RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DSG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000046604

Ensembl transcript IDs: ENST00000261590.13, ENST00000585206.1, ENST00000682087.1, ENST00000682241.1, ENST00000683614.1, ENST00000683654.1, ENST00000684461.1

Found 272 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCAATaGGTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAG +
Preference number: 1 (lower is better)
Translates to: STIAGAQTVHVSLDQ*VVESLLGAVKYRIQ
Trigger: CTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAACTCATTGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR GCA 90 bp AACGTGCATACAGCACATTACAATTTGGGCCAGTCACATTTTAAGTaGTCAATAGTCACATGGCCCATATTGGACAGCACATCCCTAAAA +
Preference number: 1 (lower is better)
Translates to: NVHTAHYNLGQSHFK*SIVTWPILDSTSLK
Trigger: TTTTAGGGATGTGCTGTCCAATATGGGCCATGTGACTATTGAGCACTTAAAATGTGACTGGCCCAAATTGTAATGTGCTGTATGCACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585206.1
3UTR CCA 90 bp CATTACAATTTGGGCCAGTCACATTTTAAGTGCTCAATAGTCACATaGCCCATATTGGACAGCACATCCCTAAAAGAGAGTAATTCCAAG +
Preference number: 1 (lower is better)
Translates to: HYNLGQSHFKCSIVT*PILDSTSLKESNSK
Trigger: CTTGGAATTACTCTCTTTTAGGGATGTGCTGTCCAATATGGGCCATGTGACTATTGAGCACTTAAAATGTGACTGGCCCAAATTGTAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585206.1
3UTR TCA 90 bp GTGTATTCTTATCATCAATGGTCCAATTTAATGAATCACACAGATTaGAAGGGTTCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGT +
Preference number: 1 (lower is better)
Translates to: VYSYHQWSNLMNHTD*KGSSLKEVMSTIAG
Trigger: ACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGAACCCTTTCAATCTGTGTGATTCATTAAATTGGACCATTGATGATAAGAATACAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR-3UTR TCA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTAACTCCTGACCACAGTTaGTCCACCCGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLTPDHS*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCAACTGTGGTCAGGAGT...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR-3UTR GCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGTTGCCCAGACTGGAGTaGAATGGTGCGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVLPRLE*NGAISA
Trigger: AGCCGAGATCGCACCATTGCACTCCAGTCTGGGCAA...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR-3UTR CCA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCAACCCAGTCAGTTTCCTaGGTTGCTTTACTGGACGGC +
Preference number: 2 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSTQSVS*VALLDG
Trigger: GCCGTCCAGTAAAGCAACCCAGGAAACTGACTGGGT...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR-3UTR GCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGGTCAGTTTCCTGGGTTaGTTTACTGGACGGCTGATG +
Preference number: 2 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVVSFLG*FTGRLM
Trigger: CATCAGCCGTCCAGTAAAGCAACCCAGGAAACTGAC...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR-3UTR CCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGCCTGGGTTGCTTTACTaGACGGCTGATGAACTAGGT +
Preference number: 2 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVPGLLY*TADELG
Trigger: ACCTAGTTCATCAGCCGTCCAGTAAAGCAACCCAGG...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR-3UTR TCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCCCAGGTTGGCCTGGCTaGTCTCAAACTCCTGACCAC +
Preference number: 2 (lower is better)
Translates to: LKICVLICTVSGSTLYKSPGWPG*SQTPDH
Trigger: GTGGTCAGGAGTTTGAGATCAGCCAGGCCAACCTGG...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR-3UTR TCA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTAGGATCAATGAGTTGTTaGAAGTCTGCTGGGTGCAGT +
Preference number: 2 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVGSMSC*KSAGCS
Trigger: ACTGCACCCAGCAGACTTTCAACAACTCATTGATCC...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR-3UTR CCA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTATATGAGCACCATAGCTaGTGCTCAGACTGTGCATGT +
Preference number: 2 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLYEHHS*CSDCAC
Trigger: ACATGCACAGTCTGAGCACCAGCTATGGTGCTCATA...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR CAA 90 bp TTGGGCCAGTCACATTTTAAGTGCTCAATAGTCACATGGCCCATATaGGACAGCACATCCCTAAAAGAGAGTAATTCCAAGAGTTATCCT +
Preference number: 2 (lower is better)
Translates to: LGQSHFKCSIVTWPI*DSTSLKESNSKSYP
Trigger: AGGATAACTCTTGGAATTACTCTCTTTTAGGGATGTGCTGTCCAATATGGGCCATGTGACTATTGAGCACTTAAAATGTGACTGGCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585206.1
3UTR-3UTR TCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGGTATCTTTGGATCAATaGGTTGTTGAAAGTCTGCTG +
Preference number: 2 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVVSLDQ*VVESLL
Trigger: CAGCAGACTTTCAACAACTCATTGATCCAAAGATAC...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR-3UTR CCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGTGTTCAGAATTTTCATaGCGGTTGAGACAAGGAAGA +
Preference number: 2 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVCSEFS*RLRQGR
Trigger: TCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACA...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR-3UTR GCA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTGACAGTGTGGTCCTTTaGATATCAGTGACTGAGAAA +
Preference number: 2 (lower is better)
Translates to: VVESLLGAVKYRIQNINVDSVVL*ISVTEK
Trigger: TTTCTCAGTCACTGATATGCAAAGGACCACACTGTC...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR-3UTR CCA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTATTTCTAAAATACTCCTaGAAGCAGAGACAGTGTGGT +
Preference number: 2 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLFLKYS*KQRQCG
Trigger: ACCACACTGTCTCTGCTTCCAGGAGTATTTTAGAAA...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR-3UTR CAA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGCGGGGTTTCACCAGGTaGGCCTGGCTGATCTCAAAC +
Preference number: 3 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVRGFTR*AWLISN
Trigger: GTTTGAGATCAGCCAGGCCAACCTGGTGAAACCCCG...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR-3UTR CAA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTAAGTCAGTTTCCTGGGTaGCTTTACTGGACGGCTGAT +
Preference number: 3 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVSQFPG*LYWTAD
Trigger: ATCAGCCGTCCAGTAAAGCAACCCAGGAAACTGACT...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR TCA 72 bp GCTGGTGCTCAGACTGTGCATGTATCTTTGGATCAATaGGTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTAC +
Preference number: 3 (lower is better)
Translates to: AGAQTVHVSLDQ*VVESLLGAVKY
Trigger: GTACTTTACTGCACCCAGCAGACTTTCAACAACTCATTGATCCAAAGATACATGCACAGTCTGAGCACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR TCA 72 bp TTGGCACCCATGTTAGGCACTGAGGCTACACAGCAGTaGAATAGGCCTAGTTGTTCTCAACTAGAGAACATA +
Preference number: 3 (lower is better)
Translates to: LAPMLGTEATQQ*NRPSCSQLENI
Trigger: TATGTTCTCTAGTTGAGAACAACTAGGCCTATTTCACTGCTGTGTAGCCTCAGTGCCTAACATGGGTGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR GCA 72 bp ACAGCACATTACAATTTGGGCCAGTCACATTTTAAGTaGTCAATAGTCACATGGCCCATATTGGACAGCACA +
Preference number: 3 (lower is better)
Translates to: TAHYNLGQSHFK*SIVTWPILDST
Trigger: TGTGCTGTCCAATATGGGCCATGTGACTATTGAGCACTTAAAATGTGACTGGCCCAAATTGTAATGTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585206.1
3UTR-3UTR CAA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTATTCTCAGAAGCCAGATaGACTCTCTATGTATCTTGT +
Preference number: 3 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLFSEAR*TLYVSC
Trigger: ACAAGATACATAGAGAGTCAATCTGGCTTCTGAGAA...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR-3UTR CAA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCAGGTACTCTGTTCACTaGGTAAATTCTCAGAAGCCA +
Preference number: 3 (lower is better)
Translates to: LKICVLICTVSGSTLYKSRYSVH*VNSQKP
Trigger: TGGCTTCTGAGAATTTACCAAGTGAACAGAGTACCT...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCGAGCCACGGGGGCGGTaGTCCAGGCGCGCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACEPRGR*SRRAFA
Trigger: GGCAAAAGCGCGCCTGGATCACCGCCCCCGTGGCTC...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGGCAACAGCAGCTGCCTaGGCTCCGGCCATGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVATAAA*APAMSL
Trigger: CAGAGACATGGCCGGAGCTCAGGCAGCTGCTGTTGC...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCACTCTGGAAGCCCCTGTaGCCCTTGCGGTCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSLWKPL*PLRSSW
Trigger: CCACGAAGACCGCAAGGGCCACAGGGGCTTCCAGAG...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGAGTAGGCTGCACACCTaGGCTGGGGGCAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVSRLHT*AGGKEA
Trigger: AGCTTCCTTGCCCCCAGCTCAGGTGTGCAGCCTACT...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCACAGTGCAACAGCAGCTaGCTGAGCTCCGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSQCNSS*LSSGHV
Trigger: GACATGGCCGGAGCTCAGGCAGCTGCTGTTGCACTG...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGCCAGGTTGGCCTGGCTaGTCTCAAACTCCTGACCAC +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVPGWPG*SQTPDH
Trigger: GTGGTCAGGAGTTTGAGATCAGCCAGGCCAACCTGG...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTACATGCTGTGCTTCCCTaGAGCCGCTGCCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVHAVLP*SRCHAD
Trigger: GTCTGCATGGCAGCGGCTGCAGGGAAGCACAGCATG...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGATAGGAGTCATGCTGTaGTTCCCTGCAGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVIGVML*FPAAAA
Trigger: GGCAGCGGCTGCAGGGAAGCACAGCATGACTCCTAT...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTAGCTGCACACCTGAGCTaGGGGCAAGGAAGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVAAHLS*GQGSSL
Trigger: GAGAGAGCTTCCTTGCCCCCAGCTCAGGTGTGCAGC...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTAAATCATGAGCGCAATTaGTGCGGGTCCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVNHERN*CGSQAH
Trigger: GTGGGCCTGGGACCCGCAGCAATTGCGCTCATGATT...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCACTCCTGACCACAGTTaGTCCACCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LKICVLICTVSGSTLYKSTPDHS*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCAACTGTGGTCAGGAGT...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCATGGCCAGAGTAGGCTaGACACCTGAGCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACMARVG*TPELGA
Trigger: TGCCCCCAGCTCAGGTGTGCAGCCTACTCTGGCCAT...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTAGAAAGGGCCACTGTTTaGGTGTCCATCCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVERATV*VSIQVL
Trigger: GAGGACCTGGATGGACACCCAAACAGTGGCCCTTTC...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCAGTGGCCCCTGTAAACTaGGTAGCTCTACCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSVAPVN*VALPES
Trigger: GCTTTCTGGTAGAGCTACCCAGTTTACAGGGGCCAC...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCCTCCGGCCATGTCTCTaGAAGCCCCTGTGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LKICVLICTVSGSTLYKSLRPCL*KPLWPL
Trigger: CAAGGGCCACAGGGGCTTCCAGAGACATGGCCGGAG...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCAGATCACAGTGGTTGGTaGCATAGTGGACCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSDHSGW*HSGPCD
Trigger: GTCACAGGGTCCACTATGCCACCAACCACTGTGATC...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCAATAAGGCTCTGTGGCTaGCTAGGACCCAGGATCACA +
Preference number: 4 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSIRLCG*LGPRIT
Trigger: TGTGATCCTGGGTCCTAGCCAGCCACAGAGCCTTAT...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTACTGCAGCCGCTGCCATaGAGACACTCACAAACTGTG +
Preference number: 4 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLLQPLP*RHSQTV
Trigger: CACAGTTTGTGAGTGTCTGCATGGCAGCGGCTGCAG...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCCATGAGCGCAATTGCTaGGGGTCCCAGGCCCACATA +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACHERNC*GSQAHI
Trigger: TATGTGGGCCTGGGACCCGCAGCAATTGCGCTCATG...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGTTCTTCCTACTAGACTaGCCCCTTGATCCACTGGCA +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVFFLLD*PLDPLA
Trigger: TGCCAGTGGATCAAGGGGGCAGTCTAGTAGGAAGAA...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGGGTGTAGCTACCTTTTaGGCCTGCCTAGAAGACACA +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVGVATF*ACLEDT
Trigger: TGTGTCTTCTAGGCAGGCGCAAAAGGTAGCTACACC...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTATTGCCCAGACTGGAGTaGAATGGTGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLLPRLE*NGAISA
Trigger: AGCCGAGATCGCACCATTGCACTCCAGTCTGGGCAA...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTAATCCACTGGCAGAAATaGTGGCACCACCTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVIHWQK*WHHLVF
Trigger: GAAGACAAGGTGGTGCCATCATTTCTGCCAGTGGAT...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTAACTAGACTGCCCCCTTaGTCCACTGGCAGAAATGAT +
Preference number: 4 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVTRLPP*STGRND
Trigger: ATCATTTCTGCCAGTGGATCAAGGGGGCAGTCTAGT...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCAGCCCCTGTGGCCCTTaGGGTCTTCGTGGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LKICVLICTVSGSTLYKSSPCGP*GLRGFS
Trigger: ACTGAAACCACGAAGACCGCAAGGGCCACAGGGGCT...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGGCTACCTTTTGCGCCTaGCTAGAAGACACAGATCTT +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVATFCA*LEDTDL
Trigger: AAGATCTGTGTCTTCTAGGCAGGCGCAAAAGGTAGC...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGCTTGAAGATGCTGAGTaGCTTCCAGAGGATTCGATC +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVLEDAE*LPEDSI
Trigger: GATCGAATCCTCTGGAAGGCACTCAGCATCTTCAAG...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTACAGGATCACAGTGGTTaGTGGCATAGTGGACCCTGT +
Preference number: 4 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLQDHSG*WHSGPC
Trigger: ACAGGGTCCACTATGCCACCAACCACTGTGATCCTG...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTACACAATAAGGCTCTGTaGCTGGCTAGGACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLHNKAL*LARTQD
Trigger: ATCCTGGGTCCTAGCCAGCCACAGAGCCTTATTGTG...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGTGGGAATCTGGTAACTaGATTGCAGAGTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVWESGN*IAEWKQ
Trigger: CTGCTTCCACTCTGCAATCCAGTTACCAGATTCCCA...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCATATTTGGCCTTTGCTTaGTCTATCCATGCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSYLAFA*SIHALA
Trigger: AGCGAGAGCATGGATAGATCAAGCAAAGGCCAAATA...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTGAAAGGCCAAAATCATaGGCGCAATTGCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: VVESLLGAVKYRIQNINVERPKS*AQLLRV
Trigger: GACCCGCAGCAATTGCGCTCATGATTTTGGCCTTTC...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATTCGATCCACCCCCATaGGGCTGTATTACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVFDPPP*GCITLS
Trigger: TGAAAGAGTAATACAGCCTCATGGGGGTGGATCGAA...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCCTTCCCTGCAGCCGCTaGCATGCAGACACTCACAAA +
Preference number: 4 (lower is better)
Translates to: LKICVLICTVSGSTLYKSLPCSR*HADTHK
Trigger: TTTGTGAGTGTCTGCATGGCAGCGGCTGCAGGGAAG...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCATCGGACATCTCATGTTaGCCTTTGACAATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSSDISC*PLTMEA
Trigger: TGCTTCCATTGTCAAAGGGCAACATGAGATGTCCGA...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTAGAACTGGGAAGCTACTaGCAGAGGAGTAGGTATTCT +
Preference number: 4 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVELGSY*QRSRYS
Trigger: AGAATACCTACTCCTCTGGCAGTAGCTTCCCAGTTC...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATTCTGCCATGCCAGGTaGTTTGTCAATGACGGAGAA +
Preference number: 4 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVFCHAR*FVNDGE
Trigger: TTCTCCGTCATTGACAAACCACCTGGCATGGCAGAA...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCACAAAGATTTTGGAACTaGGAAGCTACTGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSQRFWN*EATARG
Trigger: TCCTCTGGCAGTAGCTTCCCAGTTCCAAAATCTTTG...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTACCCAGTCAGTTTCCTaGGTTGCTTTACTGGACGGC +
Preference number: 4 (lower is better)
Translates to: VVESLLGAVKYRIQNINVTQSVS*VALLDG
Trigger: GCCGTCCAGTAAAGCAACCCAGGAAACTGACTGGGT...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCACTTAAGACCTGTAAGTaGAGTCCACTTCCAACGTTA +
Preference number: 4 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSLKTCK*SPLPTL
Trigger: TAACGTTGGAAGTGGACTTCACTTACAGGTCTTAAG...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCACTCCTAATCGACTTGTaGAAAGCTGCTTTATTAGCG +
Preference number: 4 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSLLIDL*KAALLA
Trigger: CGCTAATAAAGCAGCTTTTCACAAGTCGATTAGGAG...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTACATACTCTGCATCGTaGCAGATTGTCTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: VVESLLGAVKYRIQNINVTYSAS*QIVCTG
Trigger: GCCTGTGCAGACAATCTGTCACGATGCAGAGTATGT...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCACACAAGAGTATGTGCTaGACTCAACTCTTCAACAGA +
Preference number: 4 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSHKSMC*TQLFNR
Trigger: TCTGTTGAAGAGTTGAGTGCAGCACATACTCTTGTG...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGTCTGCATTGGCTTCTTaGAAAGATTTTGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVSALAS*KDFGTG
Trigger: CCCAGTTCCAAAATCTTTGCAAGAAGCCAATGCAGA...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCACAGTTTGTGGCTGACTaGTGTTTAGGAGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSQFVAD*CLGVRM
Trigger: CATTCTTACTCCTAAACAGCAGTCAGCCACAAACTG...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGGACAGTGTGGTCCTTTaGATATCAGTGACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVDSVVL*ISVTEK
Trigger: TTTCTCAGTCACTGATATGCAAAGGACCACACTGTC...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCGTCAGTTTCCTGGGTTaGTTTACTGGACGGCTGATG +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACVSFLG*FTGRLM
Trigger: CATCAGCCGTCCAGTAAAGCAACCCAGGAAACTGAC...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCGCGCCCTTTCCGCAATaGCACATCAGCAGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACAPFPQ*HISSKS
Trigger: ACTTTTACTGCTGATGTGCCATTGCGGAAAGGGCGC...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTATTTTGCCGCACTAAATaGGGATGTTTAGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLFCRTK*GCLGSS
Trigger: GCTGCTTCCTAAACATCCTCATTTAGTGCGGCAAAA...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCGGGTCAGTTTGTGGCTaGCTGCTGTTTAGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: LKICVLICTVSGSTLYKSGSVCG*LLFRSK
Trigger: CTTACTCCTAAACAGCAGTCAGCCACAAACTGACCC...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTGGATCAATGAGTTGTTaGAAGTCTGCTGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: VVESLLGAVKYRIQNINVGSMSC*KSAGCS
Trigger: ACTGCACCCAGCAGACTTTCAACAACTCATTGATCC...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCATATTTTCCATTTTTCTaGCATGCCAGGTGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSYFPFF*HARWFV
Trigger: GACAAACCACCTGGCATGGCAGAAAAATGGAAAATA...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGCTGAGTTACTTTCTCTaGATTGGCTTCTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVLSYFL*IGFLQR
Trigger: TCTTTGCAAGAAGCCAATGCAGAGAAAGTAACTCAG...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTACACATTCTGTCCTACTaGTATATTAGGCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLHILSY*YIRHGQ
Trigger: CTGGCCATGCCTAATATAGCAGTAGGACAGAATGTG...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGATCCTGTGTGAACACTaGTTCGTTGTCATTGATATC +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVILCEH*FVVIDI
Trigger: GATATCAATGACAACGAACCAGTGTTCACACAGGAT...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCTCATCGTGGCTTCCTTaGCCATACCTCCTACTCCAT +
Preference number: 4 (lower is better)
Translates to: LKICVLICTVSGSTLYKSSSWLP*PYLLLH
Trigger: ATGGAGTAGGAGGTATGGCCAAGGAAGCCACGATGA...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTTACCAAGGTAGAAGCTaGAGCATACACCCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: VVESLLGAVKYRIQNINVYQGRS*SIHPLC
Trigger: ACAGAGAGGGTGTATGCTCCAGCTTCTACCTTGGTA...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTAACTGGATTGCAGAGTaGAAGCAGGTGCTAGAACTC +
Preference number: 4 (lower is better)
Translates to: VVESLLGAVKYRIQNINVNWIAE*KQVLEL
Trigger: GAGTTCTAGCACCTGCTTCCACTCTGCAATCCAGTT...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCATTTCTAAAATACTCCTaGAAGCAGAGACAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSFLKYS*KQRQCG
Trigger: ACCACACTGTCTCTGCTTCCAGGAGTATTTTAGAAA...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCCCTGGGTTGCTTTACTaGACGGCTGATGAACTAGGT +
Preference number: 4 (lower is better)
Translates to: LKICVLICTVSGSTLYKSPGLLY*TADELG
Trigger: ACCTAGTTCATCAGCCGTCCAGTAAAGCAACCCAGG...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCTATGAGCACCATAGCTaGTGCTCAGACTGTGCATGT +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACYEHHS*CSDCAC
Trigger: ACATGCACAGTCTGAGCACCAGCTATGGTGCTCATA...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATACATTGTTTCCTCTTaGATCCAAAGCGTAACCTGT +
Preference number: 4 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVYIVSS*IQSVTC
Trigger: ACAGGTTACGCTTTGGATGCAAGAGGAAACAATGTA...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGAGAACCTATTTCATCTaGATCGAACACTTTTATGCG +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVRTYFI*IEHFYA
Trigger: CGCATAAAAGTGTTCGATGCAGATGAAATAGGTTCT...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGCGACTTGTGAAAAGCTaGTTTATTAGCGACAATAAC +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVRLVKS*FISDNN
Trigger: GTTATTGTCGCTAATAAAGCAGCTTTTCACAAGTCG...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTTCCATCCAGGTCCTCTaGAGTAACATTCACATACTC +
Preference number: 4 (lower is better)
Translates to: VVESLLGAVKYRIQNINVSIQVL*SNIHIL
Trigger: GAGTATGTGAATGTTACTGCAGAGGACCTGGATGGA...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTAGTGAGTGTAAGGACCTaGTTTTCAGGACAACTAAAA +
Preference number: 4 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVVSVRT*FSGQLK
Trigger: TTTTAGTTGTCCTGAAAAGCAGGTCCTTACACTCAC...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCTGCTGTACAGTGCTATaGTTGGTAACTCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACCCTVL*LVTLVE
Trigger: TTCCACCAGAGTTACCAAGCATAGCACTGTACAGCA...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCTTAGGTTTCCAAGGCTaGTCAAGGTGGAAGCTTAAG +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACLGFQG*SRWKLK
Trigger: CTTAAGCTTCCACCTTGAGCAGCCTTGGAAACCTAA...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGGATCAGAATGTATCTTaGCAATTGGATTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVDQNVS*QLDSSW
Trigger: CCAAGAAGAATCCAATTGCCAAGATACATTCTGATC...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTTTTACATATCTTGCATaGGCTGGTAGTCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: VVESLLGAVKYRIQNINVFTYLA*AGSPVS
Trigger: GGACACTGGACTACCAGCCCATGCAAGATATGTAAA...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCTACTTCCTTTCATCGTaGCTTCCTTGGCCATACCTC +
Preference number: 4 (lower is better)
Translates to: LKICVLICTVSGSTLYKSYFLSS*LPWPYL
Trigger: GAGGTATGGCCAAGGAAGCCACGATGAAAGGAAGTA...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTCAAGGCTGCTCAAGGTaGAAGCTTAAGACCAACTTT +
Preference number: 4 (lower is better)
Translates to: VVESLLGAVKYRIQNINVQGCSR*KLKTNF
Trigger: AAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCCAAAGACATCCTGTGTaGACACTGGTTCGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LKICVLICTVSGSTLYKSQRHPV*TLVRCH
Trigger: ATGACAACGAACCAGTGTTCACACAGGATGTCTTTG...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTAATTCCTTCGTTAGTTTaGGCATCTGTTTCTATGTGG +
Preference number: 4 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLIPSLV*ASVSMW
Trigger: CCACATAGAAACAGATGCTCAAACTAACGAAGGAAT...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCGGACAACTAAAACCCTaGTTGTCTGAAATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACGQLKP*LSEIRN
Trigger: GTTCCTGATTTCAGACAATCAGGGTTTTAGTTGTCC...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCCTCTTTCCCTCACCATaGCGTAAGGTACATCTTGAA +
Preference number: 4 (lower is better)
Translates to: LKICVLICTVSGSTLYKSLFPSP*RKVHLE
Trigger: TTCAAGATGTACCTTACGTCATGGTGAGGGAAAGAG...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTAATGGTAGAATTAGAATaGCCAGATTCCTCTAAACCA +
Preference number: 4 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVMVELE*PDSSKP
Trigger: TGGTTTAGAGGAATCTGGTCATTCTAATTCTACCAT...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTATCCATTGCCATCTCTTaGTTCTACTGTCAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLSIAIS*FYCQSV
Trigger: TACACTTTGACAGTAGAAGCAAGAGATGGCAATGGA...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTACAATTATTTGGCCTTTaGTTGATCTATCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVQLFGL*LIYPCS
Trigger: AGAGCATGGATAGATCAAGCAAAGGCCAAATAATTG...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGGAATTAACCATAGTTTaGTCACAGAGTGAATGTGAA +
Preference number: 4 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVELTIV*SQSECE
Trigger: TTCACATTCACTCTGTGAGCAAACTATGGTTAATTC...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCCTGGTGCTCAGACTGTaGATGTATCTTTGGATCAAT +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACLVLRL*MYLWIN
Trigger: ATTGATCCAAAGATACATGCACAGTCTGAGCACCAG...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCTCGAATTCAGGGTATTaGGCTCATCTGCATCTGTTG +
Preference number: 4 (lower is better)
Translates to: LKICVLICTVSGSTLYKSSNSGY*AHLHLL
Trigger: CAACAGATGCAGATGAGCCCAATACCCTGAATTCGA...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR CAA 72 bp TCACATTTTAAGTGCTCAATAGTCACATGGCCCATATaGGACAGCACATCCCTAAAAGAGAGTAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: SHFKCSIVTWPI*DSTSLKESNSK
Trigger: CTTGGAATTACTCTCTTTTAGGGATGTGCTGTCCAATATGGGCCATGTGACTATTGAGCACTTAAAATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585206.1
CDS-3UTR TCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCACTTCTACGTTGACTTaGTTTTCTTCAACCATCCCT +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACTSTLT*FSSTIP
Trigger: AGGGATGGTTGAAGAAAATCAAGTCAACGTAGAAGT...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTGGAGTAGGTATTCTCTaGATTAACCATAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: VVESLLGAVKYRIQNINVGVGIL*INHSLL
Trigger: GAGCAAACTATGGTTAATTCAGAGAATACCTACTCC...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTTCAGTGACTATTTCCTaGGTTACTTTCTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: VVESLLGAVKYRIQNINVSVTIS*VTFSAL
Trigger: CAATGCAGAGAAAGTAACTCAGGAAATAGTCACTGA...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTAGTAAACAATTCTAGATaGTGGAAGAGTAACCTCCAT +
Preference number: 4 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLVNNSR*WKSNLH
Trigger: ATGGAGGTTACTCTTCCATCATCTAGAATTGTTTAC...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCGGTATTGGGCTCATCTaGATCTGTTGCATTGATTTT +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACGIGLI*ICCIDF
Trigger: AAAATCAATGCAACAGATGCAGATGAGCCCAATACC...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCAACATTCACATACTCTaGATCGTGACAGATTGTCTG +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACNIHIL*IVTDCL
Trigger: CAGACAATCTGTCACGATGCAGAGTATGTGAATGTT...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCGGTACTTTCTTGGCGTaGTATTTTCCATTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACGTFLA*YFPFFC
Trigger: GCAGAAAAATGGAAAATAGCACGCCAAGAAAGTACC...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCTGTTCAGAATTTTCATaGCGGTTGAGACAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACCSEFS*RLRQGR
Trigger: TCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACA...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCGTATCTTTGGATCAATaGGTTGTTGAAAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LKICVLICTVSGSTLYKSVSLDQ*VVESLL
Trigger: CAGCAGACTTTCAACAACTCATTGATCCAAAGATAC...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCGAGTCCTCTTTCTTCTaGAAGATCAGAATGTATCTT +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACESSFF*KIRMYL
Trigger: AAGATACATTCTGATCTTGCAGAAGAAAGAGGACTC...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR GCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCTATACAGTATGTACGTaGACACACACACACTGTCAT +
Preference number: 4 (lower is better)
Translates to: LKICVLICTVSGSTLYKSYTVCT*THTHCH
Trigger: ATGACAGTGTGTGTGTGTGCACGTACATACTGTATA...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTATGTATCTTGGCAATTaGATTCTTCTTGGACAGATC +
Preference number: 4 (lower is better)
Translates to: VVESLLGAVKYRIQNINVMYLGN*ILLGQI
Trigger: GATCTGTCCAAGAAGAATCCAATTGCCAAGATACAT...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCAAATATACCAAAAGGTaGCTCTGTAATCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACKYTKR*LCNPFS
Trigger: GGAAAAGGGATTACAGAGCCACCTTTTGGTATATTT...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCACACTGGTACTTTCTTaGCGTGCTATTTTCCATTTT +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACTLVLS*RAIFHF
Trigger: AAAATGGAAAATAGCACGCCAAGAAAGTACCAGTGT...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
3UTR CAA 72 bp TATTACACATTCAACGTGCATACAGCACATTACAATTaGGGCCAGTCACATTTTAAGTGCTCAATAGTCACA +
Preference number: 4 (lower is better)
Translates to: YYTFNVHTAHYN*GQSHFKCSIVT
Trigger: TGTGACTATTGAGCACTTAAAATGTGACTGGCCCAAATTGTAATGTGCTGTATGCACGTTGAATGTGTAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585206.1
CDS-3UTR TCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCCTCGCTAACATAAATTaGGATGACGCTGCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: LKICVLICTVSGSTLYKSLANIN*DDAAFK
Trigger: TTTAAAAGCAGCGTCATCTCAATTTATGTTAGCGAG...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCTCTAGGATAATCTTCTaGTATGGCCACAATCTTTAC +
Preference number: 4 (lower is better)
Translates to: LKICVLICTVSGSTLYKSSRIIF*YGHNLY
Trigger: GTAAAGATTGTGGCCATATCAGAAGATTATCCTAGA...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR TCA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCAAAACCCTGATTGTCTaGAATCAGGAACTGAATTTC +
Preference number: 4 (lower is better)
Translates to: LKICVLICTVSGSTLYKSKTLIV*NQELNF
Trigger: GAAATTCAGTTCCTGATTTCAGACAATCAGGGTTTT...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CCA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCGATAATCTTCTGATATaGCCACAATCTTTACAGTGT +
Preference number: 4 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACDNLLI*PQSLQC
Trigger: ACACTGTAAAGATTGTGGCCATATCAGAAGATTATC...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 90 bp AGCTGCCTGAGCTCCGGCCATGTCTCTGGAAGCCCCTGTGGCCCTTaGGGTCTTCGTGGTTTCAGTGGTCATGATAGCGCCTGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: SCLSSGHVSGSPCGP*GLRGFSGHDSACGP
Trigger: GGGGCCACAGGCGCTATCATGACCACTGAAACCACGAAGACCGCAAGGGCCACAGGGGCTTCCAGAGACATGGCCGGAGCTCAGGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CCA 90 bp CTTCGTTCAGTGCAACAGCAGCTGCCTGAGCTCCGGCCATGTCTCTaGAAGCCCCTGTGGCCCTTGCGGTCTTCGTGGTTTCAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: LRSVQQQLPELRPCL*KPLWPLRSSWFQWS
Trigger: TGACCACTGAAACCACGAAGACCGCAAGGGCCACAGGGGCTTCCAGAGACATGGCCGGAGCTCAGGCAGCTGCTGTTGCACTGAACGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CCA 90 bp GAAGCTGGAGCATACACCCTCTCTGTCACAATAAGGCTCTGTGGCTaGCTAGGACCCAGGATCACAGTGGTTGGTGGCATAGTGGACCCT +
Preference number: 5 (lower is better)
Translates to: EAGAYTLSVTIRLCG*LGPRITVVGGIVDP
Trigger: AGGGTCCACTATGCCACCAACCACTGTGATCCTGGGTCCTAGCCAGCCACAGAGCCTTATTGTGACAGAGAGGGTGTATGCTCCAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS TCA 90 bp CTGTCCTACTGCTATATTAGGCATGGCCAGAGTAGGCTGCACACCTaGGCTGGGGGCAAGGAAGCTCTCTCTTTCCCTCACCATGACGTA +
Preference number: 5 (lower is better)
Translates to: LSYCYIRHGQSRLHT*AGGKEALSFPHHDV
Trigger: TACGTCATGGTGAGGGAAAGAGAGAGCTTCCTTGCCCCCAGCTCAGGTGTGCAGCCTACTCTGGCCATGCCTAATATAGCAGTAGGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 90 bp GTCACATTCTGTCCTACTGCTATATTAGGCATGGCCAGAGTAGGCTaGACACCTGAGCTGGGGGCAAGGAAGCTCTCTCTTTCCCTCACC +
Preference number: 5 (lower is better)
Translates to: VTFCPTAILGMARVG*TPELGARKLSLSLT
Trigger: GGTGAGGGAAAGAGAGAGCTTCCTTGCCCCCAGCTCAGGTGTGCAGCCTACTCTGGCCATGCCTAATATAGCAGTAGGACAGAATGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CCA 90 bp GGTAGAAGCTGGAGCATACACCCTCTCTGTCACAATAAGGCTCTGTaGCTGGCTAGGACCCAGGATCACAGTGGTTGGTGGCATAGTGGA +
Preference number: 5 (lower is better)
Translates to: GRSWSIHPLCHNKAL*LARTQDHSGWWHSG
Trigger: TCCACTATGCCACCAACCACTGTGATCCTGGGTCCTAGCCAGCCACAGAGCCTTATTGTGACAGAGAGGGTGTATGCTCCAGCTTCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS TCA 90 bp GCACACCTGAGCTGGGGGCAAGGAAGCTCTCTCTTTCCCTCACCATaGCGTAAGGTACATCTTGAAGATGCTGAGTGCCTTCCAGAGGAT +
Preference number: 5 (lower is better)
Translates to: AHLSWGQGSSLFPSP*RKVHLEDAECLPED
Trigger: ATCCTCTGGAAGGCACTCAGCATCTTCAAGATGTACCTTACGTCATGGTGAGGGAAAGAGAGAGCTTCCTTGCCCCCAGCTCAGGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 90 bp GGCACCACCTTGTCTTCAGGTGGTGCTCCTTCATTATTCCAAGGATaGAGCATCTCTATGGTGCCAGGTATGGGGGTAAAGCCTTTGGCG +
Preference number: 5 (lower is better)
Translates to: GTTLSSGGAPSLFQG*SISMVPGMGVKPLA
Trigger: CGCCAAAGGCTTTACCCCCATACCTGGCACCATAGAGATGCTGCATCCTTGGAATAATGAAGGAGCACCACCTGAAGACAAGGTGGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS TCA 90 bp GCAGTAAAAGTGGTACCAATAGCAGGAGCAGAAAGGCCAAAATCATaGGCGCAATTGCTGCGGGTCCCAGGCCCACATAGGAGTCATGCT +
Preference number: 5 (lower is better)
Translates to: AVKVVPIAGAERPKS*AQLLRVPGPHRSHA
Trigger: AGCATGACTCCTATGTGGGCCTGGGACCCGCAGCAATTGCGCTCATGATTTTGGCCTTTCTGCTCCTGCTATTGGTACCACTTTTACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CCA 90 bp ATGGTGCCAGGTATGGGGGTAAAGCCTTTGGCGCCCTTTCCGCAATaGCACATCAGCAGTAAAAGTGGTACCAATAGCAGGAGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: MVPGMGVKPLAPFPQ*HISSKSGTNSRSRK
Trigger: CTTTCTGCTCCTGCTATTGGTACCACTTTTACTGCTGATGTGCCATTGCGGAAAGGGCGCCAAAGGCTTTACCCCCATACCTGGCACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CCA 90 bp TTCGTGGTTTCAGTGGTCATGATAGCGCCTGTGGCCCCTGTAAACTaGGTAGCTCTACCAGAAAGCAGGCTTCTGTGTTCTTCCCACCTT +
Preference number: 5 (lower is better)
Translates to: FVVSVVMIAPVAPVN*VALPESRLLCSSHL
Trigger: AAGGTGGGAAGAACACAGAAGCCTGCTTTCTGGTAGAGCTACCCAGTTTACAGGGGCCACAGGCGCTATCATGACCACTGAAACCACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS TCA 90 bp TTGGCCATACCTCCTACTCCATTTCTTCCTACTAGACTGCCCCCTTaGTCCACTGGCAGAAATGATGGCACCACCTTGTCTTCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: LAIPPTPFLPTRLPP*STGRNDGTTLSSGG
Trigger: ACCACCTGAAGACAAGGTGGTGCCATCATTTCTGCCAGTGGATCAAGGGGGCAGTCTAGTAGGAAGAAATGGAGTAGGAGGTATGGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 90 bp TGGCTTCCTTGGCCATACCTCCTACTCCATTTCTTCCTACTAGACTaGCCCCTTGATCCACTGGCAGAAATGATGGCACCACCTTGTCTT +
Preference number: 5 (lower is better)
Translates to: WLPWPYLLLHFFLLD*PLDPLAEMMAPPCL
Trigger: AAGACAAGGTGGTGCCATCATTTCTGCCAGTGGATCAAGGGGGCAGTCTAGTAGGAAGAAATGGAGTAGGAGGTATGGCCAAGGAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CCA 90 bp CACAATAAGGCTCTGTGGCTGGCTAGGACCCAGGATCACAGTGGTTaGTGGCATAGTGGACCCTGTGACATAGGAAGTTTCTGTTGCTAT +
Preference number: 5 (lower is better)
Translates to: HNKALWLARTQDHSG*WHSGPCDIGSFCCY
Trigger: ATAGCAACAGAAACTTCCTATGTCACAGGGTCCACTATGCCACCAACCACTGTGATCCTGGGTCCTAGCCAGCCACAGAGCCTTATTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS TCA 90 bp TGTCCATCCAGGTCCTCTGCAGTAACATTCACATACTCTGCATCGTaGCAGATTGTCTGCACAGGCTCTATCAGTGTGGGACAGTTGTCG +
Preference number: 5 (lower is better)
Translates to: CPSRSSAVTFTYSAS*QIVCTGSISVGQLS
Trigger: CGACAACTGTCCCACACTGATAGAGCCTGTGCAGACAATCTGTCACGATGCAGAGTATGTGAATGTTACTGCAGAGGACCTGGATGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS TCA 90 bp GTTCTTCCCACCTTCCATCCATCTCGGACATCTCATGTTGCCCTTTaGCAATGGAAGCAGAGCTACTTCCTTTCATCGTGGCTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: VLPTFHPSRTSHVAL*QWKQSYFLSSWLPW
Trigger: CCAAGGAAGCCACGATGAAAGGAAGTAGCTCTGCTTCCATTGTCAAAGGGCAACATGAGATGTCCGAGATGGATGGAAGGTGGGAAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 90 bp GTTTGGGTGTCCATCCAGGTCCTCTGCAGTAACATTCACATACTCTaGATCGTGACAGATTGTCTGCACAGGCTCTATCAGTGTGGGACA +
Preference number: 5 (lower is better)
Translates to: VWVSIQVLCSNIHIL*IVTDCLHRLYQCGT
Trigger: TGTCCCACACTGATAGAGCCTGTGCAGACAATCTGTCACGATGCAGAGTATGTGAATGTTACTGCAGAGGACCTGGATGGACACCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 90 bp GGAGAAACTGAAAGGGCCACTGTTTGGGTGTCCATCCAGGTCCTCTaGAGTAACATTCACATACTCTGCATCGTGACAGATTGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: GETERATVWVSIQVL*SNIHILCIVTDCLH
Trigger: GTGCAGACAATCTGTCACGATGCAGAGTATGTGAATGTTACTGCAGAGGACCTGGATGGACACCCAAACAGTGGCCCTTTCAGTTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 90 bp CAGCAGCACACTGGTACTTTCTTGGCGTGCTATTTTCCATTTTTCTaGCATGCCAGGTGGTTTGTCAATGACGGAGAAACTGAAAGGGCC +
Preference number: 5 (lower is better)
Translates to: QQHTGTFLACYFPFF*HARWFVNDGETERA
Trigger: GGCCCTTTCAGTTTCTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAATGGAAAATAGCACGCCAAGAAAGTACCAGTGTGCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 90 bp AGTGGTTGGTGGCATAGTGGACCCTGTGACATAGGAAGTTTCTGTTaGTATCACATTTCTAGAAGCCATTGGGTCAGGAAGAGGTGTAGC +
Preference number: 5 (lower is better)
Translates to: SGWWHSGPCDIGSFC*YHISRSHWVRKRCS
Trigger: GCTACACCTCTTCCTGACCCAATGGCTTCTAGAAATGTGATAGCAACAGAAACTTCCTATGTCACAGGGTCCACTATGCCACCAACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CCA 90 bp AACTGTACCTTCATTAGCATAAGGCTGATCTACCAAGGTAGAAGCTaGAGCATACACCCTCTCTGTCACAATAAGGCTCTGTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: NCTFISIRLIYQGRS*SIHPLCHNKALWLA
Trigger: AGCCAGCCACAGAGCCTTATTGTGACAGAGAGGGTGTATGCTCCAGCTTCTACCTTGGTAGATCAGCCTTATGCTAATGAAGGTACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCAGCCATGCCAGGTGGTTaGTCAATGACGGAGAAACTG +
Preference number: 5 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSAMPGG*SMTEKL
Trigger: CAGTTTCTCCGTCATTGACAAACCACCTGGCATGGC...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGTTCATCGTGGCTTCCTaGGCCATACCTCCTACTCCA +
Preference number: 5 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVFIVAS*AIPPTP
Trigger: TGGAGTAGGAGGTATGGCCAAGGAAGCCACGATGAA...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS TCA 90 bp TCAGAGGTAGTAATTGAGGGGATACTCAGTAGAGGCAAGAGATTGTaGTGTGAGAATGTGATCGCCAGGTATGAGCTGCAAGAAAGCCTG +
Preference number: 5 (lower is better)
Translates to: SEVVIEGILSRGKRL*CENVIARYELQESL
Trigger: CAGGCTTTCTTGCAGCTCATACCTGGCGATCACATTCTCACATCACAATCTCTTGCCTCTACTGAGTATCCCCTCAATTACTACCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682087.1
CDS-3UTR CAA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCATGGGGGTAAAGCCTTaGGCGCCCTTTCCGCAATGG +
Preference number: 5 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACMGVKP*APFPQW
Trigger: CCATTGCGGAAAGGGCGCCAAAGGCTTTACCCCCAT...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTAAATGATGGCACCACCTaGTCTTCAGGTGGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVNDGTT*SSGGAP
Trigger: AGGAGCACCACCTGAAGACAAGGTGGTGCCATCATT...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCAAGCCCCTGTGGCCCTaGCGGTCTTCGTGGTTTCAG +
Preference number: 5 (lower is better)
Translates to: LKICVLICTVSGSTLYKSKPLWP*RSSWFQ
Trigger: CTGAAACCACGAAGACCGCAAGGGCCACAGGGGCTT...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCCGGGGTTTCACCAGGTaGGCCTGGCTGATCTCAAAC +
Preference number: 5 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACRGFTR*AWLISN
Trigger: GTTTGAGATCAGCCAGGCCAACCTGGTGAAACCCCG...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS TCA 90 bp GTTTCAGTGGTGAGTAAACTAACTTCCTCCTCACACACAGGTGGTTaGAGAAGGTGGATTCTGGTGAAAATTCCCCCTCATCTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: VSVVSKLTSSSHTGG*RRWILVKIPPHLSV
Trigger: AACTGAGAGATGAGGGGGAATTTTCACCAGAATCCACCTTCTTCAACCACCTGTGTGTGAGGAGGAAGTTAGTTTACTCACCACTGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683614.1
CDS GCA 90 bp AACGTGCATACAGCACATTACAATTTGGGCCAGTCACATTTTAAGTaGTCAATAGTCACATGGCCCATATTGGACAGCACATCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: NVHTAHYNLGQSHFK*SIVTWPILDSTSLS
Trigger: AGAGAGGGATGTGCTGTCCAATATGGGCCATGTGACTATTGAGCACTTAAAATGTGACTGGCCCAAATTGTAATGTGCTGTATGCACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682241.1
CDS CCA 90 bp CATTACAATTTGGGCCAGTCACATTTTAAGTGCTCAATAGTCACATaGCCCATATTGGACAGCACATCCCTCTCTGTCCAAGGTAACACT +
Preference number: 5 (lower is better)
Translates to: HYNLGQSHFKCSIVT*PILDSTSLSVQGNT
Trigger: AGTGTTACCTTGGACAGAGAGGGATGTGCTGTCCAATATGGGCCATGTGACTATTGAGCACTTAAAATGTGACTGGCCCAAATTGTAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682241.1
CDS-3UTR CAA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGCTACATTGTTTCCTCTaGCATCCAAAGCGTAACCTG +
Preference number: 5 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVLHCFL*HPKRNL
Trigger: CAGGTTACGCTTTGGATGCAAGAGGAAACAATGTAG...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGTTCGAATTCAGGGTATaGGGCTCATCTGCATCTGTT +
Preference number: 5 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVFEFRV*GSSASV
Trigger: AACAGATGCAGATGAGCCCAATACCCTGAATTCGAA...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTAAATCTGGTAACTGGATaGCAGAGTGGAAGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLNLVTG*QSGSRC
Trigger: GCACCTGCTTCCACTCTGCAATCCAGTTACCAGATT...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 90 bp AGCTTGTTTTACAGGTTTGTCTGTAACTTCTCCATTGCCATCTCTTaGTTCTACTGTCAAAGTGTAGCTGCTGTGTTCCTCTCTGTCCAA +
Preference number: 5 (lower is better)
Translates to: SLFYRFVCNFSIAIS*FYCQSVAAVFLSVQ
Trigger: TTGGACAGAGAGGAACACAGCAGCTACACTTTGACAGTAGAAGCAAGAGATGGCAATGGAGAAGTTACAGACAAACCTGTAAAACAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261590.13
ENST00000682087.1
ENST00000683614.1
CDS-3UTR CAA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCACCAATTATTTGGCCTTaGCTTGATCTATCCATGCTC +
Preference number: 5 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSPIIWP*LDLSML
Trigger: GAGCATGGATAGATCAAGCAAAGGCCAAATAATTGG...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCCTGCATCGTGACAGATaGTCTGCACAGGCTCTATCA +
Preference number: 5 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACLHRDR*SAQALS
Trigger: TGATAGAGCCTGTGCAGACAATCTGTCACGATGCAG...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp CAAGGCTGCTCAAGGTGGAAGCTTAAGACCAACTTTTGTTTGAGTACACAAGTGCACACTGGTACTTTCTaGGCGTGCTATTTTCCATTT +
Preference number: 5 (lower is better)
Translates to: QGCSRWKLKTNFCLSTQVHTGTF*ACYFPF
Trigger: AAATGGAAAATAGCACGCCAAGAAAGTACCAGTGTG...CACTTGTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTCTCGGACATCTCATGTaGCCCTTTGACAATGGAAGC +
Preference number: 5 (lower is better)
Translates to: VVESLLGAVKYRIQNINVLGHLM*PFDNGS
Trigger: GCTTCCATTGTCAAAGGGCAACATGAGATGTCCGAG...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCAGGTGTAGCTACCTTTaGCGCCTGCCTAGAAGACAC +
Preference number: 5 (lower is better)
Translates to: LKICVLICTVSGSTLYKSRCSYL*RLPRRH
Trigger: GTGTCTTCTAGGCAGGCGCAAAAGGTAGCTACACCT...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCAAGGTACTCTGTTCACTaGGTAAATTCTCAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSRYSVH*VNSQKP
Trigger: TGGCTTCTGAGAATTTACCAAGTGAACAGAGTACCT...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTATGGATCAATGAGTTGTaGAAAGTCTGCTGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLWINEL*KVCWVQ
Trigger: CTGCACCCAGCAGACTTTCAACAACTCATTGATCCA...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS TCA 90 bp CTAATATGCAGTATGATCATATTAAGAGGTGGGGCCTTTGGTAAGTaGTTAAGTCATGAGGGCACCACCCTCATGAATGGAATTAGTGCT +
Preference number: 5 (lower is better)
Translates to: LICSMIILRGGAFGK*LSHEGTTLMNGISA
Trigger: AGCACTAATTCCATTCATGAGGGTGGTGCCCTCATGACTTAATCACTTACCAAAGGCCCCACCTCTTAATATGATCATACTGCATATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683614.1
CDS-3UTR CAA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTAGTGAACACTGGTTCGTaGTCATTGATATCAAGAACC +
Preference number: 5 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVVNTGS*SLISRT
Trigger: GGTTCTTGATATCAATGACAACGAACCAGTGTTCAC...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp TCAAGTCTTAAAGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTAGTGGGACAGTTGTCGTaGATGTCTTCAACATTGATA +
Preference number: 5 (lower is better)
Translates to: SSLKEVMSTIAGAQTVHVVGQLS*MSSTLI
Trigger: TATCAATGTTGAAGACATCAACGACAACTGTCCCAC...TACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCTTTAAGACTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTAATCAGTGTGGGACAGTaGTCGTTGATGTCTTCAACA +
Preference number: 5 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLISVGQ*SLMSST
Trigger: TGTTGAAGACATCAACGACAACTGTCCCACACTGAT...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCGACGTAAGGTACATCTaGAAGATGCTGAGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACDVRYI*KMLSAF
Trigger: GAAGGCACTCAGCATCTTCAAGATGTACCTTACGTC...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCATTCTCAGAAGCCAGATaGACTCTCTATGTATCTTGT +
Preference number: 5 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSFSEAR*TLYVSC
Trigger: ACAAGATACATAGAGAGTCAATCTGGCTTCTGAGAA...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTACTTTGGATCAATGAGTaGTTGAAAGTCTGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLLWINE*LKVCWV
Trigger: CACCCAGCAGACTTTCAACAACTCATTGATCCAAAG...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 90 bp CATATTGTCTATGGTGCTTTCCTGCAGATAGCAGAGTTGAGTAGTTaGTACAGAGACCTTATCCATCACATTAATCTACCCTATCTGTTC +
Preference number: 5 (lower is better)
Translates to: HIVYGAFLQIAELSS*YRDLIHHINLPYLF
Trigger: GAACAGATAGGGTAGATTAATGTGATGGATAAGGTCTCTGTAGCAACTACTCAACTCTGCTATCTGCAGGAAAGCACCATAGACAATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684461.1
CDS-3UTR CAA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCAAATGTATCTTGGCAATaGGATTCTTCTTGGACAGAT +
Preference number: 5 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSNVSWQ*DSSWTD
Trigger: ATCTGTCCAAGAAGAATCCAATTGCCAAGATACATT...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp AGAAGTTATGAGCACCATAGCTGGTGCTCAGACTGTGCATGTATCTTTGGATCAAGATCAGAATGTATCTaGGCAATTGGATTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: RSYEHHSWCSDCACIFGSRSECI*AIGFFL
Trigger: CAAGAAGAATCCAATTGCCAAGATACATTCTGATCT...TGATCCAAAGATACATGCACAGTCTGAGCACCAGCTATGGTGCTCATAACTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTTTATTTGGCCTTTGCTaGATCTATCCATGCTCTCGC +
Preference number: 5 (lower is better)
Translates to: VVESLLGAVKYRIQNINVLFGLC*IYPCSR
Trigger: GCGAGAGCATGGATAGATCAAGCAAAGGCCAAATAA...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTACTAATTTTACATATCTaGCATGGGCTGGTAGTCCAG +
Preference number: 5 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLLILHI*HGLVVQ
Trigger: CTGGACTACCAGCCCATGCAAGATATGTAAAATTAG...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTCTCTGCATTGGCTTCTaGCAAAGATTTTGGAACTGG +
Preference number: 5 (lower is better)
Translates to: VVESLLGAVKYRIQNINVLCIGF*QRFWNW
Trigger: CCAGTTCCAAAATCTTTGCAAGAAGCCAATGCAGAG...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTAAAGGGTTTCTCTACATaGTTTCCTCTTGCATCCAAA +
Preference number: 5 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLKGFST*FPLASK
Trigger: TTTGGATGCAAGAGGAAACAATGTAGAGAAACCCTT...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCGGAATGGGTGTAGGCTaGTATTTACTCCTAATCGAC +
Preference number: 5 (lower is better)
Translates to: LKICVLICTVSGSTLYKSGMGVG*YLLLID
Trigger: GTCGATTAGGAGTAAATACAAGCCTACACCCATTCC...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCTTTTTCACTTTGACCTaGATGGGAATGGGTGTAGGC +
Preference number: 5 (lower is better)
Translates to: LKICVLICTVSGSTLYKSFFTLT*MGMGVG
Trigger: GCCTACACCCATTCCCATCAAGGTCAAAGTGAAAAA...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTATTCACATTTTTCACTTaGACCTTGATGGGAATGGGT +
Preference number: 5 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLFTFFT*TLMGMG
Trigger: ACCCATTCCCATCAAGGTCAAAGTGAAAAATGTGAA...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCTTGATGTCTTCAACATaGATAAGGACTGTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACLMSST*IRTVPV
Trigger: CACTGGCACAGTCCTTATCAATGTTGAAGACATCAA...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCAAGCTTTTTCTCACTTaGTTGCAGCAGCACACTGGT +
Preference number: 5 (lower is better)
Translates to: LKICVLICTVSGSTLYKSKLFLT*LQQHTG
Trigger: ACCAGTGTGCTGCTGCAACAAAGTGAGAAAAAGCTT...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCATCTCATGTTGCCCTTaGACAATGGAAGCAGAGCTA +
Preference number: 5 (lower is better)
Translates to: LKICVLICTVSGSTLYKSISCCP*TMEAEL
Trigger: TAGCTCTGCTTCCATTGTCAAAGGGCAACATGAGAT...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCTTCTGTGGCAGGTTTTaGTCTCTGCTCAATTTCCTT +
Preference number: 5 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACFCGRF*SLLNFL
Trigger: AAGGAAATTGAGCAGAGACAAAAACCTGCCACAGAA...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCTGTACAGTGCTATGCTaGGTAACTCTGGTGGAAGAT +
Preference number: 5 (lower is better)
Translates to: LKICVLICTVSGSTLYKSCTVLC*VTLVED
Trigger: ATCTTCCACCAGAGTTACCAAGCATAGCACTGTACA...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTATCTACGAATATTTATTaGGCACCCATGTTAGGCACT +
Preference number: 5 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLSTNIY*APMLGT
Trigger: AGTGCCTAACATGGGTGCCAAATAAATATTCGTAGA...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS TCA 90 bp TTGATGGGAATGGGTGTAGGCTTGTATTTACTCCTAATCGACTTGTaGAAAGCTGCTTTATTAGCGACAATAACACTGAAGTCAAGATTC +
Preference number: 5 (lower is better)
Translates to: LMGMGVGLYLLLIDL*KAALLATITLKSRF
Trigger: GAATCTTGACTTCAGTGTTATTGTCGCTAATAAAGCAGCTTTTCACAAGTCGATTAGGAGTAAATACAAGCCTACACCCATTCCCATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261590.13
ENST00000683614.1
CDS-3UTR CAA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTGCTTGTTTTACAGGTTaGTCTGTAACTTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: VVESLLGAVKYRIQNINVACFTG*SVTSPL
Trigger: CAATGGAGAAGTTACAGACAAACCTGTAAAACAAGC...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTAAATCTGAACTTGAGCTaGTTTTACAGGTTTGTCTGT +
Preference number: 5 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLNLNLS*FYRFVC
Trigger: ACAGACAAACCTGTAAAACAAGCTCAAGTTCAGATT...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp TTGGAGTGTTCAGAATTTTCATGGCGGTTGAGACAAGGAAGAGGTATAATGCTAGTTACTTTCTCTGCATaGGCTTCTTGCAAAGATTTT +
Preference number: 5 (lower is better)
Translates to: LECSEFSWRLRQGRGIMLVTFSA*ASCKDF
Trigger: AAAATCTTTGCAAGAAGCCAATGCAGAGAAAGTAAC...TAGCATTATACCTCTTCCTTGTCTCAACCGCCATGAAAATTCTGAACACTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp GTTGTTGAAAGTCTGCTGGGTGCAGTAAAGTACAGAATACAGAACATCAATGTTACTGGTTCGTTGTCATaGATATCAAGAACCTTAATG +
Preference number: 5 (lower is better)
Translates to: VVESLLGAVKYRIQNINVTGSLS*ISRTLM
Trigger: CATTAAGGTTCTTGATATCAATGACAACGAACCAGT...AACATTGATGTTCTGTATTCTGTACTTTACTGCACCCAGCAGACTTTCAACAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCAACTTCTACGTTGACTaGATTTTCTTCAACCATCCC +
Preference number: 5 (lower is better)
Translates to: LKICVLICTVSGSTLYKSNFYVD*IFFNHP
Trigger: GGGATGGTTGAAGAAAATCAAGTCAACGTAGAAGTT...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS-3UTR CAA 90 bp GCCAGATTGACTCTCTATGTATCTTGTTTTATCAGGATTGTTTGCATAGCTTGCACTTCAGCTAGTGTCTaGAATTTAAGTCCCAAATCA +
Preference number: 5 (lower is better)
Translates to: ARLTLYVSCFIRIVCIACTSASV*NLSPKS
Trigger: TGATTTGGGACTTAAATTCAAGACACTAGCTGAAGT...GCAAGCTATGCAAACAATCCTGATAAAACAAGATACATAGAGAGTCAATCTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 90 bp TGCAAATGTAAAATTTGCCAGCCAATTATCAGAACCTATTTCATCTaGATCGAACACTTTTATGCGCGTAACTTCTACGTTGACTTGATT +
Preference number: 5 (lower is better)
Translates to: CKCKICQPIIRTYFI*IEHFYARNFYVDLI
Trigger: AATCAAGTCAACGTAGAAGTTACGCGCATAAAAGTGTTCGATGCAGATGAAATAGGTTCTGATAATTGGCTGGCAAATTTTACATTTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261590.13
ENST00000682087.1
ENST00000683614.1
CDS GCA 90 bp AATGGGTGTAGGCTTGTATTTACTCCTAATCGACTTGTGAAAAGCTaGTTTATTAGCGACAATAACACTGAAGTCAAGATTCTTCATTTC +
Preference number: 5 (lower is better)
Translates to: NGCRLVFTPNRLVKS*FISDNNTEVKILHF
Trigger: GAAATGAAGAATCTTGACTTCAGTGTTATTGTCGCTAATAAAGCAGCTTTTCACAAGTCGATTAGGAGTAAATACAAGCCTACACCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261590.13
ENST00000683614.1
CDS-3UTR CAA 90 bp CTAAAAATATGTGTCCTGATCTGTACAGTTAGTGGGAGCACACTATATAAATCCAATTCCTTCGTTAGTTaGAGCATCTGTTTCTATGTG +
Preference number: 5 (lower is better)
Translates to: LKICVLICTVSGSTLYKSNSFVS*SICFYV
Trigger: CACATAGAAACAGATGCTCAAACTAACGAAGGAATT...GGATTTATATAGTGTGCTCCCACTAACTGTACAGATCAGGACACATATTTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS TCA 90 bp AGTTTGAGCATCTGTTTCTATGTGGAAATAACCTCCTTCATTTCCTaGTGCAAATGTAAAATTTGCCAGCCAATTATCAGAACCTATTTC +
Preference number: 5 (lower is better)
Translates to: SLSICFYVEITSFIS*CKCKICQPIIRTYF
Trigger: GAAATAGGTTCTGATAATTGGCTGGCAAATTTTACATTTGCATCAGGAAATGAAGGAGGTTATTTCCACATAGAAACAGATGCTCAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261590.13
ENST00000682087.1
ENST00000683614.1
CDS CCA 72 bp GTGCAACAGCAGCTGCCTGAGCTCCGGCCATGTCTCTaGAAGCCCCTGTGGCCCTTGCGGTCTTCGTGGTTT +
Preference number: 6 (lower is better)
Translates to: VQQQLPELRPCL*KPLWPLRSSWF
Trigger: AAACCACGAAGACCGCAAGGGCCACAGGGGCTTCCAGAGACATGGCCGGAGCTCAGGCAGCTGCTGTTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS TCA 72 bp ACAGATCCTCTCCCTCCCGAAGAGCCACGGGGGCGGTaGTCCAGGCGCGCTTTTGCCGCACTAAATGAGGAT +
Preference number: 6 (lower is better)
Translates to: TDPLPPEEPRGR*SRRAFAALNED
Trigger: ATCCTCATTTAGTGCGGCAAAAGCGCGCCTGGATCACCGCCCCCGTGGCTCTTCGGGAGGGAGAGGATCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261590.13
ENST00000585206.1
ENST00000683654.1
CDS GCA 72 bp AGCTCCGGCCATGTCTCTGGAAGCCCCTGTGGCCCTTaGGGTCTTCGTGGTTTCAGTGGTCATGATAGCGCC +
Preference number: 6 (lower is better)
Translates to: SSGHVSGSPCGP*GLRGFSGHDSA
Trigger: GGCGCTATCATGACCACTGAAACCACGAAGACCGCAAGGGCCACAGGGGCTTCCAGAGACATGGCCGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS TCA 72 bp CTTAAGAATTCTTCGTTCAGTGCAACAGCAGCTGCCTaGGCTCCGGCCATGTCTCTGGAAGCCCCTGTGGCC +
Preference number: 6 (lower is better)
Translates to: LKNSSFSATAAA*APAMSLEAPVA
Trigger: GGCCACAGGGGCTTCCAGAGACATGGCCGGAGCTCAGGCAGCTGCTGTTGCACTGAACGAAGAATTCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 72 bp CAGGAGCAGAAAGGCCAAAATCATGAGCGCAATTGCTaGGGGTCCCAGGCCCACATAGGAGTCATGCTGTGC +
Preference number: 6 (lower is better)
Translates to: QEQKGQNHERNC*GSQAHIGVMLC
Trigger: GCACAGCATGACTCCTATGTGGGCCTGGGACCCGCAGCAATTGCGCTCATGATTTTGGCCTTTCTGCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 72 bp GGCTGGTCTCGAACTCCTGAGCTCAAGCTATCTGCCTaGCTTGGCTTCTCAAAGTGTGGGGCTGGCTTTACT +
Preference number: 6 (lower is better)
Translates to: GWSRTPELKLSA*LGFSKCGAGFT
Trigger: AGTAAAGCCAGCCCCACACTTTGAGAAGCCAAGGCAGGCAGATAGCTTGAGCTCAGGAGTTCGAGACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682087.1
CDS CCA 72 bp GCTCTGTGGCTGGCTAGGACCCAGGATCACAGTGGTTaGTGGCATAGTGGACCCTGTGACATAGGAAGTTTC +
Preference number: 6 (lower is better)
Translates to: ALWLARTQDHSG*WHSGPCDIGSF
Trigger: GAAACTTCCTATGTCACAGGGTCCACTATGCCACCAACCACTGTGATCCTGGGTCCTAGCCAGCCACAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CCA 72 bp TGGAGCATACACCCTCTCTGTCACAATAAGGCTCTGTaGCTGGCTAGGACCCAGGATCACAGTGGTTGGTGG +
Preference number: 6 (lower is better)
Translates to: WSIHPLCHNKAL*LARTQDHSGWW
Trigger: CCACCAACCACTGTGATCCTGGGTCCTAGCCAGCCACAGAGCCTTATTGTGACAGAGAGGGTGTATGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS TCA 72 bp GAGACTCCAGTGAGTTCCCTTGTTCCTTTGGCCACGTaGGGATGCAGCAAGATGGTGCCATCTTGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: ETPVSSLVPLAT*GCSKMVPSWKQ
Trigger: CTGCTTCCAAGATGGCACCATCTTGCTGCATCCTCACGTGGCCAAAGGAACAAGGGAACTCACTGGAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683614.1
CDS CCA 72 bp CTGTGGCTGGCTAGGACCCAGGATCACAGTGGTTGGTaGCATAGTGGACCCTGTGACATAGGAAGTTTCTGT +
Preference number: 6 (lower is better)
Translates to: LWLARTQDHSGW*HSGPCDIGSFC
Trigger: ACAGAAACTTCCTATGTCACAGGGTCCACTATGCCACCAACCACTGTGATCCTGGGTCCTAGCCAGCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CCA 72 bp GCATACACCCTCTCTGTCACAATAAGGCTCTGTGGCTaGCTAGGACCCAGGATCACAGTGGTTGGTGGCATA +
Preference number: 6 (lower is better)
Translates to: AYTLSVTIRLCG*LGPRITVVGGI
Trigger: TATGCCACCAACCACTGTGATCCTGGGTCCTAGCCAGCCACAGAGCCTTATTGTGACAGAGAGGGTGTATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CAA 90 bp CAAGGATGCAGCATCTCTATGGTGCCAGGTATGGGGGTAAAGCCTTaGGCGCCCTTTCCGCAATGGCACATCAGCAGTAAAAGTGGTACC +
Preference number: 6 (lower is better)
Translates to: QGCSISMVPGMGVKP*APFPQWHISSKSGT
Trigger: GGTACCACTTTTACTGCTGATGTGCCATTGCGGAAAGGGCGCCAAAGGCTTTACCCCCATACCTGGCACCATAGAGATGCTGCATCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CCA 72 bp GGTATGGGGGTAAAGCCTTTGGCGCCCTTTCCGCAATaGCACATCAGCAGTAAAAGTGGTACCAATAGCAGG +
Preference number: 6 (lower is better)
Translates to: GMGVKPLAPFPQ*HISSKSGTNSR
Trigger: CCTGCTATTGGTACCACTTTTACTGCTGATGTGCCATTGCGGAAAGGGCGCCAAAGGCTTTACCCCCATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CCA 72 bp TCAGTGGTCATGATAGCGCCTGTGGCCCCTGTAAACTaGGTAGCTCTACCAGAAAGCAGGCTTCTGTGTTCT +
Preference number: 6 (lower is better)
Translates to: SVVMIAPVAPVN*VALPESRLLCS
Trigger: AGAACACAGAAGCCTGCTTTCTGGTAGAGCTACCCAGTTTACAGGGGCCACAGGCGCTATCATGACCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CAA 72 bp AGCATCTCTATGGTGCCAGGTATGGGGGTAAAGCCTTaGGCGCCCTTTCCGCAATGGCACATCAGCAGTAAA +
Preference number: 6 (lower is better)
Translates to: SISMVPGMGVKP*APFPQWHISSK
Trigger: TTTACTGCTGATGTGCCATTGCGGAAAGGGCGCCAAAGGCTTTACCCCCATACCTGGCACCATAGAGATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CAA 90 bp GGCAAGGAAGCTCTCTCTTTCCCTCACCATGACGTAAGGTACATCTaGAAGATGCTGAGTGCCTTCCAGAGGATTCGATCCACCCCCATG +
Preference number: 6 (lower is better)
Translates to: GKEALSFPHHDVRYI*KMLSAFQRIRSTPM
Trigger: CATGGGGGTGGATCGAATCCTCTGGAAGGCACTCAGCATCTTCAAGATGTACCTTACGTCATGGTGAGGGAAAGAGAGAGCTTCCTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 72 bp CAGCAAGACTCACCAGATACCAAATCTGTTGGCTGGTaGCTTGATGGACTTCCCAGCCTTCAGAACTGTGAG +
Preference number: 6 (lower is better)
Translates to: QQDSPDTKSVGW*LDGLPSLQNCE
Trigger: CTCACAGTTCTGAAGGCTGGGAAGTCCATCAAGGCACCAGCCAACAGATTTGGTATCTGGTGAGTCTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683614.1
CDS CAA 90 bp CCTTTGACAATGGAAGCAGAGCTACTTCCTTTCATCGTGGCTTCCTaGGCCATACCTCCTACTCCATTTCTTCCTACTAGACTGCCCCCT +
Preference number: 6 (lower is better)
Translates to: PLTMEAELLPFIVAS*AIPPTPFLPTRLPP
Trigger: AGGGGGCAGTCTAGTAGGAAGAAATGGAGTAGGAGGTATGGCCAAGGAAGCCACGATGAAAGGAAGTAGCTCTGCTTCCATTGTCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 72 bp GAAAGGGCCACTGTTTGGGTGTCCATCCAGGTCCTCTaGAGTAACATTCACATACTCTGCATCGTGACAGAT +
Preference number: 6 (lower is better)
Translates to: ERATVWVSIQVL*SNIHILCIVTD
Trigger: ATCTGTCACGATGCAGAGTATGTGAATGTTACTGCAGAGGACCTGGATGGACACCCAAACAGTGGCCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CCA 72 bp AGACAGCAAGACTCACCAGATACCAAATCTGTTGGCTaGTGCCTTGATGGACTTCCCAGCCTTCAGAACTGT +
Preference number: 6 (lower is better)
Translates to: RQQDSPDTKSVG*CLDGLPSLQNC
Trigger: ACAGTTCTGAAGGCTGGGAAGTCCATCAAGGCACCAGCCAACAGATTTGGTATCTGGTGAGTCTTGCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683614.1
CDS CAA 72 bp GCTCTCTCTTTCCCTCACCATGACGTAAGGTACATCTaGAAGATGCTGAGTGCCTTCCAGAGGATTCGATCC +
Preference number: 6 (lower is better)
Translates to: ALSFPHHDVRYI*KMLSAFQRIRS
Trigger: GGATCGAATCCTCTGGAAGGCACTCAGCATCTTCAAGATGTACCTTACGTCATGGTGAGGGAAAGAGAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CAA 72 bp TTTGGCCACGTGAGGATGCAGCAAGATGGTGCCATCTaGGAAGCAGACAGCAAGACTCACCAGATACCAAAT +
Preference number: 6 (lower is better)
Translates to: FGHVRMQQDGAI*EADSKTHQIPN
Trigger: ATTTGGTATCTGGTGAGTCTTGCTGTCTGCTTCCAAGATGGCACCATCTTGCTGCATCCTCACGTGGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683614.1
CDS CAA 90 bp TGTTCTTCCCACCTTCCATCCATCTCGGACATCTCATGTTGCCCTTaGACAATGGAAGCAGAGCTACTTCCTTTCATCGTGGCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: CSSHLPSISDISCCP*TMEAELLPFIVASL
Trigger: CAAGGAAGCCACGATGAAAGGAAGTAGCTCTGCTTCCATTGTCAAAGGGCAACATGAGATGTCCGAGATGGATGGAAGGTGGGAAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CAA 90 bp GCAGACAGCAAGACTCACCAGATACCAAATCTGTTGGCTGGTGCCTaGATGGACTTCCCAGCCTTCAGAACTGTGAGTAACAAATCTGCT +
Preference number: 6 (lower is better)
Translates to: ADSKTHQIPNLLAGA*MDFPAFRTVSNKSA
Trigger: AGCAGATTTGTTACTCACAGTTCTGAAGGCTGGGAAGTCCATCAAGGCACCAGCCAACAGATTTGGTATCTGGTGAGTCTTGCTGTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683614.1
CDS TCA 72 bp AGGTCCTCTGCAGTAACATTCACATACTCTGCATCGTaGCAGATTGTCTGCACAGGCTCTATCAGTGTGGGA +
Preference number: 6 (lower is better)
Translates to: RSSAVTFTYSAS*QIVCTGSISVG
Trigger: TCCCACACTGATAGAGCCTGTGCAGACAATCTGTCACGATGCAGAGTATGTGAATGTTACTGCAGAGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS TCA 72 bp ACCTTCCATCCATCTCGGACATCTCATGTTGCCCTTTaGCAATGGAAGCAGAGCTACTTCCTTTCATCGTGG +
Preference number: 6 (lower is better)
Translates to: TFHPSRTSHVAL*QWKQSYFLSSW
Trigger: CCACGATGAAAGGAAGTAGCTCTGCTTCCATTGTCAAAGGGCAACATGAGATGTCCGAGATGGATGGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 72 bp TCCATCCAGGTCCTCTGCAGTAACATTCACATACTCTaGATCGTGACAGATTGTCTGCACAGGCTCTATCAG +
Preference number: 6 (lower is better)
Translates to: SIQVLCSNIHIL*IVTDCLHRLYQ
Trigger: CTGATAGAGCCTGTGCAGACAATCTGTCACGATGCAGAGTATGTGAATGTTACTGCAGAGGACCTGGATGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS GCA 72 bp TCTTCCCACCTTCCATCCATCTCGGACATCTCATGTTaGCCTTTGACAATGGAAGCAGAGCTACTTCCTTTC +
Preference number: 6 (lower is better)
Translates to: SSHLPSISDISC*PLTMEAELLPF
Trigger: GAAAGGAAGTAGCTCTGCTTCCATTGTCAAAGGGCAACATGAGATGTCCGAGATGGATGGAAGGTGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CCA 72 bp TGGAAGCAGAGCTACTTCCTTTCATCGTGGCTTCCTTaGCCATACCTCCTACTCCATTTCTTCCTACTAGAC +
Preference number: 6 (lower is better)
Translates to: WKQSYFLSSWLP*PYLLLHFFLLD
Trigger: GTCTAGTAGGAAGAAATGGAGTAGGAGGTATGGCCAAGGAAGCCACGATGAAAGGAAGTAGCTCTGCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CAA 72 bp CACCTTCCATCCATCTCGGACATCTCATGTTGCCCTTaGACAATGGAAGCAGAGCTACTTCCTTTCATCGTG +
Preference number: 6 (lower is better)
Translates to: HLPSISDISCCP*TMEAELLPFIV
Trigger: CACGATGAAAGGAAGTAGCTCTGCTTCCATTGTCAAAGGGCAACATGAGATGTCCGAGATGGATGGAAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CAA 72 bp AAGACTCACCAGATACCAAATCTGTTGGCTGGTGCCTaGATGGACTTCCCAGCCTTCAGAACTGTGAGTAAC +
Preference number: 6 (lower is better)
Translates to: KTHQIPNLLAGA*MDFPAFRTVSN
Trigger: GTTACTCACAGTTCTGAAGGCTGGGAAGTCCATCAAGGCACCAGCCAACAGATTTGGTATCTGGTGAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683614.1
CDS CAA 72 bp ATGGAAGCAGAGCTACTTCCTTTCATCGTGGCTTCCTaGGCCATACCTCCTACTCCATTTCTTCCTACTAGA +
Preference number: 6 (lower is better)
Translates to: MEAELLPFIVAS*AIPPTPFLPTR
Trigger: TCTAGTAGGAAGAAATGGAGTAGGAGGTATGGCCAAGGAAGCCACGATGAAAGGAAGTAGCTCTGCTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CAA 72 bp TTCTTCCCACCTTCCATCCATCTCGGACATCTCATGTaGCCCTTTGACAATGGAAGCAGAGCTACTTCCTTT +
Preference number: 6 (lower is better)
Translates to: FFPPSIHLGHLM*PFDNGSRATSF
Trigger: AAAGGAAGTAGCTCTGCTTCCATTGTCAAAGGGCAACATGAGATGTCCGAGATGGATGGAAGGTGGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CAA 90 bp TTGGGCCAGTCACATTTTAAGTGCTCAATAGTCACATGGCCCATATaGGACAGCACATCCCTCTCTGTCCAAGGTAACACTGGTTGTATA +
Preference number: 6 (lower is better)
Translates to: LGQSHFKCSIVTWPI*DSTSLSVQGNTGCI
Trigger: TATACAACCAGTGTTACCTTGGACAGAGAGGGATGTGCTGTCCAATATGGGCCATGTGACTATTGAGCACTTAAAATGTGACTGGCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682241.1
CDS TCA 72 bp TACTCAGTAGAGGCAAGAGATTGTGATGTGAGAATGTaGTCGCCAGGTATGAGCTGCAAGAAAGCCTGGAAA +
Preference number: 6 (lower is better)
Translates to: YSVEARDCDVRM*SPGMSCKKAWK
Trigger: TTTCCAGGCTTTCTTGCAGCTCATACCTGGCGATCACATTCTCACATCACAATCTCTTGCCTCTACTGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682087.1
CDS TCA 72 bp GTAATTGAGGGGATACTCAGTAGAGGCAAGAGATTGTaGTGTGAGAATGTGATCGCCAGGTATGAGCTGCAA +
Preference number: 6 (lower is better)
Translates to: VIEGILSRGKRL*CENVIARYELQ
Trigger: TTGCAGCTCATACCTGGCGATCACATTCTCACATCACAATCTCTTGCCTCTACTGAGTATCCCCTCAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682087.1
CDS TCA 72 bp GTGAGTAAACTAACTTCCTCCTCACACACAGGTGGTTaGAGAAGGTGGATTCTGGTGAAAATTCCCCCTCAT +
Preference number: 6 (lower is better)
Translates to: VSKLTSSSHTGG*RRWILVKIPPH
Trigger: ATGAGGGGGAATTTTCACCAGAATCCACCTTCTTCAACCACCTGTGTGTGAGGAGGAAGTTAGTTTACTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683614.1
CDS CCA 72 bp TTCATTAGCATAAGGCTGATCTACCAAGGTAGAAGCTaGAGCATACACCCTCTCTGTCACAATAAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: FISIRLIYQGRS*SIHPLCHNKAL
Trigger: CAGAGCCTTATTGTGACAGAGAGGGTGTATGCTCCAGCTTCTACCTTGGTAGATCAGCCTTATGCTAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS TCA 72 bp AGTATGATCATATTAAGAGGTGGGGCCTTTGGTAAGTaGTTAAGTCATGAGGGCACCACCCTCATGAATGGA +
Preference number: 6 (lower is better)
Translates to: SMIILRGGAFGK*LSHEGTTLMNG
Trigger: TCCATTCATGAGGGTGGTGCCCTCATGACTTAATCACTTACCAAAGGCCCCACCTCTTAATATGATCATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683614.1
CDS GCA 72 bp TACAGGTTTGTCTGTAACTTCTCCATTGCCATCTCTTaGTTCTACTGTCAAAGTGTAGCTGCTGTGTTCCTC +
Preference number: 6 (lower is better)
Translates to: YRFVCNFSIAIS*FYCQSVAAVFL
Trigger: GAGGAACACAGCAGCTACACTTTGACAGTAGAAGCAAGAGATGGCAATGGAGAAGTTACAGACAAACCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261590.13
ENST00000682087.1
ENST00000683614.1
CDS GCA 72 bp ACTGGTACTTTCTTGGCGTGCTATTTTCCATTTTTCTaGCATGCCAGGTGGTTTGTCAATGACGGAGAAACT +
Preference number: 6 (lower is better)
Translates to: TGTFLACYFPFF*HARWFVNDGET
Trigger: AGTTTCTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAATGGAAAATAGCACGCCAAGAAAGTACCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CCA 72 bp AATTTTCAGTGGGAATCTGGTAACTGGATTGCAGAGTaGAAGCAGGTGCTAGAACTCTTTCTGTCACTGTCA +
Preference number: 6 (lower is better)
Translates to: NFQWESGNWIAE*KQVLELFLSLS
Trigger: TGACAGTGACAGAAAGAGTTCTAGCACCTGCTTCCACTCTGCAATCCAGTTACCAGATTCCCACTGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CAA 72 bp CTGAATTTCACTTCTCCCAAGCTTTTTCTCACTTTGTaGCAGCAGCACACTGGTACTTTCTTGGCGTGCTAT +
Preference number: 6 (lower is better)
Translates to: LNFTSPKLFLTL*QQHTGTFLACY
Trigger: ATAGCACGCCAAGAAAGTACCAGTGTGCTGCTGCAACAAAGTGAGAAAAAGCTTGGGAGAAGTGAAATTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CAA 72 bp TCACATTTTAAGTGCTCAATAGTCACATGGCCCATATaGGACAGCACATCCCTCTCTGTCCAAGGTAACACT +
Preference number: 6 (lower is better)
Translates to: SHFKCSIVTWPI*DSTSLSVQGNT
Trigger: AGTGTTACCTTGGACAGAGAGGGATGTGCTGTCCAATATGGGCCATGTGACTATTGAGCACTTAAAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682241.1
CDS GCA 72 bp TATGGTGCTTTCCTGCAGATAGCAGAGTTGAGTAGTTaGTACAGAGACCTTATCCATCACATTAATCTACCC +
Preference number: 6 (lower is better)
Translates to: YGAFLQIAELSS*YRDLIHHINLP
Trigger: GGGTAGATTAATGTGATGGATAAGGTCTCTGTAGCAACTACTCAACTCTGCTATCTGCAGGAAAGCACCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684461.1
CDS CCA 72 bp AGTTACTTTCTCTGCATTGGCTTCTTGCAAAGATTTTaGAACTGGGAAGCTACTGCCAGAGGAGTAGGTATT +
Preference number: 6 (lower is better)
Translates to: SYFLCIGFLQRF*NWEATARGVGI
Trigger: AATACCTACTCCTCTGGCAGTAGCTTCCCAGTTCCAAAATCTTTGCAAGAAGCCAATGCAGAGAAAGTAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CAA 72 bp ATCAGTGTGGGACAGTTGTCGTTGATGTCTTCAACATaGATAAGGACTGTGCCAGTGATGGTTTTTCTAGGA +
Preference number: 6 (lower is better)
Translates to: ISVGQLSLMSST*IRTVPVMVFLG
Trigger: TCCTAGAAAAACCATCACTGGCACAGTCCTTATCAATGTTGAAGACATCAACGACAACTGTCCCACACTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CAA 90 bp ACAGACCCAACAAAGACATCCTGTGTGAACACTGGTTCGTTGTCATaGATATCAAGAACCTTAATGCGTAGCTCTAAGGGTTTCTCTACA +
Preference number: 6 (lower is better)
Translates to: TDPTKTSCVNTGSLS*ISRTLMRSSKGFST
Trigger: TGTAGAGAAACCCTTAGAGCTACGCATTAAGGTTCTTGATATCAATGACAACGAACCAGTGTTCACACAGGATGTCTTTGTTGGGTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261590.13
ENST00000585206.1
ENST00000682087.1
ENST00000682241.1
ENST00000683614.1
ENST00000683654.1
ENST00000684461.1
CDS CAA 90 bp TCTTCAACAGACCCAACAAAGACATCCTGTGTGAACACTGGTTCGTaGTCATTGATATCAAGAACCTTAATGCGTAGCTCTAAGGGTTTC +
Preference number: 6 (lower is better)
Translates to: SSTDPTKTSCVNTGS*SLISRTLMRSSKGF
Trigger: GAAACCCTTAGAGCTACGCATTAAGGTTCTTGATATCAATGACAACGAACCAGTGTTCACACAGGATGTCTTTGTTGGGTCTGTTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261590.13
ENST00000585206.1
ENST00000682087.1
ENST00000682241.1
ENST00000683614.1
ENST00000683654.1
ENST00000684461.1
CDS TCA 72 bp GACCTGCTTTTCAGGACAACTAAAACCCTGATTGTCTaGAATCAGGAACTGAATTTCACTTCTCCCAAGCTT +
Preference number: 6 (lower is better)
Translates to: DLLFRTTKTLIV*NQELNFTSPKL
Trigger: AAGCTTGGGAGAAGTGAAATTCAGTTCCTGATTTCAGACAATCAGGGTTTTAGTTGTCCTGAAAAGCAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261590.13
CDS CAA 72 bp ACAAAGACATCCTGTGTGAACACTGGTTCGTTGTCATaGATATCAAGAACCTTAATGCGTAGCTCTAAGGGT +
Preference number: 6 (lower is better)
Translates to: TKTSCVNTGSLS*ISRTLMRSSKG
Trigger: ACCCTTAGAGCTACGCATTAAGGTTCTTGATATCAATGACAACGAACCAGTGTTCACACAGGATGTCTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261590.13
ENST00000585206.1
ENST00000682087.1
ENST00000682241.1
ENST00000683614.1
ENST00000683654.1
ENST00000684461.1
CDS CAA 72 bp CATATTGTCTATGGTGCTTTCCTGCAGATAGCAGAGTaGAGTAGTTGCTACAGAGACCTTATCCATCACATT +
Preference number: 6 (lower is better)
Translates to: HIVYGAFLQIAE*SSCYRDLIHHI
Trigger: AATGTGATGGATAAGGTCTCTGTAGCAACTACTCAACTCTGCTATCTGCAGGAAAGCACCATAGACAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684461.1
CDS CAA 90 bp AGTGTTCAGGGCTCAAAATATATTAGATTCCTTTCCAGCACCAACTaGGCCCACGCCAGTTTTGAATACTTAGTACTTACCTTAATAAGG +
Preference number: 6 (lower is better)
Translates to: SVQGSKYIRFLSSTN*AHASFEYLVLTLIR
Trigger: CCTTATTAAGGTAAGTACTAAGTATTCAAAACTGGCGTGGGCCAAGTTGGTGCTGGAAAGGAATCTAATATATTTTGAGCCCTGAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682087.1
CDS CAA 90 bp ATTTGTTTACATATTGTCTATGGTGCTTTCCTGCAGATAGCAGAGTaGAGTAGTTGCTACAGAGACCTTATCCATCACATTAATCTACCC +
Preference number: 6 (lower is better)
Translates to: ICLHIVYGAFLQIAE*SSCYRDLIHHINLP
Trigger: GGGTAGATTAATGTGATGGATAAGGTCTCTGTAGCAACTACTCAACTCTGCTATCTGCAGGAAAGCACCATAGACAATATGTAAACAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684461.1
CDS TCA 72 bp ATGGGTGTAGGCTTGTATTTACTCCTAATCGACTTGTaGAAAGCTGCTTTATTAGCGACAATAACACTGAAG +
Preference number: 6 (lower is better)
Translates to: MGVGLYLLLIDL*KAALLATITLK
Trigger: CTTCAGTGTTATTGTCGCTAATAAAGCAGCTTTTCACAAGTCGATTAGGAGTAAATACAAGCCTACACCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261590.13
ENST00000683614.1
CDS CAA 72 bp GTCATTGACATCCAAAATACGAATCTGAACTTGAGCTaGTTTTACAGGTTTGTCTGTAACTTCTCCATTGCC +
Preference number: 6 (lower is better)
Translates to: VIDIQNTNLNLS*FYRFVCNFSIA
Trigger: GGCAATGGAGAAGTTACAGACAAACCTGTAAAACAAGCTCAAGTTCAGATTCGTATTTTGGATGTCAATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261590.13
ENST00000682087.1
ENST00000683614.1
CDS CAA 90 bp AGGTATATTGTCATTGACATCCAAAATACGAATCTGAACTTGAGCTaGTTTTACAGGTTTGTCTGTAACTTCTCCATTGCCATCTCTTGC +
Preference number: 6 (lower is better)
Translates to: RYIVIDIQNTNLNLS*FYRFVCNFSIAISC
Trigger: GCAAGAGATGGCAATGGAGAAGTTACAGACAAACCTGTAAAACAAGCTCAAGTTCAGATTCGTATTTTGGATGTCAATGACAATATACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261590.13
ENST00000682087.1
ENST00000683614.1
CDS TCA 72 bp TCGAACACTTTTATGCGCGTAACTTCTACGTTGACTTaGTTTTCTTCAACCATCCCTTCAAGCACTTTATTT +
Preference number: 6 (lower is better)
Translates to: SNTFMRVTSTLT*FSSTIPSSTLF
Trigger: AAATAAAGTGCTTGAAGGGATGGTTGAAGAAAATCAAGTCAACGTAGAAGTTACGCGCATAAAAGTGTTCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261590.13
ENST00000682087.1
ENST00000683614.1
CDS TCA 72 bp TGGCTCCTTTCTCAAACAACTGTAGTGCTAGTTAATTaGATATGTAAAGCACTTTTAAGTGTTCAGGGCTCA +
Preference number: 6 (lower is better)
Translates to: WLLSQTTVVLVN*ICKALLSVQGS
Trigger: TGAGCCCTGAACACTTAAAAGTGCTTTACATATTCAATTAACTAGCACTACAGTTGTTTGAGAAAGGAGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682087.1
CDS GCA 72 bp ATAGGAAATTTTCGAATTCAGGGTATTGGGCTCATCTaGATCTGTTGCATTGATTTTCATCACAAGAGTATG +
Preference number: 6 (lower is better)
Translates to: IGNFRIQGIGLI*ICCIDFHHKSM
Trigger: CATACTCTTGTGATGAAAATCAATGCAACAGATGCAGATGAGCCCAATACCCTGAATTCGAAAATTTCCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261590.13
ENST00000585206.1
ENST00000682087.1
ENST00000682241.1
ENST00000683614.1
ENST00000683654.1
CDS GCA 72 bp AAAATTTGCCAGCCAATTATCAGAACCTATTTCATCTaGATCGAACACTTTTATGCGCGTAACTTCTACGTT +
Preference number: 6 (lower is better)
Translates to: KICQPIIRTYFI*IEHFYARNFYV
Trigger: AACGTAGAAGTTACGCGCATAAAAGTGTTCGATGCAGATGAAATAGGTTCTGATAATTGGCTGGCAAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261590.13
ENST00000682087.1
ENST00000683614.1
CDS GCA 72 bp ATAGGAAATTTTCGAATTCAGGGTATTGGGCTCATCTaGATCTGTTGCATTGATTTTCATCACAAGAGTATC +
Preference number: 6 (lower is better)
Translates to: IGNFRIQGIGLI*ICCIDFHHKSI
Trigger: GATACTCTTGTGATGAAAATCAATGCAACAGATGCAGATGAGCCCAATACCCTGAATTCGAAAATTTCCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684461.1
CDS CAA 72 bp ATCGAACACTTTTATGCGCGTAACTTCTACGTTGACTaGATTTTCTTCAACCATCCCTTCAAGCACTTTATT +
Preference number: 6 (lower is better)
Translates to: IEHFYARNFYVD*IFFNHPFKHFI
Trigger: AATAAAGTGCTTGAAGGGATGGTTGAAGAAAATCAAGTCAACGTAGAAGTTACGCGCATAAAAGTGTTCGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261590.13
ENST00000682087.1
ENST00000683614.1
CDS CAA 72 bp ACTTACCTTAATAAGGGTCACAATTCCTTCGTTAGTTaGAGCATCTGTTTCTATGTGGAAATAACCTCCTTC +
Preference number: 6 (lower is better)
Translates to: TYLNKGHNSFVS*SICFYVEITSF
Trigger: GAAGGAGGTTATTTCCACATAGAAACAGATGCTCAAACTAACGAAGGAATTGTGACCCTTATTAAGGTAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682087.1
CDS CAA 90 bp TCTTCTCGATCAAGAATGCTGGTAACATTCAGTTCTCCAGTATCTTaGTTAAAGACAAATATACCAAAAGGTGGCTCTGTAATCCCTTTT +
Preference number: 6 (lower is better)
Translates to: SSRSRMLVTFSSPVS*LKTNIPKGGSVIPF
Trigger: AAAAGGGATTACAGAGCCACCTTTTGGTATATTTGTCTTTAACAAAGATACTGGAGAACTGAATGTTACCAGCATTCTTGATCGAGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261590.13
ENST00000585206.1
ENST00000682087.1
ENST00000682241.1
ENST00000683614.1
ENST00000683654.1
ENST00000684461.1
CDS CAA 90 bp AAAAAGGCAGGGTTCATTATTCTTCCAGGCAGAACACACAATCTTTaGATGTATTCATGGCCCCTAAACAAACAAACAAACAAACAAACA +
Preference number: 6 (lower is better)
Translates to: KKAGFIILPGRTHNL*MYSWPLNKQTNKQT
Trigger: TGTTTGTTTGTTTGTTTGTTTGTTTAGGGGCCATGAATACATCAAAAGATTGTGTGTTCTGCCTGGAAGAATAATGAACCCTGCCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683614.1
CDS CAA 72 bp TCAAGAATGCTGGTAACATTCAGTTCTCCAGTATCTTaGTTAAAGACAAATATACCAAAAGGTGGCTCTGTA +
Preference number: 6 (lower is better)
Translates to: SRMLVTFSSPVS*LKTNIPKGGSV
Trigger: TACAGAGCCACCTTTTGGTATATTTGTCTTTAACAAAGATACTGGAGAACTGAATGTTACCAGCATTCTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261590.13
ENST00000585206.1
ENST00000682087.1
ENST00000682241.1
ENST00000683614.1
ENST00000683654.1
ENST00000684461.1
CDS TCA 72 bp ATCTGTTTCTATGTGGAAATAACCTCCTTCATTTCCTaGTGCAAATGTAAAATTTGCCAGCCAATTATCAGA +
Preference number: 6 (lower is better)
Translates to: ICFYVEITSFIS*CKCKICQPIIR
Trigger: TCTGATAATTGGCTGGCAAATTTTACATTTGCATCAGGAAATGAAGGAGGTTATTTCCACATAGAAACAGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261590.13
ENST00000682087.1
ENST00000683614.1
CDS CCA 72 bp TCCAGTATCTTTGTTAAAGACAAATATACCAAAAGGTaGCTCTGTAATCCCTTTTCCAGTGTATTTGTAAGT +
Preference number: 6 (lower is better)
Translates to: SSIFVKDKYTKR*LCNPFSSVFVS
Trigger: ACTTACAAATACACTGGAAAAGGGATTACAGAGCCACCTTTTGGTATATTTGTCTTTAACAAAGATACTGGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261590.13
ENST00000585206.1
ENST00000682087.1
ENST00000682241.1
ENST00000683614.1
ENST00000683654.1
ENST00000684461.1
CDS CAA 72 bp TATATTGTCATTGACATCCAAAATACGAATCTGAACTaGAGCTTGTTTTACAGGTTTGTCTGTAACTTCTCC +
Preference number: 6 (lower is better)
Translates to: YIVIDIQNTNLN*SLFYRFVCNFS
Trigger: GGAGAAGTTACAGACAAACCTGTAAAACAAGCTCAAGTTCAGATTCGTATTTTGGATGTCAATGACAATATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261590.13
ENST00000682087.1
ENST00000683614.1