RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DSG4 (Homo sapiens)

Ensembl gene IDs: ENSG00000175065

Ensembl transcript IDs: ENST00000308128.9, ENST00000359747.4

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATaGGTTATGTGCTATTCGTTAGACAGTATCAAGGGATGCAATACA +
Preference number: 1 (lower is better)
Translates to: TRLVLQASRPIGFTI*VMCYSLDSIKGCNT
Trigger: TGTATTGCATCCCTTGATACTGTCTAACGAATAGCACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
3UTR-3UTR GCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGAAGGCTTATCTAAAGTaGCTAGCCATATTCACCCTC +
Preference number: 2 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKKAYLK*LAIFTL
Trigger: GAGGGTGAATATGGCTAGGCACTTTAGATAAGCCTT...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
3UTR-3UTR CCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCCTTGGTTTACAAGATTaGTTCTACAGGCCTCAAGAC +
Preference number: 2 (lower is better)
Translates to: NHFQPCFQLANSFLIILSLGLQD*FYRPQD
Trigger: GTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAG...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
3UTR-3UTR CCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCTTGGTTTACAAGATTaGTTCTACAGGCCTCAAGAC +
Preference number: 2 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKLGLQD*FYRPQD
Trigger: GTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAG...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
3UTR-3UTR GCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCGACAGTATCAAGGGATaGAATACATTTTCTGCACAT +
Preference number: 2 (lower is better)
Translates to: NHFQPCFQLANSFLIILSDSIKG*NTFSAH
Trigger: ATGTGCAGAAAATGTATTGCATCCCTTGATACTGTC...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
3UTR-3UTR CCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCAAGAACAAGGCATCTTaGTTTACAAGATTGGTTCTA +
Preference number: 2 (lower is better)
Translates to: NHFQPCFQLANSFLIILSKNKAS*FTRLVL
Trigger: TAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTT...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
3UTR CCA 72 bp AGGGCTTCTTTTGTAACTTCCAAGAACAAGGCATCTTaGTTTACAAGATTGGTTCTACAGGCCTCAAGACCC +
Preference number: 3 (lower is better)
Translates to: RASFVTSKNKAS*FTRLVLQASRP
Trigger: GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGAAGTTACAAAAGAAGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
3UTR-3UTR CAA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTTTTTGGTGGATGTATaGATGATTACAAGGTGCAAG +
Preference number: 3 (lower is better)
Translates to: SKNKASWFTRLVLQASRPFLVDV*MITRCK
Trigger: CTTGCACCTTGTAATCATCAATACATCCACCAAAAA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
3UTR TCA 72 bp GTTCTACAGGCCTCAAGACCCATAGGATTCACAATATaGGTTATGTGCTATTCGTTAGACAGTATCAAGGGA +
Preference number: 3 (lower is better)
Translates to: VLQASRPIGFTI*VMCYSLDSIKG
Trigger: TCCCTTGATACTGTCTAACGAATAGCACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
3UTR-3UTR CAA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGTCTTGGTTTACAAGATaGGTTCTACAGGCCTCAAGA +
Preference number: 3 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKSWFTR*VLQASR
Trigger: TCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGA...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
3UTR-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCTCTTGGTTTACAAGATaGGTTCTACAGGCCTCAAGA +
Preference number: 3 (lower is better)
Translates to: NHFQPCFQLANSFLIILSSWFTR*VLQASR
Trigger: TCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGA...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
3UTR-3UTR CAA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCAAGAACAAGGCATCTaGGTTTACAAGATTGGTTCT +
Preference number: 3 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKQEQGI*VYKIGS
Trigger: AGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTG...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
3UTR-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCTTTTTGGTGGATGTATaGATGATTACAAGGTGCAAG +
Preference number: 3 (lower is better)
Translates to: NHFQPCFQLANSFLIILSFLVDV*MITRCK
Trigger: CTTGCACCTTGTAATCATCAATACATCCACCAAAAA...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
3UTR CCA 72 bp TATATGAATAACTACAGAGTGCTTTTGGAGAATATCTaGTTGCCAATTGAAAGCTCTACGATTCAGGTCAAT +
Preference number: 3 (lower is better)
Translates to: YMNNYRVLLENI*LPIESSTIQVN
Trigger: ATTGACCTGAATCGTAGAGCTTTCAATTGGCAACCAGATATTCTCCAAAAGCACTCTGTAGTTATTCATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCCACCTCCTTCCACCGTaGCCCCGGCTGCATAGGTGT +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPHLLPP*PRLHRC
Trigger: ACACCTATGCAGCCGGGGGCACGGTGGAAGGAGGTG...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCATCTGCCTAAAACGCTaGCGCCGCCGTCTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPICLKR*RRRLRC
Trigger: GCACCGCAGACGGCGGCGGCAGCGTTTTAGGCAGAT...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS-3UTR GCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACGGCTCCTGCGGCCCCTaGGGCCATGAGGCCAACGGC +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYGSCGP*GHEANG
Trigger: GCCGTTGGCCTCATGGCCGCAGGGGCCGCAGGAGCC...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACCGCCGCCGTCTGCGGTaGCACCACCACCCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYRRRLR*HHHPAR
Trigger: CCTTGCCGGGTGGTGGTGGCACCGCAGACGGCGGCG...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS-3UTR GCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTGTCCTCTGTGTAGATaGCCGCGGCACCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPCPLCR*PRHQSP
Trigger: TGGACTCTGGTGCCGCGGGCATCTACACAGAGGACA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGGGCTCCTGCGGCCCCTaGGGCCATGAGGCCAACGGC +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKGSCGP*GHEANG
Trigger: GCCGTTGGCCTCATGGCCGCAGGGGCCGCAGGAGCC...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTGTGTCGAGATGTCATaGGGGATGTGGAGCCAACGG +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPCVEMS*GMWSQR
Trigger: CCGTTGGCTCCACATCCCCCATGACATCTCGACACA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCAGCCTGTCCTCGGGATaGGCCCCTTCAATTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPSLSSG*APSILQ
Trigger: TTGGAGAATTGAAGGGGCCCATCCCGAGGACAGGCT...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS-3UTR TCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCGGGTGCACATATATTTaGCACATCCCTGTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPGCTYI*HIPVLG
Trigger: CCCGAGGACAGGGATGTGTCAAATATATGTGCACCC...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS-3UTR GCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACCCTGCAGCGCGCATCTaGCTAAAACGCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYPAARI*LKRCRR
Trigger: GCGGCGGCAGCGTTTTAGGCAGATGCGCGCTGCAGG...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS-3UTR GCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGCACCGTGCCCCCGGCTaGATAGGTGTTGGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVHRAPG*IGVGVD
Trigger: ATCTACACCAACACCTATGCAGCCGGGGGCACGGTG...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCCAGTCGTGCTACTATTaGTCATGTCAGGCACACCAG +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPQSCYY*SCQAHQ
Trigger: CTGGTGTGCCTGACATGAGCAATAGTAGCACGACTG...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCCAACGGTTTGGCCTATaGGAAGGTCTGGACTCATCA +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPQRFGL*EGLDSS
Trigger: TGATGAGTCCAGACCTTCCCATAGGCCAAACCGTTG...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCGTTCGATTCGCAGTCTaGTCGAATTTTGGCAATGGG +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPVRFAV*SNFGNG
Trigger: CCCATTGCCAAAATTCGATCAGACTGCGAATCGAAC...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGTCCCCATACCTGTGTTaGGCTCCACTCCCGATACAC +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVSPYLC*APLPIH
Trigger: GTGTATCGGGAGTGGAGCTCAACACAGGTATGGGGA...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCCATCATGCCAATCCCTaGTGGTCCAAGACCAACATT +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPHHANP*WSKTNI
Trigger: AATGTTGGTCTTGGACCAGCAGGGATTGGCATGATG...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCGAATACCCCATATGGTaGTCGATCAATCCCTACTCC +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPEYPIW*SINPYS
Trigger: GGAGTAGGGATTGATCGACCACCATATGGGGTATTC...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCGGTGAATACCCCATATaGTGGTCGATCAATCCCTAC +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPGEYPI*WSINPY
Trigger: GTAGGGATTGATCGACCACCATATGGGGTATTCACC...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTTTGAAACTCCAGCTTaGTCTTCAGTGACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPFETPA*SSVTGP
Trigger: TGGGCCTGTCACTGAAGACCAAGCTGGAGTTTCAAA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCGAATCCATCCGATCCTaGGTATTTGAGGCTGTCATG +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPESIRS*VFEAVM
Trigger: CATGACAGCCTCAAATACCCAGGATCGGATGGATTC...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCGCCTATGGGAAGGTCTaGACTCATCATTTGCATCAC +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPAYGKV*THHLHH
Trigger: GTGATGCAAATGATGAGTCCAGACCTTCCCATAGGC...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCCAGAAAGATATGCTTTaGGACACCCTTTTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPQKDML*DTLLGG
Trigger: CCCTCCTAAAAGGGTGTCTCAAAGCATATCTTTCTG...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS-3UTR TCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTGTACCTATTCAGAATaGACATGGGTGCACCTGATG +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPCTYSE*TWVHLM
Trigger: CATCAGGTGCACCCATGTTCATTCTGAATAGGTACA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTACAACCCTCAGTCGTaGTACTATTGCTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPYNPQS*YYCSCQ
Trigger: CTGACATGAGCAATAGTAGCACGACTGAGGGTTGTA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACAGCGCTGGAGTTGCCTaGAGCGCGCATCTGCCTAAA +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYSAGVA*SAHLPK
Trigger: TTTAGGCAGATGCGCGCTGCAGGCAACTCCAGCGCT...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCGCCAATCCATTCCTTTaGGTTTCTCTTGCACGCAAA +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPANPFL*VSLARK
Trigger: TTTGCGTGCAAGAGAAACCCAAAGGAATGGATTGGC...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCAGTCTGATCGAATTTTaGCAATGGGGTTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPSLIEF*QWGSSS
Trigger: CGAAGAGGAACCCCATTGCCAAAATTCGATCAGACT...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCAGTGGGTTGCACACATaGATCAGCATTACCGTAAGT +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPSGLHT*ISITVS
Trigger: ACTTACGGTAATGCTGATCCATGTGTGCAACCCACT...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCCGGTTACTACAACATTaGGTGCAAGCTGAGGATCAA +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPRLLQH*VQAEDQ
Trigger: TTGATCCTCAGCTTGCACCCAATGTTGTAGTAACCG...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTTCTCTGTCTACCACTaGAGTGATGTTAATTTCCCC +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPFSVYH*SDVNFP
Trigger: GGGGAAATTAACATCACTTCAGTGGTAGACAGAGAA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACAGCTCCATCCCGATCTaGGCCTCTCACAACCAGGTT +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYSSIPI*ASHNQV
Trigger: AACCTGGTTGTGAGAGGCTCAGATCGGGATGGAGCT...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCAACAGAGATAAGGACTaGTGGAGAGTCAATGCAGAT +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPNRDKD*WRVNAD
Trigger: ATCTGCATTGACTCTCCATCAGTCCTTATCTCTGTT...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGCCAAGAAAGCCATGTTaGTGTCTGCGTCAGCGTAGT +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVPRKPC*CLRQRS
Trigger: ACTACGCTGACGCAGACATCAACATGGCTTTCTTGG...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGCCTCGTGGTCATAAATaGGCAAGCAGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVPRGHK*ASSHWL
Trigger: CAGCCAATGACTGCTTGCTCATTTATGACCACGAGG...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCGCTGTGTATACACTTTaGGAAAAGACTGGAGCGTTA +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPAVYTL*EKTGAL
Trigger: TAACGCTCCAGTCTTTTCGCAAAGTGTATACACAGC...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCATATCTGACATCTGTTaGAGGGTTTCCTGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPISDIC*RVSCVQ
Trigger: TTGGACACAGGAAACCCTGCAACAGATGTCAGATAT...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCCTGATGGAGAGTCAATaGAGATGGTTCTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPLMESQ*RWFFFQ
Trigger: CTGAAAGAAGAACCATCTGCATTGACTCTCCATCAG...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCTGTCCTCTGTGTAGATaGCCGCGGCACCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSCPLCR*PRHQSP
Trigger: TGGACTCTGGTGCCGCGGGCATCTACACAGAGGACA...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCACCGTGCCCCCGGCTaGATAGGTGTTGGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKHRAPG*IGVGVD
Trigger: ATCTACACCAACACCTATGCAGCCGGGGGCACGGTG...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGCAGTCGTGCTACTATTaGTCATGTCAGGCACACCAG +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVQSCYY*SCQAHQ
Trigger: CTGGTGTGCCTGACATGAGCAATAGTAGCACGACTG...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCAACCATTTCCAGCCATaGTTTCAGTTGGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPNHFQP*FQLANS
Trigger: AGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCCGGTATGTTATCTTCTaGTTCGATTCGCAGTCTGAT +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPRYVIF*FDSQSD
Trigger: ATCAGACTGCGAATCGAACCAGAAGATAACATACCG...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCAATTCTCACAGGGGTTaGGTGCATTTGGAATTGAGA +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPNSHRG*VHLELR
Trigger: TCTCAATTCCAAATGCACCCAACCCCTGTGAGAATT...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCCTGTGTCCAAATCTATaGCTGTATATGTGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPLCPNL*LYMCQA
Trigger: TGCTTGGCACATATACAGCCATAGATTTGGACACAG...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCGTCCTTCACCAGGATTaGGATTTCATAAAATCCTGG +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPVLHQD*DFIKSW
Trigger: CCAGGATTTTATGAAATCCCAATCCTGGTGAAGGAC...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACTCCCTGTCCTCGGGATaGGCCCCTTCAATTCTCCAA +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYSLSSG*APSILQ
Trigger: TTGGAGAATTGAAGGGGCCCATCCCGAGGACAGGGA...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS-3UTR CCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACTGTGTCGAGATGTCATaGGGGATGTGGAGCCAACGG +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYCVEMS*GMWSQR
Trigger: CCGTTGGCTCCACATCCCCCATGACATCTCGACACA...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCCTTGGTTTACAAGATTaGTTCTACAGGCCTCAAGAC +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPLGLQD*FYRPQD
Trigger: GTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAG...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
3UTR CAA 72 bp CAGGGCTTCTTTTGTAACTTCCAAGAACAAGGCATCTaGGTTTACAAGATTGGTTCTACAGGCCTCAAGACC +
Preference number: 4 (lower is better)
Translates to: QGFFCNFQEQGI*VYKIGSTGLKT
Trigger: GGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGAAGTTACAAAAGAAGCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCAAAGGCAAATGTTTCTaGAGAAGAGCCAATCCATTC +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPKGKCF*RRANPF
Trigger: GAATGGATTGGCTCTTCTTCAGAAACATTTGCCTTT...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCAGGCTGCGGCAAACTTaGTCCACTCCCGCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSRLRQT*STPAFV
Trigger: GACAAAAGCGGGAGTGGATCAAGTTTGCCGCAGCCT...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGGTTCGATTCGCAGTCTaGTCGAATTTTGGCAATGGG +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVVRFAV*SNFGNG
Trigger: CCCATTGCCAAAATTCGATCAGACTGCGAATCGAAC...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCAGCTCCATCCCGATCTaGGCCTCTCACAACCAGGTT +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSSSIPI*ASHNQV
Trigger: AACCTGGTTGTGAGAGGCTCAGATCGGGATGGAGCT...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCGTTTGTGGATCTGTTTaGATATCGAACCAATTCCCA +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPVCGSV*ISNQFP
Trigger: TGGGAATTGGTTCGATATTCAAACAGATCCACAAAC...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGGCCATAGTACTTGGATaGAATGCAGGTCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVAIVLG*NAGPSL
Trigger: GAGAGAAGGACCTGCATTTCATCCAAGTACTATGGC...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGCGAGGTAGCATTTGTTaGTCTGACATCCCACATGTC +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVRGSIC*SDIPHV
Trigger: GACATGTGGGATGTCAGATCAACAAATGCTACCTCG...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCAGCTTGGTCTTCAGTaGCAGGCCCATACGTGTCAC +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKQLGLQ*QAHTCH
Trigger: GTGACACGTATGGGCCTGTCACTGAAGACCAAGCTG...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCCAGCTTGGTCTTCAGTaGCAGGCCCATACGTGTCAC +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSQLGLQ*QAHTCH
Trigger: GTGACACGTATGGGCCTGTCACTGAAGACCAAGCTG...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCCCGATCCTGGGTATTTaGGGCTGTCATGGGTGCACA +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSPILGI*GCHGCT
Trigger: TGTGCACCCATGACAGCCTCAAATACCCAGGATCGG...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS-3UTR TCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGTCCCCATACCTGTGTTaGGCTCCACTCCCGATACAC +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKSPYLC*APLPIH
Trigger: GTGTATCGGGAGTGGAGCTCAACACAGGTATGGGGA...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTTGTACATACTGTGTTaGTCTCTGTCCAAGAAACTG +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPLYILC*SLSKKL
Trigger: CAGTTTCTTGGACAGAGAGCAACACAGTATGTACAA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTATAGCCAGGATCTCTaGTGTGTATATCCCATTGAT +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPYSQDL*CVYPID
Trigger: ATCAATGGGATATACACAGCAGAGATCCTGGCTATA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGCCTGGAGATAAAACCTaGTTAGCCGTAAGGATTGCC +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVPGDKT*LAVRIA
Trigger: GGCAATCCTTACGGCTAAGCAGGTTTTATCTCCAGG...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTCACAGGCATATAACTaGACCATTTGTGCCAATTCA +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPSQAYN*TICANS
Trigger: TGAATTGGCACAAATGGTGCAGTTATATGCCTGTGA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGCATCATGCCAATCCCTaGTGGTCCAAGACCAACATT +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVHHANP*WSKTNI
Trigger: AATGTTGGTCTTGGACCAGCAGGGATTGGCATGATG...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCAGCCATGTTGATGTCTaGGTCAGCGTAGTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSSHVDV*VSVVPQ
Trigger: CTGCGGGACTACGCTGACGCAGACATCAACATGGCT...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGGCCCTACTAAAATATTaGCGCTCATCACAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVALLKY*RSSQVP
Trigger: TGGGACCTGTGATGAGCGGCAATATTTTAGTAGGGC...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTGGAGAATATCTGGTTaGCAATTGAAAGCTCTACGA +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPWRISG*QLKALR
Trigger: TCGTAGAGCTTTCAATTGGCAACCAGATATTCTCCA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGCTCTGTCCAAGAAACTaGACATGGTGCAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVLCPRN*TWCRLL
Trigger: GAGAAGTCTGCACCATGTCCAGTTTCTTGGACAGAG...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGTTTGAAACTCCAGCTTaGTCTTCAGTGACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVFETPA*SSVTGP
Trigger: TGGGCCTGTCACTGAAGACCAAGCTGGAGTTTCAAA...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCGTGGAGCCAACGGTTTaGCCTATGGGAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSVEPTV*PMGRSG
Trigger: TCCAGACCTTCCCATAGGCCAAACCGTTGGCTCCAC...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACATGTCATGGGGGATGTaGAGCCAACGGTTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYMSWGM*SQRFGL
Trigger: TAGGCCAAACCGTTGGCTCCACATCCCCCATGACAT...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
3UTR CAA 72 bp GTAACTTCCAAGAACAAGGCATCTTGGTTTACAAGATaGGTTCTACAGGCCTCAAGACCCATAGGATTCACA +
Preference number: 4 (lower is better)
Translates to: VTSKNKASWFTR*VLQASRPIGFT
Trigger: TGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGAAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGTGTACCTATTCAGAATaGACATGGGTGCACCTGATG +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVCTYSE*TWVHLM
Trigger: CATCAGGTGCACCCATGTTCATTCTGAATAGGTACA...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGTCCAAGACCAACATTTaGAACTCCAGCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVSKTNI*NSSLVF
Trigger: GAAGACCAAGCTGGAGTTTCAAATGTTGGTCTTGGA...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACCCTCGTGGTCATAAATaGGCAAGCAGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYPRGHK*ASSHWL
Trigger: CAGCCAATGACTGCTTGCTCATTTATGACCACGAGG...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCATCATTTGCATCACTTaGATTTCTGGCCCTACTAAA +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPIICIT*ISGPTK
Trigger: TTTAGTAGGGCCAGAAATTCAAGTGATGCAAATGAT...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCCTGGCTGTCTCTGTTTaGAGCAACACAGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSLAVSV*SNTGAA
Trigger: TGCTGCTCCTGTGTTGCTGCAAACAGAGACAGCCAG...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGCACGGGTTCAGATGCTaGCATTTCTTCTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVHGFRC*HFFLEF
Trigger: GAATTCCAAGAAGAAATGGCAGCATCTGAACCCGTG...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCGACAGTATCAAGGGATaGAATACATTTTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPDSIKG*NTFSAH
Trigger: ATGTGCAGAAAATGTATTGCATCCCTTGATACTGTC...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCACTTTGCGAAAAGACTaGAGCGTTATCATTTATGTC +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPTLRKD*SVIIYV
Trigger: GACATAAATGATAACGCTCCAGTCTTTTCGCAAAGT...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTATTTTCTTCAATGCTaGCTGTGTATACACTTTGCG +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPYFLQC*LCIHFA
Trigger: CGCAAAGTGTATACACAGCCAGCATTGAAGAAAATA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCGCCTTCATTGGTTTGTaGATCTGTTTGAATATCGAA +
Preference number: 4 (lower is better)
Translates to: SKNKASWFTRLVLQASRPAFIGL*ICLNIE
Trigger: TTCGATATTCAAACAGATCCACAAACCAATGAAGGC...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGCATGTCAGCTATTCCTaGTGGCTCATCAACAACACA +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVHVSYS*WLINNT
Trigger: TGTGTTGTTGATGAGCCACCAGGAATAGCTGACATG...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGACAATAATATCCCCATaGACCACGGGTTCAGATGCT +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVTIISP*TTGSDA
Trigger: AGCATCTGAACCCGTGGTCCATGGGGATATTATTGT...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACCAACGGTTTGGCCTATaGGAAGGTCTGGACTCATCA +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYQRFGL*EGLDSS
Trigger: TGATGAGTCCAGACCTTCCCATAGGCCAAACCGTTG...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGATGTCATGGGGGATGTaGAGCCAACGGTTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKMSWGM*SQRFGL
Trigger: TAGGCCAAACCGTTGGCTCCACATCCCCCATGACAT...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGTTCTCTGTCTACCACTaGAGTGATGTTAATTTCCCC +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVFSVYH*SDVNFP
Trigger: GGGGAAATTAACATCACTTCAGTGGTAGACAGAGAA...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGACTCCGATACTAAGCTaGATGTTAGGTGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVTPILS*MLGACS
Trigger: TGAACAAGCACCTAACATTCAGCTTAGTATCGGAGT...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGAGTACTTGGATGAAATaGAGGTCCTTCTCTCACATC +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVSTWMK*RSFSHI
Trigger: GATGTGAGAGAAGGACCTGCATTTCATCCAAGTACT...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACCCTGGAGATAAAACCTaGTTAGCCGTAAGGATTGCC +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYPGDKT*LAVRIA
Trigger: GGCAATCCTTACGGCTAAGCAGGTTTTATCTCCAGG...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGTCAATTCTCCAAGACTaGATCACTCCTTCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKSILQD*ITPSPP
Trigger: GGGCGGAGAAGGAGTGATGCAGTCTTGGAGAATTGA...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACGCCCTACTAAAATATTaGCGCTCATCACAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYALLKY*RSSQVP
Trigger: TGGGACCTGTGATGAGCGGCAATATTTTAGTAGGGC...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGAAGGCTTATCTAAAGTaGCTAGCCATATTCACCCTC +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVKAYLK*LAIFTL
Trigger: GAGGGTGAATATGGCTAGGCACTTTAGATAAGCCTT...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGAACCATTTCCAGCCATaGTTTCAGTTGGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVNHFQP*FQLANS
Trigger: AGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGCGGTATGTTATCTTCTaGTTCGATTCGCAGTCTGAT +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVRYVIF*FDSQSD
Trigger: ATCAGACTGCGAATCGAACCAGAAGATAACATACCG...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACGAATACCCCATATGGTaGTCGATCAATCCCTACTCC +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYEYPIW*SINPYS
Trigger: GGAGTAGGGATTGATCGACCACCATATGGGGTATTC...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACGGTGAATACCCCATATaGTGGTCGATCAATCCCTAC +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYGEYPI*WSINPY
Trigger: GTAGGGATTGATCGACCACCATATGGGGTATTCACC...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGAATTCTCACAGGGGTTaGGTGCATTTGGAATTGAGA +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVNSHRG*VHLELR
Trigger: TCTCAATTCCAAATGCACCCAACCCCTGTGAGAATT...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGGTCCTTCACCAGGATTaGGATTTCATAAAATCCTGG +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVVLHQD*DFIKSW
Trigger: CCAGGATTTTATGAAATCCCAATCCTGGTGAAGGAC...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACGCCTATGGGAAGGTCTaGACTCATCATTTGCATCAC +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYAYGKV*THHLHH
Trigger: GTGATGCAAATGATGAGTCCAGACCTTCCCATAGGC...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGGTTTGTGGATCTGTTTaGATATCGAACCAATTCCCA +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVVCGSV*ISNQFP
Trigger: TGGGAATTGGTTCGATATTCAAACAGATCCACAAAC...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCTCACATCAACAACTTaGATTCTCACAGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKLTSTT*ILTGVG
Trigger: CCCAACCCCTGTGAGAATTCAAGTTGTTGATGTGAG...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCCTCACATCAACAACTTaGATTCTCACAGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSLTSTT*ILTGVG
Trigger: CCCAACCCCTGTGAGAATTCAAGTTGTTGATGTGAG...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCCGAGGTAGCATTTGTTaGTCTGACATCCCACATGTC +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSRGSIC*SDIPHV
Trigger: GACATGTGGGATGTCAGATCAACAAATGCTACCTCG...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGAAGGGAGGTCAGTACTaGTTGGTATACAAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKKGGQY*LVYKPG
Trigger: ACCAGGCTTGTATACCAATCAGTACTGACCTCCCTT...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCAAGGGAGGTCAGTACTaGTTGGTATACAAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSKGGQY*LVYKPG
Trigger: ACCAGGCTTGTATACCAATCAGTACTGACCTCCCTT...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCAGAAACTGGACATGGTaGAGACTTCTCCAGTGTACC +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSRNWTW*RLLQCT
Trigger: GGTACACTGGAGAAGTCTGCACCATGTCCAGTTTCT...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGTATAGCCAGGATCTCTaGTGTGTATATCCCATTGAT +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVYSQDL*CVYPID
Trigger: ATCAATGGGATATACACAGCAGAGATCCTGGCTATA...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGTTGTGCCAATTCACATaGTCTGTTATAGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVLCQFT*SVIAVL
Trigger: AAGGACAGCTATAACAGAGCATGTGAATTGGCACAA...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACAAATCAGTAGCAGGATaGCCAGAACCATCATGCCAA +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYKSVAG*PEPSCQ
Trigger: TTGGCATGATGGTTCTGGGCATCCTGCTACTGATTT...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCGACCACGGGTTCAGATaGTGCCATTTCTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSDHGFR*CHFFLE
Trigger: TTCCAAGAAGAAATGGCAGCATCTGAACCCGTGGTC...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACTACAACCCTCAGTCGTaGTACTATTGCTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYYNPQS*YYCSCQ
Trigger: CTGACATGAGCAATAGTAGCACGACTGAGGGTTGTA...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCCCAAGAAACTGGACATaGTGCAGACTTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSPRNWT*CRLLQC
Trigger: ACACTGGAGAAGTCTGCACCATGTCCAGTTTCTTGG...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCCAAGAAACTGGACATaGTGCAGACTTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKPRNWT*CRLLQC
Trigger: ACACTGGAGAAGTCTGCACCATGTCCAGTTTCTTGG...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCTCTGTCCAAGAAACTaGACATGGTGCAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKLCPRN*TWCRLL
Trigger: GAGAAGTCTGCACCATGTCCAGTTTCTTGGACAGAG...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGATTGGTATACAAGCCTaGTGTGAAGGAAATGGTTCA +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVIGIQA*CEGNGS
Trigger: TGAACCATTTCCTTCACACCAGGCTTGTATACCAAT...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACGAAAAGGGAGGATGTTaGTTTAACAGCGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYEKGGC*FNSAGV
Trigger: AACTCCAGCGCTGTTAAACCAACATCCTCCCTTTTC...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS-3UTR TCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGGAGAGAATTAAATATTaGGCCAACCAGTTATCAGTG +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVERIKY*ANQLSV
Trigger: CACTGATAACTGGTTGGCTCAATATTTAATTCTCTC...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGCATAATCCAGCATCTTaGCAACTTTCAAAATGCCTT +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVHNPAS*QLSKCL
Trigger: AAGGCATTTTGAAAGTTGTCAAGATGCTGGATTATG...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACTATCTGGTTGCCAATTaGAAGCTCTACGATTCAGGT +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYYLVAN*KLYDSG
Trigger: ACCTGAATCGTAGAGCTTTCAATTGGCAACCAGATA...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGAAGCTGAATGTTAGGTaGTTGTTCATAATCCAGCAT +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVKLNVR*LFIIQH
Trigger: ATGCTGGATTATGAACAAGCACCTAACATTCAGCTT...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCAGCTGCCTGCATCATaGCCTATGATATATCTGACA +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKQLPAS*PMIYLT
Trigger: TGTCAGATATATCATAGGGCATGATGCAGGCAGCTG...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGAAATCAGTAGCAGGATaGCCAGAACCATCATGCCAA +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKKSVAG*PEPSCQ
Trigger: TTGGCATGATGGTTCTGGGCATCCTGCTACTGATTT...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGTACTACAACATTGGGTaGAAGCTGAGGATCAAAAAT +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVYYNIG*KLRIKN
Trigger: ATTTTTGATCCTCAGCTTGCACCCAATGTTGTAGTA...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACGACAGGTGCCATTACTaGTTCGGTTACTACAACATT +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYDRCHY*FGYYNI
Trigger: AATGTTGTAGTAACCGAAGCAGTAATGGCACCTGTC...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGAGTCTGATCGAATTTTaGCAATGGGGTTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKSLIEF*QWGSSS
Trigger: CGAAGAGGAACCCCATTGCCAAAATTCGATCAGACT...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGACTTTGCGAAAAGACTaGAGCGTTATCATTTATGTC +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVTLRKD*SVIIYV
Trigger: GACATAAATGATAACGCTCCAGTCTTTTCGCAAAGT...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACCTGTGTCCAAATCTATaGCTGTATATGTGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYLCPNL*LYMCQA
Trigger: TGCTTGGCACATATACAGCCATAGATTTGGACACAG...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCATGTCAGCTATTCCTaGTGGCTCATCAACAACACA +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKHVSYS*WLINNT
Trigger: TGTGTTGTTGATGAGCCACCAGGAATAGCTGACATG...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGTATTTGAGGCTGTCATaGGTGCACATATATTTGACA +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVYLRLS*VHIYLT
Trigger: TGTCAAATATATGTGCACCCATGACAGCCTCAAATA...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS-3UTR CCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGACAATAATATCCCCATaGACCACGGGTTCAGATGCT +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKTIISP*TTGSDA
Trigger: AGCATCTGAACCCGTGGTCCATGGGGATATTATTGT...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCCGGTTACTACAACATTaGGTGCAAGCTGAGGATCAA +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSRLLQH*VQAEDQ
Trigger: TTGATCCTCAGCTTGCACCCAATGTTGTAGTAACCG...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACCTTGGTTTACAAGATTaGTTCTACAGGCCTCAAGAC +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYLGLQD*FYRPQD
Trigger: GTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAG...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCCGGCTGCATAGGTGTTaGTGTAGATTTCTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSRLHRC*CRFLKR
Trigger: CCTTTTCAGAAATCTACACCAACACCTATGCAGCCG...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS-3UTR TCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCACTCCGATACTAAGCTaGATGTTAGGTGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSTPILS*MLGACS
Trigger: TGAACAAGCACCTAACATTCAGCTTAGTATCGGAGT...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGAACAGAGATAAGGACTaGTGGAGAGTCAATGCAGAT +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKNRDKD*WRVNAD
Trigger: ATCTGCATTGACTCTCCATCAGTCCTTATCTCTGTT...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCTATCTGGTTGCCAATTaGAAGCTCTACGATTCAGGT +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSYLVAN*KLYDSG
Trigger: ACCTGAATCGTAGAGCTTTCAATTGGCAACCAGATA...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGGTTGGTGTAGATTTCTaGAAAGGGAGGATGTTGGTT +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKVGVDF*KGRMLV
Trigger: AACCAACATCCTCCCTTTTCAGAAATCTACACCAAC...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS-3UTR GCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCGCTGTGTATACACTTTaGGAAAAGACTGGAGCGTTA +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSAVYTL*EKTGAL
Trigger: TAACGCTCCAGTCTTTTCGCAAAGTGTATACACAGC...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACTTGTACATACTGTGTTaGTCTCTGTCCAAGAAACTG +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYLYILC*SLSKKL
Trigger: CAGTTTCTTGGACAGAGAGCAACACAGTATGTACAA...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGCTATGGCTGTATATGTaGCAAGCACATAATTCAATA +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVLWLYM*QAHNSI
Trigger: TATTGAATTATGTGCTTGGCACATATACAGCCATAG...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCATATCTGACATCTGTTaGAGGGTTTCCTGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSISDIC*RVSCVQ
Trigger: TTGGACACAGGAAACCCTGCAACAGATGTCAGATAT...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCCTGATGGAGAGTCAATaGAGATGGTTCTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSLMESQ*RWFFFQ
Trigger: CTGAAAGAAGAACCATCTGCATTGACTCTCCATCAG...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGGACAGGTGCCATTACTaGTTCGGTTACTACAACATT +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKDRCHY*FGYYNI
Trigger: AATGTTGTAGTAACCGAAGCAGTAATGGCACCTGTC...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACAATATCATAGACAGGTaGCATTACTGCTTCGGTTAC +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYNIIDR*HYCFGY
Trigger: GTAACCGAAGCAGTAATGGCACCTGTCTATGATATT...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACCTTCATCTGCATCTGTaGCACATAACTTTACTACCA +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYLHLHL*HITLLP
Trigger: TGGTAGTAAAGTTATGTGCCACAGATGCAGATGAAG...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGAAGAACAAGGCATCTTaGTTTACAAGATTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVKNKAS*FTRLVL
Trigger: TAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTT...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCAAAGGCAAATGTTTCTaGAGAAGAGCCAATCCATTC +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSKGKCF*RRANPF
Trigger: GAATGGATTGGCTCTTCTTCAGAAACATTTGCCTTT...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACTCACCACCATTAGAATaGTCAAAAGGCAAATGTTTC +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYSPPLE*SKGKCF
Trigger: GAAACATTTGCCTTTTGATCATTCTAATGGTGGTGA...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACGAGAGAATTAAATATTaGGCCAACCAGTTATCAGTG +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYERIKY*ANQLSV
Trigger: CACTGATAACTGGTTGGCTCAATATTTAATTCTCTC...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCTCAGTTCCGAATTCTaGTCTACAGAAAGATATGCT +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKLSSEF*STERYA
Trigger: AGCATATCTTTCTGTAGAGCAGAATTCGGAACTGAG...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS-3UTR GCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACTGTCTTCTGACTGTTTaGCATTTTGTAGTGCCATTT +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYCLLTV*HFVVPF
Trigger: AAATGGCACTACAAAATGGCAAACAGTCAGAAGACA...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCTTGTGCCAATTCACATaGTCTGTTATAGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSLCQFT*SVIAVL
Trigger: AAGGACAGCTATAACAGAGCATGTGAATTGGCACAA...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGTCACAGGCATATAACTaGACCATTTGTGCCAATTCA +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKSQAYN*TICANS
Trigger: TGAATTGGCACAAATGGTGCAGTTATATGCCTGTGA...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACATAATTGTAGTGGGTTaGACACATGGATCAGCATTA +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYIIVVG*THGSAL
Trigger: TAATGCTGATCCATGTGTGCAACCCACTACAATTAT...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACTATTTTCTTCAATGCTaGCTGTGTATACACTTTGCG +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYYFLQC*LCIHFA
Trigger: CGCAAAGTGTATACACAGCCAGCATTGAAGAAAATA...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCCTTCATCTGCATCTGTaGCACATAACTTTACTACCA +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSLHLHL*HITLLP
Trigger: TGGTAGTAAAGTTATGTGCCACAGATGCAGATGAAG...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCACTACAGAGTGCTTTTaGAGAATATCTGGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSTTECF*RISGCQ
Trigger: TTGGCAACCAGATATTCTCCAAAAGCACTCTGTAGT...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCATAATCCAGCATCTTaGCAACTTTCAAAATGCCTT +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKHNPAS*QLSKCL
Trigger: AAGGCATTTTGAAAGTTGTCAAGATGCTGGATTATG...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGACATTGGGTGCAAGCTaGGGATCAAAAATAATTGTA +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKTLGAS*GSKIIV
Trigger: TACAATTATTTTTGATCCTCAGCTTGCACCCAATGT...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR TCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCATCATTTGCATCACTTaGATTTCTGGCCCTACTAAA +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSIICIT*ISGPTK
Trigger: TTTAGTAGGGCCAGAAATTCAAGTGATGCAAATGAT...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGAAGCTGAATGTTAGGTaGTTGTTCATAATCCAGCAT +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKKLNVR*LFIIQH
Trigger: ATGCTGGATTATGAACAAGCACCTAACATTCAGCTT...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACGATCTAAAGTTTCCATaGAGCTTTCATCTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYDLKFP*SFHLSH
Trigger: ATGACTTAGATGAAAGCTGCATGGAAACTTTAGATC...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCATAATTGTAGTGGGTTaGACACATGGATCAGCATTA +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSIIVVG*THGSAL
Trigger: TAATGCTGATCCATGTGTGCAACCCACTACAATTAT...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGTACTACAACATTGGGTaGAAGCTGAGGATCAAAAAT +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKYYNIG*KLRIKN
Trigger: ATTTTTGATCCTCAGCTTGCACCCAATGTTGTAGTA...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGGCCTTCATTGGTTTGTaGATCTGTTTGAATATCGAA +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKAFIGL*ICLNIE
Trigger: TTCGATATTCAAACAGATCCACAAACCAATGAAGGC...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCTATGGCTGTATATGTaGCAAGCACATAATTCAATA +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKLWLYM*QAHNSI
Trigger: TATTGAATTATGTGCTTGGCACATATACAGCCATAG...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR GCA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCGATCTAAAGTTTCCATaGAGCTTTCATCTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: NHFQPCFQLANSFLIILSDLKFP*SFHLSH
Trigger: ATGACTTAGATGAAAGCTGCATGGAAACTTTAGATC...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CCA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGAAGAACAAGGCATCTTaGTTTACAAGATTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKKNKAS*FTRLVL
Trigger: TAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTT...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS GCA 90 bp TTAACAGCGCTGGAGTTGCCTGCAGCGCGCATCTGCCTAAAACGCTaGCGCCGCCGTCTGCGGTGCCACCACCACCCGGCAAGGCGTAGG +
Preference number: 5 (lower is better)
Translates to: LTALELPAARICLKR*RRRLRCHHHPARRR
Trigger: CCTACGCCTTGCCGGGTGGTGGTGGCACCGCAGACGGCGGCGGCAGCGTTTTAGGCAGATGCGCGCTGCAGGCAACTCCAGCGCTGTTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS GCA 90 bp GAGGATGTTGGTTTAACAGCGCTGGAGTTGCCTGCAGCGCGCATCTaGCTAAAACGCTGCCGCCGCCGTCTGCGGTGCCACCACCACCCG +
Preference number: 5 (lower is better)
Translates to: EDVGLTALELPAARI*LKRCRRRLRCHHHP
Trigger: CGGGTGGTGGTGGCACCGCAGACGGCGGCGGCAGCGTTTTAGGCAGATGCGCGCTGCAGGCAACTCCAGCGCTGTTAAACCAACATCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS GCA 90 bp ATTTCTGAAAAGGGAGGATGTTGGTTTAACAGCGCTGGAGTTGCCTaGAGCGCGCATCTGCCTAAAACGCTGCCGCCGCCGTCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: ISEKGGCWFNSAGVA*SAHLPKTLPPPSAV
Trigger: CACCGCAGACGGCGGCGGCAGCGTTTTAGGCAGATGCGCGCTGCAGGCAACTCCAGCGCTGTTAAACCAACATCCTCCCTTTTCAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS GCA 90 bp GTTGAGCTCCACTCCCGATACACCTCCTTCCACCGTGCCCCCGGCTaGATAGGTGTTGGTGTAGATTTCAGAGGAATCCATCCGATCCTG +
Preference number: 5 (lower is better)
Translates to: VELHSRYTSFHRAPG*IGVGVDFRGIHPIL
Trigger: CAGGATCGGATGGATTCCTCTGAAATCTACACCAACACCTATGCAGCCGGGGGCACGGTGGAAGGAGGTGTATCGGGAGTGGAGCTCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS GCA 90 bp GACACATCCCTGTCCTCGGGATGGGCCCCTTCAATTCTCCAAGACTaGATCACTCCTTCTCCGCCCTCAGGCACAGGAGCAAATCTTGTT +
Preference number: 5 (lower is better)
Translates to: DTSLSSGWAPSILQD*ITPSPPSGTGANLV
Trigger: AACAAGATTTGCTCCTGTGCCTGAGGGCGGAGAAGGAGTGATGCAGTCTTGGAGAATTGAAGGGGCCCATCCCGAGGACAGGGATGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS GCA 90 bp CGCTTTCTCCGAGAAGTAGCTGTCCAAGAAAGCCATGTTGATGTCTaGGTCAGCGTAGTCCCGCAGGGTTCCCATGGTAGAGCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: RFLREVAVQESHVDV*VSVVPQGSHGRAPL
Trigger: AAGAGGAGCTCTACCATGGGAACCCTGCGGGACTACGCTGACGCAGACATCAACATGGCTTTCTTGGACAGCTACTTCTCGGAGAAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 90 bp CTCCCGATACACCTCCTTCCACCGTGCCCCCGGCTGCATAGGTGTTaGTGTAGATTTCTGAAAAGGGAGGATGTTGGTTTAACAGCGCTG +
Preference number: 5 (lower is better)
Translates to: LPIHLLPPCPRLHRC*CRFLKREDVGLTAL
Trigger: CAGCGCTGTTAAACCAACATCCTCCCTTTTCAGAAATCTACACCAACACCTATGCAGCCGGGGGCACGGTGGAAGGAGGTGTATCGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS TCA 90 bp GCCCAGAACCATCATGCCAATCCCTGCTGGTCCAAGACCAACATTTaGAACTCCAGCTTGGTCTTCAGTGACAGGCCCATACGTGTCACC +
Preference number: 5 (lower is better)
Translates to: AQNHHANPCWSKTNI*NSSLVFSDRPIRVT
Trigger: GGTGACACGTATGGGCCTGTCACTGAAGACCAAGCTGGAGTTTCAAATGTTGGTCTTGGACCAGCAGGGATTGGCATGATGGTTCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS GCA 90 bp CTAAAAAGCCTGTCCTCGGGATGGGCCCCTTCAATTCTCCAAGACTaGATCACTCCTTCTCCGCCCTCAGGCACAGGAGCAAATCTTGTT +
Preference number: 5 (lower is better)
Translates to: LKSLSSGWAPSILQD*ITPSPPSGTGANLV
Trigger: AACAAGATTTGCTCCTGTGCCTGAGGGCGGAGAAGGAGTGATGCAGTCTTGGAGAATTGAAGGGGCCCATCCCGAGGACAGGCTTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS GCA 90 bp GCACAGGAGCAAATCTTGTTCCCAGGCCTTCTGGCTGTCTCTGTTTaGAGCAACACAGGAGCAGCAAGAGTGGAGCCAAAATCAGTAGCA +
Preference number: 5 (lower is better)
Translates to: AQEQILFPGLLAVSV*SNTGAARVEPKSVA
Trigger: TGCTACTGATTTTGGCTCCACTCTTGCTGCTCCTGTGTTGCTGCAAACAGAGACAGCCAGAAGGCCTGGGAACAAGATTTGCTCCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 90 bp AGATTTCAGAGGAATCCATCCGATCCTGGGTATTTGAGGCTGTCATaGGTGCACATATATTTGACACATCCCTGTCCTCGGGATGGGCCC +
Preference number: 5 (lower is better)
Translates to: RFQRNPSDPGYLRLS*VHIYLTHPCPRDGP
Trigger: GGGCCCATCCCGAGGACAGGGATGTGTCAAATATATGTGCACCCATGACAGCCTCAAATACCCAGGATCGGATGGATTCCTCTGAAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS CCA 90 bp TGTGTCGAGATGTCATGGGGGATGTGGAGCCAACGGTTTGGCCTATaGGAAGGTCTGGACTCATCATTTGCATCACTTGAATTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: CVEMSWGMWSQRFGL*EGLDSSFASLEFLA
Trigger: GGCCAGAAATTCAAGTGATGCAAATGATGAGTCCAGACCTTCCCATAGGCCAAACCGTTGGCTCCACATCCCCCATGACATCTCGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS TCA 90 bp CTGCTGGTCCAAGACCAACATTTGAAACTCCAGCTTGGTCTTCAGTaGCAGGCCCATACGTGTCACCAGTTATGTCCTCTGTGTAGATGC +
Preference number: 5 (lower is better)
Translates to: LLVQDQHLKLQLGLQ*QAHTCHQLCPLCRC
Trigger: GCATCTACACAGAGGACATAACTGGTGACACGTATGGGCCTGTCACTGAAGACCAAGCTGGAGTTTCAAATGTTGGTCTTGGACCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTCCGATCCTGGGTATTaGAGGCTGTCATGGGTGCAC +
Preference number: 5 (lower is better)
Translates to: SKNKASWFTRLVLQASRPSDPGY*RLSWVH
Trigger: GTGCACCCATGACAGCCTCAAATACCCAGGATCGGA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS-3UTR CAA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCGTCCCCATACCTGTGTaGAGCTCCACTCCCGATACA +
Preference number: 5 (lower is better)
Translates to: SKNKASWFTRLVLQASRPVPIPV*SSTPDT
Trigger: TGTATCGGGAGTGGAGCTCAACACAGGTATGGGGAC...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 90 bp TGTTACTGTATCGTGTTACTCTGTGTCGAGATGTCATGGGGGATGTaGAGCCAACGGTTTGGCCTATGGGAAGGTCTGGACTCATCATTT +
Preference number: 5 (lower is better)
Translates to: CYCIVLLCVEMSWGM*SQRFGLWEGLDSSF
Trigger: AAATGATGAGTCCAGACCTTCCCATAGGCCAAACCGTTGGCTCCACATCCCCCATGACATCTCGACACAGAGTAACACGATACAGTAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 90 bp TGTAATGTATGTTACTGTATCGTGTTACTCTGTGTCGAGATGTCATaGGGGATGTGGAGCCAACGGTTTGGCCTATGGGAAGGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: CNVCYCIVLLCVEMS*GMWSQRFGLWEGLD
Trigger: GTCCAGACCTTCCCATAGGCCAAACCGTTGGCTCCACATCCCCCATGACATCTCGACACAGAGTAACACGATACAGTAACATACATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTCCAGGCACATGTGGTaGTCATCGCAATCACAGGCA +
Preference number: 5 (lower is better)
Translates to: SKNKASWFTRLVLQASRPSRHMW*SSQSQA
Trigger: TGCCTGTGATTGCGATGACAACCACATGTGCCTGGA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCGGCCCTACTAAAATATaGCCGCTCATCACAGGTCCC +
Preference number: 5 (lower is better)
Translates to: SKNKASWFTRLVLQASRPGPTKI*PLITGP
Trigger: GGGACCTGTGATGAGCGGCAATATTTTAGTAGGGCC...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS TCA 90 bp ACGGTTTGGCCTATGGGAAGGTCTGGACTCATCATTTGCATCACTTaGATTTCTGGCCCTACTAAAATATTGCCGCTCATCACAGGTCCC +
Preference number: 5 (lower is better)
Translates to: TVWPMGRSGLIICIT*ISGPTKILPLITGP
Trigger: GGGACCTGTGATGAGCGGCAATATTTTAGTAGGGCCAGAAATTCAAGTGATGCAAATGATGAGTCCAGACCTTCCCATAGGCCAAACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTGGGTGCACATATATTaGACACATCCCTGTCCTCGG +
Preference number: 5 (lower is better)
Translates to: SKNKASWFTRLVLQASRPWVHIY*THPCPR
Trigger: CCGAGGACAGGGATGTGTCAAATATATGTGCACCCA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS-3UTR CAA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCATGAGCAAGCAGTCATaGGCTGGTCGACCTTCATCT +
Preference number: 5 (lower is better)
Translates to: SKNKASWFTRLVLQASRPMSKQS*AGRPSS
Trigger: AGATGAAGGTCGACCAGCCAATGACTGCTTGCTCAT...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTCAGTCGTGCTACTATaGCTCATGTCAGGCACACCA +
Preference number: 5 (lower is better)
Translates to: SKNKASWFTRLVLQASRPSVVLL*LMSGTP
Trigger: TGGTGTGCCTGACATGAGCAATAGTAGCACGACTGA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGTGTGGAGCCAACGGTTaGGCCTATGGGAAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVCGANG*AYGKVW
Trigger: CCAGACCTTCCCATAGGCCAAACCGTTGGCTCCACA...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCAGCCAATCCATTCCTTaGGGTTTCTCTTGCACGCAA +
Preference number: 5 (lower is better)
Translates to: SKNKASWFTRLVLQASRPSQSIP*GFSCTQ
Trigger: TTGCGTGCAAGAGAAACCCAAAGGAATGGATTGGCT...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCCCTCTCACAACCAGGTaGTACATACTGTGTTGCTCT +
Preference number: 5 (lower is better)
Translates to: SKNKASWFTRLVLQASRPPLTTR*YILCCS
Trigger: AGAGCAACACAGTATGTACAACCTGGTTGTGAGAGG...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGTCTGGCTGTCTCTGTTaGCAGCAACACAGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVSGCLC*QQHRSS
Trigger: GCTGCTCCTGTGTTGCTGCAAACAGAGACAGCCAGA...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS GCA 90 bp CCTGTGAGATTCAATTTGAGCCCTCGTCTTCTCAGTTCCGAATTCTaGTCTACAGAAAGATATGCTTTGAGACACCCTTTTAGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: PVRFNLSPRLLSSEF*STERYALRHPFRRA
Trigger: TGCCCTCCTAAAAGGGTGTCTCAAAGCATATCTTTCTGTAGAGCAGAATTCGGAACTGAGAAGACGAGGGCTCAAATTGAATCTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS-3UTR CAA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCGTCCAAGACCAACATTaGAAACTCCAGCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: SKNKASWFTRLVLQASRPVQDQH*KLQLGL
Trigger: AAGACCAAGCTGGAGTTTCAAATGTTGGTCTTGGAC...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGTTAACAGCGCTGGAGTaGCCTGCAGCGCGCATCTGC +
Preference number: 5 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKLTALE*PAARIC
Trigger: GCAGATGCGCGCTGCAGGCAACTCCAGCGCTGTTAA...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS TCA 90 bp ACAGGTGCCATTACTGCTTCGGTTACTACAACATTGGGTGCAAGCTaGGGATCAAAAATAATTGTAGTGGGTTGCACACATGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: TGAITASVTTTLGAS*GSKIIVVGCTHGSA
Trigger: TGCTGATCCATGTGTGCAACCCACTACAATTATTTTTGATCCTCAGCTTGCACCCAATGTTGTAGTAACCGAAGCAGTAATGGCACCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS GCA 90 bp GACTCATCATTTGCATCACTTGAATTTCTGGCCCTACTAAAATATTaGCGCTCATCACAGGTCCCATACAACCCTCAGTCGTGCTACTAT +
Preference number: 5 (lower is better)
Translates to: DSSFASLEFLALLKY*RSSQVPYNPQSCYY
Trigger: ATAGTAGCACGACTGAGGGTTGTATGGGACCTGTGATGAGCGGCAATATTTTAGTAGGGCCAGAAATTCAAGTGATGCAAATGATGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACCAGGCTGCGGCAAACTaGATCCACTCCCGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYQAAAN*IHSRFC
Trigger: ACAAAAGCGGGAGTGGATCAAGTTTGCCGCAGCCTG...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGAGGGGTTGGGTGCATTaGGAATTGAGAAGCAACGGA +
Preference number: 5 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVRGWVH*ELRSNG
Trigger: TCCGTTGCTTCTCAATTCCAAATGCACCCAACCCCT...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACGCACAGGAGCAAATCTaGTTCCCAGGCCTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYAQEQI*FPGLLA
Trigger: AGCCAGAAGGCCTGGGAACAAGATTTGCTCCTGTGC...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACGTCCCCATACCTGTGTaGAGCTCCACTCCCGATACA +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYVPIPV*SSTPDT
Trigger: TGTATCGGGAGTGGAGCTCAACACAGGTATGGGGAC...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGTGTGGAGCCAACGGTTaGGCCTATGGGAAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKCGANG*AYGKVW
Trigger: CCAGACCTTCCCATAGGCCAAACCGTTGGCTCCACA...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS GCA 90 bp ATCATAGACAGGTGCCATTACTGCTTCGGTTACTACAACATTGGGTaGAAGCTGAGGATCAAAAATAATTGTAGTGGGTTGCACACATGG +
Preference number: 5 (lower is better)
Translates to: IIDRCHYCFGYYNIG*KLRIKNNCSGLHTW
Trigger: CCATGTGTGCAACCCACTACAATTATTTTTGATCCTCAGCTTGCACCCAATGTTGTAGTAACCGAAGCAGTAATGGCACCTGTCTATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 90 bp GGGTGCAAGCTGAGGATCAAAAATAATTGTAGTGGGTTGCACACATaGATCAGCATTACCGTAAGTCTCAGTCACAATAATATCCCCATG +
Preference number: 5 (lower is better)
Translates to: GCKLRIKNNCSGLHT*ISITVSLSHNNIPM
Trigger: CATGGGGATATTATTGTGACTGAGACTTACGGTAATGCTGATCCATGTGTGCAACCCACTACAATTATTTTTGATCCTCAGCTTGCACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGAGCCAATCCATTCCTTaGGGTTTCTCTTGCACGCAA +
Preference number: 5 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVSQSIP*GFSCTQ
Trigger: TTGCGTGCAAGAGAAACCCAAAGGAATGGATTGGCT...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTTGTCTTCTGACTGTTaGCCATTTTGTAGTGCCATT +
Preference number: 5 (lower is better)
Translates to: SKNKASWFTRLVLQASRPLSSDC*PFCSAI
Trigger: AATGGCACTACAAAATGGCAAACAGTCAGAAGACAA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCAGGCTGCGGCAAACTaGATCCACTCCCGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKQAAAN*IHSRFC
Trigger: ACAAAAGCGGGAGTGGATCAAGTTTGCCGCAGCCTG...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGGAATTCTCACAGGGGTaGGGTGCATTTGGAATTGAG +
Preference number: 5 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVEFSQG*GAFGIE
Trigger: CTCAATTCCAAATGCACCCAACCCCTGTGAGAATTC...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCGCACAGGAGCAAATCTaGTTCCCAGGCCTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSAQEQI*FPGLLA
Trigger: AGCCAGAAGGCCTGGGAACAAGATTTGCTCCTGTGC...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCAATAATTGTAGTGGGTaGCACACATGGATCAGCATT +
Preference number: 5 (lower is better)
Translates to: SKNKASWFTRLVLQASRPNNCSG*HTWISI
Trigger: AATGCTGATCCATGTGTGCAACCCACTACAATTATT...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACGGCCCTACTAAAATATaGCCGCTCATCACAGGTCCC +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYGPTKI*PLITGP
Trigger: GGGACCTGTGATGAGCGGCAATATTTTAGTAGGGCC...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 90 bp ATAATATCCCCATGGACCACGGGTTCAGATGCTGCCATTTCTTCTTaGAATTCAACTTCTGAGGGAGTCAATCCTGAAGATTCATTAACA +
Preference number: 5 (lower is better)
Translates to: IISPWTTGSDAAISS*NSTSEGVNPEDSLT
Trigger: TGTTAATGAATCTTCAGGATTGACTCCCTCAGAAGTTGAATTCCAAGAAGAAATGGCAGCATCTGAACCCGTGGTCCATGGGGATATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCAATGCCTTCATTGGTTaGTGGATCTGTTTGAATATC +
Preference number: 5 (lower is better)
Translates to: SKNKASWFTRLVLQASRPNAFIG*WICLNI
Trigger: GATATTCAAACAGATCCACAAACCAATGAAGGCATT...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGTCTCACATCAACAACTaGAATTCTCACAGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVSHINN*NSHRGW
Trigger: CCAACCCCTGTGAGAATTCAAGTTGTTGATGTGAGA...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCGTATCTCACCAGTTCTaGAATCAATTTTTAACCAGC +
Preference number: 5 (lower is better)
Translates to: SKNKASWFTRLVLQASRPVSHQF*NQFLTS
Trigger: GCTGGTTAAAAATTGATTCAAGAACTGGTGAGATAC...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGTCCAGGCACATGTGGTaGTCATCGCAATCACAGGCA +
Preference number: 5 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKSRHMW*SSQSQA
Trigger: TGCCTGTGATTGCGATGACAACCACATGTGCCTGGA...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACATGAGCAAGCAGTCATaGGCTGGTCGACCTTCATCT +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYMSKQS*AGRPSS
Trigger: AGATGAAGGTCGACCAGCCAATGACTGCTTGCTCAT...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp TCCAAGAACAAGGCATCTTGGTTTACAAGATTGGTTCTACAGGCCTCAAGACCCTACACAAATATTCCCTaGAATATCATAGACAGGTGC +
Preference number: 5 (lower is better)
Translates to: SKNKASWFTRLVLQASRPYTNIP*NIIDRC
Trigger: GCACCTGTCTATGATATTCAAGGGAATATTTGTGTA...GGGTCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS TCA 90 bp CCGGCAATAGATCAAGAAAAGTGGAGTTATTTCTCTGTCTACCACTaGAGTGATGTTAATTTCCCCAGTGCGAGGATTAATGGTGAATAC +
Preference number: 5 (lower is better)
Translates to: PAIDQEKWSYFSVYH*SDVNFPSARINGEY
Trigger: GTATTCACCATTAATCCTCGCACTGGGGAAATTAACATCACTTCAGTGGTAGACAGAGAAATAACTCCACTTTTCTTGATCTATTGCCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 90 bp GGAACTTCCTTTTATTCCTTCCCGCACACTAAAAGCCATAGTACTTaGATGAAATGCAGGTCCTTCTCTCACATCAACAACTTGAATTCT +
Preference number: 5 (lower is better)
Translates to: GTSFYSFPHTKSHST*MKCRSFSHINNLNS
Trigger: AGAATTCAAGTTGTTGATGTGAGAGAAGGACCTGCATTTCATCCAAGTACTATGGCTTTTAGTGTGCGGGAAGGAATAAAAGGAAGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGACAGAAAGATATGCTTaGAGACACCCTTTTAGGAGG +
Preference number: 5 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVTERYA*RHPFRR
Trigger: CCTCCTAAAAGGGTGTCTCAAAGCATATCTTTCTGT...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACCCTGTGAGATTCAATTaGAGCCCTCGTCTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYPVRFN*SPRLLS
Trigger: ACTGAGAAGACGAGGGCTCAAATTGAATCTCACAGG...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCGATCCACTCCCGCTTTaGTCTTCTGACTGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSDPLPL*SSDCLP
Trigger: TGGCAAACAGTCAGAAGACAAAAGCGGGAGTGGATC...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGGATCCACTCCCGCTTTaGTCTTCTGACTGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKDPLPL*SSDCLP
Trigger: TGGCAAACAGTCAGAAGACAAAAGCGGGAGTGGATC...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACCAGTCTGATCGAATTTaGGCAATGGGGTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYQSDRI*AMGFLF
Trigger: GAAGAGGAACCCCATTGCCAAAATTCGATCAGACTG...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACGGCTGTGTATACACTTaGCGAAAAGACTGGAGCGTT +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYGCVYT*RKDWSV
Trigger: AACGCTCCAGTCTTTTCGCAAAGTGTATACACAGCC...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGGTTGTACATACTGTGTaGCTCTCTGTCCAAGAAACT +
Preference number: 5 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVVVHTV*LSVQET
Trigger: AGTTTCTTGGACAGAGAGCAACACAGTATGTACAAC...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGAGGGGTTGGGTGCATTaGGAATTGAGAAGCAACGGA +
Preference number: 5 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKRGWVH*ELRSNG
Trigger: TCCGTTGCTTCTCAATTCCAAATGCACCCAACCCCT...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGTCAGTCGTGCTACTATaGCTCATGTCAGGCACACCA +
Preference number: 5 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKSVVLL*LMSGTP
Trigger: TGGTGTGCCTGACATGAGCAATAGTAGCACGACTGA...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGTCTTGGTTTACAAGATaGGTTCTACAGGCCTCAAGA +
Preference number: 5 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVSWFTR*VLQASR
Trigger: TCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGA...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGATATCTGGTTGCCAATaGAAAGCTCTACGATTCAGG +
Preference number: 5 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVISGCQ*KALRFR
Trigger: CCTGAATCGTAGAGCTTTCAATTGGCAACCAGATAT...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS GCA 90 bp AGGTACACAAATATTCCCTTGAATATCATAGACAGGTGCCATTACTaGTTCGGTTACTACAACATTGGGTGCAAGCTGAGGATCAAAAAT +
Preference number: 5 (lower is better)
Translates to: RYTNIPLNIIDRCHY*FGYYNIGCKLRIKN
Trigger: ATTTTTGATCCTCAGCTTGCACCCAATGTTGTAGTAACCGAAGCAGTAATGGCACCTGTCTATGATATTCAAGGGAATATTTGTGTACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCAGTCTGATCGAATTTaGGCAATGGGGTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKQSDRI*AMGFLF
Trigger: GAAGAGGAACCCCATTGCCAAAATTCGATCAGACTG...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCGGCTGTGTATACACTTaGCGAAAAGACTGGAGCGTT +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSGCVYT*RKDWSV
Trigger: AACGCTCCAGTCTTTTCGCAAAGTGTATACACAGCC...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCCCTCTCACAACCAGGTaGTACATACTGTGTTGCTCT +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSPLTTR*YILCCS
Trigger: AGAGCAACACAGTATGTACAACCTGGTTGTGAGAGG...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGGTGGGGAAATTATCGTaGACGTCTAAAACCTTGATT +
Preference number: 5 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVVGKLS*TSKTLI
Trigger: AATCAAGGTTTTAGACGTCAACGATAATTTCCCCAC...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCTGGGTGCATTTGGAATaGAGAAGCAACGGAGTAGTG +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSWVHLE*RSNGVV
Trigger: CACTACTCCGTTGCTTCTCAATTCCAAATGCACCCA...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGTGGGTGCATTTGGAATaGAGAAGCAACGGAGTAGTG +
Preference number: 5 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKWVHLE*RSNGVV
Trigger: CACTACTCCGTTGCTTCTCAATTCCAAATGCACCCA...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCGAATTCTCACAGGGGTaGGGTGCATTTGGAATTGAG +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSEFSQG*GAFGIE
Trigger: CTCAATTCCAAATGCACCCAACCCCTGTGAGAATTC...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACTCTCACATCAACAACTaGAATTCTCACAGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYSHINN*NSHRGW
Trigger: CCAACCCCTGTGAGAATTCAAGTTGTTGATGTGAGA...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACGTCCAAGACCAACATTaGAAACTCCAGCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYVQDQH*KLQLGL
Trigger: AAGACCAAGCTGGAGTTTCAAATGTTGGTCTTGGAC...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACGGTTTGTGGATCTGTTaGAATATCGAACCAATTCCC +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYGLWIC*NIEPIP
Trigger: GGGAATTGGTTCGATATTCAAACAGATCCACAAACC...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AAGATTGGTTCTACAGGCCTCAAGACCCATAGGATTCACAATATGAGTTATGTGGTAGTGAAAATCAGCTaGGTTTTTAACTCCGATACT +
Preference number: 5 (lower is better)
Translates to: KIGSTGLKTHRIHNMSYVVVKIS*VFNSDT
Trigger: AGTATCGGAGTTAAAAACCAAGCTGATTTTCACTAC...CACATAACTCATATTGTGAATCCTATGGGTCTTGAGGCCTGTAGAACCAATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACTCTTGGTTTACAAGATaGGTTCTACAGGCCTCAAGA +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYSWFTR*VLQASR
Trigger: TCTTGAGGCCTGTAGAACCAATCTTGTAAACCAAGA...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACAACTACAGAGTGCTTTaGGAGAATATCTGGTTGCCA +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYNYRVL*ENIWLP
Trigger: TGGCAACCAGATATTCTCCAAAAGCACTCTGTAGTT...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS GCA 90 bp CACATAACTTTACTACCAATGTATTGGCATCACTATTTTCTTCAATaGTGGCTGTGTATACACTTTGCGAAAAGACTGGAGCGTTATCAT +
Preference number: 5 (lower is better)
Translates to: HITLLPMYWHHYFLQ*WLCIHFAKRLERYH
Trigger: ATGATAACGCTCCAGTCTTTTCGCAAAGTGTATACACAGCCAGCATTGAAGAAAATAGTGATGCCAATACATTGGTAGTAAAGTTATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 90 bp ACTATTTTCTTCAATGCTGGCTGTGTATACACTTTGCGAAAAGACTaGAGCGTTATCATTTATGTCCATAACTTTGACTCTAAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: TIFFNAGCVYTLRKD*SVIIYVHNFDSKLK
Trigger: CTTGAGCTTAGAGTCAAAGTTATGGACATAAATGATAACGCTCCAGTCTTTTCGCAAAGTGTATACACAGCCAGCATTGAAGAAAATAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCGTTGTACATACTGTGTaGCTCTCTGTCCAAGAAACT +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSVVHTV*LSVQET
Trigger: AGTTTCTTGGACAGAGAGCAACACAGTATGTACAAC...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACTTGACGTCTAAAACCTaGATTCTACAGTCACACTCA +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYLTSKT*ILQSHS
Trigger: TGAGTGTGACTGTAGAATCAAGGTTTTAGACGTCAA...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGGGTTTGTGGATCTGTTaGAATATCGAACCAATTCCC +
Preference number: 5 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKGLWIC*NIEPIP
Trigger: GGGAATTGGTTCGATATTCAAACAGATCCACAAACC...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCTGTCCTTCACCAGGATaGGGATTTCATAAAATCCTG +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSCPSPG*GFHKIL
Trigger: CAGGATTTTATGAAATCCCAATCCTGGTGAAGGACA...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGGTCTGGACTCATCATTaGCATCACTTGAATTTCTGG +
Preference number: 5 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKVWTHH*HHLNFW
Trigger: CCAGAAATTCAAGTGATGCAAATGATGAGTCCAGAC...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCGTCTGGACTCATCATTaGCATCACTTGAATTTCTGG +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSVWTHH*HHLNFW
Trigger: CCAGAAATTCAAGTGATGCAAATGATGAGTCCAGAC...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCATATCTGGTTGCCAATaGAAAGCTCTACGATTCAGG +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSISGCQ*KALRFR
Trigger: CCTGAATCGTAGAGCTTTCAATTGGCAACCAGATAT...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCTTGGAGAATATCTGGTaGCCAATTGAAAGCTCTACG +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSLENIW*PIESST
Trigger: CGTAGAGCTTTCAATTGGCAACCAGATATTCTCCAA...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCAACTACAGAGTGCTTTaGGAGAATATCTGGTTGCCA +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSNYRVL*ENIWLP
Trigger: TGGCAACCAGATATTCTCCAAAAGCACTCTGTAGTT...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGTTTATGTCCATAACTTaGACTCTAAGCTCAAGAGGC +
Preference number: 5 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKFMSIT*TLSSRG
Trigger: GCCTCTTGAGCTTAGAGTCAAAGTTATGGACATAAA...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCTTTATGTCCATAACTTaGACTCTAAGCTCAAGAGGC +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSFMSIT*TLSSRG
Trigger: GCCTCTTGAGCTTAGAGTCAAAGTTATGGACATAAA...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCTTGACGTCTAAAACCTaGATTCTACAGTCACACTCA +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSLTSKT*ILQSHS
Trigger: TGAGTGTGACTGTAGAATCAAGGTTTTAGACGTCAA...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCGTGGGGAAATTATCGTaGACGTCTAAAACCTTGATT +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSVGKLS*TSKTLI
Trigger: AATCAAGGTTTTAGACGTCAACGATAATTTCCCCAC...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACAATGCCTTCATTGGTTaGTGGATCTGTTTGAATATC +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYNAFIG*WICLNI
Trigger: GATATTCAAACAGATCCACAAACCAATGAAGGCATT...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCTGAATGTTAGGTGCTaGTTCATAATCCAGCATCTT +
Preference number: 5 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKLNVRC*FIIQHL
Trigger: AAGATGCTGGATTATGAACAAGCACCTAACATTCAG...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCAATAATTGTAGTGGGTaGCACACATGGATCAGCATT +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSNNCSG*HTWISI
Trigger: AATGCTGATCCATGTGTGCAACCCACTACAATTATT...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACTACACAAATATTCCCTaGAATATCATAGACAGGTGC +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYYTNIP*NIIDRC
Trigger: GCACCTGTCTATGATATTCAAGGGAATATTTGTGTA...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp ATTTTTGGTGGATGTATTGATGATTACAAGGTGCAAGGTCTCCACATAGAATACTTTTTGGTGGATGTATaGATGATTACAAGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: IFGGCIDDYKVQGLHIEYFLVDV*MITRCK
Trigger: CTTGCACCTTGTAATCATCAATACATCCACCAAAAA...GTATTCTATGTGGAGACCTTGCACCTTGTAATCATCAATACATCCACCAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCCAAGAACAAGGCATCTaGGTTTACAAGATTGGTTCT +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSQEQGI*VYKIGS
Trigger: AGAACCAATCTTGTAAACCAAGATGCCTTGTTCTTG...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp AACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGCGTAGTGAAAATCAGCTaGGTTTTTAACTCCGATACT +
Preference number: 5 (lower is better)
Translates to: NHFQPCFQLANSFLIILSVVKIS*VFNSDT
Trigger: AGTATCGGAGTTAAAAACCAAGCTGATTTTCACTAC...GCTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS-3UTR CAA 90 bp GAACCATTTCCAGCCATGCTTTCAGTTGGCAAACTCTTTTCTTATTATATTAAGGTATCTCACCAGTTCTaGAATCAATTTTTAACCAGC +
Preference number: 5 (lower is better)
Translates to: EPFPAMLSVGKLFSYYIKVSHQF*NQFLTS
Trigger: GCTGGTTAAAAATTGATTCAAGAACTGGTGAGATAC...CTTAATATAATAAGAAAAGAGTTTGCCAACTGAAAGCATGGCTGGAAATGGTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS GCA 72 bp CTGGAGTTGCCTGCAGCGCGCATCTGCCTAAAACGCTaGCGCCGCCGTCTGCGGTGCCACCACCACCCGGCA +
Preference number: 6 (lower is better)
Translates to: LELPAARICLKR*RRRLRCHHHPA
Trigger: TGCCGGGTGGTGGTGGCACCGCAGACGGCGGCGGCAGCGTTTTAGGCAGATGCGCGCTGCAGGCAACTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS GCA 72 bp GGTTTAACAGCGCTGGAGTTGCCTGCAGCGCGCATCTaGCTAAAACGCTGCCGCCGCCGTCTGCGGTGCCAC +
Preference number: 6 (lower is better)
Translates to: GLTALELPAARI*LKRCRRRLRCH
Trigger: GTGGCACCGCAGACGGCGGCGGCAGCGTTTTAGGCAGATGCGCGCTGCAGGCAACTCCAGCGCTGTTAAACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS CAA 72 bp GCGGCCATGAGGCCAACGGCTGTCCCCATACCTGTGTaGAGCTCCACTCCCGATACACCTCCTTCCACCGTG +
Preference number: 6 (lower is better)
Translates to: AAMRPTAVPIPV*SSTPDTPPSTV
Trigger: CACGGTGGAAGGAGGTGTATCGGGAGTGGAGCTCAACACAGGTATGGGGACAGCCGTTGGCCTCATGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS GCA 72 bp CTGTCCTCGGGATGGGCCCCTTCAATTCTCCAAGACTaGATCACTCCTTCTCCGCCCTCAGGCACAGGAGCA +
Preference number: 6 (lower is better)
Translates to: LSSGWAPSILQD*ITPSPPSGTGA
Trigger: TGCTCCTGTGCCTGAGGGCGGAGAAGGAGTGATGCAGTCTTGGAGAATTGAAGGGGCCCATCCCGAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 72 bp CACCTCCTTCCACCGTGCCCCCGGCTGCATAGGTGTTaGTGTAGATTTCAGAGGAATCCATCCGATCCTGGG +
Preference number: 6 (lower is better)
Translates to: HLLPPCPRLHRC*CRFQRNPSDPG
Trigger: CCCAGGATCGGATGGATTCCTCTGAAATCTACACCAACACCTATGCAGCCGGGGGCACGGTGGAAGGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS GCA 72 bp GCCCATACGTGTCACCAGTTATGTCCTCTGTGTAGATaGCCGCGGCACCAGAGTCCAGGCACATGTGGTTGT +
Preference number: 6 (lower is better)
Translates to: AHTCHQLCPLCR*PRHQSPGTCGC
Trigger: ACAACCACATGTGCCTGGACTCTGGTGCCGCGGGCATCTACACAGAGGACATAACTGGTGACACGTATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 72 bp CTGAAAAGGGAGGATGTTGGTTTAACAGCGCTGGAGTaGCCTGCAGCGCGCATCTGCCTAAAACGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: LKREDVGLTALE*PAARICLKRCR
Trigger: GCGGCAGCGTTTTAGGCAGATGCGCGCTGCAGGCAACTCCAGCGCTGTTAAACCAACATCCTCCCTTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS CAA 90 bp TGTAGATTTCTGAAAAGGGAGGATGTTGGTTTAACAGCGCTGGAGTaGCCTGCAGCGCGCATCTGCCTAAAACGCTGCCGCCGCCGTCTG +
Preference number: 6 (lower is better)
Translates to: CRFLKREDVGLTALE*PAARICLKRCRRRL
Trigger: CAGACGGCGGCGGCAGCGTTTTAGGCAGATGCGCGCTGCAGGCAACTCCAGCGCTGTTAAACCAACATCCTCCCTTTTCAGAAATCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS GCA 72 bp CACTCCCGATACACCTCCTTCCACCGTGCCCCCGGCTaGATAGGTGTTGGTGTAGATTTCAGAGGAATCCAT +
Preference number: 6 (lower is better)
Translates to: HSRYTSFHRAPG*IGVGVDFRGIH
Trigger: ATGGATTCCTCTGAAATCTACACCAACACCTATGCAGCCGGGGGCACGGTGGAAGGAGGTGTATCGGGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS GCA 72 bp GGAGCAGCAAGAGTGGAGCCAAAATCAGTAGCAGGATaGCCAGAACCATCATGCCAATCCCTGCTGGTCCAA +
Preference number: 6 (lower is better)
Translates to: GAARVEPKSVAG*PEPSCQSLLVQ
Trigger: TTGGACCAGCAGGGATTGGCATGATGGTTCTGGGCATCCTGCTACTGATTTTGGCTCCACTCTTGCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS GCA 72 bp CGAGAAGTAGCTGTCCAAGAAAGCCATGTTGATGTCTaGGTCAGCGTAGTCCCGCAGGGTTCCCATGGTAGA +
Preference number: 6 (lower is better)
Translates to: REVAVQESHVDV*VSVVPQGSHGR
Trigger: TCTACCATGGGAACCCTGCGGGACTACGCTGACGCAGACATCAACATGGCTTTCTTGGACAGCTACTTCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 72 bp ATCGTGTTACTCTGTGTCGAGATGTCATGGGGGATGTaGAGCCAACGGTTTGGCCTATGGGAAGGTCTGGAC +
Preference number: 6 (lower is better)
Translates to: IVLLCVEMSWGM*SQRFGLWEGLD
Trigger: GTCCAGACCTTCCCATAGGCCAAACCGTTGGCTCCACATCCCCCATGACATCTCGACACAGAGTAACACGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 90 bp TTGCCGCTCATCACAGGTCCCATACAACCCTCAGTCGTGCTACTATaGCTCATGTCAGGCACACCAGGACTAGCCAGTACTCTCTCAGCA +
Preference number: 6 (lower is better)
Translates to: LPLITGPIQPSVVLL*LMSGTPGLASTLSA
Trigger: TGCTGAGAGAGTACTGGCTAGTCCTGGTGTGCCTGACATGAGCAATAGTAGCACGACTGAGGGTTGTATGGGACCTGTGATGAGCGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 72 bp TGTCGAGATGTCATGGGGGATGTGGAGCCAACGGTTTaGCCTATGGGAAGGTCTGGACTCATCATTTGCATC +
Preference number: 6 (lower is better)
Translates to: CRDVMGDVEPTV*PMGRSGLIICI
Trigger: GATGCAAATGATGAGTCCAGACCTTCCCATAGGCCAAACCGTTGGCTCCACATCCCCCATGACATCTCGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 72 bp CACCTCCTTCCACCGTGCCCCCGGCTGCATAGGTGTTaGTGTAGATTTCTGAAAAGGGAGGATGTTGGTTTA +
Preference number: 6 (lower is better)
Translates to: HLLPPCPRLHRC*CRFLKREDVGL
Trigger: TAAACCAACATCCTCCCTTTTCAGAAATCTACACCAACACCTATGCAGCCGGGGGCACGGTGGAAGGAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359747.4
CDS CAA 72 bp GTGTCGAGATGTCATGGGGGATGTGGAGCCAACGGTTaGGCCTATGGGAAGGTCTGGACTCATCATTTGCAT +
Preference number: 6 (lower is better)
Translates to: VSRCHGGCGANG*AYGKVWTHHLH
Trigger: ATGCAAATGATGAGTCCAGACCTTCCCATAGGCCAAACCGTTGGCTCCACATCCCCCATGACATCTCGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS TCA 72 bp CTCAGAAGACAGTCCATCTGCAGCTCCATCCCGATCTaGGCCTCTCACAACCAGGTTGTACATACTGTGTTG +
Preference number: 6 (lower is better)
Translates to: LRRQSICSSIPI*ASHNQVVHTVL
Trigger: CAACACAGTATGTACAACCTGGTTGTGAGAGGCTCAGATCGGGATGGAGCTGCAGATGGACTGTCTTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 72 bp GGATGTGGAGCCAACGGTTTGGCCTATGGGAAGGTCTaGACTCATCATTTGCATCACTTGAATTTCTGGCCC +
Preference number: 6 (lower is better)
Translates to: GCGANGLAYGKV*THHLHHLNFWP
Trigger: GGGCCAGAAATTCAAGTGATGCAAATGATGAGTCCAGACCTTCCCATAGGCCAAACCGTTGGCTCCACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 72 bp ATCACAGGTCCCATACAACCCTCAGTCGTGCTACTATaGCTCATGTCAGGCACACCAGGACTAGCCAGTACT +
Preference number: 6 (lower is better)
Translates to: ITGPIQPSVVLL*LMSGTPGLAST
Trigger: AGTACTGGCTAGTCCTGGTGTGCCTGACATGAGCAATAGTAGCACGACTGAGGGTTGTATGGGACCTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 72 bp AGGAATCCATCCGATCCTGGGTATTTGAGGCTGTCATaGGTGCACATATATTTGACACATCCCTGTCCTCGG +
Preference number: 6 (lower is better)
Translates to: RNPSDPGYLRLS*VHIYLTHPCPR
Trigger: CCGAGGACAGGGATGTGTCAAATATATGTGCACCCATGACAGCCTCAAATACCCAGGATCGGATGGATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS CCA 72 bp ATGTCATGGGGGATGTGGAGCCAACGGTTTGGCCTATaGGAAGGTCTGGACTCATCATTTGCATCACTTGAA +
Preference number: 6 (lower is better)
Translates to: MSWGMWSQRFGL*EGLDSSFASLE
Trigger: TTCAAGTGATGCAAATGATGAGTCCAGACCTTCCCATAGGCCAAACCGTTGGCTCCACATCCCCCATGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 72 bp TGTTACTGTATCGTGTTACTCTGTGTCGAGATGTCATaGGGGATGTGGAGCCAACGGTTTGGCCTATGGGAA +
Preference number: 6 (lower is better)
Translates to: CYCIVLLCVEMS*GMWSQRFGLWE
Trigger: TTCCCATAGGCCAAACCGTTGGCTCCACATCCCCCATGACATCTCGACACAGAGTAACACGATACAGTAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 90 bp TGTTACTCTGTGTCGAGATGTCATGGGGGATGTGGAGCCAACGGTTaGGCCTATGGGAAGGTCTGGACTCATCATTTGCATCACTTGAAT +
Preference number: 6 (lower is better)
Translates to: CYSVSRCHGGCGANG*AYGKVWTHHLHHLN
Trigger: ATTCAAGTGATGCAAATGATGAGTCCAGACCTTCCCATAGGCCAAACCGTTGGCTCCACATCCCCCATGACATCTCGACACAGAGTAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS TCA 72 bp CAAGACCAACATTTGAAACTCCAGCTTGGTCTTCAGTaGCAGGCCCATACGTGTCACCAGTTATGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: QDQHLKLQLGLQ*QAHTCHQLCPL
Trigger: CAGAGGACATAACTGGTGACACGTATGGGCCTGTCACTGAAGACCAAGCTGGAGTTTCAAATGTTGGTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 90 bp AGGTGTTGGTGTAGATTTCAGAGGAATCCATCCGATCCTGGGTATTaGAGGCTGTCATGGGTGCACATATATTTGACACATCCCTGTCCT +
Preference number: 6 (lower is better)
Translates to: RCWCRFQRNPSDPGY*RLSWVHIYLTHPCP
Trigger: AGGACAGGGATGTGTCAAATATATGTGCACCCATGACAGCCTCAAATACCCAGGATCGGATGGATTCCTCTGAAATCTACACCAACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS CAA 72 bp GGGTTTCTCTTGCACGCAAATCCTGTGAGATTCAATTaGAGCCCTCGTCTTCTCAGTTCCGAATTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: GFLLHANPVRFN*SPRLLSSEFCS
Trigger: AGAGCAGAATTCGGAACTGAGAAGACGAGGGCTCAAATTGAATCTCACAGGATTTGCGTGCAAGAGAAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS GCA 72 bp TTTGCATCACTTGAATTTCTGGCCCTACTAAAATATTaGCGCTCATCACAGGTCCCATACAACCCTCAGTCG +
Preference number: 6 (lower is better)
Translates to: FASLEFLALLKY*RSSQVPYNPQS
Trigger: CGACTGAGGGTTGTATGGGACCTGTGATGAGCGGCAATATTTTAGTAGGGCCAGAAATTCAAGTGATGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 72 bp GGTTGTACATACTGTGTTGCTCTCTGTCCAAGAAACTaGACATGGTGCAGACTTCTCCAGTGTACCTATTCA +
Preference number: 6 (lower is better)
Translates to: GCTYCVALCPRN*TWCRLLQCTYS
Trigger: TGAATAGGTACACTGGAGAAGTCTGCACCATGTCCAGTTTCTTGGACAGAGAGCAACACAGTATGTACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 90 bp CATTCCTTTGGGTTTCTCTTGCACGCAAATCCTGTGAGATTCAATTaGAGCCCTCGTCTTCTCAGTTCCGAATTCTGCTCTACAGAAAGA +
Preference number: 6 (lower is better)
Translates to: HSFGFLLHANPVRFN*SPRLLSSEFCSTER
Trigger: TCTTTCTGTAGAGCAGAATTCGGAACTGAGAAGACGAGGGCTCAAATTGAATCTCACAGGATTTGCGTGCAAGAGAAACCCAAAGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS CAA 90 bp GCAAATGTTTCTGAAGAAGAGCCAATCCATTCCTTTGGGTTTCTCTaGCACGCAAATCCTGTGAGATTCAATTTGAGCCCTCGTCTTCTC +
Preference number: 6 (lower is better)
Translates to: ANVSEEEPIHSFGFL*HANPVRFNLSPRLL
Trigger: GAGAAGACGAGGGCTCAAATTGAATCTCACAGGATTTGCGTGCAAGAGAAACCCAAAGGAATGGATTGGCTCTTCTTCAGAAACATTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS TCA 72 bp CCTATGGGAAGGTCTGGACTCATCATTTGCATCACTTaGATTTCTGGCCCTACTAAAATATTGCCGCTCATC +
Preference number: 6 (lower is better)
Translates to: PMGRSGLIICIT*ISGPTKILPLI
Trigger: GATGAGCGGCAATATTTTAGTAGGGCCAGAAATTCAAGTGATGCAAATGATGAGTCCAGACCTTCCCATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 72 bp TCTGAAGAAGAGCCAATCCATTCCTTTGGGTTTCTCTaGCACGCAAATCCTGTGAGATTCAATTTGAGCCCT +
Preference number: 6 (lower is better)
Translates to: SEEEPIHSFGFL*HANPVRFNLSP
Trigger: AGGGCTCAAATTGAATCTCACAGGATTTGCGTGCAAGAGAAACCCAAAGGAATGGATTGGCTCTTCTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS CAA 72 bp CTTCTCTCACATCAACAACTTGAATTCTCACAGGGGTaGGGTGCATTTGGAATTGAGAAGCAACGGAGTAGT +
Preference number: 6 (lower is better)
Translates to: LLSHQQLEFSQG*GAFGIEKQRSS
Trigger: ACTACTCCGTTGCTTCTCAATTCCAAATGCACCCAACCCCTGTGAGAATTCAAGTTGTTGATGTGAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 72 bp GGGTGCAAGCTGAGGATCAAAAATAATTGTAGTGGGTaGCACACATGGATCAGCATTACCGTAAGTCTCAGT +
Preference number: 6 (lower is better)
Translates to: GCKLRIKNNCSG*HTWISITVSLS
Trigger: ACTGAGACTTACGGTAATGCTGATCCATGTGTGCAACCCACTACAATTATTTTTGATCCTCAGCTTGCACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS GCA 72 bp AGGTGCCATTACTGCTTCGGTTACTACAACATTGGGTaGAAGCTGAGGATCAAAAATAATTGTAGTGGGTTG +
Preference number: 6 (lower is better)
Translates to: RCHYCFGYYNIG*KLRIKNNCSGL
Trigger: CAACCCACTACAATTATTTTTGATCCTCAGCTTGCACCCAATGTTGTAGTAACCGAAGCAGTAATGGCACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS GCA 72 bp AATATTCCCTTGAATATCATAGACAGGTGCCATTACTaGTTCGGTTACTACAACATTGGGTGCAAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: NIPLNIIDRCHY*FGYYNIGCKLR
Trigger: CCTCAGCTTGCACCCAATGTTGTAGTAACCGAAGCAGTAATGGCACCTGTCTATGATATTCAAGGGAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 72 bp AACTTGAATTCTCACAGGGGTTGGGTGCATTTGGAATaGAGAAGCAACGGAGTAGTGAAAATCAGCTTGGTT +
Preference number: 6 (lower is better)
Translates to: NLNSHRGWVHLE*RSNGVVKISLV
Trigger: AACCAAGCTGATTTTCACTACTCCGTTGCTTCTCAATTCCAAATGCACCCAACCCCTGTGAGAATTCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 72 bp ATCAACAACTTGAATTCTCACAGGGGTTGGGTGCATTaGGAATTGAGAAGCAACGGAGTAGTGAAAATCAGC +
Preference number: 6 (lower is better)
Translates to: INNLNSHRGWVH*ELRSNGVVKIS
Trigger: GCTGATTTTCACTACTCCGTTGCTTCTCAATTCCAAATGCACCCAACCCCTGTGAGAATTCAAGTTGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 72 bp TGTAGATTTCAGAGGAATCCATCCGATCCTGGGTATTaGAGGCTGTCATGGGTGCACATATATTTGACACAT +
Preference number: 6 (lower is better)
Translates to: CRFQRNPSDPGY*RLSWVHIYLTH
Trigger: ATGTGTCAAATATATGTGCACCCATGACAGCCTCAAATACCCAGGATCGGATGGATTCCTCTGAAATCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS CAA 90 bp GGTGCAAGGTCTCCACATAGAATACTGACCATAAAGCACTTACTGTaGGGTGTAATGTATGTTACTGTATCGTGTTACTCTGTGTCGAGA +
Preference number: 6 (lower is better)
Translates to: GARSPHRILTIKHLL*GVMYVTVSCYSVSR
Trigger: TCTCGACACAGAGTAACACGATACAGTAACATACATTACACCCAACAGTAAGTGCTTTATGGTCAGTATTCTATGTGGAGACCTTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS GCA 72 bp TTCAATTTGAGCCCTCGTCTTCTCAGTTCCGAATTCTaGTCTACAGAAAGATATGCTTTGAGACACCCTTTT +
Preference number: 6 (lower is better)
Translates to: FNLSPRLLSSEF*STERYALRHPF
Trigger: AAAAGGGTGTCTCAAAGCATATCTTTCTGTAGAGCAGAATTCGGAACTGAGAAGACGAGGGCTCAAATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308128.9
CDS GCA 72 bp AGGTACACAAATATTCCCTTGAATATCATAGACAGGTaGCATTACTGCTTCGGTTACTACAACATTGGGTGC +
Preference number: 6 (lower is better)
Translates to: RYTNIPLNIIDR*HYCFGYYNIGC
Trigger: GCACCCAATGTTGTAGTAACCGAAGCAGTAATGGCACCTGTCTATGATATTCAAGGGAATATTTGTGTACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 72 bp CTACCAATGTATTGGCATCACTATTTTCTTCAATGCTaGCTGTGTATACACTTTGCGAAAAGACTGGAGCGT +
Preference number: 6 (lower is better)
Translates to: LPMYWHHYFLQC*LCIHFAKRLER
Trigger: ACGCTCCAGTCTTTTCGCAAAGTGTATACACAGCCAGCATTGAAGAAAATAGTGATGCCAATACATTGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 90 bp ACACTTTGCGAAAAGACTGGAGCGTTATCATTTATGTCCATAACTTaGACTCTAAGCTCAAGAGGCCTTTCTAAATCTTCACCCCGTGAA +
Preference number: 6 (lower is better)
Translates to: TLCEKTGALSFMSIT*TLSSRGLSKSSPRE
Trigger: TTCACGGGGTGAAGATTTAGAAAGGCCTCTTGAGCTTAGAGTCAAAGTTATGGACATAAATGATAACGCTCCAGTCTTTTCGCAAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 90 bp TGGGTGCATTTGGAATTGAGAAGCAACGGAGTAGTGAAAATCAGCTaGGTTTTTAACTCCGATACTAAGCTGAATGTTAGGTGCTTGTTC +
Preference number: 6 (lower is better)
Translates to: WVHLELRSNGVVKIS*VFNSDTKLNVRCLF
Trigger: GAACAAGCACCTAACATTCAGCTTAGTATCGGAGTTAAAAACCAAGCTGATTTTCACTACTCCGTTGCTTCTCAATTCCAAATGCACCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 90 bp TTCTCTCACATCAACAACTTGAATTCTCACAGGGGTTGGGTGCATTaGGAATTGAGAAGCAACGGAGTAGTGAAAATCAGCTTGGTTTTT +
Preference number: 6 (lower is better)
Translates to: FSHINNLNSHRGWVH*ELRSNGVVKISLVF
Trigger: AAAAACCAAGCTGATTTTCACTACTCCGTTGCTTCTCAATTCCAAATGCACCCAACCCCTGTGAGAATTCAAGTTGTTGATGTGAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 90 bp TACAACATTGGGTGCAAGCTGAGGATCAAAAATAATTGTAGTGGGTaGCACACATGGATCAGCATTACCGTAAGTCTCAGTCACAATAAT +
Preference number: 6 (lower is better)
Translates to: YNIGCKLRIKNNCSG*HTWISITVSLSHNN
Trigger: ATTATTGTGACTGAGACTTACGGTAATGCTGATCCATGTGTGCAACCCACTACAATTATTTTTGATCCTCAGCTTGCACCCAATGTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS TCA 72 bp ATTACTGCTTCGGTTACTACAACATTGGGTGCAAGCTaGGGATCAAAAATAATTGTAGTGGGTTGCACACAT +
Preference number: 6 (lower is better)
Translates to: ITASVTTTLGAS*GSKIIVVGCTH
Trigger: ATGTGTGCAACCCACTACAATTATTTTTGATCCTCAGCTTGCACCCAATGTTGTAGTAACCGAAGCAGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS GCA 72 bp GTTCTTGAATCAATTTTTAACCAGCTGCCTGCATCATaGCCTATGATATATCTGACATCTGTTGCAGGGTTT +
Preference number: 6 (lower is better)
Translates to: VLESIFNQLPAS*PMIYLTSVAGF
Trigger: AAACCCTGCAACAGATGTCAGATATATCATAGGGCATGATGCAGGCAGCTGGTTAAAAATTGATTCAAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 72 bp TTCAATGCTGGCTGTGTATACACTTTGCGAAAAGACTaGAGCGTTATCATTTATGTCCATAACTTTGACTCT +
Preference number: 6 (lower is better)
Translates to: FNAGCVYTLRKD*SVIIYVHNFDS
Trigger: AGAGTCAAAGTTATGGACATAAATGATAACGCTCCAGTCTTTTCGCAAAGTGTATACACAGCCAGCATTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CCA 72 bp CTGAGGATCAAAAATAATTGTAGTGGGTTGCACACATaGATCAGCATTACCGTAAGTCTCAGTCACAATAAT +
Preference number: 6 (lower is better)
Translates to: LRIKNNCSGLHT*ISITVSLSHNN
Trigger: ATTATTGTGACTGAGACTTACGGTAATGCTGATCCATGTGTGCAACCCACTACAATTATTTTTGATCCTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 72 bp TTGGAATTGAGAAGCAACGGAGTAGTGAAAATCAGCTaGGTTTTTAACTCCGATACTAAGCTGAATGTTAGG +
Preference number: 6 (lower is better)
Translates to: LELRSNGVVKIS*VFNSDTKLNVR
Trigger: CCTAACATTCAGCTTAGTATCGGAGTTAAAAACCAAGCTGATTTTCACTACTCCGTTGCTTCTCAATTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS GCA 72 bp TCACTATTTTCTTCAATGCTGGCTGTGTATACACTTTaGGAAAAGACTGGAGCGTTATCATTTATGTCCATA +
Preference number: 6 (lower is better)
Translates to: SLFSSMLAVYTL*EKTGALSFMSI
Trigger: TATGGACATAAATGATAACGCTCCAGTCTTTTCGCAAAGTGTATACACAGCCAGCATTGAAGAAAATAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 72 bp ATCACTATTTTCTTCAATGCTGGCTGTGTATACACTTaGCGAAAAGACTGGAGCGTTATCATTTATGTCCAT +
Preference number: 6 (lower is better)
Translates to: ITIFFNAGCVYT*RKDWSVIIYVH
Trigger: ATGGACATAAATGATAACGCTCCAGTCTTTTCGCAAAGTGTATACACAGCCAGCATTGAAGAAAATAGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 72 bp CCAACCAGTTATCAGTGCCTTCTTCATCAAGATCAATaGCTTGTAATCGTATCAGTTCCGAACTTAAACAAT +
Preference number: 6 (lower is better)
Translates to: PTSYQCLLHQDQ*LVIVSVPNLNN
Trigger: ATTGTTTAAGTTCGGAACTGATACGATTACAAGCAATTGATCTTGATGAAGAAGGCACTGATAACTGGTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 72 bp TCTCCACATAGAATACTGACCATAAAGCACTTACTGTaGGGTGTAATGTATGTTACTGTATCGTGTTACTCT +
Preference number: 6 (lower is better)
Translates to: SPHRILTIKHLL*GVMYVTVSCYS
Trigger: AGAGTAACACGATACAGTAACATACATTACACCCAACAGTAAGTGCTTTATGGTCAGTATTCTATGTGGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 90 bp AATATTGAGCCAACCAGTTATCAGTGCCTTCTTCATCAAGATCAATaGCTTGTAATCGTATCAGTTCCGAACTTAAACAATTCTCTTCAA +
Preference number: 6 (lower is better)
Translates to: NIEPTSYQCLLHQDQ*LVIVSVPNLNNSLQ
Trigger: TTGAAGAGAATTGTTTAAGTTCGGAACTGATACGATTACAAGCAATTGATCTTGATGAAGAAGGCACTGATAACTGGTTGGCTCAATATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4
CDS CAA 72 bp GTTTTTAACTCCGATACTAAGCTGAATGTTAGGTGCTaGTTCATAATCCAGCATCTTGACAACTTTCAAAAT +
Preference number: 6 (lower is better)
Translates to: VFNSDTKLNVRC*FIIQHLDNFQN
Trigger: ATTTTGAAAGTTGTCAAGATGCTGGATTATGAACAAGCACCTAACATTCAGCTTAGTATCGGAGTTAAAAAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308128.9
ENST00000359747.4