RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DSC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000134755

Ensembl transcript IDs: ENST00000251081.8, ENST00000280904.11, ENST00000648081.1, ENST00000682357.1

Found 692 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTCGTCTCTACCCTCATCTCCCATCCCTGATTCACAGGCCCCTCTaGAGCTCCTGGCCGCCACAGTCAGTGAGCATTACCTGTTACCCC +
Preference number: 1 (lower is better)
Translates to: SRLYPHLPSLIHRPL*SSWPPQSVSITCYP
Trigger: GGGGTAACAGGTAATGCTCACTGACTGTGGCGGCCAGGAGCTTCAGAGGGGCCTGTGAATCAGGGATGGGAGATGAGGGTAGAGACGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 90 bp AGCTCCTGGCCGCCACAGTCAGTGAGCATTACCTGTTACCCCACCTaGCACAGGTCCCCACACAACAGCACAGTGATGCCAAACAGTTGC +
Preference number: 1 (lower is better)
Translates to: SSWPPQSVSITCYPT*HRSPHNSTVMPNSC
Trigger: GCAACTGTTTGGCATCACTGTGCTGTTGTGTGGGGACCTGTGTCAGGTGGGGTAACAGGTAATGCTCACTGACTGTGGCGGCCAGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 90 bp TTACCTGTTACCCCACCTGACACAGGTCCCCACACAACAGCACAGTaGTGCCAAACAGTTGCTGCCTTCTGGACAGTCACTTGTTCCACC +
Preference number: 1 (lower is better)
Translates to: LPVTPPDTGPHTTAQ*CQTVAAFWTVTCST
Trigger: GGTGGAACAAGTGACTGTCCAGAAGGCAGCAACTGTTTGGCATCACTGTGCTGTTGTGTGGGGACCTGTGTCAGGTGGGGTAACAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 90 bp GGAGTTTTCCAATTGGCCCTGTTCCCAGGGGAACACTCCTTAAGCTaGAAAGTCTCGTCTCTACCCTCATCTCCCATCCCTGATTCACAG +
Preference number: 1 (lower is better)
Translates to: GVFQLALFPGEHSLS*KVSSLPSSPIPDSQ
Trigger: CTGTGAATCAGGGATGGGAGATGAGGGTAGAGACGAGACTTTTCAGCTTAAGGAGTGTTCCCCTGGGAACAGGGCCAATTGGAAAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CCA 90 bp GCCGGAATTTGCATCAAGACACTCTTACTTGGAAGTCTTAGCACTTaGGGTTACTATGACGACTGCCAAACAGCCATGACCTCCCAGGCA +
Preference number: 1 (lower is better)
Translates to: AGICIKTLLLGSLST*GYYDDCQTAMTSQA
Trigger: TGCCTGGGAGGTCATGGCTGTTTGGCAGTCGTCATAGTAACCCCAAGTGCTAAGACTTCCAAGTAAGAGTGTCTTGATGCAAATTCCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 90 bp CAAAGGCCATCACTGGTGAAATACTGGTCGGGCTTCTGGGAAAGGTaGATAAGAGCATCATGGCAAGATGTCAGCAGTAAAGCAGAGTGG +
Preference number: 1 (lower is better)
Translates to: QRPSLVKYWSGFWER*IRASWQDVSSKAEW
Trigger: CCACTCTGCTTTACTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAGTATTTCACCAGTGATGGCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR GCA 90 bp ATTACCAGGAGCCCCCAGACACACACTGCATGGAACAGAAGATCTTaGTGCTTTTCATTTGCTGAAGAAGCACCAGCCATTTCTTCGGGA +
Preference number: 1 (lower is better)
Translates to: ITRSPQTHTAWNRRS*CFSFAEEAPAISSG
Trigger: TCCCGAAGAAATGGCTGGTGCTTCTTCAGCAAATGAAAAGCAGCAAGATCTTCTGTTCCATGCAGTGTGTGTCTGGGGGCTCCTGGTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR GCA 90 bp TTGAGCTGGCCTGAACCACAATATTCAGACACTACCCCTTCTGTCTaGCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAA +
Preference number: 1 (lower is better)
Translates to: LSWPEPQYSDTTPSV*PSHYPKGEGIPKSQ
Trigger: TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGGGGTAGTGTCTGAATATTGTGGTTCAGGCCAGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 90 bp ACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGCTGGCCTaGACCACAATATTCAGACACTACCCCTTCTGTCTGCCCCTCTCA +
Preference number: 1 (lower is better)
Translates to: TSRFVQLLVVGFELA*TTIFRHYPFCLPLS
Trigger: TGAGAGGGGCAGACAGAAGGGGTAGTGTCTGAATATTGTGGTTCAGGCCAGCTCAAATCCTACCACCAATAATTGCACGAACCTACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CCA 90 bp ATCCACCGTGTCTTGACTTGCATTCAAGTGTGTGGGTGGGGAGAGTaGCTGATTCATCTTGCACTTTCTCATAGAAGCACAGTCCTTCTA +
Preference number: 1 (lower is better)
Translates to: IHRVLTCIQVCGWGE*LIHLALSHRSTVLL
Trigger: TAGAAGGACTGTGCTTCTATGAGAAAGTGCAAGATGAATCAGCCACTCTCCCCACCCACACACTTGAATGCAAGTCAAGACACGGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 90 bp TTGCTGAATACCACAAATGAGAGACCTGGAAGCTACTATGAGCCATaGAATTCCCAAAGGCCATCACTGGTGAAATACTGGTCGGGCTTC +
Preference number: 1 (lower is better)
Translates to: LLNTTNERPGSYYEP*NSQRPSLVKYWSGF
Trigger: GAAGCCCGACCAGTATTTCACCAGTGATGGCCTTTGGGAATTTCATGGCTCATAGTAGCTTCCAGGTCTCTCATTTGTGGTATTCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR GCA 90 bp CAAAGGGAAGAGAGAATGAAACAAAACAGCCCTTGCCATTTCCCATaGACCAACTATCACTCCATACGGAGGCACATCAGTGAGTATCTC +
Preference number: 1 (lower is better)
Translates to: QREERMKQNSPCHFP*TNYHSIRRHISEYL
Trigger: GAGATACTCACTGATGTGCCTCCGTATGGAGTGATAGTTGGTGCATGGGAAATGGCAAGGGCTGTTTTGTTTCATTCTCTCTTCCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR GCA 90 bp AAGGGACCCAAAGTTCAGGCTCTATCCCAGACCGCTCTGTTAGGTTaGATGGAGAATGCGATGCATTGTGCAAAGATTAACTGTGATTGT +
Preference number: 1 (lower is better)
Translates to: KGPKVQALSQTALLG*MENAMHCAKINCDC
Trigger: ACAATCACAGTTAATCTTTGCACAATGCATCGCATTCTCCATGCAACCTAACAGAGCGGTCTGGGATAGAGCCTGAACTTTGGGTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CCA 90 bp TGGTCAAGAAGACAGAGGAGAACCCTTGGGGGTTACATTTCAATATaGGGCAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGG +
Preference number: 1 (lower is better)
Translates to: WSRRQRRTLGGYISI*GNYWWLQVGSCNYW
Trigger: CCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCTCTGTCTTCTTGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CCA 90 bp CTACATGTTAGGCATACAGTGGTCAAGAAGACAGAGGAGAACCCTTaGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAAGT +
Preference number: 1 (lower is better)
Translates to: LHVRHTVVKKTEENP*GLHFNMGQLLVATS
Trigger: ACTTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCTCTGTCTTCTTGACCACTGTATGCCTAACATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 90 bp GGCAATCCCATACGAATGCCTCAGCAATCTTTGCACTACGTATTCTaGAAAACTGAACATACAAGACCCAGTCATCAGGTGATCATTATG +
Preference number: 1 (lower is better)
Translates to: GNPIRMPQQSLHYVF*KTEHTRPSHQVIIM
Trigger: CATAATGATCACCTGATGACTGGGTCTTGTATGTTCAGTTTTTCAGAATACGTAGTGCAAAGATTGCTGAGGCATTCGTATGGGATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 90 bp GACACACACTGCATGGAACAGAAGATCTTGCTGCTTTTCATTTGCTaGAGAAGCACCAGCCATTTCTTCGGGAAACTCTTTATGATTTTG +
Preference number: 1 (lower is better)
Translates to: DTHCMEQKILLLFIC*RSTSHFFGKLFMIL
Trigger: CAAAATCATAAAGAGTTTCCCGAAGAAATGGCTGGTGCTTCTTCAGCAAATGAAAAGCAGCAAGATCTTCTGTTCCATGCAGTGTGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR GCA 90 bp AGTGTTTCAAACCAGGCAATCCCATACGAATGCCTCAGCAATCTTTaGACTACGTATTCTGAAAAACTGAACATACAAGACCCAGTCATC +
Preference number: 1 (lower is better)
Translates to: SVSNQAIPYECLSNL*TTYSEKLNIQDPVI
Trigger: GATGACTGGGTCTTGTATGTTCAGTTTTTCAGAATACGTAGTGCAAAGATTGCTGAGGCATTCGTATGGGATTGCCTGGTTTGAAACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CCA 90 bp ACCAAATATATTCAGTGTCTACTGCTCTACATGTTAGGCATACAGTaGTCAAGAAGACAGAGGAGAACCCTTGGGGGTTACATTTCAATA +
Preference number: 1 (lower is better)
Translates to: TKYIQCLLLYMLGIQ*SRRQRRTLGGYISI
Trigger: TATTGAAATGTAACCCCCAAGGGTTCTCCTCTGTCTTCTTGACCACTGTATGCCTAACATGTAGAGCAGTAGACACTGAATATATTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR GCA 90 bp ACCTTACAGTTTCACAGTGTTTCAAACCAGGCAATCCCATACGAATaGCTCAGCAATCTTTGCACTACGTATTCTGAAAAACTGAACATA +
Preference number: 1 (lower is better)
Translates to: TLQFHSVSNQAIPYE*LSNLCTTYSEKLNI
Trigger: TATGTTCAGTTTTTCAGAATACGTAGTGCAAAGATTGCTGAGGCATTCGTATGGGATTGCCTGGTTTGAAACACTGTGAAACTGTAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 90 bp AAGAGCTGTAGGTTTATACGGATATCAGGTAACTTCTTAGGGCTTTaGATATTTAAGGAGGTGAAAAACAAGATGATTCTAGGCACAAAG +
Preference number: 1 (lower is better)
Translates to: KSCRFIRISGNFLGL*IFKEVKNKMILGTK
Trigger: CTTTGTGCCTAGAATCATCTTGTTTTTCACCTCCTTAAATATTCAAAGCCCTAAGAAGTTACCTGATATCCGTATAAACCTACAGCTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 90 bp AAGGGATTCCAAAATCTCAACACTTCACTTTCCTGTATTAAGCTGTaGATGCAAACAATTGTTCTAGTCATTCAATGTCTTCTGAGGAAA +
Preference number: 1 (lower is better)
Translates to: KGFQNLNTSLSCIKL*MQTIVLVIQCLLRK
Trigger: TTTCCTCAGAAGACATTGAATGACTAGAACAATTGTTTGCATTCACAGCTTAATACAGGAAAGTGAAGTGTTGAGATTTTGGAATCCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 90 bp ATGATATTCCATCATCATATCACAATAGTGATAGCTGCTGGTTATTaGTATACTGATGAGCCAAGCAGTAAGCTAGGATCTTTATGTGAA +
Preference number: 1 (lower is better)
Translates to: MIFHHHITIVIAAGY*YTDEPSSKLGSLCE
Trigger: TTCACATAAAGATCCTAGCTTACTGCTTGGCTCATCAGTATATCAATAACCAGCAGCTATCACTATTGTGATATGATGATGGAATATCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CAA 90 bp CACCTGACACAGGTCCCCACACAACAGCACAGTGATGCCAAACAGTaGCTGCCTTCTGGACAGTCACTTGTTCCACCTGCTGTTGACCTT +
Preference number: 2 (lower is better)
Translates to: HLTQVPTQQHSDAKQ*LPSGQSLVPPAVDL
Trigger: AAGGTCAACAGCAGGTGGAACAAGTGACTGTCCAGAAGGCAGCAACTGTTTGGCATCACTGTGCTGTTGTGTGGGGACCTGTGTCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTATTCACAGGCCCCTCTaGAGCTCCTGGCCGCCACAG +
Preference number: 2 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLIHRPL*SSWPPQ
Trigger: CTGTGGCGGCCAGGAGCTTCAGAGGGGCCTGTGAAT...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCGGCTCGCAGGGGAGCTaGTATAAGAGCTGTAGGTTT +
Preference number: 2 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFGSQGS*YKSCRF
Trigger: AAACCTACAGCTCTTATATCAGCTCCCCTGCGAGCC...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTAGGCAGAGGTTGCAGTaGGCCATGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTRQRLQ*AMIMPL
Trigger: CAGTGGCATGATCATGGCTCACTGCAACCTCTGCCT...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGACTACCCCTTCTGTCTaGCCCTCTCACTATCCCAAG +
Preference number: 2 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWETTPSV*PSHYPK
Trigger: CTTGGGATAGTGAGAGGGGCAGACAGAAGGGGTAGT...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CAA 90 bp GTTTTACAGGCATTAGCCCACTCCTTACATCCACCGTGTCTTGACTaGCATTCAAGTGTGTGGGTGGGGAGAGTGGCTGATTCATCTTGC +
Preference number: 2 (lower is better)
Translates to: VLQALAHSLHPPCLD*HSSVWVGRVADSSC
Trigger: GCAAGATGAATCAGCCACTCTCCCCACCCACACACTTGAATGCAAGTCAAGACACGGTGGATGTAAGGAGTGGGCTAATGCCTGTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGACTGCCAAACAGCCATaGCCTCCCAGGCAAGTGACT +
Preference number: 2 (lower is better)
Translates to: GDKREARSQSQIWQNRIGTAKQP*PPRQVT
Trigger: AGTCACTTGCCTGGGAGGTCATGGCTGTTTGGCAGT...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGAAAGGCCATCACTGGTaGAATACTGGTCGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEKGHHW*NTGRAS
Trigger: AGAAGCCCGACCAGTATTTCACCAGTGATGGCCTTT...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTGGCTCGCAGGGGAGCTaGTATAAGAGCTGTAGGTTT +
Preference number: 2 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTGSQGS*YKSCRF
Trigger: AAACCTACAGCTCTTATATCAGCTCCCCTGCGAGCC...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCCACCGTGTCTTGACTTaGATTCAAGTGTGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFHRVLT*IQVCGW
Trigger: CCACCCACACACTTGAATGCAAGTCAAGACACGGTG...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGGGAGTGCCTTTTAGGTaGACCGCTCTGTATGACTCT +
Preference number: 2 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEGVPFR*TALYDS
Trigger: AGAGTCATACAGAGCGGTCCACCTAAAAGGCACTCC...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGACCTCCCAGGCAAGTaGCTGCTAATGTCTAGCTGG +
Preference number: 2 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLDLPGK*LLMSSW
Trigger: CCAGCTAGACATTAGCAGTCACTTGCCTGGGAGGTC...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAGGCTTCTGGGAAAGGTaGATAAGAGCATCATGGCAA +
Preference number: 2 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQGFWER*IRASWQ
Trigger: TTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCC...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAACATCCACCGTGTCTTaGCTTGCATTCAAGTGTGTG +
Preference number: 2 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQTSTVS*LAFKCV
Trigger: CACACACTTGAATGCAAGTCAAGACACGGTGGATGT...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTCTCTCAGGGCACACATaGGCACGGTGGTTTCCTGTT +
Preference number: 2 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLLSGHT*ARWFPV
Trigger: AACAGGAAACCACCGTGCTCATGTGTGCCCTGAGAG...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAATCTGGAGTCCAGGAATaGAGATGGAGACAAAAGGGA +
Preference number: 2 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQSGVQE*RWRQKG
Trigger: TCCCTTTTGTCTCCATCTCCATTCCTGGACTCCAGA...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTGACCTCCCAGGCAAGTaGCTGCTAATGTCTAGCTGG +
Preference number: 2 (lower is better)
Translates to: STLLSTGPISKETKHRKLDLPGK*LLMSSW
Trigger: CCAGCTAGACATTAGCAGTCACTTGCCTGGGAGGTC...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAAGCTACTATGAGCCATaGAATTCCCAAAGGCCATCA +
Preference number: 2 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQSYYEP*NSQRPS
Trigger: TGATGGCCTTTGGGAATTTCATGGCTCATAGTAGCT...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGAGCTACTATGAGCCATaGAATTCCCAAAGGCCATCA +
Preference number: 2 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWESYYEP*NSQRPS
Trigger: TGATGGCCTTTGGGAATTTCATGGCTCATAGTAGCT...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGGCTGAATACCACAAATaGGAGACCTGGAAGCTACTA +
Preference number: 2 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEAEYHK*ETWKLL
Trigger: TAGTAGCTTCCAGGTCTCTCATTTGTGGTATTCAGC...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACTGCTTTTCATTTGCTaGAGAAGCACCAGCCATTTC +
Preference number: 2 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQLLFIC*RSTSHF
Trigger: GAAATGGCTGGTGCTTCTTCAGCAAATGAAAAGCAG...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGGCAATCCCATACGAATaGCTCAGCAATCTTTGCACT +
Preference number: 2 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEAIPYE*LSNLCT
Trigger: AGTGCAAAGATTGCTGAGGCATTCGTATGGGATTGC...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGGTAATAGTCAATGCCTaGCTAGAAATCTCCCTTTGC +
Preference number: 2 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQVIVNA*LEISLC
Trigger: GCAAAGGGAGATTTCTAGCCAGGCATTGACTATTAC...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGTCAAGCCTAAGTAAGTaGAAGAAGGGCACCATTGTG +
Preference number: 2 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWESSLSK*KKGTIV
Trigger: CACAATGGTGCCCTTCTTCCACTTACTTAGGCTTGA...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGAGCCAAGGAAGGGATTaGCAGGGAGAATCTAAAATA +
Preference number: 2 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWESQGRD*QGESKI
Trigger: TATTTTAGATTCTCCCTGTCAATCCCTTCCTTGGCT...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTCACAGAAAGCTTAAGTaGCTTCTCAAATCCCACAGC +
Preference number: 2 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTHRKLK*LLKSHS
Trigger: GCTGTGGGATTTGAGAAGTCACTTAAGCTTTCTGTG...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAATCGGGAAACTCTTTATaGTTTTGCCTCCTCGAGAAT +
Preference number: 2 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQSGNSL*FCLLEN
Trigger: ATTCTCGAGGAGGCAAAATCATAAAGAGTTTCCCGA...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCAGGCAGAGGTTGCAGTaGGCCATGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTRQRLQ*AMIMPL
Trigger: CAGTGGCATGATCATGGCTCACTGCAACCTCTGCCT...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGTATTATTATCAGGAGTaGCTTTTAGGTGGACCGCTC +
Preference number: 2 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEYYYQE*LLGGPL
Trigger: GAGCGGTCCACCTAAAAGGCACTCCTGATAATAATA...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAACCCCCAGACACACACTaGATGGAACAGAAGATCTTG +
Preference number: 2 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQPPDTH*MEQKIL
Trigger: CAAGATCTTCTGTTCCATGCAGTGTGTGTCTGGGGG...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCGGAGTGCCTTTTAGGTaGACCGCTCTGTATGACTCT +
Preference number: 2 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLGVPFR*TALYDS
Trigger: AGAGTCATACAGAGCGGTCCACCTAAAAGGCACTCC...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CAA 90 bp CAGCTAGTAAGGATAGAGCCGGAATTTGCATCAAGACACTCTTACTaGGAAGTCTTAGCACTTGGGGTTACTATGACGACTGCCAAACAG +
Preference number: 2 (lower is better)
Translates to: QLVRIEPEFASRHSY*EVLALGVTMTTAKQ
Trigger: CTGTTTGGCAGTCGTCATAGTAACCCCAAGTGCTAAGACTTCCAAGTAAGAGTGTCTTGATGCAAATTCCGGCTCTATCCTTACTAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CAA 90 bp AAAGGTACAGTCACAAAGGGAAGAGAGAATGAAACAAAACAGCCCTaGCCATTTCCCATGCACCAACTATCACTCCATACGGAGGCACAT +
Preference number: 2 (lower is better)
Translates to: KGTVTKGRENETKQP*PFPMHQLSLHTEAH
Trigger: ATGTGCCTCCGTATGGAGTGATAGTTGGTGCATGGGAAATGGCAAGGGCTGTTTTGTTTCATTCTCTCTTCCCTTTGTGACTGTACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGTGCCAACTCTTTTCATaGATTAACTCTGACAAAGCC +
Preference number: 2 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWECQLFS*INSDKA
Trigger: GGCTTTGTCAGAGTTAATTCATGAAAAGAGTTGGCA...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTCAAGATTTATCACACTaGCTTCTGGCTAGGGATGAA +
Preference number: 2 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTQDLSH*LLARDE
Trigger: TTCATCCCTAGCCAGAAGTCAGTGTGATAAATCTTG...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTAAGAGTGGGAACAGCTaGCATAGGGTACACCTCAAC +
Preference number: 2 (lower is better)
Translates to: KEIGEISTEGPQLKMARSKSGNS*HRVHLN
Trigger: GTTGAGGTGTACCCTATGTCAGCTGTTCCCACTCTT...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCTTAGGCAGAATGGCATaGTCATATCTGCTCTTTGAT +
Preference number: 2 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFLGRMA*SYLLFD
Trigger: ATCAAAGAGCAGATATGATCATGCCATTCTGCCTAA...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGGGCAGAAGAATTGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: QLLVATSRFVQLLVVGFEGRRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCAATTCTTCTGCC...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGGTGTTATCTTCCAAGTaGCATTATCAGTTCACAGCA +
Preference number: 2 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEVLSSK*HYQFTA
Trigger: TGCTGTGAACTGATAATGTCACTTGGAAGATAACAC...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGGAAGAGGGAAGAAATTaGAAGCATAAACACCATTGG +
Preference number: 2 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEEEGRN*KHKHHW
Trigger: CCAATGGTGTTTATGCTTCCAATTTCTTCCCTCTTC...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CAA 90 bp CCCAGACACACACTGCATGGAACAGAAGATCTTGCTGCTTTTCATTaGCTGAAGAAGCACCAGCCATTTCTTCGGGAAACTCTTTATGAT +
Preference number: 2 (lower is better)
Translates to: PRHTLHGTEDLAAFH*LKKHQPFLRETLYD
Trigger: ATCATAAAGAGTTTCCCGAAGAAATGGCTGGTGCTTCTTCAGCAAATGAAAAGCAGCAAGATCTTCTGTTCCATGCAGTGTGTGTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CAA 90 bp CCAAACAGTTGCTGCCTTCTGGACAGTCACTTGTTCCACCTGCTGTaGACCTTTCTAGTTCTATTTATCTCTGGAGATTTGGCAATTCTG +
Preference number: 2 (lower is better)
Translates to: PNSCCLLDSHLFHLL*TFLVLFISGDLAIL
Trigger: CAGAATTGCCAAATCTCCAGAGATAAATAGAACTAGAAAGGTCAACAGCAGGTGGAACAAGTGACTGTCCAGAAGGCAGCAACTGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGTCTCCCTTTGCACAGTaGAAAGGTCACATTACAAGA +
Preference number: 2 (lower is better)
Translates to: GDKREARSQSQIWQNRIGSPFAQ*KGHITR
Trigger: TCTTGTAATGTGACCTTTTCACTGTGCAAAGGGAGA...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGTGCCAGGCATTGTGTaGTGTGTTTTACAGGCATTA +
Preference number: 2 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLVPGIV*CVLQAL
Trigger: TAATGCCTGTAAAACACATCACACAATGCCTGGCAC...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAAGCAATCCCATACGAATaGCTCAGCAATCTTTGCACT +
Preference number: 2 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQAIPYE*LSNLCT
Trigger: AGTGCAAAGATTGCTGAGGCATTCGTATGGGATTGC...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGAAGAAGCAGATGTTCTaGTTTTCATCCAATTTGAAC +
Preference number: 2 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQKKQMF*FSSNLN
Trigger: GTTCAAATTGGATGAAAAGCAGAACATCTGCTTCTT...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTAACTTTACAGCCATGTaGTCTAGACACACAAATGTC +
Preference number: 2 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTNFTAM*SRHTNV
Trigger: GACATTTGTGTGTCTAGAGCACATGGCTGTAAAGTT...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCGTAATAGTCAATGCCTaGCTAGAAATCTCCCTTTGC +
Preference number: 2 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLVIVNA*LEISLC
Trigger: GCAAAGGGAGATTTCTAGCCAGGCATTGACTATTAC...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
3UTR-3UTR CCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTGGAAGTCTTAGCACTTaGGGTTACTATGACGACTGC +
Preference number: 2 (lower is better)
Translates to: STLLSTGPISKETKHRKLGSLST*GYYDDC
Trigger: GCAGTCGTCATAGTAACCCCAAGTGCTAAGACTTCC...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTTATCACACTGACTTCTaGCTAGGGATGAATAAGATG +
Preference number: 2 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTYHTDF*LGMNKM
Trigger: CATCTTATTCATCCCTAGCCAGAAGTCAGTGTGATA...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTAACCTCATGAATGCTTaGATTGGGAGTAGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLNLMNA*IGSSRS
Trigger: GCTTCTGCTACTCCCAATCCAAGCATTCATGAGGTT...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CAA 90 bp ACAGAGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATaGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTT +
Preference number: 2 (lower is better)
Translates to: TEENPWGLHFNMGQL*VATSRFVQLLVVGF
Trigger: AAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGTGCCAACTCTTTTCATaGATTAACTCTGACAAAGCC +
Preference number: 2 (lower is better)
Translates to: GDKREARSQSQIWQNRIGCQLFS*INSDKA
Trigger: GGCTTTGTCAGAGTTAATTCATGAAAAGAGTTGGCA...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAAATAGGCATGCAATTGTaGACACCTTTCTTGGTCCTT +
Preference number: 2 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQIGMQL*TPFLVL
Trigger: AAGGACCAAGAAAGGTGTTCACAATTGCATGCCTAT...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTACACTCATCTCTTCATaGATGCTTCTGCTAGTGTCC +
Preference number: 2 (lower is better)
Translates to: STLLSTGPISKETKHRKLTLISS*MLLLVS
Trigger: GGACACTAGCAGAAGCATGCATGAAGAGATGAGTGT...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251081.8
3UTR-3UTR GCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCCTAGAAATCTCCCTTTaGACAGTGAAAAGGTCACAT +
Preference number: 2 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLLEISL*TVKRSH
Trigger: ATGTGACCTTTTCACTGTGCAAAGGGAGATTTCTAG...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
3UTR-3UTR CCA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCCAGACACACACTGCATaGAACAGAAGATCTTGCTGC +
Preference number: 2 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTQTHTA*NRRSCC
Trigger: GCAGCAAGATCTTCTGTTCCATGCAGTGTGTGTCTG...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGCAGACACACACTGCATaGAACAGAAGATCTTGCTGC +
Preference number: 2 (lower is better)
Translates to: QLLVATSRFVQLLVVGFEQTHTA*NRRSCC
Trigger: GCAGCAAGATCTTCTGTTCCATGCAGTGTGTGTCTG...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTGTCAAGACTTCAATCTaGAGTCCAGGAATGGAGATG +
Preference number: 2 (lower is better)
Translates to: KEIGEISTEGPQLKMARSVKTSI*SPGMEM
Trigger: CATCTCCATTCCTGGACTCCAGATTGAAGTCTTGAC...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGATTCAAGTGTGTGGGTaGGGAGAGTGGCTGATTCAT +
Preference number: 2 (lower is better)
Translates to: QLLVATSRFVQLLVVGFEIQVCG*GEWLIH
Trigger: ATGAATCAGCCACTCTCCCCACCCACACACTTGAAT...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTTCTCCCTTTGCACAGTaGAAAGGTCACATTACAAGA +
Preference number: 2 (lower is better)
Translates to: KEIGEISTEGPQLKMARSSPFAQ*KGHITR
Trigger: TCTTGTAATGTGACCTTTTCACTGTGCAAAGGGAGA...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCCCCAATCTTGTGAATTaGAGACAGGCACATTATAGA +
Preference number: 2 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLPNLVN*RQAHYR
Trigger: TCTATAATGTGCCTGTCTTCAATTCACAAGATTGGG...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAGGCTTCTGGGAAAGGTaGATAAGAGCATCATGGCAA +
Preference number: 2 (lower is better)
Translates to: KFEVSVISQGNTARTKLRGFWER*IRASWQ
Trigger: TTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCC...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTTATGCACTTACTATGTaGCAGGCATTGTGTGATGTG +
Preference number: 2 (lower is better)
Translates to: KEIGEISTEGPQLKMARSYALTM*QALCDV
Trigger: CACATCACACAATGCCTGGCACATAGTAAGTGCATA...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTGTAATAGTCAATGCCTaGCTAGAAATCTCCCTTTGC +
Preference number: 2 (lower is better)
Translates to: KEIGEISTEGPQLKMARSVIVNA*LEISLC
Trigger: GCAAAGGGAGATTTCTAGCCAGGCATTGACTATTAC...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAGGAAGTCTTAGCACTTaGGGTTACTATGACGACTGC +
Preference number: 2 (lower is better)
Translates to: KFEVSVISQGNTARTKLRGSLST*GYYDDC
Trigger: GCAGTCGTCATAGTAACCCCAAGTGCTAAGACTTCC...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAAAGCAGTAAAGCAGAGTaGAGACTGAAGCTAAATTGT +
Preference number: 2 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQSSKAE*RLKLNC
Trigger: ACAATTTAGCTTCAGTCTCCACTCTGCTTTACTGCT...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTCGTATTCTGAAAAACTaGACATACAAGACCCAGTCA +
Preference number: 2 (lower is better)
Translates to: KEIGEISTEGPQLKMARSRILKN*TYKTQS
Trigger: TGACTGGGTCTTGTATGTTCAGTTTTTCAGAATACG...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGTCGGGAAACTCTTTATaGTTTTGCCTCCTCGAGAAT +
Preference number: 2 (lower is better)
Translates to: QLLVATSRFVQLLVVGFESGNSL*FCLLEN
Trigger: ATTCTCGAGGAGGCAAAATCATAAAGAGTTTCCCGA...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTTGGGAAGGCATCAAATaGCTACAGTACAAACAAAGT +
Preference number: 2 (lower is better)
Translates to: KEIGEISTEGPQLKMARSWEGIK*LQYKQS
Trigger: ACTTTGTTTGTACTGTAGTCATTTGATGCCTTCCCA...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTCTAGAAATCTCCCTTTaGACAGTGAAAAGGTCACAT +
Preference number: 2 (lower is better)
Translates to: KEIGEISTEGPQLKMARSLEISL*TVKRSH
Trigger: ATGTGACCTTTTCACTGTGCAAAGGGAGATTTCTAG...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTAATTGTAATAGTCAATaGCTGGCTAGAAATCTCCCT +
Preference number: 2 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLNCNSQ*LARNLP
Trigger: AGGGAGATTTCTAGCCAGGCATTGACTATTACAATT...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAAGGTTACTATGACGACTaGCAAACAGCCATGACCTCC +
Preference number: 2 (lower is better)
Translates to: RFGKTELGSKIKTVLRWEGYYDD*QTAMTS
Trigger: GGAGGTCATGGCTGTTTGGCAGTCGTCATAGTAACC...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAATGGAACAGAAGATCTTaGTGCTTTTCATTTGCTGAA +
Preference number: 2 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQWNRRS*CFSFAE
Trigger: TTCAGCAAATGAAAAGCAGCAAGATCTTCTGTTCCA...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGACCTTGCCATTTCCCATaGACCAACTATCACTCCATA +
Preference number: 2 (lower is better)
Translates to: KFEVSVISQGNTARTKLRPCHFP*TNYHSI
Trigger: TATGGAGTGATAGTTGGTGCATGGGAAATGGCAAGG...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATCTCCCTTTGCACAGTaGAAAGGTCACATTACAAGA +
Preference number: 2 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILSPFAQ*KGHITR
Trigger: TCTTGTAATGTGACCTTTTCACTGTGCAAAGGGAGA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
3UTR-3UTR TCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGCCCAATCTTGTGAATTaGAGACAGGCACATTATAGA +
Preference number: 2 (lower is better)
Translates to: QLLVATSRFVQLLVVGFEPNLVN*RQAHYR
Trigger: TCTATAATGTGCCTGTCTTCAATTCACAAGATTGGG...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTGCTTTTCATCCAATTTaGACCTTACAGTTTCACAGT +
Preference number: 2 (lower is better)
Translates to: STLLSTGPISKETKHRKLAFHPI*TLQFHS
Trigger: ACTGTGAAACTGTAAGGTTCAAATTGGATGAAAAGC...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGACACTCACTAGTGTCCTaGAGTTCTTTCACATCATCT +
Preference number: 2 (lower is better)
Translates to: KFEVSVISQGNTARTKLRHSLVS*SSFTSS
Trigger: AGATGATGTGAAAGAACTTCAGGACACTAGTGAGTG...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR TCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAATAGGCATGCAATTGTaGACACCTTTCTTGGTCCTT +
Preference number: 2 (lower is better)
Translates to: KFEVSVISQGNTARTKLRIGMQL*TPFLVL
Trigger: AAGGACCAAGAAAGGTGTTCACAATTGCATGCCTAT...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTAAGAAGCAGATGTTCTaGTTTTCATCCAATTTGAAC +
Preference number: 2 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLKKQMF*FSSNLN
Trigger: GTTCAAATTGGATGAAAAGCAGAACATCTGCTTCTT...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGATGGCATGATCATATCTaGTCTTTGATGGCCCTTGAA +
Preference number: 2 (lower is better)
Translates to: KFEVSVISQGNTARTKLRWHDHI*SLMALE
Trigger: TTCAAGGGCCATCAAAGAGCAGATATGATCATGCCA...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAGGCTTGAGAAGAATATaGTCCAAATCCATGACACAG +
Preference number: 2 (lower is better)
Translates to: KFEVSVISQGNTARTKLRGLRRI*SKSMTQ
Trigger: CTGTGTCATGGATTTGGAGCATATTCTTCTCAAGCC...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGATCTCCCAGCCTAACATaGAAAAAGCTCGTAGATGTA +
Preference number: 2 (lower is better)
Translates to: KFEVSVISQGNTARTKLRSPSLT*KKLVDV
Trigger: TACATCTACGAGCTTTTTCCATGTTAGGCTGGGAGA...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTTTAGGATATACCAAATaGCTTGAGAAGAATATGCTC +
Preference number: 2 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLLGYTK*LEKNML
Trigger: GAGCATATTCTTCTCAAGCCATTTGGTATATCCTAA...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAGGTTACATTTCAATATaGGGCAATTATTGGTGGCTA +
Preference number: 2 (lower is better)
Translates to: KFEVSVISQGNTARTKLRGYISI*GNYWWL
Trigger: TAGCCACCAATAATTGCCCCATATTGAAATGTAACC...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR GCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAAAATTGTAATAGTCAATaGCTGGCTAGAAATCTCCCT +
Preference number: 2 (lower is better)
Translates to: RFGKTELGSKIKTVLRWENCNSQ*LARNLP
Trigger: AGGGAGATTTCTAGCCAGGCATTGACTATTACAATT...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 72 bp ACAGGCCCCTCTGAAGCTCCTGGCCGCCACAGTCAGTaGGCATTACCTGTTACCCCACCTGACACAGGTCCC +
Preference number: 3 (lower is better)
Translates to: TGPSEAPGRHSQ*ALPVTPPDTGP
Trigger: GGGACCTGTGTCAGGTGGGGTAACAGGTAATGCTCACTGACTGTGGCGGCCAGGAGCTTCAGAGGGGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 72 bp CAGGTTACACAGATGGTTTGTGGTAGAGCCCAGATCTaGACCTTGCCTGTTGGGCCCCAAGGGACCCAAAGT +
Preference number: 3 (lower is better)
Translates to: QVTQMVCGRAQI*TLPVGPQGTQS
Trigger: ACTTTGGGTCCCTTGGGGCCCAACAGGCAAGGTTCAGATCTGGGCTCTACCACAAACCATCTGTGTAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 72 bp CAATTGGCCCTGTTCCCAGGGGAACACTCCTTAAGCTaGAAAGTCTCGTCTCTACCCTCATCTCCCATCCCT +
Preference number: 3 (lower is better)
Translates to: QLALFPGEHSLS*KVSSLPSSPIP
Trigger: AGGGATGGGAGATGAGGGTAGAGACGAGACTTTTCAGCTTAAGGAGTGTTCCCCTGGGAACAGGGCCAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR GCA 72 bp CTTGGAAGTCTTAGCACTTGGGGTTACTATGACGACTaGCAAACAGCCATGACCTCCCAGGCAAGTGACTGC +
Preference number: 3 (lower is better)
Translates to: LGSLSTWGYYDD*QTAMTSQASDC
Trigger: GCAGTCACTTGCCTGGGAGGTCATGGCTGTTTGGCAGTCGTCATAGTAACCCCAAGTGCTAAGACTTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR GCA 72 bp TCCCCACACAACAGCACAGTGATGCCAAACAGTTGCTaGCTTCTGGACAGTCACTTGTTCCACCTGCTGTTG +
Preference number: 3 (lower is better)
Translates to: SPHNSTVMPNSC*LLDSHLFHLLL
Trigger: CAACAGCAGGTGGAACAAGTGACTGTCCAGAAGGCAGCAACTGTTTGGCATCACTGTGCTGTTGTGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR GCA 72 bp GCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTaGCTGGGAGTTTTCCAATTGGCCCTGTTCCCAGGG +
Preference number: 3 (lower is better)
Translates to: ASHSLLVNSCPW*LGVFQLALFPG
Trigger: CCCTGGGAACAGGGCCAATTGGAAAACTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACCACCGTGTCTTGACTaGCATTCAAGTGTGTGGGTG +
Preference number: 3 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQPPCLD*HSSVWV
Trigger: CACCCACACACTTGAATGCAAGTCAAGACACGGTGG...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 72 bp GTGGGAACAGCTGACATAGGGTACACCTCAACCTCATaGATGCTTGGATTGGGAGTAGCAGAAGCAGAAGTT +
Preference number: 3 (lower is better)
Translates to: VGTADIGYTSTS*MLGLGVAEAEV
Trigger: AACTTCTGCTTCTGCTACTCCCAATCCAAGCATTCATGAGGTTGAGGTGTACCCTATGTCAGCTGTTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR GCA 72 bp AGCCCCCAGACACACACTGCATGGAACAGAAGATCTTaGTGCTTTTCATTTGCTGAAGAAGCACCAGCCATT +
Preference number: 3 (lower is better)
Translates to: SPQTHTAWNRRS*CFSFAEEAPAI
Trigger: AATGGCTGGTGCTTCTTCAGCAAATGAAAAGCAGCAAGATCTTCTGTTCCATGCAGTGTGTGTCTGGGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCTACATCCACCGTGTCTaGACTTGCATTCAAGTGTGT +
Preference number: 3 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFYIHRV*TCIQVC
Trigger: ACACACTTGAATGCAAGTCAAGACACGGTGGATGTA...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTCTTCTGGACAGTCACTaGTTCCACCTGCTGTTGACC +
Preference number: 3 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLLLDSH*FHLLLT
Trigger: GGTCAACAGCAGGTGGAACAAGTGACTGTCCAGAAG...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCAAGCCCATCTTCTTCTaGTCGTTCACTGCAACAACC +
Preference number: 3 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLKPIFF*SFTATT
Trigger: GGTTGTTGCAGTGAACGACAAGAAGAAGATGGGCTT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251081.8
3UTR-3UTR CAA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTACTATGTGCCAGGCATaGTGTGATGTGTTTTACAGG +
Preference number: 3 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTTMCQA*CDVFYR
Trigger: CCTGTAAAACACATCACACAATGCCTGGCACATAGT...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CCA 72 bp TGCATCAAGACACTCTTACTTGGAAGTCTTAGCACTTaGGGTTACTATGACGACTGCCAAACAGCCATGACC +
Preference number: 3 (lower is better)
Translates to: CIKTLLLGSLST*GYYDDCQTAMT
Trigger: GGTCATGGCTGTTTGGCAGTCGTCATAGTAACCCCAAGTGCTAAGACTTCCAAGTAAGAGTGTCTTGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CCA 72 bp GTCTTGACTTGCATTCAAGTGTGTGGGTGGGGAGAGTaGCTGATTCATCTTGCACTTTCTCATAGAAGCACA +
Preference number: 3 (lower is better)
Translates to: VLTCIQVCGWGE*LIHLALSHRST
Trigger: TGTGCTTCTATGAGAAAGTGCAAGATGAATCAGCCACTCTCCCCACCCACACACTTGAATGCAAGTCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CCA 72 bp ATTCAGTGTCTACTGCTCTACATGTTAGGCATACAGTaGTCAAGAAGACAGAGGAGAACCCTTGGGGGTTAC +
Preference number: 3 (lower is better)
Translates to: IQCLLLYMLGIQ*SRRQRRTLGGY
Trigger: GTAACCCCCAAGGGTTCTCCTCTGTCTTCTTGACCACTGTATGCCTAACATGTAGAGCAGTAGACACTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGTCTGTAAATGTGCATTaGACCAAAGAGATTCCATCC +
Preference number: 3 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWESVNVH*TKEIPS
Trigger: GGATGGAATCTCTTTGGTCAAATGCACATTTACAGA...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 72 bp TCACTGGTGAAATACTGGTCGGGCTTCTGGGAAAGGTaGATAAGAGCATCATGGCAAGATGTCAGCAGTAAA +
Preference number: 3 (lower is better)
Translates to: SLVKYWSGFWER*IRASWQDVSSK
Trigger: TTTACTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAGTATTTCACCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 72 bp TTCGTGCAATTATTGGTGGTAGGATTTGAGCTGGCCTaGACCACAATATTCAGACACTACCCCTTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: FVQLLVVGFELA*TTIFRHYPFCL
Trigger: CAGACAGAAGGGGTAGTGTCTGAATATTGTGGTTCAGGCCAGCTCAAATCCTACCACCAATAATTGCACGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR GCA 72 bp AAAGTTCAGGCTCTATCCCAGACCGCTCTGTTAGGTTaGATGGAGAATGCGATGCATTGTGCAAAGATTAAC +
Preference number: 3 (lower is better)
Translates to: KVQALSQTALLG*MENAMHCAKIN
Trigger: GTTAATCTTTGCACAATGCATCGCATTCTCCATGCAACCTAACAGAGCGGTCTGGGATAGAGCCTGAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAAGCTAGAAATCTCCCTTaGCACAGTGAAAAGGTCACA +
Preference number: 3 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQARNLP*HSEKVT
Trigger: TGTGACCTTTTCACTGTGCAAAGGGAGATTTCTAGC...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 72 bp ATATTGATCAGGAATGAAGTGAAGAGTGGGAACAGCTaGCATAGGGTACACCTCAACCTCATGAATGCTTGG +
Preference number: 3 (lower is better)
Translates to: ILIRNEVKSGNS*HRVHLNLMNAW
Trigger: CCAAGCATTCATGAGGTTGAGGTGTACCCTATGTCAGCTGTTCCCACTCTTCACTTCATTCCTGATCAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 72 bp GGGCTGGGAACTACCTCTTACGTGTTATCTTCCAAGTaGCATTATCAGTTCACAGCACAATATAGGCATTGC +
Preference number: 3 (lower is better)
Translates to: GLGTTSYVLSSK*HYQFTAQYRHC
Trigger: GCAATGCCTATATTGTGCTGTGAACTGATAATGTCACTTGGAAGATAACACGTAAGAGGTAGTTCCCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CCA 72 bp ACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTaGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGG +
Preference number: 3 (lower is better)
Translates to: TLGGYISIWGNY*WLQVGSCNYWW
Trigger: CCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTGCTAGAAATCTCCCTTaGCACAGTGAAAAGGTCACA +
Preference number: 3 (lower is better)
Translates to: STLLSTGPISKETKHRKLARNLP*HSEKVT
Trigger: TGTGACCTTTTCACTGTGCAAAGGGAGATTTCTAGC...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCATTACACCATTCTTGTaGTTAACACAGAGCACTGCT +
Preference number: 3 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLITPFL*LTQSTA
Trigger: AGCAGTGCTCTGTGTTAACAACAAGAATGGTGTAAT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
3UTR-3UTR CAA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGCTTGCTGCTTTTCATTaGCTGAAGAAGCACCAGCCA +
Preference number: 3 (lower is better)
Translates to: QLLVATSRFVQLLVVGFELAAFH*LKKHQP
Trigger: TGGCTGGTGCTTCTTCAGCAAATGAAAAGCAGCAAG...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGTTTTCTGTGTGGCTTaGTTCTGCATTCCTACCTTA +
Preference number: 3 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLVFCVA*FCIPTL
Trigger: TAAGGTAGGAATGCAGAACAAAGCCACACAGAAAAC...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 72 bp GCAAGAACAAAGCTGAGATTTGGATCCACGTCTTTCTaGCTGCGAAGTCTGTGTGTGATCATTGTTTCCATT +
Preference number: 3 (lower is better)
Translates to: ARTKLRFGSTSF*LRSLCVIIVSI
Trigger: AATGGAAACAATGATCACACACAGACTTCGCAGTCAGAAAGACGTGGATCCAAATCTCAGCTTTGTTCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCATTACACCATTCTTGTaGTTAACACAGAGCACTGCT +
Preference number: 3 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLITPFL*LTQSTA
Trigger: AGCAGTGCTCTGTGTTAACAACAAGAATGGTGTAAT...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 72 bp ATACGAATGCCTCAGCAATCTTTGCACTACGTATTCTaGAAAACTGAACATACAAGACCCAGTCATCAGGTG +
Preference number: 3 (lower is better)
Translates to: IRMPQQSLHYVF*KTEHTRPSHQV
Trigger: CACCTGATGACTGGGTCTTGTATGTTCAGTTTTTCAGAATACGTAGTGCAAAGATTGCTGAGGCATTCGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 72 bp CATTATCAGTTCACAGCACAATATAGGCATTGCCTCTaGGGCTCATTGCTATGCATTTCTTTCCCTATTCTC +
Preference number: 3 (lower is better)
Translates to: HYQFTAQYRHCL*GSLLCISFPIL
Trigger: GAGAATAGGGAAAGAAATGCATAGCAATGAGCCTCAGAGGCAATGCCTATATTGTGCTGTGAACTGATAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGTGTCAGGACATAGTCTaGGGCATGCTTGTGATTTTC +
Preference number: 3 (lower is better)
Translates to: DVQENNSFQAPHEHLINWCQDIV*GMLVIF
Trigger: GAAAATCACAAGCATGCCCAAGACTATGTCCTGACA...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251081.8
3UTR-3UTR CAA 90 bp AAGCCACTGGCTTTCAGAGACTTATTAGAACACACTCATCTCTTCATGCATGCTGCTAGTGTCCTAAATTaGGGCTCCAAATTATCCAAA +
Preference number: 3 (lower is better)
Translates to: KPLAFRDLLEHTHLFMHAASVLN*GSKLSK
Trigger: TTTGGATAATTTGGAGCCCAAATTTAGGACACTAGC...AGCATGCATGAAGAGATGAGTGTGTTCTAATAAGTCTCTGAAAGCCAGTGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251081.8
3UTR-3UTR CAA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTATTACACCATTCTTGTaGTTAACACAGAGCACTGCT +
Preference number: 3 (lower is better)
Translates to: STLLSTGPISKETKHRKLITPFL*LTQSTA
Trigger: AGCAGTGCTCTGTGTTAACAACAAGAATGGTGTAAT...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGACACATCTTGTGTATATaGACACCCTCTGCTCCTTTC +
Preference number: 3 (lower is better)
Translates to: KFEVSVISQGNTARTKLRHILCI*TPSAPF
Trigger: GAAAGGAGCAGAGGGTGTCAATATACACAAGATGTG...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAGCTCTGTCCTCTCCCTaGAATCCTAACAAAATAAGT +
Preference number: 3 (lower is better)
Translates to: KFEVSVISQGNTARTKLRALSSP*NPNKIS
Trigger: ACTTATTTTGTTAGGATTCAAGGGAGAGGACAGAGC...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR GCA 72 bp TTTCACAGTGTTTCAAACCAGGCAATCCCATACGAATaGCTCAGCAATCTTTGCACTACGTATTCTGAAAAA +
Preference number: 3 (lower is better)
Translates to: FHSVSNQAIPYE*LSNLCTTYSEK
Trigger: TTTTTCAGAATACGTAGTGCAAAGATTGCTGAGGCATTCGTATGGGATTGCCTGGTTTGAAACACTGTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR GCA 72 bp TCTCCCAGCCTAACATGGAAAAAGCTCGTAGATGTATaGCACTTTCTTTGCTTTGTGGTTTCTCAAGATATT +
Preference number: 3 (lower is better)
Translates to: SPSLTWKKLVDV*HFLCFVVSQDI
Trigger: AATATCTTGAGAAACCACAAAGCAAAGAAAGTGGCATACATCTACGAGCTTTTTCCATGTTAGGCTGGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGATCTGTAAATGTGCATTaGACCAAAGAGATTCCATCC +
Preference number: 3 (lower is better)
Translates to: KFEVSVISQGNTARTKLRSVNVH*TKEIPS
Trigger: GGATGGAATCTCTTTGGTCAAATGCACATTTACAGA...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGCTAATTACACCATTCTaGTTGTTAACACAGAGCACT +
Preference number: 3 (lower is better)
Translates to: QLLVATSRFVQLLVVGFELITPF*LLTQST
Trigger: AGTGCTCTGTGTTAACAACAAGAATGGTGTAATTAG...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCCCTATTCTCTACTTCTaGTGTGAAGATTTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTPILYF*CEDFLL
Trigger: GAGAAGAAAATCTTCACACAAGAAGTAGAGAATAGG...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 72 bp AAAATTAATGGCCAGAGTTGTATAGGCATGCAATTGTaGACACCTTTCTTGGTCCTTAGTGTCCTACATGAA +
Preference number: 3 (lower is better)
Translates to: KINGQSCIGMQL*TPFLVLSVLHE
Trigger: TTCATGTAGGACACTAAGGACCAAGAAAGGTGTTCACAATTGCATGCCTATACAACTCTGGCCATTAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 72 bp CATCATCATATCACAATAGTGATAGCTGCTGGTTATTaGTATACTGATGAGCCAAGCAGTAAGCTAGGATCT +
Preference number: 3 (lower is better)
Translates to: HHHITIVIAAGY*YTDEPSSKLGS
Trigger: AGATCCTAGCTTACTGCTTGGCTCATCAGTATATCAATAACCAGCAGCTATCACTATTGTGATATGATGATG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGATTTGCATACATCTTCTaGACTAGCAGCATTTATGTG +
Preference number: 3 (lower is better)
Translates to: KFEVSVISQGNTARTKLRFAYIF*TSSIYV
Trigger: CACATAAATGCTGCTAGTCAAGAAGATGTATGCAAA...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR-3UTR CAA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAACTAATTACACCATTCTaGTTGTTAACACAGAGCACT +
Preference number: 3 (lower is better)
Translates to: RFGKTELGSKIKTVLRWELITPF*LLTQST
Trigger: AGTGCTCTGTGTTAACAACAAGAATGGTGTAATTAG...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR GCA 72 bp GTTAGAATTAGTGCCCATTTTAAGAAGCAGATGTTCTaGTTTTCATCCAATTTGAACCTTACAGTTTCACAG +
Preference number: 3 (lower is better)
Translates to: VRISAHFKKQMF*FSSNLNLTVSQ
Trigger: CTGTGAAACTGTAAGGTTCAAATTGGATGAAAAGCAGAACATCTGCTTCTTAAAATGGGCACTAATTCTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR TCA 72 bp ACAGAAAGAGACAGAGAGAAAGAGAGAGATGCTACTTaGCATTTTAAAGACCAAAAACTTGCAGTAGTAAAA +
Preference number: 3 (lower is better)
Translates to: TERDREKERDAT*HFKDQKLAVVK
Trigger: TTTTACTACTGCAAGTTTTTGGTCTTTAAAATGTCAAGTAGCATCTCTCTCTTTCTCTCTGTCTCTTTCTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTGGCCGGAGCGCAGTCTaGGCCCGCTGCTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTGRSAV*ARCSGG
Trigger: TCCTCCTGAGCAGCGGGCCCAGACTGCGCTCCGGCC...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCGCCGGAGGGGCGGGCTaGCTCCATGGAGAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLAGGAG*LHGEGS
Trigger: CGAGCCCTCTCCATGGAGGCAGCCCGCCCCTCCGGC...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTGCGAGGCGGAGGAGGTaGGGCGCGCGGAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLARRRR*GARRGA
Trigger: AGCACCTCTCCGCGCGCCCCACCTCCTCCGCCTCGC...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGGTGCCACAAACTCCCTaGGCAGAAGCGCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQVPQTP*AEAPTV
Trigger: AACTGTGGGCGCTTCTGCTCAGGGAGTTTGTGGCAC...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAGGTAGAGCCCAGATCTaGACCTTGCCTGTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQGRAQI*TLPVGP
Trigger: GGGCCCAACAGGCAAGGTTCAGATCTGGGCTCTACC...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCGCGAGGCGGAGGAGGTaGGGCGCGCGGAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTARRRR*GARRGA
Trigger: AGCACCTCTCCGCGCGCCCCACCTCCTCCGCCTCGC...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AAGCCACTGGCTTTCAGAGACTTATTAGAACACACTCATCTCTTCATGCATGCTGGCCGGAGCGCAGTCTaGGCCCGCTGCTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: KPLAFRDLLEHTHLFMHAGRSAV*ARCSGG
Trigger: TCCTCCTGAGCAGCGGGCCCAGACTGCGCTCCGGCC...AGCATGCATGAAGAGATGAGTGTGTTCTAATAAGTCTCTGAAAGCCAGTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251081.8
CDS-3UTR CCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTGGCGGGCTGCCTCCATaGAGAGGGCTCGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLGGLPP*RGLGAG
Trigger: ACCTGCCCCGAGCCCTCTCCATGGAGGCAGCCCGCC...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGACTGCCAAACAGCCATaGCCTCCCAGGCAAGTGACT +
Preference number: 4 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQTAKQP*PPRQVT
Trigger: AGTCACTTGCCTGGGAGGTCATGGCTGTTTGGCAGT...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGGCAGTCTGGGCCCGCTaGTCAGGAGGAGCGCGAGGC +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFEAVWAR*SGGARG
Trigger: GCCTCGCGCTCCTCCTGAGCAGCGGGCCCAGACTGC...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTACCTGTTACCCCACCTaGCACAGGTCCCCACACAAC +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTTCYPT*HRSPHN
Trigger: GTTGTGTGGGGACCTGTGTCAGGTGGGGTAACAGGT...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAATGCTGTGCTCATGGCTaGTCTTGGACTAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQCCAHG*SWTSLS
Trigger: AGAGAGGCTAGTCCAAGATCAGCCATGAGCACAGCA...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCGGTGGGGAGAGTGGCTaGTTCATCTTGCACTTTCTC +
Preference number: 4 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFGGESG*FILHFL
Trigger: GAGAAAGTGCAAGATGAATCAGCCACTCTCCCCACC...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCCACACAACAGCACAGTaGTGCCAAACAGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFHTTAQ*CQTVAA
Trigger: GGCAGCAACTGTTTGGCATCACTGTGCTGTTGTGTG...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTATTCACAGGCCCCTCTaGAGCTCCTGGCCGCCACAG +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSIHRPL*SSWPPQ
Trigger: CTGTGGCGGCCAGGAGCTTCAGAGGGGCCTGTGAAT...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGATTAACAGCCGGCCCTaGCCAGCAGAAGCCCTGACT +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGINSRP*PAEALT
Trigger: AGTCAGGGCTTCTGCTGGGCAGGGCCGGCTGTTAAT...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGTACTTCAGGCGTGTGTaGATCGTGTCAGGCTCATCT +
Preference number: 4 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQYFRRV*IVSGSS
Trigger: AGATGAGCCTGACACGATGCACACACGCCTGAAGTA...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGTCCACCGCCAATCCTTaGATCTACACGATGTGTGCA +
Preference number: 4 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQSTANP*IYTMCA
Trigger: TGCACACATCGTGTAGATCCAAGGATTGGCGGTGGA...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAAGTGCCACAAACTCCCTaGGCAGAAGCGCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQVPQTP*AEAPTV
Trigger: AACTGTGGGCGCTTCTGCTCAGGGAGTTTGTGGCAC...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAATCCGTTTTTGATTCCTaGTCCCACGGTGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQSVFDS*SHGATN
Trigger: GTTTGTGGCACCGTGGGATCAGGAATCAAAAACGGA...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAGGGGTCTTACTTCTCTaGTTCAGGGAGTGCGAAATC +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQGVLLL*FRECEI
Trigger: GATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCC...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGGACCTCCCAGGCAAGTaGCTGCTAATGTCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGDLPGK*LLMSSW
Trigger: CCAGCTAGACATTAGCAGTCACTTGCCTGGGAGGTC...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTGGTAGAGCCCAGATCTaGACCTTGCCTGTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLGRAQI*TLPVGP
Trigger: GGGCCCAACAGGCAAGGTTCAGATCTGGGCTCTACC...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCATTAACAGCCGGCCCTaGCCAGCAGAAGCCCTGACT +
Preference number: 4 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLINSRP*PAEALT
Trigger: AGTCAGGGCTTCTGCTGGGCAGGGCCGGCTGTTAAT...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAATACTTCAGGCGTGTGTaGATCGTGTCAGGCTCATCT +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQYFRRV*IVSGSS
Trigger: AGATGAGCCTGACACGATGCACACACGCCTGAAGTA...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCCCCAGATCTGAACCTTaGCTGTTGGGCCCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLPRSEP*LLGPKG
Trigger: TCCCTTGGGGCCCAACAGGCAAGGTTCAGATCTGGG...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAGGAGTGCCTTTTAGGTaGACCGCTCTGTATGACTCT +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQGVPFR*TALYDS
Trigger: AGAGTCATACAGAGCGGTCCACCTAAAAGGCACTCC...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAATTGCATTCAAGTGTGTaGGTGGGGAGAGTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQLHSSV*VGRVAD
Trigger: ATCAGCCACTCTCCCCACCCACACACTTGAATGCAA...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGTATTTTCATCAATGGTaGCCCACCCTGTTGGATCAG +
Preference number: 4 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQYFHQW*PTLLDQ
Trigger: CTGATCCAACAGGGTGGGTCACCATTGATGAAAATA...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGATTTCGATGGTCTCCTaGCCTCCGTTTTTGATTCCT +
Preference number: 4 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQISMVS*PPFLIP
Trigger: AGGAATCAAAAACGGAGGTCAGGAGACCATCGAAAT...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAGTGGACCGCTCTGTATaGCTCTCATGCTTCAAAACT +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQVDRSV*LSCFKT
Trigger: AGTTTTGAAGCATGAGAGTCATACAGAGCGGTCCAC...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGCACAGAAAGCTTAAGTaGCTTCTCAAATCCCACAGC +
Preference number: 4 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQHRKLK*LLKSHS
Trigger: GCTGTGGGATTTGAGAAGTCACTTAAGCTTTCTGTG...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTAAAGGCCATCACTGGTaGAATACTGGTCGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTKGHHW*NTGRAS
Trigger: AGAAGCCCGACCAGTATTTCACCAGTGATGGCCTTT...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGACATCCACCGTGTCTTaGCTTGCATTCAAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWETSTVS*LAFKCV
Trigger: CACACACTTGAATGCAAGTCAAGACACGGTGGATGT...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGGTGCCAGGCATTGTGTaGTGTGTTTTACAGGCATTA +
Preference number: 4 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQVPGIV*CVLQAL
Trigger: TAATGCCTGTAAAACACATCACACAATGCCTGGCAC...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCGGATTTGAGCTGGCCTaGACCACAATATTCAGACAC +
Preference number: 4 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFGFELA*TTIFRH
Trigger: GTGTCTGAATATTGTGGTTCAGGCCAGCTCAAATCC...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGATTCACAGGCCCCTCTaGAGCTCCTGGCCGCCACAG +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWIHRPL*SSWPPQ
Trigger: CTGTGGCGGCCAGGAGCTTCAGAGGGGCCTGTGAAT...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGGAACACTCCTTAAGCTaGAAAGTCTCGTCTCTACCC +
Preference number: 4 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEEHSLS*KVSSLP
Trigger: GGGTAGAGACGAGACTTTTCAGCTTAAGGAGTGTTC...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCGGTGATGGTGGCACCTaGCCAATGATGGAGTACTTC +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLGDGGT*PMMEYF
Trigger: GAAGTACTCCATCATTGGGCAGGTGCCACCATCACC...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCTTCCTGATCCCACGGTaGCACAAACTCCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLFLIPR*HKLPEQ
Trigger: CTGCTCAGGGAGTTTGTGGCACCGTGGGATCAGGAA...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTCACCGTGTCTTGACTTaGATTCAAGTGTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTHRVLT*IQVCGW
Trigger: CCACCCACACACTTGAATGCAAGTCAAGACACGGTG...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCGAAGCGCCCACAGTTTaGGTTGTGAAGCCATTCGCA +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLEAPTV*VVKPFA
Trigger: TGCGAATGGCTTCACAACCCAAACTGTGGGCGCTTC...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGCTTTCACCATTTCGATaGTCTCCTGACCTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQLSPFR*SPDLRF
Trigger: AAAACGGAGGTCAGGAGACCATCGAAATGGTGAAAG...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCATTCAAGTGTGTGGGTaGGGAGAGTGGCTGATTCAT +
Preference number: 4 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFIQVCG*GEWLIH
Trigger: ATGAATCAGCCACTCTCCCCACCCACACACTTGAAT...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAATCAGGGCCCTCATCCTaGTCTTCTACATTAACAGTA +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQSGPSS*SSTLTV
Trigger: TACTGTTAATGTAGAAGATCAGGATGAGGGCCCTGA...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTACTGCCAAACAGCCATaGCCTCCCAGGCAAGTGACT +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSTAKQP*PPRQVT
Trigger: AGTCACTTGCCTGGGAGGTCATGGCTGTTTGGCAGT...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTGGCTTCTGGGAAAGGTaGATAAGAGCATCATGGCAA +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTGFWER*IRASWQ
Trigger: TTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCC...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAACCTGGAAGCTACTATaGGCCATGAAATTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQTWKLL*AMKFPK
Trigger: CTTTGGGAATTTCATGGCTCATAGTAGCTTCCAGGT...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAGCTGAATACCACAAATaGGAGACCTGGAAGCTACTA +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQAEYHK*ETWKLL
Trigger: TAGTAGCTTCCAGGTCTCTCATTTGTGGTATTCAGC...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGCTCGCAGGGGAGCTaGTATAAGAGCTGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLGSQGS*YKSCRF
Trigger: AAACCTACAGCTCTTATATCAGCTCCCCTGCGAGCC...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTAGGCAGAGGTTGCAGTaGGCCATGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSRQRLQ*AMIMPL
Trigger: CAGTGGCATGATCATGGCTCACTGCAACCTCTGCCT...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTAGGCAGAGGTTGCAGTaGGCCATGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLRQRLQ*AMIMPL
Trigger: CAGTGGCATGATCATGGCTCACTGCAACCTCTGCCT...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTCCTACATGTCCTACGTaGGAAGAGCAGGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSPTCPT*EEQGWE
Trigger: TTCCCAGCCCTGCTCTTCTCACGTAGGACATGTAGG...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAATTAACTGAAAAGCAGTaGGTGTTCTGCTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQLTEKQ*VFCSVL
Trigger: GAGGACAGAGCAGAACACTCACTGCTTTTCAGTTAA...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTAGCCTGTTACTCCTGTaGCTGATTCATGAGGGATCT +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTSLLLL*LIHEGS
Trigger: AGATCCCTCATGAATCAGTCACAGGAGTAACAGGCT...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTCACACAACAGCACAGTaGTGCCAAACAGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLHTTAQ*CQTVAA
Trigger: GGCAGCAACTGTTTGGCATCACTGTGCTGTTGTGTG...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCTACTTCAGGCGTGTGTaGATCGTGTCAGGCTCATCT +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLYFRRV*IVSGSS
Trigger: AGATGAGCCTGACACGATGCACACACGCCTGAAGTA...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCGGTGATGGTGGCACCTaGCCAATGATGGAGTACTTC +
Preference number: 4 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLGDGGT*PMMEYF
Trigger: GAAGTACTCCATCATTGGGCAGGTGCCACCATCACC...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAACACTCATCTCTTCATaGATGCTTCTGCTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQTLISS*MLLLVS
Trigger: GGACACTAGCAGAAGCATGCATGAAGAGATGAGTGT...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAAACTACCCCTTCTGTCTaGCCCTCTCACTATCCCAAG +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQTTPSV*PSHYPK
Trigger: CTTGGGATAGTGAGAGGGGCAGACAGAAGGGGTAGT...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGGGCTTGAGAAGAATATaGTCCAAATCCATGACACAG +
Preference number: 4 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQGLRRI*SKSMTQ
Trigger: CTGTGTCATGGATTTGGAGCATATTCTTCTCAAGCC...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCAACTCATGTCCTTGGTaGCTGGGAGTTTTCCAATTG +
Preference number: 4 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFNSCPW*LGVFQL
Trigger: CAATTGGAAAACTCCCAGGCACCAAGGACATGAGTT...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTGAGCCCATCTTCTCTTaGCGCGCCTTAGAACTTTTT +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTEPIFS*RALELF
Trigger: AAAAAGTTCTAAGGCGCGCCAAGAGAAGATGGGCTC...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGAAATTCCGAGGTTCTTaGTCAACTCCAGGACCTCTT +
Preference number: 4 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEKFRGS*STPGPL
Trigger: AAGAGGTCCTGGAGTTGACCAAGAACCTCGGAATTT...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCTCAAAGGGTGGGCCATaGATAGGCTCATCAGGATCA +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLSKGGP*IGSSGS
Trigger: TGATCCTGATGAGCCTATCCATGGCCCACCCTTTGA...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCGGAGTGCCTTTTAGGTaGACCGCTCTGTATGACTCT +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLGVPFR*TALYDS
Trigger: AGAGTCATACAGAGCGGTCCACCTAAAAGGCACTCC...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTGGAAGTCTTAGCACTTaGGGTTACTATGACGACTGC +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTGSLST*GYYDDC
Trigger: GCAGTCGTCATAGTAACCCCAAGTGCTAAGACTTCC...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGTCACTGGTGAAATACTaGTCGGGCTTCTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGSLVKY*SGFWER
Trigger: CCTTTCCCAGAAGCCCGACCAGTATTTCACCAGTGA...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGGTCAAGACTTCAATCTaGAGTCCAGGAATGGAGATG +
Preference number: 4 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEVKTSI*SPGMEM
Trigger: CATCTCCATTCCTGGACTCCAGATTGAAGTCTTGAC...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCAACCTCATGAATGCTTaGATTGGGAGTAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFNLMNA*IGSSRS
Trigger: GCTTCTGCTACTCCCAATCCAAGCATTCATGAGGTT...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGTCTCCCAGCCTAACATaGAAAAAGCTCGTAGATGTA +
Preference number: 4 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQSPSLT*KKLVDV
Trigger: TACATCTACGAGCTTTTTCCATGTTAGGCTGGGAGA...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAACATGTCCTTGGTGCCTaGGAGTTTTCCAATTGGCCC +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQHVLGA*EFSNWP
Trigger: GGGCCAATTGGAAAACTCCCAGGCACCAAGGACATG...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAGTTAACTCATGTCCTTaGTGCCTGGGAGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQVNSCP*CLGVFQ
Trigger: TTGGAAAACTCCCAGGCACCAAGGACATGAGTTAAC...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGGTGGCACCTGCCCAATaGTGGAGTACTTCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWVAPAQ*WSTSGV
Trigger: CACGCCTGAAGTACTCCATCATTGGGCAGGTGCCAC...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAGTGGCACCTGCCCAATaGTGGAGTACTTCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILVAPAQ*WSTSGV
Trigger: CACGCCTGAAGTACTCCATCATTGGGCAGGTGCCAC...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAGTGCCACAAACTCCCTaGGCAGAAGCGCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILVPQTP*AEAPTV
Trigger: AACTGTGGGCGCTTCTGCTCAGGGAGTTTGTGGCAC...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTTACACCTCAACCTCATaGATGCTTGGATTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTYTSTS*MLGLGV
Trigger: TACTCCCAATCCAAGCATTCATGAGGTTGAGGTGTA...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGACACAAACCTGTAGATaGAAACTTTACAGCCATGTG +
Preference number: 4 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQTQTCR*KLYSHV
Trigger: CACATGGCTGTAAAGTTTTCATCTACAGGTTTGTGT...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGGGATTTGAGCTGGCCTaGACCACAATATTCAGACAC +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGGFELA*TTIFRH
Trigger: GTGTCTGAATATTGTGGTTCAGGCCAGCTCAAATCC...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGATTGGTGGTAGGATTTaGGCTGGCCTGAACCACAAT +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGIGGRI*AGLNHN
Trigger: ATTGTGGTTCAGGCCAGCTCAAATCCTACCACCAAT...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGCTCTCAGGGCACACATaGGCACGGTGGTTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFELSGHT*ARWFPV
Trigger: AACAGGAAACCACCGTGCTCATGTGTGCCCTGAGAG...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCCTCTCAGGGCACACATaGGCACGGTGGTTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTLSGHT*ARWFPV
Trigger: AACAGGAAACCACCGTGCTCATGTGTGCCCTGAGAG...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAGCCACTGGCTTTCAGAGACTTATTAGAACACACTCATCTCTTCATGCATGCTGGATCCACGTCTTTCTaGCTGCGAAGTCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KPLAFRDLLEHTHLFMHAGSTSF*LRSLCV
Trigger: CACACACAGACTTCGCAGTCAGAAAGACGTGGATCC...AGCATGCATGAAGAGATGAGTGTGTTCTAATAAGTCTCTGAAAGCCAGTGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251081.8
CDS-3UTR GCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTCGCCACCCTTTTACCTaGGCAAGGTGTTTCTCACCA +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSRHPFT*ARCFSP
Trigger: TGGTGAGAAACACCTTGCGCAGGTAAAAGGGTGGCG...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAATTTTTGATGGTCTCTaGCTCTCTATCCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQIFDGL*LSIQAS
Trigger: AGAAGCCTGGATAGAGAGGCAGAGACCATCAAAAAT...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTGCAATCCCATACGAATaGCTCAGCAATCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTAIPYE*LSNLCT
Trigger: AGTGCAAAGATTGCTGAGGCATTCGTATGGGATTGC...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCGGTTACTATGACGACTaGCAAACAGCCATGACCTCC +
Preference number: 4 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLGYYDD*QTAMTS
Trigger: GGAGGTCATGGCTGTTTGGCAGTCGTCATAGTAACC...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTCCCCCAGACACACACTaGATGGAACAGAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLPPDTH*MEQKIL
Trigger: CAAGATCTTCTGTTCCATGCAGTGTGTGTCTGGGGG...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGTATGCACTTACTATGTaGCAGGCATTGTGTGATGTG +
Preference number: 4 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEYALTM*QALCDV
Trigger: CACATCACACAATGCCTGGCACATAGTAAGTGCATA...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTACCCAGATCTGAACCTTaGCTGTTGGGCCCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILPRSEP*LLGPKG
Trigger: TCCCTTGGGGCCCAACAGGCAAGGTTCAGATCTGGG...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAATCTCGGCATCTAGTTTaGAGGGAACATGTAATGTCA +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQSRHLV*REHVMS
Trigger: TGACATTACATGTTCCCTCCAAACTAGATGCCGAGA...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGGAGCCCATCTTCTCTTaGCGCGCCTTAGAACTTTTT +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGEPIFS*RALELF
Trigger: AAAAAGTTCTAAGGCGCGCCAAGAGAAGATGGGCTC...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCCATCGAACAAGGAATTaGAGCCCATCTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLHRTRN*SPSSLG
Trigger: GCCAAGAGAAGATGGGCTCCAATTCCTTGTTCGATG...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAAGGGCAGTGGAAGTTCTaGAGTATACCCATCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQGQWKF*SIPIWS
Trigger: ACTCCAGATGGGTATACTCCAGAACTTCCACTGCCC...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGACTAAAGTCAAAGGGTaGGCCATGGATAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGTKVKG*AMDRLI
Trigger: GATGAGCCTATCCATGGCCCACCCTTTGACTTTAGT...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCACTAAAGTCAAAGGGTaGGCCATGGATAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLTKVKG*AMDRLI
Trigger: GATGAGCCTATCCATGGCCCACCCTTTGACTTTAGT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTTCACTGGTGAAATACTaGTCGGGCTTCTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLSLVKY*SGFWER
Trigger: CCTTTCCCAGAAGCCCGACCAGTATTTCACCAGTGA...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGTCTGGAGTCCAGGAATaGAGATGGAGACAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGSGVQE*RWRQKG
Trigger: TCCCTTTTGTCTCCATCTCCATTCCTGGACTCCAGA...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGATTCAAGTGTGTGGGTaGGGAGAGTGGCTGATTCAT +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGIQVCG*GEWLIH
Trigger: ATGAATCAGCCACTCTCCCCACCCACACACTTGAAT...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGATATGGGGCAATTATTaGTGGCTACAAGTAGGTTCG +
Preference number: 4 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEIWGNY*WLQVGS
Trigger: CGAACCTACTTGTAGCCACCAATAATTGCCCCATAT...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTGTTAACTCATGTCCTTaGTGCCTGGGAGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTVNSCP*CLGVFQ
Trigger: TTGGAAAACTCCCAGGCACCAAGGACATGAGTTAAC...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGTTTCATCCTCTATTTTaGTTATTAGGGGCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQFHPLF*LLGAVE
Trigger: TTCCACTGCCCCTAATAATCAAAATAGAGGATGAAA...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCTCAGGGCCCTCATCCTaGTCTTCTACATTAACAGTA +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLSGPSS*SSTLTV
Trigger: TACTGTTAATGTAGAAGATCAGGATGAGGGCCCTGA...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGTTATCATTCACGTCTTaGAGTATAATGCCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWELSFTS*SIMPSV
Trigger: GACACTGGGCATTATACTTCAAGACGTGAATGATAA...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTAACAATCTCCGCAGATaGCATGGTGGGTTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLNNLRR*HGGFAD
Trigger: ATCTGCAAACCCACCATGTCATCTGCGGAGATTGTT...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAACCACAGTTTGGGTTGTaGAGCCATTCGCAGAATACA +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQPQFGL*SHSQNT
Trigger: TGTATTCTGCGAATGGCTTCACAACCCAAACTGTGG...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAGCCACTGGCTTTCAGAGACTTATTAGAACACACTCATCTCTTCATGCATGCTTCCGTTTTTGATTCCTaGTCCCACGGTGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: KPLAFRDLLEHTHLFMHASVFDS*SHGATN
Trigger: GTTTGTGGCACCGTGGGATCAGGAATCAAAAACGGA...AGCATGCATGAAGAGATGAGTGTGTTCTAATAAGTCTCTGAAAGCCAGTGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251081.8
CDS-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACCCAATCTTGTGAATTaGAGACAGGCACATTATAGA +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQPNLVN*RQAHYR
Trigger: TCTATAATGTGCCTGTCTTCAATTCACAAGATTGGG...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTGGGGTCTTACTTCTCTaGTTCAGGGAGTGCGAAATC +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSGVLLL*FRECEI
Trigger: GATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCC...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCCGTATTCTGAAAAACTaGACATACAAGACCCAGTCA +
Preference number: 4 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFRILKN*TYKTQS
Trigger: TGACTGGGTCTTGTATGTTCAGTTTTTCAGAATACG...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAGACCTCCCAGGCAAGTaGCTGCTAATGTCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRDLPGK*LLMSSW
Trigger: CCAGCTAGACATTAGCAGTCACTTGCCTGGGAGGTC...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCTGCCAACTCTTTTCATaGATTAACTCTGACAAAGCC +
Preference number: 4 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFCQLFS*INSDKA
Trigger: GGCTTTGTCAGAGTTAATTCATGAAAAGAGTTGGCA...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAATGGGAAGGCATCAAATaGCTACAGTACAAACAAAGT +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQWEGIK*LQYKQS
Trigger: ACTTTGTTTGTACTGTAGTCATTTGATGCCTTCCCA...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGTACACCTCAACCTCATaGATGCTTGGATTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGYTSTS*MLGLGV
Trigger: TACTCCCAATCCAAGCATTCATGAGGTTGAGGTGTA...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGCCTACATGTCCTACGTaGGAAGAGCAGGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWPTCPT*EEQGWE
Trigger: TTCCCAGCCCTGCTCTTCTCACGTAGGACATGTAGG...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACTGCTTCTTAGCTATTaGTGGGATAAAGAACACAAG +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQLLLSY*WDKEHK
Trigger: CTTGTGTTCTTTATCCCATCAATAGCTAAGAAGCAG...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCGAACACTCCTTAAGCTaGAAAGTCTCGTCTCTACCC +
Preference number: 4 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLEHSLS*KVSSLP
Trigger: GGGTAGAGACGAGACTTTTCAGCTTAAGGAGTGTTC...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTACATCTTGTGTATATTaGCACCCTCTGCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTTSCVY*HPLLLS
Trigger: TGAAAGGAGCAGAGGGTGTCAATATACACAAGATGT...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCAATTTGAGGTTTCTGTaGTTTCCCAAGGTAACACAG +
Preference number: 4 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFNLRFL*FPKVTQ
Trigger: CTGTGTTACCTTGGGAAATCACAGAAACCTCAAATT...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAATGCATAACAAATTACTaGCGACAAATCCTAAGTGCG +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQCITNY*RQILSA
Trigger: CGCACTTAGGATTTGTCGTCAGTAATTTGTTATGCA...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCACGCCTGTAGTTGGATaGATAGAAAATAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLTPVVG*IENRVG
Trigger: ACCCACCCTATTTTCTATGCATCCAACTACAGGCGT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAGATGCAAAAGAGCAATaGTATGCCCAACAATATTGC +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQDAKEQ*YAQQYC
Trigger: GCAATATTGTTGGGCATAGCATTGCTCTTTTGCATC...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGATTCCTGATCCCACGGTaGCACAAACTCCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRFLIPR*HKLPEQ
Trigger: CTGCTCAGGGAGTTTGTGGCACCGTGGGATCAGGAA...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATTCCTGATCCCACGGTaGCACAAACTCCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILFLIPR*HKLPEQ
Trigger: CTGCTCAGGGAGTTTGTGGCACCGTGGGATCAGGAA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTGGTTACTATGACGACTaGCAAACAGCCATGACCTCC +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLGYYDD*QTAMTS
Trigger: GGAGGTCATGGCTGTTTGGCAGTCGTCATAGTAACC...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAAAGCTCGTAGATGTATaGCACTTTCTTTGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQKLVDV*HFLCFV
Trigger: CACAAAGCAAAGAAAGTGGCATACATCTACGAGCTT...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGTATATTGACACCCTCTaGTCCTTTCACCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGYIDTL*SFHLWL
Trigger: AAGCCAGAGGTGAAAGGAGCAGAGGGTGTCAATATA...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCTTTTGCAGGCATCACTaGCAAATATTAAGATCGCGA +
Preference number: 4 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFFCRHH*QILRSR
Trigger: TCGCGATCTTAATATTTGCCAGTGATGCCTGCAAAA...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTTGGAGTATACCCATCTaGAGTTGTTGCAAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTWSIPI*SCCKGN
Trigger: ATTGCCTTTGCAACAACTCCAGATGGGTATACTCCA...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGATCAGGAATTACTTTTaGTTGTTTAGACGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQIRNYF*LFRRPR
Trigger: TCTGGGACGTCTAAACAACCAAAAGTAATTCCTGAT...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGACAATTAGGTTCTGCTaGGCTAAATCATCAGGAATT +
Preference number: 4 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQTIRFC*AKSSGI
Trigger: AATTCCTGATGATTTAGCCCAGCAGAACCTAATTGT...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGGAAGCGCCCACAGTTTaGGTTGTGAAGCCATTCGCA +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFEEAPTV*VVKPFA
Trigger: TGCGAATGGCTTCACAACCCAAACTGTGGGCGCTTC...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCCTTTCACCATTTCGATaGTCTCCTGACCTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLLSPFR*SPDLRF
Trigger: AAAACGGAGGTCAGGAGACCATCGAAATGGTGAAAG...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCGGAAGTCTTAGCACTTaGGGTTACTATGACGACTGC +
Preference number: 4 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLGSLST*GYYDDC
Trigger: GCAGTCGTCATAGTAACCCCAAGTGCTAAGACTTCC...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCTTGCTTTTCCTCAGGTaGTTAGAGAGTGGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLLLFLR*LESGLL
Trigger: CAAAAGGCCACTCTCTAACCACCTGAGGAAAAGCAA...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTACAGTTGCTGCCTTCTaGACAGTCACTTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSTVAAF*TVTCST
Trigger: GGTGGAACAAGTGACTGTCCAGAAGGCAGCAACTGT...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCTGGGAGTTTTCCAATTaGCCCTGTTCCCAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTWEFSN*PCSQGN
Trigger: GTTCCCCTGGGAACAGGGCCAATTGGAAAACTCCCA...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCAACAAAGCTGAGATTTaGATCCACGTCTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFNKAEI*IHVFLT
Trigger: AGTCAGAAAGACGTGGATCCAAATCTCAGCTTTGTT...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CAA 72 bp GTGATGCCAAACAGTTGCTGCCTTCTGGACAGTCACTaGTTCCACCTGCTGTTGACCTTTCTAGTTCTATTT +
Preference number: 4 (lower is better)
Translates to: VMPNSCCLLDSH*FHLLLTFLVLF
Trigger: AAATAGAACTAGAAAGGTCAACAGCAGGTGGAACAAGTGACTGTCCAGAAGGCAGCAACTGTTTGGCATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAAAACTCTCTGTCTAGCTaGGATGATGTTGTGGTGATC +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQNSLSS*DDVVVI
Trigger: GATCACCACAACATCATCTCAGCTAGACAGAGAGTT...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCAACTCTCTGTCTAGCTaGGATGATGTTGTGGTGATC +
Preference number: 4 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLNSLSS*DDVVVI
Trigger: GATCACCACAACATCATCTCAGCTAGACAGAGAGTT...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATGCTGTGCTCATGGCTaGTCTTGGACTAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILCCAHG*SWTSLS
Trigger: AGAGAGGCTAGTCCAAGATCAGCCATGAGCACAGCA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAATATTTTCATCAATGGTaGCCCACCCTGTTGGATCAG +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQYFHQW*PTLLDQ
Trigger: CTGATCCAACAGGGTGGGTCACCATTGATGAAAATA...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTTTATCATTCACGTCTTaGAGTATAATGCCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTLSFTS*SIMPSV
Trigger: GACACTGGGCATTATACTTCAAGACGTGAATGATAA...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTAACAATCTCCGCAGATaGCATGGTGGGTTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSNNLRR*HGGFAD
Trigger: ATCTGCAAACCCACCATGTCATCTGCGGAGATTGTT...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCCAGTGTAACATCCAATaGAGTGACACTAGACATGCC +
Preference number: 4 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLQCNIQ*SDTRHA
Trigger: GGCATGTCTAGTGTCACTTCATTGGATGTTACACTG...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCTCTCCCTTTGCACAGTaGAAAGGTCACATTACAAGA +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLSPFAQ*KGHITR
Trigger: TCTTGTAATGTGACCTTTTCACTGTGCAAAGGGAGA...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGGCTTTTCATCCAATTTaGACCTTACAGTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEAFHPI*TLQFHS
Trigger: ACTGTGAAACTGTAAGGTTCAAATTGGATGAAAAGC...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTGGCTTCTGGGAAAGGTaGATAAGAGCATCATGGCAA +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSGFWER*IRASWQ
Trigger: TTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCC...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAAAGCTACTATGAGCCATaGAATTCCCAAAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQSYYEP*NSQRPS
Trigger: TGATGGCCTTTGGGAATTTCATGGCTCATAGTAGCT...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTAGCTACTATGAGCCATaGAATTCCCAAAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLSYYEP*NSQRPS
Trigger: TGATGGCCTTTGGGAATTTCATGGCTCATAGTAGCT...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAGGTGGGGAGAGTGGCTaGTTCATCTTGCACTTTCTC +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRGGESG*FILHFL
Trigger: GAGAAAGTGCAAGATGAATCAGCCACTCTCCCCACC...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGATAGGCATGCAATTGTaGACACCTTTCTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGIGMQL*TPFLVL
Trigger: AAGGACCAAGAAAGGTGTTCACAATTGCATGCCTAT...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGGGCAGAAGAATTGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWGRRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCAATTCTTCTGCC...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTTATAGGCATTGCCTCTaGGGCTCATTGCTATGCATT +
Preference number: 4 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLYRHCL*GSLLCI
Trigger: AATGCATAGCAATGAGCCTCAGAGGCAATGCCTATA...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAATATAGGCATTGCCTCTaGGGCTCATTGCTATGCATT +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQYRHCL*GSLLCI
Trigger: AATGCATAGCAATGAGCCTCAGAGGCAATGCCTATA...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTAGCCTGTTACTCCTGTaGCTGATTCATGAGGGATCT +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLSLLLL*LIHEGS
Trigger: AGATCCCTCATGAATCAGTCACAGGAGTAACAGGCT...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCATAGCTGCTGGTTATTaGTATACTGATGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLIAAGY*YTDEPS
Trigger: GCTTGGCTCATCAGTATATCAATAACCAGCAGCTAT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGACGCCACCCTTTTACCTaGGCAAGGTGTTTCTCACCA +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRRHPFT*ARCFSP
Trigger: TGGTGAGAAACACCTTGCGCAGGTAAAAGGGTGGCG...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAGGTGATGGTGGCACCTaGCCAATGATGGAGTACTTC +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILGDGGT*PMMEYF
Trigger: GAAGTACTCCATCATTGGGCAGGTGCCACCATCACC...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGTGCTGTATCATTAATTaGTTTCAGTCTCCACATTCT +
Preference number: 4 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQCCIIN*FQSPHS
Trigger: AGAATGTGGAGACTGAAAGCAATTAATGATACAGCA...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTGATACAATTAGGTTCTaGTGGGCTAAATCATCAGGA +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTDTIRF*WAKSSG
Trigger: TCCTGATGATTTAGCCCAGCAGAACCTAATTGTATC...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAAACACTCATCTCTTCATaGATGCTTCTGCTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQTLISS*MLLLVS
Trigger: GGACACTAGCAGAAGCATGCATGAAGAGATGAGTGT...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAATGGAACAGAAGATCTTaGTGCTTTTCATTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQWNRRS*CFSFAE
Trigger: TTCAGCAAATGAAAAGCAGCAAGATCTTCTGTTCCA...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGCACCGTGTCTTGACTTaGATTCAAGTGTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFEHRVLT*IQVCGW
Trigger: CCACCCACACACTTGAATGCAAGTCAAGACACGGTG...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCGGTGTCAAAGAAATATaGATTCAGCATTCTCCTACA +
Preference number: 4 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFGVKEI*IQHSPT
Trigger: TGTAGGAGAATGCTGAATGCATATTTCTTTGACACC...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTAACTCATGTCCTTGGTaGCTGGGAGTTTTCCAATTG +
Preference number: 4 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLNSCPW*LGVFQL
Trigger: CAATTGGAAAACTCCCAGGCACCAAGGACATGAGTT...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTCATCGAACAAGGAATTaGAGCCCATCTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLHRTRN*SPSSLG
Trigger: GCCAAGAGAAGATGGGCTCCAATTCCTTGTTCGATG...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAAAAATTCCGAGGTTCTTaGTCAACTCCAGGACCTCTT +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQKFRGS*STPGPL
Trigger: AAGAGGTCCTGGAGTTGACCAAGAACCTCGGAATTT...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCTGGAGTATACCCATCTaGAGTTGTTGCAAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLWSIPI*SCCKGN
Trigger: ATTGCCTTTGCAACAACTCCAGATGGGTATACTCCA...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCGGGCAGTGGAAGTTCTaGAGTATACCCATCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTGQWKF*SIPIWS
Trigger: ACTCCAGATGGGTATACTCCAGAACTTCCACTGCCC...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCAGCCTCTCTGGAAAATaGAGCTTCATTAACTACACC +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLSLSGK*SFINYT
Trigger: GGTGTAGTTAATGAAGCTCCATTTTCCAGAGAGGCT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAGCGAACAGTCTGTATTaGAGGGTTACACTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILANSLY*RVTLRA
Trigger: GGCCCTGAGTGTAACCCTCCAATACAGACTGTTCGC...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTCATGTTCTCCCTCCTTaGTCTGATGCAAGGACTGTA +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLHVLPP*SDARTV
Trigger: TACAGTCCTTGCATCAGACCAAGGAGGGAGAACATG...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGTCAAAGGGTGGGCCATaGATAGGCTCATCAGGATCA +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFESKGGP*IGSSGS
Trigger: TGATCCTGATGAGCCTATCCATGGCCCACCCTTTGA...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTACTAAAGTCAAAGGGTaGGCCATGGATAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLTKVKG*AMDRLI
Trigger: GATGAGCCTATCCATGGCCCACCCTTTGACTTTAGT...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCATATGGGGCAATTATTaGTGGCTACAAGTAGGTTCG +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLIWGNY*WLQVGS
Trigger: CGAACCTACTTGTAGCCACCAATAATTGCCCCATAT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAGGTTACATTTCAATATaGGGCAATTATTGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQGYISI*GNYWWL
Trigger: TAGCCACCAATAATTGCCCCATATTGAAATGTAACC...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGACAGTTGCTGCCTTCTaGACAGTCACTTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFETVAAF*TVTCST
Trigger: GGTGGAACAAGTGACTGTCCAGAAGGCAGCAACTGT...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CAA 72 bp AGGATAGAGCCGGAATTTGCATCAAGACACTCTTACTaGGAAGTCTTAGCACTTGGGGTTACTATGACGACT +
Preference number: 4 (lower is better)
Translates to: RIEPEFASRHSY*EVLALGVTMTT
Trigger: AGTCGTCATAGTAACCCCAAGTGCTAAGACTTCCAAGTAAGAGTGTCTTGATGCAAATTCCGGCTCTATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTTATAGGTACTACATATaGGCCAAATGGAGGATCATT +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTYRYYI*AKWRII
Trigger: AATGATCCTCCATTTGGCTCATATGTAGTACCTATA...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCCCACAGTTTGGGTTGTaGAGCCATTCGCAGAATACA +
Preference number: 4 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTPQFGL*SHSQNT
Trigger: TGTATTCTGCGAATGGCTTCACAACCCAAACTGTGG...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGTCCGTTTTTGATTCCTaGTCCCACGGTGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWSVFDS*SHGATN
Trigger: GTTTGTGGCACCGTGGGATCAGGAATCAAAAACGGA...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCCCCAATCTTGTGAATTaGAGACAGGCACATTATAGA +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLPNLVN*RQAHYR
Trigger: TCTATAATGTGCCTGTCTTCAATTCACAAGATTGGG...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGGGGGTCTTACTTCTCTaGTTCAGGGAGTGCGAAATC +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWGVLLL*FRECEI
Trigger: GATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCC...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTAGCCAAGGAAGGGATTaGCAGGGAGAATCTAAAATA +
Preference number: 4 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLSQGRD*QGESKI
Trigger: TATTTTAGATTCTCCCTGTCAATCCCTTCCTTGGCT...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCACATCCACCGTGTCTTaGCTTGCATTCAAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTTSTVS*LAFKCV
Trigger: CACACACTTGAATGCAAGTCAAGACACGGTGGATGT...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAACACTCACTAGTGTCCTaGAGTTCTTTCACATCATCT +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQHSLVS*SSFTSS
Trigger: AGATGATGTGAAAGAACTTCAGGACACTAGTGAGTG...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAAAGAGTGGGAACAGCTaGCATAGGGTACACCTCAAC +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRKSGNS*HRVHLN
Trigger: GTTGAGGTGTACCCTATGTCAGCTGTTCCCACTCTT...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGAATATTGATCAGGAATaGAGTGAAGAGTGGGAACAG +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGNIDQE*SEEWEQ
Trigger: CTGTTCCCACTCTTCACTTCATTCCTGATCAATATT...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGTTAGGCAGAATGGCATaGTCATATCTGCTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGLGRMA*SYLLFD
Trigger: ATCAAAGAGCAGATATGATCATGCCATTCTGCCTAA...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTACATCTTGTGTATATTaGCACCCTCTGCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLTSCVY*HPLLLS
Trigger: TGAAAGGAGCAGAGGGTGTCAATATACACAAGATGT...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCAATTTGAGGTTTCTGTaGTTTCCCAAGGTAACACAG +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLNLRFL*FPKVTQ
Trigger: CTGTGTTACCTTGGGAAATCACAGAAACCTCAAATT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCTCAAAAGATTCATACTaGTCACGATCTACAGGACGA +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLSKDSY*SRSTGR
Trigger: TCGTCCTGTAGATCGTGAGCAGTATGAATCTTTTGA...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGTATACCTTATGCCACTaGTACTTCTTGTTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGYTLCH*YFLFLG
Trigger: ACCCAGAAACAAGAAGTAGCAGTGGCATAAGGTATA...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCGATGCAAAAGAGCAATaGTATGCCCAACAATATTGC +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLDAKEQ*YAQQYC
Trigger: GCAATATTGTTGGGCATAGCATTGCTCTTTTGCATC...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCGATACAATTAGGTTCTaGTGGGCTAAATCATCAGGA +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLDTIRF*WAKSSG
Trigger: TCCTGATGATTTAGCCCAGCAGAACCTAATTGTATC...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGCTAGAAATCTCCCTTTaGACAGTGAAAAGGTCACAT +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGLEISL*TVKRSH
Trigger: ATGTGACCTTTTCACTGTGCAAAGGGAGATTTCTAG...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGGATAGAGCCGGAATTTaGATCAAGACACTCTTACTT +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGDRAGI*IKTLLL
Trigger: AAGTAAGAGTGTCTTGATGCAAATTCCGGCTCTATC...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGACCCCCAGACACACACTaGATGGAACAGAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRPPDTH*MEQKIL
Trigger: CAAGATCTTCTGTTCCATGCAGTGTGTGTCTGGGGG...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAATGGCATGATCATATCTaGTCTTTGATGGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQWHDHI*SLMALE
Trigger: TTCAAGGGCCATCAAAGAGCAGATATGATCATGCCA...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTTGGCATGATCATATCTaGTCTTTGATGGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLWHDHI*SLMALE
Trigger: TTCAAGGGCCATCAAAGAGCAGATATGATCATGCCA...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCAACTTTACAGCCATGTaGTCTAGACACACAAATGTC +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLNFTAM*SRHTNV
Trigger: GACATTTGTGTGTCTAGAGCACATGGCTGTAAAGTT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCAAGCTCGTAGATGTATaGCACTTTCTTTGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLKLVDV*HFLCFV
Trigger: CACAAAGCAAAGAAAGTGGCATACATCTACGAGCTT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCTTATGGAATAGTATATaGTATAGTTTTGGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFLWNSI*YSFGPC
Trigger: ACACGGCCCAAAACTATACCATATACTATTCCATAA...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTCTCCAGGACCTCTTATaGAATAGTATATGGTATAGT +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTLQDLL*NSIWYS
Trigger: ACTATACCATATACTATTCCATAAGAGGTCCTGGAG...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAGGGCAGTGGAAGTTCTaGAGTATACCCATCTGGAGT +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILGQWKF*SIPIWS
Trigger: ACTCCAGATGGGTATACTCCAGAACTTCCACTGCCC...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCAAAGAACTCCTTCATTaGTTTTGGCATCTGTTACAA +
Preference number: 4 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFKELLH*FWHLLQ
Trigger: TTGTAACAGATGCCAAAACCAATGAAGGAGTTCTTT...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAAAGCCTCTCTGGAAAATaGAGCTTCATTAACTACACC +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQSLSGK*SFINYT
Trigger: GGTGTAGTTAATGAAGCTCCATTTTCCAGAGAGGCT...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCCATGTTCTCCCTCCTTaGTCTGATGCAAGGACTGTA +
Preference number: 4 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTHVLPP*SDARTV
Trigger: TACAGTCCTTGCATCAGACCAAGGAGGGAGAACATG...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATCCACCGCCAATCCTTaGATCTACACGATGTGTGCA +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILSTANP*IYTMCA
Trigger: TGCACACATCGTGTAGATCCAAGGATTGGCGGTGGA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTACAATTAGGTTCTGCTaGGCTAAATCATCAGGAATT +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTTIRFC*AKSSGI
Trigger: AATTCCTGATGATTTAGCCCAGCAGAACCTAATTGT...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCTATCACACTGACTTCTaGCTAGGGATGAATAAGATG +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLYHTDF*LGMNKM
Trigger: CATCTTATTCATCCCTAGCCAGAAGTCAGTGTGATA...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTTCAAGCCTAAGTAAGTaGAAGAAGGGCACCATTGTG +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLSSLSK*KKGTIV
Trigger: CACAATGGTGCCCTTCTTCCACTTACTTAGGCTTGA...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGTTGCATTCAAGTGTGTaGGTGGGGAGAGTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWLHSSV*VGRVAD
Trigger: ATCAGCCACTCTCCCCACCCACACACTTGAATGCAA...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAAATGTTAGGCATACAGTaGTCAAGAAGACAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQMLGIQ*SRRQRR
Trigger: TCTCCTCTGTCTTCTTGACCACTGTATGCCTAACAT...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAATTAGGATATACCAAATaGCTTGAGAAGAATATGCTC +
Preference number: 4 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQLGYTK*LEKNML
Trigger: GAGCATATTCTTCTCAAGCCATTTGGTATATCCTAA...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
3UTR CAA 72 bp AACCCTTGGGGGTTACATTTCAATATGGGGCAATTATaGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTG +
Preference number: 4 (lower is better)
Translates to: NPWGLHFNMGQL*VATSRFVQLLV
Trigger: CACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAATGCTGTGCTCATGGCTaGTCTTGGACTAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWECCAHG*SWTSLS
Trigger: AGAGAGGCTAGTCCAAGATCAGCCATGAGCACAGCA...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCTCAGGGCCCTCATCCTaGTCTTCTACATTAACAGTA +
Preference number: 4 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTSGPSS*SSTLTV
Trigger: TACTGTTAATGTAGAAGATCAGGATGAGGGCCCTGA...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGAACAATCTCCGCAGATaGCATGGTGGGTTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWNNLRR*HGGFAD
Trigger: ATCTGCAAACCCACCATGTCATCTGCGGAGATTGTT...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGCCACAGTTTGGGTTGTaGAGCCATTCGCAGAATACA +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWPQFGL*SHSQNT
Trigger: TGTATTCTGCGAATGGCTTCACAACCCAAACTGTGG...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAGTGGACCGCTCTGTATaGCTCTCATGCTTCAAAACT +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRVDRSV*LSCFKT
Trigger: AGTTTTGAAGCATGAGAGTCATACAGAGCGGTCCAC...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAGTGGACCGCTCTGTATaGCTCTCATGCTTCAAAACT +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILVDRSV*LSCFKT
Trigger: AGTTTTGAAGCATGAGAGTCATACAGAGCGGTCCAC...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGGCTTTTCATCCAATTTaGACCTTACAGTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGAFHPI*TLQFHS
Trigger: ACTGTGAAACTGTAAGGTTCAAATTGGATGAAAAGC...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCGCTGAATACCACAAATaGGAGACCTGGAAGCTACTA +
Preference number: 4 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTAEYHK*ETWKLL
Trigger: TAGTAGCTTCCAGGTCTCTCATTTGTGGTATTCAGC...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAATTAGGCAGAATGGCATaGTCATATCTGCTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQLGRMA*SYLLFD
Trigger: ATCAAAGAGCAGATATGATCATGCCATTCTGCCTAA...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGATTGGTGGTAGGATTTaGGCTGGCCTGAACCACAAT +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWIGGRI*AGLNHN
Trigger: ATTGTGGTTCAGGCCAGCTCAAATCCTACCACCAAT...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCCTGCTTCTTAGCTATTaGTGGGATAAAGAACACAAG +
Preference number: 4 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLLLLSY*WDKEHK
Trigger: CTTGTGTTCTTTATCCCATCAATAGCTAAGAAGCAG...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGTTAACTGAAAAGCAGTaGGTGTTCTGCTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFELTEKQ*VFCSVL
Trigger: GAGGACAGAGCAGAACACTCACTGCTTTTCAGTTAA...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAAGGATCCACGTCTTTCTaGCTGCGAAGTCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWEGSTSF*LRSLCV
Trigger: CACACACAGACTTCGCAGTCAGAAAGACGTGGATCC...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGAAGACCAAAAGCACATaGATGCACTCAGTTATGATA +
Preference number: 4 (lower is better)
Translates to: GDKREARSQSQIWQNRIGKTKST*MHSVMI
Trigger: TATCATAACTGAGTGCATTCATGTGCTTTTGGTCTT...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCTCAAAAGATTCATACTaGTCACGATCTACAGGACGA +
Preference number: 4 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLSKDSY*SRSTGR
Trigger: TCGTCCTGTAGATCGTGAGCAGTATGAATCTTTTGA...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTCCCATCTGGAGTTGTTaGAAAGGCAATTATCTCAAA +
Preference number: 4 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLPIWSC*KGNYLK
Trigger: TTTGAGATAATTGCCTTTGCAACAACTCCAGATGGG...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGACGCCTGTAGTTGGATaGATAGAAAATAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFETPVVG*IENRVG
Trigger: ACCCACCCTATTTTCTATGCATCCAACTACAGGCGT...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTTGTTGTTCCCACTTCTaGATTTTCTTTCATGCGAAC +
Preference number: 4 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLCCSHF*IFFHAN
Trigger: GTTCGCATGAAAGAAAATGCAGAAGTGGGAACAACA...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAATATACCTTATGCCACTaGTACTTCTTGTTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQYTLCH*YFLFLG
Trigger: ACCCAGAAACAAGAAGTAGCAGTGGCATAAGGTATA...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCCTAGAAATCTCCCTTTaGACAGTGAAAAGGTCACAT +
Preference number: 4 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLLEISL*TVKRSH
Trigger: ATGTGACCTTTTCACTGTGCAAAGGGAGATTTCTAG...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCAATTGTAATAGTCAATaGCTGGCTAGAAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLNCNSQ*LARNLP
Trigger: AGGGAGATTTCTAGCCAGGCATTGACTATTACAATT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTTATTATTATCAGGAGTaGCTTTTAGGTGGACCGCTC +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLYYYQE*LLGGPL
Trigger: GAGCGGTCCACCTAAAAGGCACTCCTGATAATAATA...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGGCAATCCCATACGAATaGCTCAGCAATCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFEAIPYE*LSNLCT
Trigger: AGTGCAAAGATTGCTGAGGCATTCGTATGGGATTGC...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCAACTTTACAGCCATGTaGTCTAGACACACAAATGTC +
Preference number: 4 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLNFTAM*SRHTNV
Trigger: GACATTTGTGTGTCTAGAGCACATGGCTGTAAAGTT...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTAAAAGTAATAGGTTCTaGTTCTTAGCTATTGATGGG +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTKSNRF*FLAIDG
Trigger: CCCATCAATAGCTAAGAAGCAGAACCTATTACTTTT...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTTGTGTGGCTTTGTTCTaGATTCCTACCTTAAGACTA +
Preference number: 4 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLCVALF*IPTLRL
Trigger: TAGTCTTAAGGTAGGAATGCAGAACAAAGCCACACA...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGTATATTGACACCCTCTaGTCCTTTCACCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFEYIDTL*SFHLWL
Trigger: AAGCCAGAGGTGAAAGGAGCAGAGGGTGTCAATATA...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTTCTCGGCATCTAGTTTaGAGGGAACATGTAATGTCA +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSSRHLV*REHVMS
Trigger: TGACATTACATGTTCCCTCCAAACTAGATGCCGAGA...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGGAGCCCATCTTCTCTTaGCGCGCCTTAGAACTTTTT +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWEPIFS*RALELF
Trigger: AAAAAGTTCTAAGGCGCGCCAAGAGAAGATGGGCTC...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTACATCGAACAAGGAATTaGAGCCCATCTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILHRTRN*SPSSLG
Trigger: GCCAAGAGAAGATGGGCTCCAATTCCTTGTTCGATG...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTAAAGAACTCCTTCATTaGTTTTGGCATCTGTTACAA +
Preference number: 4 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTKELLH*FWHLLQ
Trigger: TTGTAACAGATGCCAAAACCAATGAAGGAGTTCTTT...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAAGCGAACAGTCTGTATTaGAGGGTTACACTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWEANSLY*RVTLRA
Trigger: GGCCCTGAGTGTAACCCTCCAATACAGACTGTTCGC...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCGCTACTTCTTGTTTCTaGGTCATATGCTTTATATCC +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLATSCF*VICFIS
Trigger: GGATATAAAGCATATGACCCAGAAACAAGAAGTAGC...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTACATGTTCTCCCTCCTTaGTCTGATGCAAGGACTGTA +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILHVLPP*SDARTV
Trigger: TACAGTCCTTGCATCAGACCAAGGAGGGAGAACATG...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCATCAGGAATTACTTTTaGTTGTTTAGACGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLIRNYF*LFRRPR
Trigger: TCTGGGACGTCTAAACAACCAAAAGTAATTCCTGAT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTGTAATAGTCAATGCCTaGCTAGAAATCTCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLVIVNA*LEISLC
Trigger: GCAAAGGGAGATTTCTAGCCAGGCATTGACTATTAC...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTAGCAGTAAAGCAGAGTaGAGACTGAAGCTAAATTGT +
Preference number: 4 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLSSKAE*RLKLNC
Trigger: ACAATTTAGCTTCAGTCTCCACTCTGCTTTACTGCT...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGACAGACACACACTGCATaGAACAGAAGATCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRQTHTA*NRRSCC
Trigger: GCAGCAAGATCTTCTGTTCCATGCAGTGTGTGTCTG...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGCAGACACACACTGCATaGAACAGAAGATCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWQTHTA*NRRSCC
Trigger: GCAGCAAGATCTTCTGTTCCATGCAGTGTGTGTCTG...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCGAAGAGGGAAGAAATTaGAAGCATAAACACCATTGG +
Preference number: 4 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLEEGRN*KHKHHW
Trigger: CCAATGGTGTTTATGCTTCCAATTTCTTCCCTCTTC...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGTGGGGCAATTATTGGTaGCTACAAGTAGGTTCGTGC +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWWGNYW*LQVGSC
Trigger: GCACGAACCTACTTGTAGCCACCAATAATTGCCCCA...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGATGGGGCAATTATTGGTaGCTACAAGTAGGTTCGTGC +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRWGNYW*LQVGSC
Trigger: GCACGAACCTACTTGTAGCCACCAATAATTGCCCCA...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCGGTTACATTTCAATATaGGGCAATTATTGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLGYISI*GNYWWL
Trigger: TAGCCACCAATAATTGCCCCATATTGAAATGTAACC...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGTTGCTTTTCCTCAGGTaGTTAGAGAGTGGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFELLFLR*LESGLL
Trigger: CAAAAGGCCACTCTCTAACCACCTGAGGAAAAGCAA...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTTCTCCCAGCCTAACATaGAAAAAGCTCGTAGATGTA +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLSPSLT*KKLVDV
Trigger: TACATCTACGAGCTTTTTCCATGTTAGGCTGGGAGA...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAATGGGAGTTTTCCAATTaGCCCTGTTCCCAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWEWEFSN*PCSQGN
Trigger: GTTCCCCTGGGAACAGGGCCAATTGGAAAACTCCCA...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAACATGTCCTTGGTGCCTaGGAGTTTTCCAATTGGCCC +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWEHVLGA*EFSNWP
Trigger: GGGCCAATTGGAAAACTCCCAGGCACCAAGGACATG...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCTTTTGCAGGCATCACTaGCAAATATTAAGATTCCTG +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLFCRHH*QILRFL
Trigger: CAGGAATCTTAATATTTGCCAGTGATGCCTGCAAAA...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648081.1
3UTR CAA 72 bp AGCACCAGCCATTTCTTCGGGAAACTCTTTATGATTTaGCCTCCTCGAGAATTTTACCTGCCTTTTCAGTTA +
Preference number: 4 (lower is better)
Translates to: STSHFFGKLFMI*PPREFYLPFQL
Trigger: TAACTGAAAAGGCAGGTAAAATTCTCGAGGAGGCAAAATCATAAAGAGTTTCCCGAAGAAATGGCTGGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAATTTCATCCTCTATTTTaGTTATTAGGGGCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQFHPLF*LLGAVE
Trigger: TTCCACTGCCCCTAATAATCAAAATAGAGGATGAAA...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGAACTCTCTGTCTAGCTaGGATGATGTTGTGGTGATC +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWNSLSS*DDVVVI
Trigger: GATCACCACAACATCATCTCAGCTAGACAGAGAGTT...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATATTTTCATCAATGGTaGCCCACCCTGTTGGATCAG +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILYFHQW*PTLLDQ
Trigger: CTGATCCAACAGGGTGGGTCACCATTGATGAAAATA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGCAGTGTAACATCCAATaGAGTGACACTAGACATGCC +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWQCNIQ*SDTRHA
Trigger: GGCATGTCTAGTGTCACTTCATTGGATGTTACACTG...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAATTTCGATGGTCTCCTaGCCTCCGTTTTTGATTCCT +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILISMVS*PPFLIP
Trigger: AGGAATCAAAAACGGAGGTCAGGAGACCATCGAAAT...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTCGTATTCTGAAAAACTaGACATACAAGACCCAGTCA +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLRILKN*TYKTQS
Trigger: TGACTGGGTCTTGTATGTTCAGTTTTTCAGAATACG...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGAGCCAAGGAAGGGATTaGCAGGGAGAATCTAAAATA +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFESQGRD*QGESKI
Trigger: TATTTTAGATTCTCCCTGTCAATCCCTTCCTTGGCT...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGACACAGAAAGCTTAAGTaGCTTCTCAAATCCCACAGC +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRHRKLK*LLKSHS
Trigger: GCTGTGGGATTTGAGAAGTCACTTAAGCTTTCTGTG...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGCTGCTTTTCATTTGCTaGAGAAGCACCAGCCATTTC +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWLLFIC*RSTSHF
Trigger: GAAATGGCTGGTGCTTCTTCAGCAAATGAAAAGCAG...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTACTGCTTTTCATTTGCTaGAGAAGCACCAGCCATTTC +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILLLFIC*RSTSHF
Trigger: GAAATGGCTGGTGCTTCTTCAGCAAATGAAAAGCAG...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAAAAGAGTGGGAACAGCTaGCATAGGGTACACCTCAAC +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWEKSGNS*HRVHLN
Trigger: GTTGAGGTGTACCCTATGTCAGCTGTTCCCACTCTT...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAGCCACTGGCTTTCAGAGACTTATTAGAACACACTCATCTCTTCATGCATGCTAATATTGATCAGGAATaGAGTGAAGAGTGGGAACAG +
Preference number: 4 (lower is better)
Translates to: KPLAFRDLLEHTHLFMHANIDQE*SEEWEQ
Trigger: CTGTTCCCACTCTTCACTTCATTCCTGATCAATATT...AGCATGCATGAAGAGATGAGTGTGTTCTAATAAGTCTCTGAAAGCCAGTGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251081.8
CDS-3UTR TCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTTTGCATACATCTTCTTaGCTAGCAGCATTTATGTGG +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSLHTSS*LAAFMW
Trigger: CCACATAAATGCTGCTAGTCAAGAAGATGTATGCAA...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTTGCATAACAAATTACTaGCGACAAATCCTAAGTGCG +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSCITNY*RQILSA
Trigger: CGCACTTAGGATTTGTCGTCAGTAATTTGTTATGCA...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAACGCCTGTAGTTGGATaGATAGAAAATAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRTPVVG*IENRVG
Trigger: ACCCACCCTATTTTCTATGCATCCAACTACAGGCGT...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGACACTCATCTCTTCATaGATGCTTCTGCTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWTLISS*MLLLVS
Trigger: GGACACTAGCAGAAGCATGCATGAAGAGATGAGTGT...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCAATTGTAATAGTCAATaGCTGGCTAGAAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLNCNSQ*LARNLP
Trigger: AGGGAGATTTCTAGCCAGGCATTGACTATTACAATT...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCTATTATTATCAGGAGTaGCTTTTAGGTGGACCGCTC +
Preference number: 4 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTYYYQE*LLGGPL
Trigger: GAGCGGTCCACCTAAAAGGCACTCCTGATAATAATA...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCAAGGCTACATATGACTaGACTGGGAAGGCATCAAAT +
Preference number: 4 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTKATYD*TGKASN
Trigger: ATTTGATGCCTTCCCAGTGCAGTCATATGTAGCCTT...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTACCTTGCCATTTCCCATaGACCAACTATCACTCCATA +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILPCHFP*TNYHSI
Trigger: TATGGAGTGATAGTTGGTGCATGGGAAATGGCAAGG...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTTTTTGCAGGCATCACTaGCAAATATTAAGATCGCGA +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSFCRHH*QILRSR
Trigger: TCGCGATCTTAATATTTGCCAGTGATGCCTGCAAAA...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGAAATTCCGAGGTTCTTaGTCAACTCCAGGACCTCTT +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWKFRGS*STPGPL
Trigger: AAGAGGTCCTGGAGTTGACCAAGAACCTCGGAATTT...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCAAAGAACTCCTTCATTaGTTTTGGCATCTGTTACAA +
Preference number: 4 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLKELLH*FWHLLQ
Trigger: TTGTAACAGATGCCAAAACCAATGAAGGAGTTCTTT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGCTTTCACCATTTCGATaGTCTCCTGACCTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWLSPFR*SPDLRF
Trigger: AAAACGGAGGTCAGGAGACCATCGAAATGGTGAAAG...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTAGCAGTAAAGCAGAGTaGAGACTGAAGCTAAATTGT +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSSSKAE*RLKLNC
Trigger: ACAATTTAGCTTCAGTCTCCACTCTGCTTTACTGCT...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTTATCACACTGACTTCTaGCTAGGGATGAATAAGATG +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLYHTDF*LGMNKM
Trigger: CATCTTATTCATCCCTAGCCAGAAGTCAGTGTGATA...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGGTCAAGACTTCAATCTaGAGTCCAGGAATGGAGATG +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWVKTSI*SPGMEM
Trigger: CATCTCCATTCCTGGACTCCAGATTGAAGTCTTGAC...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATCAAGCCTAAGTAAGTaGAAGAAGGGCACCATTGTG +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILSSLSK*KKGTIV
Trigger: CACAATGGTGCCCTTCTTCCACTTACTTAGGCTTGA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGAACCTCATGAATGCTTaGATTGGGAGTAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWNLMNA*IGSSRS
Trigger: GCTTCTGCTACTCCCAATCCAAGCATTCATGAGGTT...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGTCTCCCTTTGCACAGTaGAAAGGTCACATTACAAGA +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWSPFAQ*KGHITR
Trigger: TCTTGTAATGTGACCTTTTCACTGTGCAAAGGGAGA...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCTGCCAACTCTTTTCATaGATTAACTCTGACAAAGCC +
Preference number: 4 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTCQLFS*INSDKA
Trigger: GGCTTTGTCAGAGTTAATTCATGAAAAGAGTTGGCA...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGACAAGATTTATCACACTaGCTTCTGGCTAGGGATGAA +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRQDLSH*LLARDE
Trigger: TTCATCCCTAGCCAGAAGTCAGTGTGATAAATCTTG...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGCAAGATTTATCACACTaGCTTCTGGCTAGGGATGAA +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWQDLSH*LLARDE
Trigger: TTCATCCCTAGCCAGAAGTCAGTGTGATAAATCTTG...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGATCGGGAAACTCTTTATaGTTTTGCCTCCTCGAGAAT +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRSGNSL*FCLLEN
Trigger: ATTCTCGAGGAGGCAAAATCATAAAGAGTTTCCCGA...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGATAGGCATGCAATTGTaGACACCTTTCTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWIGMQL*TPFLVL
Trigger: AAGGACCAAGAAAGGTGTTCACAATTGCATGCCTAT...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTGTAATGTCACATTTTTaGAGGCATCACTGGCAAATA +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSVMSHF*RHHWQI
Trigger: TATTTGCCAGTGATGCCTGCAAAAATGTGACATTAC...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAATTTTTGATGGTCTCTaGCTCTCTATCCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRIFDGL*LSIQAS
Trigger: AGAAGCCTGGATAGAGAGGCAGAGACCATCAAAAAT...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGATTTTTGATGGTCTCTaGCTCTCTATCCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWIFDGL*LSIQAS
Trigger: AGAAGCCTGGATAGAGAGGCAGAGACCATCAAAAAT...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTAATTGTAATAGTCAATaGCTGGCTAGAAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLNCNSQ*LARNLP
Trigger: AGGGAGATTTCTAGCCAGGCATTGACTATTACAATT...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAAAAGAAGCAGATGTTCTaGTTTTCATCCAATTTGAAC +
Preference number: 4 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQKKQMF*FSSNLN
Trigger: GTTCAAATTGGATGAAAAGCAGAACATCTGCTTCTT...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTTGGAACAGAAGATCTTaGTGCTTTTCATTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLWNRRS*CFSFAE
Trigger: TTCAGCAAATGAAAAGCAGCAAGATCTTCTGTTCCA...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGGGCTTGAGAAGAATATaGTCCAAATCCATGACACAG +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWGLRRI*SKSMTQ
Trigger: CTGTGTCATGGATTTGGAGCATATTCTTCTCAAGCC...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGTGTGTGGCTTTGTTCTaGATTCCTACCTTAAGACTA +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFECVALF*IPTLRL
Trigger: TAGTCTTAAGGTAGGAATGCAGAACAAAGCCACACA...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGGCATGGAGAATGCGATaGATTGTGCAAAGATTAACT +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFEAWRMR*IVQRLT
Trigger: AGTTAATCTTTGCACAATGCATCGCATTCTCCATGC...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGTCTCGGCATCTAGTTTaGAGGGAACATGTAATGTCA +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWSRHLV*REHVMS
Trigger: TGACATTACATGTTCCCTCCAAACTAGATGCCGAGA...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGTGGAGTATACCCATCTaGAGTTGTTGCAAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWWSIPI*SCCKGN
Trigger: ATTGCCTTTGCAACAACTCCAGATGGGTATACTCCA...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTGCTACTTCTTGTTTCTaGGTCATATGCTTTATATCC +
Preference number: 4 (lower is better)
Translates to: STLLSTGPISKETKHRKLATSCF*VICFIS
Trigger: GGATATAAAGCATATGACCCAGAAACAAGAAGTAGC...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAGTAATAGTCAATGCCTaGCTAGAAATCTCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILVIVNA*LEISLC
Trigger: GCAAAGGGAGATTTCTAGCCAGGCATTGACTATTAC...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAATCTGGAGTCCAGGAATaGAGATGGAGACAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWESGVQE*RWRQKG
Trigger: TCCCTTTTGTCTCCATCTCCATTCCTGGACTCCAGA...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGATGTTAGGCATACAGTaGTCAAGAAGACAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWMLGIQ*SRRQRR
Trigger: TCTCCTCTGTCTTCTTGACCACTGTATGCCTAACAT...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGAACAAAGCTGAGATTTaGATCCACGTCTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFENKAEI*IHVFLT
Trigger: AGTCAGAAAGACGTGGATCCAAATCTCAGCTTTGTT...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATTATCATTCACGTCTTaGAGTATAATGCCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILLSFTS*SIMPSV
Trigger: GACACTGGGCATTATACTTCAAGACGTGAATGATAA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCTATAGGTACTACATATaGGCCAAATGGAGGATCATT +
Preference number: 4 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTYRYYI*AKWRII
Trigger: AATGATCCTCCATTTGGCTCATATGTAGTACCTATA...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAAATTTCGATGGTCTCCTaGCCTCCGTTTTTGATTCCT +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWEISMVS*PPFLIP
Trigger: AGGAATCAAAAACGGAGGTCAGGAGACCATCGAAAT...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGCCCAATCTTGTGAATTaGAGACAGGCACATTATAGA +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWPNLVN*RQAHYR
Trigger: TCTATAATGTGCCTGTCTTCAATTCACAAGATTGGG...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAAACCTGGAAGCTACTATaGGCCATGAAATTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWETWKLL*AMKFPK
Trigger: CTTTGGGAATTTCATGGCTCATAGTAGCTTCCAGGT...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGATGGGAAGGCATCAAATaGCTACAGTACAAACAAAGT +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRWEGIK*LQYKQS
Trigger: ACTTTGTTTGTACTGTAGTCATTTGATGCCTTCCCA...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAGTGTTATCTTCCAAGTaGCATTATCAGTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILVLSSK*HYQFTA
Trigger: TGCTGTGAACTGATAATGTCACTTGGAAGATAACAC...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGGTGTTATCTTCCAAGTaGCATTATCAGTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWVLSSK*HYQFTA
Trigger: TGCTGTGAACTGATAATGTCACTTGGAAGATAACAC...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATTGCATACATCTTCTTaGCTAGCAGCATTTATGTGG +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILLHTSS*LAAFMW
Trigger: CCACATAAATGCTGCTAGTCAAGAAGATGTATGCAA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGGATATGCTAGAAATTTaGGGTTTCTGTGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFEDMLEI*GFCDFP
Trigger: TGGGAAATCACAGAAACCTCAAATTTCTAGCATATC...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGAAGACCAAAAGCACATaGATGCACTCAGTTATGATA +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFEKTKST*MHSVMI
Trigger: TATCATAACTGAGTGCATTCATGTGCTTTTGGTCTT...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCGTAATGTCACATTTTTaGAGGCATCACTGGCAAATA +
Preference number: 4 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTVMSHF*RHHWQI
Trigger: TATTTGCCAGTGATGCCTGCAAAAATGTGACATTAC...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTACCCATCTGGAGTTGTTaGAAAGGCAATTATCTCAAA +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILPIWSC*KGNYLK
Trigger: TTTGAGATAATTGCCTTTGCAACAACTCCAGATGGG...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATGTTGTTCCCACTTCTaGATTTTCTTTCATGCGAAC +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILCCSHF*IFFHAN
Trigger: GTTCGCATGAAAGAAAATGCAGAAGTGGGAACAACA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGTATACCTTATGCCACTaGTACTTCTTGTTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWYTLCH*YFLFLG
Trigger: ACCCAGAAACAAGAAGTAGCAGTGGCATAAGGTATA...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTATAGGAAAGACGTGCTaGTGTATCATTAATTGCTTT +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSIGKTC*CIINCF
Trigger: AAAGCAATTAATGATACAGCAGCACGTCTTTCCTAT...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGGATGCAAAAGAGCAATaGTATGCCCAACAATATTGC +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWDAKEQ*YAQQYC
Trigger: GCAATATTGTTGGGCATAGCATTGCTCTTTTGCATC...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAGATACAATTAGGTTCTaGTGGGCTAAATCATCAGGA +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILDTIRF*WAKSSG
Trigger: TCCTGATGATTTAGCCCAGCAGAACCTAATTGTATC...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGCTAGAAATCTCCCTTTaGACAGTGAAAAGGTCACAT +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWLEISL*TVKRSH
Trigger: ATGTGACCTTTTCACTGTGCAAAGGGAGATTTCTAG...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAGATAGAGCCGGAATTTaGATCAAGACACTCTTACTT +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILDRAGI*IKTLLL
Trigger: AAGTAAGAGTGTCTTGATGCAAATTCCGGCTCTATC...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAACCTTGCCATTTCCCATaGACCAACTATCACTCCATA +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWEPCHFP*TNYHSI
Trigger: TATGGAGTGATAGTTGGTGCATGGGAAATGGCAAGG...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGGCATGGAGAATGCGATaGATTGTGCAAAGATTAACT +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWAWRMR*IVQRLT
Trigger: AGTTAATCTTTGCACAATGCATCGCATTCTCCATGC...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTTTATGGAATAGTATATaGTATAGTTTTGGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: KEIGEISTEGPQLKMARSLWNSI*YSFGPC
Trigger: ACACGGCCCAAAACTATACCATATACTATTCCATAA...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGTTTCATCCTCTATTTTaGTTATTAGGGGCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWFHPLF*LLGAVE
Trigger: TTCCACTGCCCCTAATAATCAAAATAGAGGATGAAA...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATATAGGTACTACATATaGGCCAAATGGAGGATCATT +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILYRYYI*AKWRII
Trigger: AATGATCCTCCATTTGGCTCATATGTAGTACCTATA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAATCGGGAAACTCTTTATaGTTTTGCCTCCTCGAGAAT +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWESGNSL*FCLLEN
Trigger: ATTCTCGAGGAGGCAAAATCATAAAGAGTTTCCCGA...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAGTAATGTCACATTTTTaGAGGCATCACTGGCAAATA +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILVMSHF*RHHWQI
Trigger: TATTTGCCAGTGATGCCTGCAAAAATGTGACATTAC...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGTGCTGTATCATTAATTaGTTTCAGTCTCCACATTCT +
Preference number: 4 (lower is better)
Translates to: QLLVATSRFVQLLVVGFECCIIN*FQSPHS
Trigger: AGAATGTGGAGACTGAAAGCAATTAATGATACAGCA...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAAAAGGCTACATATGACTaGACTGGGAAGGCATCAAAT +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWEKATYD*TGKASN
Trigger: ATTTGATGCCTTCCCAGTGCAGTCATATGTAGCCTT...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGGGTGTCAAAGAAATATaGATTCAGCATTCTCCTACA +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWGVKEI*IQHSPT
Trigger: TGTAGGAGAATGCTGAATGCATATTTCTTTGACACC...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGCTCCAGGACCTCTTATaGAATAGTATATGGTATAGT +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWLQDLL*NSIWYS
Trigger: ACTATACCATATACTATTCCATAAGAGGTCCTGGAG...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGACAATTAGGTTCTGCTaGGCTAAATCATCAGGAATT +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWTIRFC*AKSSGI
Trigger: AATTCCTGATGATTTAGCCCAGCAGAACCTAATTGT...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR TCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAAACACAAACCTGTAGATaGAAACTTTACAGCCATGTG +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWETQTCR*KLYSHV
Trigger: CACATGGCTGTAAAGTTTTCATCTACAGGTTTGTGT...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAATCAAAAGATTCATACTaGTCACGATCTACAGGACGA +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWESKDSY*SRSTGR
Trigger: TCGTCCTGTAGATCGTGAGCAGTATGAATCTTTTGA...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAACCCATCTGGAGTTGTTaGAAAGGCAATTATCTCAAA +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWEPIWSC*KGNYLK
Trigger: TTTGAGATAATTGCCTTTGCAACAACTCCAGATGGG...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAATGTTGTTCCCACTTCTaGATTTTCTTTCATGCGAAC +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWECCSHF*IFFHAN
Trigger: GTTCGCATGAAAGAAAATGCAGAAGTGGGAACAACA...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATGCTGTATCATTAATTaGTTTCAGTCTCCACATTCT +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILCCIIN*FQSPHS
Trigger: AGAATGTGGAGACTGAAAGCAATTAATGATACAGCA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGATAGGAAAGACGTGCTaGTGTATCATTAATTGCTTT +
Preference number: 4 (lower is better)
Translates to: DVQENNSFQAPHEHLINWIGKTC*CIINCF
Trigger: AAAGCAATTAATGATACAGCAGCACGTCTTTCCTAT...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR GCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAAAAAGTAATAGGTTCTaGTTCTTAGCTATTGATGGG +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRKSNRF*FLAIDG
Trigger: CCCATCAATAGCTAAGAAGCAGAACCTATTACTTTT...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CCA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATTATGGAATAGTATATaGTATAGTTTTGGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILLWNSI*YSFGPC
Trigger: ACACGGCCCAAAACTATACCATATACTATTCCATAA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CCA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGATTAGGATATACCAAATaGCTTGAGAAGAATATGCTC +
Preference number: 4 (lower is better)
Translates to: KFEVSVISQGNTARTKLRLGYTK*LEKNML
Trigger: GAGCATATTCTTCTCAAGCCATTTGGTATATCCTAA...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR TCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAAGATATGCTAGAAATTTaGGGTTTCTGTGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWEDMLEI*GFCDFP
Trigger: TGGGAAATCACAGAAACCTCAAATTTCTAGCATATC...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR GCA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAAATAGGAAAGACGTGCTaGTGTATCATTAATTGCTTT +
Preference number: 4 (lower is better)
Translates to: RFGKTELGSKIKTVLRWEIGKTC*CIINCF
Trigger: AAAGCAATTAATGATACAGCAGCACGTCTTTCCTAT...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS CCA 90 bp GGCAGAGGGCTCCGTTCCAGGAGCCGGAGGGGCGGGCTGCCTCCATaGAGAGGGCTCGGGGCAGGTCGCGGGCCGAGCGTCGGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: GRGLRSRSRRGGLPP*RGLGAGRGPSVGPG
Trigger: CCCCGGCCCGACGCTCGGCCCGCGACCTGCCCCGAGCCCTCTCCATGGAGGCAGCCCGCCCCTCCGGCTCCTGGAACGGAGCCCTCTGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS GCA 90 bp GAGCAGCCGGCAGAGGGCTCCGTTCCAGGAGCCGGAGGGGCGGGCTaGCTCCATGGAGAGGGCTCGGGGCAGGTCGCGGGCCGAGCGTCG +
Preference number: 5 (lower is better)
Translates to: EQPAEGSVPGAGGAG*LHGEGSGQVAGRAS
Trigger: CGACGCTCGGCCCGCGACCTGCCCCGAGCCCTCTCCATGGAGGCAGCCCGCCCCTCCGGCTCCTGGAACGGAGCCCTCTGCCGGCTGCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS GCA 90 bp CAAATATTAAGATTCCTGAGTGCGCGGTCGGCCCCGGCTCCGCCCTaGCCGCTGCCCTCGGCGACGGCCGTGGTCCCTGCCCTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: QILRFLSARSAPAPP*PLPSATAVVPALGS
Trigger: TGACCCCAGGGCAGGGACCACGGCCGTCGCCGAGGGCAGCGGGCAGGGCGGAGCCGGGGCCGACCGCGCACTCAGGAATCTTAATATTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648081.1
CDS GCA 90 bp AGAAAGCCACGGGTGGGAACTCCCTCTCGCCGCCACCCTTTTACCTaGGCAAGGTGTTTCTCACCAGCGGACGCCACCTATAAGGCCCAT +
Preference number: 5 (lower is better)
Translates to: RKPRVGTPSRRHPFT*ARCFSPADATYKAH
Trigger: ATGGGCCTTATAGGTGGCGTCCGCTGGTGAGAAACACCTTGCGCAGGTAAAAGGGTGGCGGCGAGAGGGAGTTCCCACCCGTGGCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS GCA 90 bp GGTGATGGTGGCACCTGCCCAATGATGGAGTACTTCAGGCGTGTGTaGATCGTGTCAGGCTCATCTTTGTCAGTAGCACACACTTGTCCC +
Preference number: 5 (lower is better)
Translates to: GDGGTCPMMEYFRRV*IVSGSSLSVAHTCP
Trigger: GGGACAAGTGTGTGCTACTGACAAAGATGAGCCTGACACGATGCACACACGCCTGAAGTACTCCATCATTGGGCAGGTGCCACCATCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS-3UTR CAA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGAGAAGCGCCCACAGTTaGGGTTGTGAAGCCATTCGC +
Preference number: 5 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQRSAHS*GCEAIR
Trigger: GCGAATGGCTTCACAACCCAAACTGTGGGCGCTTCT...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAATCTGAACCTTGCCTGTaGGGCCCCAAGGGACCCAAA +
Preference number: 5 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQSEPCL*GPKGPK
Trigger: TTTGGGTCCCTTGGGGCCCAACAGGCAAGGTTCAGA...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGAGAAGCGCCCACAGTTaGGGTTGTGAAGCCATTCGC +
Preference number: 5 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWERSAHS*GCEAIR
Trigger: GCGAATGGCTTCACAACCCAAACTGTGGGCGCTTCT...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACTGGGAGTTTTCCAATaGGCCCTGTTCCCAGGGGAA +
Preference number: 5 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQLGVFQ*ALFPGE
Trigger: TTCCCCTGGGAACAGGGCCAATTGGAAAACTCCCAG...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCGGAGCCCATCTTCTCTaGGCGCGCCTTAGAACTTTT +
Preference number: 5 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFGAHLL*ARLRTF
Trigger: AAAAGTTCTAAGGCGCGCCAAGAGAAGATGGGCTCC...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAGACCGCTCTGTTAGGTaGCATGGAGAATGCGATGCA +
Preference number: 5 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQDRSVR*HGECDA
Trigger: TGCATCGCATTCTCCATGCAACCTAACAGAGCGGTC...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCGTCAGTAGCACACACTaGTCCCACAGTAGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLVSSTH*SHSSAH
Trigger: GTGGGCACTACTGTGGGACAAGTGTGTGCTACTGAC...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGGTCAGTAGCACACACTaGTCCCACAGTAGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: GDKREARSQSQIWQNRIGVSSTH*SHSSAH
Trigger: GTGGGCACTACTGTGGGACAAGTGTGTGCTACTGAC...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCGGCCCACTTTCCAAGTaGTACTCCTCCACCGCCAAT +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLGPLSK*YSSTAN
Trigger: ATTGGCGGTGGAGGAGTACAACTTGGAAAGTGGGCC...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTCCACCGTGTCTTGACTaGCATTCAAGTGTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTPPCLD*HSSVWV
Trigger: CACCCACACACTTGAATGCAAGTCAAGACACGGTGG...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGAGTGATGCCAAACAGTaGCTGCCTTCTGGACAGTCA +
Preference number: 5 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWESDAKQ*LPSGQS
Trigger: TGACTGTCCAGAAGGCAGCAACTGTTTGGCATCACT...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCTGCGAACAGTCTGTATaGGAGGGTTACACTCAGGGC +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLCEQSV*EGYTQG
Trigger: GCCCTGAGTGTAACCCTCCAATACAGACTGTTCGCA...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGGATGACATGGTGGGTTaGCAGATGATCACTGTCTTT +
Preference number: 5 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQDDMVG*QMITVF
Trigger: AAAGACAGTGATCATCTGCAAACCCACCATGTCATC...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAAAGCCCATCTTCTTCTaGTCGTTCACTGCAACAACC +
Preference number: 5 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQKPIFF*SFTATT
Trigger: GGTTGTTGCAGTGAACGACAAGAAGAAGATGGGCTT...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCCTTGCTGCTTTTCATTaGCTGAAGAAGCACCAGCCA +
Preference number: 5 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFLAAFH*LKKHQP
Trigger: TGGCTGGTGCTTCTTCAGCAAATGAAAAGCAGCAAG...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGTACATCCACCGTGTCTaGACTTGCATTCAAGTGTGT +
Preference number: 5 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQYIHRV*TCIQVC
Trigger: ACACACTTGAATGCAAGTCAAGACACGGTGGATGTA...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCCTGGGAGTTTTCCAATaGGCCCTGTTCCCAGGGGAA +
Preference number: 5 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLLGVFQ*ALFPGE
Trigger: TTCCCCTGGGAACAGGGCCAATTGGAAAACTCCCAG...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGTTCTCGGCATCTAGTTaGGAGGGAACATGTAATGTC +
Preference number: 5 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEFSASS*EGTCNV
Trigger: GACATTACATGTTCCCTCCAAACTAGATGCCGAGAA...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAATGCGAACAGTCTGTATaGGAGGGTTACACTCAGGGC +
Preference number: 5 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQCEQSV*EGYTQG
Trigger: GCCCTGAGTGTAACCCTCCAATACAGACTGTTCGCA...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTGGCCCACTTTCCAAGTaGTACTCCTCCACCGCCAAT +
Preference number: 5 (lower is better)
Translates to: KEIGEISTEGPQLKMARSGPLSK*YSSTAN
Trigger: ATTGGCGGTGGAGGAGTACAACTTGGAAAGTGGGCC...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTCTATGCCCAACAATATaGCAAGGATGGCCCACTTTC +
Preference number: 5 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTLCPTI*QGWPTF
Trigger: GAAAGTGGGCCATCCTTGCAATATTGTTGGGCATAG...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAATTCGCAGAATACACTTaGTCATCTCCAGGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQFAEYT*SSPGAS
Trigger: AGAAGCTCCTGGAGATGACAAAGTGTATTCTGCGAA...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCTGTCAGGACATAGTCTaGGGCATGCTTGTGATTTTC +
Preference number: 5 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFCQDIV*GMLVIF
Trigger: GAAAATCACAAGCATGCCCAAGACTATGTCCTGACA...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCCCACCGTGTCTTGACTaGCATTCAAGTGTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLPPCLD*HSSVWV
Trigger: CACCCACACACTTGAATGCAAGTCAAGACACGGTGG...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAACTTCTGGACAGTCACTaGTTCCACCTGCTGTTGACC +
Preference number: 5 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQLLDSH*FHLLLT
Trigger: GGTCAACAGCAGGTGGAACAAGTGACTGTCCAGAAG...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCTCTGAACCTTGCCTGTaGGGCCCCAAGGGACCCAAA +
Preference number: 5 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTSEPCL*GPKGPK
Trigger: TTTGGGTCCCTTGGGGCCCAACAGGCAAGGTTCAGA...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGTGTAATGTCACATTTTaGCAGGCATCACTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQCNVTF*QASLAN
Trigger: ATTTGCCAGTGATGCCTGCAAAAATGTGACATTACA...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGTTGGGCCGTGTCAGATaGAACCTGTTGAAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: GDKREARSQSQIWQNRIGLGRVR*NLLKEK
Trigger: CTTTTCCTTCAACAGGTTCAATCTGACACGGCCCAA...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGGTATATGGTATAGTTTaGGGCCGTGTCAGATTGAAC +
Preference number: 5 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEVYGIV*GRVRLN
Trigger: GTTCAATCTGACACGGCCCAAAACTATACCATATAC...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGCTTTATATCCATTGCTaGTTGTTCCCACTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQLYIHC*LFPLLH
Trigger: ATGCAGAAGTGGGAACAACAAGCAATGGATATAAAG...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCCTATGCCCAACAATATaGCAAGGATGGCCCACTTTC +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLLCPTI*QGWPTF
Trigger: GAAAGTGGGCCATCCTTGCAATATTGTTGGGCATAG...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGTGTATGCCACTTTCTTaGCTTTGTGGTTTCTCAAGA +
Preference number: 5 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQCMPLS*LCGFSR
Trigger: TCTTGAGAAACCACAAAGCAAAGAAAGTGGCATACA...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCGCTCTGTCCTCTCCCTaGAATCCTAACAAAATAAGT +
Preference number: 5 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFALSSP*NPNKIS
Trigger: ACTTATTTTGTTAGGATTCAAGGGAGAGGACAGAGC...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTCTTCTGGACAGTCACTaGTTCCACCTGCTGTTGACC +
Preference number: 5 (lower is better)
Translates to: KEIGEISTEGPQLKMARSLLDSH*FHLLLT
Trigger: GGTCAACAGCAGGTGGAACAAGTGACTGTCCAGAAG...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGATTCTGCATCACATCTaGTGTATATTGACACCCTCT +
Preference number: 5 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQILHHI*CILTPS
Trigger: AGAGGGTGTCAATATACACAAGATGTGATGCAGAAT...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAGTCAGTAGCACACACTaGTCCCACAGTAGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILVSSTH*SHSSAH
Trigger: GTGGGCACTACTGTGGGACAAGTGTGTGCTACTGAC...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp CCTTCTGTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAAGTTATCATTCACGTCTaGAAGTATAATGCCCAGTGT +
Preference number: 5 (lower is better)
Translates to: PSVCPSHYPKGEGIPKSQVIIHV*KYNAQC
Trigger: ACACTGGGCATTATACTTCAAGACGTGAATGATAAC...TTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGACAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGACTCCACCGCCAATCCTaGGATCTACACGATGTGTGC +
Preference number: 5 (lower is better)
Translates to: KFEVSVISQGNTARTKLRLHRQS*DLHDVC
Trigger: GCACACATCGTGTAGATCCAAGGATTGGCGGTGGAG...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTACTCCACCGCCAATCCTaGGATCTACACGATGTGTGC +
Preference number: 5 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILLHRQS*DLHDVC
Trigger: GCACACATCGTGTAGATCCAAGGATTGGCGGTGGAG...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAGGCCCACTTTCCAAGTaGTACTCCTCCACCGCCAAT +
Preference number: 5 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILGPLSK*YSSTAN
Trigger: ATTGGCGGTGGAGGAGTACAACTTGGAAAGTGGGCC...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCTTCGCAGAATACACTTaGTCATCTCCAGGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLFAEYT*SSPGAS
Trigger: AGAAGCTCCTGGAGATGACAAAGTGTATTCTGCGAA...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAAGAAGCGCCCACAGTTaGGGTTGTGAAGCCATTCGC +
Preference number: 5 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILRSAHS*GCEAIR
Trigger: GCGAATGGCTTCACAACCCAAACTGTGGGCGCTTCT...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAAAAGCCCATCTTCTTCTaGTCGTTCACTGCAACAACC +
Preference number: 5 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQKPIFF*SFTATT
Trigger: GGTTGTTGCAGTGAACGACAAGAAGAAGATGGGCTT...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGAAGGATACAAGGAGATaGGGGAAATTAGTACAGAAG +
Preference number: 5 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEKDTRR*GKLVQK
Trigger: CTTCTGTACTAATTTCCCCAATCTCCTTGTATCCTT...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTGTTTTCTGTGTGGCTTaGTTCTGCATTCCTACCTTA +
Preference number: 5 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTVFCVA*FCIPTL
Trigger: TAAGGTAGGAATGCAGAACAAAGCCACACAGAAAAC...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTGGTCGGGCTTCTGGGAAAGGTGAATAAGAGCATCATGGCAAGATGTCAGCAGTTTGCATACATCTTCTaGACTAGCAGCATTTATGTG +
Preference number: 5 (lower is better)
Translates to: LVGLLGKVNKSIMARCQQFAYIF*TSSIYV
Trigger: CACATAAATGCTGCTAGTCAAGAAGATGTATGCAAA...CTGCTGACATCTTGCCATGATGCTCTTATTCACCTTTCCCAGAAGCCCGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AAGCCACTGGCTTTCAGAGACTTATTAGAACACACTCATCTCTTCATGCATGCTAGTGATGCCAAACAGTaGCTGCCTTCTGGACAGTCA +
Preference number: 5 (lower is better)
Translates to: KPLAFRDLLEHTHLFMHASDAKQ*LPSGQS
Trigger: TGACTGTCCAGAAGGCAGCAACTGTTTGGCATCACT...AGCATGCATGAAGAGATGAGTGTGTTCTAATAAGTCTCTGAAAGCCAGTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251081.8
CDS-3UTR CAA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGGACCGCTCTGTTAGGTaGCATGGAGAATGCGATGCA +
Preference number: 5 (lower is better)
Translates to: QLLVATSRFVQLLVVGFEDRSVR*HGECDA
Trigger: TGCATCGCATTCTCCATGCAACCTAACAGAGCGGTC...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS TCA 90 bp ATCACTGTCTTTTTAGGTATGAATGGGCTGTTATCATTCACGTCTTaGAGTATAATGCCCAGTGTCCCCGTACATGTTCTCCCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: ITVFLGMNGLLSFTS*SIMPSVPVHVLPPW
Trigger: CCAAGGAGGGAGAACATGTACGGGGACACTGGGCATTATACTTCAAGACGTGAATGATAACAGCCCATTCATACCTAAAAAGACAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS-3UTR CAA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTTGTAATGTCACATTTTaGCAGGCATCACTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTCNVTF*QASLAN
Trigger: ATTTGCCAGTGATGCCTGCAAAAATGTGACATTACA...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGGGAGCCCATCTTCTCTaGGCGCGCCTTAGAACTTTT +
Preference number: 5 (lower is better)
Translates to: DVQENNSFQAPHEHLINWGAHLL*ARLRTF
Trigger: AAAAGTTCTAAGGCGCGCCAAGAGAAGATGGGCTCC...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCGTATATGGTATAGTTTaGGGCCGTGTCAGATTGAAC +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLVYGIV*GRVRLN
Trigger: GTTCAATCTGACACGGCCCAAAACTATACCATATAC...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCACCCATCTGGAGTTGTaGCAAAGGCAATTATCTCAA +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLTHLEL*QRQLSQ
Trigger: TTGAGATAATTGCCTTTGCAACAACTCCAGATGGGT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTCAAAGAACTCCTTCATaGGTTTTGGCATCTGTTACA +
Preference number: 5 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTQRTPS*VLASVT
Trigger: TGTAACAGATGCCAAAACCAATGAAGGAGTTCTTTG...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATGCGAACAGTCTGTATaGGAGGGTTACACTCAGGGC +
Preference number: 5 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILCEQSV*EGYTQG
Trigger: GCCCTGAGTGTAACCCTCCAATACAGACTGTTCGCA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGTATATCCATTGCTTGTaGTTCCCACTTCTGCATTTT +
Preference number: 5 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEYIHCL*FPLLHF
Trigger: AAAATGCAGAAGTGGGAACAACAAGCAATGGATATA...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTCTATGCCCAACAATATaGCAAGGATGGCCCACTTTC +
Preference number: 5 (lower is better)
Translates to: STLLSTGPISKETKHRKLLCPTI*QGWPTF
Trigger: GAAAGTGGGCCATCCTTGCAATATTGTTGGGCATAG...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCAGGAATTACTTTTGGTaGTTTAGACGTCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLRNYFW*FRRPRS
Trigger: GCTTCTGGGACGTCTAAACAACCAAAAGTAATTCCT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCTTCGCAGAATACACTTaGTCATCTCCAGGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLFAEYT*SSPGAS
Trigger: AGAAGCTCCTGGAGATGACAAAGTGTATTCTGCGAA...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTTCTGTAAATGTGCATTaGACCAAAGAGATTCCATCC +
Preference number: 5 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTSVNVH*TKEIPS
Trigger: GGATGGAATCTCTTTGGTCAAATGCACATTTACAGA...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGCTAATTACACCATTCTaGTTGTTAACACAGAGCACT +
Preference number: 5 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWELITPF*LLTQST
Trigger: AGTGCTCTGTGTTAACAACAAGAATGGTGTAATTAG...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTCTTGCTGCTTTTCATTaGCTGAAGAAGCACCAGCCA +
Preference number: 5 (lower is better)
Translates to: KEIGEISTEGPQLKMARSLAAFH*LKKHQP
Trigger: TGGCTGGTGCTTCTTCAGCAAATGAAAAGCAGCAAG...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCACTATGTGCCAGGCATaGTGTGATGTGTTTTACAGG +
Preference number: 5 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLTMCQA*CDVFYR
Trigger: CCTGTAAAACACATCACACAATGCCTGGCACATAGT...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTAAGGATACAAGGAGATaGGGGAAATTAGTACAGAAG +
Preference number: 5 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTKDTRR*GKLVQK
Trigger: CTTCTGTACTAATTTCCCCAATCTCCTTGTATCCTT...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp GTCTGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCCCTGGGCAATATAATTaGATGAATCAAAATTTGGCC +
Preference number: 5 (lower is better)
Translates to: VCPSHYPKGEGIPKSQHFPGQYN*MNQNLA
Trigger: GGCCAAATTTTGATTCATCAAATTATATTGCCCAGG...GAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGGTGCCTGGGAGGATATACCAAATGGCTaGAGAAGAATATGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: LSEPLIPYWLTHVLGAWEDIPNG*RRICSK
Trigger: TTTGGAGCATATTCTTCTCAAGCCATTTGGTATATC...CTCCCAGGCACCAAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCTGTAATGTCACATTTTaGCAGGCATCACTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLCNVTF*QASLAN
Trigger: ATTTGCCAGTGATGCCTGCAAAAATGTGACATTACA...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp AAGCCACTGGCTTTCAGAGACTTATTAGAACACACTCATCTCTTCATGCATGCTTTCTCGGCATCTAGTTaGGAGGGAACATGTAATGTC +
Preference number: 5 (lower is better)
Translates to: KPLAFRDLLEHTHLFMHAFSASS*EGTCNV
Trigger: GACATTACATGTTCCCTCCAAACTAGATGCCGAGAA...AGCATGCATGAAGAGATGAGTGTGTTCTAATAAGTCTCTGAAAGCCAGTGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251081.8
CDS-3UTR CAA 90 bp TGCCCCTCTCACTATCCCAAGGGAGAAGGGATTCCAAAATCTCAACACTTCACTTTTTCATCCTCTATTTaGATTATTAGGGGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: CPSHYPKGEGIPKSQHFTFSSSI*IIRGSG
Trigger: TCCACTGCCCCTAATAATCAAAATAGAGGATGAAAA...AGTGAAGTGTTGAGATTTTGGAATCCCTTCTCCCTTGGGATAGTGAGAGGGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCCAAAGAACTCCTTCATaGGTTTTGGCATCTGTTACA +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLQRTPS*VLASVT
Trigger: TGTAACAGATGCCAAAACCAATGAAGGAGTTCTTTG...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCCTTTATATCCATTGCTaGTTGTTCCCACTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLLYIHC*LFPLLH
Trigger: ATGCAGAAGTGGGAACAACAAGCAATGGATATAAAG...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAACTCCACCGCCAATCCTaGGATCTACACGATGTGTGC +
Preference number: 5 (lower is better)
Translates to: RFGKTELGSKIKTVLRWELHRQS*DLHDVC
Trigger: GCACACATCGTGTAGATCCAAGGATTGGCGGTGGAG...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCTCTGTAAATGTGCATTaGACCAAAGAGATTCCATCC +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLSVNVH*TKEIPS
Trigger: GGATGGAATCTCTTTGGTCAAATGCACATTTACAGA...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGATTACACCATTCTTGTaGTTAACACAGAGCACTGCT +
Preference number: 5 (lower is better)
Translates to: GDKREARSQSQIWQNRIGITPFL*LTQSTA
Trigger: AGCAGTGCTCTGTGTTAACAACAAGAATGGTGTAAT...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTTACATCCACCGTGTCTaGACTTGCATTCAAGTGTGT +
Preference number: 5 (lower is better)
Translates to: STLLSTGPISKETKHRKLYIHRV*TCIQVC
Trigger: ACACACTTGAATGCAAGTCAAGACACGGTGGATGTA...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTACTATGTGCCAGGCATaGTGTGATGTGTTTTACAGG +
Preference number: 5 (lower is better)
Translates to: KEIGEISTEGPQLKMARSTMCQA*CDVFYR
Trigger: CCTGTAAAACACATCACACAATGCCTGGCACATAGT...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTAATTCACTGCAGTGTTaGAACCTGGCAATGATGAAG +
Preference number: 5 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLNSLQC*NLAMMK
Trigger: CTTCATCATTGCCAGGTTCAAACACTGCAGTGAATT...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTCACATCTTGTGTATATaGACACCCTCTGCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: KEIGEISTEGPQLKMARSHILCI*TPSAPF
Trigger: GAAAGGAGCAGAGGGTGTCAATATACACAAGATGTG...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCATTCTGCATCACATCTaGTGTATATTGACACCCTCT +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLILHHI*CILTPS
Trigger: AGAGGGTGTCAATATACACAAGATGTGATGCAGAAT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCCTGAGACAAACATCCTaGCATGTGAGTAGAATCTTT +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLLRQTS*HVSRIF
Trigger: AAAGATTCTACTCACATGCAAGGATGTTTGTCTCAG...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCAAGGAGCAGCTTAGCTaGCTAAAAAGTGAACACATT +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLKEQLS*LKSEHI
Trigger: AATGTGTTCACTTTTTAGCAAGCTAAGCTGCTCCTT...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS TCA 90 bp TGCTGTATCATTAATTGCTTTCAGTCTCCACATTCTCTGTACTTCTaGAGTAGAACTCTCCAGACTAAAGTCAAAGGGTGGGCCATGGAT +
Preference number: 5 (lower is better)
Translates to: CCIINCFQSPHSLYF*SRTLQTKVKGWAMD
Trigger: ATCCATGGCCCACCCTTTGACTTTAGTCTGGAGAGTTCTACTTCAGAAGTACAGAGAATGTGGAGACTGAAAGCAATTAATGATACAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS TCA 90 bp ACTAGACATGCCAAGTCTATCTCTCACTGTTATAGGTACTACATATaGGCCAAATGGAGGATCATTCTGATAGGAAAGACGTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: TRHAKSISHCYRYYI*AKWRIILIGKTCCC
Trigger: ACAGCAGCACGTCTTTCCTATCAGAATGATCCTCCATTTGGCTCATATGTAGTACCTATAACAGTGAGAGATAGACTTGGCATGTCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS TCA 90 bp TGTGCAGTCATTTTCGGTAATGCAGTCACACAGTGTAACATCCAATaGAGTGACACTAGACATGCCAAGTCTATCTCTCACTGTTATAGG +
Preference number: 5 (lower is better)
Translates to: CAVIFGNAVTQCNIQ*SDTRHAKSISHCYR
Trigger: CCTATAACAGTGAGAGATAGACTTGGCATGTCTAGTGTCACTTCATTGGATGTTACACTGTGTGACTGCATTACCGAAAATGACTGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS-3UTR CAA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATTGGGCCGTGTCAGATaGAACCTGTTGAAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILLGRVR*NLLKEK
Trigger: CTTTTCCTTCAACAGGTTCAATCTGACACGGCCCAA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCTATACCCATCTGGAGTaGTTGCAAAGGCAATTATCT +
Preference number: 5 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLYTHLE*LQRQLS
Trigger: AGATAATTGCCTTTGCAACAACTCCAGATGGGTATA...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCTTTTCATCCTCTATTTaGATTATTAGGGGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLFSSSI*IIRGSG
Trigger: TCCACTGCCCCTAATAATCAAAATAGAGGATGAAAA...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp AGGAGAACCCTTGGGGGTTACATTTCAATATGGGGCAATTATTGGTGGCTACAACAAAGAACTCCTTCATaGGTTTTGGCATCTGTTACA +
Preference number: 5 (lower is better)
Translates to: RRTLGGYISIWGNYWWLQQRTPS*VLASVT
Trigger: TGTAACAGATGCCAAAACCAATGAAGGAGTTCTTTG...TTGTAGCCACCAATAATTGCCCCATATTGAAATGTAACCCCCAAGGGTTCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCTATATCCATTGCTTGTaGTTCCCACTTCTGCATTTT +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLYIHCL*FPLLHF
Trigger: AAAATGCAGAAGTGGGAACAACAAGCAATGGATATA...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTCTTTATATCCATTGCTaGTTGTTCCCACTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLLYIHC*LFPLLH
Trigger: ATGCAGAAGTGGGAACAACAAGCAATGGATATAAAG...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp GGAGACAAAAGGGAAGCCCGTAGTCAAAGTCAGATTTGGCAAAACAGAATTGGGTATGCTTTATATCCATaGCTTGTTGTTCCCACTTCT +
Preference number: 5 (lower is better)
Translates to: GDKREARSQSQIWQNRIGYALYP*LVVPTS
Trigger: AGAAGTGGGAACAACAAGCAATGGATATAAAGCATA...CCCAATTCTGTTTTGCCAAATCTGACTTTGACTACGGGCTTCCCTTTTGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCTTATATATGCCATTTTaGATGGTCTCTGCCTCTCTA +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLLYMPF*MVSASL
Trigger: TAGAGAGGCAGAGACCATCAAAAATGGCATATATAA...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGTGTCAGGACATAGTCTaGGGCATGCTTGTGATTTTC +
Preference number: 5 (lower is better)
Translates to: QLLVATSRFVQLLVVGFECQDIV*GMLVIF
Trigger: GAAAATCACAAGCATGCCCAAGACTATGTCCTGACA...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTGCTAGTGTCCTAAATTaGGGCTCCAAATTATCCAAA +
Preference number: 5 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLASVLN*GSKLSK
Trigger: TTTGGATAATTTGGAGCCCAAATTTAGGACACTAGC...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CTAAGGAAGGGGTCTTACTTCTCTGATTCAGGGAGTGCGAAATCCCTTAAACTCCTAATTACACCATTCTaGTTGTTAACACAGAGCACT +
Preference number: 5 (lower is better)
Translates to: LRKGSYFSDSGSAKSLKLLITPF*LLTQST
Trigger: AGTGCTCTGTGTTAACAACAAGAATGGTGTAATTAG...GAGTTTAAGGGATTTCGCACTCCCTGAATCAGAGAAGTAAGACCCCTTCCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCAGGTTCGTGCAATTATaGGTGGTAGGATTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTRFVQL*VVGFEL
Trigger: CAGCTCAAATCCTACCACCAATAATTGCACGAACCT...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCTTGTTCCACCTGCTGTaGACCTTTCTAGTTCTATTT +
Preference number: 5 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLLFHLL*TFLVLF
Trigger: AAATAGAACTAGAAAGGTCAACAGCAGGTGGAACAA...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTTGGGACTACATATTTTaGAGAGCAGAGGCCATATCT +
Preference number: 5 (lower is better)
Translates to: STLLSTGPISKETKHRKLWDYIF*RAEAIS
Trigger: AGATATGGCCTCTGCTCTCAAAAATATGTAGTCCCA...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCTATATCCATTGCTTGTaGTTCCCACTTCTGCATTTT +
Preference number: 5 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLYIHCL*FPLLHF
Trigger: AAAATGCAGAAGTGGGAACAACAAGCAATGGATATA...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCTTATATATGCCATTTTaGATGGTCTCTGCCTCTCTA +
Preference number: 5 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLLYMPF*MVSASL
Trigger: TAGAGAGGCAGAGACCATCAAAAATGGCATATATAA...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAGATGACATGGTGGGTTaGCAGATGATCACTGTCTTT +
Preference number: 5 (lower is better)
Translates to: KFEVSVISQGNTARTKLRDDMVG*QMITVF
Trigger: AAAGACAGTGATCATCTGCAAACCCACCATGTCATC...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGGATGACATGGTGGGTTaGCAGATGATCACTGTCTTT +
Preference number: 5 (lower is better)
Translates to: DVQENNSFQAPHEHLINWDDMVG*QMITVF
Trigger: AAAGACAGTGATCATCTGCAAACCCACCATGTCATC...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp AAGGAGATTGGGGAAATTAGTACAGAAGGTCCTCAACTTAAGATGGCTCGATCTGCTAGTGTCCTAAATTaGGGCTCCAAATTATCCAAA +
Preference number: 5 (lower is better)
Translates to: KEIGEISTEGPQLKMARSASVLN*GSKLSK
Trigger: TTTGGATAATTTGGAGCCCAAATTTAGGACACTAGC...AGATCGAGCCATCTTAAGTTGAGGACCTTCTGTACTAATTTCCCCAATCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAGCTAGAAATCTCCCTTaGCACAGTGAAAAGGTCACA +
Preference number: 5 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILARNLP*HSEKVT
Trigger: TGTGACCTTTTCACTGTGCAAAGGGAGATTTCTAGC...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCAATTCACTGCAGTGTTaGAACCTGGCAATGATGAAG +
Preference number: 5 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTNSLQC*NLAMMK
Trigger: CTTCATCATTGCCAGGTTCAAACACTGCAGTGAATT...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTCCTATTCTCTACTTCTaGTGTGAAGATTTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLPILYF*CEDFLL
Trigger: GAGAAGAAAATCTTCACACAAGAAGTAGAGAATAGG...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TTTCATGAATTAACTCTGACAAAGCCCTGTCAAGTAGACTCCTCTACCCTCCTCCCTATTCTCTACTTCTaGTGTGAAGATTTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: FHELTLTKPCQVDSSTLLPILYF*CEDFLL
Trigger: GAGAAGAAAATCTTCACACAAGAAGTAGAGAATAGG...GAGGAGGGTAGAGGAGTCTACTTGACAGGGCTTTGTCAGAGTTAATTCATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TTTCACCTCTGGCTTTCTGAGCCTCTCATTCCCTATTGGTTAACTCATGTCCTTTTTGCATACATCTTCTaGACTAGCAGCATTTATGTG +
Preference number: 5 (lower is better)
Translates to: FHLWLSEPLIPYWLTHVLFAYIF*TSSIYV
Trigger: CACATAAATGCTGCTAGTCAAGAAGATGTATGCAAA...AAGGACATGAGTTAACCAATAGGGAATGAGAGGCTCAGAAAGCCAGAGGTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTAAGGAGCAGCTTAGCTaGCTAAAAAGTGAACACATT +
Preference number: 5 (lower is better)
Translates to: STLLSTGPISKETKHRKLKEQLS*LKSEHI
Trigger: AATGTGTTCACTTTTTAGCAAGCTAAGCTGCTCCTT...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS CCA 90 bp CATAAAATAAATTCCGAGGTTCTTGGTCAACTCCAGGACCTCTTATaGAATAGTATATGGTATAGTTTTGGGCCGTGTCAGATTGAACCT +
Preference number: 5 (lower is better)
Translates to: HKINSEVLGQLQDLL*NSIWYSFGPCQIEP
Trigger: AGGTTCAATCTGACACGGCCCAAAACTATACCATATACTATTCCATAAGAGGTCCTGGAGTTGACCAAGAACCTCGGAATTTATTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS-3UTR CAA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAGTATATGGTATAGTTTaGGGCCGTGTCAGATTGAAC +
Preference number: 5 (lower is better)
Translates to: KFEVSVISQGNTARTKLRVYGIV*GRVRLN
Trigger: GTTCAATCTGACACGGCCCAAAACTATACCATATAC...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGACCCATCTGGAGTTGTaGCAAAGGCAATTATCTCAA +
Preference number: 5 (lower is better)
Translates to: DVQENNSFQAPHEHLINWTHLEL*QRQLSQ
Trigger: TTGAGATAATTGCCTTTGCAACAACTCCAGATGGGT...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCTATACCCATCTGGAGTaGTTGCAAAGGCAATTATCT +
Preference number: 5 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTYTHLE*LQRQLS
Trigger: AGATAATTGCCTTTGCAACAACTCCAGATGGGTATA...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTTTTTCATCCTCTATTTaGATTATTAGGGGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: STLLSTGPISKETKHRKLFSSSI*IIRGSG
Trigger: TCCACTGCCCCTAATAATCAAAATAGAGGATGAAAA...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp TCTACCCTCCTCAGTACAGGTCCTATAAGTAAGGAAACTAAGCACAGAAAGCTTTATGCTTTATATCCATaGCTTGTTGTTCCCACTTCT +
Preference number: 5 (lower is better)
Translates to: STLLSTGPISKETKHRKLYALYP*LVVPTS
Trigger: AGAAGTGGGAACAACAAGCAATGGATATAAAGCATA...AAGCTTTCTGTGCTTAGTTTCCTTACTTATAGGACCTGTACTGAGGAGGGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGAGGAATTACTTTTGGTaGTTTAGACGTCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: DVQENNSFQAPHEHLINWRNYFW*FRRPRS
Trigger: GCTTCTGGGACGTCTAAACAACCAAAAGTAATTCCT...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAAGGAATTACTTTTGGTaGTTTAGACGTCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: KFEVSVISQGNTARTKLRRNYFW*FRRPRS
Trigger: GCTTCTGGGACGTCTAAACAACCAAAAGTAATTCCT...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAAATATGGGGCAATTATaGGTGGCTACAAGTAGGTTC +
Preference number: 5 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILNMGQL*VATSRF
Trigger: GAACCTACTTGTAGCCACCAATAATTGCCCCATATT...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCTGTATGCCACTTTCTTaGCTTTGTGGTTTCTCAAGA +
Preference number: 5 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTCMPLS*LCGFSR
Trigger: TCTTGAGAAACCACAAAGCAAAGAAAGTGGCATACA...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGGCTCTGTCCTCTCCCTaGAATCCTAACAAAATAAGT +
Preference number: 5 (lower is better)
Translates to: DVQENNSFQAPHEHLINWALSSP*NPNKIS
Trigger: ACTTATTTTGTTAGGATTCAAGGGAGAGGACAGAGC...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGAGTTTTCTGTGTGGCTTaGTTCTGCATTCCTACCTTA +
Preference number: 5 (lower is better)
Translates to: KFEVSVISQGNTARTKLRVFCVA*FCIPTL
Trigger: TAAGGTAGGAATGCAGAACAAAGCCACACAGAAAAC...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCCTGAGACAAACATCCTaGCATGTGAGTAGAATCTTT +
Preference number: 5 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTLRQTS*HVSRIF
Trigger: AAAGATTCTACTCACATGCAAGGATGTTTGTCTCAG...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGATGGGACTACATATTTTaGAGAGCAGAGGCCATATCT +
Preference number: 5 (lower is better)
Translates to: KFEVSVISQGNTARTKLRWDYIF*RAEAIS
Trigger: AGATATGGCCTCTGCTCTCAAAAATATGTAGTCCCA...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATATACCCATCTGGAGTaGTTGCAAAGGCAATTATCT +
Preference number: 5 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILYTHLE*LQRQLS
Trigger: AGATAATTGCCTTTGCAACAACTCCAGATGGGTATA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTAGTTATCATTCACGTCTaGAAGTATAATGCCCAGTGT +
Preference number: 5 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILVIIHV*KYNAQC
Trigger: ACACTGGGCATTATACTTCAAGACGTGAATGATAAC...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGGCTAGTGTCCTAAATTaGGGCTCCAAATTATCCAAA +
Preference number: 5 (lower is better)
Translates to: DVQENNSFQAPHEHLINWASVLN*GSKLSK
Trigger: TTTGGATAATTTGGAGCCCAAATTTAGGACACTAGC...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATCTGTAAATGTGCATTaGACCAAAGAGATTCCATCC +
Preference number: 5 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILSVNVH*TKEIPS
Trigger: GGATGGAATCTCTTTGGTCAAATGCACATTTACAGA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAAGCTAGAAATCTCCCTTaGCACAGTGAAAAGGTCACA +
Preference number: 5 (lower is better)
Translates to: RFGKTELGSKIKTVLRWEARNLP*HSEKVT
Trigger: TGTGACCTTTTCACTGTGCAAAGGGAGATTTCTAGC...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCTGTGGTAGTATGTGTTaGTCTTTTTGCATGAGTTTG +
Preference number: 5 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTCGSMC*SFCMSL
Trigger: CAAACTCATGCAAAAAGACAAACACATACTACCACA...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CAATTATTGGTGGCTACAAGTAGGTTCGTGCAATTATTGGTGGTAGGATTTGAGTGTGGTAGTATGTGTTaGTCTTTTTGCATGAGTTTG +
Preference number: 5 (lower is better)
Translates to: QLLVATSRFVQLLVVGFECGSMC*SFCMSL
Trigger: CAAACTCATGCAAAAAGACAAACACATACTACCACA...CTCAAATCCTACCACCAATAATTGCACGAACCTACTTGTAGCCACCAATAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCCCTGGGCAATATAATTaGATGAATCAAAATTTGGCC +
Preference number: 5 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTPGQYN*MNQNLA
Trigger: GGCCAAATTTTGATTCATCAAATTATATTGCCCAGG...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAAAGGTTCGTGCAATTATaGGTGGTAGGATTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: RFGKTELGSKIKTVLRWERFVQL*VVGFEL
Trigger: CAGCTCAAATCCTACCACCAATAATTGCACGAACCT...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AGCTTCTTGGAAGAAAGATCAGATCCTACTTCTCAAGATTTCAGTCCTCAAACCGATATACCAAATGGCTaGAGAAGAATATGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: SFLEERSDPTSQDFSPQTDIPNG*RRICSK
Trigger: TTTGGAGCATATTCTTCTCAAGCCATTTGGTATATC...GGTTTGAGGACTGAAATCTTGAGAAGTAGGATCTGATCTTTCTTCCAAGAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp AAATTTGAGGTTTCTGTGATTTCCCAAGGTAACACAGCAAGAACAAAGCTGAGATTGTTCCACCTGCTGTaGACCTTTCTAGTTCTATTT +
Preference number: 5 (lower is better)
Translates to: KFEVSVISQGNTARTKLRLFHLL*TFLVLF
Trigger: AAATAGAACTAGAAAGGTCAACAGCAGGTGGAACAA...TCTCAGCTTTGTTCTTGCTGTGTTACCTTGGGAAATCACAGAAACCTCAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGCCAACAGAGAGATCTTaGTTTGATGCTCCAAAAAGA +
Preference number: 5 (lower is better)
Translates to: DVQENNSFQAPHEHLINWPTERS*FDAPKR
Trigger: TCTTTTTGGAGCATCAAACAAAGATCTCTCTGTTGG...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648081.1
CDS-3UTR CAA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTATATGCTTTATATCCATaGCTTGTTGTTCCCACTTCT +
Preference number: 5 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILYALYP*LVVPTS
Trigger: AGAAGTGGGAACAACAAGCAATGGATATAAAGCATA...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp GATGTTCAGGAAAACAACAGTTTCCAAGCACCACATGAACACTTAATTAACTGGTTATATATGCCATTTTaGATGGTCTCTGCCTCTCTA +
Preference number: 5 (lower is better)
Translates to: DVQENNSFQAPHEHLINWLYMPF*MVSASL
Trigger: TAGAGAGGCAGAGACCATCAAAAATGGCATATATAA...CCAGTTAATTAAGTGTTCATGTGGTGCTTGGAAACTGTTGTTTTCCTGAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTACTAATTACACCATTCTaGTTGTTAACACAGAGCACT +
Preference number: 5 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILLITPF*LLTQST
Trigger: AGTGCTCTGTGTTAACAACAAGAATGGTGTAATTAG...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
CDS-3UTR CAA 90 bp AGATTTGGCAAAACAGAATTGGGATCCAAGATAAAAACAGTCTTAAGATGGGAAAATATGGGGCAATTATaGGTGGCTACAAGTAGGTTC +
Preference number: 5 (lower is better)
Translates to: RFGKTELGSKIKTVLRWENMGQL*VATSRF
Trigger: GAACCTACTTGTAGCCACCAATAATTGCCCCATATT...TTCCCATCTTAAGACTGTTTTTATCTTGGATCCCAATTCTGTTTTGCCAAATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS-3UTR CAA 90 bp CAAGTGACTTACAATGGCCCTAGGAAACAAGTTCTGTTATTATCCCCCATTTTACAGAGAGATCTTTGTTaGATGCTCCAAAAAGACAAA +
Preference number: 5 (lower is better)
Translates to: QVTYNGPRKQVLLLSPILQRDLC*MLQKDK
Trigger: TTTGTCTTTTTGGAGCATCAAACAAAGATCTCTCTG...TAAAATGGGGGATAATAACAGAACTTGTTTCCTAGGGCCATTGTAAGTCACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648081.1
CDS GCA 72 bp AGATTCCTGAGTGCGCGGTCGGCCCCGGCTCCGCCCTaGCCGCTGCCCTCGGCGACGGCCGTGGTCCCTGCC +
Preference number: 6 (lower is better)
Translates to: RFLSARSAPAPP*PLPSATAVVPA
Trigger: GGCAGGGACCACGGCCGTCGCCGAGGGCAGCGGGCAGGGCGGAGCCGGGGCCGACCGCGCACTCAGGAATCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648081.1
ENST00000682357.1
CDS GCA 72 bp GCAGAGGGCTCCGTTCCAGGAGCCGGAGGGGCGGGCTaGCTCCATGGAGAGGGCTCGGGGCAGGTCGCGGGC +
Preference number: 6 (lower is better)
Translates to: AEGSVPGAGGAG*LHGEGSGQVAG
Trigger: GCCCGCGACCTGCCCCGAGCCCTCTCCATGGAGGCAGCCCGCCCCTCCGGCTCCTGGAACGGAGCCCTCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS CCA 72 bp CTCCGTTCCAGGAGCCGGAGGGGCGGGCTGCCTCCATaGAGAGGGCTCGGGGCAGGTCGCGGGCCGAGCGTC +
Preference number: 6 (lower is better)
Translates to: LRSRSRRGGLPP*RGLGAGRGPSV
Trigger: GACGCTCGGCCCGCGACCTGCCCCGAGCCCTCTCCATGGAGGCAGCCCGCCCCTCCGGCTCCTGGAACGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS GCA 72 bp CGGGTGGGAACTCCCTCTCGCCGCCACCCTTTTACCTaGGCAAGGTGTTTCTCACCAGCGGACGCCACCTAT +
Preference number: 6 (lower is better)
Translates to: RVGTPSRRHPFT*ARCFSPADATY
Trigger: ATAGGTGGCGTCCGCTGGTGAGAAACACCTTGCGCAGGTAAAAGGGTGGCGGCGAGAGGGAGTTCCCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS GCA 72 bp GGCACCTGCCCAATGATGGAGTACTTCAGGCGTGTGTaGATCGTGTCAGGCTCATCTTTGTCAGTAGCACAC +
Preference number: 6 (lower is better)
Translates to: GTCPMMEYFRRV*IVSGSSLSVAH
Trigger: GTGTGCTACTGACAAAGATGAGCCTGACACGATGCACACACGCCTGAAGTACTCCATCATTGGGCAGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS CAA 72 bp TACTTCAGGCGTGTGTGCATCGTGTCAGGCTCATCTTaGTCAGTAGCACACACTTGTCCCACAGTAGTGCCC +
Preference number: 6 (lower is better)
Translates to: YFRRVCIVSGSS*SVAHTCPTVVP
Trigger: GGGCACTACTGTGGGACAAGTGTGTGCTACTGACAAAGATGAGCCTGACACGATGCACACACGCCTGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS CAA 72 bp GGTGCCACAAACTCCCTGAGCAGAAGCGCCCACAGTTaGGGTTGTGAAGCCATTCGCAGAATACACTTTGTC +
Preference number: 6 (lower is better)
Translates to: GATNSLSRSAHS*GCEAIRRIHFV
Trigger: GACAAAGTGTATTCTGCGAATGGCTTCACAACCCAAACTGTGGGCGCTTCTGCTCAGGGAGTTTGTGGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS CAA 90 bp ATGATGGAGTACTTCAGGCGTGTGTGCATCGTGTCAGGCTCATCTTaGTCAGTAGCACACACTTGTCCCACAGTAGTGCCCACTCTGCAA +
Preference number: 6 (lower is better)
Translates to: MMEYFRRVCIVSGSS*SVAHTCPTVVPTLQ
Trigger: TTGCAGAGTGGGCACTACTGTGGGACAAGTGTGTGCTACTGACAAAGATGAGCCTGACACGATGCACACACGCCTGAAGTACTCCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS TCA 72 bp AAACTCCCTGAGCAGAAGCGCCCACAGTTTGGGTTGTaGAGCCATTCGCAGAATACACTTTGTCATCTCCAG +
Preference number: 6 (lower is better)
Translates to: KLPEQKRPQFGL*SHSQNTLCHLQ
Trigger: CTGGAGATGACAAAGTGTATTCTGCGAATGGCTTCACAACCCAAACTGTGGGCGCTTCTGCTCAGGGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS CCA 72 bp CCACTTTCCAAGTTGTACTCCTCCACCGCCAATCCTTaGATCTACACGATGTGTGCAGTCATTTTCGGTAAT +
Preference number: 6 (lower is better)
Translates to: PLSKLYSSTANP*IYTMCAVIFGN
Trigger: ATTACCGAAAATGACTGCACACATCGTGTAGATCCAAGGATTGGCGGTGGAGGAGTACAACTTGGAAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS CCA 72 bp AGGGAACATGTAATGTCACATTTTTGCAGGCATCACTaGCAAATATTAAGATTCCTGAGTGCGCGGTCGGCC +
Preference number: 6 (lower is better)
Translates to: REHVMSHFCRHH*QILRFLSARSA
Trigger: GGCCGACCGCGCACTCAGGAATCTTAATATTTGCCAGTGATGCCTGCAAAAATGTGACATTACATGTTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648081.1
ENST00000682357.1
CDS CAA 72 bp CCACTTCTGCATTTTCTTTCATGCGAACAGTCTGTATaGGAGGGTTACACTCAGGGCCCTCATCCTGATCTT +
Preference number: 6 (lower is better)
Translates to: PLLHFLSCEQSV*EGYTQGPHPDL
Trigger: AAGATCAGGATGAGGGCCCTGAGTGTAACCCTCCAATACAGACTGTTCGCATGAAAGAAAATGCAGAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS CAA 90 bp AGTTTCTCGGCATCTAGTTTGGAGGGAACATGTAATGTCACATTTTaGCAGGCATCACTGGCAAATATTAAGATCGCGAGGGTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SFSASSLEGTCNVTF*QASLANIKIARVSR
Trigger: CCTGCTGACCCTCGCGATCTTAATATTTGCCAGTGATGCCTGCAAAAATGTGACATTACATGTTCCCTCCAAACTAGATGCCGAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS CCA 72 bp AGGGAACATGTAATGTCACATTTTTGCAGGCATCACTaGCAAATATTAAGATCGCGAGGGTCAGCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: REHVMSHFCRHH*QILRSRGSAGA
Trigger: TGCTCCTGCTGACCCTCGCGATCTTAATATTTGCCAGTGATGCCTGCAAAAATGTGACATTACATGTTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251081.8
ENST00000280904.11
CDS CAA 72 bp TCAACCGCAACAATCTCCGCAGATGACATGGTGGGTTaGCAGATGATCACTGTCTTTTTAGGTATGAATGGG +
Preference number: 6 (lower is better)
Translates to: STATISADDMVG*QMITVFLGMNG
Trigger: CCCATTCATACCTAAAAAGACAGTGATCATCTGCAAACCCACCATGTCATCTGCGGAGATTGTTGCGGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS CAA 90 bp GATCACTGTCTTTTTAGGTATGAATGGGCTGTTATCATTCACGTCTaGAAGTATAATGCCCAGTGTCCCCGTACATGTTCTCCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: DHCLFRYEWAVIIHV*KYNAQCPRTCSPSL
Trigger: CAAGGAGGGAGAACATGTACGGGGACACTGGGCATTATACTTCAAGACGTGAATGATAACAGCCCATTCATACCTAAAAAGACAGTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS CAA 90 bp TCATCAGGATCAACCGCAACAATCTCCGCAGATGACATGGTGGGTTaGCAGATGATCACTGTCTTTTTAGGTATGAATGGGCTGTTATCA +
Preference number: 6 (lower is better)
Translates to: SSGSTATISADDMVG*QMITVFLGMNGLLS
Trigger: TGATAACAGCCCATTCATACCTAAAAAGACAGTGATCATCTGCAAACCCACCATGTCATCTGCGGAGATTGTTGCGGTTGATCCTGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS CAA 90 bp AGTTTCTCGGCATCTAGTTTGGAGGGAACATGTAATGTCACATTTTaGCAGGCATCACTGGCAAATATTAAGATTCCTGAGTGCGCGGTC +
Preference number: 6 (lower is better)
Translates to: SFSASSLEGTCNVTF*QASLANIKIPECAV
Trigger: GACCGCGCACTCAGGAATCTTAATATTTGCCAGTGATGCCTGCAAAAATGTGACATTACATGTTCCCTCCAAACTAGATGCCGAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648081.1
ENST00000682357.1
CDS CCA 72 bp AATTCCGAGGTTCTTGGTCAACTCCAGGACCTCTTATaGAATAGTATATGGTATAGTTTTGGGCCGTGTCAG +
Preference number: 6 (lower is better)
Translates to: NSEVLGQLQDLL*NSIWYSFGPCQ
Trigger: CTGACACGGCCCAAAACTATACCATATACTATTCCATAAGAGGTCCTGGAGTTGACCAAGAACCTCGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS GCA 72 bp CCTTATGCCACTGCTACTTCTTGTTTCTGGGTCATATaGTTTATATCCATTGCTTGTTGTTCCCACTTCTGC +
Preference number: 6 (lower is better)
Translates to: PYATATSCFWVI*FISIACCSHFC
Trigger: GCAGAAGTGGGAACAACAAGCAATGGATATAAAGCATATGACCCAGAAACAAGAAGTAGCAGTGGCATAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS CAA 72 bp TCTAGCATCGAACAAGGAATTGGAGCCCATCTTCTCTaGGCGCGCCTTAGAACTTTTTCTTTAGTATGTCTT +
Preference number: 6 (lower is better)
Translates to: SSIEQGIGAHLL*ARLRTFSLVCL
Trigger: AAGACATACTAAAGAAAAAGTTCTAAGGCGCGCCAAGAGAAGATGGGCTCCAATTCCTTGTTCGATGCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS TCA 72 bp TTTTTAGGTATGAATGGGCTGTTATCATTCACGTCTTaGAGTATAATGCCCAGTGTCCCCGTACATGTTCTC +
Preference number: 6 (lower is better)
Translates to: FLGMNGLLSFTS*SIMPSVPVHVL
Trigger: GAGAACATGTACGGGGACACTGGGCATTATACTTCAAGACGTGAATGATAACAGCCCATTCATACCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS TCA 72 bp GCCAAGTCTATCTCTCACTGTTATAGGTACTACATATaGGCCAAATGGAGGATCATTCTGATAGGAAAGACG +
Preference number: 6 (lower is better)
Translates to: AKSISHCYRYYI*AKWRIILIGKT
Trigger: CGTCTTTCCTATCAGAATGATCCTCCATTTGGCTCATATGTAGTACCTATAACAGTGAGAGATAGACTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS TCA 72 bp ATTTTCGGTAATGCAGTCACACAGTGTAACATCCAATaGAGTGACACTAGACATGCCAAGTCTATCTCTCAC +
Preference number: 6 (lower is better)
Translates to: IFGNAVTQCNIQ*SDTRHAKSISH
Trigger: GTGAGAGATAGACTTGGCATGTCTAGTGTCACTTCATTGGATGTTACACTGTGTGACTGCATTACCGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS CAA 72 bp TCCAGGACCTCTTATGGAATAGTATATGGTATAGTTTaGGGCCGTGTCAGATTGAACCTGTTGAAGGAAAAG +
Preference number: 6 (lower is better)
Translates to: SRTSYGIVYGIV*GRVRLNLLKEK
Trigger: CTTTTCCTTCAACAGGTTCAATCTGACACGGCCCAAAACTATACCATATACTATTCCATAAGAGGTCCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS CAA 72 bp GCAGTGGAAGTTCTGGAGTATACCCATCTGGAGTTGTaGCAAAGGCAATTATCTCAAAAGATTCATACTGCT +
Preference number: 6 (lower is better)
Translates to: AVEVLEYTHLEL*QRQLSQKIHTA
Trigger: AGCAGTATGAATCTTTTGAGATAATTGCCTTTGCAACAACTCCAGATGGGTATACTCCAGAACTTCCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS CAA 72 bp CTTTTTAGGTATGAATGGGCTGTTATCATTCACGTCTaGAAGTATAATGCCCAGTGTCCCCGTACATGTTCT +
Preference number: 6 (lower is better)
Translates to: LFRYEWAVIIHV*KYNAQCPRTCS
Trigger: AGAACATGTACGGGGACACTGGGCATTATACTTCAAGACGTGAATGATAACAGCCCATTCATACCTAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1
CDS GCA 72 bp GTTGTTGCAAAGGCAATTATCTCAAAAGATTCATACTaGTCACGATCTACAGGACGAGTACAATACAAGTTT +
Preference number: 6 (lower is better)
Translates to: VVAKAIISKDSY*SRSTGRVQYKF
Trigger: AAACTTGTATTGTACTCGTCCTGTAGATCGTGAGCAGTATGAATCTTTTGAGATAATTGCCTTTGCAACAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251081.8
ENST00000280904.11
ENST00000648081.1
ENST00000682357.1