RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DRP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000102385

Ensembl transcript IDs: ENST00000372916.8, ENST00000395209.8, ENST00000402866.5, ENST00000538510.1, ENST00000541709.5

Found 1527 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAAGGTATACTaGGCTCCCACCAGGGCCCCAGGGGATAACAATAGACTCTCCAGG +
Preference number: 1 (lower is better)
Translates to: PREPGQRCFSDVKVY*APTRAPGDNNRLSR
Trigger: CCTGGAGAGTCTATTGTTATCCCCTGGGGCCCTGGTGGGAGCCCAGTATACCTTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR TCA 90 bp GGAAGGCCTTGCTGTTGTTGTCTGGGTGGAAAGTGGCCAGCTTCCTaGTTTGTGGCCTGTGGCTCCTATGGAGGGGCCACTACACACGGT +
Preference number: 1 (lower is better)
Translates to: GRPCCCCLGGKWPAS*FVACGSYGGATTHG
Trigger: ACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGGCCACAAATCAGGAAGCTGGCCACTTTCCACCCAGACAACAACAGCAAGGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 90 bp CAACACTCCCTTGCTCAGCAAGCTGCCACTGTGTCCTCAGGTCTGTaGGGACAGACTCAGAGGAGCAAAGGGTGGCTTCAGCCAGGTTTC +
Preference number: 1 (lower is better)
Translates to: QHSLAQQAATVSSGL*GQTQRSKGWLQPGF
Trigger: GAAACCTGGCTGAAGCCACCCTTTGCTCCTCTGAGTCTGTCCTCACAGACCTGAGGACACAGTGGCAGCTTGCTGAGCAAGGGAGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 90 bp CCCTCTCAAATGTGGCAACTGTGGGAGAAGATGGACTCTGCGAGCTaGGCCCTGGCCTTGAGCCTTTCCTTCTCCCACAGCCATTGGTGT +
Preference number: 1 (lower is better)
Translates to: PSQMWQLWEKMDSAS*ALALSLSFSHSHWC
Trigger: ACACCAATGGCTGTGGGAGAAGGAAAGGCTCAAGGCCAGGGCTCAGCTCGCAGAGTCCATCTTCTCCCACAGTTGCCACATTTGAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 90 bp CTTGCTGTTGTTGTCTGGGTGGAAAGTGGCCAGCTTCCTGATTTGTaGCCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGT +
Preference number: 1 (lower is better)
Translates to: LAVVVWVESGQLPDL*PVAPMEGPLHTVAS
Trigger: ACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGGCCACAAATCAGGAAGCTGGCCACTTTCCACCCAGACAACAACAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 90 bp TGGCCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTaGAAATGCCTTATGATTAGCTGGGGACAATCAGCCACCTCACCT +
Preference number: 1 (lower is better)
Translates to: WPVAPMEGPLHTVAS*KCLMISWGQSATSP
Trigger: AGGTGAGGTGGCTGATTGTCCCCAGCTAATCATAAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 90 bp TGTAGCCAGCAAGCAGCATACCAGACTTCGGTCAGGCCTCAATACTaGCATAGGGGACAGCAAGGGCATTCAGCAGGCCCCCTCTCAAAT +
Preference number: 1 (lower is better)
Translates to: CSQQAAYQTSVRPQY*HRGQQGHSAGPLSN
Trigger: ATTTGAGAGGGGGCCTGCTGAATGCCCTTGCTGTCCCCTATGGCAGTATTGAGGCCTGACCGAAGTCTGGTATGCTGCTTGCTGGCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 90 bp CTCATGAAGCAGGACACCAAGGTGGCGCTGGTCACACTGGCTGCCTaGGTTGGCCACTTGGCTGAAGAGGTACTGAAGTTTTTCCTTCAC +
Preference number: 1 (lower is better)
Translates to: LMKQDTKVALVTLAA*VGHLAEEVLKFFLH
Trigger: GTGAAGGAAAAACTTCAGTACCTCTTCAGCCAAGTGGCCAACTCAGGCAGCCAGTGTGACCAGCGCCACCTTGGTGTCCTGCTTCATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR TCA 90 bp CTGAACCCCTTGATGGGGCACTGCCTACAGATAGAGCACTTGGTCTaGTGCTTCACTTGCTCAGCAATGGTGACCCGATGCAGAACAGCC +
Preference number: 1 (lower is better)
Translates to: LNPLMGHCLQIEHLV*CFTCSAMVTRCRTA
Trigger: GGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAGTGAAGCATCAGACCAAGTGCTCTATCTGTAGGCAGTGCCCCATCAAGGGGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR GCA 90 bp AAGAGGGGCCAACATGTACCGCTTAGCTCTGCAAGGCAGCTTCTCTaGTCCCCATCTGAATGGCCAAGTGATATTTGCCTGGGCTGCAAC +
Preference number: 1 (lower is better)
Translates to: KRGQHVPLSSARQLL*SPSEWPSDICLGCN
Trigger: GTTGCAGCCCAGGCAAATATCACTTGGCCATTCAGATGGGGAGCAGAGAAGCTGCCTTGCAGAGCTAAGCGGTACATGTTGGCCCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 90 bp CCTCTTCCTTACCCAAGGAAAGCAACACTCCCTTGCTCAGCAAGCTaGCACTGTGTCCTCAGGTCTGTGAGGACAGACTCAGAGGAGCAA +
Preference number: 1 (lower is better)
Translates to: PLPYPRKATLPCSAS*HCVLRSVRTDSEEQ
Trigger: TTGCTCCTCTGAGTCTGTCCTCACAGACCTGAGGACACAGTGGCAGCTTGCTGAGCAAGGGAGTGTTGCTTTCCTTGGGTAAGGAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 90 bp TACCACCAGATCCCTGCTGCTGCCCAGAGCCCAAATAATACTAGTTaGGGAATGTGGGGCCAGTGGAAACTGGAAAGGTTGGGTGAAGGC +
Preference number: 1 (lower is better)
Translates to: YHQIPAAAQSPNNTS*GMWGQWKLERLGEG
Trigger: GCCTTCACCCAACCTTTCCAGTTTCCACTGGCCCCACATTCCTCAACTAGTATTATTTGGGCTCTGGGCAGCAGCAGGGATCTGGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 90 bp CACAGCCTGGAAGGGTGTTGGATGGCAGTCATACTACTCCAGACTTaGGGTGGGCTTCCTCTTCCTTACCCAAGGAAAGCAACACTCCCT +
Preference number: 1 (lower is better)
Translates to: HSLEGCWMAVILLQT*GGLPLPYPRKATLP
Trigger: AGGGAGTGTTGCTTTCCTTGGGTAAGGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTATGACTGCCATCCAACACCCTTCCAGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 90 bp CTCCTGCCCAGAGACCTCATGAACACTAAGGCAGATGTTATGCTGTaGAGTCTGACACCCTGGACCTGTGACTTAGTGGTGGAGGAGGCA +
Preference number: 1 (lower is better)
Translates to: LLPRDLMNTKADVML*SLTPWTCDLVVEEA
Trigger: TGCCTCCTCCACCACTAAGTCACAGGTCCAGGGTGTCAGACTTCACAGCATAACATCTGCCTTAGTGTTCATGAGGTCTCTGGGCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 90 bp GTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATaGCTTATGATTAGCTGGGGACAATCAGCCACCTCACCTGATTCA +
Preference number: 1 (lower is better)
Translates to: VAPMEGPLHTVASCK*LMISWGQSATSPDS
Trigger: TGAATCAGGTGAGGTGGCTGATTGTCCCCAGCTAATCATAAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 90 bp CCTGGAAGGGTGTTGGATGGCAGTCATACTACTCCAGACTTGAGGTaGGCTTCCTCTTCCTTACCCAAGGAAAGCAACACTCCCTTGCTC +
Preference number: 1 (lower is better)
Translates to: PGRVLDGSHTTPDLR*ASSSLPKESNTPLL
Trigger: GAGCAAGGGAGTGTTGCTTTCCTTGGGTAAGGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTATGACTGCCATCCAACACCCTTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 90 bp TCCCGCCCACAATCTAGGCTTCTACAAATATGCTCCCACTCTGACTaGTGCCCAGGTTCTATGATTGATGCCCGCCTACCACCTGCTCAA +
Preference number: 1 (lower is better)
Translates to: SRPQSRLLQICSHSD*CPGSMIDARLPPAQ
Trigger: TTGAGCAGGTGGTAGGCGGGCATCAATCATAGAACCTGGGCATCAGTCAGAGTGGGAGCATATTTGTAGAAGCCTAGATTGTGGGCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 90 bp GGAAGCATAGCACAGCCTGATGTCCTCCAGCTAGTCAGCCTTCCGTaGCAATGCCCAATCAATGTGAATCCACTCTGCTGTCACTGGAAG +
Preference number: 1 (lower is better)
Translates to: GSIAQPDVLQLVSLP*QCPINVNPLCCHWK
Trigger: CTTCCAGTGACAGCAGAGTGGATTCACATTGATTGGGCATTGTCACGGAAGGCTGACTAGCTGGAGGACATCAGGCTGTGCTATGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 90 bp AGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTaGGCTCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCC +
Preference number: 1 (lower is better)
Translates to: RALGYKAPLGRKLPK*ALNLFNIPKPTPPP
Trigger: GGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 90 bp ATGCCTCTTTCCTCCTCCAAACGTTCATATAAGGCAGTCAGGCAGTaGATGACCTCTACCACATCCATCACGTGCTCACTGGCCTGCAGA +
Preference number: 1 (lower is better)
Translates to: MPLSSSKRSYKAVRQ*MTSTTSITCSLACR
Trigger: TCTGCAGGCCAGTGAGCACGTGATGGATGTGGTAGAGGTCATTCACTGCCTGACTGCCTTATATGAACGTTTGGAGGAGGAAAGAGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR TCA 90 bp CTCTTTCCTCCTCCAAACGTTCATATAAGGCAGTCAGGCAGTGAATaGCCTCTACCACATCCATCACGTGCTCACTGGCCTGCAGATCAT +
Preference number: 1 (lower is better)
Translates to: LFPPPNVHIRQSGSE*PLPHPSRAHWPADH
Trigger: ATGATCTGCAGGCCAGTGAGCACGTGATGGATGTGGTAGAGGTCATTCACTGCCTGACTGCCTTATATGAACGTTTGGAGGAGGAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR CCA 90 bp GTACCGCTTAGCTCTGCAAGGCAGCTTCTCTGCTCCCCATCTGAATaGCCAAGTGATATTTGCCTGGGCTGCAACAGAAAGGTACTTAAA +
Preference number: 1 (lower is better)
Translates to: VPLSSARQLLCSPSE*PSDICLGCNRKVLK
Trigger: TTTAAGTACCTTTCTGTTGCAGCCCAGGCAAATATCACTTGGCCATTCAGATGGGGAGCAGAGAAGCTGCCTTGCAGAGCTAAGCGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 90 bp AATAACAATTTTAGGCACAGGAAGGCCTTGCTGTTGTTGTCTGGGTaGAAAGTGGCCAGCTTCCTGATTTGTGGCCTGTGGCTCCTATGG +
Preference number: 1 (lower is better)
Translates to: NNNFRHRKALLLLSG*KVASFLICGLWLLW
Trigger: CCATAGGAGCCACAGGCCACAAATCAGGAAGCTGGCCACTTTCCACCCAGACAACAACAGCAAGGCCTTCCTGTGCCTAAAATTGTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 90 bp CACTTCCGTGCCACACAAGCATGCAATGCCAGTCTTAAAAGACAATaGCCGCATCTTTCCGCTGCGACCACTATCAAAAACATTGAGGAG +
Preference number: 1 (lower is better)
Translates to: HFRATQACNASLKRQ*PHLSAATTIKNIEE
Trigger: CTCCTCAATGTTTTTGATAGTGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTTGTGTGGCACGGAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR GCA 90 bp GAAGAGGTACTGAAGTTTTTCCTTCACTTCCGTGCCACACAAGCATaGAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCG +
Preference number: 1 (lower is better)
Translates to: EEVLKFFLHFRATQA*NASLKRQCPHLSAA
Trigger: CGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTTGTGTGGCACGGAAGTGAAGGAAAAACTTCAGTACCTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR GCA 90 bp ACAGTGACTCTTCCTGTTAGATTCTCTGTGACCACAGGTTTCTGTTaGTTTGGTCTTGAGGACAGCCCACCCCAAACATCAATGGAGAGA +
Preference number: 1 (lower is better)
Translates to: TVTLPVRFSVTTGFC*FGLEDSPPQTSMER
Trigger: TCTCTCCATTGATGTTTGGGGTGGGCTGTCCTCAAGACCAAAGCAACAGAAACCTGTGGTCACAGAGAATCTAACAGGAAGAGTCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 90 bp AAAATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTaGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAACCCATTTCCT +
Preference number: 1 (lower is better)
Translates to: KMNLEGKHLLGLASS*PQGFSFLCPANPFP
Trigger: AGGAAATGGGTTGGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 90 bp CTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAACCCATTTCCTaGAGCACCAGAAACTCAAACAGATTTCTCTGTAGGGAAATAGTT +
Preference number: 1 (lower is better)
Translates to: LASGFLISVSCQPIS*STRNSNRFLCREIV
Trigger: AACTATTTCCCTACAGAGAAATCTGTTTGAGTTTCTGGTGCTCCAGGAAATGGGTTGGCAGGACACAGAAATGAGAAACCCTGAGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 90 bp CACTCTGCTGTCACTGGAAGCAGAGGTATCCTCGTAATGGCTTTTTaGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCAGTCCT +
Preference number: 1 (lower is better)
Translates to: HSAVTGSRGILVMAF*PLSNSVKKKSPLSP
Trigger: AGGACTGAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAGGATACCTCTGCTTCCAGTGACAGCAGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 90 bp TTCTTTTCAAAGCAGAATTCAAGGGAAAGGGGGAAAGCACCACAGTaGGTGGCAATCAAAGTTAACCAATTTGTTCCCAACCCTGTCCCT +
Preference number: 1 (lower is better)
Translates to: FFSKQNSRERGKAPQ*VAIKVNQFVPNPVP
Trigger: AGGGACAGGGTTGGGAACAAATTGGTTAACTTTGATTGCCACTCACTGTGGTGCTTTCCCCCTTTCCCTTGAATTCTGCTTTGAAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 90 bp CCACAAAATGTCAGTGACCCCTTAGTGAGAATTCAACTCTTGACCTaGTGCTTCAGTCCACCTACAACGCAAATCCTACATAACAAGATC +
Preference number: 1 (lower is better)
Translates to: PQNVSDPLVRIQLLT*CFSPPTTQILHNKI
Trigger: GATCTTGTTATGTAGGATTTGCGTTGTAGGTGGACTGAAGCAGCAGGTCAAGAGTTGAATTCTCACTAAGGGGTCACTGACATTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 90 bp TTTCAAAGCAGAATTCAAGGGAAAGGGGGAAAGCACCACAGTGAGTaGCAATCAAAGTTAACCAATTTGTTCCCAACCCTGTCCCTTTGT +
Preference number: 1 (lower is better)
Translates to: FQSRIQGKGGKHHSE*QSKLTNLFPTLSLC
Trigger: ACAAAGGGACAGGGTTGGGAACAAATTGGTTAACTTTGATTGCCACTCACTGTGGTGCTTTCCCCCTTTCCCTTGAATTCTGCTTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 90 bp CAAAATGTCAGTGACCCCTTAGTGAGAATTCAACTCTTGACCTGCTaGTTCAGTCCACCTACAACGCAAATCCTACATAACAAGATCTAC +
Preference number: 1 (lower is better)
Translates to: QNVSDPLVRIQLLTC*FSPPTTQILHNKIY
Trigger: GTAGATCTTGTTATGTAGGATTTGCGTTGTAGGTGGACTGAAGCAGCAGGTCAAGAGTTGAATTCTCACTAAGGGGTCACTGACATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 90 bp ATGTTTTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTaGTGCCAGCTCATACCAGCTCACGACAGTTGGCTGTTAAAATTT +
Preference number: 1 (lower is better)
Translates to: MFYSLSWSQVYTVVC*CQLIPAHDSWLLKF
Trigger: AAATTTTAACAGCCAACTGTCGTGAGCTGGTATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR TCA 90 bp AAGTATGGATTTAATGCTTCCAAATATAACGTAGAAGAACCAGAATaGACTGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTA +
Preference number: 1 (lower is better)
Translates to: KYGFNASKYNVEEPE*TVLPLRKVCQGLRL
Trigger: TAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACAGTTCATTCTGGTTCTTCTACGTTATATTTGGAAGCATTAAATCCATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 90 bp AGTCCTAACTGTTCTCTGATACTATTTGACAACAACCCCAGCAAATaGTCACATTCCTTATCATTGATGCTAATCCCACAGTCAGAAGGT +
Preference number: 1 (lower is better)
Translates to: SPNCSLILFDNNPSK*SHSLSLMLIPQSEG
Trigger: ACCTTCTGACTGTGGGATTAGCATCAATGATAAGGAATGTGAGCATTTGCTGGGGTTGTTGTCAAATAGTATCAGAGAACAGTTAGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 90 bp CAAATTCTGTCAAGAAGAAATCACCTCTCAGTCCTAACTGTTCTCTaGTACTATTTGACAACAACCCCAGCAAATGCTCACATTCCTTAT +
Preference number: 1 (lower is better)
Translates to: QILSRRNHLSVLTVL*YYLTTTPANAHIPY
Trigger: ATAAGGAATGTGAGCATTTGCTGGGGTTGTTGTCAAATAGTATCAGAGAACAGTTAGGACTGAGAGGTGATTTCTTCTTGACAGAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 90 bp ATGTCTAACAACATACAACACATTTTGGTAAATCCAACCCCAAGTTaGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAA +
Preference number: 1 (lower is better)
Translates to: MSNNIQHILVNPTPS*IHSTQGSIYLTVGK
Trigger: TTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAACTTGGGGTTGGATTTACCAAAATGTGTTGTATGTTGTTAGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCTGGCCCACTGCAGTTaGCACAGGCCCTCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: LLGLASSWPQGFSFLCPALAHCS*HRPSAA
Trigger: GGCTGCTGAGGGCCTGTGGCAACTGCAGTGGGCCAG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCGACACCCTGGACCTGTaGCTTAGTGGTGGAGGAGGC +
Preference number: 2 (lower is better)
Translates to: LLGLASSWPQGFSFLCPADTLDL*LSGGGG
Trigger: GCCTCCTCCACCACTAAGTCACAGGTCCAGGGTGTC...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CTTCACTTGCTCAGCAATGGTGACCCGATGCAGAACAGCCAGCCACACCATGGATGGCGCTGGTCACACTaGCTGCCTGAGTTGGCCACT +
Preference number: 2 (lower is better)
Translates to: LHLLSNGDPMQNSQPHHGWRWSH*LPELAT
Trigger: AGTGGCCAACTCAGGCAGCCAGTGTGACCAGCGCCA...TCCATGGTGTGGCTGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAGTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTCCTTGCTCAGCAAGCTaGCACTGTGTCCTCAGGTCT +
Preference number: 2 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLPCSAS*HCVLRS
Trigger: AGACCTGAGGACACAGTGGCAGCTTGCTGAGCAAGG...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CCCCTTGATGGGGCACTGCCTACAGATAGAGCACTTGGTCTGATGCTTCACTTGACACCAAGGTGGCGCTaGTCACACTGGCTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: PLDGALPTDRALGLMLHLTPRWR*SHWLPE
Trigger: CTCAGGCAGCCAGTGTGACCAGCGCCACCTTGGTGT...CAAGTGAAGCATCAGACCAAGTGCTCTATCTGTAGGCAGTGCCCCATCAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTCAGAGGAGCAAAGGGTaGCTTCAGCCAGGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLQRSKG*LQPGFQ
Trigger: CTGGAAACCTGGCTGAAGCCACCCTTTGCTCCTCTG...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAGCTGAGGAAAGGCTTTaGCCGGAACCAGGAGAGGAC +
Preference number: 2 (lower is better)
Translates to: DSPPQTSMERDILGEQPGAEERL*PEPGED
Trigger: GTCCTCTCCTGGTTCCGGTCAAAGCCTTTCCTCAGC...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAACCCTTTTGCCTCCCTaGGTTGCGCCAGAGAGTAGG +
Preference number: 2 (lower is better)
Translates to: DSPPQTSMERDILGEQPGTLLPP*VAPESR
Trigger: CCTACTCTCTGGCGCAACTCAGGGAGGCAAAAGGGT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAAAGTGGCCAGCTTCCTaGTTTGTGGCCTGTGGCTCC +
Preference number: 2 (lower is better)
Translates to: DSPPQTSMERDILGEQPGKWPAS*FVACGS
Trigger: GGAGCCACAGGCCACAAATCAGGAAGCTGGCCACTT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp CCCCTTGATGGGGCACTGCCTACAGATAGAGCACTTGGTCTGATGCTTCACTTGTGGGCTCCACATTGCTaGCCCCAAAGGCTGCCACTT +
Preference number: 2 (lower is better)
Translates to: PLDGALPTDRALGLMLHLWAPHC*PQRLPL
Trigger: AAGTGGCAGCCTTTGGGGGCAGCAATGTGGAGCCCA...CAAGTGAAGCATCAGACCAAGTGCTCTATCTGTAGGCAGTGCCCCATCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CCA 90 bp CTGTGGTTAAAGTTACCAGGTCCAAGCGCAGGGCTTTCTGGACTCTGCGGAGTTGATGTCAAGGTATACTaGGCTCCCACCAGGGCCCCA +
Preference number: 2 (lower is better)
Translates to: LWLKLPGPSAGLSGLCGVDVKVY*APTRAP
Trigger: TGGGGCCCTGGTGGGAGCCCAGTATACCTTGACATC...AACTCCGCAGAGTCCAGAAAGCCCTGCGCTTGGACCTGGTAACTTTAACCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGGCCTGTGGCTCCTATaGAGGGGCCACTACACACGG +
Preference number: 2 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWGLWLL*RGHYTR
Trigger: CCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGGCC...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 90 bp GATGGGGCACTGCCTACAGATAGAGCACTTGGTCTGATGCTTCACTaGCTCAGCAATGGTGACCCGATGCAGAACAGCCAGCCACACCAT +
Preference number: 2 (lower is better)
Translates to: DGALPTDRALGLMLH*LSNGDPMQNSQPHH
Trigger: ATGGTGTGGCTGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAGTGAAGCATCAGACCAAGTGCTCTATCTGTAGGCAGTGCCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTGCTGAGGAAAGGCTTTaGCCGGAACCAGGAGAGGAC +
Preference number: 2 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAAEERL*PEPGED
Trigger: GTCCTCTCCTGGTTCCGGTCAAAGCCTTTCCTCAGC...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGCTGAGGAAAGGCTTTaGCCGGAACCAGGAGAGGAC +
Preference number: 2 (lower is better)
Translates to: NESGGKTSPRIGLFLASGAEERL*PEPGED
Trigger: GTCCTCTCCTGGTTCCGGTCAAAGCCTTTCCTCAGC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCCATCACTGCCCGCATaGACCTCACATACCACCAGA +
Preference number: 2 (lower is better)
Translates to: AELGFALFWHLNHLGEPRPSLPA*TSHTTR
Trigger: TCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACCATCACTGCCCGCATaGACCTCACATACCACCAGA +
Preference number: 2 (lower is better)
Translates to: DSPPQTSMERDILGEQPGPSLPA*TSHTTR
Trigger: TCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTCGGGGATACCCTTTTaGCTCCCTGAGTTGCGCCAG +
Preference number: 2 (lower is better)
Translates to: NESGGKTSPRIGLFLASGSGIPF*LPELRQ
Trigger: CTGGCGCAACTCAGGGAGGCAAAAGGGTATCCCCGA...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCCTTGCTCAGCAAGCTaGCACTGTGTCCTCAGGTCT +
Preference number: 2 (lower is better)
Translates to: AELGFALFWHLNHLGEPRPCSAS*HCVLRS
Trigger: AGACCTGAGGACACAGTGGCAGCTTGCTGAGCAAGG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCTGCCCGCCTACCACCTaGTCAACCATCTATCCAGAT +
Preference number: 2 (lower is better)
Translates to: LLGLASSWPQGFSFLCPACPPTT*STIYPD
Trigger: ATCTGGATAGATGGTTGAGCAGGTGGTAGGCGGGCA...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCATTCCCCACACATACTaGAGTGACTGTCCCTGGACC +
Preference number: 2 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAIPHTY*SDCPWT
Trigger: GGTCCAGGGACAGTCACTGCAGTATGTGTGGGGAAT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CTTCACTTGCTCAGCAATGGTGACCCGATGCAGAACAGCCAGCCACACCATGGAACCCACTCCAGGAACTaGGATGCTTCAATGACTGGC +
Preference number: 2 (lower is better)
Translates to: LHLLSNGDPMQNSQPHHGTHSRN*DASMTG
Trigger: GCCAGTCATTGAAGCATCCCAGTTCCTGGAGTGGGT...TCCATGGTGTGGCTGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAGGGGCCAGTGGAAACTaGAAAGGTTGGGTGAAGGCT +
Preference number: 2 (lower is better)
Translates to: DSPPQTSMERDILGEQPGGASGN*KGWVKA
Trigger: AGCCTTCACCCAACCTTTCCAGTTTCCACTGGCCCC...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGGGCCTGTGGCTCCTATaGAGGGGCCACTACACACGG +
Preference number: 2 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKGLWLL*RGHYTR
Trigger: CCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGGCC...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCTTTTCTGCATGGGGTaGGCAGAGCTTGGGTTTGCT +
Preference number: 2 (lower is better)
Translates to: LLGLASSWPQGFSFLCPALFCMG*AELGFA
Trigger: AGCAAACCCAAGCTCTGCCCACCCCATGCAGAAAAG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCTTGTCCTTTTCTGCATaGGGTGGGCAGAGCTTGGGT +
Preference number: 2 (lower is better)
Translates to: LLGLASSWPQGFSFLCPALSFSA*GGQSLG
Trigger: ACCCAAGCTCTGCCCACCCCATGCAGAAAAGGACAA...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTGCAACCCTAAGCTTCTaGACCCAAGCCACTGCCCTG +
Preference number: 2 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAATLSF*TQATAL
Trigger: CAGGGCAGTGGCTTGGGTCCAGAAGCTTAGGGTTGC...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCCACTCTGCTGTCACTaGAAGCAGAGGTATCCTCGT +
Preference number: 2 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAPLCCH*KQRYPR
Trigger: ACGAGGATACCTCTGCTTCCAGTGACAGCAGAGTGG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 90 bp TCACAGCCTGGAAGGGTGTTGGATGGCAGTCATACTACTCCAGACTaGAGGTGGGCTTCCTCTTCCTTACCCAAGGAAAGCAACACTCCC +
Preference number: 2 (lower is better)
Translates to: SQPGRVLDGSHTTPD*RWASSSLPKESNTP
Trigger: GGGAGTGTTGCTTTCCTTGGGTAAGGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTATGACTGCCATCCAACACCCTTCCAGGCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGACCCTTTTGCCTCCCTaGGTTGCGCCAGAGAGTAGG +
Preference number: 2 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWTLLPP*VAPESR
Trigger: CCTACTCTCTGGCGCAACTCAGGGAGGCAAAAGGGT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATCACCTGATTCAGCCTaGGAGCTAGAAGGGTCACAG +
Preference number: 2 (lower is better)
Translates to: DSPPQTSMERDILGEQPGSPDSA*ELEGSQ
Trigger: CTGTGACCCTTCTAGCTCTCAGGCTGAATCAGGTGA...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGATGCCCAGGTTCTATaGTTGATGCCCGCCTACCAC +
Preference number: 2 (lower is better)
Translates to: NESGGKTSPRIGLFLASGDAQVL*LMPAYH
Trigger: GTGGTAGGCGGGCATCAATCATAGAACCTGGGCATC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCTAGTCAGCCTTCCGTaGCAATGCCCAATCAATGTG +
Preference number: 2 (lower is better)
Translates to: LLGLASSWPQGFSFLCPALVSLP*QCPINV
Trigger: CACATTGATTGGGCATTGTCACGGAAGGCTGACTAG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGATACCACCAGATCCCTaGTGCTGCCCAGAGCCCAAA +
Preference number: 2 (lower is better)
Translates to: NESGGKTSPRIGLFLASGIPPDP*CCPEPK
Trigger: TTTGGGCTCTGGGCAGCAGCAGGGATCTGGTGGTAT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCCCTTCTCCCATCACTaGCCGCATGCACCTCACATA +
Preference number: 2 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFPFSHH*PHAPHI
Trigger: TATGTGAGGTGCATGCGGGCAGTGATGGGAGAAGGG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCACATCTTTTCTACCATaGCTGGCCCACTGCAGTTGC +
Preference number: 2 (lower is better)
Translates to: LLGLASSWPQGFSFLCPATSFLP*LAHCSC
Trigger: GCAACTGCAGTGGGCCAGGCATGGTAGAAAAGATGT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCAACTCTTGACCTGCTaGTTCAGTCCACCTACAACG +
Preference number: 2 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAQLLTC*FSPPTT
Trigger: CGTTGTAGGTGGACTGAAGCAGCAGGTCAAGAGTTG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CCCCTTGATGGGGCACTGCCTACAGATAGAGCACTTGGTCTGATGCTTCACTTGCCATCACGTGCTCACTaGCCTGCAGATCATGCTCAT +
Preference number: 2 (lower is better)
Translates to: PLDGALPTDRALGLMLHLPSRAH*PADHAH
Trigger: ATGAGCATGATCTGCAGGCCAGTGAGCACGTGATGG...CAAGTGAAGCATCAGACCAAGTGCTCTATCTGTAGGCAGTGCCCCATCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTGGGGCCAGTGGAAACTaGAAAGGTTGGGTGAAGGCT +
Preference number: 2 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAGASGN*KGWVKA
Trigger: AGCCTTCACCCAACCTTTCCAGTTTCCACTGGCCCC...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCAGAGGAGCAAAGGGTaGCTTCAGCCAGGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAQRSKG*LQPGFQ
Trigger: CTGGAAACCTGGCTGAAGCCACCCTTTGCTCCTCTG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTAGAAGGGTCACAGCCTaGAAGGGTGTTGGATGGCAG +
Preference number: 2 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFRRVTA*KGVGWQ
Trigger: CTGCCATCCAACACCCTTCCAGGCTGTGACCCTTCT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACTGTTGTTGTCTGGGTaGAAAGTGGCCAGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: DSPPQTSMERDILGEQPGLLLSG*KVASFL
Trigger: CAGGAAGCTGGCCACTTTCCACCCAGACAACAACAG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCCACTGGCCCACTGCTaGATTATAATACAACACCCC +
Preference number: 2 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAPLAHC*IIIQHP
Trigger: GGGGTGTTGTATTATAATCCAGCAGTGGGCCAGTGG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTGTAGAAGAACCAGAATaGACTGTTCTCCCCTTAAGG +
Preference number: 2 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLVEEPE*TVLPLR
Trigger: CCTTAAGGGGAGAACAGTTCATTCTGGTTCTTCTAC...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAATACTACTCCAGACTTaGGGTGGGCTTCCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: DSPPQTSMERDILGEQPGILLQT*GGLPLP
Trigger: AGGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTAT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGAAGTGGCCAGCTTCCTaGTTTGTGGCCTGTGGCTCC +
Preference number: 2 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKKWPAS*FVACGS
Trigger: GGAGCCACAGGCCACAAATCAGGAAGCTGGCCACTT...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTGCAGATGTTATGCTGTaGAGTCTGACACCCTGGACC +
Preference number: 2 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAADVML*SLTPWT
Trigger: GGTCCAGGGTGTCAGACTTCACAGCATAACATCTGC...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp CTTCACTTGCTCAGCAATGGTGACCCGATGCAGAACAGCCAGCCACACCATGGATTTCCTTCACTTCCGTaGCACACAAGCATGCAATGC +
Preference number: 2 (lower is better)
Translates to: LHLLSNGDPMQNSQPHHGFPSLP*HTSMQC
Trigger: GCATTGCATGCTTGTGTGGCACGGAAGTGAAGGAAA...TCCATGGTGTGGCTGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR GCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGTCGGGGATACCCTTTTaGCTCCCTGAGTTGCGCCAG +
Preference number: 2 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKSGIPF*LPELRQ
Trigger: CTGGCGCAACTCAGGGAGGCAAAAGGGTATCCCCGA...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACTGGCCCACTGCAGTTaGCACAGGCCCTCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTLAHCS*HRPSAA
Trigger: GGCTGCTGAGGGCCTGTGGCAACTGCAGTGGGCCAG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTCAAGTGATATTTGCCTaGGCTGCAACAGAAAGGTAC +
Preference number: 2 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLQVIFA*AATERY
Trigger: GTACCTTTCTGTTGCAGCCCAGGCAAATATCACTTG...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAAGCCTGGAAGGGTGTTaGATGGCAGTCATACTACTC +
Preference number: 2 (lower is better)
Translates to: DSPPQTSMERDILGEQPGSLEGC*MAVILL
Trigger: GAGTAGTATGACTGCCATCCAACACCCTTCCAGGCT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCGGCCTGTGGCTCCTATaGAGGGGCCACTACACACGG +
Preference number: 2 (lower is better)
Translates to: TSMERDILGEQPGYIYLSGLWLL*RGHYTR
Trigger: CCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGGCC...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTTTTCTGCATGGGGTaGGCAGAGCTTGGGTTTGCT +
Preference number: 2 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFLFCMG*AELGFA
Trigger: AGCAAACCCAAGCTCTGCCCACCCCATGCAGAAAAG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTTTGTCCTTTTCTGCATaGGGTGGGCAGAGCTTGGGT +
Preference number: 2 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYALSFSA*GGQSLG
Trigger: ACCCAAGCTCTGCCCACCCCATGCAGAAAAGGACAA...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 90 bp TCTACCACATCCATCACGTGCTCACTGGCCTGCAGATCATGCTCATaGAAGATTTCCAGGGCTGTGGTTAAAGTTACCAGGTCCAAGCGC +
Preference number: 2 (lower is better)
Translates to: STTSITCSLACRSCS*KISRAVVKVTRSKR
Trigger: GCGCTTGGACCTGGTAACTTTAACCACAGCCCTGGAAATCTTCAATGAGCATGATCTGCAGGCCAGTGAGCACGTGATGGATGTGGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR TCA 90 bp CTGTGGTTAAAGTTACCAGGTCCAAGCGCAGGGCTTTCTGGACTCTGCGGAGTTGGGAACTTTATTGGGTaGAATTGCTCTTTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: LWLKLPGPSAGLSGLCGVGNFIG*NCSFPG
Trigger: CCCTGGGAAAGAGCAATTTCACCCAATAAAGTTCCC...AACTCCGCAGAGTCCAGAAAGCCCTGCGCTTGGACCTGGTAACTTTAACCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR TCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATACTGGGGCTCCAGGTTaGCCCACTCCAGGAACTGGG +
Preference number: 2 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHTGAPG*PTPGTG
Trigger: CCCAGTTCCTGGAGTGGGTCAACCTGGAGCCCCAGT...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAACCAGGAGAGGACTATaGACTATAGGATGGGGATCT +
Preference number: 2 (lower is better)
Translates to: DSPPQTSMERDILGEQPGTRRGL*TIGWGS
Trigger: AGATCCCCATCCTATAGTTCATAGTCCTCTCCTGGT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTACCCTTTTGCCTCCCTaGGTTGCGCCAGAGAGTAGG +
Preference number: 2 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSTLLPP*VAPESR
Trigger: CCTACTCTCTGGCGCAACTCAGGGAGGCAAAAGGGT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGATACTACTCCAGACTTaGGGTGGGCTTCCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: NESGGKTSPRIGLFLASGILLQT*GGLPLP
Trigger: AGGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTAT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTTTATGCTGTGAAGTCTaGCACCCTGGACCTGTGACT +
Preference number: 2 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYALCCEV*HPGPVT
Trigger: AGTCACAGGTCCAGGGTGTCAGACTTCACAGCATAA...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCTAGTCAGCCTTCCGTaGCAATGCCCAATCAATGTG +
Preference number: 2 (lower is better)
Translates to: NESGGKTSPRIGLFLASGLVSLP*QCPINV
Trigger: CACATTGATTGGGCATTGTCACGGAAGGCTGACTAG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp CCGCTGCGACCACTATCAAAAACATTGAGGAGCCAATTGAGGCTCATGTCCACAACCACATCCATCACGTaGTCACTGGCCTGCAGATCA +
Preference number: 2 (lower is better)
Translates to: PLRPLSKTLRSQLRLMSTTTSIT*SLACRS
Trigger: TGATCTGCAGGCCAGTGAGCACGTGATGGATGTGGT...TGTGGACATGAGCCTCAATTGGCTCCTCAATGTTTTTGATAGTGGTCGCAGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR GCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTATACCACCAGATCCCTaGTGCTGCCCAGAGCCCAAA +
Preference number: 2 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFIPPDP*CCPEPK
Trigger: TTTGGGCTCTGGGCAGCAGCAGGGATCTGGTGGTAT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTCGGGGATACCCTTTTaGCTCCCTGAGTTGCGCCAG +
Preference number: 2 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSSGIPF*LPELRQ
Trigger: CTGGCGCAACTCAGGGAGGCAAAAGGGTATCCCCGA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAAAGCAACACTCCCTTaGTCAGCAAGCTGCCACTGT +
Preference number: 2 (lower is better)
Translates to: NESGGKTSPRIGLFLASGKATLP*SASCHC
Trigger: ACAGTGGCAGCTTGCTGAGCAAGGGAGTGTTGCTTT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCTGTTTGTCCTTTTCTaGATGGGGTGGGCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYALFVLF*MGWAEL
Trigger: AAGCTCTGCCCACCCCATGCAGAAAAGGACAAACAG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCTGTTTGTCCTTTTCTaGATGGGGTGGGCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: NESGGKTSPRIGLFLASGLFVLF*MGWAEL
Trigger: AAGCTCTGCCCACCCCATGCAGAAAAGGACAAACAG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCTACCCACTGGCCCACTaGTGGATTATAATACAACAC +
Preference number: 2 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAYPLAH*WIIIQH
Trigger: GTGTTGTATTATAATCCAGCAGTGGGCCAGTGGGTA...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACCCAAGCCACTGCCCTaGCTCCCCTGCAGCAGATCA +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTPKPLP*LPCSRS
Trigger: TGATCTGCTGCAGGGGAGGCAGGGCAGTGGCTTGGG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACCATGCCTGGCCCACTaGAGTTGCCACAGGCCCTCA +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTPCLAH*SCHRPS
Trigger: TGAGGGCCTGTGGCAACTGCAGTGGGCCAGGCATGG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCAAAGCGCAGGGCTTTCTaGACTCTGCGGAGTTTCATG +
Preference number: 2 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPKRRAF*TLRSFM
Trigger: CATGAAACTCCGCAGAGTCCAGAAAGCCCTGCGCTT...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CCA 90 bp CTTCACTTGCTCAGCAATGGTGACCCGATGCAGAACAGCCAGCCACACCATGGAAGATTTCCAGGGCTGTaGTTAAAGTTACCAGGTCCA +
Preference number: 2 (lower is better)
Translates to: LHLLSNGDPMQNSQPHHGRFPGL*LKLPGP
Trigger: TGGACCTGGTAACTTTAACCACAGCCCTGGAAATCT...TCCATGGTGTGGCTGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTGCTCCCCATCTGAATaGCCAAGTGATATTTGCCTG +
Preference number: 2 (lower is better)
Translates to: AELGFALFWHLNHLGEPRCSPSE*PSDICL
Trigger: CAGGCAAATATCACTTGGCCATTCAGATGGGGAGCA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCAACTCGCAACTCAGTaGGTCTCTCAAAATGCTGAG +
Preference number: 2 (lower is better)
Translates to: AELGFALFWHLNHLGEPRQLATQ*VSQNAE
Trigger: CTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGCAGAGGAGCAAAGGGTaGCTTCAGCCAGGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKQRSKG*LQPGFQ
Trigger: CTGGAAACCTGGCTGAAGCCACCCTTTGCTCCTCTG...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGAGAAGGGTCACAGCCTaGAAGGGTGTTGGATGGCAG +
Preference number: 2 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKRRVTA*KGVGWQ
Trigger: CTGCCATCCAACACCCTTCCAGGCTGTGACCCTTCT...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGCAGCTTCCTGATTTGTaGCCTGTGGCTCCTATGGAG +
Preference number: 2 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWQLPDL*PVAPME
Trigger: CTCCATAGGAGCCACAGGCCACAAATCAGGAAGCTG...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGCTGTTGTTGTCTGGGTaGAAAGTGGCCAGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKLLLSG*KVASFL
Trigger: CAGGAAGCTGGCCACTTTCCACCCAGACAACAACAG...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTAGCCTTTCTAATCTaGAGGGAAGGGCACATGTCC +
Preference number: 2 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFLAFLI*REGHMS
Trigger: GGACATGTGCCCTTCCCTCCAGATTAGAAAGGCTAG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp CCGCTGCGACCACTATCAAAAACATTGAGGAGCCAATTGAGGCTCATGTCCACACAGTCAGGCAGTGAATaGCCTCTACCACATCCATCA +
Preference number: 2 (lower is better)
Translates to: PLRPLSKTLRSQLRLMSTQSGSE*PLPHPS
Trigger: TGATGGATGTGGTAGAGGTCATTCACTGCCTGACTG...TGTGGACATGAGCCTCAATTGGCTCCTCAATGTTTTTGATAGTGGTCGCAGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR TCA 90 bp CTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATACCAGCAAGGCAGTCAGGCAGTaGATGACCTCTACCACATCC +
Preference number: 2 (lower is better)
Translates to: LKLVTGIYCGVLMPAHTSKAVRQ*MTSTTS
Trigger: GGATGTGGTAGAGGTCATTCACTGCCTGACTGCCTT...GCTGGTATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAGTAGAAGAACCAGAATaGACTGTTCTCCCCTTAAGG +
Preference number: 2 (lower is better)
Translates to: DSPPQTSMERDILGEQPGVEEPE*TVLPLR
Trigger: CCTTAAGGGGAGAACAGTTCATTCTGGTTCTTCTAC...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGAGAGCTAGTTCAGTTTaGGGATTGGATTCACCTTCC +
Preference number: 2 (lower is better)
Translates to: AELGFALFWHLNHLGEPRRASSV*GLDSPS
Trigger: GGAAGGTGAATCCAATCCTCAAACTGAACTAGCTCT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTCTTTAGCCCTGAGTaGGACCATAAGAGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: NESGGKTSPRIGLFLASGFFSPE*DHKSWK
Trigger: CTTCCAGCTCTTATGGTCTCACTCAGGGCTAAAGAA...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTGCCCAGAGACCTCATaGACACTAAGGCAGATGTTA +
Preference number: 2 (lower is better)
Translates to: NESGGKTSPRIGLFLASGCPETS*TLRQML
Trigger: TAACATCTGCCTTAGTGTTCATGAGGTCTCTGGGCA...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTAATATGCTCCCACTCTaGCTGATGCCCAGGTTCTAT +
Preference number: 2 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFNMLPL*LMPRFY
Trigger: ATAGAACCTGGGCATCAGTCAGAGTGGGAGCATATT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTTGGCCAAGTGATATTTaGCTGGGCTGCAACAGAAAG +
Preference number: 2 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAWPSDI*LGCNRK
Trigger: CTTTCTGTTGCAGCCCAGGCAAATATCACTTGGCCA...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCTCGGGGATACCCTTTTaGCTCCCTGAGTTGCGCCAG +
Preference number: 2 (lower is better)
Translates to: TSMERDILGEQPGYIYLSSGIPF*LPELRQ
Trigger: CTGGCGCAACTCAGGGAGGCAAAAGGGTATCCCCGA...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACACACGGTAGCCAGTTaGAAATGCCTTATGATTAGC +
Preference number: 2 (lower is better)
Translates to: DSPPQTSMERDILGEQPGHTVAS*KCLMIS
Trigger: GCTAATCATAAGGCATTTGCAACTGGCTACCGTGTG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCACACGGTAGCCAGTTaGAAATGCCTTATGATTAGC +
Preference number: 2 (lower is better)
Translates to: AELGFALFWHLNHLGEPRHTVAS*KCLMIS
Trigger: GCTAATCATAAGGCATTTGCAACTGGCTACCGTGTG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTACCACAGGTTTCTGTTaGTTTGGTCTTGAGGACAGC +
Preference number: 2 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFTTGFC*FGLEDS
Trigger: GCTGTCCTCAAGACCAAAGCAACAGAAACCTGTGGT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTGGCAGAGCTTGGGTTTaGTCTATTTTGGCACCTGAA +
Preference number: 2 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFGRAWV*SILAPE
Trigger: TTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGCC...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCCCAAGCCACTGCCCTaGCTCCCCTGCAGCAGATCA +
Preference number: 2 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLPKPLP*LPCSRS
Trigger: TGATCTGCTGCAGGGGAGGCAGGGCAGTGGCTTGGG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTAATGTGAATCCACTCTaGTGTCACTGGAAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFNVNPL*CHWKQR
Trigger: CCTCTGCTTCCAGTGACAGCAGAGTGGATTCACATT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATAGCCACACCATGGACTaGGGCTCCAGGTTGACCCAC +
Preference number: 2 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHSHTMD*GSRLTH
Trigger: GTGGGTCAACCTGGAGCCCCAGTCCATGGTGTGGCT...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTATTCATAATGCTGGATaGAACCTTGGGGTAATTAGG +
Preference number: 2 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLIHNAG*NLGVIR
Trigger: CCTAATTACCCCAAGGTTCCATCCAGCATTATGAAT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCAACTCGCAACTCAGTaGGTCTCTCAAAATGCTGAG +
Preference number: 2 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFQLATQ*VSQNAE
Trigger: CTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTTGGAAGGGTGTTGGATaGCAGTCATACTACTCCAGA +
Preference number: 2 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAWKGVG*QSYYSR
Trigger: TCTGGAGTAGTATGACTGCCATCCAACACCCTTCCA...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGAGCCTGGAAGGGTGTTaGATGGCAGTCATACTACTC +
Preference number: 2 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKSLEGC*MAVILL
Trigger: GAGTAGTATGACTGCCATCCAACACCCTTCCAGGCT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTTGCCTTATGATTAGCTaGGGACAATCAGCCACCTCA +
Preference number: 2 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFCLMIS*GQSATS
Trigger: TGAGGTGGCTGATTGTCCCCAGCTAATCATAAGGCA...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTTGCCTTATGATTAGCTaGGGACAATCAGCCACCTCA +
Preference number: 2 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYACLMIS*GQSATS
Trigger: TGAGGTGGCTGATTGTCCCCAGCTAATCATAAGGCA...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCCTGATTTGTGGCCTGTaGCTCCTATGGAGGGGCCAC +
Preference number: 2 (lower is better)
Translates to: TSMERDILGEQPGYIYLSLICGL*LLWRGH
Trigger: GTGGCCCCTCCATAGGAGCCACAGGCCACAAATCAG...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGCAGCTTCCTGATTTGTaGCCTGTGGCTCCTATGGAG +
Preference number: 2 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKQLPDL*PVAPME
Trigger: CTCCATAGGAGCCACAGGCCACAAATCAGGAAGCTG...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGAATCTGTCCTGGAGCTaGAGTAATAGAACACACACT +
Preference number: 2 (lower is better)
Translates to: AELGFALFWHLNHLGEPRNLSWS*SNRTHT
Trigger: AGTGTGTGTTCTATTACTTCAGCTCCAGGACAGATT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAAAGTGGCCAGCTTCCTaGTTTGTGGCCTGTGGCTCC +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTKWPAS*FVACGS
Trigger: GGAGCCACAGGCCACAAATCAGGAAGCTGGCCACTT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTAGAGCTAGTTCAGTTTaGGGATTGGATTCACCTTCC +
Preference number: 2 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYARASSV*GLDSPS
Trigger: GGAAGGTGAATCCAATCCTCAAACTGAACTAGCTCT...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTAGAGCTAGTTCAGTTTaGGGATTGGATTCACCTTCC +
Preference number: 2 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFRASSV*GLDSPS
Trigger: GGAAGGTGAATCCAATCCTCAAACTGAACTAGCTCT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCTGTTAGATTCTCTGTaGCCACAGGTTTCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: NESGGKTSPRIGLFLASGLLDSL*PQVSVA
Trigger: AGCAACAGAAACCTGTGGTCACAGAGAATCTAACAG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCTGTTAGATTCTCTGTaGCCACAGGTTTCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYALLDSL*PQVSVA
Trigger: AGCAACAGAAACCTGTGGTCACAGAGAATCTAACAG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACCCAGGTTCTATGATTaGTGCCCGCCTACCACCTGC +
Preference number: 2 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPPRFYD*CPPTTC
Trigger: GCAGGTGGTAGGCGGGCATCAATCATAGAACCTGGG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCACTGGCCTGCAGATCATaGTCATTGAAGATTTCCAGG +
Preference number: 2 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPLACRS*SLKISR
Trigger: CCTGGAAATCTTCAATGAGCATGATCTGCAGGCCAG...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR GCA 90 bp CTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATACCAGCACGTGCTCACTGGCCTaGAGATCATGCTCATTGAAG +
Preference number: 2 (lower is better)
Translates to: LKLVTGIYCGVLMPAHTSTCSLA*RSCSLK
Trigger: CTTCAATGAGCATGATCTGCAGGCCAGTGAGCACGT...GCTGGTATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATCCATCACTGCCCGCATaGACCTCACATACCACCAGA +
Preference number: 2 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDPSLPA*TSHTTR
Trigger: TCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGG...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCCCATCACTGCCCGCATaGACCTCACATACCACCAGA +
Preference number: 2 (lower is better)
Translates to: TSMERDILGEQPGYIYLSPSLPA*TSHTTR
Trigger: TCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGG...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCCCCTTCTCCCATCACTaGCCGCATGCACCTCACATA +
Preference number: 2 (lower is better)
Translates to: TSMERDILGEQPGYIYLSPFSHH*PHAPHI
Trigger: TATGTGAGGTGCATGCGGGCAGTGATGGGAGAAGGG...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGCCAAGTGATATTTaGCTGGGCTGCAACAGAAAG +
Preference number: 2 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKWPSDI*LGCNRK
Trigger: CTTTCTGTTGCAGCCCAGGCAAATATCACTTGGCCA...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCCCTTGCTCAGCAAGCTaGCACTGTGTCCTCAGGTCT +
Preference number: 2 (lower is better)
Translates to: TSMERDILGEQPGYIYLSPCSAS*HCVLRS
Trigger: AGACCTGAGGACACAGTGGCAGCTTGCTGAGCAAGG...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGTAGCCAGTTGCAAATaGCTTATGATTAGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: NESGGKTSPRIGLFLASGVASCK*LMISWG
Trigger: TCCCCAGCTAATCATAAGGCATTTGCAACTGGCTAC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCACACGGTAGCCAGTTaGAAATGCCTTATGATTAGC +
Preference number: 2 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAHTVAS*KCLMIS
Trigger: GCTAATCATAAGGCATTTGCAACTGGCTACCGTGTG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTTACCCACTGGCCCACTaGTGGATTATAATACAACAC +
Preference number: 2 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFYPLAH*WIIIQH
Trigger: GTGTTGTATTATAATCCAGCAGTGGGCCAGTGGGTA...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATACCAGCGGATGCTTCAATGACTaGCTTCCCGGTGCTAAAACG +
Preference number: 2 (lower is better)
Translates to: LKLVTGIYCGVLMPAHTSGCFND*LPGAKT
Trigger: CGTTTTAGCACCGGGAAGCCAGTCATTGAAGCATCC...GCTGGTATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGCTCCCCATCTGAATaGCCAAGTGATATTTGCCTG +
Preference number: 2 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKCSPSE*PSDICL
Trigger: CAGGCAAATATCACTTGGCCATTCAGATGGGGAGCA...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCCAGAGGAGCAAAGGGTaGCTTCAGCCAGGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: TSMERDILGEQPGYIYLSQRSKG*LQPGFQ
Trigger: CTGGAAACCTGGCTGAAGCCACCCTTTGCTCCTCTG...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGTGGAAGGGTGTTGGATaGCAGTCATACTACTCCAGA +
Preference number: 2 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWWKGVG*QSYYSR
Trigger: TCTGGAGTAGTATGACTGCCATCCAACACCCTTCCA...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCAGAAGGGTCACAGCCTaGAAGGGTGTTGGATGGCAG +
Preference number: 2 (lower is better)
Translates to: TSMERDILGEQPGYIYLSRRVTA*KGVGWQ
Trigger: CTGCCATCCAACACCCTTCCAGGCTGTGACCCTTCT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTCAGCTTCCTGATTTGTaGCCTGTGGCTCCTATGGAG +
Preference number: 2 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSQLPDL*PVAPME
Trigger: CTCCATAGGAGCCACAGGCCACAAATCAGGAAGCTG...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCTGGATAAAGAGATCATaGTATATGTCGCCTAGGAAG +
Preference number: 2 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAWIKRS*YMSPRK
Trigger: CTTCCTAGGCGACATATACCATGATCTCTTTATCCA...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 90 bp AGAGTTAGAAATAACAATTTTAGGCACAGGAAGGCCTTGCTGTTGTaGTCTGGGTGGAAAGTGGCCAGCTTCCTGATTTGTGGCCTGTGG +
Preference number: 2 (lower is better)
Translates to: RVRNNNFRHRKALLL*SGWKVASFLICGLW
Trigger: CCACAGGCCACAAATCAGGAAGCTGGCCACTTTCCACCCAGACAACAACAGCAAGGCCTTCCTGTGCCTAAAATTGTTATTTCTAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 90 bp TCCAGAGTTAGAAATAACAATTTTAGGCACAGGAAGGCCTTGCTGTaGTTGTCTGGGTGGAAAGTGGCCAGCTTCCTGATTTGTGGCCTG +
Preference number: 2 (lower is better)
Translates to: SRVRNNNFRHRKALL*LSGWKVASFLICGL
Trigger: CAGGCCACAAATCAGGAAGCTGGCCACTTTCCACCCAGACAACAACAGCAAGGCCTTCCTGTGCCTAAAATTGTTATTTCTAACTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 90 bp GAATGTTCTCTGTGTCTTAGCTGGCAAAGGCTAATAAAGGCCTGTTaGTCCTTTTCTGCATGGGGTGGGCAGAGCTTGGGTTTGCTCTAT +
Preference number: 2 (lower is better)
Translates to: ECSLCLSWQRLIKAC*SFSAWGGQSLGLLY
Trigger: ATAGAGCAAACCCAAGCTCTGCCCACCCCATGCAGAAAAGGACAAACAGGCCTTTATTAGCCTTTGCCAGCTAAGACACAGAGAACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCAGGCAGTGCGATAAGCTaGGAACTTAATGTTGTTCAG +
Preference number: 2 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPGSAIS*ELNVVQ
Trigger: CTGAACAACATTAAGTTCTCAGCTTATCGCACTGCC...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR TCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATCTTGCTCAGCAATGGTaGCCCGATGCAGAACAGCCA +
Preference number: 2 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHLAQQW*PDAEQP
Trigger: TGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAG...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAATCTGTCCTGGAGCTaGAGTAATAGAACACACACT +
Preference number: 2 (lower is better)
Translates to: NESGGKTSPRIGLFLASGNLSWS*SNRTHT
Trigger: AGTGTGTGTTCTATTACTTCAGCTCCAGGACAGATT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTAATCTGTCCTGGAGCTaGAGTAATAGAACACACACT +
Preference number: 2 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFNLSWS*SNRTHT
Trigger: AGTGTGTGTTCTATTACTTCAGCTCCAGGACAGATT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGTTGCAAATGCCTTATaGTTAGCTGGGGACAATCAG +
Preference number: 2 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWVANAL*LAGDNQ
Trigger: CTGATTGTCCCCAGCTAATCATAAGGCATTTGCAAC...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAACCGTCACTCCCTCCTaGTTGTGGTGGCAACTGTTG +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTTVTPS*LWWQLL
Trigger: CAACAGTTGCCACCACAATCAGGAGGGAGTGACGGT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTACCACAAAATGTCAGTaGCCCCTTAGTGAGAATTCA +
Preference number: 2 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFTTKCQ*PLSENS
Trigger: TGAATTCTCACTAAGGGGTCACTGACATTTTGTGGT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp CTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATACCAGCAGTCTTAAAAGACAATaGCCGCATCTTTCCGCTGCG +
Preference number: 2 (lower is better)
Translates to: LKLVTGIYCGVLMPAHTSSLKRQ*PHLSAA
Trigger: CGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACT...GCTGGTATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAATACCACCAGATCCCTaGTGCTGCCCAGAGCCCAAA +
Preference number: 2 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPIPPDP*CCPEPK
Trigger: TTTGGGCTCTGGGCAGCAGCAGGGATCTGGTGGTAT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAATACCACCAGATCCCTaGTGCTGCCCAGAGCCCAAA +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTIPPDP*CCPEPK
Trigger: TTTGGGCTCTGGGCAGCAGCAGGGATCTGGTGGTAT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACCCTTCTCCCATCACTaGCCGCATGCACCTCACATA +
Preference number: 2 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPPFSHH*PHAPHI
Trigger: TATGTGAGGTGCATGCGGGCAGTGATGGGAGAAGGG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCCCTTCTCCCATCACTaGCCGCATGCACCTCACATA +
Preference number: 2 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSPFSHH*PHAPHI
Trigger: TATGTGAGGTGCATGCGGGCAGTGATGGGAGAAGGG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGGCAAATGAAGTCAACTaGAGGGCTCTAGGTTATAAA +
Preference number: 2 (lower is better)
Translates to: AELGFALFWHLNHLGEPRANEVN*RALGYK
Trigger: TTTATAACCTAGAGCCCTGCAGTTGACTTCATTTGC...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGGGGCCAGTGGAAACTaGAAAGGTTGGGTGAAGGCT +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTGASGN*KGWVKA
Trigger: AGCCTTCACCCAACCTTTCCAGTTTCCACTGGCCCC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTTGCTCCCCATCTGAATaGCCAAGTGATATTTGCCTG +
Preference number: 2 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFCSPSE*PSDICL
Trigger: CAGGCAAATATCACTTGGCCATTCAGATGGGGAGCA...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGATTCATAATGCTGGATaGAACCTTGGGGTAATTAGG +
Preference number: 2 (lower is better)
Translates to: AELGFALFWHLNHLGEPRIHNAG*NLGVIR
Trigger: CCTAATTACCCCAAGGTTCCATCCAGCATTATGAAT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTAGCCTGGAAGGGTGTTaGATGGCAGTCATACTACTC +
Preference number: 2 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSSLEGC*MAVILL
Trigger: GAGTAGTATGACTGCCATCCAACACCCTTCCAGGCT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAAGAAGGGTCACAGCCTaGAAGGGTGTTGGATGGCAG +
Preference number: 2 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPRRVTA*KGVGWQ
Trigger: CTGCCATCCAACACCCTTCCAGGCTGTGACCCTTCT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAGGCCTGTGGCTCCTATaGAGGGGCCACTACACACGG +
Preference number: 2 (lower is better)
Translates to: QFEDWIHLPELEITILGTGLWLL*RGHYTR
Trigger: CCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGGCC...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCTGATTTGTGGCCTGTaGCTCCTATGGAGGGGCCAC +
Preference number: 2 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLLICGL*LLWRGH
Trigger: GTGGCCCCTCCATAGGAGCCACAGGCCACAAATCAG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTCTTGCTGTTGTTGTCTaGGTGGAAAGTGGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSLAVVV*VESGQL
Trigger: AAGCTGGCCACTTTCCACCCAGACAACAACAGCAAG...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGGTTCAGTTTGAGGATTaGATTCACCTTCCAGAGTTA +
Preference number: 2 (lower is better)
Translates to: AELGFALFWHLNHLGEPRVQFED*IHLPEL
Trigger: TAACTCTGGAAGGTGAATCCAATCCTCAAACTGAAC...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTAGAAAGCTGCCTAAGTaGGCTCTGAATCTATTCAAC +
Preference number: 2 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFRKLPK*ALNLFN
Trigger: GTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 90 bp CCACTCTGCTGTCACTGGAAGCAGAGGTATCCTCGTAATGGCTTTTaGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCAGTCC +
Preference number: 2 (lower is better)
Translates to: PLCCHWKQRYPRNGF*ASIKFCQEEITSQS
Trigger: GGACTGAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAGGATACCTCTGCTTCCAGTGACAGCAGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTACCAGGAGAGGACTATaGACTATAGGATGGGGATCT +
Preference number: 2 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSTRRGL*TIGWGS
Trigger: AGATCCCCATCCTATAGTTCATAGTCCTCTCCTGGT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGGTAGAAGAACCAGAATaGACTGTTCTCCCCTTAAGG +
Preference number: 2 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKVEEPE*TVLPLR
Trigger: CCTTAAGGGGAGAACAGTTCATTCTGGTTCTTCTAC...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTTCACCTGATTCAGCCTaGGAGCTAGAAGGGTCACAG +
Preference number: 2 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSSPDSA*ELEGSQ
Trigger: CTGTGACCCTTCTAGCTCTCAGGCTGAATCAGGTGA...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCACCGTCACTCCCTCCTaGTTGTGGTGGCAACTGTTG +
Preference number: 2 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLTVTPS*LWWQLL
Trigger: CAACAGTTGCCACCACAATCAGGAGGGAGTGACGGT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGCAGATGTTATGCTGTaGAGTCTGACACCCTGGACC +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTADVML*SLTPWT
Trigger: GGTCCAGGGTGTCAGACTTCACAGCATAACATCTGC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCGATGCCCAGGTTCTATaGTTGATGCCCGCCTACCAC +
Preference number: 2 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLDAQVL*LMPAYH
Trigger: GTGGTAGGCGGGCATCAATCATAGAACCTGGGCATC...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGTCCTAACTGTTCTCTaGTACTATTTGACAACAACC +
Preference number: 2 (lower is better)
Translates to: NESGGKTSPRIGLFLASGVLTVL*YYLTTT
Trigger: GGTTGTTGTCAAATAGTATCAGAGAACAGTTAGGAC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCAAAGCAACACTCCCTTaGTCAGCAAGCTGCCACTGT +
Preference number: 2 (lower is better)
Translates to: TSMERDILGEQPGYIYLSKATLP*SASCHC
Trigger: ACAGTGGCAGCTTGCTGAGCAAGGGAGTGTTGCTTT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTGCAAATGAAGTCAACTaGAGGGCTCTAGGTTATAAA +
Preference number: 2 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAANEVN*RALGYK
Trigger: TTTATAACCTAGAGCCCTGCAGTTGACTTCATTTGC...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTAACAACCCCAGCAAATaGTCACATTCCTTATCATTG +
Preference number: 2 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFNNPSK*SHSLSL
Trigger: CAATGATAAGGAATGTGAGCATTTGCTGGGGTTGTT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTGCCTTATGATTAGCTaGGGACAATCAGCCACCTCA +
Preference number: 2 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSCLMIS*GQSATS
Trigger: TGAGGTGGCTGATTGTCCCCAGCTAATCATAAGGCA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACTGTTGTTGTCTGGGTaGAAAGTGGCCAGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTLLLSG*KVASFL
Trigger: CAGGAAGCTGGCCACTTTCCACCCAGACAACAACAG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGGGGTGGGCAGAGCTTaGGTTTGCTCTATTTTGGCA +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTGVGRA*VCSILA
Trigger: TGCCAAAATAGAGCAAACCCAAGCTCTGCCCACCCC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 90 bp TCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAGGAAGGCCTaGCTGTTGTTGTCTGGGTGGAAAGTGGCCAGCTTCCTGATTTGT +
Preference number: 2 (lower is better)
Translates to: SPSRVRNNNFRHRKA*LLLSGWKVASFLIC
Trigger: ACAAATCAGGAAGCTGGCCACTTTCCACCCAGACAACAACAGCAAGGCCTTCCTGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 90 bp ACAGGACCACAAAATGTCAGTGACCCCTTAGTGAGAATTCAACTCTaGACCTGCTGCTTCAGTCCACCTACAACGCAAATCCTACATAAC +
Preference number: 2 (lower is better)
Translates to: TGPQNVSDPLVRIQL*TCCFSPPTTQILHN
Trigger: GTTATGTAGGATTTGCGTTGTAGGTGGACTGAAGCAGCAGGTCAAGAGTTGAATTCTCACTAAGGGGTCACTGACATTTTGTGGTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATACCAGGAGAGGACTATaGACTATAGGATGGGGATCT +
Preference number: 2 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDTRRGL*TIGWGS
Trigger: AGATCCCCATCCTATAGTTCATAGTCCTCTCCTGGT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAGCTGAGGAAAGGCTTTaGCCGGAACCAGGAGAGGAC +
Preference number: 2 (lower is better)
Translates to: QFEDWIHLPELEITILGTAEERL*PEPGED
Trigger: GTCCTCTCCTGGTTCCGGTCAAAGCCTTTCCTCAGC...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAATACTACTCCAGACTTaGGGTGGGCTTCCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTILLQT*GGLPLP
Trigger: AGGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTAT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAATACTACTCCAGACTTaGGGTGGGCTTCCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPILLQT*GGLPLP
Trigger: AGGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTAT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATTGGCCAAGTGATATTTaGCTGGGCTGCAACAGAAAG +
Preference number: 2 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDWPSDI*LGCNRK
Trigger: CTTTCTGTTGCAGCCCAGGCAAATATCACTTGGCCA...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTAAAGCAACACTCCCTTaGTCAGCAAGCTGCCACTGT +
Preference number: 2 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSKATLP*SASCHC
Trigger: ACAGTGGCAGCTTGCTGAGCAAGGGAGTGTTGCTTT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCATTCCCCACACATACTaGAGTGACTGTCCCTGGACC +
Preference number: 2 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLIPHTY*SDCPWT
Trigger: GGTCCAGGGACAGTCACTGCAGTATGTGTGGGGAAT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTAGCCTGGAAGGGTGTTaGATGGCAGTCATACTACTC +
Preference number: 2 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSSLEGC*MAVILL
Trigger: GAGTAGTATGACTGCCATCCAACACCCTTCCAGGCT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCTTGCTGTTGTTGTCTaGGTGGAAAGTGGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSLAVVV*VESGQL
Trigger: AAGCTGGCCACTTTCCACCCAGACAACAACAGCAAG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACTTGCTGTTGTTGTCTaGGTGGAAAGTGGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTLAVVV*VESGQL
Trigger: AAGCTGGCCACTTTCCACCCAGACAACAACAGCAAG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGATAAAGAGATCATaGTATATGTCGCCTAGGAAG +
Preference number: 2 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKWIKRS*YMSPRK
Trigger: CTTCCTAGGCGACATATACCATGATCTCTTTATCCA...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACCAAGAGCTCTCAGGTaGGGTGGGGATAACAGAAAA +
Preference number: 2 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPPRALR*GGDNRK
Trigger: TTTTCTGTTATCCCCACCCCACCTGAGAGCTCTTGG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAACCAGGAGAGGACTATaGACTATAGGATGGGGATCT +
Preference number: 2 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPTRRGL*TIGWGS
Trigger: AGATCCCCATCCTATAGTTCATAGTCCTCTCCTGGT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCTTAGAATTTAATGTGTaGGTGAGGCCAGGAGAGCAC +
Preference number: 2 (lower is better)
Translates to: TSMERDILGEQPGYIYLSLEFNV*VRPGEH
Trigger: GTGCTCTCCTGGCCTCACTCACACATTAAATTCTAA...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATTCTTTAGCCCTGAGTaGGACCATAAGAGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTFFSPE*DHKSWK
Trigger: CTTCCAGCTCTTATGGTCTCACTCAGGGCTAAAGAA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCTTATGCTGTGAAGTCTaGCACCCTGGACCTGTGACT +
Preference number: 2 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLLCCEV*HPGPVT
Trigger: AGTCACAGGTCCAGGGTGTCAGACTTCACAGCATAA...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCATGCCCAGAGACCTCATaGACACTAAGGCAGATGTTA +
Preference number: 2 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPCPETS*TLRQML
Trigger: TAACATCTGCCTTAGTGTTCATGAGGTCTCTGGGCA...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATGGCCAAGTGATATTTaGCTGGGCTGCAACAGAAAG +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTWPSDI*LGCNRK
Trigger: CTTTCTGTTGCAGCCCAGGCAAATATCACTTGGCCA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTACCACAGGTTTCTGTTaGTTTGGTCTTGAGGACAGC +
Preference number: 2 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSTTGFC*FGLEDS
Trigger: GCTGTCCTCAAGACCAAAGCAACAGAAACCTGTGGT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGGCAGAGCTTGGGTTTaGTCTATTTTGGCACCTGAA +
Preference number: 2 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSGRAWV*SILAPE
Trigger: TTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGCC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAGGGGCCAGTGGAAACTaGAAAGGTTGGGTGAAGGCT +
Preference number: 2 (lower is better)
Translates to: QFEDWIHLPELEITILGTGASGN*KGWVKA
Trigger: AGCCTTCACCCAACCTTTCCAGTTTCCACTGGCCCC...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAACTCGCAACTCAGTaGGTCTCTCAAAATGCTGAG +
Preference number: 2 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPQLATQ*VSQNAE
Trigger: CTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGTAGAAGAACCAGAATaGACTGTTCTCCCCTTAAGG +
Preference number: 2 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSVEEPE*TVLPLR
Trigger: CCTTAAGGGGAGAACAGTTCATTCTGGTTCTTCTAC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACATCACCTGATTCAGCCTaGGAGCTAGAAGGGTCACAG +
Preference number: 2 (lower is better)
Translates to: QFEDWIHLPELEITILGTSPDSA*ELEGSQ
Trigger: CTGTGACCCTTCTAGCTCTCAGGCTGAATCAGGTGA...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAAGAGCTAGTTCAGTTTaGGGATTGGATTCACCTTCC +
Preference number: 2 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPRASSV*GLDSPS
Trigger: GGAAGGTGAATCCAATCCTCAAACTGAACTAGCTCT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCATAAACTTAGGCAAATaGAGTCAACTGCAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: TSMERDILGEQPGYIYLSINLGK*SQLQGS
Trigger: AGAGCCCTGCAGTTGACTTCATTTGCCTAAGTTTAT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCATTAGAATTTAATGTGTaGGTGAGGCCAGGAGAGCAC +
Preference number: 2 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPLEFNV*VRPGEH
Trigger: GTGCTCTCCTGGCCTCACTCACACATTAAATTCTAA...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATTAGAATTTAATGTGTaGGTGAGGCCAGGAGAGCAC +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTLEFNV*VRPGEH
Trigger: GTGCTCTCCTGGCCTCACTCACACATTAAATTCTAA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAGTAGCCAGTTGCAAATaGCTTATGATTAGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPVASCK*LMISWG
Trigger: TCCCCAGCTAATCATAAGGCATTTGCAACTGGCTAC...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCAAGTGATATTTGCCTaGGCTGCAACAGAAAGGTAC +
Preference number: 2 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSQVIFA*AATERY
Trigger: GTACCTTTCTGTTGCAGCCCAGGCAAATATCACTTG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCTGTTAGATTCTCTGTaGCCACAGGTTTCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLLLDSL*PQVSVA
Trigger: AGCAACAGAAACCTGTGGTCACAGAGAATCTAACAG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCGTAGCCAGTTGCAAATaGCTTATGATTAGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLVASCK*LMISWG
Trigger: TCCCCAGCTAATCATAAGGCATTTGCAACTGGCTAC...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCACACGGTAGCCAGTTaGAAATGCCTTATGATTAGC +
Preference number: 2 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLHTVAS*KCLMIS
Trigger: GCTAATCATAAGGCATTTGCAACTGGCTACCGTGTG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCGCAAATGAAGTCAACTaGAGGGCTCTAGGTTATAAA +
Preference number: 2 (lower is better)
Translates to: TSMERDILGEQPGYIYLSANEVN*RALGYK
Trigger: TTTATAACCTAGAGCCCTGCAGTTGACTTCATTTGC...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCAAGTGATATTTGCCTaGGCTGCAACAGAAAGGTAC +
Preference number: 2 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLQVIFA*AATERY
Trigger: GTACCTTTCTGTTGCAGCCCAGGCAAATATCACTTG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATATTCATAATGCTGGATaGAACCTTGGGGTAATTAGG +
Preference number: 2 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDIHNAG*NLGVIR
Trigger: CCTAATTACCCCAAGGTTCCATCCAGCATTATGAAT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAATTCATAATGCTGGATaGAACCTTGGGGTAATTAGG +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTIHNAG*NLGVIR
Trigger: CCTAATTACCCCAAGGTTCCATCCAGCATTATGAAT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGTTCAGTTTGAGGATTaGATTCACCTTCCAGAGTTA +
Preference number: 2 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTVQFED*IHLPEL
Trigger: TAACTCTGGAAGGTGAATCCAATCCTCAAACTGAAC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCATGGATAAAGAGATCATaGTATATGTCGCCTAGGAAG +
Preference number: 2 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPWIKRS*YMSPRK
Trigger: CTTCCTAGGCGACATATACCATGATCTCTTTATCCA...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAGTTGCAAATGCCTTATaGTTAGCTGGGGACAATCAG +
Preference number: 2 (lower is better)
Translates to: QFEDWIHLPELEITILGTVANAL*LAGDNQ
Trigger: CTGATTGTCCCCAGCTAATCATAAGGCATTTGCAAC...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCGTCCTAACTGTTCTCTaGTACTATTTGACAACAACC +
Preference number: 2 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLVLTVL*YYLTTT
Trigger: GGTTGTTGTCAAATAGTATCAGAGAACAGTTAGGAC...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAGTAGCCAGTTGCAAATaGCTTATGATTAGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: QFEDWIHLPELEITILGTVASCK*LMISWG
Trigger: TCCCCAGCTAATCATAAGGCATTTGCAACTGGCTAC...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCGCAAATGAAGTCAACTaGAGGGCTCTAGGTTATAAA +
Preference number: 2 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLANEVN*RALGYK
Trigger: TTTATAACCTAGAGCCCTGCAGTTGACTTCATTTGC...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAAATCTGTCCTGGAGCTaGAGTAATAGAACACACACT +
Preference number: 2 (lower is better)
Translates to: QFEDWIHLPELEITILGTNLSWS*SNRTHT
Trigger: AGTGTGTGTTCTATTACTTCAGCTCCAGGACAGATT...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 90 bp AGAAGACTAATACACAACAAGATGTCTAACAACATACAACACATTTaGGTAAATCCAACCCCAAGTTGGATTCATAGTACCCAAGGATCC +
Preference number: 2 (lower is better)
Translates to: RRLIHNKMSNNIQHI*VNPTPSWIHSTQGS
Trigger: GGATCCTTGGGTACTATGAATCCAACTTGGGGTTGGATTTACCAAAATGTGTTGTATGTTGTTAGACATCTTGTTGTGTATTAGTCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 72 bp AGGCTGCCACTTCACCCAGCTGACGGGGCACCTGAATaGCCTCATGAAGCAGGACACCAAGGTGGCGCTGGT +
Preference number: 3 (lower is better)
Translates to: RLPLHPADGAPE*PHEAGHQGGAG
Trigger: ACCAGCGCCACCTTGGTGTCCTGCTTCATGAGGCCATTCAGGTGCCCCGTCAGCTGGGTGAAGTGGCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR GCA 72 bp AACGGAAGCAACTACGGACACTGGGCTCCACATTGCTaGCCCCAAAGGCTGCCACTTCACCCAGCTGACGGG +
Preference number: 3 (lower is better)
Translates to: NGSNYGHWAPHC*PQRLPLHPADG
Trigger: CCCGTCAGCTGGGTGAAGTGGCAGCCTTTGGGGGCAGCAATGTGGAGCCCAGTGTCCGTAGTTGCTTCCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CAA 90 bp CTTCACTTGCTCAGCAATGGTGACCCGATGCAGAACAGCCAGCCACACCATGGAACACTGGGCTCCACATaGCTGCCCCCAAAGGCTGCC +
Preference number: 3 (lower is better)
Translates to: LHLLSNGDPMQNSQPHHGTLGST*LPPKAA
Trigger: GGCAGCCTTTGGGGGCAGCAATGTGGAGCCCAGTGT...TCCATGGTGTGGCTGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAGTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR GCA 72 bp CAAGCAGCATACCAGACTTCGGTCAGGCCTCAATACTaGCATAGGGGACAGCAAGGGCATTCAGCAGGCCCC +
Preference number: 3 (lower is better)
Translates to: QAAYQTSVRPQY*HRGQQGHSAGP
Trigger: GGGGCCTGCTGAATGCCCTTGCTGTCCCCTATGGCAGTATTGAGGCCTGACCGAAGTCTGGTATGCTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 72 bp GTTGTCTGGGTGGAAAGTGGCCAGCTTCCTGATTTGTaGCCTGTGGCTCCTATGGAGGGGCCACTACACACG +
Preference number: 3 (lower is better)
Translates to: VVWVESGQLPDL*PVAPMEGPLHT
Trigger: CGTGTGTAGTGGCCCCTCCATAGGAGCCACAGGCCACAAATCAGGAAGCTGGCCACTTTCCACCCAGACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 72 bp GGGCACATGTCCTCCCTAGGGAAGCATAGCACAGCCTaGTGTCCTCCAGCTAGTCAGCCTTCCGTGACAATG +
Preference number: 3 (lower is better)
Translates to: GHMSSLGKHSTA*CPPASQPSVTM
Trigger: CATTGTCACGGAAGGCTGACTAGCTGGAGGACATCAGGCTGTGCTATGCTTCCCTAGGGAGGACATGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 72 bp CTGGGGCTCCAGGTTGACCCACTCCAGGAACTGGGATaGTTCAATGACTGGCTTCCCGGTGCTAAAACGGAA +
Preference number: 3 (lower is better)
Translates to: LGLQVDPLQELG*FNDWLPGAKTE
Trigger: TTCCGTTTTAGCACCGGGAAGCCAGTCATTGAAGCATCCCAGTTCCTGGAGTGGGTCAACCTGGAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR GCA 72 bp TCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTTaGCACAGGCCCTCAGCAGCCCAAGAGCTCTCAGGT +
Preference number: 3 (lower is better)
Translates to: STSFLPCLAHCS*HRPSAAQELSG
Trigger: ACCTGAGAGCTCTTGGGCTGCTGAGGGCCTGTGGCAACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 72 bp CCTGGACAGAGGTGCTTCTCGGATGTCAAGGTATACTaGGCTCCCACCAGGGCCCCAGGGGATAACAATAGA +
Preference number: 3 (lower is better)
Translates to: PGQRCFSDVKVY*APTRAPGDNNR
Trigger: TCTATTGTTATCCCCTGGGGCCCTGGTGGGAGCCCAGTATACCTTGACATCCGAGAAGCACCTCTGTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CAA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCTTTTGCCTCCCTGAGTaGCGCCAGAGAGTAGGGGTA +
Preference number: 3 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAFCLPE*RQRVGV
Trigger: TACCCCTACTCTCTGGCGCAACTCAGGGAGGCAAAA...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTCATACTACTCCAGACTaGAGGTGGGCTTCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLHTTPD*RWASSS
Trigger: GGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTATG...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 72 bp TGGGGCCAGTGGAAACTGGAAAGGTTGGGTGAAGGCTaGGGAAAGGCTTTGACCGGAACCAGGAGAGGACTA +
Preference number: 3 (lower is better)
Translates to: WGQWKLERLGEG*GKALTGTRRGL
Trigger: TAGTCCTCTCCTGGTTCCGGTCAAAGCCTTTCCTCAGCCTTCACCCAACCTTTCCAGTTTCCACTGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 72 bp AGGAATGTGGGGCCAGTGGAAACTGGAAAGGTTGGGTaGAGGCTGAGGAAAGGCTTTGACCGGAACCAGGAG +
Preference number: 3 (lower is better)
Translates to: RNVGPVETGKVG*RLRKGFDRNQE
Trigger: CTCCTGGTTCCGGTCAAAGCCTTTCCTCAGCCTTCACCCAACCTTTCCAGTTTCCACTGGCCCCACATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGGCCAGCTTCCTGATTaGTGGCCTGTGGCTCCTATG +
Preference number: 3 (lower is better)
Translates to: NESGGKTSPRIGLFLASGGQLPD*WPVAPM
Trigger: CATAGGAGCCACAGGCCACAAATCAGGAAGCTGGCC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAGGAAGGCCTTGCTGTaGTTGTCTGGGTGGAAAGTG +
Preference number: 3 (lower is better)
Translates to: LLGLASSWPQGFSFLCPARKALL*LSGWKV
Trigger: CACTTTCCACCCAGACAACAACAGCAAGGCCTTCCT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 72 bp CTTCCTCTTCCTTACCCAAGGAAAGCAACACTCCCTTaGTCAGCAAGCTGCCACTGTGTCCTCAGGTCTGTG +
Preference number: 3 (lower is better)
Translates to: LPLPYPRKATLP*SASCHCVLRSV
Trigger: CACAGACCTGAGGACACAGTGGCAGCTTGCTGAGCAAGGGAGTGTTGCTTTCCTTGGGTAAGGAAGAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 72 bp GCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTaGAAATGCCTTATGATTAGCTGGGGACAATCAGCC +
Preference number: 3 (lower is better)
Translates to: APMEGPLHTVAS*KCLMISWGQSA
Trigger: GGCTGATTGTCCCCAGCTAATCATAAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 72 bp GTTGACCCACTCCAGGAACTGGGATGCTTCAATGACTaGCTTCCCGGTGCTAAAACGGAAGCAACTACGGAC +
Preference number: 3 (lower is better)
Translates to: VDPLQELGCFND*LPGAKTEATTD
Trigger: GTCCGTAGTTGCTTCCGTTTTAGCACCGGGAAGCCAGTCATTGAAGCATCCCAGTTCCTGGAGTGGGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CAA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTTTTTGCCTCCCTGAGTaGCGCCAGAGAGTAGGGGTA +
Preference number: 3 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAFCLPE*RQRVGV
Trigger: TACCCCTACTCTCTGGCGCAACTCAGGGAGGCAAAA...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGAAAGCAACACTCCCTaGCTCAGCAAGCTGCCACTG +
Preference number: 3 (lower is better)
Translates to: NESGGKTSPRIGLFLASGESNTP*LSKLPL
Trigger: CAGTGGCAGCTTGCTGAGCAAGGGAGTGTTGCTTTC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTGAAAGCAACACTCCCTaGCTCAGCAAGCTGCCACTG +
Preference number: 3 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAESNTP*LSKLPL
Trigger: CAGTGGCAGCTTGCTGAGCAAGGGAGTGTTGCTTTC...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTCTGTTGCTTTGGTCTaGAGGACAGCCCACCCCAAA +
Preference number: 3 (lower is better)
Translates to: AELGFALFWHLNHLGEPRSVALV*RTAHPK
Trigger: TTTGGGGTGGGCTGTCCTCAAGACCAAAGCAACAGA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTTGGGGTGGGCAGAGCTaGGGTTTGCTCTATTTTGGC +
Preference number: 3 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFWGGQS*GLLYFG
Trigger: GCCAAAATAGAGCAAACCCAAGCTCTGCCCACCCCA...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTTGGGGTGGGCAGAGCTaGGGTTTGCTCTATTTTGGC +
Preference number: 3 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAWGGQS*GLLYFG
Trigger: GCCAAAATAGAGCAAACCCAAGCTCTGCCCACCCCA...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 72 bp TTGATGGGGCACTGCCTACAGATAGAGCACTTGGTCTaGTGCTTCACTTGCTCAGCAATGGTGACCCGATGC +
Preference number: 3 (lower is better)
Translates to: LMGHCLQIEHLV*CFTCSAMVTRC
Trigger: GCATCGGGTCACCATTGCTGAGCAAGTGAAGCATCAGACCAAGTGCTCTATCTGTAGGCAGTGCCCCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR TCA 72 bp AAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTaGATCTATTCAACATTCCCAAGCCCACTCCCCCAC +
Preference number: 3 (lower is better)
Translates to: KLLLGESCLSGL*IYSTFPSPLPH
Trigger: GTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 72 bp GCACAGCCTGATGTCCTCCAGCTAGTCAGCCTTCCGTaGCAATGCCCAATCAATGTGAATCCACTCTGCTGT +
Preference number: 3 (lower is better)
Translates to: AQPDVLQLVSLP*QCPINVNPLCC
Trigger: ACAGCAGAGTGGATTCACATTGATTGGGCATTGTCACGGAAGGCTGACTAGCTGGAGGACATCAGGCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 72 bp ATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATaGCTTATGATTAGCTGGGGACAATCAGCCACCTCA +
Preference number: 3 (lower is better)
Translates to: MEGPLHTVASCK*LMISWGQSATS
Trigger: TGAGGTGGCTGATTGTCCCCAGCTAATCATAAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 72 bp AGCTCTGCAAGGCAGCTTCTCTGCTCCCCATCTGAATaGCCAAGTGATATTTGCCTGGGCTGCAACAGAAAG +
Preference number: 3 (lower is better)
Translates to: SSARQLLCSPSE*PSDICLGCNRK
Trigger: CTTTCTGTTGCAGCCCAGGCAAATATCACTTGGCCATTCAGATGGGGAGCAGAGAAGCTGCCTTGCAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 72 bp CTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTaGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAAC +
Preference number: 3 (lower is better)
Translates to: LEGKHLLGLASS*PQGFSFLCPAN
Trigger: GTTGGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCATACTACTCCAGACTaGAGGTGGGCTTCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAHTTPD*RWASSS
Trigger: GGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTATG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTAGGAAGGCCTTGCTGTaGTTGTCTGGGTGGAAAGTG +
Preference number: 3 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYARKALL*LSGWKV
Trigger: CACTTTCCACCCAGACAACAACAGCAAGGCCTTCCT...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCAGGTTTCTGTTGCTTaGGTCTTGAGGACAGCCCAC +
Preference number: 3 (lower is better)
Translates to: NESGGKTSPRIGLFLASGQVSVA*VLRTAH
Trigger: GTGGGCTGTCCTCAAGACCAAAGCAACAGAAACCTG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCCTGGCCCACTGCAGTaGCCACAGGCCCTCAGCAGC +
Preference number: 3 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLPGPLQ*PQALSS
Trigger: GCTGCTGAGGGCCTGTGGCAACTGCAGTGGGCCAGG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp CCCCTTGATGGGGCACTGCCTACAGATAGAGCACTTGGTCTGATGCTTCACTTGTGCAGATCATGCTCATaGAAGATTTCCAGGGCTGTG +
Preference number: 3 (lower is better)
Translates to: PLDGALPTDRALGLMLHLCRSCS*KISRAV
Trigger: CACAGCCCTGGAAATCTTCAATGAGCATGATCTGCA...CAAGTGAAGCATCAGACCAAGTGCTCTATCTGTAGGCAGTGCCCCATCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CAA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTTTTTGCCTCCCTGAGTaGCGCCAGAGAGTAGGGGTA +
Preference number: 3 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFFCLPE*RQRVGV
Trigger: TACCCCTACTCTCTGGCGCAACTCAGGGAGGCAAAA...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
51% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGCATACTACTCCAGACTaGAGGTGGGCTTCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWHTTPD*RWASSS
Trigger: GGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTATG...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGCAGCCTGGAAGGGTGTaGGATGGCAGTCATACTACT +
Preference number: 3 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKQPGRV*DGSHTT
Trigger: AGTAGTATGACTGCCATCCAACACCCTTCCAGGCTG...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTGGCCAGCTTCCTGATTaGTGGCCTGTGGCTCCTATG +
Preference number: 3 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSGQLPD*WPVAPM
Trigger: CATAGGAGCCACAGGCCACAAATCAGGAAGCTGGCC...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGAGGAAGGCCTTGCTGTaGTTGTCTGGGTGGAAAGTG +
Preference number: 3 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWRKALL*LSGWKV
Trigger: CACTTTCCACCCAGACAACAACAGCAAGGCCTTCCT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCGTTATAAAGCTCCTCTaGGGAGAAAGCTGCCTAAGT +
Preference number: 3 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAVIKLL*GESCLS
Trigger: ACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAAC...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCTAATAAAGGCCTGTTaGTCCTTTTCTGCATGGGGT +
Preference number: 3 (lower is better)
Translates to: LLGLASSWPQGFSFLCPALIKAC*SFSAWG
Trigger: ACCCCATGCAGAAAAGGACAAACAGGCCTTTATTAG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 72 bp GAAGGGTGTTGGATGGCAGTCATACTACTCCAGACTTaGGGTGGGCTTCCTCTTCCTTACCCAAGGAAAGCA +
Preference number: 3 (lower is better)
Translates to: EGCWMAVILLQT*GGLPLPYPRKA
Trigger: TGCTTTCCTTGGGTAAGGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTATGACTGCCATCCAACACCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 72 bp AGATGTTATGCTGTGAAGTCTGACACCCTGGACCTGTaGCTTAGTGGTGGAGGAGGCAACCCTAAGCTTCTG +
Preference number: 3 (lower is better)
Translates to: RCYAVKSDTLDL*LSGGGGNPKLL
Trigger: CAGAAGCTTAGGGTTGCCTCCTCCACCACTAAGTCACAGGTCCAGGGTGTCAGACTTCACAGCATAACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 72 bp ATGACCTCTACCACATCCATCACGTGCTCACTGGCCTaGAGATCATGCTCATTGAAGATTTCCAGGGCTGTG +
Preference number: 3 (lower is better)
Translates to: MTSTTSITCSLA*RSCSLKISRAV
Trigger: CACAGCCCTGGAAATCTTCAATGAGCATGATCTGCAGGCCAGTGAGCACGTGATGGATGTGGTAGAGGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR GCA 72 bp CAACATGTACCGCTTAGCTCTGCAAGGCAGCTTCTCTaGTCCCCATCTGAATGGCCAAGTGATATTTGCCTG +
Preference number: 3 (lower is better)
Translates to: QHVPLSSARQLL*SPSEWPSDICL
Trigger: CAGGCAAATATCACTTGGCCATTCAGATGGGGAGCAGAGAAGCTGCCTTGCAGAGCTAAGCGGTACATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp CCCCTTGATGGGGCACTGCCTACAGATAGAGCACTTGGTCTGATGCTTCACTTGCTTTATTGGGTGAAATaGCTCTTTCCCAGGGAACCT +
Preference number: 3 (lower is better)
Translates to: PLDGALPTDRALGLMLHLLYWVK*LFPREP
Trigger: AGGTTCCCTGGGAAAGAGCAATTTCACCCAATAAAG...CAAGTGAAGCATCAGACCAAGTGCTCTATCTGTAGGCAGTGCCCCATCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CAA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATCACTGGCTGCCTGAGTaGGCCACTTGGCTGAAGAGG +
Preference number: 3 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHHWLPE*ATWLKR
Trigger: CCTCTTCAGCCAAGTGGCCAACTCAGGCAGCCAGTG...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CAA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCGGCCAGCTTCCTGATTaGTGGCCTGTGGCTCCTATG +
Preference number: 3 (lower is better)
Translates to: TSMERDILGEQPGYIYLSGQLPD*WPVAPM
Trigger: CATAGGAGCCACAGGCCACAAATCAGGAAGCTGGCC...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTAAGGCCTTGCTGTTGTaGTCTGGGTGGAAAGTGGCC +
Preference number: 3 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSKALLL*SGWKVA
Trigger: GGCCACTTTCCACCCAGACAACAACAGCAAGGCCTT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGGTTATAAAGCTCCTCTaGGGAGAAAGCTGCCTAAGT +
Preference number: 3 (lower is better)
Translates to: AELGFALFWHLNHLGEPRVIKLL*GESCLS
Trigger: ACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAAC...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTGTGAGAATTCAACTCTaGACCTGCTGCTTCAGTCCA +
Preference number: 3 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFVRIQL*TCCFSP
Trigger: TGGACTGAAGCAGCAGGTCAAGAGTTGAATTCTCAC...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGTGAGAATTCAACTCTaGACCTGCTGCTTCAGTCCA +
Preference number: 3 (lower is better)
Translates to: NESGGKTSPRIGLFLASGVRIQL*TCCFSP
Trigger: TGGACTGAAGCAGCAGGTCAAGAGTTGAATTCTCAC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 72 bp TCCTCCTCCAAACGTTCATATAAGGCAGTCAGGCAGTaGATGACCTCTACCACATCCATCACGTGCTCACTG +
Preference number: 3 (lower is better)
Translates to: SSSKRSYKAVRQ*MTSTTSITCSL
Trigger: CAGTGAGCACGTGATGGATGTGGTAGAGGTCATTCACTGCCTGACTGCCTTATATGAACGTTTGGAGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CAA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAGGGCTGATCTCGAACTaGAAGATTAAAGGGAACATT +
Preference number: 3 (lower is better)
Translates to: DSPPQTSMERDILGEQPGGLISN*KIKGNI
Trigger: AATGTTCCCTTTAATCTTCAAGTTCGAGATCAGCCC...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCGAAAGCAACACTCCCTaGCTCAGCAAGCTGCCACTG +
Preference number: 3 (lower is better)
Translates to: TSMERDILGEQPGYIYLSESNTP*LSKLPL
Trigger: CAGTGGCAGCTTGCTGAGCAAGGGAGTGTTGCTTTC...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTAGGAAGGCCTTGCTGTaGTTGTCTGGGTGGAAAGTG +
Preference number: 3 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSRKALL*LSGWKV
Trigger: CACTTTCCACCCAGACAACAACAGCAAGGCCTTCCT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCTAATAAAGGCCTGTTaGTCCTTTTCTGCATGGGGT +
Preference number: 3 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYALIKAC*SFSAWG
Trigger: ACCCCATGCAGAAAAGGACAAACAGGCCTTTATTAG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCGAGCACTTGAAACTCTaGATTCTAGCCTTTCTAATC +
Preference number: 3 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAEHLKL*ILAFLI
Trigger: GATTAGAAAGGCTAGAATCAAGAGTTTCAAGTGCTC...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 72 bp AGAGACCTCATGAACACTAAGGCAGATGTTATGCTGTaGAGTCTGACACCCTGGACCTGTGACTTAGTGGTG +
Preference number: 3 (lower is better)
Translates to: RDLMNTKADVML*SLTPWTCDLVV
Trigger: CACCACTAAGTCACAGGTCCAGGGTGTCAGACTTCACAGCATAACATCTGCCTTAGTGTTCATGAGGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 72 bp GCCACACAAGCATGCAATGCCAGTCTTAAAAGACAATaGCCGCATCTTTCCGCTGCGACCACTATCAAAAAC +
Preference number: 3 (lower is better)
Translates to: ATQACNASLKRQ*PHLSAATTIKN
Trigger: GTTTTTGATAGTGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTTGTGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR GCA 72 bp CTTCCTGTTAGATTCTCTGTGACCACAGGTTTCTGTTaGTTTGGTCTTGAGGACAGCCCACCCCAAACATCA +
Preference number: 3 (lower is better)
Translates to: LPVRFSVTTGFC*FGLEDSPPQTS
Trigger: TGATGTTTGGGGTGGGCTGTCCTCAAGACCAAAGCAACAGAAACCTGTGGTCACAGAGAATCTAACAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 72 bp CAAAGGCTAATAAAGGCCTGTTTGTCCTTTTCTGCATaGGGTGGGCAGAGCTTGGGTTTGCTCTATTTTGGC +
Preference number: 3 (lower is better)
Translates to: QRLIKACLSFSA*GGQSLGLLYFG
Trigger: GCCAAAATAGAGCAAACCCAAGCTCTGCCCACCCCATGCAGAAAAGGACAAACAGGCCTTTATTAGCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 72 bp CAATGCCCAATCAATGTGAATCCACTCTGCTGTCACTaGAAGCAGAGGTATCCTCGTAATGGCTTTTTGGCC +
Preference number: 3 (lower is better)
Translates to: QCPINVNPLCCH*KQRYPRNGFLA
Trigger: GGCCAAAAAGCCATTACGAGGATACCTCTGCTTCCAGTGACAGCAGAGTGGATTCACATTGATTGGGCATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATTTTGCCTCCCTGAGTaGCGCCAGAGAGTAGGGGTA +
Preference number: 3 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTFCLPE*RQRVGV
Trigger: TACCCCTACTCTCTGGCGCAACTCAGGGAGGCAAAA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCCAGCCTGGAAGGGTGTaGGATGGCAGTCATACTACT +
Preference number: 3 (lower is better)
Translates to: TSMERDILGEQPGYIYLSQPGRV*DGSHTT
Trigger: AGTAGTATGACTGCCATCCAACACCCTTCCAGGCTG...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAAAGGCCTTGCTGTTGTaGTCTGGGTGGAAAGTGGCC +
Preference number: 3 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPKALLL*SGWKVA
Trigger: GGCCACTTTCCACCCAGACAACAACAGCAAGGCCTT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAACATACAACACATTTaGGTAAATCCAACCCCAAGT +
Preference number: 3 (lower is better)
Translates to: LLGLASSWPQGFSFLCPANIQHI*VNPTPS
Trigger: ACTTGGGGTTGGATTTACCAAAATGTGTTGTATGTT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCAGCTGAGAACTTAATGTaGTTCAGATCAGCTAGGGTT +
Preference number: 3 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPAENLM*FRSARV
Trigger: AACCCTAGCTGATCTGAACAACATTAAGTTCTCAGC...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR-3UTR CAA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATACTACTCCAGACTaGAGGTGGGCTTCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPHTTPD*RWASSS
Trigger: GGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTATG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCAGCCTGGAAGGGTGTaGGATGGCAGTCATACTACT +
Preference number: 3 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSQPGRV*DGSHTT
Trigger: AGTAGTATGACTGCCATCCAACACCCTTCCAGGCTG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTTCACATTCCTTATCATaGATGCTAATCCCACAGTCA +
Preference number: 3 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFSHSLS*MLIPQS
Trigger: TGACTGTGGGATTAGCATCAATGATAAGGAATGTGA...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTGAAGAAAATGAGCACTaGAAACTCTTGATTCTAGCC +
Preference number: 3 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFEENEH*KLLILA
Trigger: GGCTAGAATCAAGAGTTTCAAGTGCTCATTTTCTTC...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 72 bp ATTGTGGTGGCAACTGTTGCTTTCTTTAGCCCTGAGTaGGACCATAAGAGCTGGAAGGGACCAGAGAATGTT +
Preference number: 3 (lower is better)
Translates to: IVVATVAFFSPE*DHKSWKGPENV
Trigger: AACATTCTCTGGTCCCTTCCAGCTCTTATGGTCTCACTCAGGGCTAAAGAAAGCAACAGTTGCCACCACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 72 bp GTCAGTGACCCCTTAGTGAGAATTCAACTCTTGACCTaGTGCTTCAGTCCACCTACAACGCAAATCCTACAT +
Preference number: 3 (lower is better)
Translates to: VSDPLVRIQLLT*CFSPPTTQILH
Trigger: ATGTAGGATTTGCGTTGTAGGTGGACTGAAGCAGCAGGTCAAGAGTTGAATTCTCACTAAGGGGTCACTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 72 bp GGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTaGGCTCTGAATCTATTCAACATTCCCAAGCCCACT +
Preference number: 3 (lower is better)
Translates to: GYKAPLGRKLPK*ALNLFNIPKPT
Trigger: AGTGGGCTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 72 bp GGGTTTCTCATTTCTGTGTCCTGCCAACCCATTTCCTaGAGCACCAGAAACTCAAACAGATTTCTCTGTAGG +
Preference number: 3 (lower is better)
Translates to: GFLISVSCQPIS*STRNSNRFLCR
Trigger: CCTACAGAGAAATCTGTTTGAGTTTCTGGTGCTCCAGGAAATGGGTTGGCAGGACACAGAAATGAGAAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGGGGCTGATCTCGAACTaGAAGATTAAAGGGAACATT +
Preference number: 3 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKGLISN*KIKGNI
Trigger: AATGTTCCCTTTAATCTTCAAGTTCGAGATCAGCCC...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTAACATACAACACATTTaGGTAAATCCAACCCCAAGT +
Preference number: 3 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFNIQHI*VNPTPS
Trigger: ACTTGGGGTTGGATTTACCAAAATGTGTTGTATGTT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 72 bp GGTAGCATTAGGATGGCTAGCAATCTGTCCTGGAGCTaGAGTAATAGAACACACACTGCCCAGACTTTTTCA +
Preference number: 3 (lower is better)
Translates to: GSIRMASNLSWS*SNRTHTAQTFS
Trigger: TGAAAAAGTCTGGGCAGTGTGTGTTCTATTACTTCAGCTCCAGGACAGATTGCTAGCCATCCTAATGCTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 72 bp CTGAAGTTTTTCCTTCACTTCCGTGCCACACAAGCATaGAATGCCAGTCTTAAAAGACAATGCCCGCATCTT +
Preference number: 3 (lower is better)
Translates to: LKFFLHFRATQA*NASLKRQCPHL
Trigger: AAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTTGTGTGGCACGGAAGTGAAGGAAAAACTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR GCA 72 bp AGTGACCCCTTAGTGAGAATTCAACTCTTGACCTGCTaGTTCAGTCCACCTACAACGCAAATCCTACATAAC +
Preference number: 3 (lower is better)
Translates to: SDPLVRIQLLTC*FSPPTTQILHN
Trigger: GTTATGTAGGATTTGCGTTGTAGGTGGACTGAAGCAGCAGGTCAAGAGTTGAATTCTCACTAAGGGGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 72 bp AGAATTCAAGGGAAAGGGGGAAAGCACCACAGTGAGTaGCAATCAAAGTTAACCAATTTGTTCCCAACCCTG +
Preference number: 3 (lower is better)
Translates to: RIQGKGGKHHSE*QSKLTNLFPTL
Trigger: CAGGGTTGGGAACAAATTGGTTAACTTTGATTGCCACTCACTGTGGTGCTTTCCCCCTTTCCCTTGAATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAAAGGCCTTGCTGTTGTaGTCTGGGTGGAAAGTGGCC +
Preference number: 3 (lower is better)
Translates to: QFEDWIHLPELEITILGTKALLL*SGWKVA
Trigger: GGCCACTTTCCACCCAGACAACAACAGCAAGGCCTT...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 72 bp ACTCCCCCACCCCTACTATCTATTCTGAACAGTTTCTaGATAAAGAGATCATGGTATATGTCGCCTAGGAAG +
Preference number: 3 (lower is better)
Translates to: TPPPLLSILNSF*IKRSWYMSPRK
Trigger: CTTCCTAGGCGACATATACCATGATCTCTTTATCCAGAAACTGTTCAGAATAGATAGTAGGGGTGGGGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAGTTATAAAGCTCCTCTaGGGAGAAAGCTGCCTAAGT +
Preference number: 3 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPVIKLL*GESCLS
Trigger: ACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAAC...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTTGGGTTTGCTCTATTTaGGCACCTGAACCATTTAGG +
Preference number: 3 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSWVCSI*APEPFR
Trigger: CCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCA...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATGGGTTTGCTCTATTTaGGCACCTGAACCATTTAGG +
Preference number: 3 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTWVCSI*APEPFR
Trigger: CCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACTAATAAAGGCCTGTTaGTCCTTTTCTGCATGGGGT +
Preference number: 3 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPLIKAC*SFSAWG
Trigger: ACCCCATGCAGAAAAGGACAAACAGGCCTTTATTAG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCACTGTCCCTGGACCCTaGAACAATACACTCACCTTA +
Preference number: 3 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLTVPGP*NNTLTL
Trigger: TAAGGTGAGTGTATTGTTCAAGGGTCCAGGGACAGT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 72 bp GTCACTGGAAGCAGAGGTATCCTCGTAATGGCTTTTTaGCCTCTATCAAATTCTGTCAAGAAGAAATCACCT +
Preference number: 3 (lower is better)
Translates to: VTGSRGILVMAF*PLSNSVKKKSP
Trigger: AGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAGGATACCTCTGCTTCCAGTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGGGCTGATCTCGAACTaGAAGATTAAAGGGAACATT +
Preference number: 3 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSGLISN*KIKGNI
Trigger: AATGTTCCCTTTAATCTTCAAGTTCGAGATCAGCCC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 72 bp CATGGTATATGTCGCCTAGGAAGAGCTAGTTCAGTTTaGGGATTGGATTCACCTTCCAGAGTTAGAAATAAC +
Preference number: 3 (lower is better)
Translates to: HGICRLGRASSV*GLDSPSRVRNN
Trigger: GTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTGAACTAGCTCTTCCTAGGCGACATATACCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR TCA 72 bp TTTAATGCTTCCAAATATAACGTAGAAGAACCAGAATaGACTGTTCTCCCCTTAAGGAAGGTCTGTCAGGGA +
Preference number: 3 (lower is better)
Translates to: FNASKYNVEEPE*TVLPLRKVCQG
Trigger: TCCCTGACAGACCTTCCTTAAGGGGAGAACAGTTCATTCTGGTTCTTCTACGTTATATTTGGAAGCATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAGGGCTGATCTCGAACTaGAAGATTAAAGGGAACATT +
Preference number: 3 (lower is better)
Translates to: QFEDWIHLPELEITILGTGLISN*KIKGNI
Trigger: AATGTTCCCTTTAATCTTCAAGTTCGAGATCAGCCC...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR-3UTR CAA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCAACATACAACACATTTaGGTAAATCCAACCCCAAGT +
Preference number: 3 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLNIQHI*VNPTPS
Trigger: ACTTGGGGTTGGATTTACCAAAATGTGTTGTATGTT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CCA 72 bp AACATACAACACATTTTGGTAAATCCAACCCCAAGTTaGATTCATAGTACCCAAGGATCCATTTACCTTACT +
Preference number: 3 (lower is better)
Translates to: NIQHILVNPTPS*IHSTQGSIYLT
Trigger: AGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAACTTGGGGTTGGATTTACCAAAATGTGTTGTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR GCA 72 bp GTGAACCATTTGCTGGCATACCATTTAGTACATAGGTaGTCTTACACCTATGTTCTTCTATACATTTTTGTA +
Preference number: 3 (lower is better)
Translates to: VNHLLAYHLVHR*SYTYVLLYIFV
Trigger: TACAAAAATGTATAGAAGAACATAGGTGTAAGAGCACCTATGTACTAAATGGTATGCCAGCAAATGGTTCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCACTGGGGCTCCAGGTTaGCCCACTCCAGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAATGAPG*PTPGTG
Trigger: CCCAGTTCCTGGAGTGGGTCAACCTGGAGCCCCAGT...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCCCCTTCTCCCGGGGGTaGCTGCCTTCTGACTGCTGT +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAPFSRG*LPSDCC
Trigger: ACAGCAGTCAGAAGGCAGTCACCCCCGGGAGAAGGG...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCCCATGCCTGGCCCACTaGAGTTGCCACAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAPCLAH*SCHRPS
Trigger: TGAGGGCCTGTGGCAACTGCAGTGGGCCAGGCATGG...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCGGCCTGTGGCTCCTATaGAGGGGCCACTACACACGG +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAGLWLL*RGHYTR
Trigger: CCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGGCC...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCCTTCGAGGATCTGCATaGGCGTCTCCAGGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAALRGSA*ASPGGS
Trigger: AGAGCCGCCTGGAGACGCGCATGCAGATCCTCGAAG...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTCTGGCCCACTGCAGTTaGCACAGGCCCTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLLAHCS*HRPSAA
Trigger: GGCTGCTGAGGGCCTGTGGCAACTGCAGTGGGCCAG...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCCCTTGATGGGGCACTGCCTACAGATAGAGCACTTGGTCTGATGCTTCACTTGGCGGCAGCTGTAAGCTaGGAGGCCGGGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLDGALPTDRALGLMLHLAAAVS*EAGAGL
Trigger: CAGCCCAGCCCCGGCCTCCCAGCTTACAGCTGCCGC...CAAGTGAAGCATCAGACCAAGTGCTCTATCTGTAGGCAGTGCCCCATCAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCGGCCCAAAGTCCCGGTaGGCATCCTGGAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAGPKSR*ASWSCL
Trigger: TAAGCAGCTCCAGGATGCCCACCGGGACTTTGGGCC...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTCCCTTCTCCCGGGGGTaGCTGCCTTCTGACTGCTGT +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLPFSRG*LPSDCC
Trigger: ACAGCAGTCAGAAGGCAGTCACCCCCGGGAGAAGGG...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTGCTGCCTCCTCATGCTaGCACTTCAGGCGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLAASSC*HFRRLS
Trigger: GCTGAGGCGCCTGAAGTGGCAGCATGAGGAGGCAGC...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCATTGCGGTGGTCTGTTaGTGCCTCAGTGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAIAVVC*CLSGAV
Trigger: GACGGCTCCACTGAGGCAGCAACAGACCACCGCAAT...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCAGCCTGCAGAGCCACTaGCATCTGATTCGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAASLQSH*HLIRWV
Trigger: CACCCACCGAATCAGATGGCAGTGGCTCTGCAGGCT...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCTGGGAGGCCGGGGCTaGGCTGCCTCTGTGAATCAG +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPALGGRG*AASVNQ
Trigger: CTGATTCACAGAGGCAGCCCAGCCCCGGCCTCCCAG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGCGGCAGCTGTAAGCTaGGAGGCCGGGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGAAAVS*EAGAGL
Trigger: CAGCCCAGCCCCGGCCTCCCAGCTTACAGCTGCCGC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTAGCCGTCAGCCAGACTaGGTGCCTCAGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLSRQPD*VPQLPP
Trigger: AGGAGGCAGCTGAGGCACCCAGTCTGGCTGACGGCT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCAGGGATGCCGACAGCTaGTGTATGCACACTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAARDADS*CMHTLP
Trigger: AGGGAGAGTGTGCATACAGCAGCTGTCGGCATCCCT...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTCTGGCCACCGTCGCCTaGTTCCATACAAAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLLATVA*FHTKRL
Trigger: CAGCCGCTTTGTATGGAAGCAGGCGACGGTGGCCAG...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCTGCCTTTGCTGGCCCTaGCTGTCAAGAAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAACLCWP*LSRSRS
Trigger: AGACCTGCTTCTTGACAGGCAGGGCCAGCAAAGGCA...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCCCAGAAGCTCCTCATTaGGGTGGTCTGTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAPEAPH*GGLLLP
Trigger: AGGCAGCAACAGACCACCGCAATGAGGAGCTTCTGG...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTTGGCGCTGGTCACACTaGCTGCCTGAGTTGGCCACT +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLWRWSH*LPELAT
Trigger: AGTGGCCAACTCAGGCAGCCAGTGTGACCAGCGCCA...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAGCCGTCAGCCAGACTaGGTGCCTCAGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPASRQPD*VPQLPP
Trigger: AGGAGGCAGCTGAGGCACCCAGTCTGGCTGACGGCT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCCAGAGGAGCAAAGGGTaGCTTCAGCCAGGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAQRSKG*LQPGFQ
Trigger: CTGGAAACCTGGCTGAAGCCACCCTTTGCTCCTCTG...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCAGAAGGGTCACAGCCTaGAAGGGTGTTGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAARRVTA*KGVGWQ
Trigger: CTGCCATCCAACACCCTTCCAGGCTGTGACCCTTCT...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTGTTTCCATCGGACGTTaGTCTGTTCCAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLVSIGR*SVPGPG
Trigger: CCCAGGCCCTGGAACAGATCAACGTCCGATGGAAAC...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCCCTTGATGGGGCACTGCCTACAGATAGAGCACTTGGTCTGATGCTTCACTTGACTGGGGCTCCAGGTTaGCCCACTCCAGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: PLDGALPTDRALGLMLHLTGAPG*PTPGTG
Trigger: CCCAGTTCCTGGAGTGGGTCAACCTGGAGCCCCAGT...CAAGTGAAGCATCAGACCAAGTGCTCTATCTGTAGGCAGTGCCCCATCAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp ACCAGGGCCCCAGGGGATAACAATAGACTCTCCAGGAAGATGGCTGAGGTTCTGAGGCCGGGGCTGGGCTaGCTCTGTGAATCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: TRAPGDNNRLSRKMAEVLRPGLG*LCESAK
Trigger: CTTTGCTGATTCACAGAGGCAGCCCAGCCCCGGCCT...CAGAACCTCAGCCATCTTCCTGGAGAGTCTATTGTTATCCCCTGGGGCCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCACCACATCCATCACGTaGTCACTGGCCTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAATTSIT*SLACRS
Trigger: TGATCTGCAGGCCAGTGAGCACGTGATGGATGTGGT...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCCCCTTGATGGGGCACTaGCTACAGATAGAGCACTTG +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAPLMGH*LQIEHL
Trigger: CAAGTGCTCTATCTGTAGGCAGTGCCCCATCAAGGG...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTACACTGCATGGAGCCTaGTGTCCAAAGGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLTLHGA*CPKAGS
Trigger: GGAGCCAGCCTTTGGACAGCAGGCTCCATGCAGTGT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGGCGGTGGTCTGTTGCTaGCTCAGTGGAGCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRAVVCC*LSGAVS
Trigger: GCTGACGGCTCCACTGAGGCAGCAACAGACCACCGC...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCCCAAGCCACTGCCCTaGCTCCCCTGCAGCAGATCA +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRPKPLP*LPCSRS
Trigger: TGATCTGCTGCAGGGGAGGCAGGGCAGTGGCTTGGG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCTCCAACACAGATTCATaGCTGGTGGTTCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAASNTDS*LVVPGV
Trigger: GACCCCTGGAACCACCAGCCATGAATCTGTGTTGGA...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTTCCCGGTGGGCATCCTaGAGCTGCTTAAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLSRWAS*SCLSLS
Trigger: TGAGAGGCTTAAGCAGCTCCAGGATGCCCACCGGGA...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCGGCCCAAAGTCCCGGTaGGCATCCTGGAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAGPKSR*ASWSCL
Trigger: TAAGCAGCTCCAGGATGCCCACCGGGACTTTGGGCC...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCCCATCACGTGCTCACTaGCCTGCAGATCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAPSRAH*PADHAH
Trigger: ATGAGCATGATCTGCAGGCCAGTGAGCACGTGATGG...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAGCCACACCATGGACTaGGGCTCCAGGTTGACCCAC +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPASHTMD*GSRLTH
Trigger: GTGGGTCAACCTGGAGCCCCAGTCCATGGTGTGGCT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCGTGTGTGTCGGCGTGTaGCCACATCGGGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAVCVGV*PHRGRS
Trigger: GCTTCTTCCCCGATGTGGCCACACGCCGACACACAC...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCTGCTGTCCAAAGGCTaGCTCCCGGTCTGTGATGGG +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPALLSKG*LPVCDG
Trigger: CCCATCACAGACCGGGAGCCAGCCTTTGGACAGCAG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTTGTGGCCACACTGCATaGAGCCTGCTGTCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLCGHTA*SLLSKG
Trigger: GCCTTTGGACAGCAGGCTCCATGCAGTGTGGCCACA...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCTTGTCCTTTTCTGCATaGGGTGGGCAGAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAALSFSA*GGQSLG
Trigger: ACCCAAGCTCTGCCCACCCCATGCAGAAAAGGACAA...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGACCCCAGCACCATCTTaGGGAGGTGCAGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGTPAPS*GGAGLV
Trigger: CACCAGCCCTGCACCTCCTCAAGATGGTGCTGGGGT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACCCTGTAGGGGCAGCTaGGCTGACAACTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGPCRGS*ADNSSS
Trigger: GGATGAGGAGTTGTCAGCTCAGCTGCCCCTACAGGG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCTCCATACAAAGCGGCTaGGATTCTGGATCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAASIQSG*DSGSAV
Trigger: AACAGCGGATCCAGAATCTCAGCCGCTTTGTATGGA...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp ACCAGGGCCCCAGGGGATAACAATAGACTCTCCAGGAAGATGGCTGAGGTTCTGAGAGTCCGCTCAATGTaGCGGTGCTGGTCCACACAG +
Preference number: 4 (lower is better)
Translates to: TRAPGDNNRLSRKMAEVLRVRSM*RCWSTQ
Trigger: CTGTGTGGACCAGCACCGTCACATTGAGCGGACTCT...CAGAACCTCAGCCATCTTCCTGGAGAGTCTATTGTTATCCCCTGGGGCCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAGAGTCCGCTCAATGTaGCGGTGCTGGTCCACACAG +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPARVRSM*RCWSTQ
Trigger: CTGTGTGGACCAGCACCGTCACATTGAGCGGACTCT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCGCAGATCATGCTCATTaGAGATTTCCAGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAADHAH*RFPGLW
Trigger: CCACAGCCCTGGAAATCTTCAATGAGCATGATCTGC...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGACTGGGGCTCCAGGTTaGCCCACTCCAGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGTGAPG*PTPGTG
Trigger: CCCAGTTCCTGGAGTGGGTCAACCTGGAGCCCCAGT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCAGGCAAAAATACCCTTaGCTGGGCAAACGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAARQKYP*LGKRRK
Trigger: CTTCCTGCGTTTGCCCAGTCAAGGGTATTTTTGCCT...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000402866.5
CDS-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAAGAGCCACTGCCATCTaGTTCGGTGGGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGRATAI*FGGWLQ
Trigger: CTGCAGCCACCCACCGAATCAGATGGCAGTGGCTCT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCCCTTCTCCCGGGGGTaGCTGCCTTCTGACTGCTGT +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFPFSRG*LPSDCC
Trigger: ACAGCAGTCAGAAGGCAGTCACCCCCGGGAGAAGGG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCCCTTCTCCCGGGGGTaGCTGCCTTCTGACTGCTGT +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGPFSRG*LPSDCC
Trigger: ACAGCAGTCAGAAGGCAGTCACCCCCGGGAGAAGGG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCCTCCAAGCACAGGCTaGCATCCTGGCTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAPPSTG*HPGSLT
Trigger: GGTCAAAGAGCCAGGATGTCAGCCTGTGCTTGGAGG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCGCTGAGGAAAGGCTTTaGCCGGAACCAGGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAAEERL*PEPGED
Trigger: GTCCTCTCCTGGTTCCGGTCAAAGCCTTTCCTCAGC...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCACCCTTTTGCCTCCCTaGGTTGCGCCAGAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPATLLPP*VAPESR
Trigger: CCTACTCTCTGGCGCAACTCAGGGAGGCAAAAGGGT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAAGTGGCCAGCTTCCTaGTTTGTGGCCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAKWPAS*FVACGS
Trigger: GGAGCCACAGGCCACAAATCAGGAAGCTGGCCACTT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCCCAGGTTCTATGATTaGTGCCCGCCTACCACCTGC +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAPRFYD*CPPTTC
Trigger: GCAGGTGGTAGGCGGGCATCAATCATAGAACCTGGG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAATGGACTCTGCGAGCTaGGCCCTGGCCTTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGMDSAS*ALALSL
Trigger: AAGGCTCAAGGCCAGGGCTCAGCTCGCAGAGTCCAT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGAGGCCGGGGCTGGGCTaGCTCTGTGAATCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRRPGLG*LCESAK
Trigger: CTTTGCTGATTCACAGAGGCAGCCCAGCCCCGGCCT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000541709.5
CDS-3UTR GCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTGAGGGTGGGGGCAGGTaGTTCGGAGGCTGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAEGGGR*FGGCCY
Trigger: ATAGCAGCAGCCTCCGAAGCACCTGCCCCCACCCTC...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR GCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCTGGCCACCGTCGCCTaGTTCCATACAAAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRLATVA*FHTKRL
Trigger: CAGCCGCTTTGTATGGAAGCAGGCGACGGTGGCCAG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp ACCAGGGCCCCAGGGGATAACAATAGACTCTCCAGGAAGATGGCTGAGGTTCTGTGGGCTCCACATTGCTaGCCCCAAAGGCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: TRAPGDNNRLSRKMAEVLWAPHC*PQRLPL
Trigger: AAGTGGCAGCCTTTGGGGGCAGCAATGTGGAGCCCA...CAGAACCTCAGCCATCTTCCTGGAGAGTCTATTGTTATCCCCTGGGGCCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCTGGGCTCCACATTGCTaGCCCCAAAGGCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAWAPHC*PQRLPL
Trigger: AAGTGGCAGCCTTTGGGGGCAGCAATGTGGAGCCCA...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAGTCAGCCAGACTGGGTaGCTCAGCTGCCTCCTCATG +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGVSQTG*LSCLLM
Trigger: CATGAGGAGGCAGCTGAGGCACCCAGTCTGGCTGAC...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTCCCTTCTCCCATCACTaGCCGCATGCACCTCACATA +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLPFSHH*PHAPHI
Trigger: TATGTGAGGTGCATGCGGGCAGTGATGGGAGAAGGG...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCCCAAGCCACTGCCCTaGCTCCCCTGCAGCAGATCA +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAPKPLP*LPCSRS
Trigger: TGATCTGCTGCAGGGGAGGCAGGGCAGTGGCTTGGG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGCTGGCCCACTGCAGTTaGCACAGGCCCTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWLAHCS*HRPSAA
Trigger: GGCTGCTGAGGGCCTGTGGCAACTGCAGTGGGCCAG...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCCAACTCTTGACCTGCTaGTTCAGTCCACCTACAACG +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAQLLTC*FSPPTT
Trigger: CGTTGTAGGTGGACTGAAGCAGCAGGTCAAGAGTTG...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCCTCATTTCTGTGTCCTaGCAACCCATTTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAALISVS*QPISWS
Trigger: GCTCCAGGAAATGGGTTGGCAGGACACAGAAATGAG...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCTCCCCTAGACTTCCATaGCACCCTTGTCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPASPRLP*HPCHLP
Trigger: GGGGAGGTGACAAGGGTGGCATGGAAGTCTAGGGGA...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAAGGTACTGGGAGGCCGGGGCTaGGCTGCCTCTGTGAATCAG +
Preference number: 4 (lower is better)
Translates to: KLLFPREPGQRCFSDVKVLGGRG*AASVNQ
Trigger: CTGATTCACAGAGGCAGCCCAGCCCCGGCCTCCCAG...TACCTTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp ACCAGGGCCCCAGGGGATAACAATAGACTCTCCAGGAAGATGGCTGAGGTTCTGCAGATTCATGGCTGGTaGTTCCAGGGGTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TRAPGDNNRLSRKMAEVLQIHGW*FQGSRG
Trigger: GCCTCTGGACCCCTGGAACCACCAGCCATGAATCTG...CAGAACCTCAGCCATCTTCCTGGAGAGTCTATTGTTATCCCCTGGGGCCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCAGATTCATGGCTGGTaGTTCCAGGGGTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAQIHGW*FQGSRG
Trigger: GCCTCTGGACCCCTGGAACCACCAGCCATGAATCTG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTAAGCGGCTGAGATTCTaGATCCGCTGTTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLKRLRF*IRCFGE
Trigger: CTCCCCGAAACAGCGGATCCAGAATCTCAGCCGCTT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCCCTTGATGGGGCACTGCCTACAGATAGAGCACTTGGTCTGATGCTTCACTTGTCTCCCACAGTTCACTaGCCACCGTCGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PLDGALPTDRALGLMLHLSPTVH*PPSPAS
Trigger: GGAAGCAGGCGACGGTGGCCAGTGAACTGTGGGAGA...CAAGTGAAGCATCAGACCAAGTGCTCTATCTGTAGGCAGTGCCCCATCAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAGGCCCAAAGTCCCGGTaGGCATCCTGGAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGGPKSR*ASWSCL
Trigger: TAAGCAGCTCCAGGATGCCCACCGGGACTTTGGGCC...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGACACCAAGGTGGCGCTaGTCACACTGGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRTPRWR*SHWLPE
Trigger: CTCAGGCAGCCAGTGTGACCAGCGCCACCTTGGTGT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCTGTTGCTGCCTCAGTaGAGCCGTCAGCCAGACTGG +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRLLLPQ*SRQPDW
Trigger: CCAGTCTGGCTGACGGCTCCACTGAGGCAGCAACAG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACTGTTGCTGCCTCAGTaGAGCCGTCAGCCAGACTGG +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGLLLPQ*SRQPDW
Trigger: CCAGTCTGGCTGACGGCTCCACTGAGGCAGCAACAG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTGGGGCCAGTGGAAACTaGAAAGGTTGGGTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLGASGN*KGWVKA
Trigger: AGCCTTCACCCAACCTTTCCAGTTTCCACTGGCCCC...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTAGAAGGGTCACAGCCTaGAAGGGTGTTGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLRRVTA*KGVGWQ
Trigger: CTGCCATCCAACACCCTTCCAGGCTGTGACCCTTCT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGGCCTGTGGCTCCTATaGAGGGGCCACTACACACGG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGGLWLL*RGHYTR
Trigger: CCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGGCC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCCCACTGGCCCACTGCTaGATTATAATACAACACCCC +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAPLAHC*IIIQHP
Trigger: GGGGTGTTGTATTATAATCCAGCAGTGGGCCAGTGG...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCGGATTGGCCTCTTCCTaGCCTCAGGGTTTCTCATTT +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAGLASS*PQGFSF
Trigger: AAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCC...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCAGCAAAGAAGTCCCTaGGACAGGGATGCCGACAGC +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRQQRSP*DRDADS
Trigger: GCTGTCGGCATCCCTGTCTCAGGGACTTCTTTGCTG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000541709.5
CDS-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACAGCAAAGAAGTCCCTaGGACAGGGATGCCGACAGC +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGQQRSP*DRDADS
Trigger: GCTGTCGGCATCCCTGTCTCAGGGACTTCTTTGCTG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000541709.5
CDS-3UTR TCA 90 bp AAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAAGGTAACCCCAGCACCATCTTaGGGAGGTGCAGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KLLFPREPGQRCFSDVKVTPAPS*GGAGLV
Trigger: CACCAGCCCTGCACCTCCTCAAGATGGTGCTGGGGT...TACCTTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAAGAGTCCGCTCAATGTaGCGGTGCTGGTCCACACAG +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGRVRSM*RCWSTQ
Trigger: CTGTGTGGACCAGCACCGTCACATTGAGCGGACTCT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCGTCAGCCTCCAGCACTaGTTGCACAGGCAGATAACC +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAVSLQH*LHRQIT
Trigger: GGTTATCTGCCTGTGCAATCAGTGCTGGAGGCTGAC...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTGGGGTGACTGCCTTCTaGCTGCTGTGGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFGVTAF*LLWRGS
Trigger: GCTTCCTCTCCACAGCAGTCAGAAGGCAGTCACCCC...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCGACGGAGTTTCTCCATaGTGTCCTCCAAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPADGVSP*CPPSTG
Trigger: GCCTGTGCTTGGAGGACATCATGGAGAAACTCCGTC...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTACACTGGGGAAGGCATaGCGGAGTTTCTCCATGATG +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLTLGKA*RSFSMM
Trigger: CATCATGGAGAAACTCCGTCATGCCTTCCCCAGTGT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCCCAATTTTCATCCTGTaGCCAGTTCTTGTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAPIFIL*PVLVAS
Trigger: GCTGGCTACAAGAACTGGTCACAGGATGAAAATTGG...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCGCTGCGACCACTATCAAAAACATTGAGGAGCCAATTGAGGCTCATGTCCACAGAGGGTGGGGGCAGGTaGTTCGGAGGCTGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: PLRPLSKTLRSQLRLMSTEGGGR*FGGCCY
Trigger: ATAGCAGCAGCCTCCGAAGCACCTGCCCCCACCCTC...TGTGGACATGAGCCTCAATTGGCTCCTCAATGTTTTTGATAGTGGTCGCAGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGAGGGTGGGGGCAGGTaGTTCGGAGGCTGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWEGGGR*FGGCCY
Trigger: ATAGCAGCAGCCTCCGAAGCACCTGCCCCCACCCTC...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGGAGGGTGGGGGCAGGTaGTTCGGAGGCTGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKEGGGR*FGGCCY
Trigger: ATAGCAGCAGCCTCCGAAGCACCTGCCCCCACCCTC...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR GCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCTGGCCACCGTCGCCTaGTTCCATACAAAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYALATVA*FHTKRL
Trigger: CAGCCGCTTTGTATGGAAGCAGGCGACGGTGGCCAG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTACCACATCCATCACGTaGTCACTGGCCTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLTTSIT*SLACRS
Trigger: TGATCTGCAGGCCAGTGAGCACGTGATGGATGTGGT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTGCAGCTTATTGCCTTTaGTGGCCCTGCCTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLAAYCL*WPCLSR
Trigger: TCTTGACAGGCAGGGCCAGCAAAGGCAATAAGCTGC...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCGGTAGTGCAGCTTATTaGCTTTGCTGGCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAGSAAY*LCWPCL
Trigger: CAGGCAGGGCCAGCAAAGGCAATAAGCTGCACTACC...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGTGATGGGGCTGGAGTaGCGCAGCAGGTACTGGTCC +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWVMGLE*RSRYWS
Trigger: GGACCAGTACCTGCTGCGGCACTCCAGCCCCATCAC...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGCTGCCTCCTCATGCTaGCACTTCAGGCGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWAASSC*HFRRLS
Trigger: GCTGAGGCGCCTGAAGTGGCAGCATGAGGAGGCAGC...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGGCGGTGGTCTGTTGCTaGCTCAGTGGAGCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKAVVCC*LSGAVS
Trigger: GCTGACGGCTCCACTGAGGCAGCAACAGACCACCGC...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTATTCCCCACACATACTaGAGTGACTGTCCCTGGACC +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLIPHTY*SDCPWT
Trigger: GGTCCAGGGACAGTCACTGCAGTATGTGTGGGGAAT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCGTCAGGCCTCAATACTaGCATAGGGGACAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAVRPQY*HRGQQG
Trigger: CCCTTGCTGTCCCCTATGGCAGTATTGAGGCCTGAC...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTCCCCTAGACTTCCATaGCACCCTTGTCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRSPRLP*HPCHLP
Trigger: GGGGAGGTGACAAGGGTGGCATGGAAGTCTAGGGGA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAAGCGGCTGAGATTCTaGATCCGCTGTTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAKRLRF*IRCFGE
Trigger: CTCCCCGAAACAGCGGATCCAGAATCTCAGCCGCTT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTCGGACTCCCTCAGCTTaGCTCAGAGTAGTGCTTAGT +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLRTPSA*LRVVLS
Trigger: ACTAAGCACTACTCTGAGCCAAGCTGAGGGAGTCCG...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCAATGGGCTCCCAAGTaGCTCGGACTCCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRQWAPK*LGLPQL
Trigger: AAGCTGAGGGAGTCCGAGCCACTTGGGAGCCCATTG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTAAGCGCAGGGCTTTCTaGACTCTGCGGAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLKRRAF*TLRSFM
Trigger: CATGAAACTCCGCAGAGTCCAGAAAGCCCTGCGCTT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GGTGAAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAATGGCGCTGGTCACACTaGCTGCCTGAGTTGGCCACT +
Preference number: 4 (lower is better)
Translates to: GEIALSQGTWTEVLLGCQWRWSH*LPELAT
Trigger: AGTGGCCAACTCAGGCAGCCAGTGTGACCAGCGCCA...TTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTTGGCGCTGGTCACACTaGCTGCCTGAGTTGGCCACT +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAWRWSH*LPELAT
Trigger: AGTGGCCAACTCAGGCAGCCAGTGTGACCAGCGCCA...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTACACCAAGGTGGCGCTaGTCACACTGGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFTPRWR*SHWLPE
Trigger: CTCAGGCAGCCAGTGTGACCAGCGCCACCTTGGTGT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGGACGGGGCACCTGAATaGCCTCATGAAGCAGGACAC +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRDGAPE*PHEAGH
Trigger: GTGTCCTGCTTCATGAGGCCATTCAGGTGCCCCGTC...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAGACGGGGCACCTGAATaGCCTCATGAAGCAGGACAC +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGDGAPE*PHEAGH
Trigger: GTGTCCTGCTTCATGAGGCCATTCAGGTGCCCCGTC...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAGCCACACCATGGACTaGGGCTCCAGGTTGACCCAC +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGSHTMD*GSRLTH
Trigger: GTGGGTCAACCTGGAGCCCCAGTCCATGGTGTGGCT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTGTGTGTGTCGGCGTGTaGCCACATCGGGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFVCVGV*PHRGRS
Trigger: GCTTCTTCCCCGATGTGGCCACACGCCGACACACAC...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCTGCTGTCCAAAGGCTaGCTCCCGGTCTGTGATGGG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGLLSKG*LPVCDG
Trigger: CCCATCACAGACCGGGAGCCAGCCTTTGGACAGCAG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCTGTTGCTGCCTCAGTaGAGCCGTCAGCCAGACTGG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGLLLPQ*SRQPDW
Trigger: CCAGTCTGGCTGACGGCTCCACTGAGGCAGCAACAG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAGCTCCTCATTGCGGTaGTCTGTTGCTGCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPASSSLR*SVAASV
Trigger: CACTGAGGCAGCAACAGACCACCGCAATGAGGAGCT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCTGGAAGGGTGTTGGATaGCAGTCATACTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAWKGVG*QSYYSR
Trigger: TCTGGAGTAGTATGACTGCCATCCAACACCCTTCCA...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTCAGCTTCCTGATTTGTaGCCTGTGGCTCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLQLPDL*PVAPME
Trigger: CTCCATAGGAGCCACAGGCCACAAATCAGGAAGCTG...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAGCAACCCTAAGCTTCTaGACCCAAGCCACTGCCCTG +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGATLSF*TQATAL
Trigger: CAGGGCAGTGGCTTGGGTCCAGAAGCTTAGGGTTGC...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTACCCCAGCACCATCTTaGGGAGGTGCAGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFTPAPS*GGAGLV
Trigger: CACCAGCCCTGCACCTCCTCAAGATGGTGCTGGGGT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTTCACTTGCTCAGCAATGGTGACCCGATGCAGAACAGCCAGCCACACCATGGACAGGAAGGCCTGAGCTaGCTCCAGCACAGAATAGAT +
Preference number: 4 (lower is better)
Translates to: LHLLSNGDPMQNSQPHHGQEGLS*LQHRID
Trigger: ATCTATTCTGTGCTGGAGTCAGCTCAGGCCTTCCTG...TCCATGGTGTGGCTGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTCCTCCATTGCCCCTTaGATCTCCAAGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRSSIAP*ISKSCS
Trigger: GGAGCAGCTCTTGGAGATTCAAGGGGCAATGGAGGA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTGATGTGCTCTGGGAGTaGATCAATGAAGAGATCCCC +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLDVLWE*INEEIP
Trigger: GGGGATCTCTTCATTGATTCACTCCCAGAGCACATC...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCACAGAGTGGCACGTTaGCCAGGATGCCTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRHRVAR*PGCLFP
Trigger: AGGAAAGAGGCATCCTGGTCAACGTGCCACTCTGTG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGAGAGCCACTGCCATCTaGTTCGGTGGGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWRATAI*FGGWLQ
Trigger: CTGCAGCCACCCACCGAATCAGATGGCAGTGGCTCT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGGGGTGACTGCCTTCTaGCTGCTGTGGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWGVTAF*LLWRGS
Trigger: GCTTCCTCTCCACAGCAGTCAGAAGGCAGTCACCCC...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCCTCCAAGCACAGGCTaGCATCCTGGCTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAPPSTG*HPGSLT
Trigger: GGTCAAAGAGCCAGGATGTCAGCCTGTGCTTGGAGG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCCTCCAAGCACAGGCTaGCATCCTGGCTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFPPSTG*HPGSLT
Trigger: GGTCAAAGAGCCAGGATGTCAGCCTGTGCTTGGAGG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAGACGGAGTTTCTCCATaGTGTCCTCCAAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGDGVSP*CPPSTG
Trigger: GCCTGTGCTTGGAGGACATCATGGAGAAACTCCGTC...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCACACTGGGGAAGGCATaGCGGAGTTTCTCCATGATG +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPATLGKA*RSFSMM
Trigger: CATCATGGAGAAACTCCGTCATGCCTTCCCCAGTGT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCTGCCTAAGTGGGCTCTaGATCTATTCAACATTCCCA +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAACLSGL*IYSTFP
Trigger: TGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCA...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACTGTTGCTTTGGTCTTaGGGACAGCCCACCCCAAAC +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGLLLWS*GQPTPN
Trigger: GTTTGGGGTGGGCTGTCCTCAAGACCAAAGCAACAG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGACACCCTGGACCTGTaGCTTAGTGGTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWDTLDL*LSGGGG
Trigger: GCCTCCTCCACCACTAAGTCACAGGTCCAGGGTGTC...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGGACACCCTGGACCTGTaGCTTAGTGGTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKDTLDL*LSGGGG
Trigger: GCCTCCTCCACCACTAAGTCACAGGTCCAGGGTGTC...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTTTATGCTGTGAAGTCTaGCACCCTGGACCTGTGACT +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLLCCEV*HPGPVT
Trigger: AGTCACAGGTCCAGGGTGTCAGACTTCACAGCATAA...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCCCAGGTTCTATGATTaGTGCCCGCCTACCACCTGC +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFPRFYD*CPPTTC
Trigger: GCAGGTGGTAGGCGGGCATCAATCATAGAACCTGGG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGGATGCCCAGGTTCTATaGTTGATGCCCGCCTACCAC +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRDAQVL*LMPAYH
Trigger: GTGGTAGGCGGGCATCAATCATAGAACCTGGGCATC...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGATGGACTCTGCGAGCTaGGCCCTGGCCTTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKMDSAS*ALALSL
Trigger: AAGGCTCAAGGCCAGGGCTCAGCTCGCAGAGTCCAT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTGTGGTTAAAGTTACCAGGTCCAAGCGCAGGGCTTTCTGGACTCTGCGGAGTTAGGGATGCCGACAGCTaGTGTATGCACACTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LWLKLPGPSAGLSGLCGVRDADS*CMHTLP
Trigger: AGGGAGAGTGTGCATACAGCAGCTGTCGGCATCCCT...AACTCCGCAGAGTCCAGAAAGCCCTGCGCTTGGACCTGGTAACTTTAACCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGAGGCCGGGGCTGGGCTaGCTCTGTGAATCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWRPGLG*LCESAK
Trigger: CTTTGCTGATTCACAGAGGCAGCCCAGCCCCGGCCT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCTGCTTCGGAGGCTGCTaGTATGATGGAACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPACFGGC*YDGTGQ
Trigger: CTGACCAGTTCCATCATAGCAGCAGCCTCCGAAGCA...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR GCA 90 bp CTTCACTTGCTCAGCAATGGTGACCCGATGCAGAACAGCCAGCCACACCATGGACTCCAGGAACTGGGATaGTTCAATGACTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LHLLSNGDPMQNSQPHHGLQELG*FNDWLP
Trigger: GGGAAGCCAGTCATTGAAGCATCCCAGTTCCTGGAG...TCCATGGTGTGGCTGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCATGTCAACGTTGAATTaGTTCAGACTCCGGTACCTG +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAMSTLN*FRLRYL
Trigger: CAGGTACCGGAGTCTGAAGCAATTCAACGTTGACAT...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGGGTAGTGCAGCTTATTaGCTTTGCTGGCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRGSAAY*LCWPCL
Trigger: CAGGCAGGGCCAGCAAAGGCAATAAGCTGCACTACC...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTAGCCTGCTGGCAAAATaGTCAATTCGGGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLSLLAK*SIRECV
Trigger: CACACACTCCCGAATTGAGCATTTTGCCAGCAGGCT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCTTTCTGTGGCCACACTaGATGGAGCCTGCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAFLWPH*MEPAVQ
Trigger: TTGGACAGCAGGCTCCATGCAGTGTGGCCACAGAAA...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGTCAGCTGCCTCCTCATaGTGCCACTTCAGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWSAASS*CHFRRL
Trigger: GAGGCGCCTGAAGTGGCAGCATGAGGAGGCAGCTGA...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGTCAGCCAGACTGGGTaGCTCAGCTGCCTCCTCATG +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWVSQTG*LSCLLM
Trigger: CATGAGGAGGCAGCTGAGGCACCCAGTCTGGCTGAC...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGGCGGTGGTCTGTTGCTaGCTCAGTGGAGCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKAVVCC*LSGAVS
Trigger: GCTGACGGCTCCACTGAGGCAGCAACAGACCACCGC...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGCTTCGAGGATCTGCATaGGCGTCTCCAGGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKLRGSA*ASPGGS
Trigger: AGAGCCGCCTGGAGACGCGCATGCAGATCCTCGAAG...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGAGCTCCCTCAGACGCTaGAGCTGGGACTCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWSSLRR*SWDSSC
Trigger: GCAGCTAGAGTCCCAGCTGCAGCGTCTGAGGGAGCT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAATACCACCAGATCCCTaGTGCTGCCCAGAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGIPPDP*CCPEPK
Trigger: TTTGGGCTCTGGGCAGCAGCAGGGATCTGGTGGTAT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTTCGGGGATACCCTTTTaGCTCCCTGAGTTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFSGIPF*LPELRQ
Trigger: CTGGCGCAACTCAGGGAGGCAAAAGGGTATCCCCGA...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTCCCAAGCCACTGCCCTaGCTCCCCTGCAGCAGATCA +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFPKPLP*LPCSRS
Trigger: TGATCTGCTGCAGGGGAGGCAGGGCAGTGGCTTGGG...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTACATCTTTTCTACCATaGCTGGCCCACTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLTSFLP*LAHCSC
Trigger: GCAACTGCAGTGGGCCAGGCATGGTAGAAAAGATGT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTCTCATTTCTGTGTCCTaGCAACCCATTTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLLISVS*QPISWS
Trigger: GCTCCAGGAAATGGGTTGGCAGGACACAGAAATGAG...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTGTGGTTAAAGTTACCAGGTCCAAGCGCAGGGCTTTCTGGACTCTGCGGAGTTCCAGTCATGACATCGTaGGAGGGTGTAAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: LWLKLPGPSAGLSGLCGVPVMTS*EGVRAS
Trigger: GGATGCCCTTACACCCTCCCACGATGTCATGACTGG...AACTCCGCAGAGTCCAGAAAGCCCTGCGCTTGGACCTGGTAACTTTAACCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCCAGTCATGACATCGTaGGAGGGTGTAAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRPVMTS*EGVRAS
Trigger: GGATGCCCTTACACCCTCCCACGATGTCATGACTGG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCAGATTCATGGCTGGTaGTTCCAGGGGTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAQIHGW*FQGSRG
Trigger: GCCTCTGGACCCCTGGAACCACCAGCCATGAATCTG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCAGATTCATGGCTGGTaGTTCCAGGGGTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGQIHGW*FQGSRG
Trigger: GCCTCTGGACCCCTGGAACCACCAGCCATGAATCTG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp ACCAGGGCCCCAGGGGATAACAATAGACTCTCCAGGAAGATGGCTGAGGTTCTGTCCAACACAGATTCATaGCTGGTGGTTCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: TRAPGDNNRLSRKMAEVLSNTDS*LVVPGV
Trigger: GACCCCTGGAACCACCAGCCATGAATCTGTGTTGGA...CAGAACCTCAGCCATCTTCCTGGAGAGTCTATTGTTATCCCCTGGGGCCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGTCTCCCACAGTTCACTaGCCACCGTCGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWSPTVH*PPSPAS
Trigger: GGAAGCAGGCGACGGTGGCCAGTGAACTGTGGGAGA...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTTCCCGGTGGGCATCCTaGAGCTGCTTAAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFSRWAS*SCLSLS
Trigger: TGAGAGGCTTAAGCAGCTCCAGGATGCCCACCGGGA...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCCATCACGTGCTCACTaGCCTGCAGATCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAPSRAH*PADHAH
Trigger: ATGAGCATGATCTGCAGGCCAGTGAGCACGTGATGG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAAGGTAACACCAAGGTGGCGCTaGTCACACTGGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KLLFPREPGQRCFSDVKVTPRWR*SHWLPE
Trigger: CTCAGGCAGCCAGTGTGACCAGCGCCACCTTGGTGT...TACCTTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGACACCAAGGTGGCGCTaGTCACACTGGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKTPRWR*SHWLPE
Trigger: CTCAGGCAGCCAGTGTGACCAGCGCCACCTTGGTGT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCGCTGCGACCACTATCAAAAACATTGAGGAGCCAATTGAGGCTCATGTCCACAAGCCACACCATGGACTaGGGCTCCAGGTTGACCCAC +
Preference number: 4 (lower is better)
Translates to: PLRPLSKTLRSQLRLMSTSHTMD*GSRLTH
Trigger: GTGGGTCAACCTGGAGCCCCAGTCCATGGTGTGGCT...TGTGGACATGAGCCTCAATTGGCTCCTCAATGTTTTTGATAGTGGTCGCAGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTTCTCAGCAAGCCTGCTaGCAAAATGCTCAATTCGGG +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLSQQAC*QNAQFG
Trigger: CCCGAATTGAGCATTTTGCCAGCAGGCTTGCTGAGA...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTGTGGCCACACTGCATaGAGCCTGCTGTCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGCGHTA*SLLSKG
Trigger: GCCTTTGGACAGCAGGCTCCATGCAGTGTGGCCACA...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTTGTGGCCACACTGCATaGAGCCTGCTGTCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFCGHTA*SLLSKG
Trigger: GCCTTTGGACAGCAGGCTCCATGCAGTGTGGCCACA...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGAGCTCCTCATTGCGGTaGTCTGTTGCTGCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRSSSLR*SVAASV
Trigger: CACTGAGGCAGCAACAGACCACCGCAATGAGGAGCT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACTCAGACGCTGCAGCTaGGACTCTAGCTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGLRRCS*DSSCLL
Trigger: CAACAAGCAGCTAGAGTCCCAGCTGCAGCGTCTGAG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCACAGGCTGACATCCTaGCTCTTTGACCCCACATCA +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAHRLTS*LFDPTS
Trigger: TGATGTGGGGTCAAAGAGCCAGGATGTCAGCCTGTG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGGGGGCCAGTGGAAACTaGAAAGGTTGGGTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRGASGN*KGWVKA
Trigger: AGCCTTCACCCAACCTTTCCAGTTTCCACTGGCCCC...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCTGATTTGTGGCCTGTaGCTCCTATGGAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYALICGL*LLWRGH
Trigger: GTGGCCCCTCCATAGGAGCCACAGGCCACAAATCAG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTCTTGCTGTTGTTGTCTaGGTGGAAAGTGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLLAVVV*VESGQL
Trigger: AAGCTGGCCACTTTCCACCCAGACAACAACAGCAAG...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTGCAACCCTAAGCTTCTaGACCCAAGCCACTGCCCTG +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFATLSF*TQATAL
Trigger: CAGGGCAGTGGCTTGGGTCCAGAAGCTTAGGGTTGC...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 72 bp GCTTCCTCTTCCTTACCCAAGGAAAGCAACACTCCCTaGCTCAGCAAGCTGCCACTGTGTCCTCAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: ASSSLPKESNTP*LSKLPLCPQVC
Trigger: ACAGACCTGAGGACACAGTGGCAGCTTGCTGAGCAAGGGAGTGTTGCTTTCCTTGGGTAAGGAAGAGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCACAGCAAAGAAGTCCCTaGGACAGGGATGCCGACAGC +
Preference number: 4 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPQQRSP*DRDADS
Trigger: GCTGTCGGCATCCCTGTCTCAGGGACTTCTTTGCTG...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp CTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATACCAGCCCCTGTAGGGGCAGCTaGGCTGACAACTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: LKLVTGIYCGVLMPAHTSPCRGS*ADNSSS
Trigger: GGATGAGGAGTTGTCAGCTCAGCTGCCCCTACAGGG...GCTGGTATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGAGAGTCCGCTCAATGTaGCGGTGCTGGTCCACACAG +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKRVRSM*RCWSTQ
Trigger: CTGTGTGGACCAGCACCGTCACATTGAGCGGACTCT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GGTGAAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAATCCTCCATTGCCCCTTaGATCTCCAAGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GEIALSQGTWTEVLLGCQSSIAP*ISKSCS
Trigger: GGAGCAGCTCTTGGAGATTCAAGGGGCAATGGAGGA...TTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp CCGCTGCGACCACTATCAAAAACATTGAGGAGCCAATTGAGGCTCATGTCCACAGTTTCCATCGGACGTTaGTCTGTTCCAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLRPLSKTLRSQLRLMSTVSIGR*SVPGPG
Trigger: CCCAGGCCCTGGAACAGATCAACGTCCGATGGAAAC...TGTGGACATGAGCCTCAATTGGCTCCTCAATGTTTTTGATAGTGGTCGCAGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGTTTCCATCGGACGTTaGTCTGTTCCAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWVSIGR*SVPGPG
Trigger: CCCAGGCCCTGGAACAGATCAACGTCCGATGGAAAC...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTTCACTTGCTCAGCAATGGTGACCCGATGCAGAACAGCCAGCCACACCATGGACAGTCAGGCAGTGAATaGCCTCTACCACATCCATCA +
Preference number: 4 (lower is better)
Translates to: LHLLSNGDPMQNSQPHHGQSGSE*PLPHPS
Trigger: TGATGGATGTGGTAGAGGTCATTCACTGCCTGACTG...TCCATGGTGTGGCTGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp CTGTGGTTAAAGTTACCAGGTCCAAGCGCAGGGCTTTCTGGACTCTGCGGAGTTAAGGCAGTCAGGCAGTaGATGACCTCTACCACATCC +
Preference number: 4 (lower is better)
Translates to: LWLKLPGPSAGLSGLCGVKAVRQ*MTSTTS
Trigger: GGATGTGGTAGAGGTCATTCACTGCCTGACTGCCTT...AACTCCGCAGAGTCCAGAAAGCCCTGCGCTTGGACCTGGTAACTTTAACCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGAAGGCAGTCAGGCAGTaGATGACCTCTACCACATCC +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRKAVRQ*MTSTTS
Trigger: GGATGTGGTAGAGGTCATTCACTGCCTGACTGCCTT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCACAGAGTGGCACGTTaGCCAGGATGCCTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAHRVAR*PGCLFP
Trigger: AGGAAAGAGGCATCCTGGTCAACGTGCCACTCTGTG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTTGCTCAGCAATGGTaGCCCGATGCAGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFLAQQW*PDAEQP
Trigger: TGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCGGCAGATGTCAACGTTaGATTGCTTCAGACTCCGGT +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAGRCQR*IASDSG
Trigger: ACCGGAGTCTGAAGCAATTCAACGTTGACATCTGCC...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCGCTGAGGGTGTTTGCTaGAATAATGCTTGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAAEGVC*NNAWSG
Trigger: TCCGCTCCAAGCATTATTTCAGCAAACACCCTCAGC...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTAGAGCCACTGCCATCTaGTTCGGTGGGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFRATAI*FGGWLQ
Trigger: CTGCAGCCACCCACCGAATCAGATGGCAGTGGCTCT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTGACGGAGTTTCTCCATaGTGTCCTCCAAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFDGVSP*CPPSTG
Trigger: GCCTGTGCTTGGAGGACATCATGGAGAAACTCCGTC...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGCTGAGGAAAGGCTTTaGCCGGAACCAGGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWAEERL*PEPGED
Trigger: GTCCTCTCCTGGTTCCGGTCAAAGCCTTTCCTCAGC...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGGCTGAGGAAAGGCTTTaGCCGGAACCAGGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKAEERL*PEPGED
Trigger: GTCCTCTCCTGGTTCCGGTCAAAGCCTTTCCTCAGC...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCTGTTGCTTTGGTCTTaGGGACAGCCCACCCCAAAC +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGLLLWS*GQPTPN
Trigger: GTTTGGGGTGGGCTGTCCTCAAGACCAAAGCAACAG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTACCGTCACTCCCTCCTaGTTGTGGTGGCAACTGTTG +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFTVTPS*LWWQLL
Trigger: CAACAGTTGCCACCACAATCAGGAGGGAGTGACGGT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTGATGCCCAGGTTCTATaGTTGATGCCCGCCTACCAC +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFDAQVL*LMPAYH
Trigger: GTGGTAGGCGGGCATCAATCATAGAACCTGGGCATC...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCACCACAAAATGTCAGTaGCCCCTTAGTGAGAATTCA +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAATTKCQ*PLSENS
Trigger: TGAATTCTCACTAAGGGGTCACTGACATTTTGTGGT...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACGGGAACCACCCAGCTaGAGAATTAAGTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGREPPS*RIKSPQ
Trigger: CTGTGGAGACTTAATTCTTCAGCTGGGTGGTTCCCG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTATGGACTCTGCGAGCTaGGCCCTGGCCTTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFMDSAS*ALALSL
Trigger: AAGGCTCAAGGCCAGGGCTCAGCTCGCAGAGTCCAT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTGGGAAAGCACCACAGTaGGTGGCAATCAAAGTTAAC +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLGKAPQ*VAIKVN
Trigger: GTTAACTTTGATTGCCACTCACTGTGGTGCTTTCCC...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGATGGAACTGGTCAGCTaGCTGCCAGTCATGACATCG +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRMELVS*LPVMTS
Trigger: CGATGTCATGACTGGCAGGCAGCTGACCAGTTCCAT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR GCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATGCTTCGGAGGCTGCTaGTATGATGGAACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGCFGGC*YDGTGQ
Trigger: CTGACCAGTTCCATCATAGCAGCAGCCTCCGAAGCA...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGACCATCTTGAGGAGGTaGAGGGCTGGTGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKTILRR*RAGDSS
Trigger: GCTGCTGTCACCAGCCCTGCACCTCCTCAAGATGGT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTCTGGCCTGCAGATCATaGTCATTGAAGATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLLACRS*SLKISR
Trigger: CCTGGAAATCTTCAATGAGCATGATCTGCAGGCCAG...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTTCACTTGCTCAGCAATGGTGACCCGATGCAGAACAGCCAGCCACACCATGGAACGTGCTCACTGGCCTaGAGATCATGCTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: LHLLSNGDPMQNSQPHHGTCSLA*RSCSLK
Trigger: CTTCAATGAGCATGATCTGCAGGCCAGTGAGCACGT...TCCATGGTGTGGCTGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCCACATTGCTaGCCCCAAAGGCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKWAPHC*PQRLPL
Trigger: AAGTGGCAGCCTTTGGGGGCAGCAATGTGGAGCCCA...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTTGCCTTTGCTGGCCCTaGCTGTCAAGAAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFCLCWP*LSRSRS
Trigger: AGACCTGCTTCTTGACAGGCAGGGCCAGCAAAGGCA...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGACACTGCATGGAGCCTaGTGTCCAAAGGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWTLHGA*CPKAGS
Trigger: GGAGCCAGCCTTTGGACAGCAGGCTCCATGCAGTGT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTTCAGCTGCCTCCTCATaGTGCCACTTCAGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFSAASS*CHFRRL
Trigger: GAGGCGCCTGAAGTGGCAGCATGAGGAGGCAGCTGA...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCCAGAAGCTCCTCATTaGGGTGGTCTGTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGPEAPH*GGLLLP
Trigger: AGGCAGCAACAGACCACCGCAATGAGGAGCTTCTGG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCCATCACTGCCCGCATaGACCTCACATACCACCAGA +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGPSLPA*TSHTTR
Trigger: TCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCCTTGCTCAGCAAGCTaGCACTGTGTCCTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGPCSAS*HCVLRS
Trigger: AGACCTGAGGACACAGTGGCAGCTTGCTGAGCAAGG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAAAGCAACACTCCCTTaGTCAGCAAGCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAKATLP*SASCHC
Trigger: ACAGTGGCAGCTTGCTGAGCAAGGGAGTGTTGCTTT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTGGCAGAGCTTGGGTTTaGTCTATTTTGGCACCTGAA +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLGRAWV*SILAPE
Trigger: TTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGCC...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTCCATGCCTGGCCCACTaGAGTTGCCACAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSPCLAH*SCHRPS
Trigger: TGAGGGCCTGTGGCAACTGCAGTGGGCCAGGCATGG...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGATTCCCCACACATACTaGAGTGACTGTCCCTGGACC +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRIPHTY*SDCPWT
Trigger: GGTCCAGGGACAGTCACTGCAGTATGTGTGGGGAAT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTCCCCTAGACTTCCATaGCACCCTTGTCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKSPRLP*HPCHLP
Trigger: GGGGAGGTGACAAGGGTGGCATGGAAGTCTAGGGGA...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCCAGTCATGACATCGTaGGAGGGTGTAAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFPVMTS*EGVRAS
Trigger: GGATGCCCTTACACCCTCCCACGATGTCATGACTGG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR CCA 90 bp CCCCTTGATGGGGCACTGCCTACAGATAGAGCACTTGGTCTGATGCTTCACTTGACACAGATTCATGGCTaGTGGTTCCAGGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PLDGALPTDRALGLMLHLTQIHG*WFQGSR
Trigger: TCTGGACCCCTGGAACCACCAGCCATGAATCTGTGT...CAAGTGAAGCATCAGACCAAGTGCTCTATCTGTAGGCAGTGCCCCATCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp CCCCTTGATGGGGCACTGCCTACAGATAGAGCACTTGGTCTGATGCTTCACTTGCGGACTCCCTCAGCTTaGCTCAGAGTAGTGCTTAGT +
Preference number: 4 (lower is better)
Translates to: PLDGALPTDRALGLMLHLRTPSA*LRVVLS
Trigger: ACTAAGCACTACTCTGAGCCAAGCTGAGGGAGTCCG...CAAGTGAAGCATCAGACCAAGTGCTCTATCTGTAGGCAGTGCCCCATCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCGGACTCCCTCAGCTTaGCTCAGAGTAGTGCTTAGT +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRRTPSA*LRVVLS
Trigger: ACTAAGCACTACTCTGAGCCAAGCTGAGGGAGTCCG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAAGGTACAATGGGCTCCCAAGTaGCTCGGACTCCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: KLLFPREPGQRCFSDVKVQWAPK*LGLPQL
Trigger: AAGCTGAGGGAGTCCGAGCCACTTGGGAGCCCATTG...TACCTTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGCAATGGGCTCCCAAGTaGCTCGGACTCCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWQWAPK*LGLPQL
Trigger: AAGCTGAGGGAGTCCGAGCCACTTGGGAGCCCATTG...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTTCAGAAATGGCAAGTTaGTGGGCCAGATCATTCACC +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLSEMAS*WARSFT
Trigger: GGTGAATGATCTGGCCCACCAACTTGCCATTTCTGA...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAAGGTATCCCGGTGGGCATCCTaGAGCTGCTTAAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: KLLFPREPGQRCFSDVKVSRWAS*SCLSLS
Trigger: TGAGAGGCTTAAGCAGCTCCAGGATGCCCACCGGGA...TACCTTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTCCCGGTGGGCATCCTaGAGCTGCTTAAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKSRWAS*SCLSLS
Trigger: TGAGAGGCTTAAGCAGCTCCAGGATGCCCACCGGGA...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCAGATGTCAAGGTATACTaGGCTCCCACCAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPDVKVY*APTRAP
Trigger: TGGGGCCCTGGTGGGAGCCCAGTATACCTTGACATC...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGAGCAGGACACCAAGGTaGCGCTGGTCACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKSRTPR*RWSHWL
Trigger: CAGCCAGTGTGACCAGCGCCACCTTGGTGTCCTGCT...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCGGATGCTTCAATGACTaGCTTCCCGGTGCTAAAACG +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAGCFND*LPGAKT
Trigger: CGTTTTAGCACCGGGAAGCCAGTCATTGAAGCATCC...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGACCCACTCCAGGAACTaGGATGCTTCAATGACTGGC +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRTHSRN*DASMTG
Trigger: GCCAGTCATTGAAGCATCCCAGTTCCTGGAGTGGGT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTGTGTGTGTCGGCGTGTaGCCACATCGGGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFVCVGV*PHRGRS
Trigger: GCTTCTTCCCCGATGTGGCCACACGCCGACACACAC...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCGCCTCAGCTCTCCCTaGAGAATCCGGTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFRLSSP*RIRFSS
Trigger: AGATGAGAACCGGATTCTCCAGGGAGAGCTGAGGCG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTAGCCGTCAGCCAGACTaGGTGCCTCAGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSSRQPD*VPQLPP
Trigger: AGGAGGCAGCTGAGGCACCCAGTCTGGCTGACGGCT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAGCTCCTCATTGCGGTaGTCTGTTGCTGCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGSSSLR*SVAASV
Trigger: CACTGAGGCAGCAACAGACCACCGCAATGAGGAGCT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTGCAGCCTCGGTATCTaGAGTAGTCTGTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRCSLGI*SSLSLL
Trigger: GAGAAGGGACAGACTACTCCAGATACCGAGGCTGCA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAGAAGGGTCACAGCCTaGAAGGGTGTTGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGRRVTA*KGVGWQ
Trigger: CTGCCATCCAACACCCTTCCAGGCTGTGACCCTTCT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGCTGATTTGTGGCCTGTaGCTCCTATGGAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWLICGL*LLWRGH
Trigger: GTGGCCCCTCCATAGGAGCCACAGGCCACAAATCAG...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCAGAAAGCTGCCTAAGTaGGCTCTGAATCTATTCAAC +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAARKLPK*ALNLFN
Trigger: GTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCT...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTTGTCCTTTTCTGCATaGGGTGGGCAGAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRLSFSA*GGQSLG
Trigger: ACCCAAGCTCTGCCCACCCCATGCAGAAAAGGACAA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCCAAGAGCTCTCAGGTaGGGTGGGGATAACAGAAAA +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAPRALR*GGDNRK
Trigger: TTTTCTGTTATCCCCACCCCACCTGAGAGCTCTTGG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCTTTTCTACCATGCCTaGCCCACTGCAGTTGCCACA +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRLFYHA*PTAVAT
Trigger: TGTGGCAACTGCAGTGGGCCAGGCATGGTAGAAAAG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCAATCCAACCCCAAGTTaGATTCATAGTACCCAAGGA +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAANPTPS*IHSTQG
Trigger: TCCTTGGGTACTATGAATCCAACTTGGGGTTGGATT...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACCACTCTGCTGTCACTaGAAGCAGAGGTATCCTCGT +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGPLCCH*KQRYPR
Trigger: ACGAGGATACCTCTGCTTCCAGTGACAGCAGAGTGG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTTGCCAACCCATTTCCTaGAGCACCAGAAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLCQPIS*STRNSN
Trigger: GTTTGAGTTTCTGGTGCTCCAGGAAATGGGTTGGCA...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAACTGTGGGAGAAGATaGACTCTGCGAGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGNCGRR*TLRAEP
Trigger: GGGCTCAGCTCGCAGAGTCCATCTTCTCCCACAGTT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 72 bp CTGCCTACAGATAGAGCACTTGGTCTGATGCTTCACTaGCTCAGCAATGGTGACCCGATGCAGAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPTDRALGLMLH*LSNGDPMQNSQ
Trigger: CTGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAGTGAAGCATCAGACCAAGTGCTCTATCTGTAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
3UTR CAA 72 bp GGAAGGGTGTTGGATGGCAGTCATACTACTCCAGACTaGAGGTGGGCTTCCTCTTCCTTACCCAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: GRVLDGSHTTPD*RWASSSLPKES
Trigger: GCTTTCCTTGGGTAAGGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTATGACTGCCATCCAACACCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTCCCTGTAGGGGCAGCTaGGCTGACAACTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSPCRGS*ADNSSS
Trigger: GGATGAGGAGTTGTCAGCTCAGCTGCCCCTACAGGG...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTCCTCCATTGCCCCTTaGATCTCCAAGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKSSIAP*ISKSCS
Trigger: GGAGCAGCTCTTGGAGATTCAAGGGGCAATGGAGGA...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTGTGGTTAAAGTTACCAGGTCCAAGCGCAGGGCTTTCTGGACTCTGCGGAGTTCTGGGAGTGAATCAATaGAGAGATCCCCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: LWLKLPGPSAGLSGLCGVLGVNQ*RDPQWA
Trigger: AGCCCATTGGGGATCTCTTCATTGATTCACTCCCAG...AACTCCGCAGAGTCCAGAAAGCCCTGCGCTTGGACCTGGTAACTTTAACCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTGTTTCCATCGGACGTTaGTCTGTTCCAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFVSIGR*SVPGPG
Trigger: CCCAGGCCCTGGAACAGATCAACGTCCGATGGAAAC...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCGGGAACTTTATTGGGTaGAATTGCTCTTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAGNFIG*NCSFPG
Trigger: CCCTGGGAAAGAGCAATTTCACCCAATAAAGTTCCC...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAGCAGATCATGCTCATTaGAGATTTCCAGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGADHAH*RFPGLW
Trigger: CCACAGCCCTGGAAATCTTCAATGAGCATGATCTGC...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACAGTCAGGCAGTGAATaGCCTCTACCACATCCATCA +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGQSGSE*PLPHPS
Trigger: TGATGGATGTGGTAGAGGTCATTCACTGCCTGACTG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTAAGGCAGTCAGGCAGTaGATGACCTCTACCACATCC +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFKAVRQ*MTSTTS
Trigger: GGATGTGGTAGAGGTCATTCACTGCCTGACTGCCTT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTAGTTGGCCACTTGGCTaGAGAGGTACTGAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLSWPLG*RGTEVF
Trigger: AAAAACTTCAGTACCTCTTCAGCCAAGTGGCCAACT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCACTTGCTCAGCAATGGTaGCCCGATGCAGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPLAQQW*PDAEQP
Trigger: TGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAG...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGCTTGCTCAGCAATGGTaGCCCGATGCAGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWLAQQW*PDAEQP
Trigger: TGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAG...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGCTTGCTCAGCAATGGTaGCCCGATGCAGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKLAQQW*PDAEQP
Trigger: TGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAG...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGGTCAGCCTCCAGCACTaGTTGCACAGGCAGATAACC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKVSLQH*LHRQIT
Trigger: GGTTATCTGCCTGTGCAATCAGTGCTGGAGGCTGAC...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGGACATCCTGGCTCTTTaGCCCCACATCATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKDILAL*PHIICS
Trigger: GCTGCAGATGATGTGGGGTCAAAGAGCCAGGATGTC...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTAAGTGGCCAGCTTCCTaGTTTGTGGCCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFKWPAS*FVACGS
Trigger: GGAGCCACAGGCCACAAATCAGGAAGCTGGCCACTT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTAGAGCTAGTTCAGTTTaGGGATTGGATTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLRASSV*GLDSPS
Trigger: GGAAGGTGAATCCAATCCTCAAACTGAACTAGCTCT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTTTAGAATTTAATGTGTaGGTGAGGCCAGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLLEFNV*VRPGEH
Trigger: GTGCTCTCCTGGCCTCACTCACACATTAAATTCTAA...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGCTGTTGCTTTGGTCTTaGGGACAGCCCACCCCAAAC +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWLLLWS*GQPTPN
Trigger: GTTTGGGGTGGGCTGTCCTCAAGACCAAAGCAACAG...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGACCGTCACTCCCTCCTaGTTGTGGTGGCAACTGTTG +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKTVTPS*LWWQLL
Trigger: CAACAGTTGCCACCACAATCAGGAGGGAGTGACGGT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTGCAGATGTTATGCTGTaGAGTCTGACACCCTGGACC +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFADVML*SLTPWT
Trigger: GGTCCAGGGTGTCAGACTTCACAGCATAACATCTGC...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTCCCAGGTTCTATGATTaGTGCCCGCCTACCACCTGC +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFPRFYD*CPPTTC
Trigger: GCAGGTGGTAGGCGGGCATCAATCATAGAACCTGGG...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGATGCCCAGGTTCTATaGTTGATGCCCGCCTACCAC +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWDAQVL*LMPAYH
Trigger: GTGGTAGGCGGGCATCAATCATAGAACCTGGGCATC...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGGATGCCCAGGTTCTATaGTTGATGCCCGCCTACCAC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKDAQVL*LMPAYH
Trigger: GTGGTAGGCGGGCATCAATCATAGAACCTGGGCATC...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAATATGCTCCCACTCTaGCTGATGCCCAGGTTCTAT +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPANMLPL*LMPRFY
Trigger: ATAGAACCTGGGCATCAGTCAGAGTGGGAGCATATT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCTGGGATTTTTGGCCTTaGAATGGTGCCACAGACCAT +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAWDFWP*NGATDH
Trigger: ATGGTCTGTGGCACCATTTCAAGGCCAAAAATCCCA...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTATGGACTCTGCGAGCTaGGCCCTGGCCTTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSMDSAS*ALALSL
Trigger: AAGGCTCAAGGCCAGGGCTCAGCTCGCAGAGTCCAT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCGGGAAAGCACCACAGTaGGTGGCAATCAAAGTTAAC +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAGKAPQ*VAIKVN
Trigger: GTTAACTTTGATTGCCACTCACTGTGGTGCTTTCCC...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGAGGGATGCCGACAGCTaGTGTATGCACACTCTCCCT +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKRDADS*CMHTLP
Trigger: AGGGAGAGTGTGCATACAGCAGCTGTCGGCATCCCT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000541709.5
CDS-3UTR GCA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCATCCCTGAGACAGGGATaGCGACAGCTGCTGTATGCA +
Preference number: 4 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPSLRQG*RQLLYA
Trigger: TGCATACAGCAGCTGTCGGCATCCCTGTCTCAGGGA...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTCCCTGAGACAGGGATaGCGACAGCTGCTGTATGCA +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKSLRQG*RQLLYA
Trigger: TGCATACAGCAGCTGTCGGCATCCCTGTCTCAGGGA...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000541709.5
CDS-3UTR GCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTATGGAACTGGTCAGCTaGCTGCCAGTCATGACATCG +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAMELVS*LPVMTS
Trigger: CGATGTCATGACTGGCAGGCAGCTGACCAGTTCCAT...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR GCA 90 bp CTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATACCAGCACCATCTTGAGGAGGTaGAGGGCTGGTGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: LKLVTGIYCGVLMPAHTSTILRR*RAGDSS
Trigger: GCTGCTGTCACCAGCCCTGCACCTCCTCAAGATGGT...GCTGGTATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp CTTCACTTGCTCAGCAATGGTGACCCGATGCAGAACAGCCAGCCACACCATGGACTGGCCTGCAGATCATaGTCATTGAAGATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LHLLSNGDPMQNSQPHHGLACRS*SLKISR
Trigger: CCTGGAAATCTTCAATGAGCATGATCTGCAGGCCAG...TCCATGGTGTGGCTGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGACGTGCTCACTGGCCTaGAGATCATGCTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRTCSLA*RSCSLK
Trigger: CTTCAATGAGCATGATCTGCAGGCCAGTGAGCACGT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp ACCAGGGCCCCAGGGGATAACAATAGACTCTCCAGGAAGATGGCTGAGGTTCTGCCCGCATCTTTCCGCTaGGACCACTATCAAAAACAT +
Preference number: 4 (lower is better)
Translates to: TRAPGDNNRLSRKMAEVLPASFR*DHYQKH
Trigger: ATGTTTTTGATAGTGGTCGCAGCGGAAAGATGCGGG...CAGAACCTCAGCCATCTTCCTGGAGAGTCTATTGTTATCCCCTGGGGCCCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCTTTCCTTCACTTCCGTaGCACACAAGCATGCAATGC +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAFPSLP*HTSMQC
Trigger: GCATTGCATGCTTGTGTGGCACGGAAGTGAAGGAAA...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTTGGGCTCCACATTGCTaGCCCCAAAGGCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFWAPHC*PQRLPL
Trigger: AAGTGGCAGCCTTTGGGGGCAGCAATGTGGAGCCCA...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GGTGAAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAACCCTTGATGGGGCACTaGCTACAGATAGAGCACTTG +
Preference number: 4 (lower is better)
Translates to: GEIALSQGTWTEVLLGCQPLMGH*LQIEHL
Trigger: CAAGTGCTCTATCTGTAGGCAGTGCCCCATCAAGGG...TTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCCCTTGATGGGGCACTaGCTACAGATAGAGCACTTG +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAPLMGH*LQIEHL
Trigger: CAAGTGCTCTATCTGTAGGCAGTGCCCCATCAAGGG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTACTGGTCCTCGTCTATaGTGTCATCTGGGGACAAGC +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYATGPRL*CHLGTS
Trigger: GCTTGTCCCCAGATGACAGCATAGACGAGGACCAGT...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTACTGGTCCTCGTCTATaGTGTCATCTGGGGACAAGC +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFTGPRL*CHLGTS
Trigger: GCTTGTCCCCAGATGACAGCATAGACGAGGACCAGT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCGTGATGGGGCTGGAGTaGCGCAGCAGGTACTGGTCC +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSVMGLE*RSRYWS
Trigger: GGACCAGTACCTGCTGCGGCACTCCAGCCCCATCAC...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATGCTGCCTCCTCATGCTaGCACTTCAGGCGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDAASSC*HFRRLS
Trigger: GCTGAGGCGCCTGAAGTGGCAGCATGAGGAGGCAGC...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTCAGCTGCCTCCTCATaGTGCCACTTCAGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSSAASS*CHFRRL
Trigger: GAGGCGCCTGAAGTGGCAGCATGAGGAGGCAGCTGA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGATTGCGGTGGTCTGTTaGTGCCTCAGTGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKIAVVC*CLSGAV
Trigger: GACGGCTCCACTGAGGCAGCAACAGACCACCGCAAT...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGCCAGAAGCTCCTCATTaGGGTGGTCTGTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKPEAPH*GGLLLP
Trigger: AGGCAGCAACAGACCACCGCAATGAGGAGCTTCTGG...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGAGGCGGCTCTTATGTTaGCGAAGGATACGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKRRLLC*RRIRAS
Trigger: CGAGGCCCGTATCCTTCGGCAACATAAGAGCCGCCT...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTAGGCGGCTCTTATGTTaGCGAAGGATACGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFRRLLC*RRIRAS
Trigger: CGAGGCCCGTATCCTTCGGCAACATAAGAGCCGCCT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTCTCCCGGGGGTGACTaGCTTCTGACTGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSSPGGD*LLTAVE
Trigger: CTCCACAGCAGTCAGAAGGCAGTCACCCCCGGGAGA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGATACCACCAGATCCCTaGTGCTGCCCAGAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKIPPDP*CCPEPK
Trigger: TTTGGGCTCTGGGCAGCAGCAGGGATCTGGTGGTAT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACTGTTTGTCCTTTTCTaGATGGGGTGGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGLFVLF*MGWAEL
Trigger: AAGCTCTGCCCACCCCATGCAGAAAAGGACAAACAG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTGCCCGCCTACCACCTaGTCAACCATCTATCCAGAT +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGCPPTT*STIYPD
Trigger: ATCTGGATAGATGGTTGAGCAGGTGGTAGGCGGGCA...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTTGCCCGCCTACCACCTaGTCAACCATCTATCCAGAT +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYACPPTT*STIYPD
Trigger: ATCTGGATAGATGGTTGAGCAGGTGGTAGGCGGGCA...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCTGGCCCACTGCAGTTaGCACAGGCCCTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSLAHCS*HRPSAA
Trigger: GGCTGCTGAGGGCCTGTGGCAACTGCAGTGGGCCAG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACTGGCCCACTGCAGTTaGCACAGGCCCTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPLAHCS*HRPSAA
Trigger: GGCTGCTGAGGGCCTGTGGCAACTGCAGTGGGCCAG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAACATCTTTTCTACCATaGCTGGCCCACTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGTSFLP*LAHCSC
Trigger: GCAACTGCAGTGGGCCAGGCATGGTAGAAAAGATGT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTATTCAACTCTTGACCTaGTGCTTCAGTCCACCTACA +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLIQLLT*CFSPPT
Trigger: TGTAGGTGGACTGAAGCAGCAGGTCAAGAGTTGAAT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGTCCCCTAGACTTCCATaGCACCCTTGTCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKSPRLP*HPCHLP
Trigger: GGGGAGGTGACAAGGGTGGCATGGAAGTCTAGGGGA...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACTGGGAGGCCGGGGCTaGGCTGCCTCTGTGAATCAG +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTLGGRG*AASVNQ
Trigger: CTGATTCACAGAGGCAGCCCAGCCCCGGCCTCCCAG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGACACAGATTCATGGCTaGTGGTTCCAGGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGTQIHG*WFQGSR
Trigger: TCTGGACCCCTGGAACCACCAGCCATGAATCTGTGT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCGGACTCCCTCAGCTTaGCTCAGAGTAGTGCTTAGT +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFRTPSA*LRVVLS
Trigger: ACTAAGCACTACTCTGAGCCAAGCTGAGGGAGTCCG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTAACAGCTTAATAGCCTaGATGTGCTCTGGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLNSLIA*MCSGSE
Trigger: TTCACTCCCAGAGCACATCCAGGCTATTAAGCTGTT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGTCCCGGTGGGCATCCTaGAGCTGCTTAAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKSRWAS*SCLSLS
Trigger: TGAGAGGCTTAAGCAGCTCCAGGATGCCCACCGGGA...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAAGGTACTTTCCCAGGGAACCTaGACAGAGGTGCTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: KLLFPREPGQRCFSDVKVLSQGT*TEVLLG
Trigger: TCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAG...TACCTTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAAGCGCAGGGCTTTCTaGACTCTGCGGAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGKRRAF*TLRSFM
Trigger: CATGAAACTCCGCAGAGTCCAGAAAGCCCTGCGCTT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCCATCACGTGCTCACTaGCCTGCAGATCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFPSRAH*PADHAH
Trigger: ATGAGCATGATCTGCAGGCCAGTGAGCACGTGATGG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTGGCGCTGGTCACACTaGCTGCCTGAGTTGGCCACT +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSWRWSH*LPELAT
Trigger: AGTGGCCAACTCAGGCAGCCAGTGTGACCAGCGCCA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATACCAGCGACGGGGCACCTGAATaGCCTCATGAAGCAGGACAC +
Preference number: 4 (lower is better)
Translates to: LKLVTGIYCGVLMPAHTSDGAPE*PHEAGH
Trigger: GTGTCCTGCTTCATGAGGCCATTCAGGTGCCCCGTC...GCTGGTATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTACCCACTCCAGGAACTaGGATGCTTCAATGACTGGC +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYATHSRN*DASMTG
Trigger: GCCAGTCATTGAAGCATCCCAGTTCCTGGAGTGGGT...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACTGGGAGGCCGGGGCTaGGCTGCCTCTCAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPLGGRG*AASQAK
Trigger: TTTTGCCTGAGAGGCAGCCCAGCCCCGGCCTCCCAG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402866.5
CDS-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATCTCAGCAAGCCTGCTaGCAAAATGCTCAATTCGGG +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGSQQAC*QNAQFG
Trigger: CCCGAATTGAGCATTTTGCCAGCAGGCTTGCTGAGA...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGCGCCTCAGCTCTCCCTaGAGAATCCGGTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKRLSSP*RIRFSS
Trigger: AGATGAGAACCGGATTCTCCAGGGAGAGCTGAGGCG...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGTGCCATCTGATTCGGTaGGTGGCTGCAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWCHLIR*VAAGEA
Trigger: AGCTTCTCCTGCAGCCACCCACCGAATCAGATGGCA...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTGCAGCCTCGGTATCTaGAGTAGTCTGTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGCSLGI*SSLSLL
Trigger: GAGAAGGGACAGACTACTCCAGATACCGAGGCTGCA...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCACAGGCTGACATCCTaGCTCTTTGACCCCACATCA +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFHRLTS*LFDPTS
Trigger: TGATGTGGGGTCAAAGAGCCAGGATGTCAGCCTGTG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTATAGGATGGGGATCTaGCTCCATCAAGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGYRMGI*LHQEAS
Trigger: GCTGGCCTCTTGATGGAGCCAGATCCCCATCCTATA...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTTATAGGATGGGGATCTaGCTCCATCAAGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFYRMGI*LHQEAS
Trigger: GCTGGCCTCTTGATGGAGCCAGATCCCCATCCTATA...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCATTCATAATGCTGGATaGAACCTTGGGGTAATTAGG +
Preference number: 4 (lower is better)
Translates to: SPITARMHLTYHQIPAAAIHNAG*NLGVIR
Trigger: CCTAATTACCCCAAGGTTCCATCCAGCATTATGAAT...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGAGAAGGGTCACAGCCTaGAAGGGTGTTGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWRRVTA*KGVGWQ
Trigger: CTGCCATCCAACACCCTTCCAGGCTGTGACCCTTCT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCTGCCTTATGATTAGCTaGGGACAATCAGCCACCTCA +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPACLMIS*GQSATS
Trigger: TGAGGTGGCTGATTGTCCCCAGCTAATCATAAGGCA...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGCTGATTTGTGGCCTGTaGCTCCTATGGAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKLICGL*LLWRGH
Trigger: GTGGCCCCTCCATAGGAGCCACAGGCCACAAATCAG...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCAGCTTCCTGATTTGTaGCCTGTGGCTCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFQLPDL*PVAPME
Trigger: CTCCATAGGAGCCACAGGCCACAAATCAGGAAGCTG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCTGTTGTTGTCTGGGTaGAAAGTGGCCAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYALLLSG*KVASFL
Trigger: CAGGAAGCTGGCCACTTTCCACCCAGACAACAACAG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTGGGTTTGCTCTATTTTaGCACCTGAACCATTTAGGG +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLGFALF*HLNHLG
Trigger: CCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCC...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTGGGGTGGGCAGAGCTTaGGTTTGCTCTATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAGVGRA*VCSILA
Trigger: TGCCAAAATAGAGCAAACCCAAGCTCTGCCCACCCC...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACCACTGGCCCACTGCTaGATTATAATACAACACCCC +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGPLAHC*IIIQHP
Trigger: GGGGTGTTGTATTATAATCCAGCAGTGGGCCAGTGG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCCAAGAGCTCTCAGGTaGGGTGGGGATAACAGAAAA +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRPRALR*GGDNRK
Trigger: TTTTCTGTTATCCCCACCCCACCTGAGAGCTCTTGG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCTAGCCTTTCTAATCTaGAGGGAAGGGCACATGTCC +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRLAFLI*REGHMS
Trigger: GGACATGTGCCCTTCCCTCCAGATTAGAAAGGCTAG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGAACTGTGGGAGAAGATaGACTCTGCGAGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKNCGRR*TLRAEP
Trigger: GGGCTCAGCTCGCAGAGTCCATCTTCTCCCACAGTT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGCCCCCTCTCAAATGTaGCAACTGTGGGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGAPSQM*QLWEKM
Trigger: CATCTTCTCCCACAGTTGCCACATTTGAGAGGGGGC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCCCCTGTAGGGGCAGCTaGGCTGACAACTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSPCRGS*ADNSSS
Trigger: GGATGAGGAGTTGTCAGCTCAGCTGCCCCTACAGGG...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTTCCATACAAAGCGGCTaGGATTCTGGATCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFSIQSG*DSGSAV
Trigger: AACAGCGGATCCAGAATCTCAGCCGCTTTGTATGGA...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCTGGGAGTGAATCAATaGAGAGATCCCCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYALGVNQ*RDPQWA
Trigger: AGCCCATTGGGGATCTCTTCATTGATTCACTCCCAG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GGTGAAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAAGATGTGCTCTGGGAGTaGATCAATGAAGAGATCCCC +
Preference number: 4 (lower is better)
Translates to: GEIALSQGTWTEVLLGCQDVLWE*INEEIP
Trigger: GGGGATCTCTTCATTGATTCACTCCCAGAGCACATC...TTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTGATGTGCTCTGGGAGTaGATCAATGAAGAGATCCCC +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYADVLWE*INEEIP
Trigger: GGGGATCTCTTCATTGATTCACTCCCAGAGCACATC...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGATGTGCTCTGGGAGTaGATCAATGAAGAGATCCCC +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGDVLWE*INEEIP
Trigger: GGGGATCTCTTCATTGATTCACTCCCAGAGCACATC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGGGGAACTTTATTGGGTaGAATTGCTCTTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRGNFIG*NCSFPG
Trigger: CCCTGGGAAAGAGCAATTTCACCCAATAAAGTTCCC...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGCAGATCATGCTCATTaGAGATTTCCAGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGADHAH*RFPGLW
Trigger: CCACAGCCCTGGAAATCTTCAATGAGCATGATCTGC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTGCAGATCATGCTCATTaGAGATTTCCAGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAADHAH*RFPGLW
Trigger: CCACAGCCCTGGAAATCTTCAATGAGCATGATCTGC...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCAGTCAGGCAGTGAATaGCCTCTACCACATCCATCA +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAQSGSE*PLPHPS
Trigger: TGATGGATGTGGTAGAGGTCATTCACTGCCTGACTG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTCACAGAGTGGCACGTTaGCCAGGATGCCTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFHRVAR*PGCLFP
Trigger: AGGAAAGAGGCATCCTGGTCAACGTGCCACTCTGTG...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTGTGGTTAAAGTTACCAGGTCCAAGCGCAGGGCTTTCTGGACTCTGCGGAGTTATAGAGCACTTGGTCTaGTGCTTCACTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LWLKLPGPSAGLSGLCGVIEHLV*CFTCSA
Trigger: TGCTGAGCAAGTGAAGCATCAGACCAAGTGCTCTAT...AACTCCGCAGAGTCCAGAAAGCCCTGCGCTTGGACCTGGTAACTTTAACCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTGACATCCTGGCTCTTTaGCCCCACATCATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFDILAL*PHIICS
Trigger: GCTGCAGATGATGTGGGGTCAAAGAGCCAGGATGTC...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTAATCTGTCCTGGAGCTaGAGTAATAGAACACACACT +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLNLSWS*SNRTHT
Trigger: AGTGTGTGTTCTATTACTTCAGCTCCAGGACAGATT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTATACTACTCCAGACTTaGGGTGGGCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFILLQT*GGLPLP
Trigger: AGGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTAT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGTCACCTGATTCAGCCTaGGAGCTAGAAGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWSPDSA*ELEGSQ
Trigger: CTGTGACCCTTCTAGCTCTCAGGCTGAATCAGGTGA...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTTCTTTAGCCCTGAGTaGGACCATAAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRFFSPE*DHKSWK
Trigger: CTTCCAGCTCTTATGGTCTCACTCAGGGCTAAAGAA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATGACACCCTGGACCTGTaGCTTAGTGGTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDDTLDL*LSGGGG
Trigger: GCCTCCTCCACCACTAAGTCACAGGTCCAGGGTGTC...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTTTATGCTGTGAAGTCTaGCACCCTGGACCTGTGACT +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFLCCEV*HPGPVT
Trigger: AGTCACAGGTCCAGGGTGTCAGACTTCACAGCATAA...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGGCAGATGTTATGCTGTaGAGTCTGACACCCTGGACC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKADVML*SLTPWT
Trigger: GGTCCAGGGTGTCAGACTTCACAGCATAACATCTGC...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCTAGTCAGCCTTCCGTaGCAATGCCCAATCAATGTG +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYALVSLP*QCPINV
Trigger: CACATTGATTGGGCATTGTCACGGAAGGCTGACTAG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGAAGCATAGCACAGCCTaGTGTCCTCCAGCTAGTCAG +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKKHSTA*CPPASQ
Trigger: CTGACTAGCTGGAGGACATCAGGCTGTGCTATGCTT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTGGGATTTTTGGCCTTaGAATGGTGCCACAGACCAT +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRWDFWP*NGATDH
Trigger: ATGGTCTGTGGCACCATTTCAAGGCCAAAAATCCCA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGCGGGAACCACCCAGCTaGAGAATTAAGTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWREPPS*RIKSPQ
Trigger: CTGTGGAGACTTAATTCTTCAGCTGGGTGGTTCCCG...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCAATGGAACTGGTCAGCTaGCTGCCAGTCATGACATCG +
Preference number: 4 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPMELVS*LPVMTS
Trigger: CGATGTCATGACTGGCAGGCAGCTGACCAGTTCCAT...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGCTTCGGAGGCTGCTaGTATGATGGAACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKCFGGC*YDGTGQ
Trigger: CTGACCAGTTCCATCATAGCAGCAGCCTCCGAAGCA...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR GCA 90 bp CCGCTGCGACCACTATCAAAAACATTGAGGAGCCAATTGAGGCTCATGTCCACAAGGTGCTTCGGAGGCTaGTGCTATGATGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: PLRPLSKTLRSQLRLMSTRCFGG*CYDGTG
Trigger: ACCAGTTCCATCATAGCAGCAGCCTCCGAAGCACCT...TGTGGACATGAGCCTCAATTGGCTCCTCAATGTTTTTGATAGTGGTCGCAGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTTCGGGGAGGTATCTTTaGTCTCAGAATGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYASGRYL*SQNEAP
Trigger: AGGAGCCTCATTCTGAGAGCAAAGATACCTCCCCGA...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTTTAATAGCCTGGATGTaGTCTGGGAGTGAATCAATG +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLLIAWM*SGSESM
Trigger: CATTGATTCACTCCCAGAGCACATCCAGGCTATTAA...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCAACCACATCCATCACGTaGTCACTGGCCTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPTTSIT*SLACRS
Trigger: TGATCTGCAGGCCAGTGAGCACGTGATGGATGTGGT...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGACCACATCCATCACGTaGTCACTGGCCTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKTTSIT*SLACRS
Trigger: TGATCTGCAGGCCAGTGAGCACGTGATGGATGTGGT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTTTCCTTCACTTCCGTaGCACACAAGCATGCAATGC +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRFPSLP*HTSMQC
Trigger: GCATTGCATGCTTGTGTGGCACGGAAGTGAAGGAAA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGTGCCTTTGCTGGCCCTaGCTGTCAAGAAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKCLCWP*LSRSRS
Trigger: AGACCTGCTTCTTGACAGGCAGGGCCAGCAAAGGCA...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTGGTAGTGCAGCTTATTaGCTTTGCTGGCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFGSAAY*LCWPCL
Trigger: CAGGCAGGGCCAGCAAAGGCAATAAGCTGCACTACC...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTAGCCTGCTGGCAAAATaGTCAATTCGGGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYASLLAK*SIRECV
Trigger: CACACACTCCCGAATTGAGCATTTTGCCAGCAGGCT...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGTGATGGGGCTGGAGTaGCGCAGCAGGTACTGGTCC +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTVMGLE*RSRYWS
Trigger: GGACCAGTACCTGCTGCGGCACTCCAGCCCCATCAC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAGCTGCCTCCTCATGCTaGCACTTCAGGCGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPAASSC*HFRRLS
Trigger: GCTGAGGCGCCTGAAGTGGCAGCATGAGGAGGCAGC...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATGTCAGCCAGACTGGGTaGCTCAGCTGCCTCCTCATG +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDVSQTG*LSCLLM
Trigger: CATGAGGAGGCAGCTGAGGCACCCAGTCTGGCTGAC...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCCTTCGAGGATCTGCATaGGCGTCTCCAGGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSLRGSA*ASPGGS
Trigger: AGAGCCGCCTGGAGACGCGCATGCAGATCCTCGAAG...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCAGCTCCCTCAGACGCTaGAGCTGGGACTCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSSSLRR*SWDSSC
Trigger: GCAGCTAGAGTCCCAGCTGCAGCGTCTGAGGGAGCT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATTCTCCCGGGGGTGACTaGCTTCTGACTGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDSPGGD*LLTAVE
Trigger: CTCCACAGCAGTCAGAAGGCAGTCACCCCCGGGAGA...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAGGCAGAGCTTGGGTTTaGTCTATTTTGGCACCTGAA +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGGRAWV*SILAPE
Trigger: TTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGCC...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACCCAAGCCACTGCCCTaGCTCCCCTGCAGCAGATCA +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPPKPLP*LPCSRS
Trigger: TGATCTGCTGCAGGGGAGGCAGGGCAGTGGCTTGGG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACCATGCCTGGCCCACTaGAGTTGCCACAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPPCLAH*SCHRPS
Trigger: TGAGGGCCTGTGGCAACTGCAGTGGGCCAGGCATGG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCAACTCTTGACCTGCTaGTTCAGTCCACCTACAACG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGQLLTC*FSPPTT
Trigger: CGTTGTAGGTGGACTGAAGCAGCAGGTCAAGAGTTG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCCCCTCTCAGAGCTaGTCTGTGTTGCTATGCAAT +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFLPSQS*SVLLCN
Trigger: ATTGCATAGCAACACAGAGCAGCTCTGAGAGGGGAG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395209.8
CDS-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTCAGATTCATGGCTGGTaGTTCCAGGGGTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSQIHGW*FQGSRG
Trigger: GCCTCTGGACCCCTGGAACCACCAGCCATGAATCTG...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGACACAGATTCATGGCTaGTGGTTCCAGGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWTQIHG*WFQGSR
Trigger: TCTGGACCCCTGGAACCACCAGCCATGAATCTGTGT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCTCTCCCACAGTTCACTaGCCACCGTCGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSSPTVH*PPSPAS
Trigger: GGAAGCAGGCGACGGTGGCCAGTGAACTGTGGGAGA...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAGAAATGGCAAGTTGGTaGGCCAGATCATTCACCAAC +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGEMASW*ARSFTN
Trigger: GTTGGTGAATGATCTGGCCCACCAACTTGCCATTTC...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTGTGGTTAAAGTTACCAGGTCCAAGCGCAGGGCTTTCTGGACTCTGCGGAGTTAGTGCACATCAGAAATaGCAAGTTGGTGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LWLKLPGPSAGLSGLCGVSAHQK*QVGGPD
Trigger: ATCTGGCCCACCAACTTGCCATTTCTGATGTGCACT...AACTCCGCAGAGTCCAGAAAGCCCTGCGCTTGGACCTGGTAACTTTAACCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAAGTGCACATCAGAAATaGCAAGTTGGTGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGSAHQK*QVGGPD
Trigger: ATCTGGCCCACCAACTTGCCATTTCTGATGTGCACT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGATCTGTTCCAGGGCCTaGGAATTCTCCATTGACAAG +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRICSRA*EFSIDK
Trigger: CTTGTCAATGGAGAATTCCCAGGCCCTGGAACAGAT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAAGGTAAAGCGCAGGGCTTTCTaGACTCTGCGGAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: KLLFPREPGQRCFSDVKVKRRAF*TLRSFM
Trigger: CATGAAACTCCGCAGAGTCCAGAAAGCCCTGCGCTT...TACCTTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp CCGCTGCGACCACTATCAAAAACATTGAGGAGCCAATTGAGGCTCATGTCCACACCATCACGTGCTCACTaGCCTGCAGATCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: PLRPLSKTLRSQLRLMSTPSRAH*PADHAH
Trigger: ATGAGCATGATCTGCAGGCCAGTGAGCACGTGATGG...TGTGGACATGAGCCTCAATTGGCTCCTCAATGTTTTTGATAGTGGTCGCAGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCACACCAAGGTGGCGCTaGTCACACTGGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSTPRWR*SHWLPE
Trigger: CTCAGGCAGCCAGTGTGACCAGCGCCACCTTGGTGT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCAGCAGGACACCAAGGTaGCGCTGGTCACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSSRTPR*RWSHWL
Trigger: CAGCCAGTGTGACCAGCGCCACCTTGGTGTCCTGCT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTGACGGGGCACCTGAATaGCCTCATGAAGCAGGACAC +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSDGAPE*PHEAGH
Trigger: GTGTCCTGCTTCATGAGGCCATTCAGGTGCCCCGTC...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GGTGAAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAAGGATGCTTCAATGACTaGCTTCCCGGTGCTAAAACG +
Preference number: 4 (lower is better)
Translates to: GEIALSQGTWTEVLLGCQGCFND*LPGAKT
Trigger: CGTTTTAGCACCGGGAAGCCAGTCATTGAAGCATCC...TTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATGTGTGTGTCGGCGTGTaGCCACATCGGGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDVCVGV*PHRGRS
Trigger: GCTTCTTCCCCGATGTGGCCACACGCCGACACACAC...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTGTCTATGCTGTCATCTaGGGACAAGCTGTCATTAAA +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLVYAVI*GQAVIK
Trigger: TTTAATGACAGCTTGTCCCCAGATGACAGCATAGAC...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCCTGCTGTCCAAAGGCTaGCTCCCGGTCTGTGATGGG +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSLLSKG*LPVCDG
Trigger: CCCATCACAGACCGGGAGCCAGCCTTTGGACAGCAG...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTTCTCATCTTCCAAGTaGGCCAGGATCTTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRFSSSK*ARIFCS
Trigger: GCTACAGAAGATCCTGGCCCACTTGGAAGATGAGAA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTAGCCGTCAGCCAGACTaGGTGCCTCAGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSSRQPD*VPQLPP
Trigger: AGGAGGCAGCTGAGGCACCCAGTCTGGCTGACGGCT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGCTCAGACGCTGCAGCTaGGACTCTAGCTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKLRRCS*DSSCLL
Trigger: CAACAAGCAGCTAGAGTCCCAGCTGCAGCGTCTGAG...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTCTCAGACGCTGCAGCTaGGACTCTAGCTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFLRRCS*DSSCLL
Trigger: CAACAAGCAGCTAGAGTCCCAGCTGCAGCGTCTGAG...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATGGAAGGGTGTTGGATaGCAGTCATACTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGWKGVG*QSYYSR
Trigger: TCTGGAGTAGTATGACTGCCATCCAACACCCTTCCA...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAGCCTGGAAGGGTGTTaGATGGCAGTCATACTACTC +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGSLEGC*MAVILL
Trigger: GAGTAGTATGACTGCCATCCAACACCCTTCCAGGCT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATGCCTTATGATTAGCTaGGGACAATCAGCCACCTCA +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGCLMIS*GQSATS
Trigger: TGAGGTGGCTGATTGTCCCCAGCTAATCATAAGGCA...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGGCCTGTGGCTCCTATaGAGGGGCCACTACACACGG +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSGLWLL*RGHYTR
Trigger: CCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGGCC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTCTGATTTGTGGCCTGTaGCTCCTATGGAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSLICGL*LLWRGH
Trigger: GTGGCCCCTCCATAGGAGCCACAGGCCACAAATCAG...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGCAGCTTCCTGATTTGTaGCCTGTGGCTCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKQLPDL*PVAPME
Trigger: CTCCATAGGAGCCACAGGCCACAAATCAGGAAGCTG...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGCTTTTCTGCATGGGGTaGGCAGAGCTTGGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKLFCMG*AELGFA
Trigger: AGCAAACCCAAGCTCTGCCCACCCCATGCAGAAAAG...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGCTTTTCTACCATGCCTaGCCCACTGCAGTTGCCACA +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKLFYHA*PTAVAT
Trigger: TGTGGCAACTGCAGTGGGCCAGGCATGGTAGAAAAG...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGCCACTCTGCTGTCACTaGAAGCAGAGGTATCCTCGT +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKPLCCH*KQRYPR
Trigger: ACGAGGATACCTCTGCTTCCAGTGACAGCAGAGTGG...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTAACTGTGGGAGAAGATaGACTCTGCGAGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFNCGRR*TLRAEP
Trigger: GGGCTCAGCTCGCAGAGTCCATCTTCTCCCACAGTT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGAACTGTGGGAGAAGATaGACTCTGCGAGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKNCGRR*TLRAEP
Trigger: GGGCTCAGCTCGCAGAGTCCATCTTCTCCCACAGTT...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCAAATGTGGCAACTGTaGGAGAAGATGGACTCTGCG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGQMWQL*EKMDSA
Trigger: CGCAGAGTCCATCTTCTCCCACAGTTGCCACATTTG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGCCCCCTCTCAAATGTaGCAACTGTGGGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWAPSQM*QLWEKM
Trigger: CATCTTCTCCCACAGTTGCCACATTTGAGAGGGGGC...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 72 bp CTGTGTCTTAGCTGGCAAAGGCTAATAAAGGCCTGTTaGTCCTTTTCTGCATGGGGTGGGCAGAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LCLSWQRLIKAC*SFSAWGGQSLG
Trigger: ACCCAAGCTCTGCCCACCCCATGCAGAAAAGGACAAACAGGCCTTTATTAGCCTTTGCCAGCTAAGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATCGGAGGCTGCTGCTATaGTGGAACTGGTCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHRRLLL*WNWSAA
Trigger: GGCAGCTGACCAGTTCCATCATAGCAGCAGCCTCCG...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGCAGGAAGGCCTGAGCTaGCTCCAGCACAGAATAGAT +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKQEGLS*LQHRID
Trigger: ATCTATTCTGTGCTGGAGTCAGCTCAGGCCTTCCTG...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGCTGGGAGTGAATCAATaGAGAGATCCCCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKLGVNQ*RDPQWA
Trigger: AGCCCATTGGGGATCTCTTCATTGATTCACTCCCAG...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTGGGAACTTTATTGGGTaGAATTGCTCTTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAGNFIG*NCSFPG
Trigger: CCCTGGGAAAGAGCAATTTCACCCAATAAAGTTCCC...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGAGTTGGCCACTTGGCTaGAGAGGTACTGAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRSWPLG*RGTEVF
Trigger: AAAAACTTCAGTACCTCTTCAGCCAAGTGGCCAACT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCACTGGGGCTCCAGGTTaGCCCACTCCAGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLTGAPG*PTPGTG
Trigger: CCCAGTTCCTGGAGTGGGTCAACCTGGAGCCCCAGT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTCTTGCTCAGCAATGGTaGCCCGATGCAGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSLAQQW*PDAEQP
Trigger: TGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAG...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTATAGAGCACTTGGTCTaGTGCTTCACTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAIEHLV*CFTCSA
Trigger: TGCTGAGCAAGTGAAGCATCAGACCAAGTGCTCTAT...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAAGGTACTGAGGATCTGTTTCTaGCTCTGCTCAGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: KLLFPREPGQRCFSDVKVLRICF*LCSETS
Trigger: AGAGGTCTCTGAGCAGAGTCAGAAACAGATCCTCAG...TACCTTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGGTGTGTAATACTCCATaGTGGGGTAGTGCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRVCNTP*WGSAAY
Trigger: ATAAGCTGCACTACCCCATCATGGAGTATTACACAC...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTTCTAGCTGCTTGTTGTaGTCTTCGAGGATCTGCATG +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFSSCLL*SSRICM
Trigger: CATGCAGATCCTCGAAGATCACAACAAGCAGCTAGA...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTAGAGCCACTGCCATCTaGTTCGGTGGGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSRATAI*FGGWLQ
Trigger: CTGCAGCCACCCACCGAATCAGATGGCAGTGGCTCT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGGGGTGACTGCCTTCTaGCTGCTGTGGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSGVTAF*LLWRGS
Trigger: GCTTCCTCTCCACAGCAGTCAGAAGGCAGTCACCCC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTGACATCCTGGCTCTTTaGCCCCACATCATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSDILAL*PHIICS
Trigger: GCTGCAGATGATGTGGGGTCAAAGAGCCAGGATGTC...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGGTAGAAGAACCAGAATaGACTGTTCTCCCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRVEEPE*TVLPLR
Trigger: CCTTAAGGGGAGAACAGTTCATTCTGGTTCTTCTAC...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGATACTACTCCAGACTTaGGGTGGGCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKILLQT*GGLPLP
Trigger: AGGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTAT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGGTTGCAAATGCCTTATaGTTAGCTGGGGACAATCAG +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRVANAL*LAGDNQ
Trigger: CTGATTGTCCCCAGCTAATCATAAGGCATTTGCAAC...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATGCCTAAGTGGGCTCTaGATCTATTCAACATTCCCA +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGCLSGL*IYSTFP
Trigger: TGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCA...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCTGTTAGATTCTCTGTaGCCACAGGTTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRLLDSL*PQVSVA
Trigger: AGCAACAGAAACCTGTGGTCACAGAGAATCTAACAG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGTTATGCTGTGAAGTCTaGCACCCTGGACCTGTGACT +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWLCCEV*HPGPVT
Trigger: AGTCACAGGTCCAGGGTGTCAGACTTCACAGCATAA...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTTATGCTGTGAAGTCTaGCACCCTGGACCTGTGACT +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKLCCEV*HPGPVT
Trigger: AGTCACAGGTCCAGGGTGTCAGACTTCACAGCATAA...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTAATATGCTCCCACTCTaGCTGATGCCCAGGTTCTAT +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYANMLPL*LMPRFY
Trigger: ATAGAACCTGGGCATCAGTCAGAGTGGGAGCATATT...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAATATGCTCCCACTCTaGCTGATGCCCAGGTTCTAT +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGNMLPL*LMPRFY
Trigger: ATAGAACCTGGGCATCAGTCAGAGTGGGAGCATATT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTTTCTCTGATACTATTTaGCAACAACCCCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLFSDTI*QQPQQM
Trigger: CATTTGCTGGGGTTGTTGTCAAATAGTATCAGAGAA...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGCTAGTCAGCCTTCCGTaGCAATGCCCAATCAATGTG +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKLVSLP*QCPINV
Trigger: CACATTGATTGGGCATTGTCACGGAAGGCTGACTAG...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTAAGCATAGCACAGCCTaGTGTCCTCCAGCTAGTCAG +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFKHSTA*CPPASQ
Trigger: CTGACTAGCTGGAGGACATCAGGCTGTGCTATGCTT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATACCATCTTGAGGAGGTaGAGGGCTGGTGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDTILRR*RAGDSS
Trigger: GCTGCTGTCACCAGCCCTGCACCTCCTCAAGATGGT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCACCATCTTGAGGAGGTaGAGGGCTGGTGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSTILRR*RAGDSS
Trigger: GCTGCTGTCACCAGCCCTGCACCTCCTCAAGATGGT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAAGGTATCGGGGAGGTATCTTTaGTCTCAGAATGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KLLFPREPGQRCFSDVKVSGRYL*SQNEAP
Trigger: AGGAGCCTCATTCTGAGAGCAAAGATACCTCCCCGA...TACCTTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTCGGGGAGGTATCTTTaGTCTCAGAATGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKSGRYL*SQNEAP
Trigger: AGGAGCCTCATTCTGAGAGCAAAGATACCTCCCCGA...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATCTGGCCACCGTCGCCTaGTTCCATACAAAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHLATVA*FHTKRL
Trigger: CAGCCGCTTTGTATGGAAGCAGGCGACGGTGGCCAG...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGACGTGCTCACTGGCCTaGAGATCATGCTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWTCSLA*RSCSLK
Trigger: CTTCAATGAGCATGATCTGCAGGCCAGTGAGCACGT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCCCGCATCTTTCCGCTaGGACCACTATCAAAAACAT +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGPASFR*DHYQKH
Trigger: ATGTTTTTGATAGTGGTCGCAGCGGAAAGATGCGGG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAGTCTTAAAAGACAATaGCCGCATCTTTCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGSLKRQ*PHLSAA
Trigger: CGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCCTTCACTTCCGTaGCACACAAGCATGCAATGC +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGFPSLP*HTSMQC
Trigger: GCATTGCATGCTTGTGTGGCACGGAAGTGAAGGAAA...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCTGGGCTCCACATTGCTaGCCCCAAAGGCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSWAPHC*PQRLPL
Trigger: AAGTGGCAGCCTTTGGGGGCAGCAATGTGGAGCCCA...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTCTCCAGGAACTGGGATaGTTCAATGACTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFLQELG*FNDWLP
Trigger: GGGAAGCCAGTCATTGAAGCATCCCAGTTCCTGGAG...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAAGGCCGGGGCTGGGCTaGCTCTCAGGCAAAAATACC +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPRPGLG*LSGKNT
Trigger: GGTATTTTTGCCTGAGAGGCAGCCCAGCCCCGGCCT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000402866.5
CDS-3UTR GCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCCATCTCAGCAAGCCTaGTGGCAAAATGCTCAATTC +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFPSQQA*WQNAQF
Trigger: GAATTGAGCATTTTGCCAGCAGGCTTGCTGAGATGG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATATTGCGGTGGTCTGTTaGTGCCTCAGTGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDIAVVC*CLSGAV
Trigger: GACGGCTCCACTGAGGCAGCAACAGACCACCGCAAT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCTTCGAGGATCTGCATaGGCGTCTCCAGGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSLRGSA*ASPGGS
Trigger: AGAGCCGCCTGGAGACGCGCATGCAGATCCTCGAAG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAAGCTCCCTCAGACGCTaGAGCTGGGACTCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPSSLRR*SWDSSC
Trigger: GCAGCTAGAGTCCCAGCTGCAGCGTCTGAGGGAGCT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCAGCCTGCAGAGCCACTaGCATCTGATTCGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSSLQSH*HLIRWV
Trigger: CACCCACCGAATCAGATGGCAGTGGCTCTGCAGGCT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATCTCCCGGGGGTGACTaGCTTCTGACTGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTSPGGD*LLTAVE
Trigger: CTCCACAGCAGTCAGAAGGCAGTCACCCCCGGGAGA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTGGCCAAGTGATATTTaGCTGGGCTGCAACAGAAAG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGWPSDI*LGCNRK
Trigger: CTTTCTGTTGCAGCCCAGGCAAATATCACTTGGCCA...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCCATGCCTGGCCCACTaGAGTTGCCACAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLPCLAH*SCHRPS
Trigger: TGAGGGCCTGTGGCAACTGCAGTGGGCCAGGCATGG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTATTCCCCACACATACTaGAGTGACTGTCCCTGGACC +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFIPHTY*SDCPWT
Trigger: GGTCCAGGGACAGTCACTGCAGTATGTGTGGGGAAT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTAACTACACAGTGCCATaGACAATATCCTTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLNYTVP*TISLED
Trigger: GTCTTCTAAGGATATTGTGCATGGCACTGTGTAGTT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAATGTGAATCCACTCTaGTGTCACTGGAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGNVNPL*CHWKQR
Trigger: CCTCTGCTTCCAGTGACAGCAGAGTGGATTCACATT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTTCCAACACAGATTCATaGCTGGTGGTTCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFSNTDS*LVVPGV
Trigger: GACCCCTGGAACCACCAGCCATGAATCTGTGTTGGA...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGTCCAACACAGATTCATaGCTGGTGGTTCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKSNTDS*LVVPGV
Trigger: GACCCCTGGAACCACCAGCCATGAATCTGTGTTGGA...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTTCACTTGCTCAGCAATGGTGACCCGATGCAGAACAGCCAGCCACACCATGGAAACTCCTCATCCTTTTaGCTGAGCCAGTCAATAATC +
Preference number: 4 (lower is better)
Translates to: LHLLSNGDPMQNSQPHHGNSSSF*LSQSII
Trigger: GATTATTGACTGGCTCAGCCAAAAGGATGAGGAGTT...TCCATGGTGTGGCTGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATCTCCCACAGTTCACTaGCCACCGTCGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTSPTVH*PPSPAS
Trigger: GGAAGCAGGCGACGGTGGCCAGTGAACTGTGGGAGA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCATCTCCCACAGTTCACTaGCCACCGTCGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPSPTVH*PPSPAS
Trigger: GGAAGCAGGCGACGGTGGCCAGTGAACTGTGGGAGA...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGAACAGCTTAATAGCCTaGATGTGCTCTGGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRNSLIA*MCSGSE
Trigger: TTCACTCCCAGAGCACATCCAGGCTATTAAGCTGTT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTCAGAAATGGCAAGTTaGTGGGCCAGATCATTCACC +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGSEMAS*WARSFT
Trigger: GGTGAATGATCTGGCCCACCAACTTGCCATTTCTGA...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAGTGCACATCAGAAATaGCAAGTTGGTGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGSAHQK*QVGGPD
Trigger: ATCTGGCCCACCAACTTGCCATTTCTGATGTGCACT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTAGTGCACATCAGAAATaGCAAGTTGGTGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYASAHQK*QVGGPD
Trigger: ATCTGGCCCACCAACTTGCCATTTCTGATGTGCACT...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATGGCCCAAAGTCCCGGTaGGCATCCTGGAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHGPKSR*ASWSCL
Trigger: TAAGCAGCTCCAGGATGCCCACCGGGACTTTGGGCC...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGGCCCAAAGTCCCGGTaGGCATCCTGGAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTGPKSR*ASWSCL
Trigger: TAAGCAGCTCCAGGATGCCCACCGGGACTTTGGGCC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTGTGGTTAAAGTTACCAGGTCCAAGCGCAGGGCTTTCTGGACTCTGCGGAGTTAGATTTCCAGGGCTGTaGTTAAAGTTACCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LWLKLPGPSAGLSGLCGVRFPGL*LKLPGP
Trigger: TGGACCTGGTAACTTTAACCACAGCCCTGGAAATCT...AACTCCGCAGAGTCCAGAAAGCCCTGCGCTTGGACCTGGTAACTTTAACCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCATGGCGCTGGTCACACTaGCTGCCTGAGTTGGCCACT +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPWRWSH*LPELAT
Trigger: AGTGGCCAACTCAGGCAGCCAGTGTGACCAGCGCCA...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATAGCAGGACACCAAGGTaGCGCTGGTCACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHSRTPR*RWSHWL
Trigger: CAGCCAGTGTGACCAGCGCCACCTTGGTGTCCTGCT...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAAGCAGGACACCAAGGTaGCGCTGGTCACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTSRTPR*RWSHWL
Trigger: CAGCCAGTGTGACCAGCGCCACCTTGGTGTCCTGCT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAAGCAGGACACCAAGGTaGCGCTGGTCACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPSRTPR*RWSHWL
Trigger: CAGCCAGTGTGACCAGCGCCACCTTGGTGTCCTGCT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATGACGGGGCACCTGAATaGCCTCATGAAGCAGGACAC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDDGAPE*PHEAGH
Trigger: GTGTCCTGCTTCATGAGGCCATTCAGGTGCCCCGTC...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAGTCAAGAAGCAGGTCTaGCAGATGTCAACGTTGAAT +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGVKKQV*QMSTLN
Trigger: ATTCAACGTTGACATCTGCCAGACCTGCTTCTTGAC...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCCCTCATGTTCTCACTaGATGTGGTCGGTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAPSCSH*MWSVCN
Trigger: ATTACACACCGACCACATCCAGTGAGAACATGAGGG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCCCTCATGTTCTCACTaGATGTGGTCGGTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGPSCSH*MWSVCN
Trigger: ATTACACACCGACCACATCCAGTGAGAACATGAGGG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGTCTCAGCAAGCCTGCTaGCAAAATGCTCAATTCGGG +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWSQQAC*QNAQFG
Trigger: CCCGAATTGAGCATTTTGCCAGCAGGCTTGCTGAGA...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACTGCTGTCCAAAGGCTaGCTCCCGGTCTGTGATGGG +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTLLSKG*LPVCDG
Trigger: CCCATCACAGACCGGGAGCCAGCCTTTGGACAGCAG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTTTCTCATCTTCCAAGTaGGCCAGGATCTTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFFSSSK*ARIFCS
Trigger: GCTACAGAAGATCCTGGCCCACTTGGAAGATGAGAA...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTCTCATCTTCCAAGTaGGCCAGGATCTTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGFSSSK*ARIFCS
Trigger: GCTACAGAAGATCCTGGCCCACTTGGAAGATGAGAA...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTGCCATCTGATTCGGTaGGTGGCTGCAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSCHLIR*VAAGEA
Trigger: AGCTTCTCCTGCAGCCACCCACCGAATCAGATGGCA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGTGCAGCCTCGGTATCTaGAGTAGTCTGTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKCSLGI*SSLSLL
Trigger: GAGAAGGGACAGACTACTCCAGATACCGAGGCTGCA...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTCACAGGCTGACATCCTaGCTCTTTGACCCCACATCA +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFHRLTS*LFDPTS
Trigger: TGATGTGGGGTCAAAGAGCCAGGATGTCAGCCTGTG...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGCAGAACTTCGCACACTaGGGAAGGCATGACGGAGTT +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKQNFAH*GRHDGV
Trigger: AACTCCGTCATGCCTTCCCCAGTGTGCGAAGTTCTG...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGTATAGGATGGGGATCTaGCTCCATCAAGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKYRMGI*LHQEAS
Trigger: GCTGGCCTCTTGATGGAGCCAGATCCCCATCCTATA...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCAACTCGCAACTCAGTaGGTCTCTCAAAATGCTGAG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGQLATQ*VSQNAE
Trigger: CTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCAACTCGCAACTCAGTaGGTCTCTCAAAATGCTGAG +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAQLATQ*VSQNAE
Trigger: CTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTTGGAAGGGTGTTGGATaGCAGTCATACTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFWKGVG*QSYYSR
Trigger: TCTGGAGTAGTATGACTGCCATCCAACACCCTTCCA...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCGGCCTGTGGCTCCTATaGAGGGGCCACTACACACGG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLGLWLL*RGHYTR
Trigger: CCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGGCC...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGCTTGCTGTTGTTGTCTaGGTGGAAAGTGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWLAVVV*VESGQL
Trigger: AAGCTGGCCACTTTCCACCCAGACAACAACAGCAAG...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTGTTCAGTTTGAGGATTaGATTCACCTTCCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLVQFED*IHLPEL
Trigger: TAACTCTGGAAGGTGAATCCAATCCTCAAACTGAAC...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTTGGATAAAGAGATCATaGTATATGTCGCCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLWIKRS*YMSPRK
Trigger: CTTCCTAGGCGACATATACCATGATCTCTTTATCCA...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAGAAAGCTGCCTAAGTaGGCTCTGAATCTATTCAAC +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPARKLPK*ALNLFN
Trigger: GTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTCTTTTCTGCATGGGGTaGGCAGAGCTTGGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFLFCMG*AELGFA
Trigger: AGCAAACCCAAGCTCTGCCCACCCCATGCAGAAAAG...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGCCACTGGCCCACTGCTaGATTATAATACAACACCCC +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWPLAHC*IIIQHP
Trigger: GGGGTGTTGTATTATAATCCAGCAGTGGGCCAGTGG...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATGCAACCCTAAGCTTCTaGACCCAAGCCACTGCCCTG +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDATLSF*TQATAL
Trigger: CAGGGCAGTGGCTTGGGTCCAGAAGCTTAGGGTTGC...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAATCCAACCCCAAGTTaGATTCATAGTACCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPANPTPS*IHSTQG
Trigger: TCCTTGGGTACTATGAATCCAACTTGGGGTTGGATT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGCTAGCCTTTCTAATCTaGAGGGAAGGGCACATGTCC +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWLAFLI*REGHMS
Trigger: GGACATGTGCCCTTCCCTCCAGATTAGAAAGGCTAG...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTTGCCAACCCATTTCCTaGAGCACCAGAAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFCQPIS*STRNSN
Trigger: GTTTGAGTTTCTGGTGCTCCAGGAAATGGGTTGGCA...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGGATTGGCCTCTTCCTaGCCTCAGGGTTTCTCATTT +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWGLASS*PQGFSF
Trigger: AAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCC...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTTATGTGAAGGGAAATTaGATGGGATTTTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLYVKGN*MGFLAL
Trigger: CAAGGCCAAAAATCCCATCCAATTTCCCTTCACATA...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGCAAATGTGGCAACTGTaGGAGAAGATGGACTCTGCG +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKQMWQL*EKMDSA
Trigger: CGCAGAGTCCATCTTCTCCCACAGTTGCCACATTTG...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGGCCCCCTCTCAAATGTaGCAACTGTGGGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKAPSQM*QLWEKM
Trigger: CATCTTCTCCCACAGTTGCCACATTTGAGAGGGGGC...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTAAGCACCACAGTGAGTaGCAATCAAAGTTAACCAAT +
Preference number: 4 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLKHHSE*QSKLTN
Trigger: ATTGGTTAACTTTGATTGCCACTCACTGTGGTGCTT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 72 bp TCCATCACGTGCTCACTGGCCTGCAGATCATGCTCATaGAAGATTTCCAGGGCTGTGGTTAAAGTTACCAGG +
Preference number: 4 (lower is better)
Translates to: SITCSLACRSCS*KISRAVVKVTR
Trigger: CCTGGTAACTTTAACCACAGCCCTGGAAATCTTCAATGAGCATGATCTGCAGGCCAGTGAGCACGTGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCGGAGGCTGCTGCTATaGTGGAACTGGTCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLRRLLL*WNWSAA
Trigger: GGCAGCTGACCAGTTCCATCATAGCAGCAGCCTCCG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR TCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTCAGGAAGGCCTGAGCTaGCTCCAGCACAGAATAGAT +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSQEGLS*LQHRID
Trigger: ATCTATTCTGTGCTGGAGTCAGCTCAGGCCTTCCTG...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATACCAGCTCCATACAAAGCGGCTaGGATTCTGGATCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: LKLVTGIYCGVLMPAHTSSIQSG*DSGSAV
Trigger: AACAGCGGATCCAGAATCTCAGCCGCTTTGTATGGA...GCTGGTATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTTCCATACAAAGCGGCTaGGATTCTGGATCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFSIQSG*DSGSAV
Trigger: AACAGCGGATCCAGAATCTCAGCCGCTTTGTATGGA...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGCTGGGAGTGAATCAATaGAGAGATCCCCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKLGVNQ*RDPQWA
Trigger: AGCCCATTGGGGATCTCTTCATTGATTCACTCCCAG...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCAGGGAACTTTATTGGGTaGAATTGCTCTTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPGNFIG*NCSFPG
Trigger: CCCTGGGAAAGAGCAATTTCACCCAATAAAGTTCCC...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGGCAGTGCGATAAGCTaGGAACTTAATGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGGSAIS*ELNVVQ
Trigger: CTGAACAACATTAAGTTCTCAGCTTATCGCACTGCC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGATAGAGCACTTGGTCTaGTGCTTCACTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWIEHLV*CFTCSA
Trigger: TGCTGAGCAAGTGAAGCATCAGACCAAGTGCTCTAT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATGTCAGCCTCCAGCACTaGTTGCACAGGCAGATAACC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDVSLQH*LHRQIT
Trigger: GGTTATCTGCCTGTGCAATCAGTGCTGGAGGCTGAC...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAAAGAAGGAGCAATTTTaGCTTTCCATCTCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGKKEQF*LSISAS
Trigger: GCTTGCTGAGATGGAAAGTCAAAATTGCTCCTTCTT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGAAGAAGGAGCAATTTTaGCTTTCCATCTCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRKKEQF*LSISAS
Trigger: GCTTGCTGAGATGGAAAGTCAAAATTGCTCCTTCTT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCGGGGTGACTGCCTTCTaGCTGCTGTGGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLGVTAF*LLWRGS
Trigger: GCTTCCTCTCCACAGCAGTCAGAAGGCAGTCACCCC...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATGACATCCTGGCTCTTTaGCCCCACATCATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDDILAL*PHIICS
Trigger: GCTGCAGATGATGTGGGGTCAAAGAGCCAGGATGTC...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGCTGAGGAAAGGCTTTaGCCGGAACCAGGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTAEERL*PEPGED
Trigger: GTCCTCTCCTGGTTCCGGTCAAAGCCTTTCCTCAGC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAACCCTTTTGCCTCCCTaGGTTGCGCCAGAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTTLLPP*VAPESR
Trigger: CCTACTCTCTGGCGCAACTCAGGGAGGCAAAAGGGT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAAATCTGTCCTGGAGCTaGAGTAATAGAACACACACT +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGNLSWS*SNRTHT
Trigger: AGTGTGTGTTCTATTACTTCAGCTCCAGGACAGATT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTGTAGAAGAACCAGAATaGACTGTTCTCCCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAVEEPE*TVLPLR
Trigger: CCTTAAGGGGAGAACAGTTCATTCTGGTTCTTCTAC...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGTTGCAAATGCCTTATaGTTAGCTGGGGACAATCAG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGVANAL*LAGDNQ
Trigger: CTGATTGTCCCCAGCTAATCATAAGGCATTTGCAAC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAGAGCTAGTTCAGTTTaGGGATTGGATTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGRASSV*GLDSPS
Trigger: GGAAGGTGAATCCAATCCTCAAACTGAACTAGCTCT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAATAAACTTAGGCAAATaGAGTCAACTGCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGINLGK*SQLQGS
Trigger: AGAGCCCTGCAGTTGACTTCATTTGCCTAAGTTTAT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTGTTAGATTCTCTGTaGCCACAGGTTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFLLDSL*PQVSVA
Trigger: AGCAACAGAAACCTGTGGTCACAGAGAATCTAACAG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATACCGTCACTCCCTCCTaGTTGTGGTGGCAACTGTTG +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDTVTPS*LWWQLL
Trigger: CAACAGTTGCCACCACAATCAGGAGGGAGTGACGGT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGTGCCCAGAGACCTCATaGACACTAAGGCAGATGTTA +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWCPETS*TLRQML
Trigger: TAACATCTGCCTTAGTGTTCATGAGGTCTCTGGGCA...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAACCACAAAATGTCAGTaGCCCCTTAGTGAGAATTCA +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGTTKCQ*PLSENS
Trigger: TGAATTCTCACTAAGGGGTCACTGACATTTTGTGGT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGCTAGTCAGCCTTCCGTaGCAATGCCCAATCAATGTG +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKLVSLP*QCPINV
Trigger: CACATTGATTGGGCATTGTCACGGAAGGCTGACTAG...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCTTTCTGTCATCTATGTaGAGGGAAATTGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAFLSSM*REIGWD
Trigger: ATCCCATCCAATTTCCCTTCACATAGATGACAGAAA...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGGGGAAAGCACCACAGTaGGTGGCAATCAAAGTTAAC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKGKAPQ*VAIKVN
Trigger: GTTAACTTTGATTGCCACTCACTGTGGTGCTTTCCC...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTACCATCTTGAGGAGGTaGAGGGCTGGTGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSTILRR*RAGDSS
Trigger: GCTGCTGTCACCAGCCCTGCACCTCCTCAAGATGGT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGTCGGGGAGGTATCTTTaGTCTCAGAATGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKSGRYL*SQNEAP
Trigger: AGGAGCCTCATTCTGAGAGCAAAGATACCTCCCCGA...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTACGTGCTCACTGGCCTaGAGATCATGCTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFTCSLA*RSCSLK
Trigger: CTTCAATGAGCATGATCTGCAGGCCAGTGAGCACGT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGAGTCTTAAAAGACAATaGCCGCATCTTTCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWSLKRQ*PHLSAA
Trigger: CGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCATTTCCTTCACTTCCGTaGCACACAAGCATGCAATGC +
Preference number: 4 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPFPSLP*HTSMQC
Trigger: GCATTGCATGCTTGTGTGGCACGGAAGTGAAGGAAA...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTATGTCAACGTTGAATTaGTTCAGACTCCGGTACCTG +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAMSTLN*FRLRYL
Trigger: CAGGTACCGGAGTCTGAAGCAATTCAACGTTGACAT...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGATGTCAACGTTGAATTaGTTCAGACTCCGGTACCTG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGMSTLN*FRLRYL
Trigger: CAGGTACCGGAGTCTGAAGCAATTCAACGTTGACAT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGCCATCTCAGCAAGCCTaGTGGCAAAATGCTCAATTC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKPSQQA*WQNAQF
Trigger: GAATTGAGCATTTTGCCAGCAGGCTTGCTGAGATGG...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCTCAGCTGCCTCCTCATaGTGCCACTTCAGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLSAASS*CHFRRL
Trigger: GAGGCGCCTGAAGTGGCAGCATGAGGAGGCAGCTGA...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTATTGCGGTGGTCTGTTaGTGCCTCAGTGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSIAVVC*CLSGAV
Trigger: GACGGCTCCACTGAGGCAGCAACAGACCACCGCAAT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAAGGCGGCTCTTATGTTaGCGAAGGATACGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTRRLLC*RRIRAS
Trigger: CGAGGCCCGTATCCTTCGGCAACATAAGAGCCGCCT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCAGCTCCCTCAGACGCTaGAGCTGGGACTCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLSSLRR*SWDSSC
Trigger: GCAGCTAGAGTCCCAGCTGCAGCGTCTGAGGGAGCT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAAGCCTGCAGAGCCACTaGCATCTGATTCGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPSLQSH*HLIRWV
Trigger: CACCCACCGAATCAGATGGCAGTGGCTCTGCAGGCT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATCCCTTCTCCCATCACTaGCCGCATGCACCTCACATA +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDPFSHH*PHAPHI
Trigger: TATGTGAGGTGCATGCGGGCAGTGATGGGAGAAGGG...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTTCGGGGATACCCTTTTaGCTCCCTGAGTTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSSGIPF*LPELRQ
Trigger: CTGGCGCAACTCAGGGAGGCAAAAGGGTATCCCCGA...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGACCACAGGTTTCTGTTaGTTTGGTCTTGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKTTGFC*FGLEDS
Trigger: GCTGTCCTCAAGACCAAAGCAACAGAAACCTGTGGT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTATTCAACTCTTGACCTaGTGCTTCAGTCCACCTACA +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFIQLLT*CFSPPT
Trigger: TGTAGGTGGACTGAAGCAGCAGGTCAAGAGTTGAAT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCGTCAGGCCTCAATACTaGCATAGGGGACAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSVRPQY*HRGQQG
Trigger: CCCTTGCTGTCCCCTATGGCAGTATTGAGGCCTGAC...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACAATGGGCTCCCAAGTaGCTCGGACTCCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTQWAPK*LGLPQL
Trigger: AAGCTGAGGGAGTCCGAGCCACTTGGGAGCCCATTG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCGCTGCGACCACTATCAAAAACATTGAGGAGCCAATTGAGGCTCATGTCCACAGAAATGGCAAGTTGGTaGGCCAGATCATTCACCAAC +
Preference number: 4 (lower is better)
Translates to: PLRPLSKTLRSQLRLMSTEMASW*ARSFTN
Trigger: GTTGGTGAATGATCTGGCCCACCAACTTGCCATTTC...TGTGGACATGAGCCTCAATTGGCTCCTCAATGTTTTTGATAGTGGTCGCAGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp AAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAAGGTAATCTGTTCCAGGGCCTaGGAATTCTCCATTGACAAG +
Preference number: 4 (lower is better)
Translates to: KLLFPREPGQRCFSDVKVICSRA*EFSIDK
Trigger: CTTGTCAATGGAGAATTCCCAGGCCCTGGAACAGAT...TACCTTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGATCTGTTCCAGGGCCTaGGAATTCTCCATTGACAAG +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKICSRA*EFSIDK
Trigger: CTTGTCAATGGAGAATTCCCAGGCCCTGGAACAGAT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAGTAGGGAACTTTATTaGGTGAAATTGCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPASRELY*VKLLFP
Trigger: GGGAAAGAGCAATTTCACCCAATAAAGTTCCCTACT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTAGATTTCCAGGGCTGTaGTTAAAGTTACCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFRFPGL*LKLPGP
Trigger: TGGACCTGGTAACTTTAACCACAGCCCTGGAAATCT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTAGATTTCCAGGGCTGTaGTTAAAGTTACCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYARFPGL*LKLPGP
Trigger: TGGACCTGGTAACTTTAACCACAGCCCTGGAAATCT...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGGGATGCTTCAATGACTaGCTTCCCGGTGCTAAAACG +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKGCFND*LPGAKT
Trigger: CGTTTTAGCACCGGGAAGCCAGTCATTGAAGCATCC...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTAAAAATACCCTTGACTaGGCAAACGCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAKNTLD*ANAGRA
Trigger: TGCTCTTCCTGCGTTTGCCCAGTCAAGGGTATTTTT...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000402866.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAAAAATACCCTTGACTaGGCAAACGCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGKNTLD*ANAGRA
Trigger: TGCTCTTCCTGCGTTTGCCCAGTCAAGGGTATTTTT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000402866.5
CDS-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGCCCTCATGTTCTCACTaGATGTGGTCGGTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWPSCSH*MWSVCN
Trigger: ATTACACACCGACCACATCCAGTGAGAACATGAGGG...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATGTGGCCACACTGCATaGAGCCTGCTGTCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTCGHTA*SLLSKG
Trigger: GCCTTTGGACAGCAGGCTCCATGCAGTGTGGCCACA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCTGTTGCTGCCTCAGTaGAGCCGTCAGCCAGACTGG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLLLLPQ*SRQPDW
Trigger: CCAGTCTGGCTGACGGCTCCACTGAGGCAGCAACAG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCGGGGCCAGTGGAAACTaGAAAGGTTGGGTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSGASGN*KGWVKA
Trigger: AGCCTTCACCCAACCTTTCCAGTTTCCACTGGCCCC...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCAAGTGATATTTGCCTaGGCTGCAACAGAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAQVIFA*AATERY
Trigger: GTACCTTTCTGTTGCAGCCCAGGCAAATATCACTTG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGCCTTATGATTAGCTaGGGACAATCAGCCACCTCA +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKCLMIS*GQSATS
Trigger: TGAGGTGGCTGATTGTCCCCAGCTAATCATAAGGCA...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCGTTCAGTTTGAGGATTaGATTCACCTTCCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAVQFED*IHLPEL
Trigger: TAACTCTGGAAGGTGAATCCAATCCTCAAACTGAAC...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTGGGTTTGCTCTATTTTaGCACCTGAACCATTTAGGG +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAGFALF*HLNHLG
Trigger: CCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCC...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTTGTCCTTTTCTGCATaGGGTGGGCAGAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSLSFSA*GGQSLG
Trigger: ACCCAAGCTCTGCCCACCCCATGCAGAAAAGGACAA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGCAACCCTAAGCTTCTaGACCCAAGCCACTGCCCTG +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSATLSF*TQATAL
Trigger: CAGGGCAGTGGCTTGGGTCCAGAAGCTTAGGGTTGC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCCATTTACCTTACTGTaGGAAAATTCCCCACACATA +
Preference number: 4 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAPFTLL*ENSPHI
Trigger: TATGTGTGGGGAATTTTCCCACAGTAAGGTAAATGG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAACCCCAGCACCATCTTaGGGAGGTGCAGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTTPAPS*GGAGLV
Trigger: CACCAGCCCTGCACCTCCTCAAGATGGTGCTGGGGT...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATCAGGAAGGCCTGAGCTaGCTCCAGCACAGAATAGAT +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDQEGLS*LQHRID
Trigger: ATCTATTCTGTGCTGGAGTCAGCTCAGGCCTTCCTG...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATCCTCCATTGCCCCTTaGATCTCCAAGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTSSIAP*ISKSCS
Trigger: GGAGCAGCTCTTGGAGATTCAAGGGGCAATGGAGGA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTCTGGGAGTGAATCAATaGAGAGATCCCCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSLGVNQ*RDPQWA
Trigger: AGCCCATTGGGGATCTCTTCATTGATTCACTCCCAG...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCGTTTCCATCGGACGTTaGTCTGTTCCAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLVSIGR*SVPGPG
Trigger: CCCAGGCCCTGGAACAGATCAACGTCCGATGGAAAC...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATAAGGCAGTCAGGCAGTaGATGACCTCTACCACATCC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDKAVRQ*MTSTTS
Trigger: GGATGTGGTAGAGGTCATTCACTGCCTGACTGCCTT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATCACAGAGTGGCACGTTaGCCAGGATGCCTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHHRVAR*PGCLFP
Trigger: AGGAAAGAGGCATCCTGGTCAACGTGCCACTCTGTG...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCAAGTTGGCCACTTGGCTaGAGAGGTACTGAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPSWPLG*RGTEVF
Trigger: AAAAACTTCAGTACCTCTTCAGCCAAGTGGCCAACT...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTGGCAGATGTCAACGTTaGATTGCTTCAGACTCCGGT +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSGRCQR*IASDSG
Trigger: ACCGGAGTCTGAAGCAATTCAACGTTGACATCTGCC...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTGCTGAGGGTGTTTGCTaGAATAATGCTTGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSAEGVC*NNAWSG
Trigger: TCCGCTCCAAGCATTATTTCAGCAAACACCCTCAGC...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGTCAGCCTCCAGCACTaGTTGCACAGGCAGATAACC +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSVSLQH*LHRQIT
Trigger: GGTTATCTGCCTGTGCAATCAGTGCTGGAGGCTGAC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGACGGAGTTTCTCCATaGTGTCCTCCAAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTDGVSP*CPPSTG
Trigger: GCCTGTGCTTGGAGGACATCATGGAGAAACTCCGTC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATACACTGGGGAAGGCATaGCGGAGTTTCTCCATGATG +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDTLGKA*RSFSMM
Trigger: CATCATGGAGAAACTCCGTCATGCCTTCCCCAGTGT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGAGAGCTAGTTCAGTTTaGGGATTGGATTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWRASSV*GLDSPS
Trigger: GGAAGGTGAATCCAATCCTCAAACTGAACTAGCTCT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGAGAGCTAGTTCAGTTTaGGGATTGGATTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKRASSV*GLDSPS
Trigger: GGAAGGTGAATCCAATCCTCAAACTGAACTAGCTCT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTTAGAATTTAATGTGTaGGTGAGGCCAGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKLEFNV*VRPGEH
Trigger: GTGCTCTCCTGGCCTCACTCACACATTAAATTCTAA...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCTGTTGCTTTGGTCTTaGGGACAGCCCACCCCAAAC +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSLLLWS*GQPTPN
Trigger: GTTTGGGGTGGGCTGTCCTCAAGACCAAAGCAACAG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTTCTCTGATACTATTTaGCAACAACCCCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRFSDTI*QQPQQM
Trigger: CATTTGCTGGGGTTGTTGTCAAATAGTATCAGAGAA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAGTCCTAACTGTTCTCTaGTACTATTTGACAACAACC +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGVLTVL*YYLTTT
Trigger: GGTTGTTGTCAAATAGTATCAGAGAACAGTTAGGAC...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGAATGCCCAATCAATGTaGATCCACTCTGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKNAQSM*IHSAVT
Trigger: AGTGACAGCAGAGTGGATTCACATTGATTGGGCATT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTTGGGATTTTTGGCCTTaGAATGGTGCCACAGACCAT +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFWDFWP*NGATDH
Trigger: ATGGTCTGTGGCACCATTTCAAGGCCAAAAATCCCA...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGCCAATTTTCATCCTGTaGCCAGTTCTTGTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKPIFIL*PVLVAS
Trigger: GCTGGCTACAAGAACTGGTCACAGGATGAAAATTGG...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTGTGGTTAAAGTTACCAGGTCCAAGCGCAGGGCTTTCTGGACTCTGCGGAGTTTGCATGACCATAGGTTaGATAAAAACCAAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LWLKLPGPSAGLSGLCGVCMTIG*IKTKAH
Trigger: ATGAGCCTTGGTTTTTATGCAACCTATGGTCATGCA...AACTCCGCAGAGTCCAGAAAGCCCTGCGCTTGGACCTGGTAACTTTAACCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATAGGTGCTTCGGAGGCTaGTGCTATGATGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDRCFGG*CYDGTG
Trigger: ACCAGTTCCATCATAGCAGCAGCCTCCGAAGCACCT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTAATAGCCTGGATGTaGTCTGGGAGTGAATCAATG +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGLIAWM*SGSESM
Trigger: CATTGATTCACTCCCAGAGCACATCCAGGCTATTAA...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGCTGGCCTGCAGATCATaGTCATTGAAGATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKLACRS*SLKISR
Trigger: CCTGGAAATCTTCAATGAGCATGATCTGCAGGCCAG...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCACCACATCCATCACGTaGTCACTGGCCTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSTTSIT*SLACRS
Trigger: TGATCTGCAGGCCAGTGAGCACGTGATGGATGTGGT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGAGTCTTAAAAGACAATaGCCGCATCTTTCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKSLKRQ*PHLSAA
Trigger: CGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACT...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCACTGGTCCTCGTCTATaGTGTCATCTGGGGACAAGC +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSTGPRL*CHLGTS
Trigger: GCTTGTCCCCAGATGACAGCATAGACGAGGACCAGT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCTTTCTGTGGCCACACTaGATGGAGCCTGCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSFLWPH*MEPAVQ
Trigger: TTGGACAGCAGGCTCCATGCAGTGTGGCCACAGAAA...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCCAGAAGCTCCTCATTaGGGTGGTCTGTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSPEAPH*GGLLLP
Trigger: AGGCAGCAACAGACCACCGCAATGAGGAGCTTCTGG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCAGGCGGCTCTTATGTTaGCGAAGGATACGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLRRLLC*RRIRAS
Trigger: CGAGGCCCGTATCCTTCGGCAACATAAGAGCCGCCT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGTAGCCAGTTGCAAATaGCTTATGATTAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWVASCK*LMISWG
Trigger: TCCCCAGCTAATCATAAGGCATTTGCAACTGGCTAC...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTACCCACTGGCCCACTaGTGGATTATAATACAACAC +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKYPLAH*WIIIQH
Trigger: GTGTTGTATTATAATCCAGCAGTGGGCCAGTGGGTA...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCTGCCCGCCTACCACCTaGTCAACCATCTATCCAGAT +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSCPPTT*STIYPD
Trigger: ATCTGGATAGATGGTTGAGCAGGTGGTAGGCGGGCA...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCATTCCCCACACATACTaGAGTGACTGTCCCTGGACC +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSIPHTY*SDCPWT
Trigger: GGTCCAGGGACAGTCACTGCAGTATGTGTGGGGAAT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAAACTACACAGTGCCATaGACAATATCCTTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGNYTVP*TISLED
Trigger: GTCTTCTAAGGATATTGTGCATGGCACTGTGTAGTT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGAATGTGAATCCACTCTaGTGTCACTGGAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKNVNPL*CHWKQR
Trigger: CCTCTGCTTCCAGTGACAGCAGAGTGGATTCACATT...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGAGGCAGCTACTTTCTTaGTTTTCTGTCATCTATGTG +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRRQLLS*FSVIYV
Trigger: CACATAGATGACAGAAAAGCAAGAAAGTAGCTGCCT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGTCAGGCCTCAATACTaGCATAGGGGACAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSVRPQY*HRGQQG
Trigger: CCCTTGCTGTCCCCTATGGCAGTATTGAGGCCTGAC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAGTCAGGCCTCAATACTaGCATAGGGGACAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPVRPQY*HRGQQG
Trigger: CCCTTGCTGTCCCCTATGGCAGTATTGAGGCCTGAC...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCCAGTCATGACATCGTaGGAGGGTGTAAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSPVMTS*EGVRAS
Trigger: GGATGCCCTTACACCCTCCCACGATGTCATGACTGG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR CCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCACACAGATTCATGGCTaGTGGTTCCAGGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSTQIHG*WFQGSR
Trigger: TCTGGACCCCTGGAACCACCAGCCATGAATCTGTGT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATAAGCGGCTGAGATTCTaGATCCGCTGTTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHKRLRF*IRCFGE
Trigger: CTCCCCGAAACAGCGGATCCAGAATCTCAGCCGCTT...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAAAGCGGCTGAGATTCTaGATCCGCTGTTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTKRLRF*IRCFGE
Trigger: CTCCCCGAAACAGCGGATCCAGAATCTCAGCCGCTT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCAAACAGCTTAATAGCCTaGATGTGCTCTGGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPNSLIA*MCSGSE
Trigger: TTCACTCCCAGAGCACATCCAGGCTATTAAGCTGTT...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGTCAGAAATGGCAAGTTaGTGGGCCAGATCATTCACC +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKSEMAS*WARSFT
Trigger: GGTGAATGATCTGGCCCACCAACTTGCCATTTCTGA...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGAGTAGGGAACTTTATTaGGTGAAATTGCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRSRELY*VKLLFP
Trigger: GGGAAAGAGCAATTTCACCCAATAAAGTTCCCTACT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTGGATGCTTCAATGACTaGCTTCCCGGTGCTAAAACG +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSGCFND*LPGAKT
Trigger: CGTTTTAGCACCGGGAAGCCAGTCATTGAAGCATCC...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTAAACTACCAGAGATGTaGCGGCTCTTGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFKLPEM*RLLEMS
Trigger: TGACATCTCCAAGAGCCGCCACATCTCTGGTAGTTT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000402866.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTGTTCTTTAAGGTTGTaGCAAAGTCCCTCATGTTCT +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRCSLRL*QSPSCS
Trigger: AGAACATGAGGGACTTTGCCACAACCTTAAAGAACA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTCTCAGCAAGCCTGCTaGCAAAATGCTCAATTCGGG +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSSQQAC*QNAQFG
Trigger: CCCGAATTGAGCATTTTGCCAGCAGGCTTGCTGAGA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGTCTATGCTGTCATCTaGGGACAAGCTGTCATTAAA +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGVYAVI*GQAVIK
Trigger: TTTAATGACAGCTTGTCCCCAGATGACAGCATAGAC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATGCCGCAGCAGGTACTaGTCCTCGTCTATGCTGTCA +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTCRSRY*SSSMLS
Trigger: TGACAGCATAGACGAGGACCAGTACCTGCTGCGGCA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTTTCTCATCTTCCAAGTaGGCCAGGATCTTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFFSSSK*ARIFCS
Trigger: GCTACAGAAGATCCTGGCCCACTTGGAAGATGAGAA...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCGCCTCAGCTCTCCCTaGAGAATCCGGTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSRLSSP*RIRFSS
Trigger: AGATGAGAACCGGATTCTCCAGGGAGAGCTGAGGCG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAAGCTCCTCATTGCGGTaGTCTGTTGCTGCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTSSSLR*SVAASV
Trigger: CACTGAGGCAGCAACAGACCACCGCAATGAGGAGCT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACTCAGACGCTGCAGCTaGGACTCTAGCTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPLRRCS*DSSCLL
Trigger: CAACAAGCAGCTAGAGTCCCAGCTGCAGCGTCTGAG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATGCCATCTGATTCGGTaGGTGGCTGCAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTCHLIR*VAAGEA
Trigger: AGCTTCTCCTGCAGCCACCCACCGAATCAGATGGCA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATCACAGGCTGACATCCTaGCTCTTTGACCCCACATCA +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDHRLTS*LFDPTS
Trigger: TGATGTGGGGTCAAAGAGCCAGGATGTCAGCCTGTG...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATCAGAACTTCGCACACTaGGGAAGGCATGACGGAGTT +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDQNFAH*GRHDGV
Trigger: AACTCCGTCATGCCTTCCCCAGTGTGCGAAGTTCTG...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATTATAGGATGGGGATCTaGCTCCATCAAGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDYRMGI*LHQEAS
Trigger: GCTGGCCTCTTGATGGAGCCAGATCCCCATCCTATA...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAATTCATAATGCTGGATaGAACCTTGGGGTAATTAGG +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGIHNAG*NLGVIR
Trigger: CCTAATTACCCCAAGGTTCCATCCAGCATTATGAAT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGGGTTTGCTCTATTTTaGCACCTGAACCATTTAGGG +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWGFALF*HLNHLG
Trigger: CCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCC...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCGGGGTGGGCAGAGCTTaGGTTTGCTCTATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSGVGRA*VCSILA
Trigger: TGCCAAAATAGAGCAAACCCAAGCTCTGCCCACCCC...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCTTGTCCTTTTCTGCATaGGGTGGGCAGAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSLSFSA*GGQSLG
Trigger: ACCCAAGCTCTGCCCACCCCATGCAGAAAAGGACAA...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACTCGTAATGGCTTTTTaGCCTCTATCAAATTCTGTC +
Preference number: 4 (lower is better)
Translates to: DSPPQTSMERDILGEQPGLVMAF*PLSNSV
Trigger: GACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTGGATTGGCCTCTTCCTaGCCTCAGGGTTTCTCATTT +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSGLASS*PQGFSF
Trigger: AAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCC...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTATGTGAAGGGAAATTaGATGGGATTTTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: AELGFALFWHLNHLGEPRYVKGN*MGFLAL
Trigger: CAAGGCCAAAAATCCCATCCAATTTCCCTTCACATA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATTCCATACAAAGCGGCTaGGATTCTGGATCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDSIQSG*DSGSAV
Trigger: AACAGCGGATCCAGAATCTCAGCCGCTTTGTATGGA...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTGGCAGTGCGATAAGCTaGGAACTTAATGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFGSAIS*ELNVVQ
Trigger: CTGAACAACATTAAGTTCTCAGCTTATCGCACTGCC...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGGGCAGTGCGATAAGCTaGGAACTTAATGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKGSAIS*ELNVVQ
Trigger: CTGAACAACATTAAGTTCTCAGCTTATCGCACTGCC...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATCAGTCAGGCAGTGAATaGCCTCTACCACATCCATCA +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDQSGSE*PLPHPS
Trigger: TGATGGATGTGGTAGAGGTCATTCACTGCCTGACTG...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAAAGGCAGTCAGGCAGTaGATGACCTCTACCACATCC +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTKAVRQ*MTSTTS
Trigger: GGATGTGGTAGAGGTCATTCACTGCCTGACTGCCTT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTATAGAGCACTTGGTCTaGTGCTTCACTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSIEHLV*CFTCSA
Trigger: TGCTGAGCAAGTGAAGCATCAGACCAAGTGCTCTAT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCAGGCAAAAATACCCTTaGCTGGGCAAACGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSRQKYP*LGKRRK
Trigger: CTTCCTGCGTTTGCCCAGTCAAGGGTATTTTTGCCT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000402866.5
CDS-3UTR TCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCGGCAGATGTCAACGTTaGATTGCTTCAGACTCCGGT +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSGRCQR*IASDSG
Trigger: ACCGGAGTCTGAAGCAATTCAACGTTGACATCTGCC...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATGCTGAGGGTGTTTGCTaGAATAATGCTTGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDAEGVC*NNAWSG
Trigger: TCCGCTCCAAGCATTATTTCAGCAAACACCCTCAGC...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTCTAGCTGCTTGTTGTaGTCTTCGAGGATCTGCATG +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSSSCLL*SSRICM
Trigger: CATGCAGATCCTCGAAGATCACAACAAGCAGCTAGA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTACACTGGGGAAGGCATaGCGGAGTTTCTCCATGATG +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSTLGKA*RSFSMM
Trigger: CATCATGGAGAAACTCCGTCATGCCTTCCCCAGTGT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCATCACCTGATTCAGCCTaGGAGCTAGAAGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPSPDSA*ELEGSQ
Trigger: CTGTGACCCTTCTAGCTCTCAGGCTGAATCAGGTGA...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTGTTGCAAATGCCTTATaGTTAGCTGGGGACAATCAG +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFVANAL*LAGDNQ
Trigger: CTGATTGTCCCCAGCTAATCATAAGGCATTTGCAAC...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTTGCCTAAGTGGGCTCTaGATCTATTCAACATTCCCA +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFCLSGL*IYSTFP
Trigger: TGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCA...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGTTAGAATTTAATGTGTaGGTGAGGCCAGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKLEFNV*VRPGEH
Trigger: GTGCTCTCCTGGCCTCACTCACACATTAAATTCTAA...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTTTAGAATTTAATGTGTaGGTGAGGCCAGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFLEFNV*VRPGEH
Trigger: GTGCTCTCCTGGCCTCACTCACACATTAAATTCTAA...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTCTGTTAGATTCTCTGTaGCCACAGGTTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFLLDSL*PQVSVA
Trigger: AGCAACAGAAACCTGTGGTCACAGAGAATCTAACAG...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTGTCCTAACTGTTCTCTaGTACTATTTGACAACAACC +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAVLTVL*YYLTTT
Trigger: GGTTGTTGTCAAATAGTATCAGAGAACAGTTAGGAC...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTAATGCCCAATCAATGTaGATCCACTCTGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFNAQSM*IHSAVT
Trigger: AGTGACAGCAGAGTGGATTCACATTGATTGGGCATT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGAATGCCCAATCAATGTaGATCCACTCTGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKNAQSM*IHSAVT
Trigger: AGTGACAGCAGAGTGGATTCACATTGATTGGGCATT...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTGTCATCTATGTaGAGGGAAATTGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGFLSSM*REIGWD
Trigger: ATCCCATCCAATTTCCCTTCACATAGATGACAGAAA...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTCCAATTTTCATCCTGTaGCCAGTTCTTGTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSPIFIL*PVLVAS
Trigger: GCTGGCTACAAGAACTGGTCACAGGATGAAAATTGG...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTATGGAACTGGTCAGCTaGCTGCCAGTCATGACATCG +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSMELVS*LPVMTS
Trigger: CGATGTCATGACTGGCAGGCAGCTGACCAGTTCCAT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR GCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATTGCTTCGGAGGCTGCTaGTATGATGGAACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHCFGGC*YDGTGQ
Trigger: CTGACCAGTTCCATCATAGCAGCAGCCTCCGAAGCA...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCTCGGGGAGGTATCTTTaGTCTCAGAATGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSSGRYL*SQNEAP
Trigger: AGGAGCCTCATTCTGAGAGCAAAGATACCTCCCCGA...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCGCTGCGACCACTATCAAAAACATTGAGGAGCCAATTGAGGCTCATGTCCACATTAATAGCCTGGATGTaGTCTGGGAGTGAATCAATG +
Preference number: 4 (lower is better)
Translates to: PLRPLSKTLRSQLRLMSTLIAWM*SGSESM
Trigger: CATTGATTCACTCCCAGAGCACATCCAGGCTATTAA...TGTGGACATGAGCCTCAATTGGCTCCTCAATGTTTTTGATAGTGGTCGCAGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGTTAATAGCCTGGATGTaGTCTGGGAGTGAATCAATG +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWLIAWM*SGSESM
Trigger: CATTGATTCACTCCCAGAGCACATCCAGGCTATTAA...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTCCCGCATCTTTCCGCTaGGACCACTATCAAAAACAT +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSPASFR*DHYQKH
Trigger: ATGTTTTTGATAGTGGTCGCAGCGGAAAGATGCGGG...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCTCCAGGAACTGGGATaGTTCAATGACTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSLQELG*FNDWLP
Trigger: GGGAAGCCAGTCATTGAAGCATCCCAGTTCCTGGAG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACCCTTGATGGGGCACTaGCTACAGATAGAGCACTTG +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPPLMGH*LQIEHL
Trigger: CAAGTGCTCTATCTGTAGGCAGTGCCCCATCAAGGG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGCAGCTTATTGCCTTTaGTGGCCCTGCCTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSAAYCL*WPCLSR
Trigger: TCTTGACAGGCAGGGCCAGCAAAGGCAATAAGCTGC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGCAGCTTATTGCCTTTaGTGGCCCTGCCTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTAAYCL*WPCLSR
Trigger: TCTTGACAGGCAGGGCCAGCAAAGGCAATAAGCTGC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTACTGGTCCTCGTCTATaGTGTCATCTGGGGACAAGC +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSTGPRL*CHLGTS
Trigger: GCTTGTCCCCAGATGACAGCATAGACGAGGACCAGT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCATTTCTGTGGCCACACTaGATGGAGCCTGCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPFLWPH*MEPAVQ
Trigger: TTGGACAGCAGGCTCCATGCAGTGTGGCCACAGAAA...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAGTCAGCCAGACTGGGTaGCTCAGCTGCCTCCTCATG +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTVSQTG*LSCLLM
Trigger: CATGAGGAGGCAGCTGAGGCACCCAGTCTGGCTGAC...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATAAAGCAACACTCCCTTaGTCAGCAAGCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDKATLP*SASCHC
Trigger: ACAGTGGCAGCTTGCTGAGCAAGGGAGTGTTGCTTT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTCACACGGTAGCCAGTTaGAAATGCCTTATGATTAGC +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFHTVAS*KCLMIS
Trigger: GCTAATCATAAGGCATTTGCAACTGGCTACCGTGTG...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGCAAATGAAGTCAACTaGAGGGCTCTAGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGANEVN*RALGYK
Trigger: TTTATAACCTAGAGCCCTGCAGTTGACTTCATTTGC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTACCACAGGTTTCTGTTaGTTTGGTCTTGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSTTGFC*FGLEDS
Trigger: GCTGTCCTCAAGACCAAAGCAACAGAAACCTGTGGT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGTACCCACTGGCCCACTaGTGGATTATAATACAACAC +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKYPLAH*WIIIQH
Trigger: GTGTTGTATTATAATCCAGCAGTGGGCCAGTGGGTA...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATGCCCGCCTACCACCTaGTCAACCATCTATCCAGAT +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTCPPTT*STIYPD
Trigger: ATCTGGATAGATGGTTGAGCAGGTGGTAGGCGGGCA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTATTCAACTCTTGACCTaGTGCTTCAGTCCACCTACA +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFIQLLT*CFSPPT
Trigger: TGTAGGTGGACTGAAGCAGCAGGTCAAGAGTTGAAT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCCTCATTTCTGTGTCCTaGCAACCCATTTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSLISVS*QPISWS
Trigger: GCTCCAGGAAATGGGTTGGCAGGACACAGAAATGAG...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATCTCATTTCTGTGTCCTaGCAACCCATTTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDLISVS*QPISWS
Trigger: GCTCCAGGAAATGGGTTGGCAGGACACAGAAATGAG...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAACACAGATTCATGGCTaGTGGTTCCAGGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTTQIHG*WFQGSR
Trigger: TCTGGACCCCTGGAACCACCAGCCATGAATCTGTGT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTAACAGCTTAATAGCCTaGATGTGCTCTGGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFNSLIA*MCSGSE
Trigger: TTCACTCCCAGAGCACATCCAGGCTATTAAGCTGTT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTATCTGTTCCAGGGCCTaGGAATTCTCCATTGACAAG +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSICSRA*EFSIDK
Trigger: CTTGTCAATGGAGAATTCCCAGGCCCTGGAACAGAT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTAAGCGCAGGGCTTTCTaGACTCTGCGGAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSKRRAF*TLRSFM
Trigger: CATGAAACTCCGCAGAGTCCAGAAAGCCCTGCGCTT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGAGATTTCCAGGGCTGTaGTTAAAGTTACCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKRFPGL*LKLPGP
Trigger: TGGACCTGGTAACTTTAACCACAGCCCTGGAAATCT...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCCATCACGTGCTCACTaGCCTGCAGATCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSPSRAH*PADHAH
Trigger: ATGAGCATGATCTGCAGGCCAGTGAGCACGTGATGG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCGGATGCTTCAATGACTaGCTTCCCGGTGCTAAAACG +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSGCFND*LPGAKT
Trigger: CGTTTTAGCACCGGGAAGCCAGTCATTGAAGCATCC...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAACCCACTCCAGGAACTaGGATGCTTCAATGACTGGC +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTTHSRN*DASMTG
Trigger: GCCAGTCATTGAAGCATCCCAGTTCCTGGAGTGGGT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAACCCACTCCAGGAACTaGGATGCTTCAATGACTGGC +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPTHSRN*DASMTG
Trigger: GCCAGTCATTGAAGCATCCCAGTTCCTGGAGTGGGT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAAGCCACACCATGGACTaGGGCTCCAGGTTGACCCAC +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTSHTMD*GSRLTH
Trigger: GTGGGTCAACCTGGAGCCCCAGTCCATGGTGTGGCT...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTGTCAAGAAGCAGGTCTaGCAGATGTCAACGTTGAAT +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFVKKQV*QMSTLN
Trigger: ATTCAACGTTGACATCTGCCAGACCTGCTTCTTGAC...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGGTCAAGAAGCAGGTCTaGCAGATGTCAACGTTGAAT +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKVKKQV*QMSTLN
Trigger: ATTCAACGTTGACATCTGCCAGACCTGCTTCTTGAC...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCTGCCGCAGCAGGTACTaGTCCTCGTCTATGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLCRSRY*SSSMLS
Trigger: TGACAGCATAGACGAGGACCAGTACCTGCTGCGGCA...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCATGCAGCCTCGGTATCTaGAGTAGTCTGTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPCSLGI*SSLSLL
Trigger: GAGAAGGGACAGACTACTCCAGATACCGAGGCTGCA...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACAGAACTTCGCACACTaGGGAAGGCATGACGGAGTT +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTQNFAH*GRHDGV
Trigger: AACTCCGTCATGCCTTCCCCAGTGTGCGAAGTTCTG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCAGAACTTCGCACACTaGGGAAGGCATGACGGAGTT +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSQNFAH*GRHDGV
Trigger: AACTCCGTCATGCCTTCCCCAGTGTGCGAAGTTCTG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGCAAGTGATATTTGCCTaGGCTGCAACAGAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKQVIFA*AATERY
Trigger: GTACCTTTCTGTTGCAGCCCAGGCAAATATCACTTG...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTGCTCCCCATCTGAATaGCCAAGTGATATTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSCSPSE*PSDICL
Trigger: CAGGCAAATATCACTTGGCCATTCAGATGGGGAGCA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTATTCATAATGCTGGATaGAACCTTGGGGTAATTAGG +
Preference number: 4 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFIHNAG*NLGVIR
Trigger: CCTAATTACCCCAAGGTTCCATCCAGCATTATGAAT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATAGCCTGGAAGGGTGTTaGATGGCAGTCATACTACTC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDSLEGC*MAVILL
Trigger: GAGTAGTATGACTGCCATCCAACACCCTTCCAGGCT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACTTTTCTACCATGCCTaGCCCACTGCAGTTGCCACA +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTLFYHA*PTAVAT
Trigger: TGTGGCAACTGCAGTGGGCCAGGCATGGTAGAAAAG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCTTTTCTACCATGCCTaGCCCACTGCAGTTGCCACA +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSLFYHA*PTAVAT
Trigger: TGTGGCAACTGCAGTGGGCCAGGCATGGTAGAAAAG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCCACTCTGCTGTCACTaGAAGCAGAGGTATCCTCGT +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSPLCCH*KQRYPR
Trigger: ACGAGGATACCTCTGCTTCCAGTGACAGCAGAGTGG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACCACTCTGCTGTCACTaGAAGCAGAGGTATCCTCGT +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTPLCCH*KQRYPR
Trigger: ACGAGGATACCTCTGCTTCCAGTGACAGCAGAGTGG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCCTAGCCTTTCTAATCTaGAGGGAAGGGCACATGTCC +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSLAFLI*REGHMS
Trigger: GGACATGTGCCCTTCCCTCCAGATTAGAAAGGCTAG...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGCCCCCTCTCAAATGTaGCAACTGTGGGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSAPSQM*QLWEKM
Trigger: CATCTTCTCCCACAGTTGCCACATTTGAGAGGGGGC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTAAGCACCACAGTGAGTaGCAATCAAAGTTAACCAAT +
Preference number: 4 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAKHHSE*QSKLTN
Trigger: ATTGGTTAACTTTGATTGCCACTCACTGTGGTGCTT...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAAGCACCACAGTGAGTaGCAATCAAAGTTAACCAAT +
Preference number: 4 (lower is better)
Translates to: NESGGKTSPRIGLFLASGKHHSE*QSKLTN
Trigger: ATTGGTTAACTTTGATTGCCACTCACTGTGGTGCTT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCAGGAAGGCCTGAGCTaGCTCCAGCACAGAATAGAT +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLQEGLS*LQHRID
Trigger: ATCTATTCTGTGCTGGAGTCAGCTCAGGCCTTCCTG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATGCAGATCATGCTCATTaGAGATTTCCAGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHADHAH*RFPGLW
Trigger: CCACAGCCCTGGAAATCTTCAATGAGCATGATCTGC...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTAGTTGGCCACTTGGCTaGAGAGGTACTGAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSSWPLG*RGTEVF
Trigger: AAAAACTTCAGTACCTCTTCAGCCAAGTGGCCAACT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGGCAGATGTCAACGTTaGATTGCTTCAGACTCCGGT +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSGRCQR*IASDSG
Trigger: ACCGGAGTCTGAAGCAATTCAACGTTGACATCTGCC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTAAGAAGGAGCAATTTTaGCTTTCCATCTCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFKKEQF*LSISAS
Trigger: GCTTGCTGAGATGGAAAGTCAAAATTGCTCCTTCTT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACACCTCCAAGCACAGGCTaGCATCCTGGCTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTPPSTG*HPGSLT
Trigger: GGTCAAAGAGCCAGGATGTCAGCCTGTGCTTGGAGG...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAACCCTTTTGCCTCCCTaGGTTGCGCCAGAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTTLLPP*VAPESR
Trigger: CCTACTCTCTGGCGCAACTCAGGGAGGCAAAAGGGT...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTATACTACTCCAGACTTaGGGTGGGCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSILLQT*GGLPLP
Trigger: AGGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTAT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAAAGTGGCCAGCTTCCTaGTTTGTGGCCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTKWPAS*FVACGS
Trigger: GGAGCCACAGGCCACAAATCAGGAAGCTGGCCACTT...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCGCAGATGTTATGCTGTaGAGTCTGACACCCTGGACC +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLADVML*SLTPWT
Trigger: GGTCCAGGGTGTCAGACTTCACAGCATAACATCTGC...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACACCCAGGTTCTATGATTaGTGCCCGCCTACCACCTGC +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTPRFYD*CPPTTC
Trigger: GCAGGTGGTAGGCGGGCATCAATCATAGAACCTGGG...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCAATATGCTCCCACTCTaGCTGATGCCCAGGTTCTAT +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSNMLPL*LMPRFY
Trigger: ATAGAACCTGGGCATCAGTCAGAGTGGGAGCATATT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCAAGCATAGCACAGCCTaGTGTCCTCCAGCTAGTCAG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLKHSTA*CPPASQ
Trigger: CTGACTAGCTGGAGGACATCAGGCTGTGCTATGCTT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATAGTCTTAAAAGACAATaGCCGCATCTTTCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDSLKRQ*PHLSAA
Trigger: CGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATTTTCCTTCACTTCCGTaGCACACAAGCATGCAATGC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDFPSLP*HTSMQC
Trigger: GCATTGCATGCTTGTGTGGCACGGAAGTGAAGGAAA...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCTCCAGGAACTGGGATaGTTCAATGACTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLLQELG*FNDWLP
Trigger: GGGAAGCCAGTCATTGAAGCATCCCAGTTCCTGGAG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCCCATCTCAGCAAGCCTaGTGGCAAAATGCTCAATTC +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSPSQQA*WQNAQF
Trigger: GAATTGAGCATTTTGCCAGCAGGCTTGCTGAGATGG...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAACACTGCATGGAGCCTaGTGTCCAAAGGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTTLHGA*CPKAGS
Trigger: GGAGCCAGCCTTTGGACAGCAGGCTCCATGCAGTGT...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCTTTCTGTGGCCACACTaGATGGAGCCTGCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLFLWPH*MEPAVQ
Trigger: TTGGACAGCAGGCTCCATGCAGTGTGGCCACAGAAA...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTGTAGCCAGTTGCAAATaGCTTATGATTAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSVASCK*LMISWG
Trigger: TCCCCAGCTAATCATAAGGCATTTGCAACTGGCTAC...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGGCAAATGAAGTCAACTaGAGGGCTCTAGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKANEVN*RALGYK
Trigger: TTTATAACCTAGAGCCCTGCAGTTGACTTCATTTGC...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATACCACAGGTTTCTGTTaGTTTGGTCTTGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDTTGFC*FGLEDS
Trigger: GCTGTCCTCAAGACCAAAGCAACAGAAACCTGTGGT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATGGCAGAGCTTGGGTTTaGTCTATTTTGGCACCTGAA +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDGRAWV*SILAPE
Trigger: TTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGCC...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCTGTTTGTCCTTTTCTaGATGGGGTGGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSLFVLF*MGWAEL
Trigger: AAGCTCTGCCCACCCCATGCAGAAAAGGACAAACAG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAACATCTTTTCTACCATaGCTGGCCCACTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTTSFLP*LAHCSC
Trigger: GCAACTGCAGTGGGCCAGGCATGGTAGAAAAGATGT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATAATGTGAATCCACTCTaGTGTCACTGGAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDNVNPL*CHWKQR
Trigger: CCTCTGCTTCCAGTGACAGCAGAGTGGATTCACATT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGAGGCAGCTACTTTCTTaGTTTTCTGTCATCTATGTG +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWRQLLS*FSVIYV
Trigger: CACATAGATGACAGAAAAGCAAGAAAGTAGCTGCCT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTAACTCCTCATCCTTTTaGCTGAGCCAGTCAATAATC +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFNSSSF*LSQSII
Trigger: GATTATTGACTGGCTCAGCCAAAAGGATGAGGAGTT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATGAAATGGCAAGTTGGTaGGCCAGATCATTCACCAAC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDEMASW*ARSFTN
Trigger: GTTGGTGAATGATCTGGCCCACCAACTTGCCATTTC...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCGAAATGGCAAGTTGGTaGGCCAGATCATTCACCAAC +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSEMASW*ARSFTN
Trigger: GTTGGTGAATGATCTGGCCCACCAACTTGCCATTTC...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCGCTGCGACCACTATCAAAAACATTGAGGAGCCAATTGAGGCTCATGTCCACAAGTAGGGAACTTTATTaGGTGAAATTGCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PLRPLSKTLRSQLRLMSTSRELY*VKLLFP
Trigger: GGGAAAGAGCAATTTCACCCAATAAAGTTCCCTACT...TGTGGACATGAGCCTCAATTGGCTCCTCAATGTTTTTGATAGTGGTCGCAGCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCAAGCGCAGGGCTTTCTaGACTCTGCGGAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLKRRAF*TLRSFM
Trigger: CATGAAACTCCGCAGAGTCCAGAAAGCCCTGCGCTT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCCCCTCATGTTCTCACTaGATGTGGTCGGTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSPSCSH*MWSVCN
Trigger: ATTACACACCGACCACATCCAGTGAGAACATGAGGG...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGATTCATAATGCTGGATaGAACCTTGGGGTAATTAGG +
Preference number: 4 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWIHNAG*NLGVIR
Trigger: CCTAATTACCCCAAGGTTCCATCCAGCATTATGAAT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATTGGAAGGGTGTTGGATaGCAGTCATACTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDWKGVG*QSYYSR
Trigger: TCTGGAGTAGTATGACTGCCATCCAACACCCTTCCA...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCCACTGGCCCACTGCTaGATTATAATACAACACCCC +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSPLAHC*IIIQHP
Trigger: GGGGTGTTGTATTATAATCCAGCAGTGGGCCAGTGG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACCAAGAGCTCTCAGGTaGGGTGGGGATAACAGAAAA +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTPRALR*GGDNRK
Trigger: TTTTCTGTTATCCCCACCCCACCTGAGAGCTCTTGG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGAATCCAACCCCAAGTTaGATTCATAGTACCCAAGGA +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKNPTPS*IHSTQG
Trigger: TCCTTGGGTACTATGAATCCAACTTGGGGTTGGATT...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACTAGCCTTTCTAATCTaGAGGGAAGGGCACATGTCC +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTLAFLI*REGHMS
Trigger: GGACATGTGCCCTTCCCTCCAGATTAGAAAGGCTAG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGGATTGGCCTCTTCCTaGCCTCAGGGTTTCTCATTT +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTGLASS*PQGFSF
Trigger: AAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACAAATGTGGCAACTGTaGGAGAAGATGGACTCTGCG +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTQMWQL*EKMDSA
Trigger: CGCAGAGTCCATCTTCTCCCACAGTTGCCACATTTG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAAATGTGGCAACTGTaGGAGAAGATGGACTCTGCG +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPQMWQL*EKMDSA
Trigger: CGCAGAGTCCATCTTCTCCCACAGTTGCCACATTTG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 72 bp AGAGTTAGAAATAACAATTTTAGGCACAGGAAGGCCTaGCTGTTGTTGTCTGGGTGGAAAGTGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RVRNNNFRHRKA*LLLSGWKVASF
Trigger: GAAGCTGGCCACTTTCCACCCAGACAACAACAGCAAGGCCTTCCTGTGCCTAAAATTGTTATTTCTAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 72 bp CAAAATGTCAGTGACCCCTTAGTGAGAATTCAACTCTaGACCTGCTGCTTCAGTCCACCTACAACGCAAATC +
Preference number: 4 (lower is better)
Translates to: QNVSDPLVRIQL*TCCFSPPTTQI
Trigger: GATTTGCGTTGTAGGTGGACTGAAGCAGCAGGTCAAGAGTTGAATTCTCACTAAGGGGTCACTGACATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACATCCTCCATTGCCCCTTaGATCTCCAAGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTSSIAP*ISKSCS
Trigger: GGAGCAGCTCTTGGAGATTCAAGGGGCAATGGAGGA...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATGGCAGTGCGATAAGCTaGGAACTTAATGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDGSAIS*ELNVVQ
Trigger: CTGAACAACATTAAGTTCTCAGCTTATCGCACTGCC...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACACACAGAGTGGCACGTTaGCCAGGATGCCTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTHRVAR*PGCLFP
Trigger: AGGAAAGAGGCATCCTGGTCAACGTGCCACTCTGTG...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATAGTTGGCCACTTGGCTaGAGAGGTACTGAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDSWPLG*RGTEVF
Trigger: AAAAACTTCAGTACCTCTTCAGCCAAGTGGCCAACT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTAAGAAGGAGCAATTTTaGCTTTCCATCTCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSKKEQF*LSISAS
Trigger: GCTTGCTGAGATGGAAAGTCAAAATTGCTCCTTCTT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATCTAGCTGCTTGTTGTaGTCTTCGAGGATCTGCATG +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTSSCLL*SSRICM
Trigger: CATGCAGATCCTCGAAGATCACAACAAGCAGCTAGA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCATCTAGCTGCTTGTTGTaGTCTTCGAGGATCTGCATG +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPSSCLL*SSRICM
Trigger: CATGCAGATCCTCGAAGATCACAACAAGCAGCTAGA...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAACCAGGAGAGGACTATaGACTATAGGATGGGGATCT +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTTRRGL*TIGWGS
Trigger: AGATCCCCATCCTATAGTTCATAGTCCTCTCCTGGT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCGTAGAAGAACCAGAATaGACTGTTCTCCCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSVEEPE*TVLPLR
Trigger: CCTTAAGGGGAGAACAGTTCATTCTGGTTCTTCTAC...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTTTCTTTAGCCCTGAGTaGGACCATAAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSFFSPE*DHKSWK
Trigger: CTTCCAGCTCTTATGGTCTCACTCAGGGCTAAAGAA...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTGTCCTAACTGTTCTCTaGTACTATTTGACAACAACC +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFVLTVL*YYLTTT
Trigger: GGTTGTTGTCAAATAGTATCAGAGAACAGTTAGGAC...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCTAGTCAGCCTTCCGTaGCAATGCCCAATCAATGTG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLLVSLP*QCPINV
Trigger: CACATTGATTGGGCATTGTCACGGAAGGCTGACTAG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATGGGATTTTTGGCCTTaGAATGGTGCCACAGACCAT +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTWDFWP*NGATDH
Trigger: ATGGTCTGTGGCACCATTTCAAGGCCAAAAATCCCA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTTTTCTGTCATCTATGTaGAGGGAAATTGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFFLSSM*REIGWD
Trigger: ATCCCATCCAATTTCCCTTCACATAGATGACAGAAA...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGGGAAAGCACCACAGTaGGTGGCAATCAAAGTTAAC +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTGKAPQ*VAIKVN
Trigger: GTTAACTTTGATTGCCACTCACTGTGGTGCTTTCCC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTTGCATGACCATAGGTTaGATAAAAACCAAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFCMTIG*IKTKAH
Trigger: ATGAGCCTTGGTTTTTATGCAACCTATGGTCATGCA...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR GCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTTAATAGCCTGGATGTaGTCTGGGAGTGAATCAATG +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSLIAWM*SGSESM
Trigger: CATTGATTCACTCCCAGAGCACATCCAGGCTATTAA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCACGTGCTCACTGGCCTaGAGATCATGCTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLTCSLA*RSCSLK
Trigger: CTTCAATGAGCATGATCTGCAGGCCAGTGAGCACGT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATAGTCTTAAAAGACAATaGCCGCATCTTTCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHSLKRQ*PHLSAA
Trigger: CGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACT...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATATGTCAACGTTGAATTaGTTCAGACTCCGGTACCTG +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDMSTLN*FRLRYL
Trigger: CAGGTACCGGAGTCTGAAGCAATTCAACGTTGACAT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCAGCCTGCTGGCAAAATaGTCAATTCGGGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLSLLAK*SIRECV
Trigger: CACACACTCCCGAATTGAGCATTTTGCCAGCAGGCT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAATACCACCAGATCCCTaGTGCTGCCCAGAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTIPPDP*CCPEPK
Trigger: TTTGGGCTCTGGGCAGCAGCAGGGATCTGGTGGTAT...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACACCATCACTGCCCGCATaGACCTCACATACCACCAGA +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTPSLPA*TSHTTR
Trigger: TCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGG...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACACCCTTCTCCCATCACTaGCCGCATGCACCTCACATA +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTPFSHH*PHAPHI
Trigger: TATGTGAGGTGCATGCGGGCAGTGATGGGAGAAGGG...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCATGGCCAAGTGATATTTaGCTGGGCTGCAACAGAAAG +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPWPSDI*LGCNRK
Trigger: CTTTCTGTTGCAGCCCAGGCAAATATCACTTGGCCA...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTTGGCCAAGTGATATTTaGCTGGGCTGCAACAGAAAG +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSWPSDI*LGCNRK
Trigger: CTTTCTGTTGCAGCCCAGGCAAATATCACTTGGCCA...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCAAAGCAACACTCCCTTaGTCAGCAAGCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLKATLP*SASCHC
Trigger: ACAGTGGCAGCTTGCTGAGCAAGGGAGTGTTGCTTT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATCACACGGTAGCCAGTTaGAAATGCCTTATGATTAGC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDHTVAS*KCLMIS
Trigger: GCTAATCATAAGGCATTTGCAACTGGCTACCGTGTG...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATTACCCACTGGCCCACTaGTGGATTATAATACAACAC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDYPLAH*WIIIQH
Trigger: GTGTTGTATTATAATCCAGCAGTGGGCCAGTGGGTA...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCAACTCTTGACCTGCTaGTTCAGTCCACCTACAACG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLQLLTC*FSPPTT
Trigger: CGTTGTAGGTGGACTGAAGCAGCAGGTCAAGAGTTG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGAACTACACAGTGCCATaGACAATATCCTTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKNYTVP*TISLED
Trigger: GTCTTCTAAGGATATTGTGCATGGCACTGTGTAGTT...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTAACTCCTCATCCTTTTaGCTGAGCCAGTCAATAATC +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSNSSSF*LSQSII
Trigger: GATTATTGACTGGCTCAGCCAAAAGGATGAGGAGTT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATTCAGAAATGGCAAGTTaGTGGGCCAGATCATTCACC +
Preference number: 4 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHSEMAS*WARSFT
Trigger: GGTGAATGATCTGGCCCACCAACTTGCCATTTCTGA...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATCCAGCTCACGACAGTTaGCTGTTAAAATTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHPAHDS*LLKFQG
Trigger: CCCCTGAAATTTTAACAGCCAACTGTCGTGAGCTGG...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATCACAGGTATATACTGTaGTGTGCTGATGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHHRYIL*CADASS
Trigger: TGAGCTGGCATCAGCACACCACAGTATATACCTGTG...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACACGCCTCAGCTCTCCCTaGAGAATCCGGTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTRLSSP*RIRFSS
Trigger: AGATGAGAACCGGATTCTCCAGGGAGAGCTGAGGCG...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTTGCTCCCCATCTGAATaGCCAAGTGATATTTGCCTG +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSCSPSE*PSDICL
Trigger: CAGGCAAATATCACTTGGCCATTCAGATGGGGAGCA...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCAGCCTGGAAGGGTGTTaGATGGCAGTCATACTACTC +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLSLEGC*MAVILL
Trigger: GAGTAGTATGACTGCCATCCAACACCCTTCCAGGCT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGGTTCAGTTTGAGGATTaGATTCACCTTCCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKVQFED*IHLPEL
Trigger: TAACTCTGGAAGGTGAATCCAATCCTCAAACTGAAC...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTAGAAAGCTGCCTAAGTaGGCTCTGAATCTATTCAAC +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSRKLPK*ALNLFN
Trigger: GTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTAATCCAACCCCAAGTTaGATTCATAGTACCCAAGGA +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSNPTPS*IHSTQG
Trigger: TCCTTGGGTACTATGAATCCAACTTGGGGTTGGATT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATGGCAGTGCGATAAGCTaGGAACTTAATGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHGSAIS*ELNVVQ
Trigger: CTGAACAACATTAAGTTCTCAGCTTATCGCACTGCC...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCATAGAGCACTTGGTCTaGTGCTTCACTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLIEHLV*CFTCSA
Trigger: TGCTGAGCAAGTGAAGCATCAGACCAAGTGCTCTAT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGTGTGTAATACTCCATaGTGGGGTAGTGCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSVCNTP*WGSAAY
Trigger: ATAAGCTGCACTACCCCATCATGGAGTATTACACAC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAGTGTGTAATACTCCATaGTGGGGTAGTGCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPVCNTP*WGSAAY
Trigger: ATAAGCTGCACTACCCCATCATGGAGTATTACACAC...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGTGTGTAATACTCCATaGTGGGGTAGTGCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTVCNTP*WGSAAY
Trigger: ATAAGCTGCACTACCCCATCATGGAGTATTACACAC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCTTCTTTAGCCCTGAGTaGGACCATAAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLFFSPE*DHKSWK
Trigger: CTTCCAGCTCTTATGGTCTCACTCAGGGCTAAAGAA...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAAATGCCCAATCAATGTaGATCCACTCTGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTNAQSM*IHSAVT
Trigger: AGTGACAGCAGAGTGGATTCACATTGATTGGGCATT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAAAGCATAGCACAGCCTaGTGTCCTCCAGCTAGTCAG +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTKHSTA*CPPASQ
Trigger: CTGACTAGCTGGAGGACATCAGGCTGTGCTATGCTT...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACACGGGAACCACCCAGCTaGAGAATTAAGTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTREPPS*RIKSPQ
Trigger: CTGTGGAGACTTAATTCTTCAGCTGGGTGGTTCCCG...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCTGGCCTGCAGATCATaGTCATTGAAGATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLLACRS*SLKISR
Trigger: CCTGGAAATCTTCAATGAGCATGATCTGCAGGCCAG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACACTCCAGGAACTGGGATaGTTCAATGACTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTLQELG*FNDWLP
Trigger: GGGAAGCCAGTCATTGAAGCATCCCAGTTCCTGGAG...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACACCCTTGATGGGGCACTaGCTACAGATAGAGCACTTG +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTPLMGH*LQIEHL
Trigger: CAAGTGCTCTATCTGTAGGCAGTGCCCCATCAAGGG...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAGCAGCTTATTGCCTTTaGTGGCCCTGCCTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTAAYCL*WPCLSR
Trigger: TCTTGACAGGCAGGGCCAGCAAAGGCAATAAGCTGC...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCCATCTCAGCAAGCCTaGTGGCAAAATGCTCAATTC +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLPSQQA*WQNAQF
Trigger: GAATTGAGCATTTTGCCAGCAGGCTTGCTGAGATGG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGTAGCCAGTTGCAAATaGCTTATGATTAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSVASCK*LMISWG
Trigger: TCCCCAGCTAATCATAAGGCATTTGCAACTGGCTAC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACACGGTAGCCAGTTaGAAATGCCTTATGATTAGC +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPHTVAS*KCLMIS
Trigger: GCTAATCATAAGGCATTTGCAACTGGCTACCGTGTG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCACCACAGGTTTCTGTTaGTTTGGTCTTGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLTTGFC*FGLEDS
Trigger: GCTGTCCTCAAGACCAAAGCAACAGAAACCTGTGGT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCATACCCACTGGCCCACTaGTGGATTATAATACAACAC +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPYPLAH*WIIIQH
Trigger: GTGTTGTATTATAATCCAGCAGTGGGCCAGTGGGTA...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTATTCAACTCTTGACCTaGTGCTTCAGTCCACCTACA +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSIQLLT*CFSPPT
Trigger: TGTAGGTGGACTGAAGCAGCAGGTCAAGAGTTGAAT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACATCCAACACAGATTCATaGCTGGTGGTTCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTSNTDS*LVVPGV
Trigger: GACCCCTGGAACCACCAGCCATGAATCTGTGTTGGA...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAAACAGCTTAATAGCCTaGATGTGCTCTGGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPNSLIA*MCSGSE
Trigger: TTCACTCCCAGAGCACATCCAGGCTATTAAGCTGTT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATAAGTGGAGTCCAGTTTaGTTCACGTACAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHKWSPV*FTYRRE
Trigger: TTCTCTCCTGTACGTGAACCAAACTGGACTCCACTT...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCAAACTACCAGAGATGTaGCGGCTCTTGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLKLPEM*RLLEMS
Trigger: TGACATCTCCAAGAGCCGCCACATCTCTGGTAGTTT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000402866.5
CDS-3UTR CCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCTGCTCCCCATCTGAATaGCCAAGTGATATTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLCSPSE*PSDICL
Trigger: CAGGCAAATATCACTTGGCCATTCAGATGGGGAGCA...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACACAGCTTCCTGATTTGTaGCCTGTGGCTCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTQLPDL*PVAPME
Trigger: CTCCATAGGAGCCACAGGCCACAAATCAGGAAGCTG...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACACTGTTGTTGTCTGGGTaGAAAGTGGCCAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTLLLSG*KVASFL
Trigger: CAGGAAGCTGGCCACTTTCCACCCAGACAACAACAG...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTGGATAAAGAGATCATaGTATATGTCGCCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSWIKRS*YMSPRK
Trigger: CTTCCTAGGCGACATATACCATGATCTCTTTATCCA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGGGTTTGCTCTATTTTaGCACCTGAACCATTTAGGG +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSGFALF*HLNHLG
Trigger: CCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAGGGGTGGGCAGAGCTTaGGTTTGCTCTATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTGVGRA*VCSILA
Trigger: TGCCAAAATAGAGCAAACCCAAGCTCTGCCCACCCC...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACACTTTTCTGCATGGGGTaGGCAGAGCTTGGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTLFCMG*AELGFA
Trigger: AGCAAACCCAAGCTCTGCCCACCCCATGCAGAAAAG...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCTGCCAACCCATTTCCTaGAGCACCAGAAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLCQPIS*STRNSN
Trigger: GTTTGAGTTTCTGGTGCTCCAGGAAATGGGTTGGCA...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 72 bp TGTCACTGGAAGCAGAGGTATCCTCGTAATGGCTTTTaGGCCTCTATCAAATTCTGTCAAGAAGAAATCACC +
Preference number: 4 (lower is better)
Translates to: CHWKQRYPRNGF*ASIKFCQEEIT
Trigger: GGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAGGATACCTCTGCTTCCAGTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACACAGTCAGGCAGTGAATaGCCTCTACCACATCCATCA +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTQSGSE*PLPHPS
Trigger: TGATGGATGTGGTAGAGGTCATTCACTGCCTGACTG...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCGTAGAAGAACCAGAATaGACTGTTCTCCCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLVEEPE*TVLPLR
Trigger: CCTTAAGGGGAGAACAGTTCATTCTGGTTCTTCTAC...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTATAAACTTAGGCAAATaGAGTCAACTGCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSINLGK*SQLQGS
Trigger: AGAGCCCTGCAGTTGACTTCATTTGCCTAAGTTTAT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAATAAACTTAGGCAAATaGAGTCAACTGCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPINLGK*SQLQGS
Trigger: AGAGCCCTGCAGTTGACTTCATTTGCCTAAGTTTAT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAACCACAAAATGTCAGTaGCCCCTTAGTGAGAATTCA +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPTTKCQ*PLSENS
Trigger: TGAATTCTCACTAAGGGGTCACTGACATTTTGTGGT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATTTCTCTGATACTATTTaGCAACAACCCCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDFSDTI*QQPQQM
Trigger: CATTTGCTGGGGTTGTTGTCAAATAGTATCAGAGAA...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCGTCCTAACTGTTCTCTaGTACTATTTGACAACAACC +
Preference number: 4 (lower is better)
Translates to: TSMERDILGEQPGYIYLSVLTVL*YYLTTT
Trigger: GGTTGTTGTCAAATAGTATCAGAGAACAGTTAGGAC...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATAACAACCCCAGCAAATaGTCACATTCCTTATCATTG +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDNNPSK*SHSLSL
Trigger: CAATGATAAGGAATGTGAGCATTTGCTGGGGTTGTT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAAGAGCTGCTCTGTGTTaGTATGCAATCATATCACCA +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTRAALC*YAIISP
Trigger: TGGTGATATGATTGCATAGCAACACAGAGCAGCTCT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395209.8
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTAACTCCTCATCCTTTTaGCTGAGCCAGTCAATAATC +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSNSSSF*LSQSII
Trigger: GATTATTGACTGGCTCAGCCAAAAGGATGAGGAGTT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAAGATGTGGCGGCTCTTaGAGATGTCAATTCATTAGA +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTRCGGS*RCQFIR
Trigger: TCTAATGAATTGACATCTCCAAGAGCCGCCACATCT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000402866.5
CDS-3UTR CCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAGTCTATGCTGTCATCTaGGGACAAGCTGTCATTAAA +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPVYAVI*GQAVIK
Trigger: TTTAATGACAGCTTGTCCCCAGATGACAGCATAGAC...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGTCTATGCTGTCATCTaGGGACAAGCTGTCATTAAA +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSVYAVI*GQAVIK
Trigger: TTTAATGACAGCTTGTCCCCAGATGACAGCATAGAC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATCTCGTAATGGCTTTTTaGCCTCTATCAAATTCTGTC +
Preference number: 4 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDLVMAF*PLSNSV
Trigger: GACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAGGGAACTTTATTGGGTaGAATTGCTCTTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTGNFIG*NCSFPG
Trigger: CCCTGGGAAAGAGCAATTTCACCCAATAAAGTTCCC...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCATAAACTTAGGCAAATaGAGTCAACTGCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLINLGK*SQLQGS
Trigger: AGAGCCCTGCAGTTGACTTCATTTGCCTAAGTTTAT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACATGCCCAGAGACCTCATaGACACTAAGGCAGATGTTA +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTCPETS*TLRQML
Trigger: TAACATCTGCCTTAGTGTTCATGAGGTCTCTGGGCA...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR TCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCATTTCTGTCATCTATGTaGAGGGAAATTGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPFLSSM*REIGWD
Trigger: ATCCCATCCAATTTCCCTTCACATAGATGACAGAAA...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCATGCATGACCATAGGTTaGATAAAAACCAAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPCMTIG*IKTKAH
Trigger: ATGAGCCTTGGTTTTTATGCAACCTATGGTCATGCA...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR GCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACACCCGCATCTTTCCGCTaGGACCACTATCAAAAACAT +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTPASFR*DHYQKH
Trigger: ATGTTTTTGATAGTGGTCGCAGCGGAAAGATGCGGG...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGCAAATGAAGTCAACTaGAGGGCTCTAGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTANEVN*RALGYK
Trigger: TTTATAACCTAGAGCCCTGCAGTTGACTTCATTTGC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAGCAAATGAAGTCAACTaGAGGGCTCTAGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPANEVN*RALGYK
Trigger: TTTATAACCTAGAGCCCTGCAGTTGACTTCATTTGC...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAAACAACCCCAGCAAATaGTCACATTCCTTATCATTG +
Preference number: 4 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPNNPSK*SHSLSL
Trigger: CAATGATAAGGAATGTGAGCATTTGCTGGGGTTGTT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAGAAATGGCAAGTTGGTaGGCCAGATCATTCACCAAC +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTEMASW*ARSFTN
Trigger: GTTGGTGAATGATCTGGCCCACCAACTTGCCATTTC...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAAGTGCACATCAGAAATaGCAAGTTGGTGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTSAHQK*QVGGPD
Trigger: ATCTGGCCCACCAACTTGCCATTTCTGATGTGCACT...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTAGTAGGGAACTTTATTaGGTGAAATTGCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSSRELY*VKLLFP
Trigger: GGGAAAGAGCAATTTCACCCAATAAAGTTCCCTACT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTTGTTCTTTAAGGTTGTaGCAAAGTCCCTCATGTTCT +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSCSLRL*QSPSCS
Trigger: AGAACATGAGGGACTTTGCCACAACCTTAAAGAACA...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATGTTCTTTAAGGTTGTaGCAAAGTCCCTCATGTTCT +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTCSLRL*QSPSCS
Trigger: AGAACATGAGGGACTTTGCCACAACCTTAAAGAACA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATGGATAAAGAGATCATaGTATATGTCGCCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTWIKRS*YMSPRK
Trigger: CTTCCTAGGCGACATATACCATGATCTCTTTATCCA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTTGGATAAAGAGATCATaGTATATGTCGCCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSWIKRS*YMSPRK
Trigger: CTTCCTAGGCGACATATACCATGATCTCTTTATCCA...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCAGAAAGCTGCCTAAGTaGGCTCTGAATCTATTCAAC +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLRKLPK*ALNLFN
Trigger: GTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACCATTTACCTTACTGTaGGAAAATTCCCCACACATA +
Preference number: 4 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTPFTLL*ENSPHI
Trigger: TATGTGTGGGGAATTTTCCCACAGTAAGGTAAATGG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCTCGTAATGGCTTTTTaGCCTCTATCAAATTCTGTC +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSLVMAF*PLSNSV
Trigger: GACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTTATGTGAAGGGAAATTaGATGGGATTTTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSYVKGN*MGFLAL
Trigger: CAAGGCCAAAAATCCCATCCAATTTCCCTTCACATA...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCAACTACACAGTGCCATaGACAATATCCTTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLNYTVP*TISLED
Trigger: GTCTTCTAAGGATATTGTGCATGGCACTGTGTAGTT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCAACAACCCCAGCAAATaGTCACATTCCTTATCATTG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLNNPSK*SHSLSL
Trigger: CAATGATAAGGAATGTGAGCATTTGCTGGGGTTGTT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCAGGCAGCTACTTTCTTaGTTTTCTGTCATCTATGTG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLRQLLS*FSVIYV
Trigger: CACATAGATGACAGAAAAGCAAGAAAGTAGCTGCCT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAGTCAAGAAGCAGGTCTaGCAGATGTCAACGTTGAAT +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTVKKQV*QMSTLN
Trigger: ATTCAACGTTGACATCTGCCAGACCTGCTTCTTGAC...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCTATGTGAAGGGAAATTaGATGGGATTTTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLYVKGN*MGFLAL
Trigger: CAAGGCCAAAAATCCCATCCAATTTCCCTTCACATA...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 72 bp TTTCCCAGAACTGTTCGAGTTAAGGCAGCTACTTTCTaGCTTTTCTGTCATCTATGTGAAGGGAAATTGGAT +
Preference number: 4 (lower is better)
Translates to: FPRTVRVKAATF*LFCHLCEGKLD
Trigger: ATCCAATTTCCCTTCACATAGATGACAGAAAAGCAAGAAAGTAGCTGCCTTAACTCGAACAGTTCTGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATACAGAAATTAGCAAATaGTACAGATCAGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHTEISK*YRSAFL
Trigger: AAGGAAAGCTGATCTGTAGCATTTGCTAATTTCTGT...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR TCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACATTCTCTGATACTATTTaGCAACAACCCCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTFSDTI*QQPQQM
Trigger: CATTTGCTGGGGTTGTTGTCAAATAGTATCAGAGAA...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR GCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACATGCATGACCATAGGTTaGATAAAAACCAAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTCMTIG*IKTKAH
Trigger: ATGAGCCTTGGTTTTTATGCAACCTATGGTCATGCA...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR GCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAAGGCAGCTACTTTCTTaGTTTTCTGTCATCTATGTG +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTRQLLS*FSVIYV
Trigger: CACATAGATGACAGAAAAGCAAGAAAGTAGCTGCCT...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CCA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACATGTTCTTTAAGGTTGTaGCAAAGTCCCTCATGTTCT +
Preference number: 4 (lower is better)
Translates to: QFEDWIHLPELEITILGTCSLRL*QSPSCS
Trigger: AGAACATGAGGGACTTTGCCACAACCTTAAAGAACA...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
3UTR CAA 72 bp ATACACAACAAGATGTCTAACAACATACAACACATTTaGGTAAATCCAACCCCAAGTTGGATTCATAGTACC +
Preference number: 4 (lower is better)
Translates to: IHNKMSNNIQHI*VNPTPSWIHST
Trigger: GGTACTATGAATCCAACTTGGGGTTGGATTTACCAAAATGTGTTGTATGTTGTTAGACATCTTGTTGTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 90 bp GCGGTGGTCTGTTGCTGCCTCAGTGGAGCCGTCAGCCAGACTGGGTaGCTCAGCTGCCTCCTCATGCTGCCACTTCAGGCGCCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: AVVCCCLSGAVSQTG*LSCLLMLPLQAPQL
Trigger: GAGCTGAGGCGCCTGAAGTGGCAGCATGAGGAGGCAGCTGAGGCACCCAGTCTGGCTGACGGCTCCACTGAGGCAGCAACAGACCACCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 90 bp GATACGGGCCTCGGCCAGAAGCTCCTCATTGCGGTGGTCTGTTGCTaGCTCAGTGGAGCCGTCAGCCAGACTGGGTGCCTCAGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: DTGLGQKLLIAVVCC*LSGAVSQTGCLSCL
Trigger: GAGGCAGCTGAGGCACCCAGTCTGGCTGACGGCTCCACTGAGGCAGCAACAGACCACCGCAATGAGGAGCTTCTGGCCGAGGCCCGTATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 90 bp GCCTGCTGTCCAAAGGCTGGCTCCCGGTCTGTGATGGGGCTGGAGTaGCGCAGCAGGTACTGGTCCTCGTCTATGCTGTCATCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: ACCPKAGSRSVMGLE*RSRYWSSSMLSSGD
Trigger: GTCCCCAGATGACAGCATAGACGAGGACCAGTACCTGCTGCGGCACTCCAGCCCCATCACAGACCGGGAGCCAGCCTTTGGACAGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 90 bp GTGGAGCCGTCAGCCAGACTGGGTGCCTCAGCTGCCTCCTCATGCTaGCACTTCAGGCGCCTCAGCTCTCCCTGGAGAATCCGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: VEPSARLGASAASSC*HFRRLSSPWRIRFS
Trigger: TGAGAACCGGATTCTCCAGGGAGAGCTGAGGCGCCTGAAGTGGCAGCATGAGGAGGCAGCTGAGGCACCCAGTCTGGCTGACGGCTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 90 bp AAGGATACGGGCCTCGGCCAGAAGCTCCTCATTGCGGTGGTCTGTTaGTGCCTCAGTGGAGCCGTCAGCCAGACTGGGTGCCTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KDTGLGQKLLIAVVC*CLSGAVSQTGCLSC
Trigger: GCAGCTGAGGCACCCAGTCTGGCTGACGGCTCCACTGAGGCAGCAACAGACCACCGCAATGAGGAGCTTCTGGCCGAGGCCCGTATCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CCA 90 bp CCTCGGCCAGAAGCTCCTCATTGCGGTGGTCTGTTGCTGCCTCAGTaGAGCCGTCAGCCAGACTGGGTGCCTCAGCTGCCTCCTCATGCT +
Preference number: 5 (lower is better)
Translates to: PRPEAPHCGGLLLPQ*SRQPDWVPQLPPHA
Trigger: AGCATGAGGAGGCAGCTGAGGCACCCAGTCTGGCTGACGGCTCCACTGAGGCAGCAACAGACCACCGCAATGAGGAGCTTCTGGCCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CCA 90 bp TGTTGCCGAAGGATACGGGCCTCGGCCAGAAGCTCCTCATTGCGGTaGTCTGTTGCTGCCTCAGTGGAGCCGTCAGCCAGACTGGGTGCC +
Preference number: 5 (lower is better)
Translates to: CCRRIRASARSSSLR*SVAASVEPSARLGA
Trigger: GGCACCCAGTCTGGCTGACGGCTCCACTGAGGCAGCAACAGACCACCGCAATGAGGAGCTTCTGGCCGAGGCCCGTATCCTTCGGCAACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 90 bp GGGGCAGGTGCTTCGGAGGCTGCTGCTATGATGGAACTGGTCAGCTaGCTGCCAGTCATGACATCGTGGGAGGGTGTAAGGGCATCCCTG +
Preference number: 5 (lower is better)
Translates to: GAGASEAAAMMELVS*LPVMTSWEGVRASL
Trigger: CAGGGATGCCCTTACACCCTCCCACGATGTCATGACTGGCAGGCAGCTGACCAGTTCCATCATAGCAGCAGCCTCCGAAGCACCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS CCA 90 bp TTTGCTTTCTGTGGCCACACTGCATGGAGCCTGCTGTCCAAAGGCTaGCTCCCGGTCTGTGATGGGGCTGGAGTGCCGCAGCAGGTACTG +
Preference number: 5 (lower is better)
Translates to: FAFCGHTAWSLLSKG*LPVCDGAGVPQQVL
Trigger: CAGTACCTGCTGCGGCACTCCAGCCCCATCACAGACCGGGAGCCAGCCTTTGGACAGCAGGCTCCATGCAGTGTGGCCACAGAAAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCGCCAGAAGCTCCTCATaGCGGTGGTCTGTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: SPITARMHLTYHQIPAAAARSSS*RWSVAA
Trigger: GGCAGCAACAGACCACCGCAATGAGGAGCTTCTGGC...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCCAGGCGGCTCTTATGTaGCCGAAGGATACGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SPITARMHLTYHQIPAAAQAALM*PKDTGL
Trigger: GAGGCCCGTATCCTTCGGCAACATAAGAGCCGCCTG...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS TCA 90 bp TCTGCAGCCTCGGTATCTGGAGTAGTCTGTCCCTTCTCCCGGGGGTaGCTGCCTTCTGACTGCTGTGGAGAGGAAGCTAGGGACGAGCCT +
Preference number: 5 (lower is better)
Translates to: SAASVSGVVCPFSRG*LPSDCCGEEARDEP
Trigger: AGGCTCGTCCCTAGCTTCCTCTCCACAGCAGTCAGAAGGCAGTCACCCCCGGGAGAAGGGACAGACTACTCCAGATACCGAGGCTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 90 bp TTCTGTAGCTCCCCTTTGCTTTCTGTGGCCACACTGCATGGAGCCTaGTGTCCAAAGGCTGGCTCCCGGTCTGTGATGGGGCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: FCSSPLLSVATLHGA*CPKAGSRSVMGLEC
Trigger: GCACTCCAGCCCCATCACAGACCGGGAGCCAGCCTTTGGACAGCAGGCTCCATGCAGTGTGGCCACAGAAAGCAAAGGGGAGCTACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 90 bp TCTTATGTTGCCGAAGGATACGGGCCTCGGCCAGAAGCTCCTCATTaGGGTGGTCTGTTGCTGCCTCAGTGGAGCCGTCAGCCAGACTGG +
Preference number: 5 (lower is better)
Translates to: SYVAEGYGPRPEAPH*GGLLLPQWSRQPDW
Trigger: CCAGTCTGGCTGACGGCTCCACTGAGGCAGCAACAGACCACCGCAATGAGGAGCTTCTGGCCGAGGCCCGTATCCTTCGGCAACATAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACCTGGCCCACTGCAGTaGCCACAGGCCCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: DSPPQTSMERDILGEQPGPGPLQ*PQALSS
Trigger: GCTGCTGAGGGCCTGTGGCAACTGCAGTGGGCCAGG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 90 bp CAGCGGGCTGTCAACTTCTCCCACAGTTCACTGGCCACCGTCGCCTaGTTCCATACAAAGCGGCTGAGATTCTGGATCCGCTGTTTCGGG +
Preference number: 5 (lower is better)
Translates to: QRAVNFSHSSLATVA*FHTKRLRFWIRCFG
Trigger: CCCGAAACAGCGGATCCAGAATCTCAGCCGCTTTGTATGGAAGCAGGCGACGGTGGCCAGTGAACTGTGGGAGAAGTTGACAGCCCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CCA 90 bp AAGCCTGCTGGCAAAATGCTCAATTCGGGAGTGTGTGTCGGCGTGTaGCCACATCGGGGAAGAAGCCGGCGTCTCACTGTAGTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: KPAGKMLNSGVCVGV*PHRGRSRRLTVVSL
Trigger: GAGGCTGACTACAGTGAGACGCCGGCTTCTTCCCCGATGTGGCCACACGCCGACACACACTCCCGAATTGAGCATTTTGCCAGCAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTTCACTTGCTCAGCAATGGTGACCCGATGCAGAACAGCCAGCCACACCATGGAAACCCCAGCACCATCTaGAGGAGGTGCAGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: LHLLSNGDPMQNSQPHHGNPSTI*RRCRAG
Trigger: ACCAGCCCTGCACCTCCTCAAGATGGTGCTGGGGTT...TCCATGGTGTGGCTGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp CTGTGGTTAAAGTTACCAGGTCCAAGCGCAGGGCTTTCTGGACTCTGCGGAGTTACACTGGGCTCCACATaGCTGCCCCCAAAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LWLKLPGPSAGLSGLCGVTLGST*LPPKAA
Trigger: GGCAGCCTTTGGGGGCAGCAATGTGGAGCCCAGTGT...AACTCCGCAGAGTCCAGAAAGCCCTGCGCTTGGACCTGGTAACTTTAACCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAACACTGGGCTCCACATaGCTGCCCCCAAAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: DSPPQTSMERDILGEQPGTLGST*LPPKAA
Trigger: GGCAGCCTTTGGGGGCAGCAATGTGGAGCCCAGTGT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGGACTGGGGCTCCAGGTaGACCCACTCCAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: AELGFALFWHLNHLGEPRDWGSR*THSRNW
Trigger: CCAGTTCCTGGAGTGGGTCAACCTGGAGCCCCAGTC...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCGGTACCTGAACCCCTaGATGGGGCACTGCCTACAG +
Preference number: 5 (lower is better)
Translates to: LLGLASSWPQGFSFLCPARYLNP*MGHCLQ
Trigger: CTGTAGGCAGTGCCCCATCAAGGGGTTCAGGTACCG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCCATACTACTCCAGACTaGAGGTGGGCTTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SPITARMHLTYHQIPAAAHTTPD*RWASSS
Trigger: GGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTATG...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS TCA 90 bp CCCACAGTTCACTGGCCACCGTCGCCTGCTTCCATACAAAGCGGCTaGGATTCTGGATCCGCTGTTTCGGGGAGGTATCTTTGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: PTVHWPPSPASIQSG*DSGSAVSGRYLCSQ
Trigger: CTGAGAGCAAAGATACCTCCCCGAAACAGCGGATCCAGAATCTCAGCCGCTTTGTATGGAAGCAGGCGACGGTGGCCAGTGAACTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS TCA 90 bp AGAAGCTCCCTCAGACGCTGCAGCTGGGACTCTAGCTGCTTGTTGTaGTCTTCGAGGATCTGCATGCGCGTCTCCAGGCGGCTCTTATGT +
Preference number: 5 (lower is better)
Translates to: RSSLRRCSWDSSCLL*SSRICMRVSRRLLC
Trigger: ACATAAGAGCCGCCTGGAGACGCGCATGCAGATCCTCGAAGATCACAACAAGCAGCTAGAGTCCCAGCTGCAGCGTCTGAGGGAGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTACACAGAGTGGCACGTaGACCAGGATGCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLTQSGT*TRMPLS
Trigger: GGAAAGAGGCATCCTGGTCAACGTGCCACTCTGTGT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTACACTGGGCTCCACATaGCTGCCCCCAAAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFTLGST*LPPKAA
Trigger: GGCAGCCTTTGGGGGCAGCAATGTGGAGCCCAGTGT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCGGTACCTGAACCCCTaGATGGGGCACTGCCTACAG +
Preference number: 5 (lower is better)
Translates to: AELGFALFWHLNHLGEPRRYLNP*MGHCLQ
Trigger: CTGTAGGCAGTGCCCCATCAAGGGGTTCAGGTACCG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCTGGCAGATGTCAACGTaGAATTGCTTCAGACTCCGG +
Preference number: 5 (lower is better)
Translates to: SPITARMHLTYHQIPAAAWQMST*NCFRLR
Trigger: CCGGAGTCTGAAGCAATTCAACGTTGACATCTGCCA...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACAGGCGGCTCTTATGTaGCCGAAGGATACGGGCCTC +
Preference number: 5 (lower is better)
Translates to: DSPPQTSMERDILGEQPGQAALM*PKDTGL
Trigger: GAGGCCCGTATCCTTCGGCAACATAAGAGCCGCCTG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTTTTTGCCTCCCTGAGTaGCGCCAGAGAGTAGGGGTA +
Preference number: 5 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLFCLPE*RQRVGV
Trigger: TACCCCTACTCTCTGGCGCAACTCAGGGAGGCAAAA...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTGAAAGCAACACTCCCTaGCTCAGCAAGCTGCCACTG +
Preference number: 5 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLESNTP*LSKLPL
Trigger: CAGTGGCAGCTTGCTGAGCAAGGGAGTGTTGCTTTC...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGCCTGGCCCACTGCAGTaGCCACAGGCCCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKPGPLQ*PQALSS
Trigger: GCTGCTGAGGGCCTGTGGCAACTGCAGTGGGCCAGG...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CCA 90 bp ACTATAGGATGGGGATCTGGCTCCATCAAGAGGCCAGCAGGGTGTTaGCAGTCACATCAGAACTTCGCACACTGGGGAAGGCATGACGGA +
Preference number: 5 (lower is better)
Translates to: TIGWGSGSIKRPAGC*QSHQNFAHWGRHDG
Trigger: TCCGTCATGCCTTCCCCAGTGTGCGAAGTTCTGATGTGACTGCCAACACCCTGCTGGCCTCTTGATGGAGCCAGATCCCCATCCTATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTTTCCTCCATTGCCCCTaGAATCTCCAAGAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLFLHCP*NLQELL
Trigger: GAGCAGCTCTTGGAGATTCAAGGGGCAATGGAGGAA...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCTGCTTAGTTCCTCCATaGCCCCTTGAATCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: SPITARMHLTYHQIPAAACLVPP*PLESPR
Trigger: TCTTGGAGATTCAAGGGGCAATGGAGGAACTAAGCA...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp ACCAGGGCCCCAGGGGATAACAATAGACTCTCCAGGAAGATGGCTGAGGTTCTGTGTTTCCATCGGACGTaGATCTGTTCCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: TRAPGDNNRLSRKMAEVLCFHRT*ICSRAW
Trigger: CCAGGCCCTGGAACAGATCAACGTCCGATGGAAACA...CAGAACCTCAGCCATCTTCCTGGAGAGTCTATTGTTATCCCCTGGGGCCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGACACTGGGCTCCACATaGCTGCCCCCAAAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKTLGST*LPPKAA
Trigger: GGCAGCCTTTGGGGGCAGCAATGTGGAGCCCAGTGT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAAGGTAGACTGGGGCTCCAGGTaGACCCACTCCAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: KLLFPREPGQRCFSDVKVDWGSR*THSRNW
Trigger: CCAGTTCCTGGAGTGGGTCAACCTGGAGCCCCAGTC...TACCTTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGCCAGAAGCTCCTCATaGCGGTGGTCTGTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: NESGGKTSPRIGLFLASGARSSS*RWSVAA
Trigger: GGCAGCAACAGACCACCGCAATGAGGAGCTTCTGGC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCAGGCGGCTCTTATGTaGCCGAAGGATACGGGCCTC +
Preference number: 5 (lower is better)
Translates to: NESGGKTSPRIGLFLASGQAALM*PKDTGL
Trigger: GAGGCCCGTATCCTTCGGCAACATAAGAGCCGCCTG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAAGGCCTTGCTGTTGTaGTCTGGGTGGAAAGTGGCC +
Preference number: 5 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAKALLL*SGWKVA
Trigger: GGCCACTTTCCACCCAGACAACAACAGCAAGGCCTT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTTCTGTTGCTTTGGTCTaGAGGACAGCCCACCCCAAA +
Preference number: 5 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLSVALV*RTAHPK
Trigger: TTTGGGGTGGGCTGTCCTCAAGACCAAAGCAACAGA...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTAAACATCTCCTAGGATaGGCCTCTTCCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLKHLLG*ASSWPQ
Trigger: CTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS TCA 90 bp AGGGTGTTGGCAGTCACATCAGAACTTCGCACACTGGGGAAGGCATaGCGGAGTTTCTCCATGATGTCCTCCAAGCACAGGCTGACATCC +
Preference number: 5 (lower is better)
Translates to: RVLAVTSELRTLGKA*RSFSMMSSKHRLTS
Trigger: GGATGTCAGCCTGTGCTTGGAGGACATCATGGAGAAACTCCGTCATGCCTTCCCCAGTGTGCGAAGTTCTGATGTGACTGCCAACACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGAACCCCAGCACCATCTaGAGGAGGTGCAGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKNPSTI*RRCRAG
Trigger: ACCAGCCCTGCACCTCCTCAAGATGGTGCTGGGGTT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGAACCCCAGCACCATCTaGAGGAGGTGCAGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWNPSTI*RRCRAG
Trigger: ACCAGCCCTGCACCTCCTCAAGATGGTGCTGGGGTT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGGACTGGGGCTCCAGGTaGACCCACTCCAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKDWGSR*THSRNW
Trigger: CCAGTTCCTGGAGTGGGTCAACCTGGAGCCCCAGTC...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCACCCTACCTGAACCCCTaGATGGGGCACTGCCTACAG +
Preference number: 5 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPPYLNP*MGHCLQ
Trigger: CTGTAGGCAGTGCCCCATCAAGGGGTTCAGGTAGGG...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTGCAGCTTATTGCCTTaGCTGGCCCTGCCTGTCAAG +
Preference number: 5 (lower is better)
Translates to: AELGFALFWHLNHLGEPRCSLLP*LALPVK
Trigger: CTTGACAGGCAGGGCCAGCAAAGGCAATAAGCTGCA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTTTTGCCTCCCTGAGTaGCGCCAGAGAGTAGGGGTA +
Preference number: 5 (lower is better)
Translates to: AELGFALFWHLNHLGEPRFCLPE*RQRVGV
Trigger: TACCCCTACTCTCTGGCGCAACTCAGGGAGGCAAAA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCTGGGTTTGCTCTATTTaGGCACCTGAACCATTTAGG +
Preference number: 5 (lower is better)
Translates to: SPITARMHLTYHQIPAAAWVCSI*APEPFR
Trigger: CCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCA...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATGGGGTGGGCAGAGCTaGGGTTTGCTCTATTTTGGC +
Preference number: 5 (lower is better)
Translates to: DSPPQTSMERDILGEQPGWGGQS*GLLYFG
Trigger: GCCAAAATAGAGCAAACCCAAGCTCTGCCCACCCCA...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAACTTCCATGCCACCCTaGTCACCTCCCCCAAATCCT +
Preference number: 5 (lower is better)
Translates to: DSPPQTSMERDILGEQPGTSMPP*SPPPNP
Trigger: AGGATTTGGGGGAGGTGACAAGGGTGGCATGGAAGT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CCA 90 bp GCTGCTATGATGGAACTGGTCAGCTGCCTGCCAGTCATGACATCGTaGGAGGGTGTAAGGGCATCCCTGCATGACCATAGGTTGCATAAA +
Preference number: 5 (lower is better)
Translates to: AAMMELVSCLPVMTS*EGVRASLHDHRLHK
Trigger: TTTATGCAACCTATGGTCATGCAGGGATGCCCTTACACCCTCCCACGATGTCATGACTGGCAGGCAGCTGACCAGTTCCATCATAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS-3UTR CAA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCGCTGAGAACTTAATGTaGTTCAGATCAGCTAGGGTT +
Preference number: 5 (lower is better)
Translates to: SPITARMHLTYHQIPAAAAENLM*FRSARV
Trigger: AACCCTAGCTGATCTGAACAACATTAAGTTCTCAGC...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTTGCAGATCATGCTCATaGAAGATTTCCAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLCRSCS*KISRAV
Trigger: CACAGCCCTGGAAATCTTCAATGAGCATGATCTGCA...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGACACAGAGTGGCACGTaGACCAGGATGCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: NESGGKTSPRIGLFLASGTQSGT*TRMPLS
Trigger: GGAAAGAGGCATCCTGGTCAACGTGCCACTCTGTGT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp ACCAGGGCCCCAGGGGATAACAATAGACTCTCCAGGAAGATGGCTGAGGTTCTGACATTGAGGAGCCAATaGAGGCTCATGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: TRAPGDNNRLSRKMAEVLTLRSQ*RLMSTQ
Trigger: CTGTGTGGACATGAGCCTCAATTGGCTCCTCAATGT...CAGAACCTCAGCCATCTTCCTGGAGAGTCTATTGTTATCCCCTGGGGCCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGCGGTACCTGAACCCCTaGATGGGGCACTGCCTACAG +
Preference number: 5 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKRYLNP*MGHCLQ
Trigger: CTGTAGGCAGTGCCCCATCAAGGGGTTCAGGTACCG...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTGATGTCAACGTTGAATaGCTTCAGACTCCGGTACCT +
Preference number: 5 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLDVNVE*LQTPVP
Trigger: AGGTACCGGAGTCTGAAGCAATTCAACGTTGACATC...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTTGCAGCTTATTGCCTTaGCTGGCCCTGCCTGTCAAG +
Preference number: 5 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYACSLLP*LALPVK
Trigger: CTTGACAGGCAGGGCCAGCAAAGGCAATAAGCTGCA...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGGCCAGAAGCTCCTCATaGCGGTGGTCTGTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKARSSS*RWSVAA
Trigger: GGCAGCAACAGACCACCGCAATGAGGAGCTTCTGGC...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTTTTTGCCTCCCTGAGTaGCGCCAGAGAGTAGGGGTA +
Preference number: 5 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFFCLPE*RQRVGV
Trigger: TACCCCTACTCTCTGGCGCAACTCAGGGAGGCAAAA...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACATACTACTCCAGACTaGAGGTGGGCTTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: DSPPQTSMERDILGEQPGHTTPD*RWASSS
Trigger: GGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTATG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGGGCCAGCTTCCTGATTaGTGGCCTGTGGCTCCTATG +
Preference number: 5 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWGQLPD*WPVAPM
Trigger: CATAGGAGCCACAGGCCACAAATCAGGAAGCTGGCC...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTAAGGCCTTGCTGTTGTaGTCTGGGTGGAAAGTGGCC +
Preference number: 5 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFKALLL*SGWKVA
Trigger: GGCCACTTTCCACCCAGACAACAACAGCAAGGCCTT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAAGGAAGGCCTTGCTGTaGTTGTCTGGGTGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: DSPPQTSMERDILGEQPGRKALL*LSGWKV
Trigger: CACTTTCCACCCAGACAACAACAGCAAGGCCTTCCT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTATGCCTCCAAAGTCCTaGAGCCCTCCGTCCCACATT +
Preference number: 5 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAMPPKS*SPPSHI
Trigger: AATGTGGGACGGAGGGCTCAAGGACTTTGGAGGCAT...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTATGCCTCCAAAGTCCTaGAGCCCTCCGTCCCACATT +
Preference number: 5 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFMPPKS*SPPSHI
Trigger: AATGTGGGACGGAGGGCTCAAGGACTTTGGAGGCAT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACCTGGCCCACTGCAGTaGCCACAGGCCCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTPGPLQ*PQALSS
Trigger: GCTGCTGAGGGCCTGTGGCAACTGCAGTGGGCCAGG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTGTGAGAATTCAACTCTaGACCTGCTGCTTCAGTCCA +
Preference number: 5 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLVRIQL*TCCFSP
Trigger: TGGACTGAAGCAGCAGGTCAAGAGTTGAATTCTCAC...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGAAAACATCTCCTAGGATaGGCCTCTTCCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: DSPPQTSMERDILGEQPGKHLLG*ASSWPQ
Trigger: CTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTT...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCCTATGTGAAGGGAAATaGGATGGGATTTTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: SPITARMHLTYHQIPAAALCEGK*DGIFGL
Trigger: AAGGCCAAAAATCCCATCCAATTTCCCTTCACATAG...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGCCCAACCCTGTCCCTTaGTCCCCTAGACTTCCATGC +
Preference number: 5 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWPNPVP*SPRLPC
Trigger: GCATGGAAGTCTAGGGGACAAAGGGACAGGGTTGGG...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CCA 90 bp TTTGACCGGAACCAGGAGAGGACTATGAACTATAGGATGGGGATCTaGCTCCATCAAGAGGCCAGCAGGGTGTTGGCAGTCACATCAGAA +
Preference number: 5 (lower is better)
Translates to: FDRNQERTMNYRMGI*LHQEASRVLAVTSE
Trigger: TTCTGATGTGACTGCCAACACCCTGCTGGCCTCTTGATGGAGCCAGATCCCCATCCTATAGTTCATAGTCCTCTCCTGGTTCCGGTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCAAGCACCTCTTAGCTTaGTTGAGAGGAGTTAATTCA +
Preference number: 5 (lower is better)
Translates to: SPITARMHLTYHQIPAAAKHLLA*LRGVNS
Trigger: TGAATTAACTCCTCTCAACAAAGCTAAGAGGTGCTT...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395209.8
CDS-3UTR CAA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCATCAGAAATGGCAAGTaGGTGGGCCAGATCATTCAC +
Preference number: 5 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAIRNGK*VGQIIH
Trigger: GTGAATGATCTGGCCCACCAACTTGCCATTTCTGAT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGTTTCCATCGGACGTaGATCTGTTCCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKCFHRT*ICSRAW
Trigger: CCAGGCCCTGGAACAGATCAACGTCCGATGGAAACA...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTTCACTTGCTCAGCAATGGTGACCCGATGCAGAACAGCCAGCCACACCATGGATGCAGATCATGCTCATaGAAGATTTCCAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LHLLSNGDPMQNSQPHHGCRSCS*KISRAV
Trigger: CACAGCCCTGGAAATCTTCAATGAGCATGATCTGCA...TCCATGGTGTGGCTGGCTGTTCTGCATCGGGTCACCATTGCTGAGCAAGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCTGCAGATCATGCTCATaGAAGATTTCCAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LLGLASSWPQGFSFLCPACRSCS*KISRAV
Trigger: CACAGCCCTGGAAATCTTCAATGAGCATGATCTGCA...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTCACTGGCTGCCTGAGTaGGCCACTTGGCTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSHWLPE*ATWLKR
Trigger: CCTCTTCAGCCAAGTGGCCAACTCAGGCAGCCAGTG...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTCCCATCACTGCCCGCATGCACCTCACATACCACCAGATCCCTGCTGCTGCCATTTGTTCTTTAAGGTaGTGGCAAAGTCCCTCATGT +
Preference number: 5 (lower is better)
Translates to: SPITARMHLTYHQIPAAAICSLR*WQSPSC
Trigger: ACATGAGGGACTTTGCCACAACCTTAAAGAACAAAT...GGCAGCAGCAGGGATCTGGTGGTATGTGAGGTGCATGCGGGCAGTGATGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGCATACTACTCCAGACTaGAGGTGGGCTTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: NESGGKTSPRIGLFLASGHTTPD*RWASSS
Trigger: GGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTATG...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCAGCCTGGAAGGGTGTaGGATGGCAGTCATACTACT +
Preference number: 5 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFQPGRV*DGSHTT
Trigger: AGTAGTATGACTGCCATCCAACACCCTTCCAGGCTG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAGGAAGGCCTTGCTGTaGTTGTCTGGGTGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: NESGGKTSPRIGLFLASGRKALL*LSGWKV
Trigger: CACTTTCCACCCAGACAACAACAGCAAGGCCTTCCT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTGTTATAAAGCTCCTCTaGGGAGAAAGCTGCCTAAGT +
Preference number: 5 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLVIKLL*GESCLS
Trigger: ACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAAC...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCAGGTTTCTGTTGCTTaGGTCTTGAGGACAGCCCAC +
Preference number: 5 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFQVSVA*VLRTAH
Trigger: GTGGGCTGTCCTCAAGACCAAAGCAACAGAAACCTG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTCTAATAAAGGCCTGTTaGTCCTTTTCTGCATGGGGT +
Preference number: 5 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLLIKAC*SFSAWG
Trigger: ACCCCATGCAGAAAAGGACAAACAGGCCTTTATTAG...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGATGCCTCCAAAGTCCTaGAGCCCTCCGTCCCACATT +
Preference number: 5 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWMPPKS*SPPSHI
Trigger: AATGTGGGACGGAGGGCTCAAGGACTTTGGAGGCAT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTAAACATCTCCTAGGATaGGCCTCTTCCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFKHLLG*ASSWPQ
Trigger: CTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTT...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCATGGGATTTTTGGCCTaGAAATGGTGCCACAGACCA +
Preference number: 5 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAMGFLA*KWCHRP
Trigger: TGGTCTGTGGCACCATTTCAAGGCCAAAAATCCCAT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGACTTCCATGCCACCCTaGTCACCTCCCCCAAATCCT +
Preference number: 5 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKTSMPP*SPPPNP
Trigger: AGGATTTGGGGGAGGTGACAAGGGTGGCATGGAAGT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATAACCCCAGCACCATCTaGAGGAGGTGCAGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDNPSTI*RRCRAG
Trigger: ACCAGCCCTGCACCTCCTCAAGATGGTGCTGGGGTT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCAACCCCAGCACCATCTaGAGGAGGTGCAGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: TSMERDILGEQPGYIYLSNPSTI*RRCRAG
Trigger: ACCAGCCCTGCACCTCCTCAAGATGGTGCTGGGGTT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGTTCCTCCATTGCCCCTaGAATCTCCAAGAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWFLHCP*NLQELL
Trigger: GAGCAGCTCTTGGAGATTCAAGGGGCAATGGAGGAA...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp ACCAGGGCCCCAGGGGATAACAATAGACTCTCCAGGAAGATGGCTGAGGTTCTGGGGGAGAATTCTTCTTaGAACAGCTTAATAGCCTGG +
Preference number: 5 (lower is better)
Translates to: TRAPGDNNRLSRKMAEVLGENSS*NSLIAW
Trigger: CCAGGCTATTAAGCTGTTCAAAGAAGAATTCTCCCC...CAGAACCTCAGCCATCTTCCTGGAGAGTCTATTGTTATCCCCTGGGGCCCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGTGTTTCCATCGGACGTaGATCTGTTCCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKCFHRT*ICSRAW
Trigger: CCAGGCCCTGGAACAGATCAACGTCCGATGGAAACA...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp ACCAGGGCCCCAGGGGATAACAATAGACTCTCCAGGAAGATGGCTGAGGTTCTGCTTTATTGGGTGAAATaGCTCTTTCCCAGGGAACCT +
Preference number: 5 (lower is better)
Translates to: TRAPGDNNRLSRKMAEVLLYWVK*LFPREP
Trigger: AGGTTCCCTGGGAAAGAGCAATTTCACCCAATAAAG...CAGAACCTCAGCCATCTTCCTGGAGAGTCTATTGTTATCCCCTGGGGCCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTGCAGATCATGCTCATaGAAGATTTCCAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: AELGFALFWHLNHLGEPRCRSCS*KISRAV
Trigger: CACAGCCCTGGAAATCTTCAATGAGCATGATCTGCA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATACCAGCACACAGAGTGGCACGTaGACCAGGATGCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: LKLVTGIYCGVLMPAHTSTQSGT*TRMPLS
Trigger: GGAAAGAGGCATCCTGGTCAACGTGCCACTCTGTGT...GCTGGTATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTACACTGGGCTCCACATaGCTGCCCCCAAAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSTLGST*LPPKAA
Trigger: GGCAGCCTTTGGGGGCAGCAATGTGGAGCCCAGTGT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGACTGGGGCTCCAGGTaGACCCACTCCAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSDWGSR*THSRNW
Trigger: CCAGTTCCTGGAGTGGGTCAACCTGGAGCCCCAGTC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATCGGTACCTGAACCCCTaGATGGGGCACTGCCTACAG +
Preference number: 5 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDRYLNP*MGHCLQ
Trigger: CTGTAGGCAGTGCCCCATCAAGGGGTTCAGGTACCG...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGGATGTCAACGTTGAATaGCTTCAGACTCCGGTACCT +
Preference number: 5 (lower is better)
Translates to: AELGFALFWHLNHLGEPRDVNVE*LQTPVP
Trigger: AGGTACCGGAGTCTGAAGCAATTCAACGTTGACATC...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTTCTGTAGCTCCCCTTaGCTTTCTGTGGCCACACTG +
Preference number: 5 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKFCSSP*LSVATL
Trigger: CAGTGTGGCCACAGAAAGCAAAGGGGAGCTACAGAA...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGCATACTACTCCAGACTaGAGGTGGGCTTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKHTTPD*RWASSS
Trigger: GGAAGAGGAAGCCCACCTCAAGTCTGGAGTAGTATG...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGCAGGTTTCTGTTGCTTaGGTCTTGAGGACAGCCCAC +
Preference number: 5 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWQVSVA*VLRTAH
Trigger: GTGGGCTGTCCTCAAGACCAAAGCAACAGAAACCTG...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCTGGGTTTGCTCTATTTaGGCACCTGAACCATTTAGG +
Preference number: 5 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAWVCSI*APEPFR
Trigger: CCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCA...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGTGGGGTGGGCAGAGCTaGGGTTTGCTCTATTTTGGC +
Preference number: 5 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKWGGQS*GLLYFG
Trigger: GCCAAAATAGAGCAAACCCAAGCTCTGCCCACCCCA...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGATGGGATTTTTGGCCTaGAAATGGTGCCACAGACCA +
Preference number: 5 (lower is better)
Translates to: AELGFALFWHLNHLGEPRMGFLA*KWCHRP
Trigger: TGGTCTGTGGCACCATTTCAAGGCCAAAAATCCCAT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCAATTGGATGGGATTTTaGGCCTTGAAATGGTGCCAC +
Preference number: 5 (lower is better)
Translates to: LLGLASSWPQGFSFLCPANWMGF*ALKWCH
Trigger: GTGGCACCATTTCAAGGCCAAAAATCCCATCCAATT...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCAGAGCTGCTCTGTGTaGCTATGCAATCATATCACC +
Preference number: 5 (lower is better)
Translates to: AELGFALFWHLNHLGEPRQSCSV*LCNHIT
Trigger: GGTGATATGATTGCATAGCAACACAGAGCAGCTCTG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395209.8
CDS CCA 90 bp GACGCCTGTAGTTGTTTCCATCGGACGTTGATCTGTTCCAGGGCCTaGGAATTCTCCATTGACAAGTGCACATCAGAAATGGCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: DACSCFHRTLICSRA*EFSIDKCTSEMASW
Trigger: CCAACTTGCCATTTCTGATGTGCACTTGTCAATGGAGAATTCCCAGGCCCTGGAACAGATCAACGTCCGATGGAAACAACTACAGGCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp ACCAGGGCCCCAGGGGATAACAATAGACTCTCCAGGAAGATGGCTGAGGTTCTGGCAGTGCACCAACTATaGATCATTAAGCACCTCTTA +
Preference number: 5 (lower is better)
Translates to: TRAPGDNNRLSRKMAEVLAVHQL*IIKHLL
Trigger: TAAGAGGTGCTTAATGATCAATAGTTGGTGCACTGC...CAGAACCTCAGCCATCTTCCTGGAGAGTCTATTGTTATCCCCTGGGGCCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp CTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATACCAGCTTCCTCCATTGCCCCTaGAATCTCCAAGAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: LKLVTGIYCGVLMPAHTSFLHCP*NLQELL
Trigger: GAGCAGCTCTTGGAGATTCAAGGGGCAATGGAGGAA...GCTGGTATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp GGTGAAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAATGCTTAGTTCCTCCATaGCCCCTTGAATCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: GEIALSQGTWTEVLLGCQCLVPP*PLESPR
Trigger: TCTTGGAGATTCAAGGGGCAATGGAGGAACTAAGCA...TTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGACATTGAGGAGCCAATaGAGGCTCATGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWTLRSQ*RLMSTQ
Trigger: CTGTGTGGACATGAGCCTCAATTGGCTCCTCAATGT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGACATTGAGGAGCCAATaGAGGCTCATGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKTLRSQ*RLMSTQ
Trigger: CTGTGTGGACATGAGCCTCAATTGGCTCCTCAATGT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GACAGCCCACCCCAAACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGACCACTATCAAAAACATaGAGGAGCCAATTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: DSPPQTSMERDILGEQPGPLSKT*RSQLRL
Trigger: GAGCCTCAATTGGCTCCTCAATGTTTTTGATAGTGG...TCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGTTTGGGGTGGGCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCATCATCCCAGCAGGTATaGTTTTCCCTACCTGAACCC +
Preference number: 5 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPSSQQV*FSLPEP
Trigger: GGGTTCAGGTAGGGAAAACAATACCTGCTGGGATGA...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGATGTCAACGTTGAATaGCTTCAGACTCCGGTACCT +
Preference number: 5 (lower is better)
Translates to: NESGGKTSPRIGLFLASGDVNVE*LQTPVP
Trigger: AGGTACCGGAGTCTGAAGCAATTCAACGTTGACATC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTAAAGAAGGAGCAATTTaGACTTTCCATCTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLKEGAI*TFHLSK
Trigger: CTTGCTGAGATGGAAAGTCAAAATTGCTCCTTCTTT...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCAGGCGGCTCTTATGTaGCCGAAGGATACGGGCCTC +
Preference number: 5 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSQAALM*PKDTGL
Trigger: GAGGCCCGTATCCTTCGGCAACATAAGAGCCGCCTG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGCAGCCTGGAAGGGTGTaGGATGGCAGTCATACTACT +
Preference number: 5 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKQPGRV*DGSHTT
Trigger: AGTAGTATGACTGCCATCCAACACCCTTCCAGGCTG...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTCATTTCTGTGTCCTGCCCCTCGTAATGGCTTTTaGGCCTCTATCAAATTCTGT +
Preference number: 5 (lower is better)
Translates to: LLGLASSWPQGFSFLCPAPRNGF*ASIKFC
Trigger: ACAGAATTTGATAGAGGCCAAAAAGCCATTACGAGG...GGCAGGACACAGAAATGAGAAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCTATGGAGGGGCCACTACACACGGTAGCCAGTTGCAAATGCCTTGAAGAAAATGAGCACTaGAAACTCTTGATTCTAGCC +
Preference number: 5 (lower is better)
Translates to: PVAPMEGPLHTVASCKCLEENEH*KLLILA
Trigger: GGCTAGAATCAAGAGTTTCAAGTGCTCATTTTCTTC...AAGGCATTTGCAACTGGCTACCGTGTGTAGTGGCCCCTCCATAGGAGCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTATGGGATTTTTGGCCTaGAAATGGTGCCACAGACCA +
Preference number: 5 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAMGFLA*KWCHRP
Trigger: TGGTCTGTGGCACCATTTCAAGGCCAAAAATCCCAT...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTACTTCCATGCCACCCTaGTCACCTCCCCCAAATCCT +
Preference number: 5 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSTSMPP*SPPPNP
Trigger: AGGATTTGGGGGAGGTGACAAGGGTGGCATGGAAGT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATCCCAACCCTGTCCCTTaGTCCCCTAGACTTCCATGC +
Preference number: 5 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDPNPVP*SPRLPC
Trigger: GCATGGAAGTCTAGGGGACAAAGGGACAGGGTTGGG...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS TCA 90 bp GAATTCTTCTTTGAACAGCTTAATAGCCTGGATGTGCTCTGGGAGTaGATCAATGAAGAGATCCCCAATGGGCTCCCAAGTGGCTCGGAC +
Preference number: 5 (lower is better)
Translates to: EFFFEQLNSLDVLWE*INEEIPNGLPSGSD
Trigger: GTCCGAGCCACTTGGGAGCCCATTGGGGATCTCTTCATTGATTCACTCCCAGAGCACATCCAGGCTATTAAGCTGTTCAAAGAAGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS TCA 90 bp TTTCCATCGGACGTTGATCTGTTCCAGGGCCTGGGAATTCTCCATTaGCAAGTGCACATCAGAAATGGCAAGTTGGTGGGCCAGATCATT +
Preference number: 5 (lower is better)
Translates to: FPSDVDLFQGLGILH*QVHIRNGKLVGQII
Trigger: AATGATCTGGCCCACCAACTTGCCATTTCTGATGTGCACTTGTCAATGGAGAATTCCCAGGCCCTGGAACAGATCAACGTCCGATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GGTGAAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAACTGCATGACCATAGGTaGCATAAAAACCAAGGCTCA +
Preference number: 5 (lower is better)
Translates to: GEIALSQGTWTEVLLGCQLHDHR*HKNQGS
Trigger: TGAGCCTTGGTTTTTATGCAACCTATGGTCATGCAG...TTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp GGTGAAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAACAACTCCTCATCCTTTaGGCTGAGCCAGTCAATAAT +
Preference number: 5 (lower is better)
Translates to: GEIALSQGTWTEVLLGCQQLLIL*AEPVNN
Trigger: ATTATTGACTGGCTCAGCCAAAAGGATGAGGAGTTG...TTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGGGGAGAATTCTTCTTaGAACAGCTTAATAGCCTGG +
Preference number: 5 (lower is better)
Translates to: NESGGKTSPRIGLFLASGGENSS*NSLIAW
Trigger: CCAGGCTATTAAGCTGTTCAAAGAAGAATTCTCCCC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTGGGGAGAATTCTTCTTaGAACAGCTTAATAGCCTGG +
Preference number: 5 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFGENSS*NSLIAW
Trigger: CCAGGCTATTAAGCTGTTCAAAGAAGAATTCTCCCC...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCGCTGCGACCACTATCAAAAACATTGAGGAGCCAATTGAGGCTCATGTCCACAATCAGAAATGGCAAGTaGGTGGGCCAGATCATTCAC +
Preference number: 5 (lower is better)
Translates to: PLRPLSKTLRSQLRLMSTIRNGK*VGQIIH
Trigger: GTGAATGATCTGGCCCACCAACTTGCCATTTCTGAT...TGTGGACATGAGCCTCAATTGGCTCCTCAATGTTTTTGATAGTGGTCGCAGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTCCACTATCAAAAACATaGAGGAGCCAATTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAPLSKT*RSQLRL
Trigger: GAGCCTCAATTGGCTCCTCAATGTTTTTGATAGTGG...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCACTGGCTGCCTGAGTaGGCCACTTGGCTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLHWLPE*ATWLKR
Trigger: CCTCTTCAGCCAAGTGGCCAACTCAGGCAGCCAGTG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGTGGCAGATGTCAACGTaGAATTGCTTCAGACTCCGG +
Preference number: 5 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKWQMST*NCFRLR
Trigger: CCGGAGTCTGAAGCAATTCAACGTTGACATCTGCCA...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTTCTGTAGCTCCCCTTaGCTTTCTGTGGCCACACTG +
Preference number: 5 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSFCSSP*LSVATL
Trigger: CAGTGTGGCCACAGAAAGCAAAGGGGAGCTACAGAA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCGCCAGAAGCTCCTCATaGCGGTGGTCTGTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLARSSS*RWSVAA
Trigger: GGCAGCAACAGACCACCGCAATGAGGAGCTTCTGGC...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGGCCAGCTTCCTGATTaGTGGCCTGTGGCTCCTATG +
Preference number: 5 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTGQLPD*WPVAPM
Trigger: CATAGGAGCCACAGGCCACAAATCAGGAAGCTGGCC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTGTTATAAAGCTCCTCTaGGGAGAAAGCTGCCTAAGT +
Preference number: 5 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFVIKLL*GESCLS
Trigger: ACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAAC...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTCTGTTGCTTTGGTCTaGAGGACAGCCCACCCCAAA +
Preference number: 5 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSSVALV*RTAHPK
Trigger: TTTGGGGTGGGCTGTCCTCAAGACCAAAGCAACAGA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTGGGTTTGCTCTATTTaGGCACCTGAACCATTTAGG +
Preference number: 5 (lower is better)
Translates to: NESGGKTSPRIGLFLASGWVCSI*APEPFR
Trigger: CCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCA...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGACTGTCCCTGGACCCTaGAACAATACACTCACCTTA +
Preference number: 5 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKTVPGP*NNTLTL
Trigger: TAAGGTGAGTGTATTGTTCAAGGGTCCAGGGACAGT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGCCTCGTAATGGCTTTTaGGCCTCTATCAAATTCTGT +
Preference number: 5 (lower is better)
Translates to: AELGFALFWHLNHLGEPRPRNGF*ASIKFC
Trigger: ACAGAATTTGATAGAGGCCAAAAAGCCATTACGAGG...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGAATTGGATGGGATTTTaGGCCTTGAAATGGTGCCAC +
Preference number: 5 (lower is better)
Translates to: NESGGKTSPRIGLFLASGNWMGF*ALKWCH
Trigger: GTGGCACCATTTCAAGGCCAAAAATCCCATCCAATT...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCCCAACCCTGTCCCTTaGTCCCCTAGACTTCCATGC +
Preference number: 5 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSPNPVP*SPRLPC
Trigger: GCATGGAAGTCTAGGGGACAAAGGGACAGGGTTGGG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGTCAAAGTTAACCAATTaGTTCCCAACCCTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: AELGFALFWHLNHLGEPRSKLTN*FPTLSL
Trigger: AAGGGACAGGGTTGGGAACAAATTGGTTAACTTTGA...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAGCATGCAATGCCAGTCTTAAAAGACAATGCCCGCATCTTTCCGCTGCGACCACCAGTCAATAATCTCTaGAAGAGGGAGCTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: KHAMPVLKDNARIFPLRPPVNNL*KRELKL
Trigger: AAGCTTCAGCTCCCTCTTCAAGAGATTATTGACTGG...TGGTCGCAGCGGAAAGATGCGGGCATTGTCTTTTAAGACTGGCATTGCATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTATCAGAAATGGCAAGTaGGTGGGCCAGATCATTCAC +
Preference number: 5 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFIRNGK*VGQIIH
Trigger: GTGAATGATCTGGCCCACCAACTTGCCATTTCTGAT...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGATCAGAAATGGCAAGTaGGTGGGCCAGATCATTCAC +
Preference number: 5 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKIRNGK*VGQIIH
Trigger: GTGAATGATCTGGCCCACCAACTTGCCATTTCTGAT...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTTGTTTCCATCGGACGTaGATCTGTTCCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSCFHRT*ICSRAW
Trigger: CCAGGCCCTGGAACAGATCAACGTCCGATGGAAACA...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTACACAGAGTGGCACGTaGACCAGGATGCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSTQSGT*TRMPLS
Trigger: GGAAAGAGGCATCCTGGTCAACGTGCCACTCTGTGT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTGGCAGATGTCAACGTaGAATTGCTTCAGACTCCGG +
Preference number: 5 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSWQMST*NCFRLR
Trigger: CCGGAGTCTGAAGCAATTCAACGTTGACATCTGCCA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATTTCTGTAGCTCCCCTTaGCTTTCTGTGGCCACACTG +
Preference number: 5 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDFCSSP*LSVATL
Trigger: CAGTGTGGCCACAGAAAGCAAAGGGGAGCTACAGAA...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AATGAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGGGGCTGATCTCGAACTaGAAGATTAAAGGGAACATT +
Preference number: 5 (lower is better)
Translates to: NESGGKTSPRIGLFLASGGLISN*KIKGNI
Trigger: AATGTTCCCTTTAATCTTCAAGTTCGAGATCAGCCC...CCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTCATT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCATTTTGCCTCCCTGAGTaGCGCCAGAGAGTAGGGGTA +
Preference number: 5 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPFCLPE*RQRVGV
Trigger: TACCCCTACTCTCTGGCGCAACTCAGGGAGGCAAAA...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCGGCCAGCTTCCTGATTaGTGGCCTGTGGCTCCTATG +
Preference number: 5 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLGQLPD*WPVAPM
Trigger: CATAGGAGCCACAGGCCACAAATCAGGAAGCTGGCC...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGGTTATAAAGCTCCTCTaGGGAGAAAGCTGCCTAAGT +
Preference number: 5 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKVIKLL*GESCLS
Trigger: ACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAAC...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATTCTGTTGCTTTGGTCTaGAGGACAGCCCACCCCAAA +
Preference number: 5 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDSVALV*RTAHPK
Trigger: TTTGGGGTGGGCTGTCCTCAAGACCAAAGCAACAGA...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATGGGGTGGGCAGAGCTaGGGTTTGCTCTATTTTGGC +
Preference number: 5 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTWGGQS*GLLYFG
Trigger: GCCAAAATAGAGCAAACCCAAGCTCTGCCCACCCCA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GAATCTGGAGGGAAAACATCTCCTAGGATTGGCCTCTTCCTGGCCTCAGGGTTTCTATGTGAAGGGAAATaGGATGGGATTTTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: ESGGKTSPRIGLFLASGFLCEGK*DGIFGL
Trigger: AAGGCCAAAAATCCCATCCAATTTCCCTTCACATAG...AAACCCTGAGGCCAGGAAGAGGCCAATCCTAGGAGATGTTTTCCCTCCAGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCCCAACCCTGTCCCTTaGTCCCCTAGACTTCCATGC +
Preference number: 5 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLPNPVP*SPRLPC
Trigger: GCATGGAAGTCTAGGGGACAAAGGGACAGGGTTGGG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTTCAAAGTTAACCAATTaGTTCCCAACCCTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYASKLTN*FPTLSL
Trigger: AAGGGACAGGGTTGGGAACAAATTGGTTAACTTTGA...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GGTGAAATTGCTCTTTCCCAGGGAACCTGGACAGAGGTGCTTCTCGGATGTCAAAAGCACCTCTTAGCTTaGTTGAGAGGAGTTAATTCA +
Preference number: 5 (lower is better)
Translates to: GEIALSQGTWTEVLLGCQKHLLA*LRGVNS
Trigger: TGAATTAACTCCTCTCAACAAAGCTAAGAGGTGCTT...TTGACATCCGAGAAGCACCTCTGTCCAGGTTCCCTGGGAAAGAGCAATTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTCCAGTCAATAATCTCTaGAAGAGGGAGCTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFPVNNL*KRELKL
Trigger: AAGCTTCAGCTCCCTCTTCAAGAGATTATTGACTGG...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTGCTTAGTTCCTCCATaGCCCCTTGAATCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSCLVPP*PLESPR
Trigger: TCTTGGAGATTCAAGGGGCAATGGAGGAACTAAGCA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTCTTTATTGGGTGAAATaGCTCTTTCCCAGGGAACCT +
Preference number: 5 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFLYWVK*LFPREP
Trigger: AGGTTCCCTGGGAAAGAGCAATTTCACCCAATAAAG...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGGCTGAGAACTTAATGTaGTTCAGATCAGCTAGGGTT +
Preference number: 5 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKAENLM*FRSARV
Trigger: AACCCTAGCTGATCTGAACAACATTAAGTTCTCAGC...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTGCAGATCATGCTCATaGAAGATTTCCAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSCRSCS*KISRAV
Trigger: CACAGCCCTGGAAATCTTCAATGAGCATGATCTGCA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCACATTGAGGAGCCAATaGAGGCTCATGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: TSMERDILGEQPGYIYLSTLRSQ*RLMSTQ
Trigger: CTGTGTGGACATGAGCCTCAATTGGCTCCTCAATGT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCTGCAGCTTATTGCCTTaGCTGGCCCTGCCTGTCAAG +
Preference number: 5 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLCSLLP*LALPVK
Trigger: CTTGACAGGCAGGGCCAGCAAAGGCAATAAGCTGCA...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTAAAGAAGGAGCAATTTaGACTTTCCATCTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYAKEGAI*TFHLSK
Trigger: CTTGCTGAGATGGAAAGTCAAAATTGCTCCTTCTTT...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGGGGCTGATCTCGAACTaGAAGATTAAAGGGAACATT +
Preference number: 5 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKGLISN*KIKGNI
Trigger: AATGTTCCCTTTAATCTTCAAGTTCGAGATCAGCCC...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCGAAAGCAACACTCCCTaGCTCAGCAAGCTGCCACTG +
Preference number: 5 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLESNTP*LSKLPL
Trigger: CAGTGGCAGCTTGCTGAGCAAGGGAGTGTTGCTTTC...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTTCTGTTGCTTTGGTCTaGAGGACAGCCCACCCCAAA +
Preference number: 5 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSSVALV*RTAHPK
Trigger: TTTGGGGTGGGCTGTCCTCAAGACCAAAGCAACAGA...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTCTAATAAAGGCCTGTTaGTCCTTTTCTGCATGGGGT +
Preference number: 5 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFLIKAC*SFSAWG
Trigger: ACCCCATGCAGAAAAGGACAAACAGGCCTTTATTAG...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGCTAATAAAGGCCTGTTaGTCCTTTTCTGCATGGGGT +
Preference number: 5 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKLIKAC*SFSAWG
Trigger: ACCCCATGCAGAAAAGGACAAACAGGCCTTTATTAG...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GCAGAGCTTGGGTTTGCTCTATTTTGGCACCTGAACCATTTAGGGGAGCCCAGGAACATACAACACATTTaGGTAAATCCAACCCCAAGT +
Preference number: 5 (lower is better)
Translates to: AELGFALFWHLNHLGEPRNIQHI*VNPTPS
Trigger: ACTTGGGGTTGGATTTACCAAAATGTGTTGTATGTT...CCTGGGCTCCCCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCAAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TTGAGCCCTCCGTCCCACATTCCCGCCCACAATCTAGGCTTCTACAAATATGCTTCACATTCCTTATCATaGATGCTAATCCCACAGTCA +
Preference number: 5 (lower is better)
Translates to: LSPPSHIPAHNLGFYKYASHSLS*MLIPQS
Trigger: TGACTGTGGGATTAGCATCAATGATAAGGAATGTGA...AGCATATTTGTAGAAGCCTAGATTGTGGGCGGGAATGTGGGACGGAGGGCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGCCTCGTAATGGCTTTTaGGCCTCTATCAAATTCTGT +
Preference number: 5 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWPRNGF*ASIKFC
Trigger: ACAGAATTTGATAGAGGCCAAAAAGCCATTACGAGG...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AGGTTTCCAGAGCAACTCGCAACTCAGTGGGTCTCTCAAAATGCTGAGGACTTTGCAGTGCACCAACTATaGATCATTAAGCACCTGGAA +
Preference number: 5 (lower is better)
Translates to: RFPEQLATQWVSQNAEDFAVHQL*IIKHLE
Trigger: TTCCAGGTGCTTAATGATCAATAGTTGGTGCACTGC...AAAGTCCTCAGCATTTTGAGAGACCCACTGAGTTGCGAGTTGCTCTGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538510.1
CDS-3UTR CAA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTCAACTCCTCATCCTTTaGGCTGAGCCAGTCAATAAT +
Preference number: 5 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSQLLIL*AEPVNN
Trigger: ATTATTGACTGGCTCAGCCAAAAGGATGAGGAGTTG...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCTTCCTCCATTGCCCCTaGAATCTCCAAGAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLFLHCP*NLQELL
Trigger: GAGCAGCTCTTGGAGATTCAAGGGGCAATGGAGGAA...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCATCAGAAATGGCAAGTaGGTGGGCCAGATCATTCAC +
Preference number: 5 (lower is better)
Translates to: TSMERDILGEQPGYIYLSIRNGK*VGQIIH
Trigger: GTGAATGATCTGGCCCACCAACTTGCCATTTCTGAT...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGGCTGAGAACTTAATGTaGTTCAGATCAGCTAGGGTT +
Preference number: 5 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKAENLM*FRSARV
Trigger: AACCCTAGCTGATCTGAACAACATTAAGTTCTCAGC...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAACATTGAGGAGCCAATaGAGGCTCATGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPTLRSQ*RLMSTQ
Trigger: CTGTGTGGACATGAGCCTCAATTGGCTCCTCAATGT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCAGGCAAAAATACCCTaGACTGGGCAAACGCAGGAA +
Preference number: 5 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSQAKIP*TGQTQE
Trigger: TTCCTGCGTTTGCCCAGTCAAGGGTATTTTTGCCTG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000402866.5
CDS-3UTR CAA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCGATGTCAACGTTGAATaGCTTCAGACTCCGGTACCT +
Preference number: 5 (lower is better)
Translates to: TSMERDILGEQPGYIYLSDVNVE*LQTPVP
Trigger: AGGTACCGGAGTCTGAAGCAATTCAACGTTGACATC...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTTGGCAGATGTCAACGTaGAATTGCTTCAGACTCCGG +
Preference number: 5 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSWQMST*NCFRLR
Trigger: CCGGAGTCTGAAGCAATTCAACGTTGACATCTGCCA...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTCAACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGATTTGTTCTTTAAGGTaGTGGCAAAGTCCCTCATGT +
Preference number: 5 (lower is better)
Translates to: VNCRALGYKAPLGRKLPKICSLR*WQSPSC
Trigger: ACATGAGGGACTTTGCCACAACCTTAAAGAACAAAT...CTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AACTGCAGGGCTCTAGGTTATAAAGCTCCTCTTGGGAGAAAGCTGCCTAAGTGGAAAGAAGGAGCAATTTaGACTTTCCATCTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: NCRALGYKAPLGRKLPKWKEGAI*TFHLSK
Trigger: CTTGCTGAGATGGAAAGTCAAAATTGCTCCTTCTTT...CCACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAACCTAGAGCCCTGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCAGCCTGGAAGGGTGTaGGATGGCAGTCATACTACT +
Preference number: 5 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLQPGRV*DGSHTT
Trigger: AGTAGTATGACTGCCATCCAACACCCTTCCAGGCTG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATGTGAGAATTCAACTCTaGACCTGCTGCTTCAGTCCA +
Preference number: 5 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDVRIQL*TCCFSP
Trigger: TGGACTGAAGCAGCAGGTCAAGAGTTGAATTCTCAC...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATATGGGATTTTTGGCCTaGAAATGGTGCCACAGACCA +
Preference number: 5 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDMGFLA*KWCHRP
Trigger: TGGTCTGTGGCACCATTTCAAGGCCAAAAATCCCAT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTAATTGGATGGGATTTTaGGCCTTGAAATGGTGCCAC +
Preference number: 5 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSNWMGF*ALKWCH
Trigger: GTGGCACCATTTCAAGGCCAAAAATCCCATCCAATT...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCCAACTCCTCATCCTTTaGGCTGAGCCAGTCAATAAT +
Preference number: 5 (lower is better)
Translates to: TSMERDILGEQPGYIYLSQLLIL*AEPVNN
Trigger: ATTATTGACTGGCTCAGCCAAAAGGATGAGGAGTTG...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTTGCTTAGTTCCTCCATaGCCCCTTGAATCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSCLVPP*PLESPR
Trigger: TCTTGGAGATTCAAGGGGCAATGGAGGAACTAAGCA...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCATGCTTAGTTCCTCCATaGCCCCTTGAATCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPCLVPP*PLESPR
Trigger: TCTTGGAGATTCAAGGGGCAATGGAGGAACTAAGCA...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAGAAAGCAACACTCCCTaGCTCAGCAAGCTGCCACTG +
Preference number: 5 (lower is better)
Translates to: QFEDWIHLPELEITILGTESNTP*LSKLPL
Trigger: CAGTGGCAGCTTGCTGAGCAAGGGAGTGTTGCTTTC...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCGTTATAAAGCTCCTCTaGGGAGAAAGCTGCCTAAGT +
Preference number: 5 (lower is better)
Translates to: TSMERDILGEQPGYIYLSVIKLL*GESCLS
Trigger: ACTTAGGCAGCTTTCTCCCAAGAGGAGCTTTATAAC...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACATGGGGTGGGCAGAGCTaGGGTTTGCTCTATTTTGGC +
Preference number: 5 (lower is better)
Translates to: QFEDWIHLPELEITILGTWGGQS*GLLYFG
Trigger: GCCAAAATAGAGCAAACCCAAGCTCTGCCCACCCCA...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTACTGTCCCTGGACCCTaGAACAATACACTCACCTTA +
Preference number: 5 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSTVPGP*NNTLTL
Trigger: TAAGGTGAGTGTATTGTTCAAGGGTCCAGGGACAGT...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGGAGCACTTGAAACTCTaGATTCTAGCCTTTCTAATC +
Preference number: 5 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKEHLKL*ILAFLI
Trigger: GATTAGAAAGGCTAGAATCAAGAGTTTCAAGTGCTC...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAACTTCCATGCCACCCTaGTCACCTCCCCCAAATCCT +
Preference number: 5 (lower is better)
Translates to: QFEDWIHLPELEITILGTTSMPP*SPPPNP
Trigger: AGGATTTGGGGGAGGTGACAAGGGTGGCATGGAAGT...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTTCAAAGTTAACCAATTaGTTCCCAACCCTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSSKLTN*FPTLSL
Trigger: AAGGGACAGGGTTGGGAACAAATTGGTTAACTTTGA...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCCAGTCAATAATCTCTaGAAGAGGGAGCTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSPVNNL*KRELKL
Trigger: AAGCTTCAGCTCCCTCTTCAAGAGATTATTGACTGG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACCAGTCAATAATCTCTaGAAGAGGGAGCTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPPVNNL*KRELKL
Trigger: AAGCTTCAGCTCCCTCTTCAAGAGATTATTGACTGG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAACTCCTCATCCTTTaGGCTGAGCCAGTCAATAAT +
Preference number: 5 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPQLLIL*AEPVNN
Trigger: ATTATTGACTGGCTCAGCCAAAAGGATGAGGAGTTG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGGGGAGAATTCTTCTTaGAACAGCTTAATAGCCTGG +
Preference number: 5 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTGENSS*NSLIAW
Trigger: CCAGGCTATTAAGCTGTTCAAAGAAGAATTCTCCCC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATGCTGAGAACTTAATGTaGTTCAGATCAGCTAGGGTT +
Preference number: 5 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDAENLM*FRSARV
Trigger: AACCCTAGCTGATCTGAACAACATTAAGTTCTCAGC...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TTATTCCTTAAGTTGGTCACAGGTATATACTGTGGTGTGCTGATGCCAGCTCATCCACTATCAAAAACATaGAGGAGCCAATTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: LFLKLVTGIYCGVLMPAHPLSKT*RSQLRL
Trigger: GAGCCTCAATTGGCTCCTCAATGTTTTTGATAGTGG...ATGAGCTGGCATCAGCACACCACAGTATATACCTGTGACCAACTTAAGGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTCCACTATCAAAAACATaGAGGAGCCAATTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSPLSKT*RSQLRL
Trigger: GAGCCTCAATTGGCTCCTCAATGTTTTTGATAGTGG...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACCACTATCAAAAACATaGAGGAGCCAATTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPPLSKT*RSQLRL
Trigger: GAGCCTCAATTGGCTCCTCAATGTTTTTGATAGTGG...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAGCAGTGCACCAACTATaGATCATTAAGCACCTTCTG +
Preference number: 5 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPAVHQL*IIKHLL
Trigger: CAGAAGGTGCTTAATGATCAATAGTTGGTGCACTGC...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402866.5
CDS-3UTR CAA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCGGGCTGATCTCGAACTaGAAGATTAAAGGGAACATT +
Preference number: 5 (lower is better)
Translates to: TSMERDILGEQPGYIYLSGLISN*KIKGNI
Trigger: AATGTTCCCTTTAATCTTCAAGTTCGAGATCAGCCC...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAAGGAAGGCCTTGCTGTaGTTGTCTGGGTGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: QFEDWIHLPELEITILGTRKALL*LSGWKV
Trigger: CACTTTCCACCCAGACAACAACAGCAAGGCCTTCCT...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCATGGGTTTGCTCTATTTaGGCACCTGAACCATTTAGG +
Preference number: 5 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPWVCSI*APEPFR
Trigger: CCTAAATGGTTCAGGTGCCAAAATAGAGCAAACCCA...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CCTCTTGGGAGAAAGCTGCCTAAGTGGGCTCTGAATCTATTCAACATTCCCAAGAACATACAACACATTTaGGTAAATCCAACCCCAAGT +
Preference number: 5 (lower is better)
Translates to: PLGRKLPKWALNLFNIPKNIQHI*VNPTPS
Trigger: ACTTGGGGTTGGATTTACCAAAATGTGTTGTATGTT...CTTGGGAATGTTGAATAGATTCAGAGCCCACTTAGGCAGCTTTCTCCCAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TCTGAATCTATTCAACATTCCCAAGCCCACTCCCCCACCCCTACTATCTATTCTGAAGAAAATGAGCACTaGAAACTCTTGATTCTAGCC +
Preference number: 5 (lower is better)
Translates to: SESIQHSQAHSPTPTIYSEENEH*KLLILA
Trigger: GGCTAGAATCAAGAGTTTCAAGTGCTCATTTTCTTC...AGAATAGATAGTAGGGGTGGGGGAGTGGGCTTGGGAATGTTGAATAGATTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAAATTGGATGGGATTTTaGGCCTTGAAATGGTGCCAC +
Preference number: 5 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTNWMGF*ALKWCH
Trigger: GTGGCACCATTTCAAGGCCAAAAATCCCATCCAATT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp ACATCAATGGAGAGAGATATCCTAGGGGAACAGCCAGGATACATCTATCTTTCCTCAAAGTTAACCAATTaGTTCCCAACCCTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: TSMERDILGEQPGYIYLSSKLTN*FPTLSL
Trigger: AAGGGACAGGGTTGGGAACAAATTGGTTAACTTTGA...GGAAAGATAGATGTATCCTGGCTGTTCCCCTAGGATATCTCTCTCCATTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAGCAGTGCACCAACTATaGATCATTAAGCACCTCTTA +
Preference number: 5 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPAVHQL*IIKHLL
Trigger: TAAGAGGTGCTTAATGATCAATAGTTGGTGCACTGC...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395209.8
CDS-3UTR CAA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCCAGTCAATAATCTCTaGAAGAGGGAGCTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLPVNNL*KRELKL
Trigger: AAGCTTCAGCTCCCTCTTCAAGAGATTATTGACTGG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCTTTATTGGGTGAAATaGCTCTTTCCCAGGGAACCT +
Preference number: 5 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLLYWVK*LFPREP
Trigger: AGGTTCCCTGGGAAAGAGCAATTTCACCCAATAAAG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACACAGGCAAAAATACCCTaGACTGGGCAAACGCAGGAA +
Preference number: 5 (lower is better)
Translates to: QFEDWIHLPELEITILGTQAKIP*TGQTQE
Trigger: TTCCTGCGTTTGCCCAGTCAAGGGTATTTTTGCCTG...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395209.8
ENST00000402866.5
CDS-3UTR CAA 90 bp TGTTCTCCCCTTAAGGAAGGTCTGTCAGGGACTGAGGCTAAAGAAAATGAAGATAAAGAAGGAGCAATTTaGACTTTCCATCTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: CSPLKEGLSGTEAKENEDKEGAI*TFHLSK
Trigger: CTTGCTGAGATGGAAAGTCAAAATTGCTCCTTCTTT...ATCTTCATTTTCTTTAGCCTCAGTCCCTGACAGACCTTCCTTAAGGGGAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAGGGCTGATCTCGAACTaGAAGATTAAAGGGAACATT +
Preference number: 5 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPGLISN*KIKGNI
Trigger: AATGTTCCCTTTAATCTTCAAGTTCGAGATCAGCCC...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACACTATGTGAAGGGAAATaGGATGGGATTTTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTLCEGK*DGIFGL
Trigger: AAGGCCAAAAATCCCATCCAATTTCCCTTCACATAG...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAATTTGTTCTTTAAGGTaGTGGCAAAGTCCCTCATGT +
Preference number: 5 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTICSLR*WQSPSC
Trigger: ACATGAGGGACTTTGCCACAACCTTAAAGAACAAAT...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAGTGAGAATTCAACTCTaGACCTGCTGCTTCAGTCCA +
Preference number: 5 (lower is better)
Translates to: QFEDWIHLPELEITILGTVRIQL*TCCFSP
Trigger: TGGACTGAAGCAGCAGGTCAAGAGTTGAATTCTCAC...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACAACTGTCCCTGGACCCTaGAACAATACACTCACCTTA +
Preference number: 5 (lower is better)
Translates to: QFEDWIHLPELEITILGTTVPGP*NNTLTL
Trigger: TAAGGTGAGTGTATTGTTCAAGGGTCCAGGGACAGT...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTTCACATTCCTTATCATaGATGCTAATCCCACAGTCA +
Preference number: 5 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSSHSLS*MLIPQS
Trigger: TGACTGTGGGATTAGCATCAATGATAAGGAATGTGA...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACATCACATTCCTTATCATaGATGCTAATCCCACAGTCA +
Preference number: 5 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTSHSLS*MLIPQS
Trigger: TGACTGTGGGATTAGCATCAATGATAAGGAATGTGA...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCCCTCGTAATGGCTTTTaGGCCTCTATCAAATTCTGT +
Preference number: 5 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLPRNGF*ASIKFC
Trigger: ACAGAATTTGATAGAGGCCAAAAAGCCATTACGAGG...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGAGCACTTGAAACTCTaGATTCTAGCCTTTCTAATC +
Preference number: 5 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTEHLKL*ILAFLI
Trigger: GATTAGAAAGGCTAGAATCAAGAGTTTCAAGTGCTC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp AAATCCTACATAACAAGATCTACATCTTTTCTACCATGCCTGGCCCACTGCAGTGAGCACTTGAAACTCTaGATTCTAGCCTTTCTAATC +
Preference number: 5 (lower is better)
Translates to: KSYITRSTSFLPCLAHCSEHLKL*ILAFLI
Trigger: GATTAGAAAGGCTAGAATCAAGAGTTTCAAGTGCTC...ACTGCAGTGGGCCAGGCATGGTAGAAAAGATGTAGATCTTGTTATGTAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp TGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCACAGAAGAAAATGAGCACTaGAAACTCTTGATTCTAGCC +
Preference number: 5 (lower is better)
Translates to: WIHSTQGSIYLTVGKFPTEENEH*KLLILA
Trigger: GGCTAGAATCAAGAGTTTCAAGTGCTCATTTTCTTC...TGTGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CAGTTTGAGGATTGGATTCACCTTCCAGAGTTAGAAATAACAATTTTAGGCACACAACTCCTCATCCTTTaGGCTGAGCCAGTCAATAAT +
Preference number: 5 (lower is better)
Translates to: QFEDWIHLPELEITILGTQLLIL*AEPVNN
Trigger: ATTATTGACTGGCTCAGCCAAAAGGATGAGGAGTTG...TGTGCCTAAAATTGTTATTTCTAACTCTGGAAGGTGAATCCAATCCTCAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp CTCGTAATGGCTTTTTGGCCTCTATCAAATTCTGTCAAGAAGAAATCACCTCTCATTTGTTCTTTAAGGTaGTGGCAAAGTCCCTCATGT +
Preference number: 5 (lower is better)
Translates to: LVMAFWPLSNSVKKKSPLICSLR*WQSPSC
Trigger: ACATGAGGGACTTTGCCACAACCTTAAAGAACAAAT...GAGAGGTGATTTCTTCTTGACAGAATTTGATAGAGGCCAAAAAGCCATTACGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS-3UTR CAA 90 bp GTTGGATTCATAGTACCCAAGGATCCATTTACCTTACTGTGGGAAAATTCCCCAAACATACAACACATTTaGGTAAATCCAACCCCAAGT +
Preference number: 5 (lower is better)
Translates to: VGFIVPKDPFTLLWENSPNIQHI*VNPTPS
Trigger: ACTTGGGGTTGGATTTACCAAAATGTGTTGTATGTT...TGGGGAATTTTCCCACAGTAAGGTAAATGGATCCTTGGGTACTATGAATCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 72 bp GGCCTCGGCCAGAAGCTCCTCATTGCGGTGGTCTGTTaGTGCCTCAGTGGAGCCGTCAGCCAGACTGGGTGC +
Preference number: 6 (lower is better)
Translates to: GLGQKLLIAVVC*CLSGAVSQTGC
Trigger: GCACCCAGTCTGGCTGACGGCTCCACTGAGGCAGCAACAGACCACCGCAATGAGGAGCTTCTGGCCGAGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CCA 72 bp TGTGGCCACACTGCATGGAGCCTGCTGTCCAAAGGCTaGCTCCCGGTCTGTGATGGGGCTGGAGTGCCGCAG +
Preference number: 6 (lower is better)
Translates to: CGHTAWSLLSKG*LPVCDGAGVPQ
Trigger: CTGCGGCACTCCAGCCCCATCACAGACCGGGAGCCAGCCTTTGGACAGCAGGCTCCATGCAGTGTGGCCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 72 bp CTCGGCCAGAAGCTCCTCATTGCGGTGGTCTGTTGCTaGCTCAGTGGAGCCGTCAGCCAGACTGGGTGCCTC +
Preference number: 6 (lower is better)
Translates to: LGQKLLIAVVCC*LSGAVSQTGCL
Trigger: GAGGCACCCAGTCTGGCTGACGGCTCCACTGAGGCAGCAACAGACCACCGCAATGAGGAGCTTCTGGCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 72 bp GCCGAAGGATACGGGCCTCGGCCAGAAGCTCCTCATTaGGGTGGTCTGTTGCTGCCTCAGTGGAGCCGTCAG +
Preference number: 6 (lower is better)
Translates to: AEGYGPRPEAPH*GGLLLPQWSRQ
Trigger: CTGACGGCTCCACTGAGGCAGCAACAGACCACCGCAATGAGGAGCTTCTGGCCGAGGCCCGTATCCTTCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CAA 90 bp GAAGGATACGGGCCTCGGCCAGAAGCTCCTCATTGCGGTGGTCTGTaGCTGCCTCAGTGGAGCCGTCAGCCAGACTGGGTGCCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: EGYGPRPEAPHCGGL*LPQWSRQPDWVPQL
Trigger: CAGCTGAGGCACCCAGTCTGGCTGACGGCTCCACTGAGGCAGCAACAGACCACCGCAATGAGGAGCTTCTGGCCGAGGCCCGTATCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 72 bp CCAAAGGCTGGCTCCCGGTCTGTGATGGGGCTGGAGTaGCGCAGCAGGTACTGGTCCTCGTCTATGCTGTCA +
Preference number: 6 (lower is better)
Translates to: PKAGSRSVMGLE*RSRYWSSSMLS
Trigger: TGACAGCATAGACGAGGACCAGTACCTGCTGCGGCACTCCAGCCCCATCACAGACCGGGAGCCAGCCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CCA 72 bp AGGATACGGGCCTCGGCCAGAAGCTCCTCATTGCGGTaGTCTGTTGCTGCCTCAGTGGAGCCGTCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: RIRASARSSSLR*SVAASVEPSAR
Trigger: TCTGGCTGACGGCTCCACTGAGGCAGCAACAGACCACCGCAATGAGGAGCTTCTGGCCGAGGCCCGTATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CAA 72 bp TGCCGAAGGATACGGGCCTCGGCCAGAAGCTCCTCATaGCGGTGGTCTGTTGCTGCCTCAGTGGAGCCGTCA +
Preference number: 6 (lower is better)
Translates to: CRRIRASARSSS*RWSVAASVEPS
Trigger: TGACGGCTCCACTGAGGCAGCAACAGACCACCGCAATGAGGAGCTTCTGGCCGAGGCCCGTATCCTTCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CAA 72 bp GAGGATCTGCATGCGCGTCTCCAGGCGGCTCTTATGTaGCCGAAGGATACGGGCCTCGGCCAGAAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: EDLHARLQAALM*PKDTGLGQKLL
Trigger: GAGGAGCTTCTGGCCGAGGCCCGTATCCTTCGGCAACATAAGAGCCGCCTGGAGACGCGCATGCAGATCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 72 bp AGGATCTGCATGCGCGTCTCCAGGCGGCTCTTATGTTaGCGAAGGATACGGGCCTCGGCCAGAAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: RICMRVSRRLLC*RRIRASARSSS
Trigger: TGAGGAGCTTCTGGCCGAGGCCCGTATCCTTCGGCAACATAAGAGCCGCCTGGAGACGCGCATGCAGATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 72 bp GTGGAGAGGAAGCTAGGGACGAGCCTGCAGAGCCACTaGCATCTGATTCGGTGGGTGGCTGCAGGAGAAGCT +
Preference number: 6 (lower is better)
Translates to: VERKLGTSLQSH*HLIRWVAAGEA
Trigger: AGCTTCTCCTGCAGCCACCCACCGAATCAGATGGCAGTGGCTCTGCAGGCTCGTCCCTAGCTTCCTCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CCA 72 bp CGGTCTGTGATGGGGCTGGAGTGCCGCAGCAGGTACTaGTCCTCGTCTATGCTGTCATCTGGGGACAAGCTG +
Preference number: 6 (lower is better)
Translates to: RSVMGLECRSRY*SSSMLSSGDKL
Trigger: CAGCTTGTCCCCAGATGACAGCATAGACGAGGACCAGTACCTGCTGCGGCACTCCAGCCCCATCACAGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CAA 90 bp CTCTTATGTTGCCGAAGGATACGGGCCTCGGCCAGAAGCTCCTCATaGCGGTGGTCTGTTGCTGCCTCAGTGGAGCCGTCAGCCAGACTG +
Preference number: 6 (lower is better)
Translates to: LLCCRRIRASARSSS*RWSVAASVEPSARL
Trigger: CAGTCTGGCTGACGGCTCCACTGAGGCAGCAACAGACCACCGCAATGAGGAGCTTCTGGCCGAGGCCCGTATCCTTCGGCAACATAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CAA 90 bp GTGATCTTCGAGGATCTGCATGCGCGTCTCCAGGCGGCTCTTATGTaGCCGAAGGATACGGGCCTCGGCCAGAAGCTCCTCATTGCGGTG +
Preference number: 6 (lower is better)
Translates to: VIFEDLHARLQAALM*PKDTGLGQKLLIAV
Trigger: CACCGCAATGAGGAGCTTCTGGCCGAGGCCCGTATCCTTCGGCAACATAAGAGCCGCCTGGAGACGCGCATGCAGATCCTCGAAGATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS TCA 72 bp CTCAGACGCTGCAGCTGGGACTCTAGCTGCTTGTTGTaGTCTTCGAGGATCTGCATGCGCGTCTCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: LRRCSWDSSCLL*SSRICMRVSRR
Trigger: CCGCCTGGAGACGCGCATGCAGATCCTCGAAGATCACAACAAGCAGCTAGAGTCCCAGCTGCAGCGTCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CCA 72 bp TGCTGTGACCCAGGCCCAAAGTCCCGGTGGGCATCCTaGAGCTGCTTAAGCCTCTCACTAACTGACGCCTGT +
Preference number: 6 (lower is better)
Translates to: CCDPGPKSRWAS*SCLSLSLTDAC
Trigger: ACAGGCGTCAGTTAGTGAGAGGCTTAAGCAGCTCCAGGATGCCCACCGGGACTTTGGGCCTGGGTCACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS TCA 72 bp CTCCTCAAATGGGTGCTGGGACAGGAAGGCCTGAGCTaGCTCCAGCACAGAATAGATGTAGGGGCCCCGAGA +
Preference number: 6 (lower is better)
Translates to: LLKWVLGQEGLS*LQHRIDVGAPR
Trigger: TCTCGGGGCCCCTACATCTATTCTGTGCTGGAGTCAGCTCAGGCCTTCCTGTCCCAGCACCCATTTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS TCA 72 bp TCGGTATCTGGAGTAGTCTGTCCCTTCTCCCGGGGGTaGCTGCCTTCTGACTGCTGTGGAGAGGAAGCTAGG +
Preference number: 6 (lower is better)
Translates to: SVSGVVCPFSRG*LPSDCCGEEAR
Trigger: CCTAGCTTCCTCTCCACAGCAGTCAGAAGGCAGTCACCCCCGGGAGAAGGGACAGACTACTCCAGATACCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 72 bp GCTTCGGAGGCTGCTGCTATGATGGAACTGGTCAGCTaGCTGCCAGTCATGACATCGTGGGAGGGTGTAAGG +
Preference number: 6 (lower is better)
Translates to: ASEAAAMMELVS*LPVMTSWEGVR
Trigger: CCTTACACCCTCCCACGATGTCATGACTGGCAGGCAGCTGACCAGTTCCATCATAGCAGCAGCCTCCGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS GCA 72 bp GTGGAGTCCAGTTTGGTTCACGTACAGGAGAGAAAGTaGTGTGACCCAGGCCCAAAGTCCCGGTGGGCATCC +
Preference number: 6 (lower is better)
Translates to: VESSLVHVQERK*CDPGPKSRWAS
Trigger: GGATGCCCACCGGGACTTTGGGCCTGGGTCACAGCACTTTCTCTCCTGTACGTGAACCAAACTGGACTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372916.8
CDS CCA 72 bp CCAATGGGCTCCCAAGTGGCTCGGACTCCCTCAGCTTaGCTCAGAGTAGTGCTTAGTTCCTCCATTGCCCCT +
Preference number: 6 (lower is better)
Translates to: PMGSQVARTPSA*LRVVLSSSIAP
Trigger: AGGGGCAATGGAGGAACTAAGCACTACTCTGAGCCAAGCTGAGGGAGTCCGAGCCACTTGGGAGCCCATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CCA 72 bp GGCAAAATGCTCAATTCGGGAGTGTGTGTCGGCGTGTaGCCACATCGGGGAAGAAGCCGGCGTCTCACTGTA +
Preference number: 6 (lower is better)
Translates to: GKMLNSGVCVGV*PHRGRSRRLTV
Trigger: TACAGTGAGACGCCGGCTTCTTCCCCGATGTGGCCACACGCCGACACACACTCCCGAATTGAGCATTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS TCA 72 bp GGCTGGGCTGCCTCTGTGAATCAGCAAAGAAGTCCCTaGGACAGGGATGCCGACAGCTGCTGTATGCACACT +
Preference number: 6 (lower is better)
Translates to: GWAASVNQQRSP*DRDADSCCMHT
Trigger: AGTGTGCATACAGCAGCTGTCGGCATCCCTGTCTCAGGGACTTCTTTGCTGATTCACAGAGGCAGCCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000541709.5
CDS TCA 72 bp CACTGGCCACCGTCGCCTGCTTCCATACAAAGCGGCTaGGATTCTGGATCCGCTGTTTCGGGGAGGTATCTT +
Preference number: 6 (lower is better)
Translates to: HWPPSPASIQSG*DSGSAVSGRYL
Trigger: AAGATACCTCCCCGAAACAGCGGATCCAGAATCTCAGCCGCTTTGTATGGAAGCAGGCGACGGTGGCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS GCA 72 bp GTCAACTTCTCCCACAGTTCACTGGCCACCGTCGCCTaGTTCCATACAAAGCGGCTGAGATTCTGGATCCGC +
Preference number: 6 (lower is better)
Translates to: VNFSHSSLATVA*FHTKRLRFWIR
Trigger: GCGGATCCAGAATCTCAGCCGCTTTGTATGGAAGCAGGCGACGGTGGCCAGTGAACTGTGGGAGAAGTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CCA 72 bp ATGGAACTGGTCAGCTGCCTGCCAGTCATGACATCGTaGGAGGGTGTAAGGGCATCCCTGCATGACCATAGG +
Preference number: 6 (lower is better)
Translates to: MELVSCLPVMTS*EGVRASLHDHR
Trigger: CCTATGGTCATGCAGGGATGCCCTTACACCCTCCCACGATGTCATGACTGGCAGGCAGCTGACCAGTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
CDS CAA 72 bp ATGGGGATCTGGCTCCATCAAGAGGCCAGCAGGGTGTaGGCAGTCACATCAGAACTTCGCACACTGGGGAAG +
Preference number: 6 (lower is better)
Translates to: MGIWLHQEASRV*AVTSELRTLGK
Trigger: CTTCCCCAGTGTGCGAAGTTCTGATGTGACTGCCAACACCCTGCTGGCCTCTTGATGGAGCCAGATCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CAA 90 bp CGGTTCTCATCTTCCAAGTGGGCCAGGATCTTCTGTAGCTCCCCTTaGCTTTCTGTGGCCACACTGCATGGAGCCTGCTGTCCAAAGGCT +
Preference number: 6 (lower is better)
Translates to: RFSSSKWARIFCSSP*LSVATLHGACCPKA
Trigger: AGCCTTTGGACAGCAGGCTCCATGCAGTGTGGCCACAGAAAGCAAAGGGGAGCTACAGAAGATCCTGGCCCACTTGGAAGATGAGAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS TCA 72 bp AGAAGCCGGCGTCTCACTGTAGTCAGCCTCCAGCACTaGTTGCACAGGCAGATAACCTCGCTGAGGGTGTTT +
Preference number: 6 (lower is better)
Translates to: RSRRLTVVSLQH*LHRQITSLRVF
Trigger: AAACACCCTCAGCGAGGTTATCTGCCTGTGCAATCAGTGCTGGAGGCTGACTACAGTGAGACGCCGGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CAA 72 bp TCTTCCAAGTGGGCCAGGATCTTCTGTAGCTCCCCTTaGCTTTCTGTGGCCACACTGCATGGAGCCTGCTGT +
Preference number: 6 (lower is better)
Translates to: SSKWARIFCSSP*LSVATLHGACC
Trigger: ACAGCAGGCTCCATGCAGTGTGGCCACAGAAAGCAAAGGGGAGCTACAGAAGATCCTGGCCCACTTGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS TCA 72 bp GCAGTCACATCAGAACTTCGCACACTGGGGAAGGCATaGCGGAGTTTCTCCATGATGTCCTCCAAGCACAGG +
Preference number: 6 (lower is better)
Translates to: AVTSELRTLGKA*RSFSMMSSKHR
Trigger: CCTGTGCTTGGAGGACATCATGGAGAAACTCCGTCATGCCTTCCCCAGTGTGCGAAGTTCTGATGTGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CCA 72 bp AACCAGGAGAGGACTATGAACTATAGGATGGGGATCTaGCTCCATCAAGAGGCCAGCAGGGTGTTGGCAGTC +
Preference number: 6 (lower is better)
Translates to: NQERTMNYRMGI*LHQEASRVLAV
Trigger: GACTGCCAACACCCTGCTGGCCTCTTGATGGAGCCAGATCCCCATCCTATAGTTCATAGTCCTCTCCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS TCA 72 bp TGGCTCAGAGTAGTGCTTAGTTCCTCCATTGCCCCTTaGATCTCCAAGAGCTGCTCCAGAGTCCGCTCAATG +
Preference number: 6 (lower is better)
Translates to: WLRVVLSSSIAP*ISKSCSRVRSM
Trigger: CATTGAGCGGACTCTGGAGCAGCTCTTGGAGATTCAAGGGGCAATGGAGGAACTAAGCACTACTCTGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CCA 72 bp AGCTCTCCCTGGAGAATCCGGTTCTCATCTTCCAAGTaGGCCAGGATCTTCTGTAGCTCCCCTTTGCTTTCT +
Preference number: 6 (lower is better)
Translates to: SSPWRIRFSSSK*ARIFCSSPLLS
Trigger: AGAAAGCAAAGGGGAGCTACAGAAGATCCTGGCCCACTTGGAAGATGAGAACCGGATTCTCCAGGGAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS TCA 72 bp GACGTTGATCTGTTCCAGGGCCTGGGAATTCTCCATTaGCAAGTGCACATCAGAAATGGCAAGTTGGTGGGC +
Preference number: 6 (lower is better)
Translates to: DVDLFQGLGILH*QVHIRNGKLVG
Trigger: GCCCACCAACTTGCCATTTCTGATGTGCACTTGTCAATGGAGAATTCCCAGGCCCTGGAACAGATCAACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS TCA 72 bp TGTTCTCACTGGATGTGGTCGGTGTGTAATACTCCATaGTGGGGTAGTGCAGCTTATTGCCTTTGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: CSHWMWSVCNTP*WGSAAYCLCWP
Trigger: GGGCCAGCAAAGGCAATAAGCTGCACTACCCCATCATGGAGTATTACACACCGACCACATCCAGTGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CAA 72 bp TCACTAACTGACGCCTGTAGTTGTTTCCATCGGACGTaGATCTGTTCCAGGGCCTGGGAATTCTCCATTGAC +
Preference number: 6 (lower is better)
Translates to: SLTDACSCFHRT*ICSRAWEFSID
Trigger: GTCAATGGAGAATTCCCAGGCCCTGGAACAGATCAACGTCCGATGGAAACAACTACAGGCGTCAGTTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS TCA 72 bp TTTGAACAGCTTAATAGCCTGGATGTGCTCTGGGAGTaGATCAATGAAGAGATCCCCAATGGGCTCCCAAGT +
Preference number: 6 (lower is better)
Translates to: FEQLNSLDVLWE*INEEIPNGLPS
Trigger: ACTTGGGAGCCCATTGGGGATCTCTTCATTGATTCACTCCCAGAGCACATCCAGGCTATTAAGCTGTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CAA 90 bp TATGCTGTCATCTGGGGACAAGCTGTCATTAAAGAAGGAGCAATTTaGACTTTCCATCTCAGCAAGCCTGCTGGCAAAATGCTCAATTCG +
Preference number: 6 (lower is better)
Translates to: YAVIWGQAVIKEGAI*TFHLSKPAGKMLNS
Trigger: CGAATTGAGCATTTTGCCAGCAGGCTTGCTGAGATGGAAAGTCAAAATTGCTCCTTCTTTAATGACAGCTTGTCCCCAGATGACAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CCA 72 bp TCCATTGACAAGTGCACATCAGAAATGGCAAGTTGGTaGGCCAGATCATTCACCAACTTTACTCCATCTTTC +
Preference number: 6 (lower is better)
Translates to: SIDKCTSEMASW*ARSFTNFTPSF
Trigger: GAAAGATGGAGTAAAGTTGGTGAATGATCTGGCCCACCAACTTGCCATTTCTGATGTGCACTTGTCAATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372916.8
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5
CDS CCA 72 bp AATAATGCTTGGAGCGGAATTTGTTCTTTAAGGTTGTaGCAAAGTCCCTCATGTTCTCACTGGATGTGGTCG +
Preference number: 6 (lower is better)
Translates to: NNAWSGICSLRL*QSPSCSHWMWS
Trigger: CGACCACATCCAGTGAGAACATGAGGGACTTTGCCACAACCTTAAAGAACAAATTCCGCTCCAAGCATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395209.8
ENST00000402866.5
ENST00000538510.1
ENST00000541709.5