RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DSEL (Homo sapiens)

Ensembl gene IDs: ENSG00000171451, ENSG00000262102

Ensembl transcript IDs: ENST00000310045.8, ENST00000310045.9, ENST00000572659.1

Found 352 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTGTTTTGCTTGACAGTGACAGAAAGGATAGGATGGGAGTGATGTaGTGGCGAACAGCTGTAGCTCCAGGGAGGATAAAAAGTGAAAGG +
Preference number: 1 (lower is better)
Translates to: IVLLDSDRKDRMGVM*WRTAVAPGRIKSER
Trigger: CCTTTCACTTTTTATCCTCCCTGGAGCTACAGCTGTTCGCCATCACATCACTCCCATCCTATCCTTTCTGTCACTGTCAAGCAAAACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR TCA 90 bp TTTGAATACATTTGCAGAGGGCAATGTAGCAAGACCTGGGAATTTTaGTACAAGGAAGGATTGTCCCATTCTTGTCAGGCATTTATTAGT +
Preference number: 1 (lower is better)
Translates to: FEYICRGQCSKTWEF*YKEGLSHSCQAFIS
Trigger: ACTAATAAATGCCTGACAAGAATGGGACAATCCTTCCTTGTATCAAAATTCCCAGGTCTTGCTACATTGCCCTCTGCAAATGTATTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR TCA 90 bp ATCCAAGTAGCATTTTATATGCTTGCCGGTAACTCTGAGATAGAATaGATAATCTTTCTTGAGATTACTAGTGTAGATTCAGGTCTTCAG +
Preference number: 1 (lower is better)
Translates to: IQVAFYMLAGNSEIE*IIFLEITSVDSGLQ
Trigger: CTGAAGACCTGAATCTACACTAGTAATCTCAAGAAAGATTATTCATTCTATCTCAGAGTTACCGGCAAGCATATAAAATGCTACTTGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR GCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCGCCCAGGCTGGAGTaGAGTGGCGCATCTCCACTC +
Preference number: 2 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQSPRLE*SGASPL
Trigger: GAGTGGAGATGCGCCACTGCACTCCAGCCTGGGCGA...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGAGGATGGGAGTGATGTaGTGGCGAACAGCTGTAGCT +
Preference number: 2 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWRMGVM*WRTAVA
Trigger: AGCTACAGCTGTTCGCCATCACATCACTCCCATCCT...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTAGGATGGGAGTGATGTaGTGGCGAACAGCTGTAGCT +
Preference number: 2 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVRMGVM*WRTAVA
Trigger: AGCTACAGCTGTTCGCCATCACATCACTCCCATCCT...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAATGGTCTTGATCTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 2 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQMVLIS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGATCAAGACCAT...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR GCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAACGCATCTCCACTCACTaGAAGCTCTGCCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQRISTH*KLCLPG
Trigger: ACCTGGGAGGCAGAGCTTGCAGTGAGTGGAGATGCG...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGTCTCCCCTGACCCCATaGTATAACTTCATCTACCAC +
Preference number: 2 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWSPLTP*YNFIYH
Trigger: GTGGTAGATGAAGTTATATCATGGGGTCAGGGGAGA...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGAAGGATAGGATGGGAGTaGTGTGATGGCGAACAGCTG +
Preference number: 2 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGRIGWE*CDGEQL
Trigger: CAGCTGTTCGCCATCACATCACTCCCATCCTATCCT...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTGGAAACAGATGCCTCTaGCATCATCTCCCATTTGCT +
Preference number: 2 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVGNRCL*HHLPFA
Trigger: AGCAAATGGGAGATGATGTCAGAGGCATCTGTTTCC...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR GCA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGAACTCACTGCAAGCTCTaGCTCCCAGGTTCATGCCAT +
Preference number: 2 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGTHCKL*LPGSCH
Trigger: ATGGCATGAACCTGGGAGGCAGAGCTTGCAGTGAGT...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR GCA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGCATCTGGCCTTCTCCTaGCAACAGGTACATTTCTTT +
Preference number: 2 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWHLAFS*QQVHFF
Trigger: AAAGAAATGTACCTGTTGGCAGGAGAAGGCCAGATG...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCCACATACTCCATCTaGCCTTCTCCTGCCAACAGG +
Preference number: 2 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQSTYSI*PSPANR
Trigger: CCTGTTGGCAGGAGAAGGCCAGATGGAGTATGTGGA...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAACTGTGCAAACAACACTaGACACATACACGCGTGCAC +
Preference number: 2 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQLCKQH*THTRVH
Trigger: GTGCACGCGTGTATGTGTTCAGTGTTGTTTGCACAG...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGAATTGCCATGTGGGGGTaGAAGCTGGGATACATTGTA +
Preference number: 2 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGIAMWG*KLGYIV
Trigger: TACAATGTATCCCAGCTTTCACCCCCACATGGCAAT...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTAAAAAGACACTGCAGTaGCACTACTTTGAGTCACAG +
Preference number: 2 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVKKTLQ*HYFESQ
Trigger: CTGTGACTCAAAGTAGTGCCACTGCAGTGTCTTTTT...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTGCGATTAGTAACTACTaGTTGTTTTGCTTGACAGTG +
Preference number: 2 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVAISNY*LFCLTV
Trigger: CACTGTCAAGCAAAACAATCAGTAGTTACTAATCGC...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGAATGGCGTAGCATTTTaGTTTCAGAGCCTACCAAAA +
Preference number: 2 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWNGVAF*FQSLPK
Trigger: TTTTGGTAGGCTCTGAAATCAAAATGCTACGCCATT...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAATTGCCATGTGGGGGTaGAAGCTGGGATACATTGTA +
Preference number: 2 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQIAMWG*KLGYIV
Trigger: TACAATGTATCCCAGCTTTCACCCCCACATGGCAAT...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGATGGGGTGGGAGTAGGTaGGTACAGAAACAAGTAAAT +
Preference number: 2 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGWGGSR*VQKQVN
Trigger: ATTTACTTGTTTCTGTACTCACCTACTCCCACCCCA...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTAACTTTTGCAGACACTaGCAGTCTGTAAACTCATTC +
Preference number: 2 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVNFCRH*QSVNSF
Trigger: GAATGAGTTTACAGACTGCCAGTGTCTGCAAAAGTT...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR GCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTAGTTTAAAAAGACACTaGAGTGGCACTACTTTGAGT +
Preference number: 2 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVSLKRH*SGTTLS
Trigger: ACTCAAAGTAGTGCCACTGCAGTGTCTTTTTAAACT...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR GCA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGACATCATCTCCCATTTaGTTTCAACTTTTGCAGACA +
Preference number: 2 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWTSSPI*FQLLQT
Trigger: TGTCTGCAAAAGTTGAAAGCAAATGGGAGATGATGT...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR GCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAGATTCAGGTCTTCAGTaGCCTCTCAACCTACATTCA +
Preference number: 2 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQDSGLQ*PLNLHS
Trigger: TGAATGTAGGTTGAGAGGGCACTGAAGACCTGAATC...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR CAA 90 bp AGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTaGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGA +
Preference number: 2 (lower is better)
Translates to: RKQMPLTSSPICFQL*QTLAVCKLIQRDAR
Trigger: TCTTGCATCCCTTTGAATGAGTTTACAGACTGCCAGTGTCTGCAAAAGTTGAAAGCAAATGGGAGATGATGTCAGAGGCATCTGTTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTCAAGTTAGGTTTAGCTaGAATCTAACATATACAGAG +
Preference number: 2 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVQVRFS*NLTYTE
Trigger: CTCTGTATATGTTAGATTCCAGCTAAACCTAACTTG...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGAAGGGAGGATAAAAAGTaGAAGGAGAGTTTTAAACAG +
Preference number: 2 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGREDKK*KESFKQ
Trigger: CTGTTTAAAACTCTCCTTTCACTTTTTATCCTCCCT...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAAGGATAGGATGGGAGTaGTGTGATGGCGAACAGCTG +
Preference number: 2 (lower is better)
Translates to: YVFIQYIVITPLAYNGVARIGWE*CDGEQL
Trigger: CAGCTGTTCGCCATCACATCACTCCCATCCTATCCT...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAGCGATTAGTAACTACTaGTTGTTTTGCTTGACAGTG +
Preference number: 2 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQAISNY*LFCLTV
Trigger: CACTGTCAAGCAAAACAATCAGTAGTTACTAATCGC...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAAATGGCGTAGCATTTTaGTTTCAGAGCCTACCAAAA +
Preference number: 2 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQNGVAF*FQSLPK
Trigger: TTTTGGTAGGCTCTGAAATCAAAATGCTACGCCATT...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR GCA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGAATCAAGTCTCCACACTaGCTTATGTTTTCATCCAAT +
Preference number: 2 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGIKSPH*LMFSSN
Trigger: ATTGGATGAAAACATAAGGCAGTGTGGAGACTTGAT...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR GCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAAATCAAGTCTCCACACTaGCTTATGTTTTCATCCAAT +
Preference number: 2 (lower is better)
Translates to: VLESLGEPQFETSGRRLQIKSPH*LMFSSN
Trigger: ATTGGATGAAAACATAAGGCAGTGTGGAGACTTGAT...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR CAA 90 bp GAACAATTATGCCAACCAAAAGTAAGTGGTGGAGGAGGTTCTTCTTaGAATACATTTGCAGAGGGCAATGTAGCAAGACCTGGGAATTTT +
Preference number: 2 (lower is better)
Translates to: EQLCQPKVSGGGGSS*NTFAEGNVARPGNF
Trigger: AAAATTCCCAGGTCTTGCTACATTGCCCTCTGCAAATGTATTCAAAGAAGAACCTCCTCCACCACTTACTTTTGGTTGGCATAATTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCACTGTGCAAACAACACTaGACACATACACGCGTGCAC +
Preference number: 2 (lower is better)
Translates to: YVFIQYIVITPLAYNGVALCKQH*THTRVH
Trigger: GTGCACGCGTGTATGTGTTCAGTGTTGTTTGCACAG...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGTCTCCCCTGACCCCATaGTATAACTTCATCTACCAC +
Preference number: 2 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKSPLTP*YNFIYH
Trigger: GTGGTAGATGAAGTTATATCATGGGGTCAGGGGAGA...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR GCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAACATCATCTCCCATTTaGTTTCAACTTTTGCAGACA +
Preference number: 2 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQTSSPI*FQLLQT
Trigger: TGTCTGCAAAAGTTGAAAGCAAATGGGAGATGATGT...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CCA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGACAAGTTAGGTTTAGCTaGAATCTAACATATACAGAG +
Preference number: 2 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGQVRFS*NLTYTE
Trigger: CTCTGTATATGTTAGATTCCAGCTAAACCTAACTTG...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAGGAAACAGATGCCTCTaGCATCATCTCCCATTTGCT +
Preference number: 2 (lower is better)
Translates to: YVFIQYIVITPLAYNGVAGNRCL*HHLPFA
Trigger: AGCAAATGGGAGATGATGTCAGAGGCATCTGTTTCC...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCATTTTGTAGTCCATCTTaGAAGCAAGAGATGCGTGGG +
Preference number: 2 (lower is better)
Translates to: YVFIQYIVITPLAYNGVAFCSPS*KQEMRG
Trigger: CCCACGCATCTCTTGCTTTCAAGATGGACTACAAAA...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGAAAGCAAGAGATGCGTaGGTAAAGCAGCAATTGCAA +
Preference number: 2 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKKARDA*VKQQLQ
Trigger: TTGCAATTGCTGCTTTACCCACGCATCTCTTGCTTT...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTAACAGAGGGACAATCATaGGAGATATGGGAAGGAATA +
Preference number: 2 (lower is better)
Translates to: LPNNGNSVINHVACNIHVTEGQS*EIWEGI
Trigger: TATTCCTTCCCATATCTCTCATGATTGTCCCTCTGT...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTAAAAAAGACACTGCAGTaGCACTACTTTGAGTCACAG +
Preference number: 2 (lower is better)
Translates to: LPNNGNSVINHVACNIHVKKTLQ*HYFESQ
Trigger: CTGTGACTCAAAGTAGTGCCACTGCAGTGTCTTTTT...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTAAACTTTTGCAGACACTaGCAGTCTGTAAACTCATTC +
Preference number: 2 (lower is better)
Translates to: LPNNGNSVINHVACNIHVNFCRH*QSVNSF
Trigger: GAATGAGTTTACAGACTGCCAGTGTCTGCAAAAGTT...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR TCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTAAGGGAGGATAAAAAGTaGAAGGAGAGTTTTAAACAG +
Preference number: 2 (lower is better)
Translates to: LPNNGNSVINHVACNIHVREDKK*KESFKQ
Trigger: CTGTTTAAAACTCTCCTTTCACTTTTTATCCTCCCT...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR GCA 72 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATaGATACATACCCAATGGATGTGTCACCCGCTCACC +
Preference number: 3 (lower is better)
Translates to: SVSKAGVSGTIT*IHTQWMCHPLT
Trigger: GGTGAGCGGGTGACACATCCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CAA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGAAATACAACTCTGCATaGCCATGTGGGGGTGAAAGC +
Preference number: 3 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWKYNSA*PCGGES
Trigger: GCTTTCACCCCCACATGGCAATGCAGAGTTGTATTT...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR TCA 72 bp CTTGACAGTGACAGAAAGGATAGGATGGGAGTGATGTaGTGGCGAACAGCTGTAGCTCCAGGGAGGATAAAA +
Preference number: 3 (lower is better)
Translates to: LDSDRKDRMGVM*WRTAVAPGRIK
Trigger: TTTTATCCTCCCTGGAGCTACAGCTGTTCGCCATCACATCACTCCCATCCTATCCTTTCTGTCACTGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CAA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGCCCTTGCCACCCAGATaGTTCAAAGACTTATTCCTT +
Preference number: 3 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWPLPPR*FKDLFL
Trigger: AAGGAATAAGTCTTTGAACAATCTGGGTGGCAAGGG...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CAA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGTGCAGTGGCACTACTTaGAGTCACAGAGTGTTAATT +
Preference number: 3 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWCSGTT*SHRVLI
Trigger: AATTAACACTCTGTGACTCAAAGTAGTGCCACTGCA...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CAA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGTTTCTGCTTTCTTGCTaGCTACCTGCATGCAATTGT +
Preference number: 3 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWFLLSC*LPACNC
Trigger: ACAATTGCATGCAGGTAGCAAGCAAGAAAGCAGAAA...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CAA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTAAATGCCCCACAATATaGAGAGTTCAGCGATTAGTA +
Preference number: 3 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVKCPTI*RVQRLV
Trigger: TACTAATCGCTGAACTCTCAATATTGTGGGGCATTT...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CAA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAAAATACAACTCTGCATaGCCATGTGGGGGTGAAAGC +
Preference number: 3 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQKYNSA*PCGGES
Trigger: GCTTTCACCCCCACATGGCAATGCAGAGTTGTATTT...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR TCA 72 bp CTTCCAAGTGTTAGAGAGCTTGGGGGAACCACAGTTTaGAACATCAGGAAGAAGACTGCAATCTGTACAGAG +
Preference number: 3 (lower is better)
Translates to: LPSVRELGGTTV*NIRKKTAICTE
Trigger: CTCTGTACAGATTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACACTTGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CAA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAAGACATCATCTCCCATTaGCTTTCAACTTTTGCAGAC +
Preference number: 3 (lower is better)
Translates to: VLESLGEPQFETSGRRLQDIISH*LSTFAD
Trigger: GTCTGCAAAAGTTGAAAGCAAATGGGAGATGATGTC...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CAA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGATTTCTGCTTTCTTGCTaGCTACCTGCATGCAATTGT +
Preference number: 3 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGFLLSC*LPACNC
Trigger: ACAATTGCATGCAGGTAGCAAGCAAGAAAGCAGAAA...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR TCA 72 bp ATTTGCAGAGGGCAATGTAGCAAGACCTGGGAATTTTaGTACAAGGAAGGATTGTCCCATTCTTGTCAGGCA +
Preference number: 3 (lower is better)
Translates to: ICRGQCSKTWEF*YKEGLSHSCQA
Trigger: TGCCTGACAAGAATGGGACAATCCTTCCTTGTATCAAAATTCCCAGGTCTTGCTACATTGCCCTCTGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CAA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATGCAGTGGCACTACTTaGAGTCACAGAGTGTTAATT +
Preference number: 3 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQCSGTT*SHRVLI
Trigger: AATTAACACTCTGTGACTCAAAGTAGTGCCACTGCA...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CAA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAATATCCACAAAGTGGGTaGGTAAGTATTATTAGTGCA +
Preference number: 3 (lower is better)
Translates to: VLESLGEPQFETSGRRLQYPQSG*VSIISA
Trigger: TGCACTAATAATACTTACCAACCCACTTTGTGGATA...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR CCA 72 bp CATCATCTCCCATTTGCTTTCAACTTTTGCAGACACTaGCAGTCTGTAAACTCATTCAAAGGGATGCAAGAT +
Preference number: 3 (lower is better)
Translates to: HHLPFAFNFCRH*QSVNSFKGMQD
Trigger: ATCTTGCATCCCTTTGAATGAGTTTACAGACTGCCAGTGTCTGCAAAAGTTGAAAGCAAATGGGAGATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CAA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTACAAGTGTTAGAGAGCTaGGGGGAACCACAGTTTGAA +
Preference number: 3 (lower is better)
Translates to: LPNNGNSVINHVACNIHVQVLES*GEPQFE
Trigger: TTCAAACTGTGGTTCCCCCAAGCTCTCTAACACTTG...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR TCA 72 bp ATGGCGAACAGCTGTAGCTCCAGGGAGGATAAAAAGTaGAAGGAGAGTTTTAAACAGACAATCATGTCTAAA +
Preference number: 3 (lower is better)
Translates to: MANSCSSREDKK*KESFKQTIMSK
Trigger: TTTAGACATGATTGTCTGTTTAAAACTCTCCTTTCACTTTTTATCCTCCCTGGAGCTACAGCTGTTCGCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CAA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCACCCTTGCCACCCAGATaGTTCAAAGACTTATTCCTT +
Preference number: 3 (lower is better)
Translates to: YVFIQYIVITPLAYNGVAPLPPR*FKDLFL
Trigger: AAGGAATAAGTCTTTGAACAATCTGGGTGGCAAGGG...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CAA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAATAATCTACCAGCCCTaGCCACCCAGATTGTTCAAA +
Preference number: 3 (lower is better)
Translates to: YVFIQYIVITPLAYNGVAIIYQP*PPRLFK
Trigger: TTTGAACAATCTGGGTGGCAAGGGCTGGTAGATTAT...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR CCA 72 bp TTCCAATTCTGTTTCCAGTTTAAAAAGACACTGCAGTaGCACTACTTTGAGTCACAGAGTGTTAATTCCAGA +
Preference number: 3 (lower is better)
Translates to: FQFCFQFKKTLQ*HYFESQSVNSR
Trigger: TCTGGAATTAACACTCTGTGACTCAAAGTAGTGCCACTGCAGTGTCTTTTTAAACTGGAAACAGAATTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CAA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTAGACATCATCTCCCATTaGCTTTCAACTTTTGCAGAC +
Preference number: 3 (lower is better)
Translates to: LPNNGNSVINHVACNIHVDIISH*LSTFAD
Trigger: GTCTGCAAAAGTTGAAAGCAAATGGGAGATGATGTC...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR TCA 72 bp CATTTTCGTAAGCCTGTACCTTTCTTTTGCTATCAATaGCGTGTTCCCATATTCATTCTCAGTGTAACTCAT +
Preference number: 3 (lower is better)
Translates to: HFRKPVPFFCYQ*RVPIFILSVTH
Trigger: ATGAGTTACACTGAGAATGAATATGGGAACACGTCATTGATAGCAAAAGAAAGGTACAGGCTTACGAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR GCA 72 bp CAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGACACTaGAGTGGCACTACTTTGAGTCACAGAGTGTTAATT +
Preference number: 3 (lower is better)
Translates to: QFSNSVSSLKRH*SGTTLSHRVLI
Trigger: AATTAACACTCTGTGACTCAAAGTAGTGCCACTGCAGTGTCTTTTTAAACTGGAAACAGAATTGGAAAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR GCA 72 bp TTTCTTGAGATTACTAGTGTAGATTCAGGTCTTCAGTaGCCTCTCAACCTACATTCACATGAATTTCATTCA +
Preference number: 3 (lower is better)
Translates to: FLEITSVDSGLQ*PLNLHSHEFHS
Trigger: TGAATGAAATTCATGTGAATGTAGGTTGAGAGGGCACTGAAGACCTGAATCTACACTAGTAATCTCAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CAA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTAAAATGCCCCACAATATaGAGAGTTCAGCGATTAGTA +
Preference number: 3 (lower is better)
Translates to: LPNNGNSVINHVACNIHVKCPTI*RVQRLV
Trigger: TACTAATCGCTGAACTCTCAATATTGTGGGGCATTT...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR-3UTR CAA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTATATCCACAAAGTGGGTaGGTAAGTATTATTAGTGCA +
Preference number: 3 (lower is better)
Translates to: LPNNGNSVINHVACNIHVYPQSG*VSIISA
Trigger: TGCACTAATAATACTTACCAACCCACTTTGTGGATA...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
3UTR TCA 72 bp TATACTTTGTATACCAAGAATGCCAAAGATACTTGGTaGTGTACAGAAATCGTTGCTGAACAATTATGCCAA +
Preference number: 3 (lower is better)
Translates to: YTLYTKNAKDTW*CTEIVAEQLCQ
Trigger: TTGGCATAATTGTTCAGCAACGATTTCTGTACATCACCAAGTATCTTTGGCATTCTTGGTATACAAAGTATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
CDS-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAACGCGTGCCCAGGCGGTaGTGTCGCCGCGGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQRVPRR*CRRGRG
Trigger: TCCTCGGCCGCGGCGACATCACCGCCTGGGCACGCG...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAACGCTACGGCAGGCGCTaGCCCAGCTCGGTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQRYGRR*PSSVSS
Trigger: TGAGGAGACCGAGCTGGGGCAGCGCCTGCCGTAGCG...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTTCGCCCAGGCTGGAGTaGAGTGGCGCATCTCCACTC +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVSPRLE*SGASPL
Trigger: GAGTGGAGATGCGCCACTGCACTCCAGCCTGGGCGA...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGTTTGGGAGGCCCAGGTaGGCAGATCACCAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWFGRPR*ADHQVK
Trigger: CTTGACCTGGTGATCTGCCCACCTGGGCCTCCCAAA...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCCAGAAAACTGCTCTaGACGGCGGGCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQSRKLL*TAGQAP
Trigger: GGGAGCCTGGCCCGCCGTGCAGAGCAGTTTTCTGGA...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGACCGGTAGGCGGAGGTTaGAGTGAGCCGAGATCAGAC +
Preference number: 4 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGPVGGG*SEPRSD
Trigger: GTCTGATCTCGGCTCACTGCAACCTCCGCCTACCGG...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGGGCTCGGCGCCGCACTaGGCCCCAAGGGAGACGGAG +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKGSAPH*APRETE
Trigger: CTCCGTCTCCCTTGGGGCCCAGTGCGGCGCCGAGCC...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGACCATAATCAGCAGGTaGCTGTGGTGTGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWTIISR*LWCELG
Trigger: CCCCAGCTCACACCACAGCCACCTGCTGATTATGGT...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTCCCACTGCGGATATCTaGCACCTTCCATTCACAAGC +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVPTADI*HLPFTS
Trigger: GCTTGTGAATGGAAGGTGTCAGATATCCGCAGTGGG...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGAGGATAGGATGGGAGTaGTGTGATGGCGAACAGCTG +
Preference number: 4 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWRIGWE*CDGEQL
Trigger: CAGCTGTTCGCCATCACATCACTCCCATCCTATCCT...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTTCCACATACTCCATCTaGCCTTCTCCTGCCAACAGG +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVSTYSI*PSPANR
Trigger: CCTGTTGGCAGGAGAAGGCCAGATGGAGTATGTGGA...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAACTTCTCGTCCGATCATaGAGTAACCGCCAACGGGGA +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQLLVRS*SNRQRG
Trigger: TCCCCGTTGGCGGTTACTTCATGATCGGACGAGAAG...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGGCACATTCTCCCAGTTaGCCTTCCCAGGGCTTATTA +
Preference number: 4 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWAHSPS*PSQGLL
Trigger: TAATAAGCCCTGGGAAGGTCAACTGGGAGAATGTGC...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTAAGAGCAGCGCCCGCGTaGCCAGGCGGTGATGTCGCC +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVRAAPA*PGGDVA
Trigger: GGCGACATCACCGCCTGGGCACGCGGGCGCTGCTCT...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGACAGGACCTGGGAACATaGTGGGAGAGTCAATCCCCT +
Preference number: 4 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGQDLGT*WESQSP
Trigger: AGGGGATTGACTCTCCCAGCATGTTCCCAGGTCCTG...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAGCCGAGGATCCTCTGTaGCAGCTCCGGCCGCGCAGC +
Preference number: 4 (lower is better)
Translates to: YVFIQYIVITPLAYNGVAAEDPL*QLRPRS
Trigger: GCTGCGCGGCCGGAGCTGGCACAGAGGATCCTCGGC...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTTGCATACATACCCAATaGATGTGTCACCCGCTCACC +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVCIHTQ*MCHPLT
Trigger: GGTGAGCGGGTGACACATCCATTGGGTATGTATGCA...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAACCACCTTTGGGCAGTTaGAGGAACCATCGGTCCATC +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQPPLGS*RNHRSI
Trigger: GATGGACCGATGGTTCCTTCAACTGCCCAAAGGTGG...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGATATGGAGAAGCTGTTTaGCCCATGAGCGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGYGEAV*PMSGPW
Trigger: CCAAGGTCCGCTCATGGGGCAAACAGCTTCTCCATA...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATTCATGCCATTCTCCTaGCTCAGCCTCCCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQFMPFS*LSLPCS
Trigger: GCTACACGGGAGGCTGAGGCAGGAGAATGGCATGAA...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGGGCGGGTTCTCTCGGTaGCGCCGTATCCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKGGFSR*RRIQSS
Trigger: GCTGCTCTGGATACGGCGCCACCGAGAGAACCCGCC...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGAACGCCGGACGCTTGTaGGGGCAACCACGGACCGCA +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKNAGRL*GQPRTA
Trigger: TGCGGTCCGTGGTTGCCCCCACAAGCGTCCGGCGTT...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAAATCAGCAGGTGGCTGTaGTGTGAGCTGGGGATCATA +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQISRWL*CELGII
Trigger: TATGATCCCCAGCTCACACCACAGCCACCTGCTGAT...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTCTGCTTCCTGTATACTaGCCATGGGACTATTGCCAT +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVLLPVY*PWDYCH
Trigger: ATGGCAATAGTCCCATGGCCAGTATACAGGAAGCAG...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGCACAGGACGTGCACTTaGATAGTAAACCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWHRTCT*IVNQVS
Trigger: AGACACCTGGTTTACTATCCAAGTGCACGTCCTGTG...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAAAGCTGTTTGCCCCATaGGCGGACCTTGGAATACTC +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQKLFAP*ADLGIL
Trigger: GAGTATTCCAAGGTCCGCTCATGGGGCAAACAGCTT...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTACCATTTCCCCATGTTaGGAGGCAGTGATTATTTCC +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVTISPC*EAVIIS
Trigger: GGAAATAATCACTGCCTCTCAACATGGGGAAATGGT...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTTTTCAGTCTCATTGCTaGAGAATAAGCAGACACGGC +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVFQSHC*RISRHG
Trigger: GCCGTGTCTGCTTATTCTTCAGCAATGAGACTGAAA...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAACGGGTTATTTGGCCTTaGTCAGCCACACTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQRVIWP*SATLAK
Trigger: CTTTGCCAGTGTGGCTGATCAAGGCCAAATAACCCG...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAACTGTGCAAACAACACTaGACACATACACGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQLCKQH*THTRVH
Trigger: GTGCACGCGTGTATGTGTTCAGTGTTGTTTGCACAG...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGTGGGGTGGGAGTAGGTaGGTACAGAAACAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWWGGSR*VQKQVN
Trigger: ATTTACTTGTTTCTGTACTCACCTACTCCCACCCCA...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTGATTCAGGTCTTCAGTaGCCTCTCAACCTACATTCA +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVDSGLQ*PLNLHS
Trigger: TGAATGTAGGTTGAGAGGGCACTGAAGACCTGAATC...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGCATTCTTCGAGTGAGTaGACTCAGTTGTCATTCCTC +
Preference number: 4 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWHSSSE*TQLSFL
Trigger: GAGGAATGACAACTGAGTCCACTCACTCGAAGAATG...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAAGTGGCTTGGTGGTTATaGAGAAGCTGTTTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQVAWWL*RSCLPH
Trigger: ATGGGGCAAACAGCTTCTCCATAACCACCAAGCCAC...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGAGGCTGTGGTGTGAGCTaGGGATCATACCAGATGTAT +
Preference number: 4 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGGCGVS*GSYQMY
Trigger: ATACATCTGGTATGATCCCCAGCTCACACCACAGCC...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAAGTTGGTCTGTGTGTTTaGCAACCCAGCCCCATAAGT +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQVGLCV*QPSPIS
Trigger: ACTTATGGGGCTGGGTTGCCAAACACACAGACCAAC...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGCCTGTATACTGGCCATaGGACTATTGCCATGATGAT +
Preference number: 4 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWPVYWP*DYCHDD
Trigger: ATCATCATGGCAATAGTCCCATGGCCAGTATACAGG...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAACCCTTTCAGCAACAGTaGGGTCTCTCTTCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQPFQQQ*GLSSAL
Trigger: AAGAGCAGAAGAGAGACCTCACTGTTGCTGAAAGGG...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAACATGTTGAGAGGCAGTaGTTATTTCCCCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQHVERQ*LFPQLH
Trigger: ATGCAGCTGGGGAAATAATCACTGCCTCTCAACATG...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAATTTGCACAAATGGGCTaGCTACAAGTGCTCCACACA +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQFAQMG*LQVLHT
Trigger: TGTGTGGAGCACTTGTAGTCAGCCCATTTGTGCAAA...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGAGGAAACAGATGCCTCTaGCATCATCTCCCATTTGCT +
Preference number: 4 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGGNRCL*HHLPFA
Trigger: AGCAAATGGGAGATGATGTCAGAGGCATCTGTTTCC...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAAGGGGGAACCACAGTTTaGAACATCAGGAAGAAGACT +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQGGTTV*NIRKKT
Trigger: AGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCC...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTTGGCCATGGGACTATTaGCATGATGATCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVWPWDY*HDDQTK
Trigger: TTTGGTTTGATCATCATGGCAATAGTCCCATGGCCA...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGCCCCTATTGGGTTCATaGAGATGGATGTTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWPLLGS*RWMFCK
Trigger: TTTGCAAAACATCCATCTGCATGAACCCAATAGGGG...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAACAGGGCTTATTACACTaGCTTGAGGGTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQQGLLH*LEGDGA
Trigger: TGCTCCATCACCCTCAAGCCAGTGTAATAAGCCCTG...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGGCTGTGAAATCCAGCTaGCATTCAGTACATTTTAAG +
Preference number: 4 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWAVKSS*HSVHFK
Trigger: CTTAAAATGTACTGAATGTCAGCTGGATTTCACAGC...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGCAGGTGGCTGTGGTGTaGGCTGGGGATCATACCAGA +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKQVAVV*AGDHTR
Trigger: TCTGGTATGATCCCCAGCTCACACCACAGCCACCTG...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTACAAGCATCTACAAATaGGTCGATTTCCAACTCAGT +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVTSIYK*VDFQLS
Trigger: ACTGAGTTGGAAATCGACTCATTTGTAGATGCTTGT...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTCCCCTGACCCCATaGTATAACTTCATCTACCAC +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQSPLTP*YNFIYH
Trigger: GTGGTAGATGAAGTTATATCATGGGGTCAGGGGAGA...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGAGAGTTCCAGAAAACTaGTCTGCACGGCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKRVPEN*SARRAR
Trigger: CCTGGCCCGCCGTGCAGAGCAGTTTTCTGGAACTCT...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTCAGCATAACTGTCACTaGACTTCTGATAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVQHNCH*TSDSSK
Trigger: TTTAGAGCTATCAGAAGTGCAGTGACAGTTATGCTG...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCCTGGACTAAAGACTaGAACCAGCCTCGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQSWTKD*NQPRSK
Trigger: TTTACTCCGAGGCTGGTTGCAGTCTTTAGTCCAGGA...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGCGCATCTCCACTCACTaGAAGCTCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKRISTH*KLCLPG
Trigger: ACCTGGGAGGCAGAGCTTGCAGTGAGTGGAGATGCG...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAATCAGGCACCATCACATaGATACATACCCAATGGATG +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQSGTIT*IHTQWM
Trigger: CATCCATTGGGTATGTATGCATGTGATGGTGCCTGA...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTACCAAAAGTAAGTGGTaGAGGAGGTTCTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVTKSKW*RRFFFE
Trigger: TTCAAAGAAGAACCTCCTCCACCACTTACTTTTGGT...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAACTGACATTCTTCGAGTaGGTGGACTCAGTTGTCATT +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQLTFFE*VDSVVI
Trigger: AATGACAACTGAGTCCACTCACTCGAAGAATGTCAG...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGCGAATCCCAGATAATTaGATCTTGTCTTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWRIPDN*ILSSGY
Trigger: ATAACCTGAAGACAAGATTCAATTATCTGGGATTCG...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTATCATCTGTGAAAACTaGCCATTCGGAATAATTGCT +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVIICEN*PFGIIA
Trigger: AGCAATTATTCCGAATGGGCAGTTTTCACAGATGAT...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTACATCATCTCCCATTTaGTTTCAACTTTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVTSSPI*FQLLQT
Trigger: TGTCTGCAAAAGTTGAAAGCAAATGGGAGATGATGT...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTGTTGCTGAACAATTATaGCAACCAAAAGTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVVAEQL*QPKVSG
Trigger: ACCACTTACTTTTGGTTGGCATAATTGTTCAGCAAC...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAGTATATCTCTGTCCCTaGCACAGTTTTGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQVYLCP*HSFASS
Trigger: ACTGGAAGCAAAACTGTGCCAGGGACAGAGATATAC...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTAAATTTCATTCCACTTaGCAGCAAAATCAGCATGCT +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVKFHST*QQNQHA
Trigger: AGCATGCTGATTTTGCTGCCAAGTGGAATGAAATTT...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAATACCCACAGTTCTTTaGAAGCCAGGTAAAAGGGTG +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQIPTVL*KPGKRV
Trigger: CACCCTTTTACCTGGCTTCCAAAGAACTGTGGGTAT...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAACCCACACATCCATCATaGCACCATTATACCTATTCA +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQPTHPS*HHYTYS
Trigger: TGAATAGGTATAATGGTGCCATGATGGATGTGTGGG...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAACCAGTTTACCCCTATTaGGTTCATGCAGATGGATGT +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQPVYPY*VHADGC
Trigger: ACATCCATCTGCATGAACCCAATAGGGGTAAACTGG...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTTTGACTTCTTTGTTCTaGCAAAGACTCTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVLTSLF*QRLSPF
Trigger: AAAAGGAGAGAGTCTTTGCCAGAACAAAGAAGTCAA...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAACCAACCAAAAGTAAGTaGTGGAGGAGGTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQPTKSK*WRRFFF
Trigger: AAAGAAGAACCTCCTCCACCACTTACTTTTGGTTGG...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
3UTR CAA 72 bp TGCCAACCAAAAGTAAGTGGTGGAGGAGGTTCTTCTTaGAATACATTTGCAGAGGGCAATGTAGCAAGACCT +
Preference number: 4 (lower is better)
Translates to: CQPKVSGGGGSS*NTFAEGNVARP
Trigger: AGGTCTTGCTACATTGCCCTCTGCAAATGTATTCAAAGAAGAACCTCCTCCACCACTTACTTTTGGTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.8
ENST00000572659.1
CDS-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAAAGATGATGAAGTACTaGCATTCTTCGAGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQKMMKY*HSSSEW
Trigger: CCACTCACTCGAAGAATGTCAGTACTTCATCATCTT...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAAAATGGCGTAGCATTTTaGTTTCAGAGCCTACCAAAA +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQNGVAF*FQSLPK
Trigger: TTTTGGTAGGCTCTGAAATCAAAATGCTACGCCATT...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAACAGAGGGACAATCATaGGAGATATGGGAAGGAATA +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQTEGQS*EIWEGI
Trigger: TATTCCTTCCCATATCTCTCATGATTGTCCCTCTGT...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAAAGACTTTTGTCTCATTaGTTGGATTTCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQRLLSH*LDFSSI
Trigger: GATGCTGGAGAAATCCAAGCAATGAGACAAAAGTCT...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGGATTATTTCCCCAGCTaGATCACCAACCTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKDYFPS*ITNLLA
Trigger: GGCGAGGAGGTTGGTGATGCAGCTGGGGAAATAATC...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTAAACATTTTGTAATGTaGATCCCACACATCCATCAT +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVKHFVM*IPHIHH
Trigger: ATGATGGATGTGTGGGATGCACATTACAAAATGTTT...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAATTAAATTCAGCAGCTTaGTCTGCTTCCTGTATACTG +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQLNSAA*SASCIL
Trigger: CAGTATACAGGAAGCAGAGCAAGCTGCTGAATTTAA...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTTTTGTATACCAAGAATaGCAAAGATACTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVFVYQE*QRYLVM
Trigger: CATCACCAAGTATCTTTGGCATTCTTGGTATACAAA...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAAAAACCTGTTAAGGAATaGCCAATTGGAACCTCATCT +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQKPVKE*PIGTSS
Trigger: AGATGAGGTTCCAATTGGCCATTCCTTAACAGGTTT...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGATGTAATTTTGTGTCCTaGACTAAAGACTGCAACCAG +
Preference number: 4 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGCNFVS*TKDCNQ
Trigger: CTGGTTGCAGTCTTTAGTCCAGGACACAAAATTACA...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTTTGGGTTCATGCAGATaGATGTTTTGCAAATGTAAT +
Preference number: 4 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVLGSCR*MFCKCN
Trigger: ATTACATTTGCAAAACATCCATCTGCATGAACCCAA...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAAAAAAGACACTGCAGTaGCACTACTTTGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQKKTLQ*HYFESQ
Trigger: CTGTGACTCAAAGTAGTGCCACTGCAGTGTCTTTTT...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAAAACTTTTGCAGACACTaGCAGTCTGTAAACTCATTC +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQNFCRH*QSVNSF
Trigger: GAATGAGTTTACAGACTGCCAGTGTCTGCAAAAGTT...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAGATCTATATCATCTGTaGAAACTGCCCATTCGGAAT +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQDLYHL*KLPIRN
Trigger: ATTCCGAATGGGCAGTTTTCACAGATGATATAGATC...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTTGCCTCTCAATATaGTCAACAACTAGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQSCLSI*STTSRV
Trigger: AACTCTGCTAGTTGTTGATCATATTGAGAGGCAAGA...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAATATGAAAGAAGGCACTaGCAGAATTTATTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQYERRH*QNLLGN
Trigger: ATTCCCCAATAAATTCTGTCAGTGCCTTCTTTCATA...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGATACAGAAATCGTTGCTaGACAATTATGCCAACCAAA +
Preference number: 4 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGYRNRC*TIMPTK
Trigger: TTTGGTTGGCATAATTGTTCAGCAACGATTTCTGTA...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATTACTATTGCTTGAGTaGCCAAACCAAATCGGGTTA +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQLLLLE*PNQIGL
Trigger: TAACCCGATTTGGTTTGGGCACTCAAGCAATAGTAA...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATACAGGCTTTACTATTaGTTGAGTGCCCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQYRLYY*LSAQTK
Trigger: TTTGGTTTGGGCACTCAAGCAATAGTAAAGCCTGTA...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAACTCACTGCAAGCTCTaGCTCCCAGGTTCATGCCAT +
Preference number: 4 (lower is better)
Translates to: YVFIQYIVITPLAYNGVATHCKL*LPGSCH
Trigger: ATGGCATGAACCTGGGAGGCAGAGCTTGCAGTGAGT...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGATTCTTTGAATACATTTaGAGAGGGCAATGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGFFEYI*RGQCSK
Trigger: CTTGCTACATTGCCCTCTGCAAATGTATTCAAAGAA...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGAGGAGACATTGATATATaGCCCATAAAAGACATATGC +
Preference number: 4 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGGDIDI*PIKDIC
Trigger: GCATATGTCTTTTATGGGCCATATATCAATGTCTCC...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTACTTGATCAGCCACACTaGCAAAGCCACCGAATCCCA +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVLDQPH*QSHRIP
Trigger: TGGGATTCGGTGGCTTTGCCAGTGTGGCTGATCAAG...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAAGTGGCAAACAATATTTaGTTTAAACTAGCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQVANNI*FKLAGD
Trigger: GTCTCCTGCTAGTTTAAACCAAATATTGTTTGCCAC...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTATTTGCTAGCCACAAGTaGGACAAGAGGGACACTGCA +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVFASHK*DKRDTA
Trigger: TGCAGTGTCCCTCTTGTCTCACTTGTGGCTAGCAAA...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGATTGCCATGTGGGGGTaGAAGCTGGGATACATTGTA +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKIAMWG*KLGYIV
Trigger: TACAATGTATCCCAGCTTTCACCCCCACATGGCAAT...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAGATAAAACTGGTTTATaGTCTTCAGTCTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQDKTGL*SSVCFQ
Trigger: CTGGAAACAGACTGAAGATCATAAACCAGTTTTATC...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGAACGAAAATGCCCACTaGGGATATCTGACACCTTCC +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKNENAH*GYLTPS
Trigger: GGAAGGTGTCAGATATCCGCAGTGGGCATTTTCGTT...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGACTGAGCACAGGACGTaGACTTGGATAGTAAACCAG +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKTEHRT*TWIVNQ
Trigger: CTGGTTTACTATCCAAGTGCACGTCCTGTGCTCAGT...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATTGTTGATATTAAAATaGCGCTGGGCCAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQLLILK*RWARKT
Trigger: TGTTTTTCTGGCCCAGCGCCATTTTAATATCAACAA...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAAATCAATCCAGGAATATaGCTGAAAATGAACTATGTC +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQINPGI*LKMNYV
Trigger: GACATAGTTCATTTTCAGCCATATTCCTGGATTGAT...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAAACAACTAGCAGAGTTTaGGAATTTAAGAGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: VLESLGEPQFETSGRRLQTTSRV*EFKRSK
Trigger: TTTGCTTCTCTTAAATTCCCAAACTCTGCTAGTTGT...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTATTACAGAACAATCTGTaGGTGGACGCTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVLQNNL*VDAFSS
Trigger: GCTGGAGAAAGCGTCCACTCACAGATTGTTCTGTAA...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGGAGGAGGTTCTTCTTTaGATACATTTGCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKEEVLL*IHLQRA
Trigger: TGCCCTCTGCAAATGTATTCAAAGAAGAACCTCCTC...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCATTCAGCAGCTTGCTCTaGTTCCTGTATACTGGCCAT +
Preference number: 4 (lower is better)
Translates to: YVFIQYIVITPLAYNGVAFSSLL*FLYTGH
Trigger: ATGGCCAGTATACAGGAAGCAGAGCAAGCTGCTGAA...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTACCCATGAGCGGACCTTaGAATACTCGTACATTTCCT +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVPMSGP*NTRTFP
Trigger: AGGAAATGTACGAGTATTCCAAGGTCCGCTCATGGG...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTAAGAGTACTCCACCTTTaGGCAGTTGAAGGAACCATC +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVRVLHL*AVEGTI
Trigger: GATGGTTCCTTCAACTGCCCAAAGGTGGAGTACTCT...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTATGGATGCTCATGTCCTaGGTTAAAACTTCTCCACCC +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVWMLMS*VKTSPP
Trigger: GGGTGGAGAAGTTTTAACCCAGGACATGAGCATCCA...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTAAAAATGAGCCAAGCATaGTGGCGTGCACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVKMSQA*WRAPVI
Trigger: GATTACAGGTGCACGCCACCATGCTTGGCTCATTTT...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAAGTGCAAATTTCTGCTaGCCTGCAGCATTTAGTCCA +
Preference number: 4 (lower is better)
Translates to: YVFIQYIVITPLAYNGVASANFC*PAAFSP
Trigger: TGGACTAAATGCTGCAGGTCAGCAGAAATTTGCACT...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTATTTTGTAGTCCATCTTaGAAGCAAGAGATGCGTGGG +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVFCSPS*KQEMRG
Trigger: CCCACGCATCTCTTGCTTTCAAGATGGACTACAAAA...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGGCCAAAGATACTTGGTaGTGTACAGAAATCGTTGCT +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKAKDTW*CTEIVA
Trigger: AGCAACGATTTCTGTACATCACCAAGTATCTTTGGC...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTACATCTGGCCTTCTCCTaGCAACAGGTACATTTCTTT +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVHLAFS*QQVHFF
Trigger: AAAGAAATGTACCTGTTGGCAGGAGAAGGCCAGATG...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAAAGACACAAAGGTGTTaGTCTGTGTGTTTGGCAACC +
Preference number: 4 (lower is better)
Translates to: YVFIQYIVITPLAYNGVAKTQRC*SVCLAT
Trigger: GGTTGCCAAACACACAGACCAACACCTTTGTGTCTT...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTATCCATTTTGCACAAATaGGCTGACTACAAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVSILHK*ADYKCS
Trigger: GGAGCACTTGTAGTCAGCCCATTTGTGCAAAATGGA...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAAGAACAATCTGTGAGTaGACGCTTTCTCCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: YVFIQYIVITPLAYNGVARTICE*TLSPAN
Trigger: GTTTGCTGGAGAAAGCGTCCACTCACAGATTGTTCT...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGAAATCTGATATGCTGTaGAATCCAGCTGACATTCAG +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKKSDML*NPADIQ
Trigger: CTGAATGTCAGCTGGATTTCACAGCATATCAGATTT...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGCATACATGTCAGATATaGTGCTCAATGTGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKHTCQI*CSMCFP
Trigger: TGGGAAACACATTGAGCATCATATCTGACATGTATG...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAACATTGTCTTTTCCATaGCATCCACTACAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: YVFIQYIVITPLAYNGVATLSFP*HPLQPV
Trigger: AACAGGCTGTAGTGGATGTCATGGAAAAGACAATGT...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGCATATGCAATTCTTGTaGTTGTGGGTTCCATCTGAA +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKHMQFL*LWVPSE
Trigger: TTCAGATGGAACCCACAATCACAAGAATTGCATATG...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCATGCAGCTGGAGACATTaGTATATGGCCCATAAAAGA +
Preference number: 4 (lower is better)
Translates to: YVFIQYIVITPLAYNGVACSWRH*YMAHKR
Trigger: TCTTTTATGGGCCATATATCAATGTCTCCAGCTGCA...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTAAAGGCGCCTTTCATTTaGCTTCTTTGTTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVKAPFI*LLCSGK
Trigger: TTTGCCAGAACAAAGAAGTCAAATGAAAGGCGCCTT...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGGCGATTAGTAACTACTaGTTGTTTTGCTTGACAGTG +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKAISNY*LFCLTV
Trigger: CACTGTCAAGCAAAACAATCAGTAGTTACTAATCGC...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGTTAGCTTCTTTCTCCTaGGCAGATTTTCCTATTTCC +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKLASFS*ADFPIS
Trigger: GGAAATAGGAAAATCTGCTCAGGAGAAAGAAGCTAA...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTATGTCCTTGTCCATTTTaGACAAATGGGCTGACTACA +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVCPCPF*TNGLTT
Trigger: TGTAGTCAGCCCATTTGTGCAAAATGGACAAGGACA...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGATCATATTAGTGGCTTaGTGGTTATGGAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKIILVA*WLWRSC
Trigger: ACAGCTTCTCCATAACCACCAAGCCACTAATATGAT...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGACTGACAGAATTTATTaGGGAATCTTCTTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKTDRIY*GIFLPL
Trigger: GAGAGGCAAGAAGATTCCCCAATAAATTCTGTCAGT...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAAAAGCAAGAGATGCGTaGGTAAAGCAGCAATTGCAA +
Preference number: 4 (lower is better)
Translates to: YVFIQYIVITPLAYNGVAKARDA*VKQQLQ
Trigger: TTGCAATTGCTGCTTTACCCACGCATCTCTTGCTTT...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTATGCTTTCTAATTTGCTaGGCTAACCAATTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVCFLIC*ANQFPA
Trigger: AGCTGGAAATTGGTTAGCTCAGCAAATTAGAAAGCA...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGACTGTAAATCTGATATaGTGTGAAATCCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKTVNLI*CEIQLT
Trigger: TGTCAGCTGGATTTCACAGCATATCAGATTTACAGT...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTAAAGATGCAAATGGCTTaGACGAGACTTTTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVKMQMA*TRLLSH
Trigger: ATGAGACAAAAGTCTCGTGCAAGCCATTTGCATCTT...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGCCCATAAAAGACATATaGAATTCTTGTGATTGTGGG +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKPIKDI*NSCDCG
Trigger: CCCACAATCACAAGAATTGCATATGTCTTTTATGGG...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGAGTTTAAAAAGACACTaGAGTGGCACTACTTTGAGT +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKSLKRH*SGTTLS
Trigger: ACTCAAAGTAGTGCCACTGCAGTGTCTTTTTAAACT...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCATTCTGCTTTCTTGCTTaGTACCTGCATGCAATTGTA +
Preference number: 4 (lower is better)
Translates to: YVFIQYIVITPLAYNGVAFCFLA*YLHAIV
Trigger: TACAATTGCATGCAGGTAGCAAGCAAGAAAGCAGAA...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCACTTTTCTTCAGCTTTTaGTTGGGTCTGAAATCTTGC +
Preference number: 4 (lower is better)
Translates to: YVFIQYIVITPLAYNGVALFFSF*LGLKSC
Trigger: GCAAGATTTCAGACCCAACCAAAAGCTGAAGAAAAG...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTAATATTAGTGGCTTGGTaGTTATGGAGAAGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVILVAW*LWRSCL
Trigger: CAAACAGCTTCTCCATAACCACCAAGCCACTAATAT...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGTTCATTGCAAAATATTaGGCCAGTTTACCCCTATTG +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKFIAKY*ASLPLL
Trigger: CAATAGGGGTAAACTGGCCCAATATTTTGCAATGAA...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAAGGTATCCTTACCTTTaGAAGTGGTGTTATACTGCA +
Preference number: 4 (lower is better)
Translates to: YVFIQYIVITPLAYNGVARYPYL*KWCYTA
Trigger: TGCAGTATAACACCACTTCCAAAGGTAAGGATACCT...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTACTCATCAGCCTATTATaGCAAAGAGAAATCATGTTC +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVLISLL*QREIMF
Trigger: GAACATGATTTCTCTTTGTCATAATAGGCTGATGAG...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR TCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTAATTAGTATTAGTTGGTaGTATTTCCCCTTCATAGGG +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVISISW*YFPFIG
Trigger: CCCTATGAAGGGGAAATATCACCAACTAATACTAAT...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR GCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAATCAAGTCTCCACACTaGCTTATGTTTTCATCCAAT +
Preference number: 4 (lower is better)
Translates to: YVFIQYIVITPLAYNGVAIKSPH*LMFSSN
Trigger: ATTGGATGAAAACATAAGGCAGTGTGGAGACTTGAT...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCACTAAAAAGATGCAAATaGCTTGCACGAGACTTTTGT +
Preference number: 4 (lower is better)
Translates to: YVFIQYIVITPLAYNGVALKRCK*LARDFC
Trigger: ACAAAAGTCTCGTGCAAGCCATTTGCATCTTTTTAG...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTAAAAAGTCAAAGGCAGTaGCAAAACCTGTTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LPNNGNSVINHVACNIHVKSQRQ*QNLLRN
Trigger: ATTCCTTAACAGGTTTTGCCACTGCCTTTGACTTTT...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CCA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGCAAGTTAGGTTTAGCTaGAATCTAACATATACAGAG +
Preference number: 4 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKQVRFS*NLTYTE
Trigger: CTCTGTATATGTTAGATTCCAGCTAAACCTAACTTG...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS GCA 90 bp GGCTCCGCAAGACCCCCGCGTCGTCTCCCGCGCTACGGCAGGCGCTaGCCCAGCTCGGTCTCCTCAGCCGCGCTCGGTCCCCGCGACCCG +
Preference number: 5 (lower is better)
Translates to: GSARPPRRLPRYGRR*PSSVSSAALGPRDP
Trigger: CGGGTCGCGGGGACCGAGCGCGGCTGAGGAGACCGAGCTGGGGCAGCGCCTGCCGTAGCGCGGGAGACGACGCGGGGGTCTTGCGGAGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 90 bp CCCGCGTGCCCAGGCGGTGATGTCGCCGCGGCCGAGGATCCTCTGTaGCAGCTCCGGCCGCGCAGCCCGGGGAGGGTGAGACGGCGACGC +
Preference number: 5 (lower is better)
Translates to: PACPGGDVAAAEDPL*QLRPRSPGRVRRRR
Trigger: GCGTCGCCGTCTCACCCTCCCCGGGCTGCGCGGCCGGAGCTGGCACAGAGGATCCTCGGCCGCGGCGACATCACCGCCTGGGCACGCGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS CCA 90 bp CGCACGGCCCGGACACGCCCGCCCTCAGGAAACGCCGGACGCTTGTaGGGGCAACCACGGACCGCAGGACAGAGACCCGCGGGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: RTARTRPPSGNAGRL*GQPRTAGQRPAGGG
Trigger: CCCGCCGCCCGCGGGTCTCTGTCCTGCGGTCCGTGGTTGCCCCCACAAGCGTCCGGCGTTTCCTGAGGGCGGGCGTGTCCGGGCCGTGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 90 bp GCGGCGGGTTCTCTCGGTGGCGCCGTATCCAGAGCAGCGCCCGCGTaGCCAGGCGGTGATGTCGCCGCGGCCGAGGATCCTCTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: AAGSLGGAVSRAAPA*PGGDVAAAEDPLCQ
Trigger: CTGGCACAGAGGATCCTCGGCCGCGGCGACATCACCGCCTGGGCACGCGGGCGCTGCTCTGGATACGGCGCCACCGAGAGAACCCGCCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS TCA 90 bp ACCTCCTCGCCAGTCCACTTAAGCCACTGCGCACATTCTCCCAGTTaGCCTTCCCAGGGCTTATTACACTGGCTTGAGGGTGATGGAGCA +
Preference number: 5 (lower is better)
Translates to: TSSPVHLSHCAHSPS*PSQGLLHWLEGDGA
Trigger: TGCTCCATCACCCTCAAGCCAGTGTAATAAGCCCTGGGAAGGTCAACTGGGAGAATGTGCGCAGTGGCTTAAGTGGACTGGCGAGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS TCA 90 bp GGTGGCTGTGGTGTGAGCTGGGGATCATACCAGATGTATTCAGTGTaGAGAGTACTCCACCTTTGGGCAGTTGAAGGAACCATCGGTCCA +
Preference number: 5 (lower is better)
Translates to: GGCGVSWGSYQMYSV*RVLHLWAVEGTIGP
Trigger: TGGACCGATGGTTCCTTCAACTGCCCAAAGGTGGAGTACTCTTCACACTGAATACATCTGGTATGATCCCCAGCTCACACCACAGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS-3UTR CAA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTGAATGTCAGGTACCCTaGCCAGGTGTGGTGGCTCAT +
Preference number: 5 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVECQVP*PGVVAH
Trigger: ATGAGCCACCACACCTGGCAAGGGTACCTGACATTC...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS GCA 90 bp AAATACCATTTCCCCATGTTGAGAGGCAGTGATTATTTCCCCAGCTaGATCACCAACCTCCTCGCCAGTCCACTTAAGCCACTGCGCACA +
Preference number: 5 (lower is better)
Translates to: KYHFPMLRGSDYFPS*ITNLLASPLKPLRT
Trigger: TGTGCGCAGTGGCTTAAGTGGACTGGCGAGGAGGTTGGTGATGCAGCTGGGGAAATAATCACTGCCTCTCAACATGGGGAAATGGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 90 bp CCAGTCACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTaGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAA +
Preference number: 5 (lower is better)
Translates to: PVTKAPVSNAIILVA*WLWRSCLPHERTLE
Trigger: TTCCAAGGTCCGCTCATGGGGCAAACAGCTTCTCCATAACCACCAAGCCACTAATATGATAGCATTACTCACAGGGGCCTTGGTGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 90 bp GTCACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTaGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATAC +
Preference number: 5 (lower is better)
Translates to: VTKAPVSNAIILVAW*LWRSCLPHERTLEY
Trigger: GTATTCCAAGGTCCGCTCATGGGGCAAACAGCTTCTCCATAACCACCAAGCCACTAATATGATAGCATTACTCACAGGGGCCTTGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS-3UTR CAA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGGCCAGTTTACCCCTATaGGGTTCATGCAGATGGATG +
Preference number: 5 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWASLPL*GSCRWM
Trigger: CATCCATCTGCATGAACCCAATAGGGGTAAACTGGC...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS GCA 90 bp GAACCAGGAAGTGAGGTAATGACAACATCAGGAAGATCCATGTGGTaGCCTTCAGAAGACAAAGACTTCTTGCTTCCCTCAGCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: EPGSEVMTTSGRSMW*PSEDKDFLLPSASV
Trigger: GACAGAGGCTGAGGGAAGCAAGAAGTCTTTGTCTTCTGAAGGGCACCACATGGATCTTCCTGATGTTGTCATTACCTCACTTCCTGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 90 bp GTGTCCTGGACTAAAGACTGCAACCAGCCTCGGAGTAAACGAAAATaGCCACTGCGGATATCTGACACCTTCCATTCACAAGCATCTACA +
Preference number: 5 (lower is better)
Translates to: VSWTKDCNQPRSKRK*PLRISDTFHSQAST
Trigger: TGTAGATGCTTGTGAATGGAAGGTGTCAGATATCCGCAGTGGGCATTTTCGTTTACTCCGAGGCTGGTTGCAGTCTTTAGTCCAGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 90 bp AAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTGGTTATaGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATACTCGTAC +
Preference number: 5 (lower is better)
Translates to: KAPVSNAIILVAWWL*RSCLPHERTLEYSY
Trigger: GTACGAGTATTCCAAGGTCCGCTCATGGGGCAAACAGCTTCTCCATAACCACCAAGCCACTAATATGATAGCATTACTCACAGGGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 90 bp CCTGAACCAGGAAGTGAGGTAATGACAACATCAGGAAGATCCATGTaGTGCCCTTCAGAAGACAAAGACTTCTTGCTTCCCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: PEPGSEVMTTSGRSM*CPSEDKDFLLPSAS
Trigger: AGAGGCTGAGGGAAGCAAGAAGTCTTTGTCTTCTGAAGGGCACCACATGGATCTTCCTGATGTTGTCATTACCTCACTTCCTGGTTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS-3UTR CAA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTAGGAAACGCCGGACGCTaGTGGGGGCAACCACGGACC +
Preference number: 5 (lower is better)
Translates to: LPNNGNSVINHVACNIHVGNAGR*WGQPRT
Trigger: GGTCCGTGGTTGCCCCCACAAGCGTCCGGCGTTTCC...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTTTAAGGAATGGCCAATaGGAACCTCATCTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVLRNGQ*EPHLLV
Trigger: CACCAGGAGATGAGGTTCCAATTGGCCATTCCTTAA...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAATCCACCTTTGGGCAGTaGAAGGAACCATCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: VLESLGEPQFETSGRRLQSTFGQ*KEPSVH
Trigger: ATGGACCGATGGTTCCTTCAACTGCCCAAAGGTGGA...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAAGCACAGGACGTGCACTaGGATAGTAAACCAGGTGTC +
Preference number: 5 (lower is better)
Translates to: VLESLGEPQFETSGRRLQAQDVH*DSKPGV
Trigger: GACACCTGGTTTACTATCCAAGTGCACGTCCTGTGC...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGCAAGTGTTAGAGAGCTaGGGGGAACCACAGTTTGAA +
Preference number: 5 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWQVLES*GEPQFE
Trigger: TTCAAACTGTGGTTCCCCCAAGCTCTCTAACACTTG...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGGCTTGCACGAGACTTTaGTCTCATTGCTTGGATTTC +
Preference number: 5 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWACTRL*SHCLDF
Trigger: GAAATCCAAGCAATGAGACAAAAGTCTCGTGCAAGC...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAACCCCATGAGCGGACCTaGGAATACTCGTACATTTCC +
Preference number: 5 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQPHERT*EYSYIS
Trigger: GGAAATGTACGAGTATTCCAAGGTCCGCTCATGGGG...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATTATGGAGAAGCTGTTaGCCCCATGAGCGGACCTTG +
Preference number: 5 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQLWRSC*PHERTL
Trigger: CAAGGTCCGCTCATGGGGCAAACAGCTTCTCCATAA...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAACGCACATTCTCCCAGTaGACCTTCCCAGGGCTTATT +
Preference number: 5 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQRTFSQ*TFPGLI
Trigger: AATAAGCCCTGGGAAGGTCAACTGGGAGAATGTGCG...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGATCGGGTTATTTGGCCTaGATCAGCCACACTGGCAAA +
Preference number: 5 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGSGYLA*ISHTGK
Trigger: TTTGCCAGTGTGGCTGATCAAGGCCAAATAACCCGA...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGAGAAGACAAAGACTTCTaGCTTCCCTCAGCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGEDKDF*LPSASV
Trigger: GACAGAGGCTGAGGGAAGCAAGAAGTCTTTGTCTTC...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAAAGGCTGCTGCTGTATTaGCTAGCCACAAGTGAGACA +
Preference number: 5 (lower is better)
Translates to: VLESLGEPQFETSGRRLQRLLLY*LATSET
Trigger: TGTCTCACTTGTGGCTAGCAAATACAGCAGCAGCCT...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTCCCTTGCCACCCAGATaGTTCAAAGACTTATTCCTT +
Preference number: 5 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVPLPPR*FKDLFL
Trigger: AAGGAATAAGTCTTTGAACAATCTGGGTGGCAAGGG...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTATAATCTACCAGCCCTaGCCACCCAGATTGTTCAAA +
Preference number: 5 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVIIYQP*PPRLFK
Trigger: TTTGAACAATCTGGGTGGCAAGGGCTGGTAGATTAT...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS GCA 90 bp GGACTAAAGACTGCAACCAGCCTCGGAGTAAACGAAAATGCCCACTaGGGATATCTGACACCTTCCATTCACAAGCATCTACAAATGAGT +
Preference number: 5 (lower is better)
Translates to: GLKTATSLGVNENAH*GYLTPSIHKHLQMS
Trigger: ACTCATTTGTAGATGCTTGTGAATGGAAGGTGTCAGATATCCGCAGTGGGCATTTTCGTTTACTCCGAGGCTGGTTGCAGTCTTTAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 90 bp CCAGTTAGGGAATGTGTGTATTTTTGCAGTACCATAATCAGCAGGTaGCTGTGGTGTGAGCTGGGGATCATACCAGATGTATTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: PVRECVYFCSTIISR*LWCELGIIPDVFSV
Trigger: CACACTGAATACATCTGGTATGATCCCCAGCTCACACCACAGCCACCTGCTGATTATGGTACTGCAAAAATACACACATTCCCTAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS-3UTR CAA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGTTCTTCAGCTTTTGGTaGGGTCTGAAATCTTGCACT +
Preference number: 5 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWFFSFW*GLKSCT
Trigger: AGTGCAAGATTTCAGACCCAACCAAAAGCTGAAGAA...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGAAAGATGCAAATGGCTaGCACGAGACTTTTGTCTCA +
Preference number: 5 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWKDANG*HETFVS
Trigger: TGAGACAAAAGTCTCGTGCAAGCCATTTGCATCTTT...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGGCAAACACCAATACATaGTTAAGGTGGCTCAACTTG +
Preference number: 5 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWANTNT*LRWLNL
Trigger: CAAGTTGAGCCACCTTAACAATGTATTGGTGTTTGC...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGTACCATTTCCCCATGTaGAGAGGCAGTGATTATTTC +
Preference number: 5 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWYHFPM*RGSDYF
Trigger: GAAATAATCACTGCCTCTCAACATGGGGAAATGGTA...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTAAAGGCGCCTTTCATTaGACTTCTTTGTTCTGGCAA +
Preference number: 5 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVKGAFH*TSLFWQ
Trigger: TTGCCAGAACAAAGAAGTCAAATGAAAGGCGCCTTT...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTTGCAGTGGCACTACTTaGAGTCACAGAGTGTTAATT +
Preference number: 5 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVCSGTT*SHRVLI
Trigger: AATTAACACTCTGTGACTCAAAGTAGTGCCACTGCA...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS TCA 90 bp ATGTGTGTATTTTTGCAGTACCATAATCAGCAGGTGGCTGTGGTGTaGGCTGGGGATCATACCAGATGTATTCAGTGTGAAGAGTACTCC +
Preference number: 5 (lower is better)
Translates to: MCVFLQYHNQQVAVV*AGDHTRCIQCEEYS
Trigger: GGAGTACTCTTCACACTGAATACATCTGGTATGATCCCCAGCTCACACCACAGCCACCTGCTGATTATGGTACTGCAAAAATACACACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 90 bp AGGGAATGTGTGTATTTTTGCAGTACCATAATCAGCAGGTGGCTGTaGTGTGAGCTGGGGATCATACCAGATGTATTCAGTGTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: RECVYFCSTIISRWL*CELGIIPDVFSVKS
Trigger: ACTCTTCACACTGAATACATCTGGTATGATCCCCAGCTCACACCACAGCCACCTGCTGATTATGGTACTGCAAAAATACACACATTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS-3UTR CAA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTACAAATACTTGTCCATaGGGGGCAAAAGTAAATGAG +
Preference number: 5 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVTNTCP*GAKVNE
Trigger: CTCATTTACTTTTGCCCCCAATGGACAAGTATTTGT...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAGCTTATTACACTGGCTaGAGGGTGATGGAGCAAACA +
Preference number: 5 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQAYYTG*RVMEQT
Trigger: TGTTTGCTCCATCACCCTCAAGCCAGTGTAATAAGC...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp AGCCACTGCACCCGGCCGCCAACAGGTACATTTCTGTATTGTCTGTACAATGTTTATTGGGGAATCTTCTaGCCTCTCAATATGATCAAC +
Preference number: 5 (lower is better)
Translates to: SHCTRPPTGTFLYCLYNVYWGIF*PLNMIN
Trigger: GTTGATCATATTGAGAGGCAAGAAGATTCCCCAATA...AACATTGTACAGACAATACAGAAATGTACCTGTTGGCGGCCGGGTGCAGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAACCAAATCGGGTTATTaGGCCTTGATCAGCCACACT +
Preference number: 5 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQTKSGY*ALISHT
Trigger: AGTGTGGCTGATCAAGGCCAAATAACCCGATTTGGT...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGGAATGCCAAAGATACTaGGTGATGTACAGAAATCGT +
Preference number: 5 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWECQRY*VMYRNR
Trigger: ACGATTTCTGTACATCACCAAGTATCTTTGGCATTC...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS TCA 90 bp TATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATaGGCGGACCTTGGAATACTCGTACATTTCCTCAGTAATAACCCA +
Preference number: 5 (lower is better)
Translates to: YHISGLVVMEKLFAP*ADLGILVHFLSNNP
Trigger: TGGGTTATTACTGAGGAAATGTACGAGTATTCCAAGGTCCGCTCATGGGGCAAACAGCTTCTCCATAACCACCAAGCCACTAATATGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS TCA 90 bp ATACCAGATGTATTCAGTGTGAAGAGTACTCCACCTTTGGGCAGTTaGAGGAACCATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTG +
Preference number: 5 (lower is better)
Translates to: IPDVFSVKSTPPLGS*RNHRSIFRSVLSNL
Trigger: CAAATTAGAAAGCACCGACCTAAAGATGGACCGATGGTTCCTTCAACTGCCCAAAGGTGGAGTACTCTTCACACTGAATACATCTGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS-3UTR CAA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGAAGAGAAAACTTAAATaGTATATCTCTGTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWKRKLK*YISVPG
Trigger: GCCAGGGACAGAGATATACAATTTAAGTTTTCTCTT...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp GTGTTAGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAAGAGACTTTTGTCTCATaGCTTGGATTTCTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: VLESLGEPQFETSGRRLQETFVS*LGFLQH
Trigger: ATGCTGGAGAAATCCAAGCAATGAGACAAAAGTCTC...TTGCAGTCTTCTTCCTGATGTTTCAAACTGTGGTTCCCCCAAGCTCTCTAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGAATTCAAAGGCAACTTaGTCTTCTGGGCATAACAAA +
Preference number: 5 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWNSKAT*SSGHNK
Trigger: TTTGTTATGCCCAGAAGACAAAGTTGCCTTTGAATT...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TCTGTTTCTAAGGCAGGGGTCTCAGGCACCATCACATGCATACATACCCAATGGTATCCACAAAGTGGGTaGGTAAGTATTATTAGTGCA +
Preference number: 5 (lower is better)
Translates to: SVSKAGVSGTITCIHTQWYPQSG*VSIISA
Trigger: TGCACTAATAATACTTACCAACCCACTTTGTGGATA...CCATTGGGTATGTATGCATGTGATGGTGCCTGAGACCCCTGCCTTAGAAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS GCA 90 bp CATTGTCTTTTCCATGACATCCACTACAGCCTGTTTCCATATATTTaGTTTAGATCCTTTATCTACTCCAGTCACCAAGGCCCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: HCLFHDIHYSLFPYI*FRSFIYSSHQGPCE
Trigger: CTCACAGGGGCCTTGGTGACTGGAGTAGATAAAGGATCTAAAGCAAATATATGGAAACAGGCTGTAGTGGATGTCATGGAAAAGACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 90 bp ATTCAGCAGCTTGCTCTGCTTCCTGTATACTGGCCATGGGACTATTaGCATGATGATCAAACCAAAACATTTTGTAATGTGCATCCCACA +
Preference number: 5 (lower is better)
Translates to: IQQLALLPVYWPWDY*HDDQTKTFCNVHPT
Trigger: TGTGGGATGCACATTACAAAATGTTTTGGTTTGATCATCATGGCAATAGTCCCATGGCCAGTATACAGGAAGCAGAGCAAGCTGCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS-3UTR CAA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAAGTGAGTGGACTCAGTaGTCATTCCTCTCAACTTTT +
Preference number: 5 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQSEWTQ*SFLSTF
Trigger: AAAAGTTGAGAGGAATGACAACTGAGTCCACTCACT...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATATCATATTAGTGGCTaGGTGGTTATGGAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQYHISG*VVMEKL
Trigger: CAGCTTCTCCATAACCACCAAGCCACTAATATGATA...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGACACTTTTCAGTCTCATaGCTGAAGAATAAGCAGACA +
Preference number: 5 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGHFSVS*LKNKQT
Trigger: TGTCTGCTTATTCTTCAGCAATGAGACTGAAAAGTG...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAACAAGACCTGGGAATTTaGATACAAGGAAGGATTGTC +
Preference number: 5 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQQDLGI*IQGRIV
Trigger: GACAATCCTTCCTTGTATCAAAATTCCCAGGTCTTG...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS TCA 90 bp GAAGGAACCATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTaGGCTAACCAATTTCCAGCTCCATTCTTTAAGATGAACTTATCC +
Preference number: 5 (lower is better)
Translates to: EGTIGPSLGRCFLIC*ANQFPAPFFKMNLS
Trigger: GGATAAGTTCATCTTAAAGAATGGAGCTGGAAATTGGTTAGCTCAGCAAATTAGAAAGCACCGACCTAAAGATGGACCGATGGTTCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 90 bp AGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATaGCTTGCACGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: SITVTALLIALKRCK*LARDFCLIAWISPA
Trigger: TGCTGGAGAAATCCAAGCAATGAGACAAAAGTCTCGTGCAAGCCATTTGCATCTTTTTAGAGCTATCAGAAGTGCAGTGACAGTTATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS-3UTR CAA 90 bp GTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAATCTGTGAGTGGAGTTGGGTCTGAAATCTaGCACTTTCTGTGTTTTAAA +
Preference number: 5 (lower is better)
Translates to: VSPAHPYITFLTEQSVSGVGSEI*HFLCFK
Trigger: TTTAAAACACAGAAAGTGCAAGATTTCAGACCCAAC...TCCACTCACAGATTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAACTTTTCTTCAGCTTTaGGTTGGGTCTGAAATCTTG +
Preference number: 5 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQTFLQL*VGSEIL
Trigger: CAAGATTTCAGACCCAACCAAAAGCTGAAGAAAAGT...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAGGAATGTGTGTATTTTaGCAGTACCATAATCAGCAG +
Preference number: 5 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQGMCVF*QYHNQQ
Trigger: CTGCTGATTATGGTACTGCAAAAATACACACATTCC...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACAGAACAAAAATGCCCCACAATATaGAGAGTTCAGCGATTAGTA +
Preference number: 5 (lower is better)
Translates to: YPMDVSPAHPYITFLTEQKCPTI*RVQRLV
Trigger: TACTAATCGCTGAACTCTCAATATTGTGGGGCATTT...TTGTTCTGTAAGGAATGTTATGTATGGGTGAGCGGGTGACACATCCATTGGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS GCA 90 bp AACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTaGACGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCATCAAA +
Preference number: 5 (lower is better)
Translates to: NCHCTSDSSKKMQMA*TRLLSHCLDFSSIK
Trigger: TTTGATGCTGGAGAAATCCAAGCAATGAGACAAAAGTCTCGTGCAAGCCATTTGCATCTTTTTAGAGCTATCAGAAGTGCAGTGACAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 90 bp TTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATaGAAATGGCTTGCACGAGACTTTTGTCTCATTGCTTGGATTTCT +
Preference number: 5 (lower is better)
Translates to: LDSITVTALLIALKR*KWLARDFCLIAWIS
Trigger: AGAAATCCAAGCAATGAGACAAAAGTCTCGTGCAAGCCATTTGCATCTTTTTAGAGCTATCAGAAGTGCAGTGACAGTTATGCTGTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS-3UTR CAA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGCAAAATCAGCATGCTTaGGTGGAGGTAGGTAGTATG +
Preference number: 5 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKQNQHA*VEVGSM
Trigger: CATACTACCTACCTCCACCAAAGCATGCTGATTTTG...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTACTGTCCTTGTCCATTTaGCACAAATGGGCTGACTAC +
Preference number: 5 (lower is better)
Translates to: LPNNGNSVINHVACNIHVLSLSI*HKWADY
Trigger: GTAGTCAGCCCATTTGTGCAAAATGGACAAGGACAG...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp CTGCCCAATAATGGAAATAGTGTTATCAACCATGTAGCATGCAATATTCATGTAAAATACAACTCTGCATaGCCATGTGGGGGTGAAAGC +
Preference number: 5 (lower is better)
Translates to: LPNNGNSVINHVACNIHVKYNSA*PCGGES
Trigger: GCTTTCACCCCCACATGGCAATGCAGAGTTGTATTT...TACATGAATATTGCATGCTACATGGTTGATAACACTATTTCCATTATTGGGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAGGAGGAGGTTCTTCTTaGAATACATTTGCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: YVFIQYIVITPLAYNGVAGGGSS*NTFAEG
Trigger: GCCCTCTGCAAATGTATTCAAAGAAGAACCTCCTCC...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS TCA 90 bp GTATGTTTGCCCAAAGAAGATGATGAAGTACTGACATTCTTCGAGTaGGTGGACTCAGTTGTCATTCCTCTCAACTTTTTATACTTCTTG +
Preference number: 5 (lower is better)
Translates to: VCLPKEDDEVLTFFE*VDSVVIPLNFLYFL
Trigger: CAAGAAGTATAAAAAGTTGAGAGGAATGACAACTGAGTCCACTCACTCGAAGAATGTCAGTACTTCATCATCTTCTTTGGGCAAACATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS TCA 90 bp AAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATaGTCAACAACTAGCAGAGTTTGGGAATTTAAGAGAAGCAAAGCA +
Preference number: 5 (lower is better)
Translates to: KALTEFIGESSCLSI*STTSRVWEFKRSKA
Trigger: TGCTTTGCTTCTCTTAAATTCCCAAACTCTGCTAGTTGTTGATCATATTGAGAGGCAAGAAGATTCCCCAATAAATTCTGTCAGTGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS-3UTR CAA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGGACATCATCTCCCATTaGCTTTCAACTTTTGCAGAC +
Preference number: 5 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKDIISH*LSTFAD
Trigger: GTCTGCAAAAGTTGAAAGCAAATGGGAGATGATGTC...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGTTTCTGCTTTCTTGCTaGCTACCTGCATGCAATTGT +
Preference number: 5 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKFLLSC*LPACNC
Trigger: ACAATTGCATGCAGGTAGCAAGCAAGAAAGCAGAAA...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAGTAGTTTCTGCTTTCTaGCTTGCTACCTGCATGCAA +
Preference number: 5 (lower is better)
Translates to: YVFIQYIVITPLAYNGVAVVSAF*LATCMQ
Trigger: TTGCATGCAGGTAGCAAGCAAGAAAGCAGAAACTAC...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAGCCTGTACCTTTCTTTaGCTATCAATGACGTGTTCC +
Preference number: 5 (lower is better)
Translates to: YVFIQYIVITPLAYNGVAACTFL*LSMTCS
Trigger: GGAACACGTCATTGATAGCAAAAGAAAGGTACAGGC...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS GCA 90 bp CATGGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAATGTaGATCCCACACATCCATCATGGCACCATTATACCTATTCATAAA +
Preference number: 5 (lower is better)
Translates to: HGTIAMMIKPKHFVM*IPHIHHGTIIPIHK
Trigger: TTTATGAATAGGTATAATGGTGCCATGATGGATGTGTGGGATGCACATTACAAAATGTTTTGGTTTGATCATCATGGCAATAGTCCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS-3UTR CAA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGTTCAGAAACAAATACTaGTCCATTGGGGGCAAAAGT +
Preference number: 5 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKFRNKY*SIGGKS
Trigger: ACTTTTGCCCCCAATGGACAAGTATTTGTTTCTGAA...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS GCA 90 bp AAATCTGCAGCTGGAGACATTGATATATGGCCCATAAAAGACATATaGAATTCTTGTGATTGTGGGTTCCATCTGAAAAGTAACATTAAC +
Preference number: 5 (lower is better)
Translates to: KSAAGDIDIWPIKDI*NSCDCGFHLKSNIN
Trigger: GTTAATGTTACTTTTCAGATGGAACCCACAATCACAAGAATTGCATATGTCTTTTATGGGCCATATATCAATGTCTCCAGCTGCAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS-3UTR CAA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCACTTTTGTCTCATTGCTaGGATTTCTCCAGCATCAAA +
Preference number: 5 (lower is better)
Translates to: YVFIQYIVITPLAYNGVALLSHC*DFSSIK
Trigger: TTTGATGCTGGAGAAATCCAAGCAATGAGACAAAAG...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp AAGGGATGCAAGATAAGTCAGGCAGTTTTCCAATTCTGTTTCCAGTTTAAAAAGTTTCATTTGACTTCTTaGTTCTGGCAAAGACTCTCT +
Preference number: 5 (lower is better)
Translates to: KGCKISQAVFQFCFQFKKFHLTS*FWQRLS
Trigger: AGAGAGTCTTTGCCAGAACAAAGAAGTCAAATGAAA...CTTTTTAAACTGGAAACAGAATTGGAAAACTGCCTGACTTATCTTGCATCCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAGATGTACAGAAATCGTaGCTGAACAATTATGCCAAC +
Preference number: 5 (lower is better)
Translates to: YVFIQYIVITPLAYNGVADVQKS*LNNYAN
Trigger: GTTGGCATAATTGTTCAGCAACGATTTCTGTACATC...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCATGCATTTGTGTATGTTaGCCCAAAGAAGATGATGAA +
Preference number: 5 (lower is better)
Translates to: YVFIQYIVITPLAYNGVACICVC*PKEDDE
Trigger: TTCATCATCTTCTTTGGGCAAACATACACAAATGCA...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCAATTCATTGCAAAATATaGGGCCAGTTTACCCCTATT +
Preference number: 5 (lower is better)
Translates to: YVFIQYIVITPLAYNGVAIHCKI*GQFTPI
Trigger: AATAGGGGTAAACTGGCCCAATATTTTGCAATGAAT...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS-3UTR CAA 90 bp TATGTTTTCATCCAATACATTGTAATTACTCCACTGGCTTATAATGGCGTAGCACAAATGTCTAATATTTaGGTGTCCACACCTAAACGT +
Preference number: 5 (lower is better)
Translates to: YVFIQYIVITPLAYNGVAQMSNI*VSTPKR
Trigger: ACGTTTAGGTGTGGACACCAAAATATTAGACATTTG...TGCTACGCCATTATAAGCCAGTGGAGTAATTACAATGTATTGGATGAAAACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS CAA 90 bp ACCCGCACGGCCCGGACACGCCCGCCCTCAGGAAACGCCGGACGCTaGTGGGGGCAACCACGGACCGCAGGACAGAGACCCGCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: TRTARTRPPSGNAGR*WGQPRTAGQRPAGG
Trigger: GCCGCCCGCGGGTCTCTGTCCTGCGGTCCGTGGTTGCCCCCACAAGCGTCCGGCGTTTCCTGAGGGCGGGCGTGTCCGGGCCGTGCGGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 72 bp CCAGGCGGTGATGTCGCCGCGGCCGAGGATCCTCTGTaGCAGCTCCGGCCGCGCAGCCCGGGGAGGGTGAGA +
Preference number: 6 (lower is better)
Translates to: PGGDVAAAEDPL*QLRPRSPGRVR
Trigger: TCTCACCCTCCCCGGGCTGCGCGGCCGGAGCTGGCACAGAGGATCCTCGGCCGCGGCGACATCACCGCCTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS CCA 72 bp GCAGGACAGAGACCCGCGGGCGGCGGGTTCTCTCGGTaGCGCCGTATCCAGAGCAGCGCCCGCGTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: AGQRPAGGGFSR*RRIQSSARVPR
Trigger: CCTGGGCACGCGGGCGCTGCTCTGGATACGGCGCCACCGAGAGAACCCGCCGCCCGCGGGTCTCTGTCCTGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 72 bp GGGAAGGCGAGAGACAGCGACGCTGGCTGGCGGGCGTaGGGCGGGACGGAGACAGGACAGGGCGGGGTCAGA +
Preference number: 6 (lower is better)
Translates to: GKARDSDAGWRA*GGTETGQGGVR
Trigger: TCTGACCCCGCCCTGTCCTGTCTCCGTCCCGCCCCACGCCCGCCAGCCAGCGTCGCTGTCTCTCGCCTTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS TCA 72 bp CGCCGTATCCAGAGCAGCGCCCGCGTGCCCAGGCGGTaGTGTCGCCGCGGCCGAGGATCCTCTGTGCCAGCT +
Preference number: 6 (lower is better)
Translates to: RRIQSSARVPRR*CRRGRGSSVPA
Trigger: AGCTGGCACAGAGGATCCTCGGCCGCGGCGACATCACCGCCTGGGCACGCGGGCGCTGCTCTGGATACGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572659.1
CDS GCA 72 bp TCTCTCGGTGGCGCCGTATCCAGAGCAGCGCCCGCGTaGCCAGGCGGTGATGTCGCCGCGGCCGAGGATCCT +
Preference number: 6 (lower is better)
Translates to: SLGGAVSRAAPA*PGGDVAAAEDP
Trigger: AGGATCCTCGGCCGCGGCGACATCACCGCCTGGGCACGCGGGCGCTGCTCTGGATACGGCGCCACCGAGAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 72 bp CGGACACGCCCGCCCTCAGGAAACGCCGGACGCTTGTaGGGGCAACCACGGACCGCAGGACAGAGACCCGCG +
Preference number: 6 (lower is better)
Translates to: RTRPPSGNAGRL*GQPRTAGQRPA
Trigger: CGCGGGTCTCTGTCCTGCGGTCCGTGGTTGCCCCCACAAGCGTCCGGCGTTTCCTGAGGGCGGGCGTGTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 72 bp GCCCGGACACGCCCGCCCTCAGGAAACGCCGGACGCTaGTGGGGGCAACCACGGACCGCAGGACAGAGACCC +
Preference number: 6 (lower is better)
Translates to: ARTRPPSGNAGR*WGQPRTAGQRP
Trigger: GGGTCTCTGTCCTGCGGTCCGTGGTTGCCCCCACAAGCGTCCGGCGTTTCCTGAGGGCGGGCGTGTCCGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 72 bp TCTCAGGCAGATCCCGACGGGGGCTCGGCGCCGCACTaGGCCCCAAGGGAGACGGAGGTGGAGAGTTCCAGA +
Preference number: 6 (lower is better)
Translates to: SQADPDGGSAPH*APRETEVESSR
Trigger: TCTGGAACTCTCCACCTCCGTCTCCCTTGGGGCCCAGTGCGGCGCCGAGCCCCCGTCGGGATCTGCCTGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS TCA 72 bp CCAGTCCACTTAAGCCACTGCGCACATTCTCCCAGTTaGCCTTCCCAGGGCTTATTACACTGGCTTGAGGGT +
Preference number: 6 (lower is better)
Translates to: PVHLSHCAHSPS*PSQGLLHWLEG
Trigger: ACCCTCAAGCCAGTGTAATAAGCCCTGGGAAGGTCAACTGGGAGAATGTGCGCAGTGGCTTAAGTGGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 72 bp TTCCCCATGTTGAGAGGCAGTGATTATTTCCCCAGCTaGATCACCAACCTCCTCGCCAGTCCACTTAAGCCA +
Preference number: 6 (lower is better)
Translates to: FPMLRGSDYFPS*ITNLLASPLKP
Trigger: TGGCTTAAGTGGACTGGCGAGGAGGTTGGTGATGCAGCTGGGGAAATAATCACTGCCTCTCAACATGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 72 bp TGCTTGAGTGCCCAAACCAAATCGGGTTATTTGGCCTaGATCAGCCACACTGGCAAAGCCACCGAATCCCAG +
Preference number: 6 (lower is better)
Translates to: CLSAQTKSGYLA*ISHTGKATESQ
Trigger: CTGGGATTCGGTGGCTTTGCCAGTGTGGCTGATCAAGGCCAAATAACCCGATTTGGTTTGGGCACTCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 72 bp GCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTaGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACC +
Preference number: 6 (lower is better)
Translates to: APVSNAIILVAW*LWRSCLPHERT
Trigger: GGTCCGCTCATGGGGCAAACAGCTTCTCCATAACCACCAAGCCACTAATATGATAGCATTACTCACAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 72 bp AAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTaGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGG +
Preference number: 6 (lower is better)
Translates to: KAPVSNAIILVA*WLWRSCLPHER
Trigger: CCGCTCATGGGGCAAACAGCTTCTCCATAACCACCAAGCCACTAATATGATAGCATTACTCACAGGGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS TCA 72 bp GTATTCAGTGTGAAGAGTACTCCACCTTTGGGCAGTTaGAGGAACCATCGGTCCATCTTTAGGTCGGTGCTT +
Preference number: 6 (lower is better)
Translates to: VFSVKSTPPLGS*RNHRSIFRSVL
Trigger: AAGCACCGACCTAAAGATGGACCGATGGTTCCTTCAACTGCCCAAAGGTGGAGTACTCTTCACACTGAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 72 bp ACTGCAACCAGCCTCGGAGTAAACGAAAATGCCCACTaGGGATATCTGACACCTTCCATTCACAAGCATCTA +
Preference number: 6 (lower is better)
Translates to: TATSLGVNENAH*GYLTPSIHKHL
Trigger: TAGATGCTTGTGAATGGAAGGTGTCAGATATCCGCAGTGGGCATTTTCGTTTACTCCGAGGCTGGTTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 72 bp CAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATaGGAACCTCATCTCCTGGTGCATTCTCTACTAGCC +
Preference number: 6 (lower is better)
Translates to: QRQWQNLLRNGQ*EPHLLVHSLLA
Trigger: GGCTAGTAGAGAATGCACCAGGAGATGAGGTTCCAATTGGCCATTCCTTAACAGGTTTTGCCACTGCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 72 bp TACTATTGCTTGAGTGCCCAAACCAAATCGGGTTATTaGGCCTTGATCAGCCACACTGGCAAAGCCACCGAA +
Preference number: 6 (lower is better)
Translates to: YYCLSAQTKSGY*ALISHTGKATE
Trigger: TTCGGTGGCTTTGCCAGTGTGGCTGATCAAGGCCAAATAACCCGATTTGGTTTGGGCACTCAAGCAATAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 90 bp TACAGGCTTTACTATTGCTTGAGTGCCCAAACCAAATCGGGTTATTaGGCCTTGATCAGCCACACTGGCAAAGCCACCGAATCCCAGATA +
Preference number: 6 (lower is better)
Translates to: YRLYYCLSAQTKSGY*ALISHTGKATESQI
Trigger: TATCTGGGATTCGGTGGCTTTGCCAGTGTGGCTGATCAAGGCCAAATAACCCGATTTGGTTTGGGCACTCAAGCAATAGTAAAGCCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 72 bp AGTAACCACACCCCAGTTAGGGAATGTGTGTATTTTTaGAGTACCATAATCAGCAGGTGGCTGTGGTGTGAG +
Preference number: 6 (lower is better)
Translates to: SNHTPVRECVYF*STIISRWLWCE
Trigger: CTCACACCACAGCCACCTGCTGATTATGGTACTGCAAAAATACACACATTCCCTAACTGGGGTGTGGTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 72 bp ACTAAAGACTGCAACCAGCCTCGGAGTAAACGAAAATaGCCACTGCGGATATCTGACACCTTCCATTCACAA +
Preference number: 6 (lower is better)
Translates to: TKDCNQPRSKRK*PLRISDTFHSQ
Trigger: TTGTGAATGGAAGGTGTCAGATATCCGCAGTGGGCATTTTCGTTTACTCCGAGGCTGGTTGCAGTCTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 72 bp GTGAGTAATGCTATCATATTAGTGGCTTGGTGGTTATaGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAA +
Preference number: 6 (lower is better)
Translates to: VSNAIILVAWWL*RSCLPHERTLE
Trigger: TTCCAAGGTCCGCTCATGGGGCAAACAGCTTCTCCATAACCACCAAGCCACTAATATGATAGCATTACTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 72 bp GGAAGTGAGGTAATGACAACATCAGGAAGATCCATGTaGTGCCCTTCAGAAGACAAAGACTTCTTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: GSEVMTTSGRSM*CPSEDKDFLLP
Trigger: GGGAAGCAAGAAGTCTTTGTCTTCTGAAGGGCACCACATGGATCTTCCTGATGTTGTCATTACCTCACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 90 bp CTTTACTATTGCTTGAGTGCCCAAACCAAATCGGGTTATTTGGCCTaGATCAGCCACACTGGCAAAGCCACCGAATCCCAGATAATTGAA +
Preference number: 6 (lower is better)
Translates to: LYYCLSAQTKSGYLA*ISHTGKATESQIIE
Trigger: TTCAATTATCTGGGATTCGGTGGCTTTGCCAGTGTGGCTGATCAAGGCCAAATAACCCGATTTGGTTTGGGCACTCAAGCAATAGTAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS TCA 72 bp AATGAAGCTTTAACGTCCAGCTTCCACTGCTTAAACTaGGCACAGGACGTGCACTTGGATAGTAAACCAGGT +
Preference number: 6 (lower is better)
Translates to: NEALTSSFHCLN*AQDVHLDSKPG
Trigger: ACCTGGTTTACTATCCAAGTGCACGTCCTGTGCTCAGTTTAAGCAGTGGAAGCTGGACGTTAAAGCTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 72 bp AGTGAGGTAATGACAACATCAGGAAGATCCATGTGGTaGCCTTCAGAAGACAAAGACTTCTTGCTTCCCTCA +
Preference number: 6 (lower is better)
Translates to: SEVMTTSGRSMW*PSEDKDFLLPS
Trigger: TGAGGGAAGCAAGAAGTCTTTGTCTTCTGAAGGGCACCACATGGATCTTCCTGATGTTGTCATTACCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 72 bp GTGTATTTTTGCAGTACCATAATCAGCAGGTGGCTGTaGTGTGAGCTGGGGATCATACCAGATGTATTCAGT +
Preference number: 6 (lower is better)
Translates to: VYFCSTIISRWL*CELGIIPDVFS
Trigger: ACTGAATACATCTGGTATGATCCCCAGCTCACACCACAGCCACCTGCTGATTATGGTACTGCAAAAATACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 72 bp TGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTaGGAATACTCGTACATTTCCTCAGTAATAACCCAT +
Preference number: 6 (lower is better)
Translates to: WLWRSCLPHERT*EYSYISSVITH
Trigger: ATGGGTTATTACTGAGGAAATGTACGAGTATTCCAAGGTCCGCTCATGGGGCAAACAGCTTCTCCATAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 72 bp ATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTaGCCCCATGAGCGGACCTTGGAATACTCGTACATT +
Preference number: 6 (lower is better)
Translates to: IILVAWWLWRSC*PHERTLEYSYI
Trigger: AATGTACGAGTATTCCAAGGTCCGCTCATGGGGCAAACAGCTTCTCCATAACCACCAAGCCACTAATATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 90 bp AGTAATGCTATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTaGCCCCATGAGCGGACCTTGGAATACTCGTACATTTCCTCAGTA +
Preference number: 6 (lower is better)
Translates to: SNAIILVAWWLWRSC*PHERTLEYSYISSV
Trigger: TACTGAGGAAATGTACGAGTATTCCAAGGTCCGCTCATGGGGCAAACAGCTTCTCCATAACCACCAAGCCACTAATATGATAGCATTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 72 bp AAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATaGCCAATTGGAACCTCATCTCCTGGTGCATTCTCT +
Preference number: 6 (lower is better)
Translates to: KKSKAVAKPVKE*PIGTSSPGAFS
Trigger: AGAGAATGCACCAGGAGATGAGGTTCCAATTGGCCATTCCTTAACAGGTTTTGCCACTGCCTTTGACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 72 bp AAATTTCATTCCACTTGGCAGCAAAATCAGCATGCTTaGGTGGAGGTAGGTAGTATGTTGGGTTGGACAGCA +
Preference number: 6 (lower is better)
Translates to: KFHSTWQQNQHA*VEVGSMLGWTA
Trigger: TGCTGTCCAACCCAACATACTACCTACCTCCACCAAAGCATGCTGATTTTGCTGCCAAGTGGAATGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 72 bp GCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTaGCTAGCCACAAGTGAGACAAGAGGGACACTGCAT +
Preference number: 6 (lower is better)
Translates to: ANLYLFSRLLLY*LATSETRGTLH
Trigger: ATGCAGTGTCCCTCTTGTCTCACTTGTGGCTAGCAAATACAGCAGCAGCCTTGAGAATAAATACAGATTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 90 bp TACCCCTATTGGGTTCATGCAGATGGATGTTTTGCAAATGTAATTTaGTGTCCTGGACTAAAGACTGCAACCAGCCTCGGAGTAAACGAA +
Preference number: 6 (lower is better)
Translates to: YPYWVHADGCFANVI*CPGLKTATSLGVNE
Trigger: TTCGTTTACTCCGAGGCTGGTTGCAGTCTTTAGTCCAGGACACAAAATTACATTTGCAAAACATCCATCTGCATGAACCCAATAGGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS TCA 72 bp ATTCTCAAGGCTGCTGCTGTATTTGCTAGCCACAAGTaGGACAAGAGGGACACTGCATTTGATTTGGATTTT +
Preference number: 6 (lower is better)
Translates to: ILKAAAVFASHK*DKRDTAFDLDF
Trigger: AAAATCCAAATCAAATGCAGTGTCCCTCTTGTCTCACTTGTGGCTAGCAAATACAGCAGCAGCCTTGAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 72 bp TCCTATCATGTCTTACAGGCTTTACTATTGCTTGAGTaGCCAAACCAAATCGGGTTATTTGGCCTTGATCAG +
Preference number: 6 (lower is better)
Translates to: SYHVLQALLLLE*PNQIGLFGLDQ
Trigger: CTGATCAAGGCCAAATAACCCGATTTGGTTTGGGCACTCAAGCAATAGTAAAGCCTGTAAGACATGATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 72 bp AAGGAGGCAGATTGTTACCATAAATTTCATTCCACTTaGCAGCAAAATCAGCATGCTTTGGTGGAGGTAGGT +
Preference number: 6 (lower is better)
Translates to: KEADCYHKFHST*QQNQHALVEVG
Trigger: ACCTACCTCCACCAAAGCATGCTGATTTTGCTGCCAAGTGGAATGAAATTTATGGTAACAATCTGCCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 72 bp TGGGTTAAAACTTCTCCACCCATCAATCCAGGAATATaGCTGAAAATGAACTATGTCATACACAGCTCGTCC +
Preference number: 6 (lower is better)
Translates to: WVKTSPPINPGI*LKMNYVIHSSS
Trigger: GGACGAGCTGTGTATGACATAGTTCATTTTCAGCCATATTCCTGGATTGATGGGTGGAGAAGTTTTAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 72 bp TGCAGATGGATGTTTTGCAAATGTAATTTTGTGTCCTaGACTAAAGACTGCAACCAGCCTCGGAGTAAACGA +
Preference number: 6 (lower is better)
Translates to: CRWMFCKCNFVS*TKDCNQPRSKR
Trigger: TCGTTTACTCCGAGGCTGGTTGCAGTCTTTAGTCCAGGACACAAAATTACATTTGCAAAACATCCATCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 90 bp GGGAATTTAAGAGAAGCAAAGCACGATATACACTTTTCAGTCTCATaGCTGAAGAATAAGCAGACACGGCTTCCCCACTCACAAATACCA +
Preference number: 6 (lower is better)
Translates to: GNLREAKHDIHFSVS*LKNKQTRLPHSQIP
Trigger: TGGTATTTGTGAGTGGGGAAGCCGTGTCTGCTTATTCTTCAGCAATGAGACTGAAAAGTGTATATCGTGCTTTGCTTCTCTTAAATTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 90 bp AAAGGGGAAAATAATCCTATCATGTCTTACAGGCTTTACTATTGCTaGAGTGCCCAAACCAAATCGGGTTATTTGGCCTTGATCAGCCAC +
Preference number: 6 (lower is better)
Translates to: KGENNPIMSYRLYYC*SAQTKSGYLALISH
Trigger: GTGGCTGATCAAGGCCAAATAACCCGATTTGGTTTGGGCACTCAAGCAATAGTAAAGCCTGTAAGACATGATAGGATTATTTTCCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS TCA 72 bp ATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTaGGCTAACCAATTTCCAGCTCCATTCTTTAAGATG +
Preference number: 6 (lower is better)
Translates to: IGPSLGRCFLIC*ANQFPAPFFKM
Trigger: CATCTTAAAGAATGGAGCTGGAAATTGGTTAGCTCAGCAAATTAGAAAGCACCGACCTAAAGATGGACCGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 72 bp TTCCATGACATCCACTACAGCCTGTTTCCATATATTTaGTTTAGATCCTTTATCTACTCCAGTCACCAAGGC +
Preference number: 6 (lower is better)
Translates to: FHDIHYSLFPYI*FRSFIYSSHQG
Trigger: GCCTTGGTGACTGGAGTAGATAAAGGATCTAAAGCAAATATATGGAAACAGGCTGTAGTGGATGTCATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 72 bp CTTGCTCTGCTTCCTGTATACTGGCCATGGGACTATTaGCATGATGATCAAACCAAAACATTTTGTAATGTG +
Preference number: 6 (lower is better)
Translates to: LALLPVYWPWDY*HDDQTKTFCNV
Trigger: CACATTACAAAATGTTTTGGTTTGATCATCATGGCAATAGTCCCATGGCCAGTATACAGGAAGCAGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 72 bp GTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATaGCTTGCACGAGACTTTTGTCTCATTGCTTGGATT +
Preference number: 6 (lower is better)
Translates to: VTALLIALKRCK*LARDFCLIAWI
Trigger: AATCCAAGCAATGAGACAAAAGTCTCGTGCAAGCCATTTGCATCTTTTTAGAGCTATCAGAAGTGCAGTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS TCA 72 bp CCCAAAGAAGATGATGAAGTACTGACATTCTTCGAGTaGGTGGACTCAGTTGTCATTCCTCTCAACTTTTTA +
Preference number: 6 (lower is better)
Translates to: PKEDDEVLTFFE*VDSVVIPLNFL
Trigger: TAAAAAGTTGAGAGGAATGACAACTGAGTCCACTCACTCGAAGAATGTCAGTACTTCATCATCTTCTTTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 72 bp GAAAATAATCCTATCATGTCTTACAGGCTTTACTATTaGTTGAGTGCCCAAACCAAATCGGGTTATTTGGCC +
Preference number: 6 (lower is better)
Translates to: ENNPIMSYRLYY*LSAQTKSGYLA
Trigger: GGCCAAATAACCCGATTTGGTTTGGGCACTCAAGCAATAGTAAAGCCTGTAAGACATGATAGGATTATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 72 bp AATAATCCTATCATGTCTTACAGGCTTTACTATTGCTaGAGTGCCCAAACCAAATCGGGTTATTTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: NNPIMSYRLYYC*SAQTKSGYLAL
Trigger: CAAGGCCAAATAACCCGATTTGGTTTGGGCACTCAAGCAATAGTAAAGCCTGTAAGACATGATAGGATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 72 bp ATTGCCATGATGATCAAACCAAAACATTTTGTAATGTaGATCCCACACATCCATCATGGCACCATTATACCT +
Preference number: 6 (lower is better)
Translates to: IAMMIKPKHFVM*IPHIHHGTIIP
Trigger: AGGTATAATGGTGCCATGATGGATGTGTGGGATGCACATTACAAAATGTTTTGGTTTGATCATCATGGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS GCA 72 bp GCTGGAGACATTGATATATGGCCCATAAAAGACATATaGAATTCTTGTGATTGTGGGTTCCATCTGAAAAGT +
Preference number: 6 (lower is better)
Translates to: AGDIDIWPIKDI*NSCDCGFHLKS
Trigger: ACTTTTCAGATGGAACCCACAATCACAAGAATTGCATATGTCTTTTATGGGCCATATATCAATGTCTCCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 72 bp TTGCTAGCCACAAGTGAGACAAGAGGGACACTGCATTaGATTTGGATTTTGATAATTCTTTCCTCAATGGTT +
Preference number: 6 (lower is better)
Translates to: LLATSETRGTLH*IWILIILSSMV
Trigger: AACCATTGAGGAAAGAATTATCAAAATCCAAATCAAATGCAGTGTCCCTCTTGTCTCACTTGTGGCTAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS TCA 72 bp ATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTaGCTTCTTTGTTCTGGCAAAGACTCTCTCCTTTTA +
Preference number: 6 (lower is better)
Translates to: IYSASLSKAPFI*LLCSGKDSLLL
Trigger: TAAAAGGAGAGAGTCTTTGCCAGAACAAAGAAGTCAAATGAAAGGCGCCTTTGATAGAGATGCTGAATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CAA 72 bp AGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTaGTTCTGGCAAAGACTCTCTCCTTTTAAATTTTCT +
Preference number: 6 (lower is better)
Translates to: SISIKGAFHLTS*FWQRLSPFKFS
Trigger: AGAAAATTTAAAAGGAGAGAGTCTTTGCCAGAACAAAGAAGTCAAATGAAAGGCGCCTTTGATAGAGATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS TCA 72 bp ACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATaGTCAACAACTAGCAGAGTTTGGGAATTTAAGAGA +
Preference number: 6 (lower is better)
Translates to: TEFIGESSCLSI*STTSRVWEFKR
Trigger: TCTCTTAAATTCCCAAACTCTGCTAGTTGTTGATCATATTGAGAGGCAAGAAGATTCCCCAATAAATTCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1
CDS CCA 72 bp ACTATCAATAAATCTGCAGCTGGAGACATTGATATATaGCCCATAAAAGACATATGCAATTCTTGTGATTGT +
Preference number: 6 (lower is better)
Translates to: TINKSAAGDIDI*PIKDICNSCDC
Trigger: ACAATCACAAGAATTGCATATGTCTTTTATGGGCCATATATCAATGTCTCCAGCTGCAGATTTATTGATAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310045.9
ENST00000572659.1