGGAGTGCGGAAGGCTCGCGAGGTCGCTaGTCGCTACCTGGGCCCTCCCGAGGCCGCTGCGAGCGCGGAGAC +
Preference number: 5 (lower is better)
Translates to: TAGEPGGSAEGSRGR*SLPGPSRGRCERGD
Trigger: GTCTCCGCGCTCGCAGCGGCCTCGGGAGGGCCCAGGTAGCGAGCAGCGACCTCGCGAGCCTTCCGCACTCCCGCCCGGTTCCCCGGCCGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 90 bp CGCCGCGCCGAGAATAGTACATCCTGCTGGTGCCCCCGCCGCCGCTaGTCACCTCGTAGCGCAGGTCCGGGCCAGACTCGGCGCGGATCA +
Preference number: 5 (lower is better)
Translates to: RRAENSTSCWCPRRR*SPRSAGPGQTRRGS
Trigger: TGATCCGCGCCGAGTCTGGCCCGGACCTGCGCTACGAGGTGACCAGCGGCGGCGGGGGCACCAGCAGGATGTACTATTCTCGGCGCGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 90 bp GCAGGTCCGGGCCAGACTCGGCGCGGATCATGCGGCCCAGAGTGTTaGTCCGCGGGTGGGAGCCTCCGTTGCAGCTCATGTCGGCGGGCA +
Preference number: 5 (lower is better)
Translates to: AGPGQTRRGSCGPEC*SAGGSLRCSSCRRA
Trigger: TGCCCGCCGACATGAGCTGCAACGGAGGCTCCCACCCGCGGATCAACACTCTGGGCCGCATGATCCGCGCCGAGTCTGGCCCGGACCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 90 bp CCAGACTCGGCGCGGATCATGCGGCCCAGAGTGTTGATCCGCGGGTaGGAGCCTCCGTTGCAGCTCATGTCGGCGGGCAATCGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: PDSARIMRPRVLIRG*EPPLQLMSAGNRES
Trigger: GCTCTCCCGATTGCCCGCCGACATGAGCTGCAACGGAGGCTCCCACCCGCGGATCAACACTCTGGGCCGCATGATCCGCGCCGAGTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 90 bp CGCCTCAGGGCCTCGACCTCAGAAGAGAGCCTCCTCAGCTCTTCCTaGGTCCTCTGCTTTTCCCTCAGGTGGCCATCCAGCACGTCCCTC +
Preference number: 5 (lower is better)
Translates to: RLRASTSEESLLSSS*VLCFSLRWPSSTSL
Trigger: GAGGGACGTGCTGGATGGCCACCTGAGGGAAAAGCAGAGGACCCAGGAAGAGCTGAGGAGGCTCTCTTCTGAGGTCGAGGCCCTGAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS TCA 90 bp TGGACATCGTGCCGGTTTGACAGTAGCCGTCCGAGTTCTGGTCGGTaGTCACGCCGCGCCGAGAATAGTACATCCTGCTGGTGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: WTSCRFDSSRPSSGR*SRRAENSTSCWCPR
Trigger: GCGGGGGCACCAGCAGGATGTACTATTCTCGGCGCGGCGTGATCACCGACCAGAACTCGGACGGCTACTGTCAAACCGGCACGATGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 90 bp GGCCATGTCTTGGTCAATCACACCCTGGGAGACTGCGTCCTGAAGTaGCAGCTTCTGGCCCGTGGTTGGGTGGATGATGCCACCTGTGCA +
Preference number: 5 (lower is better)
Translates to: GHVLVNHTLGDCVLK*QLLARGWVDDATCA
Trigger: TGCACAGGTGGCATCATCCACCCAACCACGGGCCAGAAGCTGTCACTTCAGGACGCAGTCTCCCAGGGTGTGATTGACCAAGACATGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 90 bp CTGGTGGCCATGTCTTGGTCAATCACACCCTGGGAGACTGCGTCCTaGAGTGACAGCTTCTGGCCCGTGGTTGGGTGGATGATGCCACCT +
Preference number: 5 (lower is better)
Translates to: LVAMSWSITPWETAS*SDSFWPVVGWMMPP
Trigger: AGGTGGCATCATCCACCCAACCACGGGCCAGAAGCTGTCACTTCAGGACGCAGTCTCCCAGGGTGTGATTGACCAAGACATGGCCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 90 bp CATAGCTGCTGGTGTCTTGCAGCCTCTGTGCGGCGCGGCCATCTATaGACCCCTTCCGGATGGCTTCTTCGGTGCTTATCCTCCCATGCA +
Preference number: 5 (lower is better)
Translates to: HSCWCLAASVRRGHL*TPSGWLLRCLSSHA
Trigger: TGCATGGGAGGATAAGCACCGAAGAAGCCATCCGGAAGGGGTTCATAGATGGCCGCGCCGCACAGAGGCTGCAAGACACCAGCAGCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 90 bp GCAGGTCAGGATTTTGGCATAGCTGCTGGTGTCTTGCAGCCTCTGTaGGGCGCGGCCATCTATGAACCCCTTCCGGATGGCTTCTTCGGT +
Preference number: 5 (lower is better)
Translates to: AGQDFGIAAGVLQPL*GAAIYEPLPDGFFG
Trigger: ACCGAAGAAGCCATCCGGAAGGGGTTCATAGATGGCCGCGCCGCACAGAGGCTGCAAGACACCAGCAGCTATGCCAAAATCCTGACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 90 bp GCCTCCTCCAGGGACTGCTTGTGCCGGGCATTGTCCTCAGAGCGCTaGTGCATGACCTGCTTCAGTTCTATCTCCAGATGCTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: ASSRDCLCRALSSER*CMTCFSSISRCCFF
Trigger: GAAGAAGCAGCATCTGGAGATAGAACTGAAGCAGGTCATGCAGCAGCGCTCTGAGGACAATGCCCGGCACAAGCAGTCCCTGGAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 90 bp GTCCTCTGCTTTTCCCTCAGGTGGCCATCCAGCACGTCCCTCTGCTaGCGGAGGTCATCCTCACTCCTCTTCTTAACAATGGATGCCTGC +
Preference number: 5 (lower is better)
Translates to: VLCFSLRWPSSTSLC*RRSSSLLFLTMDAC
Trigger: GCAGGCATCCATTGTTAAGAAGAGGAGTGAGGATGACCTCCGGCAGCAGAGGGACGTGCTGGATGGCCACCTGAGGGAAAAGCAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 90 bp TGGGTCCTCTGCTTTTCCCTCAGGTGGCCATCCAGCACGTCCCTCTaGTGCCGGAGGTCATCCTCACTCCTCTTCTTAACAATGGATGCC +
Preference number: 5 (lower is better)
Translates to: WVLCFSLRWPSSTSL*CRRSSSLLFLTMDA
Trigger: GGCATCCATTGTTAAGAAGAGGAGTGAGGATGACCTCCGGCAGCAGAGGGACGTGCTGGATGGCCACCTGAGGGAAAAGCAGAGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CCA 90 bp CGTGGGGTGAACTTACGGAGAAGGCCTCCTGTTTCTGAGCGATGTTaGTGTTCTTGTCGCTCCAGTCGTACAGCAGCTCCTCCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: RGVNLRRRPPVSERC*CSCRSSRTAAPPPR
Trigger: GCGAGGAGGAGGAGCTGCTGTACGACTGGAGCGACAAGAACACCAACATCGCTCAGAAACAGGAGGCCTTCTCCGTAAGTTCACCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506617.1
CDS TCA 90 bp AGCCTCCACCACCCTTGGAGCTGGCCCTGCGGACTCGAGGGACACTaGTGGCTTTATAAAGGGCTCGCATTTGCTCTTGGAGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SLHHPWSWPCGLEGH*WLYKGLAFALGAEE
Trigger: TTCTTCAGCTCCAAGAGCAAATGCGAGCCCTTTATAAAGCCATCAGTGTCCCTCGAGTCCGCAGGGCCAGCTCCAAGGGTGGTGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000683563.1
CDS TCA 90 bp TCTACAGCCGCGTGGGGTGAACTTACGGAGAAGGCCTCCTGTTTCTaGGCGATGTTGGTGTTCTTGTCGCTCCAGTCGTACAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: STAAWGELTEKASCF*AMLVFLSLQSYSSS
Trigger: GGAGCTGCTGTACGACTGGAGCGACAAGAACACCAACATCGCTCAGAAACAGGAGGCCTTCTCCGTAAGTTCACCCCACGCGGCTGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506617.1
CDS GCA 90 bp GAACAAGCATGTCAACGCCTCCCGGGCCCGTCACGTACCACTTGCTaGGCTCGTTGTTGTCCTTCAGGATACACTCATCCCCCTTATGCA +
Preference number: 5 (lower is better)
Translates to: EQACQRLPGPSRTTC*ARCCPSGYTHPPYA
Trigger: TGCATAAGGGGGATGAGTGTATCCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCGGGAGGCGTTGACATGCTTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 90 bp AGGGAACAAGCATGTCAACGCCTCCCGGGCCCGTCACGTACCACTTaGTGCGCTCGTTGTTGTCCTTCAGGATACACTCATCCCCCTTAT +
Preference number: 5 (lower is better)
Translates to: REQACQRLPGPSRTT*CARCCPSGYTHPPY
Trigger: ATAAGGGGGATGAGTGTATCCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCGGGAGGCGTTGACATGCTTGTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 90 bp CACACAAACACATGGGCTGACCCCATCGTGCTGGAACGTCTGGCCTaGACAGGTTTGGGCTGTTCAAGAAGCTGCTTACCCTTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: HTNTWADPIVLERLA*TGLGCSRSCLPFAA
Trigger: GGCAGCAAAGGGTAAGCAGCTTCTTGAACAGCCCAAACCTGTGCAGGCCAGACGTTCCAGCACGATGGGGTCAGCCCATGTGTTTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683563.1
CDS GCA 90 bp GAAGCGATGGGAACAGGGAAAGCTTACAGGCTGCACGATGAGCTCTaGTCGCATCAAGCAGTCGGAGCAGTTCTGCAGCAGCTCCTGGAT +
Preference number: 5 (lower is better)
Translates to: EAMGTGKAYRLHDEL*SHQAVGAVLQQLLD
Trigger: ATCCAGGAGCTGCTGCAGAACTGCTCCGACTGCTTGATGCGAGCAGAGCTCATCGTGCAGCCTGTAAGCTTTCCCTGTTCCCATCGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683682.1
CDS GCA 90 bp TCTATGAACCCCTTCCGGATGGCTTCTTCGGTGCTTATCCTCCCATaGACTTCCGGGTCAACAAGACCTCCCGTGAGGTACTGGAACTCC +
Preference number: 5 (lower is better)
Translates to: SMNPFRMASSVLILP*TSGSTRPPVRYWNS
Trigger: GGAGTTCCAGTACCTCACGGGAGGTCTTGTTGACCCGGAAGTGCATGGGAGGATAAGCACCGAAGAAGCCATCCGGAAGGGGTTCATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 90 bp GTTGACTCATGCGTATGGAGAAGGCCTCCTGTTTCTGAGCGATGTTaGTGTTCTTGTCGCTCCAGTCGTACAGCAGCTCCTCCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: VDSCVWRRPPVSERC*CSCRSSRTAAPPPR
Trigger: GCGAGGAGGAGGAGCTGCTGTACGACTGGAGCGACAAGAACACCAACATCGCTCAGAAACAGGAGGCCTTCTCCATACGCATGAGTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000682228.1
CDS TCA 90 bp CCAGGGACTGCTTGTGCCGGGCATTGTCCTCAGAGCGCTGCTGCATaGCCTGCTTCAGTTCTATCTCCAGATGCTGCTTCTTCTGCATTA +
Preference number: 5 (lower is better)
Translates to: PGTACAGHCPQSAAA*PASVLSPDAASSAL
Trigger: TAATGCAGAAGAAGCAGCATCTGGAGATAGAACTGAAGCAGGTCATGCAGCAGCGCTCTGAGGACAATGCCCGGCACAAGCAGTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS TCA 90 bp GTGTTTTATCTCCCTGATCAGGCACAGCTGCTGAGGTTCTGGGTCTaGGACGATACCTCCAGCTCCTTGATCTGTTCCAGCAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: VFYLPDQAQLLRFWV*DDTSSSLICSSRCC
Trigger: GCAGCACCTGCTGGAACAGATCAAGGAGCTGGAGGTATCGTCTCAGACCCAGAACCTCAGCAGCTGTGCCTGATCAGGGAGATAAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682228.1
CDS GCA 90 bp TGCTGCCGGAGGTCATCCTCACTCCTCTTCTTAACAATGGATGCCTaGTCCAGCTGCTGGGTCAGGTTGGTGATTTTGATGGCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: CCRRSSSLLFLTMDA*SSCWVRLVILMACS
Trigger: GGAGCAAGCCATCAAAATCACCAACCTGACCCAGCAGCTGGAGCAGGCATCCATTGTTAAGAAGAGGAGTGAGGATGACCTCCGGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 90 bp CCTCTGCTGCCGGAGGTCATCCTCACTCCTCTTCTTAACAATGGATaGCTGCTCCAGCTGCTGGGTCAGGTTGGTGATTTTGATGGCTTG +
Preference number: 5 (lower is better)
Translates to: PLLPEVILTPLLNNG*LLQLLGQVGDFDGL
Trigger: CAAGCCATCAAAATCACCAACCTGACCCAGCAGCTGGAGCAGGCATCCATTGTTAAGAAGAGGAGTGAGGATGACCTCCGGCAGCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGGGGCTGGGTAAGCCCTaGGACGACACGGAGGCGGCT +
Preference number: 5 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGGLGKP*DDTEAA
Trigger: AGCCGCCTCCGTGTCGTCCAAGGGCTTACCCAGCCC...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 90 bp CTTCAAGGCAACAGGCTCAAGACAAGCATCTACAGCCGCGTGGGGTaGACTTACGGAGAAGGCCTCCTGTTTCTGAGCGATGTTGGTGTT +
Preference number: 5 (lower is better)
Translates to: LQGNRLKTSIYSRVG*TYGEGLLFLSDVGV
Trigger: AACACCAACATCGCTCAGAAACAGGAGGCCTTCTCCGTAAGTTCACCCCACGCGGCTGTAGATGCTTGTCTTGAGCCTGTTGCCTTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506617.1
CDS GCA 90 bp TGGTCTGCTAGAGGGAGGTTTTTGAGAGTCATCCTGCCCTCGCAGTaGTCTATCTGCCTGCGAATCTTCTGCAGCTCCATCAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: WSARGRFLRVILPSQ*SICLRIFCSSISIH
Trigger: ATGGATGCTGATGGAGCTGCAGAAGATTCGCAGGCAGATAGAGCACTGCGAGGGCAGGATGACTCTCAAAAACCTCCCTCTAGCAGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS CCA 90 bp TCAAACACCAGCTTGGAGGTGTCAACGGTCCACTCACACTCAGTCTaGGTCTCTCGATGGGACCCATATGGGCGCTGTCTGAGTTTATCA +
Preference number: 5 (lower is better)
Translates to: SNTSLEVSTVHSHSV*VSRWDPYGRCLSLS
Trigger: TGATAAACTCAGACAGCGCCCATATGGGTCCCATCGAGAGACCCAGACTGAGTGTGAGTGGACCGTTGACACCTCCAAGCTGGTGTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGATGCGGCCCAGAGTGTaGATCCGCGGGTGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGMRPRV*IRGWEP
Trigger: AGGCTCCCACCCGCGGATCAACACTCTGGGCCGCAT...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 90 bp TTTTCTGGTAAGCATCACAGGGCTGGCCCATCTGCCGCATCTCTCTaGTCAAGCTGTCGAGGATTTCCATTTGGTCATTGGCCTGGGCAA +
Preference number: 5 (lower is better)
Translates to: FSGKHHRAGPSAASL*SSCRGFPFGHWPGQ
Trigger: TTGCCCAGGCCAATGACCAAATGGAAATCCTCGACAGCTTGATCAGAGAGATGCGGCAGATGGGCCAGCCCTGTGATGCTTACCAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000683563.1
CDS TCA 90 bp CATCCTCCAGCCTCTGCAGCCTTGCCTTGTCTTGCTCCAGGACTTTaGTTTTCACCAGAAGGCTCTCTCTTTCCTGTACCACCTGAGTAC +
Preference number: 5 (lower is better)
Translates to: HPPASAALPCLAPGL*FSPEGSLFPVPPEY
Trigger: GTACTCAGGTGGTACAGGAAAGAGAGAGCCTTCTGGTGAAAATCAAAGTCCTGGAGCAAGACAAGGCAAGGCTGCAGAGGCTGGAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 90 bp ATCTTCTTCTTTCCCTTCACACCCTCGAAGCCTATGAAGGCTTTCTaGGCAGGCTTCAGCCTGGTGGCCATGTCTTGGTCAATCACACCC +
Preference number: 5 (lower is better)
Translates to: IFFFPFTPSKPMKAF*AGFSLVAMSWSITP
Trigger: GGGTGTGATTGACCAAGACATGGCCACCAGGCTGAAGCCTGCTCAGAAAGCCTTCATAGGCTTCGAGGGTGTGAAGGGAAAGAAGAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 90 bp AGAGGGAGGTTTTTGAGAGTCATCCTGCCCTCGCAGTGCTCTATCTaGCTGCGAATCTTCTGCAGCTCCATCAGCATCCATGTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: RGRFLRVILPSQCSI*LRIFCSSISIHVSC
Trigger: GCAAGAAACATGGATGCTGATGGAGCTGCAGAAGATTCGCAGGCAGATAGAGCACTGCGAGGGCAGGATGACTCTCAAAAACCTCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS GCA 90 bp GACTGCTTGTGCCGGGCATTGTCCTCAGAGCGCTGCTGCATGACCTaGTTCAGTTCTATCTCCAGATGCTGCTTCTTCTGCATTATCTCA +
Preference number: 5 (lower is better)
Translates to: DCLCRALSSERCCMT*FSSISRCCFFCIIS
Trigger: TGAGATAATGCAGAAGAAGCAGCATCTGGAGATAGAACTGAAGCAGGTCATGCAGCAGCGCTCTGAGGACAATGCCCGGCACAAGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 90 bp GCACGATTCAGCTCATCCTCCAGCCTCTGCAGCCTTGCCTTGTCTTaGTCCAGGACTTTGATTTTCACCAGAAGGCTCTCTCTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: ARFSSSSSLCSLALS*SRTLIFTRRLSLSC
Trigger: ACAGGAAAGAGAGAGCCTTCTGGTGAAAATCAAAGTCCTGGAGCAAGACAAGGCAAGGCTGCAGAGGCTGGAGGATGAGCTGAATCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 90 bp ATCAGCCCCTGCAGTTCCAGGGTCCGGTTGTTGCTGATCTGCAGCTaGCTCCTTAGTTCCAAGATGGTTGCATTTTTATCACTGTCCGCT +
Preference number: 5 (lower is better)
Translates to: ISPCSSRVRLLLICS*LLSSKMVAFLSLSA
Trigger: AGCGGACAGTGATAAAAATGCAACCATCTTGGAACTAAGGAGCCAGCTGCAGATCAGCAACAACCGGACCCTGGAACTGCAGGGGCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAGGGTGGGAGCCTCCGTaGCAGCTCATGTCGGCGGGC +
Preference number: 5 (lower is better)
Translates to: SIECPITLLQAPGFSFLLGWEPP*QLMSAG
Trigger: GCCCGCCGACATGAGCTGCAACGGAGGCTCCCACCC...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTGGGTGGGAGCCTCCGTaGCAGCTCATGTCGGCGGGC +
Preference number: 5 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGGWEPP*QLMSAG
Trigger: GCCCGCCGACATGAGCTGCAACGGAGGCTCCCACCC...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAAGCTGGGTGTTGGTGTaGGTCGGCGGCGGAGCGAGT +
Preference number: 5 (lower is better)
Translates to: VRFVLLLQLISTSDALHPSWVLV*VGGGAS
Trigger: ACTCGCTCCGCCGCCGACCAACACCAACACCCAGCT...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418664.2
CDS TCA 90 bp TCTAAGACCCTGGATGGCACCTGGCCTGCACAGGGTTGGCTATCGTaGTGCATTCTCCTTCCATTTCTAACAAAGCTGCATACAGGCAGT +
Preference number: 5 (lower is better)
Translates to: SKTLDGTWPAQGWLS*CILLPFLTKLHTGS
Trigger: ACTGCCTGTATGCAGCTTTGTTAGAAATGGAAGGAGAATGCATCACGATAGCCAACCCTGTGCAGGCCAGGTGCCATCCAGGGTCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684395.1
CDS-3UTR CAA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCGGGCTGGGTAAGCCCTaGGACGACACGGAGGCGGCT +
Preference number: 5 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFGLGKP*DDTEAA
Trigger: AGCCGCCTCCGTGTCGTCCAAGGGCTTACCCAGCCC...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 90 bp ACTGCCTGTCTTTCTATCTACCAGGACCACCCTGGTGGAGCCATCTaGTCCCGTGATGGTTATTTCTTCCCATTCACATTCCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: TACLSIYQDHPGGAI*SRDGYFFPFTFLLT
Trigger: TGTGAGCAGGAATGTGAATGGGAAGAAATAACCATCACGGGATCAGATGGCTCCACCAGGGTGGTCCTGGTAGATAGAAAGACAGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 90 bp AGAGTCATCCTGCCCTCGCAGTGCTCTATCTGCCTGCGAATCTTCTaGAGCTCCATCAGCATCCATGTTTCTTGCTTGTCATTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: RVILPSQCSICLRIF*SSISIHVSCLSFSL
Trigger: CAGAGAAAATGACAAGCAAGAAACATGGATGCTGATGGAGCTGCAGAAGATTCGCAGGCAGATAGAGCACTGCGAGGGCAGGATGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS GCA 90 bp TCGTACTCCAGCCTCAGGTTCCGCAGTTCTTCTTCTAACATCAAGTaGTCCTTGGTCAGGTTCTCTGTGAGAGACTGCAGCCTCTCAATT +
Preference number: 5 (lower is better)
Translates to: SYSSLRFRSSSSNIK*SLVRFSVRDCSLSI
Trigger: AATTGAGAGGCTGCAGTCTCTCACAGAGAACCTGACCAAGGAGCACTTGATGTTAGAAGAAGAACTGCGGAACCTGAGGCTGGAGTACGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CCA 90 bp GAAGCAGATGCTCCAGCGATAGATCCTGCACCCCGAAGGAATGGCTaGATTTCAGAAGCAACTTCTTCCACTGACTTCTTCCCCTTCAAT +
Preference number: 5 (lower is better)
Translates to: EADAPAIDPAPRRNG*ISEATSSTDFFPFN
Trigger: ATTGAAGGGGAAGAAGTCAGTGGAAGAAGTTGCTTCTGAAATCCAGCCATTCCTTCGGGGTGCAGGATCTATCGCTGGAGCATCTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAATGCGGCCCAGAGTGTaGATCCGCGGGTGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: SIECPITLLQAPGFSFLLMRPRV*IRGWEP
Trigger: AGGCTCCCACCCGCGGATCAACACTCTGGGCCGCAT...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACCAGCCTCTGCAGCCTaGCCTTGTCTTGCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: VRFVLLLQLISTSDALHPPASAA*PCLAPG
Trigger: TCCTGGAGCAAGACAAGGCAAGGCTGCAGAGGCTGG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTATAGCTGCTGGTGTCTaGCAGCCTCTGTGCGGCGCG +
Preference number: 5 (lower is better)
Translates to: FSVSIECPITLLQAPGFSIAAGV*QPLCGA
Trigger: CGCGCCGCACAGAGGCTGCAAGACACCAGCAGCTAT...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGATAGCTGCTGGTGTCTaGCAGCCTCTGTGCGGCGCG +
Preference number: 5 (lower is better)
Translates to: MAIFSVSIECPITLLQAPIAAGV*QPLCGA
Trigger: CGCGCCGCACAGAGGCTGCAAGACACCAGCAGCTAT...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 90 bp TTTCATATTCCCAGCGGCGCTTGGCCTCCTCCTGAAACTCAGCTTTaGGTCTCTCGATCTCCTTATTTTTGTCCTGAATGGTCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: FHIPSGAWPPPETQL*VSRSPYFCPEWSWQ
Trigger: CTGCCAAGACCATTCAGGACAAAAATAAGGAGATCGAGAGACTCAAAGCTGAGTTTCAGGAGGAGGCCAAGCGCCGCTGGGAATATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 90 bp TCATTAATCAGCCCCTGCAGTTCCAGGGTCCGGTTGTTGCTGATCTaGAGCTGGCTCCTTAGTTCCAAGATGGTTGCATTTTTATCACTG +
Preference number: 5 (lower is better)
Translates to: SLISPCSSRVRLLLI*SWLLSSKMVAFLSL
Trigger: CAGTGATAAAAATGCAACCATCTTGGAACTAAGGAGCCAGCTGCAGATCAGCAACAACCGGACCCTGGAACTGCAGGGGCTGATTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 90 bp TGTCTCAAATTTTCCCTCTCTCTCTGTAAATCATTAATCAGCCCCTaGAGTTCCAGGGTCCGGTTGTTGCTGATCTGCAGCTGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: CLKFSLSLCKSLISP*SSRVRLLLICSWLL
Trigger: AAGGAGCCAGCTGCAGATCAGCAACAACCGGACCCTGGAACTGCAGGGGCTGATTAATGATTTACAGAGAGAGAGGGAAAATTTGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CCA 90 bp AGCTTCTCATTCCGATGGGGATCAATTATACCACCTGTAGCTGCCTaGGCCTCCAGAAGCATGACTGTGGATTCTGGGCTGATTAATTTC +
Preference number: 5 (lower is better)
Translates to: SFSFRWGSIIPPVAA*ASRSMTVDSGLINF
Trigger: GAAATTAATCAGCCCAGAATCCACAGTCATGCTTCTGGAGGCCCAGGCAGCTACAGGTGGTATAATTGATCCCCATCGGAATGAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTCCCGTCACGTACCACTaGCTGCGCTCGTTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: FSVSIECPITLLQAPGFSPVTYH*LRSLLS
Trigger: GGACAACAACGAGCGCAGCAAGTGGTACGTGACGGG...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGCTCGCAAGCTTCGCTTaGAACTGGGAACACTCTGCC +
Preference number: 5 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGLASFA*NWEHSA
Trigger: GGCAGAGTGTTCCCAGTTCAAAGCGAAGCTTGCGAG...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTCCTCCAGGGACTGCTaGTGCCGGGCATTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: FSVSIECPITLLQAPGFSSSRDC*CRALSS
Trigger: TGAGGACAATGCCCGGCACAAGCAGTCCCTGGAGGA...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS TCA 90 bp CAAGAGATTGCTTATATCTTACGCTCTCCTCTGTTCGCATCTGAGTaGCTTGTCTCAGCTCAACCTCCAGCTGCTGTTTCCTCTGAGACA +
Preference number: 5 (lower is better)
Translates to: QEIAYILRSPLFASE*LVSAQPPAAVSSET
Trigger: TGTCTCAGAGGAAACAGCAGCTGGAGGTTGAGCTGAGACAAGTCACTCAGATGCGAACAGAGGAGAGCGTAAGATATAAGCAATCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS TCA 90 bp GGATCATCAAAACCAGTGATAGCTTTTTCTGCTGCATATATCTGCTaGCGGTCATCGAAGTCAATGAGGTCCCGAGCTATGGCACTGTCG +
Preference number: 5 (lower is better)
Translates to: GSSKPVIAFSAAYIC*RSSKSMRSRAMALS
Trigger: CGACAGTGCCATAGCTCGGGACCTCATTGACTTCGATGACCGTCAGCAGATATATGCAGCAGAAAAAGCTATCACTGGTTTTGATGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 90 bp CACAGGTTGTCTGATTCCTTGGAAGGACATGCTTCTCTTCTGTACTaGAAGCAAGAGCAGACCAGTATGTGGTTCGATTCTGCACCGTTC +
Preference number: 5 (lower is better)
Translates to: HRLSDSLEGHASLLY*KQEQTSMWFDSAPF
Trigger: GAACGGTGCAGAATCGAACCACATACTGGTCTGCTCTTGCTTTCAGTACAGAAGAGAAGCATGTCCTTCCAAGGAATCAGACAACCTGTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 90 bp TCTTTCTATCTACCAGGACCACCCTGGTGGAGCCATCTGATCCCGTaGTGGTTATTTCTTCCCATTCACATTCCTGCTCACACAGTTCTT +
Preference number: 5 (lower is better)
Translates to: SFYLPGPPWWSHLIP*WLFLPIHIPAHTVL
Trigger: AAGAACTGTGTGAGCAGGAATGTGAATGGGAAGAAATAACCATCACGGGATCAGATGGCTCCACCAGGGTGGTCCTGGTAGATAGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 90 bp AGAGTATTTTTCCTTAGGAGAAGCAGATGCTCCAGCGATAGATCCTaGACCCCGAAGGAATGGCTGGATTTCAGAAGCAACTTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: RVFFLRRSRCSSDRS*TPKEWLDFRSNFFH
Trigger: GTGGAAGAAGTTGCTTCTGAAATCCAGCCATTCCTTCGGGGTGCAGGATCTATCGCTGGAGCATCTGCTTCTCCTAAGGAAAAATACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 90 bp TTGGCTCTGGGCGTGCATTGTACAATAATACTAATCAGAGCCAACTaGATCCAAGGCATGTGTTTTATCTCCCTGATCAGGCACAGCTGC +
Preference number: 5 (lower is better)
Translates to: LALGVHCTIILIRAN*IQGMCFISLIRHSC
Trigger: GCAGCTGTGCCTGATCAGGGAGATAAAACACATGCCTTGGATGCAGTTGGCTCTGATTAGTATTATTGTACAATGCACGCCCAGAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682228.1
CDS-3UTR CAA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTCCATCTCCGCCCTTaGCTGCCTCATCCACCCCAA +
Preference number: 5 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWVHLRP*LPHPPQ
Trigger: TTGGGGTGGATGAGGCAGCAAAGGGCGGAGATGGAC...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAGTCCATCTCCGCCCTTaGCTGCCTCATCCACCCCAA +
Preference number: 5 (lower is better)
Translates to: SIECPITLLQAPGFSFLLVHLRP*LPHPPQ
Trigger: TTGGGGTGGATGAGGCAGCAAAGGGCGGAGATGGAC...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAGCGATGTTGGTGTTCTaGTCGCTCCAGTCGTACAGC +
Preference number: 5 (lower is better)
Translates to: VRFVLLLQLISTSDALHPAMLVF*SLQSYS
Trigger: GCTGTACGACTGGAGCGACAAGAACACCAACATCGC...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACTCGCAAGCTTCGCTTaGAACTGGGAACACTCTGCC +
Preference number: 5 (lower is better)
Translates to: VRFVLLLQLISTSDALHPLASFA*NWEHSA
Trigger: GGCAGAGTGTTCCCAGTTCAAAGCGAAGCTTGCGAG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGCCAGCCTCTGCAGCCTaGCCTTGTCTTGCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLPASAA*PCLAPG
Trigger: TCCTGGAGCAAGACAAGGCAAGGCTGCAGAGGCTGG...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCATGCCTGCTATGCAGCTaGAACCCTGGAGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: VRFVLLLQLISTSDALHPCLLCS*NPGGSP
Trigger: AGGACTTCCTCCAGGGTTCAAGCTGCATAGCAGGCA...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 90 bp CCTGCAGTAGAACCCTCAACCTTTCAATCTCGTACTCCTTCTCCTTaGTGGCTTTCTCAGACTCTAATTTCTGCCAACCAAGGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: PAVEPSTFQSRTPSP*WLSQTLISANQGSP
Trigger: AGGAGAACCTTGGTTGGCAGAAATTAGAGTCTGAGAAAGCCATCAAGGAGAAGGAGTACGAGATTGAAAGGTTGAGGGTTCTACTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 90 bp ATCCTCCAGCTTACGCCTGCACCTCTCTTCAATTCTCTTGATCTCTaGTTGGAGTCTTTCGATCTCACTCCTAAGACTGTTCTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: ILQLTPAPLFNSLDL*LESFDLTPKTVLLS
Trigger: AGAGAGAAGAACAGTCTTAGGAGTGAGATCGAAAGACTCCAAGCAGAGATCAAGAGAATTGAAGAGAGGTGCAGGCGTAAGCTGGAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 90 bp TTTATTGTCTCCGTCGCACTACTGTTTGCTTTCTGCAGGTCATACTaGACCCTTTGTAATCTCGCGTTTTCATCTTCCAGGCATTTCCGG +
Preference number: 5 (lower is better)
Translates to: FIVSVALLFAFCRSY*TLCNLAFSSSRHFR
Trigger: CCGGAAATGCCTGGAAGATGAAAACGCGAGATTACAAAGGGTCCAGTATGACCTGCAGAAAGCAAACAGTAGTGCGACGGAGACAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CCA 90 bp CATTCTGAATTTGCTGTTTCTCACACTCCAGGCGCTGTTTCACCCTaGTTTCTGCCTCTAGAGTTGATTTTGCACGATTCAGCTCATCCT +
Preference number: 5 (lower is better)
Translates to: HSEFAVSHTPGAVSP*FLPLELILHDSAHP
Trigger: AGGATGAGCTGAATCGTGCAAAATCAACTCTAGAGGCAGAAACCAGGGTGAAACAGCGCCTGGAGTGTGAGAAACAGCAAATTCAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 90 bp TCCAGCTTACGCCTGCACCTCTCTTCAATTCTCTTGATCTCTGCTTaGAGTCTTTCGATCTCACTCCTAAGACTGTTCTTCTCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: SSLRLHLSSILLISA*SLSISLLRLFFSLS
Trigger: TGAGAGAGAGAAGAACAGTCTTAGGAGTGAGATCGAAAGACTCCAAGCAGAGATCAAGAGAATTGAAGAGAGGTGCAGGCGTAAGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATCGCGCAGGTCGGCTTaGATTTTGTCCAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: SIECPITLLQAPGFSFLLSRRSA*ILSSCQ
Trigger: CTGGCAGCTGGACAAAATCAAAGCCGACCTGCGCGA...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACACTTGCTGCGCTCGTaGTTGTCCTTCAGGATACAC +
Preference number: 5 (lower is better)
Translates to: VRFVLLLQLISTSDALHPHLLRS*LSFRIH
Trigger: GTGTATCCTGAAGGACAACAACGAGCGCAGCAAGTG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGCCCGTCACGTACCACTaGCTGCGCTCGTTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEPVTYH*LRSLLS
Trigger: GGACAACAACGAGCGCAGCAAGTGGTACGTGACGGG...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACGCATTGTTTTCAGCTaGGCGATTGTCATGGCCCTG +
Preference number: 5 (lower is better)
Translates to: VRFVLLLQLISTSDALHPRIVFS*AIVMAL
Trigger: CAGGGCCATGACAATCGCCAAGCTGAAAACAATGCG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCATGCTTGTGCCGGGCATaGTCCTCAGAGCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTACLCRA*SSERCC
Trigger: GCAGCAGCGCTCTGAGGACAATGCCCGGCACAAGCA...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGCCGTCGCACTACTGTTaGCTTTCTGCAGGTCATACT +
Preference number: 5 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGPSHYC*LSAGHT
Trigger: AGTATGACCTGCAGAAAGCAAACAGTAGTGCGACGG...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGCCAAAATGCTTGGTTTaGGGTTGGGGGTTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGPKCLV*GWGFER
Trigger: CCTCTCAAACCCCCAACCCAAAACCAAGCATTTTGG...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 90 bp AGTCGATCTGTTTATCTATCCTTTGCCAGCGGTCTGTCAGCTGTGTaGCTTTTTCACCGAACTTGCCCAAGTCCAGATCATAAAGTGGAT +
Preference number: 5 (lower is better)
Translates to: SRSVYLSFASGLSAV*LFHRTCPSPDHKVD
Trigger: ATCCACTTTATGATCTGGACTTGGGCAAGTTCGGTGAAAAAGTCACACAGCTGACAGACCGCTGGCAAAGGATAGATAAACAGATCGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS GCA 90 bp CCACTTTTCAAATTGTATAGGAGGAAAATCCTGCAAACAGCAAGCTaGTGCCGCCACCTGAGGTCTAGAAGACTCTTTGTCACACAAACA +
Preference number: 5 (lower is better)
Translates to: PLFKLYRRKILQTAS*CRHLRSRRLFVTQT
Trigger: TGTTTGTGTGACAAAGAGTCTTCTAGACCTCAGGTGGCGGCAGCAGCTTGCTGTTTGCAGGATTTTCCTCCTATACAATTTGAAAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683563.1
CDS CCA 90 bp ATCTCTCTGATCAAGCTGTCGAGGATTTCCATTTGGTCATTGGCCTaGGCAAAACACTCATCCAATTCTCGACTCCGAGTCAGTTGTATT +
Preference number: 5 (lower is better)
Translates to: ISLIKLSRISIWSLA*AKHSSNSRLRVSCI
Trigger: AATACAACTGACTCGGAGTCGAGAATTGGATGAGTGTTTTGCCCAGGCCAATGACCAAATGGAAATCCTCGACAGCTTGATCAGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000683563.1
CDS CCA 90 bp TGCTGTTGGATGTCTTCTTCCACCCTCCTGAGATTCTCTGTGGTCTaGGTTAGAGTGTTCTTCAGCCTCTTTATTTCTTCAGATAAGCTC +
Preference number: 5 (lower is better)
Translates to: CCWMSSSTLLRFSVV*VRVFFSLFISSDKL
Trigger: GAGCTTATCTGAAGAAATAAAGAGGCTGAAGAACACTCTAACCCAGACCACAGAGAATCTCAGGAGGGTGGAAGAAGACATCCAACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CCA 90 bp GCCCTTCTTGTAGGCCTCCTGAACAGACATTTCTTTATTGGTTTCTaGGTCAACTATGACCACTCTACGCTTCCTGAGGGTATTCTTTTG +
Preference number: 5 (lower is better)
Translates to: ALLVGLLNRHFFIGF*VNYDHSTLPEGILL
Trigger: CAAAAGAATACCCTCAGGAAGCGTAGAGTGGTCATAGTTGACCCAGAAACCAATAAAGAAATGTCTGTTCAGGAGGCCTACAAGAAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTATCGCGCAGGTCGGCTTaGATTTTGTCCAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLSRRSA*ILSSCQ
Trigger: CTGGCAGCTGGACAAAATCAAAGCCGACCTGCGCGA...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTGCGATGTTGGTGTTCTaGTCGCTCCAGTCGTACAGC +
Preference number: 5 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGAMLVF*SLQSYS
Trigger: GCTGTACGACTGGAGCGACAAGAACACCAACATCGC...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCTGCAGGGGCATGTTCTaGTCGCAGGGGTACTTCTTC +
Preference number: 5 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFCRGMF*SQGYFF
Trigger: GAAGAAGTACCCCTGCGACAAGAACATGCCCCTGCA...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATGCAGGGGCATGTTCTaGTCGCAGGGGTACTTCTTC +
Preference number: 5 (lower is better)
Translates to: SIECPITLLQAPGFSFLLCRGMF*SQGYFF
Trigger: GAAGAAGTACCCCTGCGACAAGAACATGCCCCTGCA...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCATTGCTGCGCTCGTTGTaGTCCTTCAGGATACACTCA +
Preference number: 5 (lower is better)
Translates to: VRFVLLLQLISTSDALHPLLRSL*SFRIHS
Trigger: TGAGTGTATCCTGAAGGACAACAACGAGCGCAGCAA...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCATCCAGGGTCCGGTTGTaGCTGATCTGCAGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTASRVRL*LICSWL
Trigger: GAGCCAGCTGCAGATCAGCAACAACCGGACCCTGGA...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCCATCAAACACCAGCTaGGAGGTGTCAACGGTCCAC +
Preference number: 5 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFPSNTS*EVSTVH
Trigger: GTGGACCGTTGACACCTCCAAGCTGGTGTTTGATGG...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAAGTGACGGTCACAGGTaGTCTGATTCCTTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: VRFVLLLQLISTSDALHPSDGHR*SDSLEG
Trigger: TCCTTCCAAGGAATCAGACAACCTGTGACCGTCACT...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGTGCCTGCTATGCAGCTaGAACCCTGGAGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWCLLCS*NPGGSP
Trigger: AGGACTTCCTCCAGGGTTCAAGCTGCATAGCAGGCA...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGAAAGCCAGTAGCTGCTaGGGCTTCCAGCAACTCCAG +
Preference number: 5 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWKASSC*GFQQLQ
Trigger: CTGGAGTTGCTGGAAGCCCAAGCAGCTACTGGCTTT...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 90 bp TCATTCTGCACACTCTTAAGCTCGTTAATTTTCACTGTGATGTGGTaGGAAGATCCCTGGTCTGCTAGAGGGAGGTTTTTGAGAGTCATC +
Preference number: 5 (lower is better)
Translates to: SFCTLLSSLIFTVMW*EDPWSARGRFLRVI
Trigger: GATGACTCTCAAAAACCTCCCTCTAGCAGACCAGGGATCTTCTCACCACATCACAGTGAAAATTAACGAGCTTAAGAGTGTGCAGAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS TCA 90 bp CTTCCAGGGTGTCTGAAAAAGAGCTGCTCCTTATGGTTAAATTCCTaGCGCTGGATATGGTGGAAATCTTACTTACTGATTCATGTCGGG +
Preference number: 5 (lower is better)
Translates to: LPGCLKKSCSLWLNS*RWIWWKSYLLIHVG
Trigger: CCCGACATGAATCAGTAAGTAAGATTTCCACCATATCCAGCGTCAGGAATTTAACCATAAGGAGCAGCTCTTTTTCAGACACCCTGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 90 bp ACCTTCAGTTTGTTTATTGTCTCCGTCGCACTACTGTTTGCTTTCTaGAGGTCATACTGGACCCTTTGTAATCTCGCGTTTTCATCTTCC +
Preference number: 5 (lower is better)
Translates to: TFSLFIVSVALLFAF*RSYWTLCNLAFSSS
Trigger: GGAAGATGAAAACGCGAGATTACAAAGGGTCCAGTATGACCTGCAGAAAGCAAACAGTAGTGCGACGGAGACAATAAACAAACTGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 90 bp CTTTTCAAATTGTATAGGAGGAAAATCCTGCAAACAGCAAGCTGCTaGCGCCACCTGAGGTCTAGAAGACTCTTTGTCACACAAACACAT +
Preference number: 5 (lower is better)
Translates to: LFKLYRRKILQTASC*RHLRSRRLFVTQTH
Trigger: ATGTGTTTGTGTGACAAAGAGTCTTCTAGACCTCAGGTGGCGGCAGCAGCTTGCTGTTTGCAGGATTTTCCTCCTATACAATTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683563.1
CDS CCA 90 bp CTAAGCCAATTTTCATGGCCTCATAAATGCCAAGCTTCTGTTTTGTaGTCTCATTGTATATGCCTGCTATGCAGCTTGAACCCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: LSQFSWPHKCQASVL*SHCICLLCSLNPGG
Trigger: TCCTCCAGGGTTCAAGCTGCATAGCAGGCATATACAATGAGACCACAAAACAGAAGCTTGGCATTTATGAGGCCATGAAAATTGGCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTGGCTCGCATTTGCTCTaGGAGCTGAAGAAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: FSVSIECPITLLQAPGFSGSHLL*ELKKPF
Trigger: AAAAGGCTTCTTCAGCTCCAAGAGCAAATGCGAGCC...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCTCCTCCTCGCAGTCATaGATCCACATGATCTCCCTG +
Preference number: 5 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFSSSQS*IHMISL
Trigger: CAGGGAGATCATGTGGATCAATGACTGCGAGGAGGA...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTCGCATTGTTTTCAGCTaGGCGATTGTCATGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGRIVFS*AIVMAL
Trigger: CAGGGCCATGACAATCGCCAAGCTGAAAACAATGCG...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAAATCTTCCTGCCGCATaGTTTTCAGCTTGGCGATTG +
Preference number: 5 (lower is better)
Translates to: VRFVLLLQLISTSDALHPNLPAA*FSAWRL
Trigger: CAATCGCCAAGCTGAAAACAATGCGGCAGGAAGATT...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAACATCTGCAGCCTCTaGCAGAATCACCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLNICSL*QNHPRR
Trigger: CCTTCTGGGGTGATTCTGCAAGAGGCTGCAGATGTT...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTACAGTTTTCCGAGTaGGCATCTCGGGCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: SIECPITLLQAPGFSFLLLQFSE*ASRASL
Trigger: CAGACTGGCCCGAGATGCCAACTCGGAAAACTGTAA...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGTGGTGGATGGTGGTCTaGGTGATGTTGATCTCGGTC +
Preference number: 5 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWWWMVV*VMLISV
Trigger: GACCGAGATCAACATCACCAAGACCACCATCCACCA...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTCGCATCTGAGTGACTaGTCTCAGCTCAACCTCCAG +
Preference number: 5 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGSHLSD*SQLNLQ
Trigger: CTGGAGGTTGAGCTGAGACAAGTCACTCAGATGCGA...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCGGTGATTTTGATGGCTaGCTCCTTCAGCGACCTCCT +
Preference number: 5 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFGDFDG*LLQRPP
Trigger: AGGAGGTCGCTGAAGGAGCAAGCCATCAAAATCACC...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCTCTGCAGCCTTGCCTaGTCTTGCTCCAGGACTTTG +
Preference number: 5 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLLCSLA*SCSRTL
Trigger: CAAAGTCCTGGAGCAAGACAAGGCAAGGCTGCAGAG...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGTCTCTTGATCTCTGCTaGGAGTCTTTCGATCTCACT +
Preference number: 5 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGSLDLC*ESFDLT
Trigger: AGTGAGATCGAAAGACTCCAAGCAGAGATCAAGAGA...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAAGCCAGTAGCTGCTaGGGCTTCCAGCAACTCCAG +
Preference number: 5 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLKASSC*GFQQLQ
Trigger: CTGGAGTTGCTGGAAGCCCAAGCAGCTACTGGCTTT...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCGGCTCGCATTTGCTCTaGGAGCTGAAGAAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFGSHLL*ELKKPF
Trigger: AAAAGGCTTCTTCAGCTCCAAGAGCAAATGCGAGCC...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGATAAAGGGCTCGCATTaGCTCTTGGAGCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: MAIFSVSIECPITLLQAPIKGSH*LLELKK
Trigger: CTTCTTCAGCTCCAAGAGCAAATGCGAGCCCTTTAT...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGTCACTGGTGACATGTTaGGTGAACTCATCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWSLVTC*VNSSQP
Trigger: TGGCTGGGATGAGTTCACCAAACATGTCACCAGTGA...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGCACTTGCTGCGCTCGTaGTTGTCCTTCAGGATACAC +
Preference number: 5 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEHLLRS*LSFRIH
Trigger: GTGTATCCTGAAGGACAACAACGAGCGCAGCAAGTG...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGTTACAGTTTTCCGAGTaGGCATCTCGGGCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKELQFSE*ASRASL
Trigger: CAGACTGGCCCGAGATGCCAACTCGGAAAACTGTAA...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGAGAGCCACAGGCCTTTaGCTGAAGGGCGTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKERATGL*LKGVFF
Trigger: GAAGAAAACGCCCTTCAGCAAAAGGCCTGTGGCTCT...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAAGAGCCAGTGGCCTTTaGCTGTTGGATGTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SIECPITLLQAPGFSFLLRASGL*LLDVFF
Trigger: GAAGAAGACATCCAACAGCAAAAGGCCACTGGCTCT...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCACCTTCAGTTTGTTTATaGTCTCCGTCGCACTACTGT +
Preference number: 5 (lower is better)
Translates to: VRFVLLLQLISTSDALHPPSVCL*SPSHYC
Trigger: ACAGTAGTGCGACGGAGACAATAAACAAACTGAAGG...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAGGCGTGTCAGTTCTaGCTCCTGAACCTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFQACQF*LLNLQF
Trigger: AAACTGAAGGTTCAGGAGCAAGAACTGACACGCCTG...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAGCTGCTGGGTCAGGTaGGTGATTTTGATGGCTTGC +
Preference number: 5 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLSCWVR*VILMAC
Trigger: GCAAGCCATCAAAATCACCAACCTGACCCAGCAGCT...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCACCATCAAACACCAGCTaGGAGGTGTCAACGGTCCAC +
Preference number: 5 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAPSNTS*EVSTVH
Trigger: GTGGACCGTTGACACCTCCAAGCTGGTGTTTGATGG...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGACTCATAGAGCTGCATaGCTGTCACCTTCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: MAIFSVSIECPITLLQAPTHRAA*LSPSSS
Trigger: TGAGGAAGAAGGTGACAGCAATGCAGCTCTATGAGT...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAGTGACGGTCACAGGTaGTCTGATTCCTTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLSDGHR*SDSLEG
Trigger: TCCTTCCAAGGAATCAGACAACCTGTGACCGTCACT...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGCCAGATTCCAGTTCATaGACAGTGGACGGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: MAIFSVSIECPITLLQAPPDSSS*TVDGLN
Trigger: ATTGAGACCGTCCACTGTCAATGAACTGGAATCTGG...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGTGTTTTGTGGTCTCATaGTATATGCCTGCTATGCAG +
Preference number: 5 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGCFVVS*YMPAMQ
Trigger: CTGCATAGCAGGCATATACAATGAGACCACAAAACA...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAGATCATGTCAGCAAATaGAGTGAGGCTGAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLDHVSK*SEAEAA
Trigger: GGCAGCCTCAGCCTCACTCAATTTGCTGACATGATC...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGCCAAAATGCTTGGTTTaGGGTTGGGGGTTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWPKCLV*GWGFER
Trigger: CCTCTCAAACCCCCAACCCAAAACCAAGCATTTTGG...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 90 bp TTCAGCTGTACAATCTTCTTAGACTTGTTTACCAAGTTCTGCACCTaGCGCTTGTATTCAAGGATTTTCTCTCGTTCTTTCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: FSCTIFLDLFTKFCT*RLYSRIFSRSFSSS
Trigger: GGAGCTGGAGAAAGAACGAGAGAAAATCCTTGAATACAAGCGTCAGGTGCAGAACTTGGTAAACAAGTCTAAGAAGATTGTACAGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 90 bp GTCACAGAGAGCTCTGAGAATAATGGGTTTATTGCTTCTGTAGTCTaGGTTACGAGGCTTCAGCTGTACAATCTTCTTAGACTTGTTTAC +
Preference number: 5 (lower is better)
Translates to: VTESSENNGFIASVV*VTRLQLYNLLRLVY
Trigger: GTAAACAAGTCTAAGAAGATTGTACAGCTGAAGCCTCGTAACCCAGACTACAGAAGCAATAAACCCATTATTCTCAGAGCTCTCTGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 90 bp CAGTACTTTTCAGAACCTCTGAAGTTGGCAAGCATATCTTTAAGCTaGTTGAGAACCTCAGCAATTGCTTGTGAATCATTCTGCACACTC +
Preference number: 5 (lower is better)
Translates to: QYFSEPLKLASISLS*LRTSAIACESFCTL
Trigger: GAGTGTGCAGAATGATTCACAAGCAATTGCTGAGGTTCTCAACCAGCTTAAAGATATGCTTGCCAACTTCAGAGGTTCTGAAAAGTACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS-3UTR CAA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGGTCGAGGATTTCCATTaGGTCATTGGCCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEVEDFH*VIGLGK
Trigger: TTTGCCCAGGCCAATGACCAAATGGAAATCCTCGAC...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTGTCGAGGATTTCCATTaGGTCATTGGCCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: YGLYNPHSETKGDSFQNAVEDFH*VIGLGK
Trigger: TTTGCCCAGGCCAATGACCAAATGGAAATCCTCGAC...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTATAAAGGGCTCGCATTaGCTCTTGGAGCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGIKGSH*LLELKK
Trigger: CTTCTTCAGCTCCAAGAGCAAATGCGAGCCCTTTAT...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGTCACTGGTGACATGTTaGGTGAACTCATCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKESLVTC*VNSSQP
Trigger: TGGCTGGGATGAGTTCACCAAACATGTCACCAGTGA...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGTCCTCCTCGCAGTCATaGATCCACATGATCTCCCTG +
Preference number: 5 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKSSSQS*IHMISL
Trigger: CAGGGAGATCATGTGGATCAATGACTGCGAGGAGGA...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAATTATGGTTGACATCTaGGCAGGTTCCATGATGAGT +
Preference number: 5 (lower is better)
Translates to: VRFVLLLQLISTSDALHPIMVDI*AGSMMS
Trigger: ACTCATCATGGAACCTGCCAAGATGTCAACCATAAT...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTACTGTTTATCTATCCTTaGCCAGCGGTCTGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLLFIYP*PAVCQL
Trigger: CAGCTGACAGACCGCTGGCAAAGGATAGATAAACAG...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGAACATCTGCAGCCTCTaGCAGAATCACCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKNICSL*QNHPRR
Trigger: CCTTCTGGGGTGATTCTGCAAGAGGCTGCAGATGTT...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTCGGGTGATCTTCTCATaGAGTTCTTTTATTTGGCCG +
Preference number: 5 (lower is better)
Translates to: FSVSIECPITLLQAPGFSRVIFS*SSFIWP
Trigger: CGGCCAAATAAAAGAACTCAATGAGAAGATCACCCG...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCAGTGGCCTTTTGCTGTaGGATGTCTTCTTCCACCCT +
Preference number: 5 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTSGLLL*DVFFHP
Trigger: AGGGTGGAAGAAGACATCCAACAGCAAAAGGCCACT...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTAACATCAAGTGCTCCTaGGTCAGGTTCTCTGTGAGA +
Preference number: 5 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGNIKCS*VRFSVR
Trigger: TCTCACAGAGAACCTGACCAAGGAGCACTTGATGTT...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTCTTGCTCCAGGACTTaGATTTTCACCAGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGSCSRT*IFTRRL
Trigger: GAGCCTTCTGGTGAAAATCAAAGTCCTGGAGCAAGA...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATCTTGCTCCAGGACTTaGATTTTCACCAGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: SIECPITLLQAPGFSFLLSCSRT*IFTRRL
Trigger: GAGCCTTCTGGTGAAAATCAAAGTCCTGGAGCAAGA...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGCCAGATTCCAGTTCATaGACAGTGGACGGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWPDSSS*TVDGLN
Trigger: ATTGAGACCGTCCACTGTCAATGAACTGGAATCTGG...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAGATCATGTCAGCAAATaGAGTGAGGCTGAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTADHVSK*SEAEAA
Trigger: GGCAGCCTCAGCCTCACTCAATTTGCTGACATGATC...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGTCGACTCCGAGTCAGTaGTATTCCATCTCCATACTT +
Preference number: 5 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWSTPSQ*YSISIL
Trigger: AAGTATGGAGATGGAATACAACTGACTCGGAGTCGA...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCATTCTTTAACTTCCAGTaGACTCATGCGTATGGAGAA +
Preference number: 5 (lower is better)
Translates to: VRFVLLLQLISTSDALHPFFNFQ*THAYGE
Trigger: TTCTCCATACGCATGAGTCAACTGGAAGTTAAAGAA...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGTTGCTGCGCTCGTTGTaGTCCTTCAGGATACACTCA +
Preference number: 5 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKLLRSL*SFRIHS
Trigger: TGAGTGTATCCTGAAGGACAACAACGAGCGCAGCAA...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAATCTTCCTGCCGCATaGTTTTCAGCTTGGCGATTG +
Preference number: 5 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLNLPAA*FSAWRL
Trigger: CAATCGCCAAGCTGAAAACAATGCGGCAGGAAGATT...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGGTTGGGGATTACTTTATTATGGTaGACATCTTGGCAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: HTLKLKETHSKMLGFGLGITLLW*TSWQVP
Trigger: TGGAACCTGCCAAGATGTCAACCATAATAAAGTAAT...CCCCAACCCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGTGCATGGATATCTCCTaGATGGTGGTCTTCGTAATG +
Preference number: 5 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLCMDIS*MVVFVM
Trigger: CATTACGAAGACCACCATCAAGGAGATATCCATGCA...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCTGCAAGATGCTGTCATaGAGCCTGACAATTTCATCC +
Preference number: 5 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFCKMLS*SLTISS
Trigger: GGATGAAATTGTCAGGCTCAATGACAGCATCTTGCA...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTCCTCTAGAGTTGATTTaGCACGATTCAGCTCATCCT +
Preference number: 5 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGPLELI*HDSAHP
Trigger: AGGATGAGCTGAATCGTGCAAAATCAACTCTAGAGG...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAGGTCATTCTGAATTaGCTGTTTCTCACACTCCAG +
Preference number: 5 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFQVILN*LFLTLQ
Trigger: CTGGAGTGTGAGAAACAGCAAATTCAGAATGACCTG...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTCTCTCTTCAATTCTCTaGATCTCTGCTTGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: FSVSIECPITLLQAPGFSLSSIL*ISAWSL
Trigger: AAGACTCCAAGCAGAGATCAAGAGAATTGAAGAGAG...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTCTTTGGTATCATCACTaGGATCTGAGAGAATCTCAC +
Preference number: 5 (lower is better)
Translates to: FSVSIECPITLLQAPGFSLWYHH*DLRESH
Trigger: GTGAGATTCTCTCAGATCCAAGTGATGATACCAAAG...AGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTCTGATTGAGGACAAGTaGGTCACTTTCTTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGLIEDK*VTFLFQ
Trigger: CTGAAACAAGAAAGTGACCAACTTGTCCTCAATCAG...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGCTGATTGAGGACAAGTaGGTCACTTTCTTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWLIEDK*VTFLFQ
Trigger: CTGAAACAAGAAAGTGACCAACTTGTCCTCAATCAG...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGTCAGAACCTCTGAAGTaGGCAAGCATATCTTTAAGC +
Preference number: 5 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWSEPLK*ASISLS
Trigger: GCTTAAAGATATGCTTGCCAACTTCAGAGGTTCTGA...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGTCTGATTTGTCTCGTTaGCCAGATATTTCACTGTGC +
Preference number: 5 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLSDLSR*PDISLC
Trigger: GCACAGTGAAATATCTGGCAAACGAGACAAATCAGA...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTACGGGTGATCTTCTCATaGAGTTCTTTTATTTGGCCG +
Preference number: 5 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLRVIFS*SSFIWP
Trigger: CGGCCAAATAAAAGAACTCAATGAGAAGATCACCCG...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTGATCTCGATTTTCCCTaGAAAGTCTATCAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGDLDFP*KVYQAG
Trigger: ACCAGCTTGATAGACTTTCAAGGGAAAATCGAGATC...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGAGCATCATCAAGAGATaGCTTATATCTTACGCTCTC +
Preference number: 5 (lower is better)
Translates to: MAIFSVSIECPITLLQAPSIIKR*LISYAL
Trigger: GAGAGCGTAAGATATAAGCAATCTCTTGATGATGCT...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCTTATCCTGGATGGTTTaGGCAGCATCATCAAGAGAT +
Preference number: 5 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFLSWMV*AASSRD
Trigger: ATCTCTTGATGATGCTGCCAAAACCATCCAGGATAA...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCAAACCTTTCTATCTCCTaGTTTTTATCCTGGATGGTT +
Preference number: 5 (lower is better)
Translates to: VRFVLLLQLISTSDALHPNLSIS*FLSWMV
Trigger: AACCATCCAGGATAAAAACAAGGAGATAGAAAGGTT...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTATTCCTCAAGTGAGCTaGTTTGACACTTTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGIPQVS*FDTFLF
Trigger: GAACAGGAAAGTGTCAAACAAGCTCACTTGAGGAAT...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTACCTCTAGAGTTGATTTaGCACGATTCAGCTCATCCT +
Preference number: 5 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLPLELI*HDSAHP
Trigger: AGGATGAGCTGAATCGTGCAAAATCAACTCTAGAGG...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCTTTCTGCCTCTAGAGTaGATTTTGCACGATTCAGCT +
Preference number: 5 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFFLPLE*ILHDSA
Trigger: AGCTGAATCGTGCAAAATCAACTCTAGAGGCAGAAA...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTACAGGTCATTCTGAATTaGCTGTTTCTCACACTCCAG +
Preference number: 5 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLQVILN*LFLTLQ
Trigger: CTGGAGTGTGAGAAACAGCAAATTCAGAATGACCTG...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCACTCCTTGCGGGAATATaGAGTCTTCCACTGATTCAG +
Preference number: 5 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTALLAGI*SLPLIQ
Trigger: CTGAATCAGTGGAAGACTCAATATTCCCGCAAGGAG...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCTCTCTTGATCTCTGCTaGGAGTCTTTCGATCTCACT +
Preference number: 5 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTSLDLC*ESFDLT
Trigger: AGTGAGATCGAAAGACTCCAAGCAGAGATCAAGAGA...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAATAGTTTGTCCAAGGTaGTTTTGTCGATCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: SIECPITLLQAPGFSFLLIVCPR*FCRSAD
Trigger: GTCAGCTGATCGACAAAACAACCTTGGACAAACTAT...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCTTCCCCTTCAATAGTTaGTCCAAGGTTGTTTTGTCG +
Preference number: 5 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFFPFNS*SKVVLS
Trigger: CGACAAAACAACCTTGGACAAACTATTGAAGGGGAA...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTTCGATTTGTGCTATTGTTACAACTGATTAGCACTTCAGACGCACTGCATCCATTCCTTATTCATGGCTaGGAACAAAGAGATGATGTT +
Preference number: 5 (lower is better)
Translates to: VRFVLLLQLISTSDALHPFLIHG*EQRDDV
Trigger: AACATCATCTCTTTGTTCCAAGCCATGAATAAGGAA...TGGATGCAGTGCGTCTGAAGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTCTTTGGTATCATCACTaGGATCTGAGAGAATCTCAC +
Preference number: 5 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGLWYHH*DLRESH
Trigger: GTGAGATTCTCTCAGATCCAAGTGATGATACCAAAG...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGCTTGTCAATAGCATCTaGAATATCATACTGACTGCC +
Preference number: 5 (lower is better)
Translates to: MAIFSVSIECPITLLQAPLVNSI*NIILTA
Trigger: GGCAGTCAGTATGATATTCAAGATGCTATTGACAAG...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 90 bp CAGATATTTCACTGTGCAAGTTCTTCTGCTCATTCAAAAACCGCATaGCTGTGTTGGAATCTCCAAATTTCATGGATTCTAAGGAATCCT +
Preference number: 5 (lower is better)
Translates to: QIFHCASSSAHSKTA*LCWNLQISWILRNP
Trigger: AGGATTCCTTAGAATCCATGAAATTTGGAGATTCCAACACAGTCATGCGGTTTTTGAATGAGCAGAAGAACTTGCACAGTGAAATATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTAAAGTTGGTCACTTTCTaGTTTCAGCTTATTGAGCTC +
Preference number: 5 (lower is better)
Translates to: SIECPITLLQAPGFSFLLKLVTF*FQLIEL
Trigger: GAGCTCAATAAGCTGAAACAAGAAAGTGACCAACTT...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGACAATCTTCTTAGACTaGTTTACCAAGTTCTGCACC +
Preference number: 5 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWTIFLD*FTKFCT
Trigger: GGTGCAGAACTTGGTAAACAAGTCTAAGAAGATTGT...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTACAATCTTCTTAGACTaGTTTACCAAGTTCTGCACC +
Preference number: 5 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGTIFLD*FTKFCT
Trigger: GGTGCAGAACTTGGTAAACAAGTCTAAGAAGATTGT...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCATTATGGTTGACATCTaGGCAGGTTCCATGATGAGT +
Preference number: 5 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTIMVDI*AGSMMS
Trigger: ACTCATCATGGAACCTGCCAAGATGTCAACCATAAT...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTATATCTTTAAGCTGGTaGAGAACCTCAGCAATTGCT +
Preference number: 5 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGISLSW*RTSAIA
Trigger: AGCAATTGCTGAGGTTCTCAACCAGCTTAAAGATAT...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCTCTGATTTGTCTCGTTaGCCAGATATTTCACTGTGC +
Preference number: 5 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTSDLSR*PDISLC
Trigger: GCACAGTGAAATATCTGGCAAACGAGACAAATCAGA...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATGTACTTCCTCTGATTaGTCTCGTTTGCCAGATATT +
Preference number: 5 (lower is better)
Translates to: SIECPITLLQAPGFSFLLCTSSD*SRLPDI
Trigger: AATATCTGGCAAACGAGACAAATCAGAGGAAGTACA...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCTGTACTTCCTCTGATTaGTCTCGTTTGCCAGATATT +
Preference number: 5 (lower is better)
Translates to: RRVYGLYNPHSETKGDSFCTSSD*SRLPDI
Trigger: AATATCTGGCAAACGAGACAAATCAGAGGAAGTACA...GAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGCGGTCATTTGTTTCTTaGTCGATCAGTTGTTTTAAC +
Preference number: 5 (lower is better)
Translates to: MAIFSVSIECPITLLQAPRSFVS*SISCFN
Trigger: GTTAAAACAACTGATCGACAAAGAAACAAATGACCG...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp GGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTAGTTCCAAGATGGTaGCATTTTTATCACTGTCCG +
Preference number: 5 (lower is better)
Translates to: GYTIHTLKLKETHSKMLGLVPRW*HFYHCP
Trigger: CGGACAGTGATAAAAATGCAACCATCTTGGAACTAA...ACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTTTCTGCCTCTAGAGTaGATTTTGCACGATTCAGCT +
Preference number: 5 (lower is better)
Translates to: YGLYNPHSETKGDSFQNAFLPLE*ILHDSA
Trigger: AGCTGAATCGTGCAAAATCAACTCTAGAGGCAGAAA...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp ATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTCTCTCTTCAATTCTCTaGATCTCTGCTTGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: MGYTIHTLKLKETHSKMLLSSIL*ISAWSL
Trigger: AAGACTCCAAGCAGAGATCAAGAGAATTGAAGAGAG...AAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGATAGTTTGTCCAAGGTaGTTTTGTCGATCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKEIVCPR*FCRSAD
Trigger: GTCAGCTGATCGACAAAACAACCTTGGACAAACTAT...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGCCAAGCTTCTGTTTaGTGGTCTCATTGTATATGC +
Preference number: 5 (lower is better)
Translates to: YGLYNPHSETKGDSFQNACQASV*WSHCIC
Trigger: GCATATACAATGAGACCACAAAACAGAAGCTTGGCA...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCTGCCAAGCTTCTGTTTaGTGGTCTCATTGTATATGC +
Preference number: 5 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTCQASV*WSHCIC
Trigger: GCATATACAATGAGACCACAAAACAGAAGCTTGGCA...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTGGTAACCTCAAGTaGCTAACAGGATCCACTATA +
Preference number: 5 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKETGNLK*LTGSTI
Trigger: TATAGTGGATCCTGTTAGCAACTTGAGGTTACCAGT...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp ATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAAGCACCGACAGACATTTCTTTATaGGTTTCTGGGTCAACTATG +
Preference number: 5 (lower is better)
Translates to: MAIFSVSIECPITLLQAPTDISL*VSGSTM
Trigger: CATAGTTGACCCAGAAACCAATAAAGAAATGTCTGT...CGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTTGGTTTTGGTCCAAAACTTCGATCTaGGTATTTTTCAGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: YNPHSETKGDSFQNAWFWSKTSI*VFFSFR
Trigger: TCTGAAGCTGAAAAATACCAAGATCGAAGTTTTGGA...CCAAAACCAAGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAGGAATCATCCTCTTTTaGCATGGATATCTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLGIILF*HGYLLD
Trigger: ATCAAGGAGATATCCATGCAAAAAGAGGATGATTCC...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAGGCATTTCCGGTCATTaGTTTCTTTGTCGATCAGTT +
Preference number: 5 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTAGISGH*FLCRSV
Trigger: AACTGATCGACAAAGAAACAAATGACCGGAAATGCC...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS-3UTR CAA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGTTCCCCTTCAATAGTTaGTCCAAGGTTGTTTTGTCG +
Preference number: 5 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKFPFNS*SKVVLS
Trigger: CGACAAAACAACCTTGGACAAACTATTGAAGGGGAA...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TTCAATCATGGCTATATTTTCTGTAAGCATAGAATGTCCTATCACTCTACTGCAACTGGTAACCTCAAGTaGCTAACAGGATCCACTATA +
Preference number: 5 (lower is better)
Translates to: FNHGYIFCKHRMSYHSTATGNLK*LTGSTI
Trigger: TATAGTGGATCCTGTTAGCAACTTGAGGTTACCAGT...TGCAGTAGAGTGATAGGACATTCTATGCTTACAGAAAATATAGCCATGATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AGCATAGAATGTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTCCTTATTCATGGCTaGGAACAAAGAGATGATGTT +
Preference number: 5 (lower is better)
Translates to: SIECPITLLQAPGFSFLLFLIHG*EQRDDV
Trigger: AACATCATCTCTTTGTTCCAAGCCATGAATAAGGAA...TAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGACATTCTATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAAAGGAGCTTGTCAATAGCATCTaGAATATCATACTGACTGCC +
Preference number: 5 (lower is better)
Translates to: KYIEEYMGYTIHTLKLKELVNSI*NIILTA
Trigger: GGCAGTCAGTATGATATTCAAGATGCTATTGACAAG...CTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp ACCAAACCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGGTTCGATTTGTGCTATaGTTACAACTGATTAGCACT +
Preference number: 5 (lower is better)
Translates to: TKPNKYIEEYMGYTIHTLVRFVL*LQLIST
Trigger: AGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC...CAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGGTTTGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGAAGTTGGTCACTTTCTaGTTTCAGCTTATTGAGCTC +
Preference number: 5 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKKLVTF*FQLIEL
Trigger: GAGCTCAATAAGCTGAAACAAGAAAGTGACCAACTT...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp AAAACTTTGACCAAAGAAAAGATTGCCGCTGTCATGCACAGTCAAATTAATACCTCCAAAACTTCGATCTaGGTATTTTTCAGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: KTLTKEKIAAVMHSQINTSKTSI*VFFSFR
Trigger: TCTGAAGCTGAAAAATACCAAGATCGAAGTTTTGGA...GGTATTAATTTGACTGTGCATGACAGCGGCAATCTTTTCTTTGGTCAAAGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp TATGGGTTATACAATCCACACTCTGAAACTAAAGGAGACTCATTCCAAAATGCTACAGACATTTCTTTATaGGTTTCTGGGTCAACTATG +
Preference number: 5 (lower is better)
Translates to: YGLYNPHSETKGDSFQNATDISL*VSGSTM
Trigger: CATAGTTGACCCAGAAACCAATAAAGAAATGTCTGT...AGCATTTTGGAATGAGTCTCCTTTAGTTTCAGAGTGTGGATTGTATAACCCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp CCAAACAAGTACATCGAAGAGTATATGGGTTATACAATCCACACTCTGAAACTAGTTCGATTTGTGCTATaGTTACAACTGATTAGCACT +
Preference number: 5 (lower is better)
Translates to: PNKYIEEYMGYTIHTLKLVRFVL*LQLIST
Trigger: AGTGCTAATCAGTTGTAACAATAGCACAAATCGAAC...TAGTTTCAGAGTGTGGATTGTATAACCCATATACTCTTCGATGTACTTGTTTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS-3UTR CAA 90 bp GTCCTATCACTCTACTGCAAGCACCGGGATTTTCTTTTCTATTATTTAATAAAGATTACTTTATTATGGTaGACATCTTGGCAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: VLSLYCKHRDFLFYYLIKITLLW*TSWQVP
Trigger: TGGAACCTGCCAAGATGTCAACCATAATAAAGTAAT...CTTTATTAAATAATAGAAAAGAAAATCCCGGTGCTTGCAGTAGAGTGATAGGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 72 bp GAACCGGGCGGGAGTGCGGAAGGCTCGCGAGGTCGCTaGTCGCTACCTGGGCCCTCCCGAGGCCGCTGCGAG +
Preference number: 6 (lower is better)
Translates to: EPGGSAEGSRGR*SLPGPSRGRCE
Trigger: CTCGCAGCGGCCTCGGGAGGGCCCAGGTAGCGAGCAGCGACCTCGCGAGCCTTCCGCACTCCCGCCCGGTTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 72 bp GAGTGCGGAAGGCTCGCGAGGTCGCTGCTCGCTACCTaGGCCCTCCCGAGGCCGCTGCGAGCGCGGAGACGG +
Preference number: 6 (lower is better)
Translates to: ECGRLARSLLAT*ALPRPLRARRR
Trigger: CCGTCTCCGCGCTCGCAGCGGCCTCGGGAGGGCCCAGGTAGCGAGCAGCGACCTCGCGAGCCTTCCGCACTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 90 bp CGCAGGTCCGGGCCAGACTCGGCGCGGATCATGCGGCCCAGAGTGTaGATCCGCGGGTGGGAGCCTCCGTTGCAGCTCATGTCGGCGGGC +
Preference number: 6 (lower is better)
Translates to: RRSGPDSARIMRPRV*IRGWEPPLQLMSAG
Trigger: GCCCGCCGACATGAGCTGCAACGGAGGCTCCCACCCGCGGATCAACACTCTGGGCCGCATGATCCGCGCCGAGTCTGGCCCGGACCTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 72 bp GAGGGCGGCAAGGGCGCAGAGGAGCTGCGTCGGAGCTaGGTGTTGGTGTTGGTCGGCGGCGGAGCGAGTCTC +
Preference number: 6 (lower is better)
Translates to: EGGKGAEELRRS*VLVLVGGGASL
Trigger: GAGACTCGCTCCGCCGCCGACCAACACCAACACCCAGCTCCGACGCAGCTCCTCTGCGCCCTTGCCGCCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418664.2
CDS CAA 90 bp CGGATCATGCGGCCCAGAGTGTTGATCCGCGGGTGGGAGCCTCCGTaGCAGCTCATGTCGGCGGGCAATCGGGAGAGCGGCTCAGCGCCG +
Preference number: 6 (lower is better)
Translates to: RIMRPRVLIRGWEPP*QLMSAGNRESGSAP
Trigger: CGGCGCTGAGCCGCTCTCCCGATTGCCCGCCGACATGAGCTGCAACGGAGGCTCCCACCCGCGGATCAACACTCTGGGCCGCATGATCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 72 bp GAGAATAGTACATCCTGCTGGTGCCCCCGCCGCCGCTaGTCACCTCGTAGCGCAGGTCCGGGCCAGACTCGG +
Preference number: 6 (lower is better)
Translates to: ENSTSCWCPRRR*SPRSAGPGQTR
Trigger: CCGAGTCTGGCCCGGACCTGCGCTACGAGGTGACCAGCGGCGGCGGGGGCACCAGCAGGATGTACTATTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp GGCCAGACTCGGCGCGGATCATGCGGCCCAGAGTGTTaGTCCGCGGGTGGGAGCCTCCGTTGCAGCTCATGT +
Preference number: 6 (lower is better)
Translates to: GQTRRGSCGPEC*SAGGSLRCSSC
Trigger: ACATGAGCTGCAACGGAGGCTCCCACCCGCGGATCAACACTCTGGGCCGCATGATCCGCGCCGAGTCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 72 bp GCGCGGATCATGCGGCCCAGAGTGTTGATCCGCGGGTaGGAGCCTCCGTTGCAGCTCATGTCGGCGGGCAAT +
Preference number: 6 (lower is better)
Translates to: ARIMRPRVLIRG*EPPLQLMSAGN
Trigger: ATTGCCCGCCGACATGAGCTGCAACGGAGGCTCCCACCCGCGGATCAACACTCTGGGCCGCATGATCCGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 72 bp AGCGGGACCCCGGAGCCGAAGACATGTTGTAAGGGCTaGGTAAGCCCTTGGACGACACGGAGGCGGCTTCCA +
Preference number: 6 (lower is better)
Translates to: SGTPEPKTCCKG*VSPWTTRRRLP
Trigger: TGGAAGCCGCCTCCGTGTCGTCCAAGGGCTTACCCAGCCCTTACAACATGTCTTCGGCTCCGGGGTCCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 72 bp GAGCCGAAGACATGTTGTAAGGGCTGGGTAAGCCCTTaGACGACACGGAGGCGGCTTCCAGAAGGCGCAGCC +
Preference number: 6 (lower is better)
Translates to: EPKTCCKGWVSP*TTRRRLPEGAA
Trigger: GGCTGCGCCTTCTGGAAGCCGCCTCCGTGTCGTCCAAGGGCTTACCCAGCCCTTACAACATGTCTTCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp GGGGCAGGTCAGGATTTTGGCATAGCTGCTGGTGTCTaGCAGCCTCTGTGCGGCGCGGCCATCTATGAACCC +
Preference number: 6 (lower is better)
Translates to: GAGQDFGIAAGV*QPLCGAAIYEP
Trigger: GGGTTCATAGATGGCCGCGCCGCACAGAGGCTGCAAGACACCAGCAGCTATGCCAAAATCCTGACCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp TGCCGGTTTGACAGTAGCCGTCCGAGTTCTGGTCGGTaGTCACGCCGCGCCGAGAATAGTACATCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: CRFDSSRPSSGR*SRRAENSTSCW
Trigger: CCAGCAGGATGTACTATTCTCGGCGCGGCGTGATCACCGACCAGAACTCGGACGGCTACTGTCAAACCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000683563.1
ENST00000683682.1
CDS TCA 72 bp TGGTGTCTTGCAGCCTCTGTGCGGCGCGGCCATCTATaGACCCCTTCCGGATGGCTTCTTCGGTGCTTATCC +
Preference number: 6 (lower is better)
Translates to: WCLAASVRRGHL*TPSGWLLRCLS
Trigger: GGATAAGCACCGAAGAAGCCATCCGGAAGGGGTTCATAGATGGCCGCGCCGCACAGAGGCTGCAAGACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 72 bp TGTCAACGCCTCCCGGGCCCGTCACGTACCACTTGCTaGGCTCGTTGTTGTCCTTCAGGATACACTCATCCC +
Preference number: 6 (lower is better)
Translates to: CQRLPGPSRTTC*ARCCPSGYTHP
Trigger: GGGATGAGTGTATCCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCGGGAGGCGTTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 72 bp GATTTTGGCATAGCTGCTGGTGTCTTGCAGCCTCTGTaGGGCGCGGCCATCTATGAACCCCTTCCGGATGGC +
Preference number: 6 (lower is better)
Translates to: DFGIAAGVLQPL*GAAIYEPLPDG
Trigger: GCCATCCGGAAGGGGTTCATAGATGGCCGCGCCGCACAGAGGCTGCAAGACACCAGCAGCTATGCCAAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp CCCGGGCCCGTCACGTACCACTTGCTGCGCTCGTTGTaGTCCTTCAGGATACACTCATCCCCCTTATGCACG +
Preference number: 6 (lower is better)
Translates to: PGPVTYHLLRSL*SFRIHSSPLCT
Trigger: CGTGCATAAGGGGGATGAGTGTATCCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp CCTCCCGGGCCCGTCACGTACCACTTGCTGCGCTCGTaGTTGTCCTTCAGGATACACTCATCCCCCTTATGC +
Preference number: 6 (lower is better)
Translates to: PPGPVTYHLLRS*LSFRIHSSPLC
Trigger: GCATAAGGGGGATGAGTGTATCCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 90 bp GAGGGAACAAGCATGTCAACGCCTCCCGGGCCCGTCACGTACCACTaGCTGCGCTCGTTGTTGTCCTTCAGGATACACTCATCCCCCTTA +
Preference number: 6 (lower is better)
Translates to: EGTSMSTPPGPVTYH*LRSLLSFRIHSSPL
Trigger: TAAGGGGGATGAGTGTATCCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCGGGAGGCGTTGACATGCTTGTTCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 90 bp ACATGGGCTGACCCCATCGTGCTGGAACGTCTGGCCTGCACAGGTTaGGGCTGTTCAAGAAGCTGCTTACCCTTTGCTGCCTCATCCACC +
Preference number: 6 (lower is better)
Translates to: TWADPIVLERLACTG*GCSRSCLPFAASST
Trigger: GGTGGATGAGGCAGCAAAGGGTAAGCAGCTTCTTGAACAGCCCAAACCTGTGCAGGCCAGACGTTCCAGCACGATGGGGTCAGCCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683563.1
CDS TCA 72 bp TTGGTCAATCACACCCTGGGAGACTGCGTCCTGAAGTaGCAGCTTCTGGCCCGTGGTTGGGTGGATGATGCC +
Preference number: 6 (lower is better)
Translates to: LVNHTLGDCVLK*QLLARGWVDDA
Trigger: GGCATCATCCACCCAACCACGGGCCAGAAGCTGTCACTTCAGGACGCAGTCTCCCAGGGTGTGATTGACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 72 bp GCATGTCAACGCCTCCCGGGCCCGTCACGTACCACTTaGTGCGCTCGTTGTTGTCCTTCAGGATACACTCAT +
Preference number: 6 (lower is better)
Translates to: ACQRLPGPSRTT*CARCCPSGYTH
Trigger: ATGAGTGTATCCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCGGGAGGCGTTGACATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 72 bp CCCTTCCGGATGGCTTCTTCGGTGCTTATCCTCCCATaGACTTCCGGGTCAACAAGACCTCCCGTGAGGTAC +
Preference number: 6 (lower is better)
Translates to: PFRMASSVLILP*TSGSTRPPVRY
Trigger: GTACCTCACGGGAGGTCTTGTTGACCCGGAAGTGCATGGGAGGATAAGCACCGAAGAAGCCATCCGGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 72 bp ACATGGGCTGACCCCATCGTGCTGGAACGTCTGGCCTaGACAGGTTTGGGCTGTTCAAGAAGCTGCTTACCC +
Preference number: 6 (lower is better)
Translates to: TWADPIVLERLA*TGLGCSRSCLP
Trigger: GGGTAAGCAGCTTCTTGAACAGCCCAAACCTGTGCAGGCCAGACGTTCCAGCACGATGGGGTCAGCCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683563.1
CDS CCA 72 bp CGCATCAAGCAGTCGGAGCAGTTCTGCAGCAGCTCCTaGATGGTGTTCTGGTTCTGGTGCCTGGACATCGTG +
Preference number: 6 (lower is better)
Translates to: RIKQSEQFCSSS*MVFWFWCLDIV
Trigger: CACGATGTCCAGGCACCAGAACCAGAACACCATCCAGGAGCTGCTGCAGAACTGCTCCGACTGCTTGATGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000683563.1
ENST00000683682.1
CDS CCA 72 bp AGCTTGGAGGTGTCAACGGTCCACTCACACTCAGTCTaGGTCTCTCGATGGGACCCATATGGGCGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: SLEVSTVHSHSV*VSRWDPYGRCL
Trigger: CAGACAGCGCCCATATGGGTCCCATCGAGAGACCCAGACTGAGTGTGAGTGGACCGTTGACACCTCCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp AGCATGTCAACGCCTCCCGGGCCCGTCACGTACCACTaGCTGCGCTCGTTGTTGTCCTTCAGGATACACTCA +
Preference number: 6 (lower is better)
Translates to: SMSTPPGPVTYH*LRSLLSFRIHS
Trigger: TGAGTGTATCCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCGGGAGGCGTTGACATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp GACCCCATCGTGCTGGAACGTCTGGCCTGCACAGGTTaGGGCTGTTCAAGAAGCTGCTTACCCTTTGCTGCC +
Preference number: 6 (lower is better)
Translates to: DPIVLERLACTG*GCSRSCLPFAA
Trigger: GGCAGCAAAGGGTAAGCAGCTTCTTGAACAGCCCAAACCTGTGCAGGCCAGACGTTCCAGCACGATGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683563.1
CDS TCA 72 bp CACCCTTGGAGCTGGCCCTGCGGACTCGAGGGACACTaGTGGCTTTATAAAGGGCTCGCATTTGCTCTTGGA +
Preference number: 6 (lower is better)
Translates to: HPWSWPCGLEGH*WLYKGLAFALG
Trigger: TCCAAGAGCAAATGCGAGCCCTTTATAAAGCCATCAGTGTCCCTCGAGTCCGCAGGGCCAGCTCCAAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000683563.1
CDS TCA 72 bp ATGTCTTGGTCAATCACACCCTGGGAGACTGCGTCCTaGAGTGACAGCTTCTGGCCCGTGGTTGGGTGGATG +
Preference number: 6 (lower is better)
Translates to: MSWSITPWETAS*SDSFWPVVGWM
Trigger: CATCCACCCAACCACGGGCCAGAAGCTGTCACTTCAGGACGCAGTCTCCCAGGGTGTGATTGACCAAGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp CTCCCTGATCAGGCACAGCTGCTGAGGTTCTGGGTCTaGGACGATACCTCCAGCTCCTTGATCTGTTCCAGC +
Preference number: 6 (lower is better)
Translates to: LPDQAQLLRFWV*DDTSSSLICSS
Trigger: GCTGGAACAGATCAAGGAGCTGGAGGTATCGTCTCAGACCCAGAACCTCAGCAGCTGTGCCTGATCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682228.1
CDS GCA 72 bp AGGGACTGCTTGTGCCGGGCATTGTCCTCAGAGCGCTaGTGCATGACCTGCTTCAGTTCTATCTCCAGATGC +
Preference number: 6 (lower is better)
Translates to: RDCLCRALSSER*CMTCFSSISRC
Trigger: GCATCTGGAGATAGAACTGAAGCAGGTCATGCAGCAGCGCTCTGAGGACAATGCCCGGCACAAGCAGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 72 bp TGCTTTTCCCTCAGGTGGCCATCCAGCACGTCCCTCTaGTGCCGGAGGTCATCCTCACTCCTCTTCTTAACA +
Preference number: 6 (lower is better)
Translates to: CFSLRWPSSTSL*CRRSSSLLFLT
Trigger: TGTTAAGAAGAGGAGTGAGGATGACCTCCGGCAGCAGAGGGACGTGCTGGATGGCCACCTGAGGGAAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 72 bp GGAACAGGGAAAGCTTACAGGCTGCACGATGAGCTCTaGTCGCATCAAGCAGTCGGAGCAGTTCTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: GTGKAYRLHDEL*SHQAVGAVLQQ
Trigger: CTGCTGCAGAACTGCTCCGACTGCTTGATGCGAGCAGAGCTCATCGTGCAGCCTGTAAGCTTTCCCTGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683682.1
CDS CAA 72 bp CTCCAGCTGCTGGGTCAGGTTGGTGATTTTGATGGCTaGCTCCTTCAGCGACCTCCTCATGCCTTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LQLLGQVGDFDG*LLQRPPHAFQL
Trigger: GAGCTGGAAGGCATGAGGAGGTCGCTGAAGGAGCAAGCCATCAAAATCACCAACCTGACCCAGCAGCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 90 bp ATGTCAACGCCTCCCGGGCCCGTCACGTACCACTTGCTGCGCTCGTaGTTGTCCTTCAGGATACACTCATCCCCCTTATGCACGATTTTC +
Preference number: 6 (lower is better)
Translates to: MSTPPGPVTYHLLRS*LSFRIHSSPLCTIF
Trigger: GAAAATCGTGCATAAGGGGGATGAGTGTATCCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCGGGAGGCGTTGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp GGTGAGAAGATCCCTGGTCTGCTAGAGGGAGGTTTTTaGGAGTCATCCTGCCCTCGCAGTGCTCTATCTGCC +
Preference number: 6 (lower is better)
Translates to: GEKIPGLLEGGF*ESSCPRSALSA
Trigger: GGCAGATAGAGCACTGCGAGGGCAGGATGACTCTCAAAAACCTCCCTCTAGCAGACCAGGGATCTTCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS TCA 72 bp GCTTGTGCCGGGCATTGTCCTCAGAGCGCTGCTGCATaGCCTGCTTCAGTTCTATCTCCAGATGCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: ACAGHCPQSAAA*PASVLSPDAAS
Trigger: AGAAGCAGCATCTGGAGATAGAACTGAAGCAGGTCATGCAGCAGCGCTCTGAGGACAATGCCCGGCACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS TCA 72 bp ACGACACGGAGGCGGCTTCCAGAAGGCGCAGCCCAGTaGTATCTTCTACCATGGAGCGATTTATGGCATCCT +
Preference number: 6 (lower is better)
Translates to: TTRRRLPEGAAQ*YLLPWSDLWHP
Trigger: AGGATGCCATAAATCGCTCCATGGTAGAAGATATCACTGGGCTGCGCCTTCTGGAAGCCGCCTCCGTGTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp GGTCTAGAAGACTCTTTGTCACACAAACACATGGGCTaGCCCCATCGTGCTGGAACGTCTGGCCTGCACAGG +
Preference number: 6 (lower is better)
Translates to: GLEDSLSHKHMG*PHRAGTSGLHR
Trigger: CCTGTGCAGGCCAGACGTTCCAGCACGATGGGGTCAGCCCATGTGTTTGTGTGACAAAGAGTCTTCTAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683563.1
CDS TCA 72 bp AGCGATGGGAACAGGGAAAGCTTACAGGCTGCACGATaGGCTCTGCTCGCATCAAGCAGTCGGAGCAGTTCT +
Preference number: 6 (lower is better)
Translates to: SDGNRESLQAAR*ALLASSSRSSS
Trigger: AGAACTGCTCCGACTGCTTGATGCGAGCAGAGCTCATCGTGCAGCCTGTAAGCTTTCCCTGTTCCCATCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683682.1
CDS GCA 72 bp TGCCGGGCATTGTCCTCAGAGCGCTGCTGCATGACCTaGTTCAGTTCTATCTCCAGATGCTGCTTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: CRALSSERCCMT*FSSISRCCFFC
Trigger: GCAGAAGAAGCAGCATCTGGAGATAGAACTGAAGCAGGTCATGCAGCAGCGCTCTGAGGACAATGCCCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 72 bp TTTTCCCTCAGGTGGCCATCCAGCACGTCCCTCTGCTaGCGGAGGTCATCCTCACTCCTCTTCTTAACAATG +
Preference number: 6 (lower is better)
Translates to: FSLRWPSSTSLC*RRSSSLLFLTM
Trigger: CATTGTTAAGAAGAGGAGTGAGGATGACCTCCGGCAGCAGAGGGACGTGCTGGATGGCCACCTGAGGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 72 bp CTCTTTGTCACACAAACACATGGGCTGACCCCATCGTaGTGGAACGTCTGGCCTGCACAGGTTTGGGCTGTT +
Preference number: 6 (lower is better)
Translates to: LFVTQTHGLTPS*WNVWPAQVWAV
Trigger: AACAGCCCAAACCTGTGCAGGCCAGACGTTCCAGCACGATGGGGTCAGCCCATGTGTTTGTGTGACAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683563.1
CDS CCA 72 bp TTCTTGTCGCAGGGGTACTTCTTCCTGATGGAGTCCTaGAGCCCCTTCAGGTATGCTTCAGTAGACTGCGCC +
Preference number: 6 (lower is better)
Translates to: FLSQGYFFLMES*SPFRYASVDCA
Trigger: GGCGCAGTCTACTGAAGCATACCTGAAGGGGCTCCAGGACTCCATCAGGAAGAAGTACCCCTGCGACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000682228.1
CDS CAA 72 bp TTGATCTGTTCCAGCAGGTGCTGCAGGGGCATGTTCTaGTCGCAGGGGTACTTCTTCCTGATGGAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: LICSSRCCRGMF*SQGYFFLMESW
Trigger: CCAGGACTCCATCAGGAAGAAGTACCCCTGCGACAAGAACATGCCCCTGCAGCACCTGCTGGAACAGATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000682228.1
CDS CAA 90 bp CTCCAGATGCTGCTTCTTCTGCATTATCTCAGAGCCACAGGCCTTTaGCTGAAGGGCGTTTTCTTCAGCTCGCCTTCGCTGCTCAGTGGC +
Preference number: 6 (lower is better)
Translates to: LQMLLLLHYLRATGL*LKGVFFSSPSLLSG
Trigger: GCCACTGAGCAGCGAAGGCGAGCTGAAGAAAACGCCCTTCAGCAAAAGGCCTGTGGCTCTGAGATAATGCAGAAGAAGCAGCATCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS TCA 72 bp TTTCCCTTCACACCCTCGAAGCCTATGAAGGCTTTCTaGGCAGGCTTCAGCCTGGTGGCCATGTCTTGGTCA +
Preference number: 6 (lower is better)
Translates to: FPFTPSKPMKAF*AGFSLVAMSWS
Trigger: TGACCAAGACATGGCCACCAGGCTGAAGCCTGCTCAGAAAGCCTTCATAGGCTTCGAGGGTGTGAAGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp AACAGGCTCAAGACAAGCATCTACAGCCGCGTGGGGTaGACTTACGGAGAAGGCCTCCTGTTTCTGAGCGAT +
Preference number: 6 (lower is better)
Translates to: NRLKTSIYSRVG*TYGEGLLFLSD
Trigger: ATCGCTCAGAAACAGGAGGCCTTCTCCGTAAGTTCACCCCACGCGGCTGTAGATGCTTGTCTTGAGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506617.1
CDS GCA 72 bp AGAGGGAGGTTTTTGAGAGTCATCCTGCCCTCGCAGTaGTCTATCTGCCTGCGAATCTTCTGCAGCTCCATC +
Preference number: 6 (lower is better)
Translates to: RGRFLRVILPSQ*SICLRIFCSSI
Trigger: GATGGAGCTGCAGAAGATTCGCAGGCAGATAGAGCACTGCGAGGGCAGGATGACTCTCAAAAACCTCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS GCA 72 bp AGCCCCTGCAGTTCCAGGGTCCGGTTGTTGCTGATCTaGAGCTGGCTCCTTAGTTCCAAGATGGTTGCATTT +
Preference number: 6 (lower is better)
Translates to: SPCSSRVRLLLI*SWLLSSKMVAF
Trigger: AAATGCAACCATCTTGGAACTAAGGAGCCAGCTGCAGATCAGCAACAACCGGACCCTGGAACTGCAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CCA 72 bp TGCGTATGGAGAAGGCCTCCTGTTTCTGAGCGATGTTaGTGTTCTTGTCGCTCCAGTCGTACAGCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: CVWRRPPVSERC*CSCRSSRTAAP
Trigger: AGGAGCTGCTGTACGACTGGAGCGACAAGAACACCAACATCGCTCAGAAACAGGAGGCCTTCTCCATACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000682228.1
CDS CCA 72 bp TTTGTCACACAAACACATGGGCTGACCCCATCGTGCTaGAACGTCTGGCCTGCACAGGTTTGGGCTGTTCAA +
Preference number: 6 (lower is better)
Translates to: FVTQTHGLTPSC*NVWPAQVWAVQ
Trigger: TTGAACAGCCCAAACCTGTGCAGGCCAGACGTTCCAGCACGATGGGGTCAGCCCATGTGTTTGTGTGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683563.1
CDS CAA 90 bp CTCCAGCTGCTGTTTCCTCTGAGACACCTCAGAGCCAGTGGCCTTTaGCTGTTGGATGTCTTCTTCCACCCTCCTGAGATTCTCTGTGGT +
Preference number: 6 (lower is better)
Translates to: LQLLFPLRHLRASGL*LLDVFFHPPEILCG
Trigger: ACCACAGAGAATCTCAGGAGGGTGGAAGAAGACATCCAACAGCAAAAGGCCACTGGCTCTGAGGTGTCTCAGAGGAAACAGCAGCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 90 bp ACTCCAGGCGCTGTTTCACCCTGGTTTCTGCCTCTAGAGTTGATTTaGCACGATTCAGCTCATCCTCCAGCCTCTGCAGCCTTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: TPGAVSPWFLPLELI*HDSAHPPASAALPC
Trigger: ACAAGGCAAGGCTGCAGAGGCTGGAGGATGAGCTGAATCGTGCAAAATCAACTCTAGAGGCAGAAACCAGGGTGAAACAGCGCCTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 90 bp TCTCACACTCCAGGCGCTGTTTCACCCTGGTTTCTGCCTCTAGAGTaGATTTTGCACGATTCAGCTCATCCTCCAGCCTCTGCAGCCTTG +
Preference number: 6 (lower is better)
Translates to: SHTPGAVSPWFLPLE*ILHDSAHPPASAAL
Trigger: CAAGGCTGCAGAGGCTGGAGGATGAGCTGAATCGTGCAAAATCAACTCTAGAGGCAGAAACCAGGGTGAAACAGCGCCTGGAGTGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp CCCAGCGGCGCTTGGCCTCCTCCTGAAACTCAGCTTTaGGTCTCTCGATCTCCTTATTTTTGTCCTGAATGG +
Preference number: 6 (lower is better)
Translates to: PSGAWPPPETQL*VSRSPYFCPEW
Trigger: CCATTCAGGACAAAAATAAGGAGATCGAGAGACTCAAAGCTGAGTTTCAGGAGGAGGCCAAGCGCCGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS TCA 72 bp CTGCTGCATATATCTGCTGACGGTCATCGAAGTCAATaGGGTCCCGAGCTATGGCACTGTCGACAGTCAGCT +
Preference number: 6 (lower is better)
Translates to: LLHISADGHRSQ*GPELWHCRQSA
Trigger: AGCTGACTGTCGACAGTGCCATAGCTCGGGACCTCATTGACTTCGATGACCGTCAGCAGATATATGCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp CTACCAGGACCACCCTGGTGGAGCCATCTGATCCCGTaGTGGTTATTTCTTCCCATTCACATTCCTGCTCAC +
Preference number: 6 (lower is better)
Translates to: LPGPPWWSHLIP*WLFLPIHIPAH
Trigger: GTGAGCAGGAATGTGAATGGGAAGAAATAACCATCACGGGATCAGATGGCTCCACCAGGGTGGTCCTGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 72 bp ATCTCCATACTTCAATTCAGGCTGCACGATGAGCTCTaGTCGCATCAAGCAGTCGGAGCAGTTCTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: ISILQFRLHDEL*SHQAVGAVLQQ
Trigger: CTGCTGCAGAACTGCTCCGACTGCTTGATGCGAGCAGAGCTCATCGTGCAGCCTGAATTGAAGTATGGAGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000683563.1
CDS GCA 72 bp CTGCCCTCGCAGTGCTCTATCTGCCTGCGAATCTTCTaGAGCTCCATCAGCATCCATGTTTCTTGCTTGTCA +
Preference number: 6 (lower is better)
Translates to: LPSQCSICLRIF*SSISIHVSCLS
Trigger: TGACAAGCAAGAAACATGGATGCTGATGGAGCTGCAGAAGATTCGCAGGCAGATAGAGCACTGCGAGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS GCA 72 bp CGCTGCTGCATGACCTGCTTCAGTTCTATCTCCAGATaGTGCTTCTTCTGCATTATCTCAGAGCCACAGGCC +
Preference number: 6 (lower is better)
Translates to: RCCMTCFSSISR*CFFCIISEPQA
Trigger: GGCCTGTGGCTCTGAGATAATGCAGAAGAAGCAGCATCTGGAGATAGAACTGAAGCAGGTCATGCAGCAGCG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 72 bp CCGGAGGTCATCCTCACTCCTCTTCTTAACAATGGATaGCTGCTCCAGCTGCTGGGTCAGGTTGGTGATTTT +
Preference number: 6 (lower is better)
Translates to: PEVILTPLLNNG*LLQLLGQVGDF
Trigger: AAAATCACCAACCTGACCCAGCAGCTGGAGCAGGCATCCATTGTTAAGAAGAGGAGTGAGGATGACCTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 72 bp AGCTCATCCTCCAGCCTCTGCAGCCTTGCCTTGTCTTaGTCCAGGACTTTGATTTTCACCAGAAGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: SSSSSLCSLALS*SRTLIFTRRLS
Trigger: AGAGAGCCTTCTGGTGAAAATCAAAGTCCTGGAGCAAGACAAGGCAAGGCTGCAGAGGCTGGAGGATGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 72 bp TCAACGGTCCACTCACACTCAGTCTGGGTCTCTCGATaGGACCCATATGGGCGCTGTCTGAGTTTATCAATC +
Preference number: 6 (lower is better)
Translates to: STVHSHSVWVSR*DPYGRCLSLSI
Trigger: GATTGATAAACTCAGACAGCGCCCATATGGGTCCCATCGAGAGACCCAGACTGAGTGTGAGTGGACCGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 72 bp AACTTACGGAGAAGGCCTCCTGTTTCTGAGCGATGTTaGTGTTCTTGTCGCTCCAGTCGTACAGCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: NLRRRPPVSERC*CSCRSSRTAAP
Trigger: AGGAGCTGCTGTACGACTGGAGCGACAAGAACACCAACATCGCTCAGAAACAGGAGGCCTTCTCCGTAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506617.1
CDS CAA 72 bp TTAACAATGGATGCCTGCTCCAGCTGCTGGGTCAGGTaGGTGATTTTGATGGCTTGCTCCTTCAGCGACCTC +
Preference number: 6 (lower is better)
Translates to: LTMDACSSCWVR*VILMACSFSDL
Trigger: GAGGTCGCTGAAGGAGCAAGCCATCAAAATCACCAACCTGACCCAGCAGCTGGAGCAGGCATCCATTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 72 bp TCATTAATCAGCCCCTGCAGTTCCAGGGTCCGGTTGTaGCTGATCTGCAGCTGGCTCCTTAGTTCCAAGATG +
Preference number: 6 (lower is better)
Translates to: SLISPCSSRVRL*LICSWLLSSKM
Trigger: CATCTTGGAACTAAGGAGCCAGCTGCAGATCAGCAACAACCGGACCCTGGAACTGCAGGGGCTGATTAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 72 bp GCTGTTTCACCCTGGTTTCTGCCTCTAGAGTTGATTTaGCACGATTCAGCTCATCCTCCAGCCTCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: AVSPWFLPLELI*HDSAHPPASAA
Trigger: GGCTGCAGAGGCTGGAGGATGAGCTGAATCGTGCAAAATCAACTCTAGAGGCAGAAACCAGGGTGAAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp CCAGGCGCTGTTTCACCCTGGTTTCTGCCTCTAGAGTaGATTTTGCACGATTCAGCTCATCCTCCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: PGAVSPWFLPLE*ILHDSAHPPAS
Trigger: AGAGGCTGGAGGATGAGCTGAATCGTGCAAAATCAACTCTAGAGGCAGAAACCAGGGTGAAACAGCGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp GTTGCTAACAGGATCCACTATAAAGCCAGTAGCTGCTaGGGCTTCCAGCAACTCCAGAGCAGTACCAGGTCG +
Preference number: 6 (lower is better)
Translates to: VANRIHYKASSC*GFQQLQSSTRS
Trigger: CGACCTGGTACTGCTCTGGAGTTGCTGGAAGCCCAAGCAGCTACTGGCTTTATAGTGGATCCTGTTAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp GCACAGGTTTGGGCTGTTCAAGAAGCTGCTTACCCTTaGCTGCCTCATCCACCCCAAACATTCACTGGTGAC +
Preference number: 6 (lower is better)
Translates to: AQVWAVQEAAYP*LPHPPQTFTGD
Trigger: GTCACCAGTGAATGTTTGGGGTGGATGAGGCAGCAAAGGGTAAGCAGCTTCTTGAACAGCCCAAACCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683563.1
CDS CAA 90 bp GCCCATCTGCCGCATCTCTCTGATCAAGCTGTCGAGGATTTCCATTaGGTCATTGGCCTGGGCAAAACACTCATCCAATTCTCGACTCCG +
Preference number: 6 (lower is better)
Translates to: AHLPHLSDQAVEDFH*VIGLGKTLIQFSTP
Trigger: CGGAGTCGAGAATTGGATGAGTGTTTTGCCCAGGCCAATGACCAAATGGAAATCCTCGACAGCTTGATCAGAGAGATGCGGCAGATGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000683563.1
CDS CAA 90 bp CCTGCGGACTCGAGGGACACTGATGGCTTTATAAAGGGCTCGCATTaGCTCTTGGAGCTGAAGAAGCCTTTTCTGGTAAGCATCACAGGG +
Preference number: 6 (lower is better)
Translates to: PADSRDTDGFIKGSH*LLELKKPFLVSITG
Trigger: CCCTGTGATGCTTACCAGAAAAGGCTTCTTCAGCTCCAAGAGCAAATGCGAGCCCTTTATAAAGCCATCAGTGTCCCTCGAGTCCGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000683563.1
CDS CAA 90 bp CGGGAGGAGGCTGGCATACCTAAAGTCGATCTGTTTATCTATCCTTaGCCAGCGGTCTGTCAGCTGTGTGACTTTTTCACCGAACTTGCC +
Preference number: 6 (lower is better)
Translates to: REEAGIPKVDLFIYP*PAVCQLCDFFTELA
Trigger: GGCAAGTTCGGTGAAAAAGTCACACAGCTGACAGACCGCTGGCAAAGGATAGATAAACAGATCGACTTTAGGTATGCCAGCCTCCTCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684395.1
CDS TCA 72 bp TTCTTCTGCATTATCTCAGAGCCACAGGCCTTTTGCTaGAGGGCGTTTTCTTCAGCTCGCCTTCGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: FFCIISEPQAFC*RAFSSARLRCS
Trigger: TGAGCAGCGAAGGCGAGCTGAAGAAAACGCCCTTCAGCAAAAGGCCTGTGGCTCTGAGATAATGCAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS TCA 72 bp GCCTCTGCAGCCTTGCCTTGTCTTGCTCCAGGACTTTaGTTTTCACCAGAAGGCTCTCTCTTTCCTGTACCA +
Preference number: 6 (lower is better)
Translates to: ASAALPCLAPGL*FSPEGSLFPVP
Trigger: TGGTACAGGAAAGAGAGAGCCTTCTGGTGAAAATCAAAGTCCTGGAGCAAGACAAGGCAAGGCTGCAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 72 bp AGCCTCAGGTTCCGCAGTTCTTCTTCTAACATCAAGTaGTCCTTGGTCAGGTTCTCTGTGAGAGACTGCAGC +
Preference number: 6 (lower is better)
Translates to: SLRFRSSSSNIK*SLVRFSVRDCS
Trigger: GCTGCAGTCTCTCACAGAGAACCTGACCAAGGAGCACTTGATGTTAGAAGAAGAACTGCGGAACCTGAGGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 72 bp TTCCTTAGGAGAAGCAGATGCTCCAGCGATAGATCCTaGACCCCGAAGGAATGGCTGGATTTCAGAAGCAAC +
Preference number: 6 (lower is better)
Translates to: FLRRSRCSSDRS*TPKEWLDFRSN
Trigger: GTTGCTTCTGAAATCCAGCCATTCCTTCGGGGTGCAGGATCTATCGCTGGAGCATCTGCTTCTCCTAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 72 bp CAAGTTGCTAACAGGATCCACTATAAAGCCAGTAGCTaGTTGGGCTTCCAGCAACTCCAGAGCAGTACCAGG +
Preference number: 6 (lower is better)
Translates to: QVANRIHYKASS*LGFQQLQSSTR
Trigger: CCTGGTACTGCTCTGGAGTTGCTGGAAGCCCAAGCAGCTACTGGCTTTATAGTGGATCCTGTTAGCAACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 72 bp GTTTATAGGACACAAAAGAGCTGGCTAAAGGGCTTCTaGCGTTTCTCTAAGACCCTGGATGGCACCTGGCCT +
Preference number: 6 (lower is better)
Translates to: VYRTQKSWLKGF*RFSKTLDGTWP
Trigger: AGGCCAGGTGCCATCCAGGGTCTTAGAGAAACGGCAGAAGCCCTTTAGCCAGCTCTTTTGTGTCCTATAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684395.1
CDS GCA 72 bp CACAGGTTTGGGCTGTTCAAGAAGCTGCTTACCCTTTaGTGCCTCATCCACCCCAAACATTCACTGGTGACA +
Preference number: 6 (lower is better)
Translates to: HRFGLFKKLLTL*CLIHPKHSLVT
Trigger: TGTCACCAGTGAATGTTTGGGGTGGATGAGGCAGCAAAGGGTAAGCAGCTTCTTGAACAGCCCAAACCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683563.1
CDS CAA 72 bp AAATCATTAATCAGCCCCTGCAGTTCCAGGGTCCGGTaGTTGCTGATCTGCAGCTGGCTCCTTAGTTCCAAG +
Preference number: 6 (lower is better)
Translates to: KSLISPCSSRVR*LLICSWLLSSK
Trigger: CTTGGAACTAAGGAGCCAGCTGCAGATCAGCAACAACCGGACCCTGGAACTGCAGGGGCTGATTAATGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 72 bp AGCCTCTGCAGCCTTGCCTTGTCTTGCTCCAGGACTTaGATTTTCACCAGAAGGCTCTCTCTTTCCTGTACC +
Preference number: 6 (lower is better)
Translates to: SLCSLALSCSRT*IFTRRLSLSCT
Trigger: GGTACAGGAAAGAGAGAGCCTTCTGGTGAAAATCAAAGTCCTGGAGCAAGACAAGGCAAGGCTGCAGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp CTCTATCAATCAGCCCCCGGGCCAAGGCGACATCTTTaGGCAAAAAGACACTGTTCACAGGGTCTACTACAC +
Preference number: 6 (lower is better)
Translates to: LYQSAPGPRRHL*AKRHCSQGLLH
Trigger: GTGTAGTAGACCCTGTGAACAGTGTCTTTTTGCCAAAAGATGTCGCCTTGGCCCGGGGGCTGATTGATAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp GCCGACACCATTTTTCAAGGAGATCATGTCAGCAAATaGAGTGAGGCTGAGGCTGCCGGATCGGTACTGATC +
Preference number: 6 (lower is better)
Translates to: ADTIFQGDHVSK*SEAEAAGSVLI
Trigger: GATCAGTACCGATCCGGCAGCCTCAGCCTCACTCAATTTGCTGACATGATCTCCTTGAAAAATGGTGTCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 90 bp TGCCGCATCTCTCTGATCAAGCTGTCGAGGATTTCCATTTGGTCATaGGCCTGGGCAAAACACTCATCCAATTCTCGACTCCGAGTCAGT +
Preference number: 6 (lower is better)
Translates to: CRISLIKLSRISIWS*AWAKHSSNSRLRVS
Trigger: ACTGACTCGGAGTCGAGAATTGGATGAGTGTTTTGCCCAGGCCAATGACCAAATGGAAATCCTCGACAGCTTGATCAGAGAGATGCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000683563.1
CDS CAA 90 bp TCTCTCTGTAAATCATTAATCAGCCCCTGCAGTTCCAGGGTCCGGTaGTTGCTGATCTGCAGCTGGCTCCTTAGTTCCAAGATGGTTGCA +
Preference number: 6 (lower is better)
Translates to: SLCKSLISPCSSRVR*LLICSWLLSSKMVA
Trigger: TGCAACCATCTTGGAACTAAGGAGCCAGCTGCAGATCAGCAACAACCGGACCCTGGAACTGCAGGGGCTGATTAATGATTTACAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 90 bp GATTTTGCACGATTCAGCTCATCCTCCAGCCTCTGCAGCCTTGCCTaGTCTTGCTCCAGGACTTTGATTTTCACCAGAAGGCTCTCTCTT +
Preference number: 6 (lower is better)
Translates to: DFARFSSSSSLCSLA*SCSRTLIFTRRLSL
Trigger: AAGAGAGAGCCTTCTGGTGAAAATCAAAGTCCTGGAGCAAGACAAGGCAAGGCTGCAGAGGCTGGAGGATGAGCTGAATCGTGCAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 90 bp GCTGCTGGTGCCGACACCATTTTTCAAGGAGATCATGTCAGCAAATaGAGTGAGGCTGAGGCTGCCGGATCGGTACTGATCAAAGAACTT +
Preference number: 6 (lower is better)
Translates to: AAGADTIFQGDHVSK*SEAEAAGSVLIKEL
Trigger: AAGTTCTTTGATCAGTACCGATCCGGCAGCCTCAGCCTCACTCAATTTGCTGACATGATCTCCTTGAAAAATGGTGTCGGCACCAGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp GCCGCATTGTTTTCAGCTTGGCGATTGTCATGGCCCTaGTCTTCTCTATGTCAATCATGCAGTAGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: AALFSAWRLSWP*SSLCQSCSSAR
Trigger: CCTGGCACTACTGCATGATTGACATAGAGAAGATCAGGGCCATGACAATCGCCAAGCTGAAAACAATGCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS TCA 72 bp TCTGCAGCCTCTTGCAGAATCACCCCAGAAGGGGACTaGATCATGGTCCTCTTGATAGGTATGTTCAGCAGA +
Preference number: 6 (lower is better)
Translates to: SAASCRITPEGD*IMVLLIGMFSR
Trigger: TCTGCTGAACATACCTATCAAGAGGACCATGATTCAGTCCCCTTCTGGGGTGATTCTGCAAGAGGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp GCTTATATCTTACGCTCTCCTCTGTTCGCATCTGAGTaGCTTGTCTCAGCTCAACCTCCAGCTGCTGTTTCC +
Preference number: 6 (lower is better)
Translates to: AYILRSPLFASE*LVSAQPPAAVS
Trigger: GGAAACAGCAGCTGGAGGTTGAGCTGAGACAAGTCACTCAGATGCGAACAGAGGAGAGCGTAAGATATAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 72 bp CAGGCTCGCAAGCTTCGCTTTGAACTGGGAACACTCTaGCTGGTATTTCTGCAGGTTCTGATCCAGGAATTT +
Preference number: 6 (lower is better)
Translates to: QARKLRFELGTL*LVFLQVLIQEF
Trigger: AAATTCCTGGATCAGAACCTGCAGAAATACCAGGCAGAGTGTTCCCAGTTCAAAGCGAAGCTTGCGAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 72 bp TTTTCCCTCTCTCTCTGTAAATCATTAATCAGCCCCTaGAGTTCCAGGGTCCGGTTGTTGCTGATCTGCAGC +
Preference number: 6 (lower is better)
Translates to: FSLSLCKSLISP*SSRVRLLLICS
Trigger: GCTGCAGATCAGCAACAACCGGACCCTGGAACTGCAGGGGCTGATTAATGATTTACAGAGAGAGAGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 72 bp CGCCTTCGCTGCTCAGTGGCCTGCAAGATGCTGTCATaGAGCCTGACAATTTCATCCTTCAGATCTCGATTT +
Preference number: 6 (lower is better)
Translates to: RLRCSVACKMLS*SLTISSFRSRF
Trigger: AAATCGAGATCTGAAGGATGAAATTGTCAGGCTCAATGACAGCATCTTGCAGGCCACTGAGCAGCGAAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 72 bp ATATCTTACGCTCTCCTCTGTTCGCATCTGAGTGACTaGTCTCAGCTCAACCTCCAGCTGCTGTTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: ISYALLCSHLSD*SQLNLQLLFPL
Trigger: CAGAGGAAACAGCAGCTGGAGGTTGAGCTGAGACAAGTCACTCAGATGCGAACAGAGGAGAGCGTAAGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 72 bp AGGTTCCGCAGTTCTTCTTCTAACATCAAGTGCTCCTaGGTCAGGTTCTCTGTGAGAGACTGCAGCCTCTCA +
Preference number: 6 (lower is better)
Translates to: RFRSSSSNIKCS*VRFSVRDCSLS
Trigger: TGAGAGGCTGCAGTCTCTCACAGAGAACCTGACCAAGGAGCACTTGATGTTAGAAGAAGAACTGCGGAACCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 90 bp TCTTCAGCTCGCCTTCGCTGCTCAGTGGCCTGCAAGATGCTGTCATaGAGCCTGACAATTTCATCCTTCAGATCTCGATTTTCCCTTGAA +
Preference number: 6 (lower is better)
Translates to: SSARLRCSVACKMLS*SLTISSFRSRFSLE
Trigger: TTCAAGGGAAAATCGAGATCTGAAGGATGAAATTGTCAGGCTCAATGACAGCATCTTGCAGGCCACTGAGCAGCGAAGGCGAGCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 90 bp AGATTGCTTATATCTTACGCTCTCCTCTGTTCGCATCTGAGTGACTaGTCTCAGCTCAACCTCCAGCTGCTGTTTCCTCTGAGACACCTC +
Preference number: 6 (lower is better)
Translates to: RLLISYALLCSHLSD*SQLNLQLLFPLRHL
Trigger: GAGGTGTCTCAGAGGAAACAGCAGCTGGAGGTTGAGCTGAGACAAGTCACTCAGATGCGAACAGAGGAGAGCGTAAGATATAAGCAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 90 bp CTCCTGGGAAACCCTTTCATAGTCGATCCTCAGGCGTGTCAGTTCTaGCTCCTGAACCTTCAGTTTGTTTATTGTCTCCGTCGCACTACT +
Preference number: 6 (lower is better)
Translates to: LLGNPFIVDPQACQF*LLNLQFVYCLRRTT
Trigger: AGTAGTGCGACGGAGACAATAAACAAACTGAAGGTTCAGGAGCAAGAACTGACACGCCTGAGGATCGACTATGAAAGGGTTTCCCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 90 bp CTCTGTAAATCATTAATCAGCCCCTGCAGTTCCAGGGTCCGGTTGTaGCTGATCTGCAGCTGGCTCCTTAGTTCCAAGATGGTTGCATTT +
Preference number: 6 (lower is better)
Translates to: LCKSLISPCSSRVRL*LICSWLLSSKMVAF
Trigger: AAATGCAACCATCTTGGAACTAAGGAGCCAGCTGCAGATCAGCAACAACCGGACCCTGGAACTGCAGGGGCTGATTAATGATTTACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS TCA 72 bp GATTGCTTATATCTTACGCTCTCCTCTGTTCGCATCTaGGTGACTTGTCTCAGCTCAACCTCCAGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: DCLYLTLSSVRI*VTCLSSTSSCC
Trigger: ACAGCAGCTGGAGGTTGAGCTGAGACAAGTCACTCAGATGCGAACAGAGGAGAGCGTAAGATATAAGCAATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS TCA 72 bp CCTTCTGGAAATGCTCATTCCTCAAGTGAGCTTGTTTaGCACTTTCCTGTTCCTGGAGTAACTGCCGCCTCA +
Preference number: 6 (lower is better)
Translates to: PSGNAHSSSELV*HFPVPGVTAAS
Trigger: TGAGGCGGCAGTTACTCCAGGAACAGGAAAGTGTCAAACAAGCTCACTTGAGGAATGAGCATTTCCAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS TCA 72 bp CTTTCTATCTACCAGGACCACCCTGGTGGAGCCATCTaGTCCCGTGATGGTTATTTCTTCCCATTCACATTC +
Preference number: 6 (lower is better)
Translates to: LSIYQDHPGGAI*SRDGYFFPFTF
Trigger: GAATGTGAATGGGAAGAAATAACCATCACGGGATCAGATGGCTCCACCAGGGTGGTCCTGGTAGATAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS GCA 72 bp TGCTGCATGACCTGCTTCAGTTCTATCTCCAGATGCTaGTTCTTCTGCATTATCTCAGAGCCACAGGCCTTT +
Preference number: 6 (lower is better)
Translates to: CCMTCFSSISRC*FFCIISEPQAF
Trigger: AAAGGCCTGTGGCTCTGAGATAATGCAGAAGAAGCAGCATCTGGAGATAGAACTGAAGCAGGTCATGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 72 bp TGTTTTGTCGATCAGCTGACACTCATAGAGCTGCATTaGTGTCACCTTCTTCCTCAGCCCATCAAACACCAG +
Preference number: 6 (lower is better)
Translates to: CFVDQLTLIELH*CHLLPQPIKHQ
Trigger: CTGGTGTTTGATGGGCTGAGGAAGAAGGTGACAGCAATGCAGCTCTATGAGTGTCAGCTGATCGACAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 72 bp TCCGTCGCACTACTGTTTGCTTTCTGCAGGTCATACTaGACCCTTTGTAATCTCGCGTTTTCATCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: SVALLFAFCRSY*TLCNLAFSSSR
Trigger: CCTGGAAGATGAAAACGCGAGATTACAAAGGGTCCAGTATGACCTGCAGAAAGCAAACAGTAGTGCGACGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CCA 72 bp TGCAGTTCCAGGGTCCGGTTGTTGCTGATCTGCAGCTaGCTCCTTAGTTCCAAGATGGTTGCATTTTTATCA +
Preference number: 6 (lower is better)
Translates to: CSSRVRLLLICS*LLSSKMVAFLS
Trigger: TGATAAAAATGCAACCATCTTGGAACTAAGGAGCCAGCTGCAGATCAGCAACAACCGGACCCTGGAACTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CCA 72 bp CCGGTTGCGATCTGTGCTTCTAATAAGCGAATACCGTaGCCCTTTTCGATGAGTTCCTTATTCATGGCTTGG +
Preference number: 6 (lower is better)
Translates to: PVAICASNKRIP*PFSMSSLFMAW
Trigger: CCAAGCCATGAATAAGGAACTCATCGAAAAGGGCCACGGTATTCGCTTATTAGAAGCACAGATCGCAACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp TCGAGGGACACTGATGGCTTTATAAAGGGCTCGCATTaGCTCTTGGAGCTGAAGAAGCCTTTTCTGGTAAGC +
Preference number: 6 (lower is better)
Translates to: SRDTDGFIKGSH*LLELKKPFLVS
Trigger: GCTTACCAGAAAAGGCTTCTTCAGCTCCAAGAGCAAATGCGAGCCCTTTATAAAGCCATCAGTGTCCCTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000683563.1
CDS CAA 90 bp ATTGGCCTGGGCAAAACACTCATCCAATTCTCGACTCCGAGTCAGTaGTATTCCATCTCCATACTTCAATTCAGGCTGCACGATGAGCTC +
Preference number: 6 (lower is better)
Translates to: IGLGKTLIQFSTPSQ*YSISILQFRLHDEL
Trigger: GAGCTCATCGTGCAGCCTGAATTGAAGTATGGAGATGGAATACAACTGACTCGGAGTCGAGAATTGGATGAGTGTTTTGCCCAGGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000683563.1
CDS CAA 90 bp TCCTCAGGCGTGTCAGTTCTTGCTCCTGAACCTTCAGTTTGTTTATaGTCTCCGTCGCACTACTGTTTGCTTTCTGCAGGTCATACTGGA +
Preference number: 6 (lower is better)
Translates to: SSGVSVLAPEPSVCL*SPSHYCLLSAGHTG
Trigger: TCCAGTATGACCTGCAGAAAGCAAACAGTAGTGCGACGGAGACAATAAACAAACTGAAGGTTCAGGAGCAAGAACTGACACGCCTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 90 bp TCCAGCCTCAGGTTCCGCAGTTCTTCTTCTAACATCAAGTGCTCCTaGGTCAGGTTCTCTGTGAGAGACTGCAGCCTCTCAATTTCTATT +
Preference number: 6 (lower is better)
Translates to: SSLRFRSSSSNIKCS*VRFSVRDCSLSISI
Trigger: AATAGAAATTGAGAGGCTGCAGTCTCTCACAGAGAACCTGACCAAGGAGCACTTGATGTTAGAAGAAGAACTGCGGAACCTGAGGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 90 bp CTCCAGCTTACGCCTGCACCTCTCTTCAATTCTCTTGATCTCTGCTaGGAGTCTTTCGATCTCACTCCTAAGACTGTTCTTCTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: LQLTPAPLFNSLDLC*ESFDLTPKTVLLSL
Trigger: GAGAGAGAGAAGAACAGTCTTAGGAGTGAGATCGAAAGACTCCAAGCAGAGATCAAGAGAATTGAAGAGAGGTGCAGGCGTAAGCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 90 bp CTGGTAGAATCCTCCAGCTTACGCCTGCACCTCTCTTCAATTCTCTaGATCTCTGCTTGGAGTCTTTCGATCTCACTCCTAAGACTGTTC +
Preference number: 6 (lower is better)
Translates to: LVESSSLRLHLSSIL*ISAWSLSISLLRLF
Trigger: GAACAGTCTTAGGAGTGAGATCGAAAGACTCCAAGCAGAGATCAAGAGAATTGAAGAGAGGTGCAGGCGTAAGCTGGAGGATTCTACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 90 bp TCCTGCAGTAGAACCCTCAACCTTTCAATCTCGTACTCCTTCTCCTaGATGGCTTTCTCAGACTCTAATTTCTGCCAACCAAGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: SCSRTLNLSISYSFS*MAFSDSNFCQPRFS
Trigger: GGAGAACCTTGGTTGGCAGAAATTAGAGTCTGAGAAAGCCATCAAGGAGAAGGAGTACGAGATTGAAAGGTTGAGGGTTCTACTGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp CTTTATCCAGGTCCAGGCAGACAGTTTCCTCCTCAGTaGGCCTGGCTTCATAAACCTTTAACATGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: LYPGPGRQFPPQ*AWLHKPLTCLL
Trigger: CAGAAGACATGTTAAAGGTTTATGAAGCCAGGCTCACTGAGGAGGAAACTGTCTGCCTGGACCTGGATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS TCA 72 bp GTTTATCTATCCTTTGCCAGCGGTCTGTCAGCTGTGTaGCTTTTTCACCGAACTTGCCCAAGTCCAGATCAT +
Preference number: 6 (lower is better)
Translates to: VYLSFASGLSAV*LFHRTCPSPDH
Trigger: ATGATCTGGACTTGGGCAAGTTCGGTGAAAAAGTCACACAGCTGACAGACCGCTGGCAAAGGATAGATAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS TCA 72 bp CCATATGGGCGCTGTCTGAGTTTATCAATCTCCCTCTaGTATCGGGAGCGTTCTGTTTCTAACTGTGACTGT +
Preference number: 6 (lower is better)
Translates to: PYGRCLSLSISL*YRERSVSNCDC
Trigger: ACAGTCACAGTTAGAAACAGAACGCTCCCGATATCAGAGGGAGATTGATAAACTCAGACAGCGCCCATATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 72 bp TTTGCTGTTTCTCACACTCCAGGCGCTGTTTCACCCTaGTTTCTGCCTCTAGAGTTGATTTTGCACGATTCA +
Preference number: 6 (lower is better)
Translates to: FAVSHTPGAVSP*FLPLELILHDS
Trigger: TGAATCGTGCAAAATCAACTCTAGAGGCAGAAACCAGGGTGAAACAGCGCCTGGAGTGTGAGAAACAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 72 bp CGCCTGCACCTCTCTTCAATTCTCTTGATCTCTGCTTaGAGTCTTTCGATCTCACTCCTAAGACTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: RLHLSSILLISA*SLSISLLRLFF
Trigger: GAAGAACAGTCTTAGGAGTGAGATCGAAAGACTCCAAGCAGAGATCAAGAGAATTGAAGAGAGGTGCAGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 72 bp GTCTCATTGTATATGCCTGCTATGCAGCTTGAACCCTaGAGGAAGTCCTTAATTCTCTCACCAACCTCGTCA +
Preference number: 6 (lower is better)
Translates to: VSLYMPAMQLEP*RKSLILSPTSS
Trigger: TGACGAGGTTGGTGAGAGAATTAAGGACTTCCTCCAGGGTTCAAGCTGCATAGCAGGCATATACAATGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 72 bp GTAGGCCTCCTGAACAGACATTTCTTTATTGGTTTCTaGGTCAACTATGACCACTCTACGCTTCCTGAGGGT +
Preference number: 6 (lower is better)
Translates to: VGLLNRHFFIGF*VNYDHSTLPEG
Trigger: ACCCTCAGGAAGCGTAGAGTGGTCATAGTTGACCCAGAAACCAATAAAGAAATGTCTGTTCAGGAGGCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp TCTCTGATCAAGCTGTCGAGGATTTCCATTTGGTCATaGGCCTGGGCAAAACACTCATCCAATTCTCGACTC +
Preference number: 6 (lower is better)
Translates to: SLIKLSRISIWS*AWAKHSSNSRL
Trigger: GAGTCGAGAATTGGATGAGTGTTTTGCCCAGGCCAATGACCAAATGGAAATCCTCGACAGCTTGATCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000683563.1
CDS CAA 72 bp GCTGGCATACCTAAAGTCGATCTGTTTATCTATCCTTaGCCAGCGGTCTGTCAGCTGTGTGACTTTTTCACC +
Preference number: 6 (lower is better)
Translates to: AGIPKVDLFIYP*PAVCQLCDFFT
Trigger: GGTGAAAAAGTCACACAGCTGACAGACCGCTGGCAAAGGATAGATAAACAGATCGACTTTAGGTATGCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684395.1
CDS TCA 72 bp TCTCCAGATCTTGTAAGTAGTTCAATGTACCGAGCATaGACATCTGCAGCCTCTTGCAGAATCACCCCAGAA +
Preference number: 6 (lower is better)
Translates to: SPDLVSSSMYRA*TSAASCRITPE
Trigger: TTCTGGGGTGATTCTGCAAGAGGCTGCAGATGTTCATGCTCGGTACATTGAACTACTTACAAGATCTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp AAACCAGTGATAGCTTTTTCTGCTGCATATATCTGCTaGCGGTCATCGAAGTCAATGAGGTCCCGAGCTATG +
Preference number: 6 (lower is better)
Translates to: KPVIAFSAAYIC*RSSKSMRSRAM
Trigger: CATAGCTCGGGACCTCATTGACTTCGATGACCGTCAGCAGATATATGCAGCAGAAAAAGCTATCACTGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp CACAAATTCGTCGGCAGGAAACATGAGAACCTTTCATaGCAACACTCTCCAGAAGCTATGCAGGCAGGAATT +
Preference number: 6 (lower is better)
Translates to: HKFVGRKHENLS*QHSPEAMQAGI
Trigger: AATTCCTGCCTGCATAGCTTCTGGAGAGTGTTGTCATGAAAGGTTCTCATGTTTCCTGCCGACGAATTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682228.1
CDS GCA 72 bp CTTACGCCTGCACCTCTCTTCAATTCTCTTGATCTCTaGTTGGAGTCTTTCGATCTCACTCCTAAGACTGTT +
Preference number: 6 (lower is better)
Translates to: LTPAPLFNSLDL*LESFDLTPKTV
Trigger: AACAGTCTTAGGAGTGAGATCGAAAGACTCCAAGCAGAGATCAAGAGAATTGAAGAGAGGTGCAGGCGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp GGCAAAACACTCATCCAATTCTCGACTCCGAGTCAGTaGTATTCCATCTCCATACTTCAATTCAGGCTGCAC +
Preference number: 6 (lower is better)
Translates to: GKTLIQFSTPSQ*YSISILQFRLH
Trigger: GTGCAGCCTGAATTGAAGTATGGAGATGGAATACAACTGACTCGGAGTCGAGAATTGGATGAGTGTTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000683563.1
CDS CAA 72 bp GTGTCAGTTCTTGCTCCTGAACCTTCAGTTTGTTTATaGTCTCCGTCGCACTACTGTTTGCTTTCTGCAGGT +
Preference number: 6 (lower is better)
Translates to: VSVLAPEPSVCL*SPSHYCLLSAG
Trigger: ACCTGCAGAAAGCAAACAGTAGTGCGACGGAGACAATAAACAAACTGAAGGTTCAGGAGCAAGAACTGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 72 bp AACCCTTTCATAGTCGATCCTCAGGCGTGTCAGTTCTaGCTCCTGAACCTTCAGTTTGTTTATTGTCTCCGT +
Preference number: 6 (lower is better)
Translates to: NPFIVDPQACQF*LLNLQFVYCLR
Trigger: ACGGAGACAATAAACAAACTGAAGGTTCAGGAGCAAGAACTGACACGCCTGAGGATCGACTATGAAAGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 72 bp ACGCCTGCACCTCTCTTCAATTCTCTTGATCTCTGCTaGGAGTCTTTCGATCTCACTCCTAAGACTGTTCTT +
Preference number: 6 (lower is better)
Translates to: TPAPLFNSLDLC*ESFDLTPKTVL
Trigger: AAGAACAGTCTTAGGAGTGAGATCGAAAGACTCCAAGCAGAGATCAAGAGAATTGAAGAGAGGTGCAGGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp CCACTGACTTCTTCCCCTTCAATAGTTTGTCCAAGGTaGTTTTGTCGATCAGCTGACACTCATAGAGCTGCA +
Preference number: 6 (lower is better)
Translates to: PLTSSPSIVCPR*FCRSADTHRAA
Trigger: TGCAGCTCTATGAGTGTCAGCTGATCGACAAAACAACCTTGGACAAACTATTGAAGGGGAAGAAGTCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 90 bp TCACTGTGCAAGTTCTTCTGCTCATTCAAAAACCGCATGACTGTGTaGGAATCTCCAAATTTCATGGATTCTAAGGAATCCTGGCGGCGT +
Preference number: 6 (lower is better)
Translates to: SLCKFFCSFKNRMTV*ESPNFMDSKESWRR
Trigger: ACGCCGCCAGGATTCCTTAGAATCCATGAAATTTGGAGATTCCAACACAGTCATGCGGTTTTTGAATGAGCAGAAGAACTTGCACAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 90 bp CTGCCAACCAAGGTTCTCCTTTTCACATTGCCTTGCTTTCTGCAGTaGGTCATAGTCATTCTTCTGTTGGTCAAATCTGTCTTCCACAGA +
Preference number: 6 (lower is better)
Translates to: LPTKVLLFTLPCFLQ*VIVILLLVKSVFHR
Trigger: TCTGTGGAAGACAGATTTGACCAACAGAAGAATGACTATGACCAACTGCAGAAAGCAAGGCAATGTGAAAAGGAGAACCTTGGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 90 bp CAACTTCTTCCACTGACTTCTTCCCCTTCAATAGTTTGTCCAAGGTaGTTTTGTCGATCAGCTGACACTCATAGAGCTGCATTGCTGTCA +
Preference number: 6 (lower is better)
Translates to: QLLPLTSSPSIVCPR*FCRSADTHRAALLS
Trigger: TGACAGCAATGCAGCTCTATGAGTGTCAGCTGATCGACAAAACAACCTTGGACAAACTATTGAAGGGGAAGAAGTCAGTGGAAGAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 90 bp GGACTAAGCCAATTTTCATGGCCTCATAAATGCCAAGCTTCTGTTTaGTGGTCTCATTGTATATGCCTGCTATGCAGCTTGAACCCTGGA +
Preference number: 6 (lower is better)
Translates to: GLSQFSWPHKCQASV*WSHCICLLCSLNPG
Trigger: TCCAGGGTTCAAGCTGCATAGCAGGCATATACAATGAGACCACAAAACAGAAGCTTGGCATTTATGAGGCCATGAAAATTGGCTTAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp TATTACAGTTTTCCGAGTTGGCATCTCGGGCCAGTCTaGGCTCCTCTTCCAAAACTTCGATCTTGGTATTTT +
Preference number: 6 (lower is better)
Translates to: YYSFPSWHLGPV*APLPKLRSWYF
Trigger: AAAATACCAAGATCGAAGTTTTGGAAGAGGAGCTCAGACTGGCCCGAGATGCCAACTCGGAAAACTGTAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp TCTGATTCCTTGGAAGGACATGCTTCTCTTCTGTACTaGAAGCAAGAGCAGACCAGTATGTGGTTCGATTCT +
Preference number: 6 (lower is better)
Translates to: SDSLEGHASLLY*KQEQTSMWFDS
Trigger: AGAATCGAACCACATACTGGTCTGCTCTTGCTTTCAGTACAGAAGAGAAGCATGTCCTTCCAAGGAATCAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp TTTTGTGGTCTCATTGTATATGCCTGCTATGCAGCTTaGACCCTGGAGGAAGTCCTTAATTCTCTCACCAAC +
Preference number: 6 (lower is better)
Translates to: FCGLIVYACYAA*TLEEVLNSLTN
Trigger: GTTGGTGAGAGAATTAAGGACTTCCTCCAGGGTTCAAGCTGCATAGCAGGCATATACAATGAGACCACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp TCCTTCCAACATTATTTTGCTTCACTCCCACACTGGTaGCGTGATGGTTGCACAATGAGACAACTGAGACTT +
Preference number: 6 (lower is better)
Translates to: SFQHYFASLPHW*RDGCTMRQLRL
Trigger: AAGTCTCAGTTGTCTCATTGTGCAACCATCACGTCACCAGTGTGGGAGTGAAGCAAAATAATGTTGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683563.1
CDS GCA 72 bp TTGTTTATTGTCTCCGTCGCACTACTGTTTGCTTTCTaGAGGTCATACTGGACCCTTTGTAATCTCGCGTTT +
Preference number: 6 (lower is better)
Translates to: LFIVSVALLFAF*RSYWTLCNLAF
Trigger: AAACGCGAGATTACAAAGGGTCCAGTATGACCTGCAGAAAGCAAACAGTAGTGCGACGGAGACAATAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS GCA 72 bp GGCGTGCATTGTACAATAATACTAATCAGAGCCAACTaGATCCAAGGCATGTGTTTTATCTCCCTGATCAGG +
Preference number: 6 (lower is better)
Translates to: GVHCTIILIRAN*IQGMCFISLIR
Trigger: CCTGATCAGGGAGATAAAACACATGCCTTGGATGCAGTTGGCTCTGATTAGTATTATTGTACAATGCACGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682228.1
CDS CAA 90 bp CTCCTTGTTTTTATCCTGGATGGTTTTGGCAGCATCATCAAGAGATaGCTTATATCTTACGCTCTCCTCTGTTCGCATCTGAGTGACTTG +
Preference number: 6 (lower is better)
Translates to: LLVFILDGFGSIIKR*LISYALLCSHLSDL
Trigger: CAAGTCACTCAGATGCGAACAGAGGAGAGCGTAAGATATAAGCAATCTCTTGATGATGCTGCCAAAACCATCCAGGATAAAAACAAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 90 bp CTGATCAAAGAACTTCCTGTCAACAAGGCCCTTGTCAATAGCATCTaGAATATCATACTGACTGCCTGTCTTTCTATCTACCAGGACCAC +
Preference number: 6 (lower is better)
Translates to: LIKELPVNKALVNSI*NIILTACLSIYQDH
Trigger: GTGGTCCTGGTAGATAGAAAGACAGGCAGTCAGTATGATATTCAAGATGCTATTGACAAGGGCCTTGTTGACAGGAAGTTCTTTGATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp CTTCTAACATCAAGTGCTCCTTGGTCAGGTTCTCTGTaGGAGACTGCAGCCTCTCAATTTCTATTTTGCTTT +
Preference number: 6 (lower is better)
Translates to: LLTSSAPWSGSL*ETAASQFLFCF
Trigger: AAAGCAAAATAGAAATTGAGAGGCTGCAGTCTCTCACAGAGAACCTGACCAAGGAGCACTTGATGTTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS TCA 72 bp ATTCCTGACGCTGGATATGGTGGAAATCTTACTTACTaGTTCATGTCGGGAGCTGCTAAAAACATCATCGCT +
Preference number: 6 (lower is better)
Translates to: IPDAGYGGNLTY*FMSGAAKNIIA
Trigger: AGCGATGATGTTTTTAGCAGCTCCCGACATGAATCAGTAAGTAAGATTTCCACCATATCCAGCGTCAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp TGTAAACATTTGTTGGGAGGGGGACGGGGAACTGTCTaGAAGCTGGTTCTCATTGTTAAACCAACATTACAA +
Preference number: 6 (lower is better)
Translates to: CKHLLGGGRGTV*KLVLIVKPTLQ
Trigger: TTGTAATGTTGGTTTAACAATGAGAACCAGCTTTCAGACAGTTCCCCGTCCCCCTCCCAACAAATGTTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683682.1
CDS CAA 72 bp GAACCTCTGAAGTTGGCAAGCATATCTTTAAGCTGGTaGAGAACCTCAGCAATTGCTTGTGAATCATTCTGC +
Preference number: 6 (lower is better)
Translates to: EPLKLASISLSW*RTSAIACESFC
Trigger: GCAGAATGATTCACAAGCAATTGCTGAGGTTCTCAACCAGCTTAAAGATATGCTTGCCAACTTCAGAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS CAA 72 bp TTTATCCTGGATGGTTTTGGCAGCATCATCAAGAGATaGCTTATATCTTACGCTCTCCTCTGTTCGCATCTG +
Preference number: 6 (lower is better)
Translates to: FILDGFGSIIKR*LISYALLCSHL
Trigger: CAGATGCGAACAGAGGAGAGCGTAAGATATAAGCAATCTCTTGATGATGCTGCCAAAACCATCCAGGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 90 bp CAGACTCTAATTTCTGCCAACCAAGGTTCTCCTTTTCACATTGCCTaGCTTTCTGCAGTTGGTCATAGTCATTCTTCTGTTGGTCAAATC +
Preference number: 6 (lower is better)
Translates to: QTLISANQGSPFHIA*LSAVGHSHSSVGQI
Trigger: GATTTGACCAACAGAAGAATGACTATGACCAACTGCAGAAAGCAAGGCAATGTGAAAAGGAGAACCTTGGTTGGCAGAAATTAGAGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 90 bp TCCAGAAGCATGACTGTGGATTCTGGGCTGATTAATTTCTTTCTCTaGGCCTCTACCAAAGAGTATTTTTCCTTAGGAGAAGCAGATGCT +
Preference number: 6 (lower is better)
Translates to: SRSMTVDSGLINFFL*ASTKEYFSLGEADA
Trigger: AGCATCTGCTTCTCCTAAGGAAAAATACTCTTTGGTAGAGGCCAAGAGAAAGAAATTAATCAGCCCAGAATCCACAGTCATGCTTCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CCA 72 bp TCAGAACCTCTGAAGTTGGCAAGCATATCTTTAAGCTaGTTGAGAACCTCAGCAATTGCTTGTGAATCATTC +
Preference number: 6 (lower is better)
Translates to: SEPLKLASISLS*LRTSAIACESF
Trigger: GAATGATTCACAAGCAATTGCTGAGGTTCTCAACCAGCTTAAAGATATGCTTGCCAACTTCAGAGGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS CCA 72 bp TTTTCATGGCCTCATAAATGCCAAGCTTCTGTTTTGTaGTCTCATTGTATATGCCTGCTATGCAGCTTGAAC +
Preference number: 6 (lower is better)
Translates to: FSWPHKCQASVL*SHCICLLCSLN
Trigger: GTTCAAGCTGCATAGCAGGCATATACAATGAGACCACAAAACAGAAGCTTGGCATTTATGAGGCCATGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp AAGGTTCTCCTTTTCACATTGCCTTGCTTTCTGCAGTaGGTCATAGTCATTCTTCTGTTGGTCAAATCTGTC +
Preference number: 6 (lower is better)
Translates to: KVLLFTLPCFLQ*VIVILLLVKSV
Trigger: GACAGATTTGACCAACAGAAGAATGACTATGACCAACTGCAGAAAGCAAGGCAATGTGAAAAGGAGAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp CAATTTTCATGGCCTCATAAATGCCAAGCTTCTGTTTaGTGGTCTCATTGTATATGCCTGCTATGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: QFSWPHKCQASV*WSHCICLLCSL
Trigger: CAAGCTGCATAGCAGGCATATACAATGAGACCACAAAACAGAAGCTTGGCATTTATGAGGCCATGAAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 72 bp GAACTTCCTGTCAACAAGGCCCTTGTCAATAGCATCTaGAATATCATACTGACTGCCTGTCTTTCTATCTAC +
Preference number: 6 (lower is better)
Translates to: ELPVNKALVNSI*NIILTACLSIY
Trigger: GTAGATAGAAAGACAGGCAGTCAGTATGATATTCAAGATGCTATTGACAAGGGCCTTGTTGACAGGAAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS CAA 90 bp TACTTTTCAGAACCTCTGAAGTTGGCAAGCATATCTTTAAGCTGGTaGAGAACCTCAGCAATTGCTTGTGAATCATTCTGCACACTCTTA +
Preference number: 6 (lower is better)
Translates to: YFSEPLKLASISLSW*RTSAIACESFCTLL
Trigger: TAAGAGTGTGCAGAATGATTCACAAGCAATTGCTGAGGTTCTCAACCAGCTTAAAGATATGCTTGCCAACTTCAGAGGTTCTGAAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS TCA 72 bp CACTGTGCAAGTTCTTCTGCTCATTCAAAAACCGCATaGCTGTGTTGGAATCTCCAAATTTCATGGATTCTA +
Preference number: 6 (lower is better)
Translates to: HCASSSAHSKTA*LCWNLQISWIL
Trigger: TAGAATCCATGAAATTTGGAGATTCCAACACAGTCATGCGGTTTTTGAATGAGCAGAAGAACTTGCACAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp TCCATGTATTCTCATCATTTAGTTCCCACTCCTAAGTaGGAACATGTGGTATTTGGTTTTCTGTTCCCGCAT +
Preference number: 6 (lower is better)
Translates to: SMYSHHLVPTPK*EHVVFGFLFPH
Trigger: ATGCGGGAACAGAAAACCAAATACCACATGTTCTCACTTAGGAGTGGGAACTAAATGATGAGAATACATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506617.1
CDS CAA 90 bp TATCTGCCTGCGAATCTTCTGCAGCTCCATCAGCATCCATGTTTCTaGCTTGTCATTTTCTCTGTTGGTTTCAATTACTTTATTATGGTT +
Preference number: 6 (lower is better)
Translates to: YLPANLLQLHQHPCF*LVIFSVGFNYFIMV
Trigger: AACCATAATAAAGTAATTGAAACCAACAGAGAAAATGACAAGCAAGAAACATGGATGCTGATGGAGCTGCAGAAGATTCGCAGGCAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS TCA 72 bp ACAATCTTCTTAGACTTGTTTACCAAGTTCTGCACCTaGCGCTTGTATTCAAGGATTTTCTCTCGTTCTTTC +
Preference number: 6 (lower is better)
Translates to: TIFLDLFTKFCT*RLYSRIFSRSF
Trigger: GAAAGAACGAGAGAAAATCCTTGAATACAAGCGTCAGGTGCAGAACTTGGTAAACAAGTCTAAGAAGATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp TGTCTGAAAAAGAGCTGCTCCTTATGGTTAAATTCCTaGCGCTGGATATGGTGGAAATCTTACTTACTGATT +
Preference number: 6 (lower is better)
Translates to: CLKKSCSLWLNS*RWIWWKSYLLI
Trigger: AATCAGTAAGTAAGATTTCCACCATATCCAGCGTCAGGAATTTAACCATAAGGAGCAGCTCTTTTTCAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379802.8
ENST00000418664.2
CDS TCA 72 bp AAACAGATGAGGTCAGTTGCCACTCACATAGAACAATaGAGTTATTTAGCACATAAACTCCCACAACAGATC +
Preference number: 6 (lower is better)
Translates to: KQMRSVATHIEQ*SYLAHKLPQQI
Trigger: GATCTGTTGTGGGAGTTTATGTGCTAAATAACTTCATTGTTCTATGTGAGTGGCAACTGACCTCATCTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683563.1
CDS CCA 72 bp ACCTTTCTATCTCCTTGTTTTTATCCTGGATGGTTTTaGCAGCATCATCAAGAGATTGCTTATATCTTACGC +
Preference number: 6 (lower is better)
Translates to: TFLSPCFYPGWF*QHHQEIAYILR
Trigger: GCGTAAGATATAAGCAATCTCTTGATGATGCTGCCAAAACCATCCAGGATAAAAACAAGGAGATAGAAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS TCA 72 bp ATCTTTAAGCTGGTTGAGAACCTCAGCAATTGCTTGTaGATCATTCTGCACACTCTTAAGCTCGTTAATTTT +
Preference number: 6 (lower is better)
Translates to: IFKLVENLSNCL*IILHTLKLVNF
Trigger: AAAATTAACGAGCTTAAGAGTGTGCAGAATGATTCACAAGCAATTGCTGAGGTTCTCAACCAGCTTAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379802.8
ENST00000418664.2
ENST00000684395.1
CDS GCA 72 bp ACTATTTGTAGGACTGATGGCAAGGTTGCAAATCTATaGTACTCTGCACTCAAAATCAATGAAGAGGATTTA +
Preference number: 6 (lower is better)
Translates to: TICRTDGKVANL*YSALKINEEDL
Trigger: TAAATCCTCTTCATTGATTTTGAGTGCAGAGTAGCATAGATTTGCAACCTTGCCATCAGTCCTACAAATAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682228.1
CDS CAA 72 bp TCCCTTGAAAGTCTATCAAGCTGGTTTCTAAGATTTTaGGAATCATCCTCTTTTTGCATGGATATCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SLESLSSWFLRF*ESSSFCMDISL
Trigger: CAAGGAGATATCCATGCAAAAAGAGGATGATTCCAAAAATCTTAGAAACCAGCTTGATAGACTTTCAAGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 72 bp AACCTTTCTATCTCCTTGTTTTTATCCTGGATGGTTTaGGCAGCATCATCAAGAGATTGCTTATATCTTACG +
Preference number: 6 (lower is better)
Translates to: NLSISLFLSWMV*AASSRDCLYLT
Trigger: CGTAAGATATAAGCAATCTCTTGATGATGCTGCCAAAACCATCCAGGATAAAAACAAGGAGATAGAAAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CAA 72 bp TTTTCATCTTCCAGGCATTTCCGGTCATTTGTTTCTTaGTCGATCAGTTGTTTTAACCTTTCTATCTCCTTG +
Preference number: 6 (lower is better)
Translates to: FSSSRHFRSFVS*SISCFNLSISL
Trigger: CAAGGAGATAGAAAGGTTAAAACAACTGATCGACAAAGAAACAAATGACCGGAAATGCCTGGAAGATGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379802.8
CDS CCA 72 bp AGAATCAATTCTGAAAATTTAGTGCACGAAGAACACTaGCTATATAGCATTCAGAGAAATGGTTCTGAAACC +
Preference number: 6 (lower is better)
Translates to: RINSENLVHEEH*LYSIQRNGSET
Trigger: GGTTTCAGAACCATTTCTCTGAATGCTATATAGCCAGTGTTCTTCGTGCACTAAATTTTCAGAATTGATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684395.1
CDS CAA 72 bp AAGCAAGAATGTATTATAGCTGATCTAGACAGAAATTaGGCATTTGAGCGTATGCATCTTGTTTTCTTCGAT +
Preference number: 6 (lower is better)
Translates to: KQECIIADLDRN*AFERMHLVFFD
Trigger: ATCGAAGAAAACAAGATGCATACGCTCAAATGCCAAATTTCTGTCTAGATCAGCTATAATACATTCTTGCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683563.1
CDS CAA 72 bp AAGAAAACTTTAGGAGATATGACATTTCAAACTAATTaGATTGGAAGGCTGTTTTGCCCATCATTGTGGATC +
Preference number: 6 (lower is better)
Translates to: KKTLGDMTFQTN*IGRLFCPSLWI
Trigger: GATCCACAATGATGGGCAAAACAGCCTTCCAATCAAATTAGTTTGAAATGTCATATCTCCTAAAGTTTTCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683563.1