Pregenerated sensors for DSCC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000136982Ensembl transcript IDs: ENST00000313655.5, ENST00000521795.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAAAGGAACTTTATCAAGCATTCCAAAACCAACTAGAAATTACTTaGAGTTTTCGAGTGAGCATTGCCTGTGCCAGTATTCTTCATTAT | + |
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Preference number: 1 (lower is better) Translates to: VKELYQAFQNQLEIT*SFRVSIACASILHY Trigger: ATAATGAAGAATACTGGCACAGGCAATGCTCACTCGAAAACTTCAAGTAATTTCTAGTTGGTTTTGGAATGCTTGATAAAGTTCCTTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| 3UTR-3UTR TCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCAAGCAACTTGAGTCCTaGAGAAAAGACCGTTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: HLEASSLGGRLKVEGNSLKQLES*RKDRCS Trigger: AGAACAACGGTCTTTTCTTCAGGACTCAAGTTGCTT...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| 3UTR CAA 90 bp | TGTAAAGGAACTTTATCAAGCATTCCAAAACCAACTAGAAATTACTaGAAGTTTTCGAGTGAGCATTGCCTGTGCCAGTATTCTTCATTA | + |
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Preference number: 2 (lower is better) Translates to: CKGTLSSIPKPTRNY*KFSSEHCLCQYSSL Trigger: TAATGAAGAATACTGGCACAGGCAATGCTCACTCGAAAACTTCAAGTAATTTCTAGTTGGTTTTGGAATGCTTGATAAAGTTCCTTTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR GCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCCCGCGCCCGGGTGGCTaGGGGCTTGGCGGGCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLPRPGG*GLGGQE Trigger: TTCTTGCCCGCCAAGCCCGCAGCCACCCGGGCGCGG...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR GCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCGCAGAAGTCGCCGGCTaGAGCGCCGCTGGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLAEVAG*SAAGPR Trigger: CCTGGGGCCAGCGGCGCTGCAGCCGGCGACTTCTGC...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR CCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCCCATCCTCCAGCTGCTaGCACAGCGTGGGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLPSSSC*HSVGSS Trigger: GCTGGAGCCCACGCTGTGCCAGCAGCTGGAGGATGG...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR CCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCGGGTGGCTGCGGGCTTaGCGGGCAAGAAAGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLGWLRA*RARKKF Trigger: GAACTTCTTTCTTGCCCGCCAAGCCCGCAGCCACCC...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR CCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCCGGCCGCATTCAGCTTaGCGATCTGCAGCGTCGCAT | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLRPHSA*RSAASH Trigger: ATGCGACGCTGCAGATCGCCAAGCTGAATGCGGCCG...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR GCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCTTCAGCTTGGCGATCTaGAGCGTCGCATCCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLFSLAI*SVASTS Trigger: CGAGGTGGATGCGACGCTGCAGATCGCCAAGCTGAA...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR CCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCTTCCTCTGGCTCCAATaGTCCGAGTTCCTGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLFLWLQ*SEFLKA Trigger: TGCCTTCAGGAACTCGGACCATTGGAGCCAGAGGAA...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR GCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCCTGCACAGCACAGCTTaGTCGTCTTTATCACCACGA | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLLHSTA*SSLSPR Trigger: TCGTGGTGATAAAGACGAGCAAGCTGTGCTGTGCAG...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR TCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCAATGGTCCGAGTTCCTaGAGGCATGTGTTCAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLNGPSS*RHVFKG Trigger: TCCTTTGAACACATGCCTTCAGGAACTCGGACCATT...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR TCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCAATTTCACCGCATTCTaGAGTAGCATTCGTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLNFTAF*SSIRAA Trigger: AGCAGCACGAATGCTACTTCAGAATGCGGTGAAATT...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR TCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCTGCTGCCACACTTCTTaGAACTCAGCGAGATTGAAT | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLCCHTS*NSARLN Trigger: ATTCAATCTCGCTGAGTTTCAAGAAGTGTGGCAGCA...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR CCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCTTCTATCATTTCCTCTaGCTCCAATGGTCCGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLFYHFL*LQWSEF Trigger: GAACTCGGACCATTGGAGCCAGAGGAAATGATAGAA...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR TCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCGAAACTCAGCGAGATTaGATTTCACCGCATTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLETQRD*ISPHSE Trigger: TTCAGAATGCGGTGAAATTCAATCTCGCTGAGTTTC...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR GCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCTTTTCGAGTGAGCATTaGCTGTGCCAGTATTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLFSSEH*LCQYSS Trigger: TGAAGAATACTGGCACAGGCAATGCTCACTCGAAAA...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR CCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCTCTTCCTTCTTCAACTaGTCCGGAGTTTTACAACCA | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLSSFFN*SGVLQP Trigger: TGGTTGTAAAACTCCGGACCAGTTGAAGAAGGAAGA...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR TCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCGAATCCTTCTCTTTTTaGCTGTCAGGTCCTTCATAT | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLESFSF*LSGPSY Trigger: ATATGAAGGACCTGACAGTCAAAAAGAGAAGGATTC...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR TCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCGCTAAACCCTTAAGCTaGTCAAGACTAGTTACCATT | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLAKPLS*SRLVTI Trigger: AATGGTAACTAGTCTTGATCAGCTTAAGGGTTTAGC...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR TCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCCTTTCAGCAAAAATATaGTTTCTGGTCTCGAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLLSAKI*FLVSSV Trigger: GACACTCGAGACCAGAAATCATATTTTTGCTGAAAG...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR GCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCAATGCACCTATGGTTTaGTTCTCTCCACACAAATCT | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLNAPMV*FSPHKS Trigger: AGATTTGTGTGGAGAGAAGCAAACCATAGGTGCATT...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR GCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCCATATTGGAAGTGTCTaGTATCTTCAAGTCGTATGT | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLHIGSV*YLQVVC Trigger: ACATACGACTTGAAGATAGCAGACACTTCCAATATG...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR GCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCTATTTCTTCCTCACTTaGCTGAATTTGATCAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLYFFLT*LNLIKQ Trigger: TTGCTTGATCAAATTCAGGCAAGTGAGGAAGAAATA...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR CCA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCGTCAGGTCCTTCATATaGATTTTCCATCAAAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: HLEASSLGGRLKVEGNSLVRSFI*IFHQKF Trigger: AAACTTTTGATGGAAAATCCATATGAAGGACCTGAC...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| 3UTR CAA 72 bp | ACTTTATCAAGCATTCCAAAACCAACTAGAAATTACTaGAAGTTTTCGAGTGAGCATTGCCTGTGCCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: TLSSIPKPTRNY*KFSSEHCLCQY Trigger: ATACTGGCACAGGCAATGCTCACTCGAAAACTTCAAGTAATTTCTAGTTGGTTTTGGAATGCTTGATAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS GCA 90 bp | CTGGCACAGCGTGGGCTCCAGCTCCAGCAGGCAGAAGTCGCCGGCTaGAGCGCCGCTGGCCCCAGGGCCGAAGCCCAGGCAGTGCACCGC | + |
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Preference number: 5 (lower is better) Translates to: LAQRGLQLQQAEVAG*SAAGPRAEAQAVHR Trigger: GCGGTGCACTGCCTGGGCTTCGGCCCTGGGGCCAGCGGCGCTGCAGCCGGCGACTTCTGCCTGCTGGAGCTGGAGCCCACGCTGTGCCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000313655.5 ENST00000521795.1 |
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| CDS CCA 90 bp | CCTCTTCATCGCAGCGCCGGGTCTAGGAGTCCCGCCGCGCCCGGGTaGCTGCGGGCTTGGCGGGCAAGAAAGAAGTTCCCAAGCAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: PLHRSAGSRSPAAPG*LRAWRARKKFPSSR Trigger: CCGGCTGCTTGGGAACTTCTTTCTTGCCCGCCAAGCCCGCAGCCACCCGGGCGCGGCGGGACTCCTAGACCCGGCGCTGCGATGAAGAGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS GCA 90 bp | TTCATCGCAGCGCCGGGTCTAGGAGTCCCGCCGCGCCCGGGTGGCTaGGGGCTTGGCGGGCAAGAAAGAAGTTCCCAAGCAGCCGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: FIAAPGLGVPPRPGG*GLGGQERSSQAAGR Trigger: CCTTCCGGCTGCTTGGGAACTTCTTTCTTGCCCGCCAAGCCCGCAGCCACCCGGGCGCGGCGGGACTCCTAGACCCGGCGCTGCGATGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS GCA 90 bp | CAGTGCACCGCCGGCAGCAGCTCGGCCGCATTCAGCTTGGCGATCTaGAGCGTCGCATCCACCTCGTCGCGGGTCCTCTTCATCGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: QCTAGSSSAAFSLAI*SVASTSSRVLFIAA Trigger: CGCTGCGATGAAGAGGACCCGCGACGAGGTGGATGCGACGCTGCAGATCGCCAAGCTGAATGCGGCCGAGCTGCTGCCGGCGGTGCACTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000313655.5 ENST00000521795.1 |
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| CDS CCA 90 bp | AGCCCAGGCAGTGCACCGCCGGCAGCAGCTCGGCCGCATTCAGCTTaGCGATCTGCAGCGTCGCATCCACCTCGTCGCGGGTCCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SPGSAPPAAARPHSA*RSAASHPPRRGSSS Trigger: TGAAGAGGACCCGCGACGAGGTGGATGCGACGCTGCAGATCGCCAAGCTGAATGCGGCCGAGCTGCTGCCGGCGGTGCACTGCCTGGGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000313655.5 ENST00000521795.1 |
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| CDS-3UTR CAA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCCGGGTGGCTGCGGGCTaGGCGGGCAAGAAAGAAGTT | + |
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Preference number: 5 (lower is better) Translates to: HLEASSLGGRLKVEGNSLRVAAG*AGKKEV Trigger: AACTTCTTTCTTGCCCGCCAAGCCCGCAGCCACCCG...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR CAA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCTCGGCCGCATTCAGCTaGGCGATCTGCAGCGTCGCA | + |
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Preference number: 5 (lower is better) Translates to: HLEASSLGGRLKVEGNSLSAAFS*AICSVA Trigger: TGCGACGCTGCAGATCGCCAAGCTGAATGCGGCCGA...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR CAA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCACTGCACAGCACAGCTaGCTCGTCTTTATCACCACG | + |
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Preference number: 5 (lower is better) Translates to: HLEASSLGGRLKVEGNSLTAQHS*LVFITT Trigger: CGTGGTGATAAAGACGAGCAAGCTGTGCTGTGCAGT...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR CAA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCCTGCTGCCACACTTCTaGAAACTCAGCGAGATTGAA | + |
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Preference number: 5 (lower is better) Translates to: HLEASSLGGRLKVEGNSLLLPHF*KLSEIE Trigger: TTCAATCTCGCTGAGTTTCAAGAAGTGTGGCAGCAG...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS TCA 90 bp | CTTCAGGAACACTCTGCTGCCACACTTCTTGAAACTCAGCGAGATTaGATTTCACCGCATTCTGAAGTAGCATTCGTGCTGCTGCTCTAC | + |
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Preference number: 5 (lower is better) Translates to: LQEHSAATLLETQRD*ISPHSEVAFVLLLY Trigger: GTAGAGCAGCAGCACGAATGCTACTTCAGAATGCGGTGAAATTCAATCTCGCTGAGTTTCAAGAAGTGTGGCAGCAGAGTGTTCCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR CAA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCTCGAAGCCATCGTGTTaGTATTTCATGTTCATGACA | + |
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Preference number: 5 (lower is better) Translates to: HLEASSLGGRLKVEGNSLSKPSC*YFMFMT Trigger: TGTCATGAACATGAAATACAAACACGATGGCTTCGA...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS GCA 90 bp | GCTATCTTCAAGTCGTATGTTTTGTCTTTACTGCACAGCACAGCTTaGTCGTCTTTATCACCACGAATCACAAGACTGTGTCCATCCTCC | + |
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Preference number: 5 (lower is better) Translates to: AIFKSYVLSLLHSTA*SSLSPRITRLCPSS Trigger: GGAGGATGGACACAGTCTTGTGATTCGTGGTGATAAAGACGAGCAAGCTGTGCTGTGCAGTAAAGACAAAACATACGACTTGAAGATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000313655.5 ENST00000521795.1 |
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| CDS-3UTR CAA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCATGAAAAGCAACATATaGGAAGTGTCTGCTATCTTC | + |
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Preference number: 5 (lower is better) Translates to: HLEASSLGGRLKVEGNSLMKSNI*EVSAIF Trigger: GAAGATAGCAGACACTTCCAATATGTTGCTTTTCAT...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR CAA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCTTATTTCTTCCTCACTaGCCTGAATTTGATCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: HLEASSLGGRLKVEGNSLLFLPH*PEFDQA Trigger: TGCTTGATCAAATTCAGGCAAGTGAGGAAGAAATAA...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR CAA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCCTCTCCACACAAATCTaGAATATATGGAGCAATATC | + |
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Preference number: 5 (lower is better) Translates to: HLEASSLGGRLKVEGNSLLSTQI*NIWSNI Trigger: GATATTGCTCCATATATTCAAGATTTGTGTGGAGAG...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS-3UTR CAA 90 bp | CACCTAGAGGCTTCCAGTTTGGGTGGAAGGCTAAAAGTAGAGGGGAACTCACTCCCAACTAGAAATTACTaGAAGTTTTCGAGTGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: HLEASSLGGRLKVEGNSLPTRNY*KFSSEH Trigger: ATGCTCACTCGAAAACTTCAAGTAATTTCTAGTTGG...GAGTGAGTTCCCCTCTACTTTTAGCCTTCCACCCAAACTGGAAGCCTCTAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS TCA 90 bp | TCTCAGACTTTTATAAATCAGAGTACAGAAAAGAGCACCTCAGTGTaGATAATGTTACAGTGTGAATCTTCCTTCTTCAACTGGTCCGGA | + |
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Preference number: 5 (lower is better) Translates to: SQTFINQSTEKSTSV*IMLQCESSFFNWSG Trigger: TCCGGACCAGTTGAAGAAGGAAGATTCACACTGTAACATTATTCACACTGAGGTGCTCTTTTCTGTACTCTGATTTATAAAAGTCTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521795.1 |
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| CDS GCA 72 bp | CGTGGGCTCCAGCTCCAGCAGGCAGAAGTCGCCGGCTaGAGCGCCGCTGGCCCCAGGGCCGAAGCCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: RGLQLQQAEVAG*SAAGPRAEAQA Trigger: TGCCTGGGCTTCGGCCCTGGGGCCAGCGGCGCTGCAGCCGGCGACTTCTGCCTGCTGGAGCTGGAGCCCACG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000313655.5 ENST00000521795.1 |
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| CDS CCA 72 bp | CGCAGCGCCGGGTCTAGGAGTCCCGCCGCGCCCGGGTaGCTGCGGGCTTGGCGGGCAAGAAAGAAGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: RSAGSRSPAAPG*LRAWRARKKFP Trigger: TGGGAACTTCTTTCTTGCCCGCCAAGCCCGCAGCCACCCGGGCGCGGCGGGACTCCTAGACCCGGCGCTGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS GCA 72 bp | GCGCCGGGTCTAGGAGTCCCGCCGCGCCCGGGTGGCTaGGGGCTTGGCGGGCAAGAAAGAAGTTCCCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: APGLGVPPRPGG*GLGGQERSSQA Trigger: TGCTTGGGAACTTCTTTCTTGCCCGCCAAGCCCGCAGCCACCCGGGCGCGGCGGGACTCCTAGACCCGGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS CCA 72 bp | AGTGCACCGCCGGCAGCAGCTCGGCCGCATTCAGCTTaGCGATCTGCAGCGTCGCATCCACCTCGTCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: SAPPAAARPHSA*RSAASHPPRRG Trigger: CCCGCGACGAGGTGGATGCGACGCTGCAGATCGCCAAGCTGAATGCGGCCGAGCTGCTGCCGGCGGTGCACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000313655.5 ENST00000521795.1 |
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| CDS CAA 72 bp | CAGTGCACCGCCGGCAGCAGCTCGGCCGCATTCAGCTaGGCGATCTGCAGCGTCGCATCCACCTCGTCGCGG | + |
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Preference number: 6 (lower is better) Translates to: QCTAGSSSAAFS*AICSVASTSSR Trigger: CCGCGACGAGGTGGATGCGACGCTGCAGATCGCCAAGCTGAATGCGGCCGAGCTGCTGCCGGCGGTGCACTG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000313655.5 ENST00000521795.1 |
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| CDS CAA 90 bp | AAGCCCAGGCAGTGCACCGCCGGCAGCAGCTCGGCCGCATTCAGCTaGGCGATCTGCAGCGTCGCATCCACCTCGTCGCGGGTCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: KPRQCTAGSSSAAFS*AICSVASTSSRVLF Trigger: GAAGAGGACCCGCGACGAGGTGGATGCGACGCTGCAGATCGCCAAGCTGAATGCGGCCGAGCTGCTGCCGGCGGTGCACTGCCTGGGCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000313655.5 ENST00000521795.1 |
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| CDS GCA 72 bp | GCCGGCAGCAGCTCGGCCGCATTCAGCTTGGCGATCTaGAGCGTCGCATCCACCTCGTCGCGGGTCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: AGSSSAAFSLAI*SVASTSSRVLF Trigger: GAAGAGGACCCGCGACGAGGTGGATGCGACGCTGCAGATCGCCAAGCTGAATGCGGCCGAGCTGCTGCCGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000313655.5 ENST00000521795.1 |
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| CDS CCA 72 bp | TCTAGGAGTCCCGCCGCGCCCGGGTGGCTGCGGGCTTaGCGGGCAAGAAAGAAGTTCCCAAGCAGCCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SRSPAAPGWLRA*RARKKFPSSRK Trigger: CTTCCGGCTGCTTGGGAACTTCTTTCTTGCCCGCCAAGCCCGCAGCCACCCGGGCGCGGCGGGACTCCTAGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS TCA 72 bp | CACTCTGCTGCCACACTTCTTGAAACTCAGCGAGATTaGATTTCACCGCATTCTGAAGTAGCATTCGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: HSAATLLETQRD*ISPHSEVAFVL Trigger: CAGCACGAATGCTACTTCAGAATGCGGTGAAATTCAATCTCGCTGAGTTTCAAGAAGTGTGGCAGCAGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS CAA 90 bp | TGCTATCTTCAAGTCGTATGTTTTGTCTTTACTGCACAGCACAGCTaGCTCGTCTTTATCACCACGAATCACAAGACTGTGTCCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: CYLQVVCFVFTAQHS*LVFITTNHKTVSIL Trigger: GAGGATGGACACAGTCTTGTGATTCGTGGTGATAAAGACGAGCAAGCTGTGCTGTGCAGTAAAGACAAAACATACGACTTGAAGATAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000313655.5 ENST00000521795.1 |
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| CDS GCA 72 bp | AAGTCGTATGTTTTGTCTTTACTGCACAGCACAGCTTaGTCGTCTTTATCACCACGAATCACAAGACTGTGT | + |
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Preference number: 6 (lower is better) Translates to: KSYVLSLLHSTA*SSLSPRITRLC Trigger: ACACAGTCTTGTGATTCGTGGTGATAAAGACGAGCAAGCTGTGCTGTGCAGTAAAGACAAAACATACGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000313655.5 ENST00000521795.1 |
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| CDS CAA 90 bp | AAAAGCAACATATTGGAAGTGTCTGCTATCTTCAAGTCGTATGTTTaGTCTTTACTGCACAGCACAGCTTGCTCGTCTTTATCACCACGA | + |
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Preference number: 6 (lower is better) Translates to: KSNILEVSAIFKSYV*SLLHSTACSSLSPR Trigger: TCGTGGTGATAAAGACGAGCAAGCTGTGCTGTGCAGTAAAGACAAAACATACGACTTGAAGATAGCAGACACTTCCAATATGTTGCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000313655.5 ENST00000521795.1 |
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| CDS GCA 72 bp | ACAACCAGGAATGAAAAGCAACATATTGGAAGTGTCTaGTATCTTCAAGTCGTATGTTTTGTCTTTACTGCA | + |
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Preference number: 6 (lower is better) Translates to: TTRNEKQHIGSV*YLQVVCFVFTA Trigger: TGCAGTAAAGACAAAACATACGACTTGAAGATAGCAGACACTTCCAATATGTTGCTTTTCATTCCTGGTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000313655.5 ENST00000521795.1 |
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| CDS TCA 72 bp | TTCTCCCTTAGAGAGAAAAGGCTATTAAAACGTTCCTaGTTATCCTCAGGTAAATCATCTACTTTCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: FSLREKRLLKRS*LSSGKSSTFSK Trigger: TTTGCTGAAAGTAGATGATTTACCTGAGGATAATCAGGAACGTTTTAATAGCCTTTTCTCTCTAAGGGAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313655.5 |
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| CDS TCA 72 bp | TTTATAAATCAGAGTACAGAAAAGAGCACCTCAGTGTaGATAATGTTACAGTGTGAATCTTCCTTCTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: FINQSTEKSTSV*IMLQCESSFFN Trigger: GTTGAAGAAGGAAGATTCACACTGTAACATTATTCACACTGAGGTGCTCTTTTCTGTACTCTGATTTATAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521795.1 |
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