RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DROSHA (Homo sapiens)

Ensembl gene IDs: ENSG00000113360

Ensembl transcript IDs: ENST00000344624.8, ENST00000504133.5, ENST00000504361.1, ENST00000505601.5, ENST00000507174.1, ENST00000507438.5, ENST00000509067.1, ENST00000509608.1, ENST00000510178.1, ENST00000510375.5, ENST00000511367.6, ENST00000511778.5, ENST00000511803.1, ENST00000512076.1, ENST00000512124.6, ENST00000512166.2, ENST00000512302.1, ENST00000512885.1, ENST00000513349.5, ENST00000514927.6

Found 626 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGTCTAGGGTCACAATCTaGGACACAGATGGAAAAACA +
Preference number: 2 (lower is better)
Translates to: LQGPLREADKSYKPSSFLSRVTI*DTDGKT
Trigger: TGTTTTTCCATCTGTGTCCCAGATTGTGACCCTAGA...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
3UTR-3UTR GCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCCTACAAAACACTCACTaGTTAGAGAGAGGTAAGTTC +
Preference number: 2 (lower is better)
Translates to: CRAHLERLIKAINPPPSCLQNTH*LERGKF
Trigger: GAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAG...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
3UTR-3UTR TCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGAACAGTCACAGTTACTaGGCAAGTAAATACTCCACA +
Preference number: 2 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLNSHSY*ASKYST
Trigger: TGTGGAGTATTTACTTGCTCAGTAACTGTGACTGTT...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
3UTR-3UTR CCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTCAGGGTGAGAGCACTTaGTTTAAAGTGTGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLQGEST*FKVWPG
Trigger: GCCAGGCCACACTTTAAACCAAGTGCTCTCACCCTG...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
3UTR-3UTR TCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACCCACCGGATGAAAGCTaGACAATCTACTTAAAAATC +
Preference number: 2 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHPPDES*TIYLKI
Trigger: GATTTTTAAGTAGATTGTTCAGCTTTCATCCGGTGG...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
3UTR-3UTR GCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACACTTCATTCATTGTCTaGAGGAAAACTAGGCTAGGT +
Preference number: 2 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHTSFIV*RKTRLG
Trigger: ACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
3UTR-3UTR TCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTCCACCGGATGAAAGCTaGACAATCTACTTAAAAATC +
Preference number: 2 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLPPDES*TIYLKI
Trigger: GATTTTTAAGTAGATTGTTCAGCTTTCATCCGGTGG...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
3UTR-3UTR GCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTACTTCATTCATTGTCTaGAGGAAAACTAGGCTAGGT +
Preference number: 2 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLTSFIV*RKTRLG
Trigger: ACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
3UTR-3UTR GCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTCTACAAAACACTCACTaGTTAGAGAGAGGTAAGTTC +
Preference number: 2 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLLQNTH*LERGKF
Trigger: GAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAG...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
3UTR-3UTR CAA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGTTTGCAGCTGATAACTaGATGAACAGCCACCGGATG +
Preference number: 3 (lower is better)
Translates to: LQGPLREADKSYKPSSFLFAADN*MNSHRM
Trigger: CATCCGGTGGCTGTTCATCAAGTTATCAGCTGCAAA...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
3UTR-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGCACACTTCATTCATaGTCTGCAGGAAAACTAGGC +
Preference number: 3 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLSTLHS*SAGKLG
Trigger: GCCTAGTTTTCCTGCAGACAATGAATGAAGTGTGCT...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
3UTR GCA 72 bp AATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTaGAGGGCCCACTTAGAGAGGCTGATAAAAGCTATA +
Preference number: 3 (lower is better)
Translates to: NVMSLNVMLAFY*RAHLERLIKAI
Trigger: TATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
3UTR GCA 72 bp GTATTTTATTTCAATGAGCACACTTCATTCATTGTCTaGAGGAAAACTAGGCTAGGTCTCAATAGACAACAG +
Preference number: 3 (lower is better)
Translates to: VFYFNEHTSFIV*RKTRLGLNRQQ
Trigger: CTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGTGTGCTCATTGAAATAAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAAAGAGGGCCTTGCGCTaGCGGAGGCATGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPKRALR*RRHGWG
Trigger: CCCCCACCCATGCCTCCGTCAGCGCAAGGCCCTCTT...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCACTGCTGCGGCATGACTaGAGGGGGCGGGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPLLRHD*RGRGMR
Trigger: CCTCATCCCCCGCCCCCTCCAGTCATGCCGCAGCAG...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCGGGGGAAGAGGGCCTTaGGCTGACGGAGGCATGGGT +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCGGRGP*ADGGMG
Trigger: ACCCATGCCTCCGTCAGCGCAAGGCCCTCTTCCCCC...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCATTCTCCTGTCGGGACTaGGGCCTCGCTCCCGCCGAT +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPFSCRD*GLAPAD
Trigger: ATCGGCGGGAGCGAGGCCGCAGTCCCGACAGGAGAA...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAGGTCCGCCAAGGTCTTaGTGCGAAGCGCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPGPPRS*CEAPQA
Trigger: GGCCTGTGGCGCTTCGCACCAAGACCTTGGCGGACC...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCGGAACTGGGAAGGGGTaGCTCATCTGGTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCGTGKG*LIWWLG
Trigger: CCCCAACCACCAGATGAGGCACCCCTTCCCAGTTCC...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTGGCGTACTCCTGCATaGCCAGCTCCTCCGCTACCT +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCWRTPA*PAPPLP
Trigger: AGGTAGCGGAGGAGCTGGGCATGCAGGAGTACGCCA...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCAAGGGGTGCCTCATCTaGTGGTTGGGGAAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCKGCLI*WLGKGG
Trigger: GCCGCCTTTCCCCAACCACCAGATGAGGCACCCCTT...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGGGTTCGGGCATGGGATaGGCCCACTGTCTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLGSGMG*AHCLQS
Trigger: ACTCTGCAGACAGTGGGCCCATCCCATGCCCGAACC...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCCCTAAAGGATGGTGCTaGGGGTCTGGCTCCATGTCC +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCPKGWC*GSGSMS
Trigger: GGACATGGAGCCAGACCCTCAGCACCATCCTTTAGG...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAAGGGAGGGGGCATCATaGAGGGGAAAGTGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPREGAS*RGKCLV
Trigger: GACAAGGCACTTTCCCCTTCATGATGCCCCCTCCCT...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGGGGGGAAGAGGGCCTTaGGCTGACGGAGGCATGGGT +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLGGRGP*ADGGMG
Trigger: ACCCATGCCTCCGTCAGCGCAAGGCCCTCTTCCCCC...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGTGCTCCGTTCGTAGCTaGGGTGGCGAGATGGTGTTC +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLCSVRS*GGEMVF
Trigger: GAACACCATCTCGCCACCGCAGCTACGAACGGAGCA...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAGTTATGGCGTACTCCTaGATGCCCAGCTCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPVMAYS*MPSSSA
Trigger: AGCGGAGGAGCTGGGCATGCAGGAGTACGCCATAAC...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGGTTATGGCGTACTCCTaGATGCCCAGCTCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLVMAYS*MPSSSA
Trigger: AGCGGAGGAGCTGGGCATGCAGGAGTACGCCATAAC...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAATGGTGCTGAGGGTCTaGCTCCATGTCCTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPMVLRV*LHVLLV
Trigger: GACGAGGAGGACATGGAGCCAGACCCTCAGCACCAT...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCCTCACTGGGAGCCTTTaGGAGTGGGTATGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCLTGSL*EWVWRE
Trigger: CTCCCTCCATACCCACTCCCAAAGGCTCCCAGTGAG...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAGGGACCTTCTCTCACTaGGAGCCTTTGGGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPGTFSH*EPLGVG
Trigger: ACCCACTCCCAAAGGCTCCCAGTGAGAGAAGGTCCC...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAGCTGCGGTGGCGAGATaGTGTTCTCCCTCGGTCATA +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPAAVAR*CSPSVI
Trigger: TATGACCGAGGGAGAACACCATCTCGCCACCGCAGC...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCGCTGCGGTGGCGAGATaGTGTTCTCCCTCGGTCATA +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCAAVAR*CSPSVI
Trigger: TATGACCGAGGGAGAACACCATCTCGCCACCGCAGC...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCGCTTTGGCCTTTTCTTaGCTGCTCCCCAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCALAFS*LLPNSS
Trigger: GGAGGAGTTGGGGAGCAGGCAAGAAAAGGCCAAAGC...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGGCTTTGGCCTTTTCTTaGCTGCTCCCCAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLALAFS*LLPNSS
Trigger: GGAGGAGTTGGGGAGCAGGCAAGAAAAGGCCAAAGC...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGCCGCCAAGGTCTTGGTaGGAAGCGCCACAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLPPRSW*EAPQAS
Trigger: AGAGGCCTGTGGCGCTTCGCACCAAGACCTTGGCGG...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAAGAGGGCCTTGCGCTaGCGGAGGCATGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSKRALR*RRHGWG
Trigger: CCCCCACCCATGCCTCCGTCAGCGCAAGGCCCTCTT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCCTACTTGGGGAGCGATaGTTCACAATCTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCLLGER*FTISRG
Trigger: ACCCCTGGAGATTGTGAATCATCGCTCCCCAAGTAG...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTACCAAAGTTCATCATaGAGTCGGTCAGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCYQSSS*SRSGWA
Trigger: GGCCCACCCTGACCGACTTCATGATGAACTTTGGTA...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCAGCTCCTCCCACTaGAGCATATTGGCAATCTCC +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCSSSSH*SILAIS
Trigger: GGAGATTGCCAATATGCTTCAGTGGGAGGAGCTGGA...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCATCGATGAACCGCTTCTaGTGGGCCATCTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPSMNRF*WAIWGK
Trigger: TTTTCCCCAGATGGCCCATCAGAAGCGGTTCATCGA...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCGATGAACCGCTTCTaGTGGGCCATCTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCSMNRF*WAIWGK
Trigger: TTTTCCCCAGATGGCCCATCAGAAGCGGTTCATCGA...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCATGTACTTCCGTTCGATaGACCGCTTCTGATGGGCCA +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPCTSVR*TASDGP
Trigger: TGGCCCATCAGAAGCGGTTCATCGAACGGAAGTACA...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGTGTACTTCCGTTCGATaGACCGCTTCTGATGGGCCA +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLCTSVR*TASDGP
Trigger: TGGCCCATCAGAAGCGGTTCATCGAACGGAAGTACA...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCCTTCGGTTGTCTCGATaGCTGTGTCTCTCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCLRLSR*LCLSRS
Trigger: AGAACGGGAGAGACACAGGCATCGAGACAACCGAAG...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGGGCTTCCTCCCTCTGTaGCAGCTTCTGTTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLGFLPL*QLLFVS
Trigger: ACTGACAAACAGAAGCTGGCACAGAGGGAGGAAGCC...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGTGGCGTACTCCTGCATaGCCAGCTCCTCCGCTACCT +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLWRTPA*PAPPLP
Trigger: AGGTAGCGGAGGAGCTGGGCATGCAGGAGTACGCCA...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGGATGGGCCCACTGTCTaGAGAGTCTTGTACAGAGGA +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLDGPTV*RVLYRG
Trigger: TCCTCTGTACAAGACTCTGCAGACAGTGGGCCCATC...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCGATGGGCCCACTGTCTaGAGAGTCTTGTACAGAGGA +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCDGPTV*RVLYRG
Trigger: TCCTCTGTACAAGACTCTGCAGACAGTGGGCCCATC...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGAAGCGCATCCATTGCTaGTCCCATTTCCGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLKRIHC*SHFRLL
Trigger: CAGCAAGCGGAAATGGGAGCAGCAATGGATGCGCTT...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACAGGTACCAAGACAGTaGCACCGCCCGCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSQVPRQ*HRPRLR
Trigger: CCGGAGGCGCGGGCGGTGCCACTGTCTTGGTACCTG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACTGCTGCGGCATGACTaGAGGGGGCGGGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSLLRHD*RGRGMR
Trigger: CCTCATCCCCCGCCCCCTCCAGTCATGCCGCAGCAG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCACTCCCACCTGATCCATaGGGTCACTGGAGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPLPPDP*GHWSSS
Trigger: ACTACTACTCCAGTGACCCCATGGATCAGGTGGGAG...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCACCTGATCCATaGGGTCACTGGAGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLLPPDP*GHWSSS
Trigger: ACTACTACTCCAGTGACCCCATGGATCAGGTGGGAG...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGGGTTCGGGCATGGGATaGGCCCACTGTCTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLGSGMG*AHCLQS
Trigger: ACTCTGCAGACAGTGGGCCCATCCCATGCCCGAACC...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCCAGGGTGAGAGCACTTaGTTTAAAGTGTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCQGEST*FKVWPG
Trigger: GCCAGGCCACACTTTAAACCAAGTGCTCTCACCCTG...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCAAGAGGGCCTTGCGCTaGCGGAGGCATGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICKRALR*RRHGWG
Trigger: CCCCCACCCATGCCTCCGTCAGCGCAAGGCCCTCTT...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGAGGGAGGGGGCATCATaGAGGGGAAAGTGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLREGAS*RGKCLV
Trigger: GACAAGGCACTTTCCCCTTCATGATGCCCCCTCCCT...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGGGGAAGAGGGCCTTaGGCTGACGGAGGCATGGGT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGGRGP*ADGGMG
Trigger: ACCCATGCCTCCGTCAGCGCAAGGCCCTCTTCCCCC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATTCTCCTGTCGGGACTaGGGCCTCGCTCCCGCCGAT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSFSCRD*GLAPAD
Trigger: ATCGGCGGGAGCGAGGCCGCAGTCCCGACAGGAGAA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGGTCTTGCCTTTGCGCTaGATTTGCAGAGTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLVLPLR*ICRVVH
Trigger: ATGGACCACTCTGCAAATGCAGCGCAAAGGCAAGAC...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGTTCAAGCGCATCCATTaGTGCTCCCATTTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLFKRIH*CSHFRL
Trigger: CAAGCGGAAATGGGAGCAGCAATGGATGCGCTTGAA...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAAGCAGCCTCAGATTTTaGGGCCTAAAGGATGGTGCT +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPSSLRF*GLKDGA
Trigger: AGCACCATCCTTTAGGCCCCAAAATCTGAGGCTGCT...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCATACAAAGTCTGGTCGTaGAGGGAGAAAATTGGGGGC +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPYKVWS*REKIGG
Trigger: GCCCCCAATTTTCTCCCTCCACGACCAGACTTTGTA...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGAAAACAAGGAGGAACTaGGAAGGGGTGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLKTRRN*EGVPHL
Trigger: CAGATGAGGCACCCCTTCCCAGTTCCTCCTTGTTTT...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCGCATTGGTGGTGGCATaGGAGGAAAACAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCALVVA*EENKEE
Trigger: TTCCTCCTTGTTTTCCTCCCATGCCACCACCAATGC...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGGCATTGGTGGTGGCATaGGAGGAAAACAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLALVVA*EENKEE
Trigger: TTCCTCCTTGTTTTCCTCCCATGCCACCACCAATGC...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAAGGACAAGGCATTGGTaGTGGCATGGGAGGAAAACA +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPRTRHW*WHGRKT
Trigger: TGTTTTCCTCCCATGCCACCACCAATGCCTTGTCCT...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGAGGTGCCCCAGGGACTaGGGGGTTATTAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLRCPRD*GVIRTR
Trigger: CCTTGTCCTAATAACCCCCCAGTCCCTGGGGCACCT...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACCTGCTGCGGCATGACTaGAGGGGGCGGGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHLLRHD*RGRGMR
Trigger: CCTCATCCCCCGCCCCCTCCAGTCATGCCGCAGCAG...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGGGGACCTTCTCTCACTaGGAGCCTTTGGGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLGTFSH*EPLGVG
Trigger: ACCCACTCCCAAAGGCTCCCAGTGAGAGAAGGTCCC...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGTCCGCCAAGGTCTTaGTGCGAAGCGCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGPPRS*CEAPQA
Trigger: GGCCTGTGGCGCTTCGCACCAAGACCTTGGCGGACC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCATGTTCACGATCCAGTTaGTCGATACGGACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPCSRSS*SIRTEL
Trigger: AAGCTCTGTCCGTATCGATCAACTGGATCGTGAACA...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGAGCATCATTGCATGCTaGCAGACATCAGAACGGATG +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLSIIAC*QTSERM
Trigger: CATCCGTTCTGATGTCTGTCAGCATGCAATGATGCT...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAAGCATCATTGCATGCTaGCAGACATCAGAACGGATG +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPSIIAC*QTSERM
Trigger: CATCCGTTCTGATGTCTGTCAGCATGCAATGATGCT...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGGGTGGAGAGGATAATTaGGCCAGACTTCGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLGGEDN*ARLRAG
Trigger: ACCTGCGCGAAGTCTGGCTCAATTATCCTCTCCACC...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCCAGCGCTGCAATAAATaGTTCCAAAAGGTCCGCCAA +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCQRCNK*FQKVRQ
Trigger: TTGGCGGACCTTTTGGAATCATTTATTGCAGCGCTG...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACTTCTCCTGTCGGGACTaGGGCCTCGCTCCCGCCGAT +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHFSCRD*GLAPAD
Trigger: ATCGGCGGGAGCGAGGCCGCAGTCCCGACAGGAGAA...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCCCTTTGCGCTGCATTTaGAGAGTGGTCCATCATTCA +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCPLRCI*RVVHHS
Trigger: TGAATGATGGACCACTCTGCAAATGCAGCGCAAAGG...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCAAGCGTCCAAATAACTaGTTGGCTTCCTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCKRPNN*LASSRL
Trigger: AAGCCTGGAGGAAGCCAAGCAGTTATTTGGACGCTT...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGTCTGTGGCTACCAGTTaGATTATGGAGTCACCTAGG +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLSVATS*IMESPR
Trigger: CCTAGGTGACTCCATAATGCAACTGGTAGCCACAGA...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACCGCCAAGGTCTTGGTaGGAAGCGCCACAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSPPRSW*EAPQAS
Trigger: AGAGGCCTGTGGCGCTTCGCACCAAGACCTTGGCGG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCATGTTAGCCTTTTACTaGAGGGCCCACTTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCMLAFY*RAHLER
Trigger: CCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACAT...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTCAGGTACCAAGACAGTaGCACCGCCCGCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLQVPRQ*HRPRLR
Trigger: CCGGAGGCGCGGGCGGTGCCACTGTCTTGGTACCTG...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344624.8
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAAGTTTGAGAAAGTGGTaGAAGGGGCACTTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPSLRKW*KGHLEV
Trigger: AACCTCCAAGTGCCCCTTCCACCACTTTCTCAAACT...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAATTAGGACAAGGCATTaGTGGTGGCATGGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPIRTRH*WWHGRK
Trigger: TTTCCTCCCATGCCACCACCAATGCCTTGTCCTAAT...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCACATTCTTGTCAGGCATaGTCTCCTCGGGCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPHSCQA*SPRALF
Trigger: AAAAAGAGCCCGAGGAGACCATGCCTGACAAGAATG...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAGGTCCATCATTCATCTaGCCTGGATCGTTGTACCAA +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPGPSFI*PGSLYQ
Trigger: TTGGTACAACGATCCAGGCCAGATGAATGATGGACC...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTGGCCTAGGGTCAGATaGTTAAATCCCACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCWPRVR*LNPTVL
Trigger: GAGAACTGTGGGATTTAACCATCTGACCCTAGGCCA...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGGCTCCTCCGCTACCTTaGCCTGAGTTCTATTATTCA +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLAPPLP*PEFYYS
Trigger: TGAATAATAGAACTCAGGCCAAGGTAGCGGAGGAGC...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGTCTTGGTCTTGTCGTTaGTTATGGCGTACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLSWSCR*LWRTPA
Trigger: TGCAGGAGTACGCCATAACCAACGACAAGACCAAGA...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCGGTCCGCCAAGGTCTTaGTGCGAAGCGCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICGPPRS*CEAPQA
Trigger: GGCCTGTGGCGCTTCGCACCAAGACCTTGGCGGACC...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCACGCTTGCTGAATACTTaGTCCTTTCCCACAGCCTAT +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPRLLNT*SFPTAY
Trigger: ATAGGCTGTGGGAAAGGACCAAGTATTCAGCAAGCG...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCGTCTTCAGTCTCATCTaGCTCTCTCTCTTGATGCTC +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCVFSLI*LSLLML
Trigger: GAGCATCAAGAGAGAGAGCCAGATGAGACTGAAGAC...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGAACTGGGAAGGGGTaGCTCATCTGGTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGTGKG*LIWWLG
Trigger: CCCCAACCACCAGATGAGGCACCCCTTCCCAGTTCC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGTACAGGAGAATCTGGTaGATGGACAGCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLYRRIW*MDSTSF
Trigger: AAAGGAAGTGCTGTCCATGCACCAGATTCTCCTGTA...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAGCCTTTGCATTCTTCTaGATATTTCTGCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPAFAFF*IFLPLQ
Trigger: CTGGAGTGGCAGAAATATGCAGAAGAATGCAAAGGC...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCCAATGTGAATGCCCTTaGCAGAAGTCGAACATGAGT +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCQCECP*QKSNMS
Trigger: ACTCATGTTCGACTTCTGGCAAGGGCATTCACATTG...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCAATGTGAATGCCCTTaGCAGAAGTCGAACATGAGT +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLQCECP*QKSNMS
Trigger: ACTCATGTTCGACTTCTGGCAAGGGCATTCACATTG...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAAGTTCTCAATGTGAATaGCCTTGCCAGAAGTCGAAC +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPSSQCE*PCQKSN
Trigger: GTTCGACTTCTGGCAAGGGCATTCACATTGAGAACT...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATGGCGTACTCCTGCATaGCCAGCTCCTCCGCTACCT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSWRTPA*PAPPLP
Trigger: AGGTAGCGGAGGAGCTGGGCATGCAGGAGTACGCCA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACCCGCCAAGGTCTTGGTaGGAAGCGCCACAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHPPRSW*EAPQAS
Trigger: AGAGGCCTGTGGCGCTTCGCACCAAGACCTTGGCGG...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCGGTGGAAGGGGCACTTaGAGGTTCATATTGATATTG +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCGGRGT*RFILIL
Trigger: CAATATCAATATGAACCTCCAAGTGCCCCTTCCACC...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAAGGGGTGCCTCATCTaGTGGTTGGGGAAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSKGCLI*WLGKGG
Trigger: GCCGCCTTTCCCCAACCACCAGATGAGGCACCCCTT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGGATACGGACAGAGCTTaGTTTCGTCCCAGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLDTDRA*FRPRVG
Trigger: ACCAACCCTGGGACGAAACCAAGCTCTGTCCGTATC...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCGGGCGTATCCCAAAGTaGACGATAATCGGAAAAGTA +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCGRIPK*TIIGKV
Trigger: TACTTTTCCGATTATCGTCCACTTTGGGATACGCCC...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGGGGCGTATCCCAAAGTaGACGATAATCGGAAAAGTA +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLGRIPK*TIIGKV
Trigger: TACTTTTCCGATTATCGTCCACTTTGGGATACGCCC...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAGTTTTCCAGAATCCTTaGCTACTTAGCTCCACCGTT +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPVFQNP*LLSSTV
Trigger: AACGGTGGAGCTAAGTAGCCAAGGATTCTGGAAAAC...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGTTCGGGCATGGGATaGGCCCACTGTCTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGSGMG*AHCLQS
Trigger: ACTCTGCAGACAGTGGGCCCATCCCATGCCCGAACC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACCTAAAGGATGGTGCTaGGGGTCTGGCTCCATGTCC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSPKGWC*GSGSMS
Trigger: GGACATGGAGCCAGACCCTCAGCACCATCCTTTAGG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGGGAGGGGGCATCATaGAGGGGAAAGTGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSREGAS*RGKCLV
Trigger: GACAAGGCACTTTCCCCTTCATGATGCCCCCTCCCT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCCGGGCTCTTTTTCCTTaGTTGAGGTATAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCRALFP*LRYSSC
Trigger: ACAAGAACTATACCTCAATCAAGGAAAAAGAGCCCG...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGTTACAAAACGTGGCATaGAATGAAATCTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLLQNVA*NEILGS
Trigger: GCTGCCCAAGATTTCATTTCATGCCACGTTTTGTAA...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCATCTTGGCCAAGGCGTaGCATGATATTTATCAAGGT +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCILAKA*HDIYQG
Trigger: ACCTTGATAAATATCATGTCACGCCTTGGCCAAGAT...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGCCACAGTTCTCAATGTaGATGCCCTTGCCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLPQFSM*MPLPEV
Trigger: GACTTCTGGCAAGGGCATTCACATTGAGAACTGTGG...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGCCCATTTCCGCTTGCTaGATACTTGGTCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLPISAC*ILGPFP
Trigger: TGGGAAAGGACCAAGTATTCAGCAAGCGGAAATGGG...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATGCTCCGTTCGTAGCTaGGGTGGCGAGATGGTGTTC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSCSVRS*GGEMVF
Trigger: GAACACCATCTCGCCACCGCAGCTACGAACGGAGCA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCAGTTTTCTGAATGAGTaGATCGAATCCACACAGGCT +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCSFLNE*IESTQA
Trigger: AGCCTGTGTGGATTCGATGCACTCATTCAGAAAACT...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGGCACCAGGGCTTTGCTaGACCTTAACAAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLAPGLC*TLTSTG
Trigger: TCCTGTACTTGTTAAGGTGCAGCAAAGCCCTGGTGC...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGAAAACAATTGGCCATTaGATGTCGAAGGTCCGATTC +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLKTIGH*MSKVRF
Trigger: GAATCGGACCTTCGACATGCAATGGCCAATTGTTTT...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGTTATGGCGTACTCCTaGATGCCCAGCTCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSVMAYS*MPSSSA
Trigger: AGCGGAGGAGCTGGGCATGCAGGAGTACGCCATAAC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAATGGTGCTGAGGGTCTaGCTCCATGTCCTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSMVLRV*LHVLLV
Trigger: GACGAGGAGGACATGGAGCCAGACCCTCAGCACCAT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCAAGGGGTGCCTCATCTaGTGGTTGGGGAAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICKGCLI*WLGKGG
Trigger: GCCGCCTTTCCCCAACCACCAGATGAGGCACCCCTT...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGGTGCCCCAGGGACTaGGGGGTTATTAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSRCPRD*GVIRTR
Trigger: CCTTGTCCTAATAACCCCCCAGTCCCTGGGGCACCT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACTCACTGGGAGCCTTTaGGAGTGGGTATGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSLTGSL*EWVWRE
Trigger: CTCCCTCCATACCCACTCCCAAAGGCTCCCAGTGAG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGGACCTTCTCTCACTaGGAGCCTTTGGGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGTFSH*EPLGVG
Trigger: ACCCACTCCCAAAGGCTCCCAGTGAGAGAAGGTCCC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGCTGCGGTGGCGAGATaGTGTTCTCCCTCGGTCATA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSAAVAR*CSPSVI
Trigger: TATGACCGAGGGAGAACACCATCTCGCCACCGCAGC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCGATCCATGGGGTCACTaGAGTAGTAGTTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCDPWGH*SSSFLN
Trigger: ATTCAGAAAACTACTACTCCAGTGACCCCATGGATC...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGGACTTGGATGAGTCATaGCCAGCTGCAACAGACAAC +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLDLDES*PAATDN
Trigger: GTTGTCTGTTGCAGCTGGCCATGACTCATCCAAGTC...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGGGAGTTGGGTCATCTTaGCCAAGGCGTGACATGATA +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLGVGSS*PRRDMI
Trigger: TATCATGTCACGCCTTGGCCAAGATGACCCAACTCC...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCGTTTCTTTGCTAGCATaGCAAGGTGCTGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCVSLLA*QGADSE
Trigger: TTCAGAATCAGCACCTTGCCATGCTAGCAAAGAAAC...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAACGCTTCAAAACAATTaGCCATTGCATGTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPTLQNN*PLHVEG
Trigger: ACCTTCGACATGCAATGGCCAATTGTTTTGAAGCGT...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGATGGAGGGAGATGTCTaGAATGAGGACTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLMEGDV*NEDYCC
Trigger: ACAGCAGTAGTCCTCATTTCAGACATCTCCCTCCAT...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGTGTTCACGATCCAGTTaGTCGATACGGACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLCSRSS*SIRTEL
Trigger: AAGCTCTGTCCGTATCGATCAACTGGATCGTGAACA...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGTGGAGAGGATAATTaGGCCAGACTTCGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGGEDN*ARLRAG
Trigger: ACCTGCGCGAAGTCTGGCTCAATTATCCTCTCCACC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAAACAGTCACAGTTACTaGGCAAGTAAATACTCCACA +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPNSHSY*ASKYST
Trigger: TGTGGAGTATTTACTTGCTCAGTAACTGTGACTGTT...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTGGAACTGGGAAGGGGTaGCTCATCTGGTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLGTGKG*LIWWLG
Trigger: CCCCAACCACCAGATGAGGCACCCCTTCCCAGTTCC...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCATATAGTTCTTGTCTTTaGCAGAACTCTGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPYSSCL*QNSGCH
Trigger: GTGACAACCAGAGTTCTGGCAAAGACAAGAACTATA...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGCTTTGGCCTTTTCTTaGCTGCTCCCCAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSALAFS*LLPNSS
Trigger: GGAGGAGTTGGGGAGCAGGCAAGAAAAGGCCAAAGC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACATGGTGCTGAGGGTCTaGCTCCATGTCCTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHMVLRV*LHVLLV
Trigger: GACGAGGAGGACATGGAGCCAGACCCTCAGCACCAT...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGAGTTTGAGAAAGTGGTaGAAGGGGCACTTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLSLRKW*KGHLEV
Trigger: AACCTCCAAGTGCCCCTTCCACCACTTTCTCAAACT...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGATTAAAACTGGGAGGTaGGAAGTTGTGGTGAGAATA +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLIKTGR*EVVVRI
Trigger: TATTCTCACCACAACTTCCCACCTCCCAGTTTTAAT...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGGAGCCTTTGGGAGTaGGTATGGAGGGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGSLWE*VWREMS
Trigger: AGACATCTCCCTCCATACCCACTCCCAAAGGCTCCC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACCTCACTGGGAGCCTTTaGGAGTGGGTATGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHLTGSL*EWVWRE
Trigger: CTCCCTCCATACCCACTCCCAAAGGCTCCCAGTGAG...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAATCCTCGAGGGAGTTaGGTCATCTTGGCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSNPRGS*VILAKA
Trigger: CGCCTTGGCCAAGATGACCCAACTCCCTCGAGGATT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGTCTTGGTCTTGTCGTTaGTTATGGCGTACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLSWSCR*LWRTPA
Trigger: TGCAGGAGTACGCCATAACCAACGACAAGACCAAGA...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATACCAAAGTTCATCATaGAGTCGGTCAGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSYQSSS*SRSGWA
Trigger: GGCCCACCCTGACCGACTTCATGATGAACTTTGGTA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGGCATCATCTCTTCAATaGAATGAATCGTGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLASSLQ*NESCSL
Trigger: TAGACTACACGATTCATTTCATTGAAGAGATGATGC...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCGCATCATCTCTTCAATaGAATGAATCGTGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: CRAHLERLIKAINPPPSCASSLQ*NESCSL
Trigger: TAGACTACACGATTCATTTCATTGAAGAGATGATGC...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATCCAGCTCCTCCCACTaGAGCATATTGGCAATCTCC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSSSSH*SILAIS
Trigger: GGAGATTGCCAATATGCTTCAGTGGGAGGAGCTGGA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGTCAAGCAACACTGCTaGAGCTGGGATTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSVKQHC*SWDLGS
Trigger: TGACCCCAAATCCCAGCTTCAGCAGTGTTGCTTGAC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATCGATGAACCGCTTCTaGTGGGCCATCTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSMNRF*WAIWGK
Trigger: TTTTCCCCAGATGGCCCATCAGAAGCGGTTCATCGA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATGTACTTCCGTTCGATaGACCGCTTCTGATGGGCCA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSCTSVR*TASDGP
Trigger: TGGCCCATCAGAAGCGGTTCATCGAACGGAAGTACA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTTGCTCCGTTCGTAGCTaGGGTGGCGAGATGGTGTTC +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLCSVRS*GGEMVF
Trigger: GAACACCATCTCGCCACCGCAGCTACGAACGGAGCA...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACTTCGGTTGTCTCGATaGCTGTGTCTCTCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSLRLSR*LCLSRS
Trigger: AGAACGGGAGAGACACAGGCATCGAGACAACCGAAG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGCTTCCTCCCTCTGTaGCAGCTTCTGTTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGFLPL*QLLFVS
Trigger: ACTGACAAACAGAAGCTGGCACAGAGGGAGGAAGCC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGATGGGCCCACTGTCTaGAGAGTCTTGTACAGAGGA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSDGPTV*RVLYRG
Trigger: TCCTCTGTACAAGACTCTGCAGACAGTGGGCCCATC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAAGCGCATCCATTGCTaGTCCCATTTCCGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSKRIHC*SHFRLL
Trigger: CAGCAAGCGGAAATGGGAGCAGCAATGGATGCGCTT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGGAAGGGTACAAAGTCTaGTCGTGGAGGGAGAAAATT +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLEGYKV*SWREKI
Trigger: AATTTTCTCCCTCCACGACCAGACTTTGTACCCTTC...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAGAACTAGGGTTGTTCTaGAAACTATTAAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPELGLF*KLLKLG
Trigger: TCCCAGTTTTAATAGTTTCCAGAACAACCCTAGTTC...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGTGTTTCAGCCTTTCTaGGGACCTTCTCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSVFQPF*GPSLTG
Trigger: CCCAGTGAGAGAAGGTCCCCAGAAAGGCTGAAACAC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACTCCCACCTGATCCATaGGGTCACTGGAGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSLPPDP*GHWSSS
Trigger: ACTACTACTCCAGTGACCCCATGGATCAGGTGGGAG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCATTCCTTTCCTCCATCTaGAAGAAATCTTACAAAACG +
Preference number: 4 (lower is better)
Translates to: AHLERLIKAINPPPSCSPFLSSI*KKSYKT
Trigger: CGTTTTGTAAGATTTCTTCCAGATGGAGGAAAGGAA...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGATACGGACAGAGCTTaGTTTCGTCCCAGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSDTDRA*FRPRVG
Trigger: ACCAACCCTGGGACGAAACCAAGCTCTGTCCGTATC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCAATCCTCGAGGGAGTTaGGTCATCTTGGCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICNPRGS*VILAKA
Trigger: CGCCTTGGCCAAGATGACCCAACTCCCTCGAGGATT...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACAGGGTGAGAGCACTTaGTTTAAAGTGTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSQGEST*FKVWPG
Trigger: GCCAGGCCACACTTTAAACCAAGTGCTCTCACCCTG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGGGGAGATGTCTGAAATaGGGACTACTGCTGTTATTA +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLGRCLK*GLLLLL
Trigger: TAATAACAGCAGTAGTCCTCATTTCAGACATCTCCC...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCCTACTTGGGGAGCGATaGTTCACAATCTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICLLGER*FTISRG
Trigger: ACCCCTGGAGATTGTGAATCATCGCTCCCCAAGTAG...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGTACCAAAGTTCATCATaGAGTCGGTCAGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLYQSSS*SRSGWA
Trigger: GGCCCACCCTGACCGACTTCATGATGAACTTTGGTA...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGTCCAGCTCCTCCCACTaGAGCATATTGGCAATCTCC +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLSSSSH*SILAIS
Trigger: GGAGATTGCCAATATGCTTCAGTGGGAGGAGCTGGA...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACAAAGGTCAGGCCCGTaGGCATACAGCATAAATCGA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSQRSGP*AYSINR
Trigger: TCGATTTATGCTGTATGCTCACGGGCCTGACCTTTG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTGGTGGAGAGGATAATTaGGCCAGACTTCGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLGGEDN*ARLRAG
Trigger: ACCTGCGCGAAGTCTGGCTCAATTATCCTCTCCACC...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACCACAGTTCTCAATGTaGATGCCCTTGCCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSPQFSM*MPLPEV
Trigger: GACTTCTGGCAAGGGCATTCACATTGAGAACTGTGG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGGTCAAGCAACACTGCTaGAGCTGGGATTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLVKQHC*SWDLGS
Trigger: TGACCCCAAATCCCAGCTTCAGCAGTGTTGCTTGAC...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACGTCAAGCAACACTGCTaGAGCTGGGATTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHVKQHC*SWDLGS
Trigger: TGACCCCAAATCCCAGCTTCAGCAGTGTTGCTTGAC...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACCCATTTCCGCTTGCTaGATACTTGGTCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSPISAC*ILGPFP
Trigger: TGGGAAAGGACCAAGTATTCAGCAAGCGGAAATGGG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGTCTTGCCTTTGCGCTaGATTTGCAGAGTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSVLPLR*ICRVVH
Trigger: ATGGACCACTCTGCAAATGCAGCGCAAAGGCAAGAC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGCACCAGGGCTTTGCTaGACCTTAACAAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSAPGLC*TLTSTG
Trigger: TCCTGTACTTGTTAAGGTGCAGCAAAGCCCTGGTGC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACAGGCACCAGGGCTTTaGTGCACCTTAACAAGTACA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSQAPGL*CTLTST
Trigger: TGTACTTGTTAAGGTGCAGCAAAGCCCTGGTGCCTG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATCTTCTGCATATTTCTaGCACTCCAGCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSSAYF*HSSSSH
Trigger: GTGGGAGGAGCTGGAGTGGCAGAAATATGCAGAAGA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGTACTGTGGGTCTCCTaGATAACTCAACTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSVLWVS*ITQLCR
Trigger: CCTGCACAGTTGAGTTATGCAGGAGACCCACAGTAC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGAGACATCAGAACGGATaGCAGTTTTCCAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLRHQNG*QFSRIL
Trigger: AAGGATTCTGGAAAACTGGCATCCGTTCTGATGTCT...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACAAGCGCATCCATTGCTaGTCCCATTTCCGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHKRIHC*SHFRLL
Trigger: CAGCAAGCGGAAATGGGAGCAGCAATGGATGCGCTT...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATTCAAGCGCATCCATTaGTGCTCCCATTTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSFKRIH*CSHFRL
Trigger: CAAGCGGAAATGGGAGCAGCAATGGATGCGCTTGAA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGCAGCCTCAGATTTTaGGGCCTAAAGGATGGTGCT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSSLRF*GLKDGA
Trigger: AGCACCATCCTTTAGGCCCCAAAATCTGAGGCTGCT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGAGAGTTTGAGAAAGTaGTGGAAGGGGCACTTGGAG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSESLRK*WKGHLE
Trigger: CTCCAAGTGCCCCTTCCACCACTTTCTCAAACTCTC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGTGGAGGGAGAAAATTaGGGGCTGGAGAGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSVEGEN*GLESLR
Trigger: TCTCAAACTCTCCAGCCCCCAATTTTCTCCCTCCAC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATACAAAGTCTGGTCGTaGAGGGAGAAAATTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSYKVWS*REKIGG
Trigger: GCCCCCAATTTTCTCCCTCCACGACCAGACTTTGTA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAAAACAAGGAGGAACTaGGAAGGGGTGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSKTRRN*EGVPHL
Trigger: CAGATGAGGCACCCCTTCCCAGTTCCTCCTTGTTTT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGCATTGGTGGTGGCATaGGAGGAAAACAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSALVVA*EENKEE
Trigger: TTCCTCCTTGTTTTCCTCCCATGCCACCACCAATGC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAACAAGGCATTGGTGGTaGCATGGGAGGAAAACAAGG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSTRHWW*HGRKTR
Trigger: CCTTGTTTTCCTCCCATGCCACCACCAATGCCTTGT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGGACAAGGCATTGGTaGTGGCATGGGAGGAAAACA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSRTRHW*WHGRKT
Trigger: TGTTTTCCTCCCATGCCACCACCAATGCCTTGTCCT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTGGGAGCCTTTGGGAGTaGGTATGGAGGGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLGSLWE*VWREMS
Trigger: AGACATCTCCCTCCATACCCACTCCCAAAGGCTCCC...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGAGAATCTGGTGCATaGACAGCACTTCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGESGA*TALPFL
Trigger: GAGGAAAGGAAGTGCTGTCCATGCACCAGATTCTCC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACCCACTGAAGCATATTaGCAATCTCCTCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSPTEAY*QSPPQA
Trigger: TGCCTGAGGAGGAGATTGCCAATATGCTTCAGTGGG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGAACAGACAACGATCTTaGAAAGTATATCCTATCAAC +
Preference number: 4 (lower is better)
Translates to: LQGPLREADKSYKPSSFLNRQRS*KVYPIN
Trigger: GTTGATAGGATATACTTTCCAAGATCGTTGTCTGTT...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGACTTGGATGAGTCATaGCCAGCTGCAACAGACAAC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSDLDES*PAATDN
Trigger: GTTGTCTGTTGCAGCTGGCCATGACTCATCCAAGTC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGAGTTGGGTCATCTTaGCCAAGGCGTGACATGATA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGVGSS*PRRDMI
Trigger: TATCATGTCACGCCTTGGCCAAGATGACCCAACTCC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGTCCAAATAACTGCTTaGCTTCCTCCAGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSVQITA*LPPGFP
Trigger: AGGGAAGCCTGGAGGAAGCCAAGCAGTTATTTGGAC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATCTTGTCGTTGGTTATaGCGTACTCCTGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSCRWL*RTPACP
Trigger: TGGGCATGCAGGAGTACGCCATAACCAACGACAAGA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACTTCTTCTCCCTACTTaGGGAGCGACTTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSLLLPT*GATSRS
Trigger: AGATCTGGAAGTCGCTCCCCAAGTAGGGAGAAGAAG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513349.5
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATGTTTCCCTGCATCATaGTGTTCCGCCTGGATATGT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSCFPAS*CSAWIC
Trigger: ACATATCCAGGCGGAACATCATGATGCAGGGAAACA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAATGGAGGGAGATGTCTaGAATGAGGACTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSMEGDV*NEDYCC
Trigger: ACAGCAGTAGTCCTCATTTCAGACATCTCCCTCCAT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATGTTCACGATCCAGTTaGTCGATACGGACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSCSRSS*SIRTEL
Trigger: AAGCTCTGTCCGTATCGATCAACTGGATCGTGAACA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGCATCATTGCATGCTaGCAGACATCAGAACGGATG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSIIAC*QTSERM
Trigger: CATCCGTTCTGATGTCTGTCAGCATGCAATGATGCT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCCAAAGGTCAGGCCCGTaGGCATACAGCATAAATCGA +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICQRSGP*AYSINR
Trigger: TCGATTTATGCTGTATGCTCACGGGCCTGACCTTTG...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGGAATTCCATTCTCTaGTTGTGGCCTAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSRNSIL*LWPRVR
Trigger: TCTGACCCTAGGCCACAATCAGAGAATGGAATTCCT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACAGCGCTGCAATAAATaGTTCCAAAAGGTCCGCCAA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSQRCNK*FQKVRQ
Trigger: TTGGCGGACCTTTTGGAATCATTTATTGCAGCGCTG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCCCCATTTCCGCTTGCTaGATACTTGGTCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICPISAC*ILGPFP
Trigger: TGGGAAAGGACCAAGTATTCAGCAAGCGGAAATGGG...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACTGTCTCTTCTCGGTTaGGGTTTGGAAACAGAGACA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSLSLLG*GLETET
Trigger: TGTCTCTGTTTCCAAACCGCAACCGAGAAGAGACAG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000513349.5
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACCTTTGCGCTGCATTTaGAGAGTGGTCCATCATTCA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSPLRCI*RVVHHS
Trigger: TGAATGATGGACCACTCTGCAAATGCAGCGCAAAGG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCGTCTTGCCTTTGCGCTaGATTTGCAGAGTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICVLPLR*ICRVVH
Trigger: ATGGACCACTCTGCAAATGCAGCGCAAAGGCAAGAC...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAATTCCTGTGCGTCTTaGCTTTGCGCTGCATTTGCA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSNSCAS*LCAAFA
Trigger: TGCAAATGCAGCGCAAAGGCAAGACGCACAGGAATT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCGCACCAGGGCTTTGCTaGACCTTAACAAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICAPGLC*TLTSTG
Trigger: TCCTGTACTTGTTAAGGTGCAGCAAAGCCCTGGTGC...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGCAGGCACCAGGGCTTTaGTGCACCTTAACAAGTACA +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLQAPGL*CTLTST
Trigger: TGTACTTGTTAAGGTGCAGCAAAGCCCTGGTGCCTG...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCCAGGCACCAGGGCTTTaGTGCACCTTAACAAGTACA +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICQAPGL*CTLTST
Trigger: TGTACTTGTTAAGGTGCAGCAAAGCCCTGGTGCCTG...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCTCTTCTGCATATTTCTaGCACTCCAGCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICSSAYF*HSSSSH
Trigger: GTGGGAGGAGCTGGAGTGGCAGAAATATGCAGAAGA...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATGCATAACTCAACTGTaGAGGGCGTATCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSCITQL*RAYPKV
Trigger: CACTTTGGGATACGCCCTGCACAGTTGAGTTATGCA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAAGCGTCCAAATAACTaGTTGGCTTCCTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSKRPNN*LASSRL
Trigger: AAGCCTGGAGGAAGCCAAGCAGTTATTTGGACGCTT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATCTGTGGCTACCAGTTaGATTATGGAGTCACCTAGG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSVATS*IMESPR
Trigger: CCTAGGTGACTCCATAATGCAACTGGTAGCCACAGA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGACTTCATTCATTGTCTaGAGGAAAACTAGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLTSFIV*RKTRLG
Trigger: ACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACCCTTCCTGCTCCCCATaGCCTCTCAAATCTCAAACA +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHPSCSP*PLKSQT
Trigger: TGTTTGAGATTTGAGAGGGCATGGGGAGCAGGAAGG...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAATGTTAGCCTTTTACTaGAGGGCCCACTTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSMLAFY*RAHLER
Trigger: CCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACAT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGTTTGAGAAAGTGGTaGAAGGGGCACTTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSLRKW*KGHLEV
Trigger: AACCTCCAAGTGCCCCTTCCACCACTTTCTCAAACT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCGAGAGTTTGAGAAAGTaGTGGAAGGGGCACTTGGAG +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICESLRK*WKGHLE
Trigger: CTCCAAGTGCCCCTTCCACCACTTTCTCAAACTCTC...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGGTGGAGGGAGAAAATTaGGGGCTGGAGAGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLVEGEN*GLESLR
Trigger: TCTCAAACTCTCCAGCCCCCAATTTTCTCCCTCCAC...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCTACAAAGTCTGGTCGTaGAGGGAGAAAATTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICYKVWS*REKIGG
Trigger: GCCCCCAATTTTCTCCCTCCACGACCAGACTTTGTA...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACAAAACAAGGAGGAACTaGGAAGGGGTGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHKTRRN*EGVPHL
Trigger: CAGATGAGGCACCCCTTCCCAGTTCCTCCTTGTTTT...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACACAAGGCATTGGTGGTaGCATGGGAGGAAAACAAGG +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHTRHWW*HGRKTR
Trigger: CCTTGTTTTCCTCCCATGCCACCACCAATGCCTTGT...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCACAAGGCATTGGTGGTaGCATGGGAGGAAAACAAGG +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICTRHWW*HGRKTR
Trigger: CCTTGTTTTCCTCCCATGCCACCACCAATGCCTTGT...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGAGGACAAGGCATTGGTaGTGGCATGGGAGGAAAACA +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLRTRHW*WHGRKT
Trigger: TGTTTTCCTCCCATGCCACCACCAATGCCTTGTCCT...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAATTAGGACAAGGCATTaGTGGTGGCATGGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSIRTRH*WWHGRK
Trigger: TTTCCTCCCATGCCACCACCAATGCCTTGTCCTAAT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGATTAAAACTGGGAGGTaGGAAGTTGTGGTGAGAATA +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLIKTGR*EVVVRI
Trigger: TATTCTCACCACAACTTCCCACCTCCCAGTTTTAAT...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTGTGTTTCAGCCTTTCTaGGGACCTTCTCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLVFQPF*GPSLTG
Trigger: CCCAGTGAGAGAAGGTCCCCAGAAAGGCTGAAACAC...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACATTCTTGTCAGGCATaGTCTCCTCGGGCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSHSCQA*SPRALF
Trigger: AAAAAGAGCCCGAGGAGACCATGCCTGACAAGAATG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGTCCATCATTCATCTaGCCTGGATCGTTGTACCAA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGPSFI*PGSLYQ
Trigger: TTGGTACAACGATCCAGGCCAGATGAATGATGGACC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACGGAGAATCTGGTGCATaGACAGCACTTCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHGESGA*TALPFL
Trigger: GAGGAAAGGAAGTGCTGTCCATGCACCAGATTCTCC...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAAGTACAGGAGAATCTaGTGCATGGACAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSKYRRI*CMDSTS
Trigger: GGAAGTGCTGTCCATGCACCAGATTCTCCTGTACTT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCCCCACTGAAGCATATTaGCAATCTCCTCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICPTEAY*QSPPQA
Trigger: TGCCTGAGGAGGAGATTGCCAATATGCTTCAGTGGG...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACGACTTGGATGAGTCATaGCCAGCTGCAACAGACAAC +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHDLDES*PAATDN
Trigger: GTTGTCTGTTGCAGCTGGCCATGACTCATCCAAGTC...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATTCTGTCTCCGTATTTaGGCTGCCGAATTCCACAGT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSFCLRI*AAEFHS
Trigger: ACTGTGGAATTCGGCAGCCCAAATACGGAGACAGAA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCGTCCAAATAACTGCTTaGCTTCCTCCAGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICVQITA*LPPGFP
Trigger: AGGGAAGCCTGGAGGAAGCCAAGCAGTTATTTGGAC...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATGGCCTAGGGTCAGATaGTTAAATCCCACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSWPRVR*LNPTVL
Trigger: GAGAACTGTGGGATTTAACCATCTGACCCTAGGCCA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGCTCCTCCGCTACCTTaGCCTGAGTTCTATTATTCA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSAPPLP*PEFYYS
Trigger: TGAATAATAGAACTCAGGCCAAGGTAGCGGAGGAGC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCTCTTGTCGTTGGTTATaGCGTACTCCTGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICSCRWL*RTPACP
Trigger: TGGGCATGCAGGAGTACGCCATAACCAACGACAAGA...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGTCTTGTCGTTGGTTATaGCGTACTCCTGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLSCRWL*RTPACP
Trigger: TGGGCATGCAGGAGTACGCCATAACCAACGACAAGA...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATCTTGGTCTTGTCGTTaGTTATGGCGTACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSWSCR*LWRTPA
Trigger: TGCAGGAGTACGCCATAACCAACGACAAGACCAAGA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGCTGAAGCTGGGATTTaGGGTCATTCCAATCCTGAT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSAEAGI*GHSNPD
Trigger: ATCAGGATTGGAATGACCCCAAATCCCAGCTTCAGC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACGCTTGCTGAATACTTaGTCCTTTCCCACAGCCTAT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSRLLNT*SFPTAY
Trigger: ATAGGCTGTGGGAAAGGACCAAGTATTCAGCAAGCG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGTCTTCAGTCTCATCTaGCTCTCTCTCTTGATGCTC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSVFSLI*LSLLML
Trigger: GAGCATCAAGAGAGAGAGCCAGATGAGACTGAAGAC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGTGTTTCCCTGCATCATaGTGTTCCGCCTGGATATGT +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLCFPAS*CSAWIC
Trigger: ACATATCCAGGCGGAACATCATGATGCAGGGAAACA...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAAAAACTTCAGAGTCTaGGCTGCTAGAACAGGTGCT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSKNFRV*AARTGA
Trigger: AGCACCTGTTCTAGCAGCTCAGACTCTGAAGTTTTT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGAGGAATTCCATTCTCTaGTTGTGGCCTAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLRNSIL*LWPRVR
Trigger: TCTGACCCTAGGCCACAATCAGAGAATGGAATTCCT...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCCAGCGCTGCAATAAATaGTTCCAAAAGGTCCGCCAA +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICQRCNK*FQKVRQ
Trigger: TTGGCGGACCTTTTGGAATCATTTATTGCAGCGCTG...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGCTGTCTCTTCTCGGTTaGGGTTTGGAAACAGAGACA +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLLSLLG*GLETET
Trigger: TGTCTCTGTTTCCAAACCGCAACCGAGAAGAGACAG...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344624.8
CDS-3UTR GCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGAATTCCTGTGCGTCTTaGCTTTGCGCTGCATTTGCA +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLNSCAS*LCAAFA
Trigger: TGCAAATGCAGCGCAAAGGCAAGACGCACAGGAATT...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCAATTCCTGTGCGTCTTaGCTTTGCGCTGCATTTGCA +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICNSCAS*LCAAFA
Trigger: TGCAAATGCAGCGCAAAGGCAAGACGCACAGGAATT...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATACAGGAGAATCTGGTaGATGGACAGCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSYRRIW*MDSTSF
Trigger: AAAGGAAGTGCTGTCCATGCACCAGATTCTCCTGTA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGCCTTTGCATTCTTCTaGATATTTCTGCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSAFAFF*IFLPLQ
Trigger: CTGGAGTGGCAGAAATATGCAGAAGAATGCAAAGGC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATCTCCGTATTTGGGCTaGCGAATTCCACAGTTAGAT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSPYLG*RIPQLD
Trigger: ATCTAACTGTGGAATTCGGCAGCCCAAATACGGAGA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACAAGCGTCCAAATAACTaGTTGGCTTCCTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHKRPNN*LASSRL
Trigger: AAGCCTGGAGGAAGCCAAGCAGTTATTTGGACGCTT...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACAATGTGAATGCCCTTaGCAGAAGTCGAACATGAGT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSQCECP*QKSNMS
Trigger: ACTCATGTTCGACTTCTGGCAAGGGCATTCACATTG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGTTCTCAATGTGAATaGCCTTGCCAGAAGTCGAAC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSSQCE*PCQKSN
Trigger: GTTCGACTTCTGGCAAGGGCATTCACATTGAGAACT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGCAGCCTCAGATTTTaGGGCCTAAAGGATGGTGCT +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLSSLRF*GLKDGA
Trigger: AGCACCATCCTTTAGGCCCCAAAATCTGAGGCTGCT...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGTGGAAGGGGCACTTaGAGGTTCATATTGATATTG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGGRGT*RFILIL
Trigger: CAATATCAATATGAACCTCCAAGTGCCCCTTCCACC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTGTGGAGGGAGAAAATTaGGGGCTGGAGAGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLVEGEN*GLESLR
Trigger: TCTCAAACTCTCCAGCCCCCAATTTTCTCCCTCCAC...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGAAGGGTACAAAGTCTaGTCGTGGAGGGAGAAAATT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSEGYKV*SWREKI
Trigger: AATTTTCTCCCTCCACGACCAGACTTTGTACCCTTC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCATTAGGACAAGGCATTaGTGGTGGCATGGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICIRTRH*WWHGRK
Trigger: TTTCCTCCCATGCCACCACCAATGCCTTGTCCTAAT...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGGAACTAGGGTTGTTCTaGAAACTATTAAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLELGLF*KLLKLG
Trigger: TCCCAGTTTTAATAGTTTCCAGAACAACCCTAGTTC...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGGGTCCATCATTCATCTaGCCTGGATCGTTGTACCAA +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLGPSFI*PGSLYQ
Trigger: TTGGTACAACGATCCAGGCCAGATGAATGATGGACC...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTGGAGAATCTGGTGCATaGACAGCACTTCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLGESGA*TALPFL
Trigger: GAGGAAAGGAAGTGCTGTCCATGCACCAGATTCTCC...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACAAGTACAGGAGAATCTaGTGCATGGACAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHKYRRI*CMDSTS
Trigger: GGAAGTGCTGTCCATGCACCAGATTCTCCTGTACTT...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGGCGTATCCCAAAGTaGACGATAATCGGAAAAGTA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGRIPK*TIIGKV
Trigger: TACTTTTCCGATTATCGTCCACTTTGGGATACGCCC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGTTTTCCAGAATCCTTaGCTACTTAGCTCCACCGTT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSVFQNP*LLSSTV
Trigger: AACGGTGGAGCTAAGTAGCCAAGGATTCTGGAAAAC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGTTCTGTCTCCGTATTTaGGCTGCCGAATTCCACAGT +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLFCLRI*AAEFHS
Trigger: ACTGTGGAATTCGGCAGCCCAAATACGGAGACAGAA...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATCCAACCGTTCATTGTaGTTAATCCTCGAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSNRSL*LILEGV
Trigger: AACTCCCTCGAGGATTAACCACAATGAACGGTTGGA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGCTGATTCTGAACAATaGCAGTCCGATAGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSADSEQ*QSDRLL
Trigger: TAGCAACCTATCGGACTGCCATTGTTCAGAATCAGC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGTGGCCTAGGGTCAGATaGTTAAATCCCACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLWPRVR*LNPTVL
Trigger: GAGAACTGTGGGATTTAACCATCTGACCCTAGGCCA...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGGCTCCTCCGCTACCTTaGCCTGAGTTCTATTATTCA +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLAPPLP*PEFYYS
Trigger: TGAATAATAGAACTCAGGCCAAGGTAGCGGAGGAGC...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCGCTGAAGCTGGGATTTaGGGTCATTCCAATCCTGAT +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICAEAGI*GHSNPD
Trigger: ATCAGGATTGGAATGACCCCAAATCCCAGCTTCAGC...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGCGCTTGCTGAATACTTaGTCCTTTCCCACAGCCTAT +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLRLLNT*SFPTAY
Trigger: ATAGGCTGTGGGAAAGGACCAAGTATTCAGCAAGCG...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTCTTGGAGGTTCATATTaGTATTGCACAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLLGGSY*YCTGGC
Trigger: GCAGCCTCCTGTGCAATATCAATATGAACCTCCAAG...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGGAGATGTCTGAAATaGGGACTACTGCTGTTATTA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGRCLK*GLLLLL
Trigger: TAATAACAGCAGTAGTCCTCATTTCAGACATCTCCC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACGGGCTCTTTTTCCTTaGTTGAGGTATAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSRALFP*LRYSSC
Trigger: ACAAGAACTATACCTCAATCAAGGAAAAAGAGCCCG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGAGTAGTAGTTTTCTaGATGAGTGCATCGAATCCA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGVVVF*MSASNP
Trigger: TGGATTCGATGCACTCATTCAGAAAACTACTACTCC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGAAAAACTTCAGAGTCTaGGCTGCTAGAACAGGTGCT +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLKNFRV*AARTGA
Trigger: AGCACCTGTTCTAGCAGCTCAGACTCTGAAGTTTTT...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATTACAAAACGTGGCATaGAATGAAATCTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSLQNVA*NEILGS
Trigger: GCTGCCCAAGATTTCATTTCATGCCACGTTTTGTAA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAATCTTGGCCAAGGCGTaGCATGATATTTATCAAGGT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSILAKA*HDIYQG
Trigger: ACCTTGATAAATATCATGTCACGCCTTGGCCAAGAT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGGAATTCCATTCTCTaGTTGTGGCCTAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLRNSIL*LWPRVR
Trigger: TCTGACCCTAGGCCACAATCAGAGAATGGAATTCCT...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGTTTTCTGAATGAGTaGATCGAATCCACACAGGCT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSFLNE*IESTQA
Trigger: AGCCTGTGTGGATTCGATGCACTCATTCAGAAAACT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCTACAGGAGAATCTGGTaGATGGACAGCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICYRRIW*MDSTSF
Trigger: AAAGGAAGTGCTGTCCATGCACCAGATTCTCCTGTA...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCGCCTTTGCATTCTTCTaGATATTTCTGCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICAFAFF*IFLPLQ
Trigger: CTGGAGTGGCAGAAATATGCAGAAGAATGCAAAGGC...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTTGCATAACTCAACTGTaGAGGGCGTATCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLCITQL*RAYPKV
Trigger: CACTTTGGGATACGCCCTGCACAGTTGAGTTATGCA...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGACATCAGAACGGATaGCAGTTTTCCAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSRHQNG*QFSRIL
Trigger: AAGGATTCTGGAAAACTGGCATCCGTTCTGATGTCT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACTCTCCGTATTTGGGCTaGCGAATTCCACAGTTAGAT +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHSPYLG*RIPQLD
Trigger: ATCTAACTGTGGAATTCGGCAGCCCAAATACGGAGA...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGTCTCCGTATTTGGGCTaGCGAATTCCACAGTTAGAT +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLSPYLG*RIPQLD
Trigger: ATCTAACTGTGGAATTCGGCAGCCCAAATACGGAGA...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAAAACAATTGGCCATTaGATGTCGAAGGTCCGATTC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSKTIGH*MSKVRF
Trigger: GAATCGGACCTTCGACATGCAATGGCCAATTGTTTT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCAGTTCTCAATGTGAATaGCCTTGCCAGAAGTCGAAC +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICSSQCE*PCQKSN
Trigger: GTTCGACTTCTGGCAAGGGCATTCACATTGAGAACT...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTTCTGTGGCTACCAGTTaGATTATGGAGTCACCTAGG +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLSVATS*IMESPR
Trigger: CCTAGGTGACTCCATAATGCAACTGGTAGCCACAGA...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGGGTGGAAGGGGCACTTaGAGGTTCATATTGATATTG +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLGGRGT*RFILIL
Trigger: CAATATCAATATGAACCTCCAAGTGCCCCTTCCACC...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCCTTCTTCTCCCTACTTaGGGAGCGATGATTCACAAT +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICLLLPT*GAMIHN
Trigger: ATTGTGAATCATCGCTCCCCAAGTAGGGAGAAGAAG...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGATCCATGGGGTCACTaGAGTAGTAGTTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSDPWGH*SSSFLN
Trigger: ATTCAGAAAACTACTACTCCAGTGACCCCATGGATC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAATCATTCATCTGGCCTaGATCGTTGTACCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSIIHLA*IVVPKF
Trigger: GAACTTTGGTACAACGATCCAGGCCAGATGAATGAT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAAGTACAGGAGAATCTaGTGCATGGACAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLKYRRI*CMDSTS
Trigger: GGAAGTGCTGTCCATGCACCAGATTCTCCTGTACTT...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACAGTTTTTGGTACTGTaGGTCTCCTGCATAACTCAA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSQFLVL*VSCITQ
Trigger: TTGAGTTATGCAGGAGACCCACAGTACCAAAAACTG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGGTTTTCCAGAATCCTTaGCTACTTAGCTCCACCGTT +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLVFQNP*LLSSTV
Trigger: AACGGTGGAGCTAAGTAGCCAAGGATTCTGGAAAAC...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCTCCAACCGTTCATTGTaGTTAATCCTCGAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICSNRSL*LILEGV
Trigger: AACTCCCTCGAGGATTAACCACAATGAACGGTTGGA...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGGCTGATTCTGAACAATaGCAGTCCGATAGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLADSEQ*QSDRLL
Trigger: TAGCAACCTATCGGACTGCCATTGTTCAGAATCAGC...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGTTTCTTTGCTAGCATaGCAAGGTGCTGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSVSLLA*QGADSE
Trigger: TTCAGAATCAGCACCTTGCCATGCTAGCAAAGAAAC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAACGCTTCAAAACAATTaGCCATTGCATGTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSTLQNN*PLHVEG
Trigger: ACCTTCGACATGCAATGGCCAATTGTTTTGAAGCGT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACTACCAGTTGCATTATaGAGTCACCTAGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSLPVAL*SHLGIP
Trigger: TGGAATTCCTAGGTGACTCCATAATGCAACTGGTAG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTGCTGAAGCTGGGATTTaGGGTCATTCCAATCCTGAT +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLAEAGI*GHSNPD
Trigger: ATCAGGATTGGAATGACCCCAAATCCCAGCTTCAGC...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTGTCTTCAGTCTCATCTaGCTCTCTCTCTTGATGCTC +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLVFSLI*LSLLML
Trigger: GAGCATCAAGAGAGAGAGCCAGATGAGACTGAAGAC...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGGGGAGATGTCTGAAATaGGGACTACTGCTGTTATTA +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLGRCLK*GLLLLL
Trigger: TAATAACAGCAGTAGTCCTCATTTCAGACATCTCCC...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCGGAGTAGTAGTTTTCTaGATGAGTGCATCGAATCCA +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICGVVVF*MSASNP
Trigger: TGGATTCGATGCACTCATTCAGAAAACTACTACTCC...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGGGAGTAGTAGTTTTCTaGATGAGTGCATCGAATCCA +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLGVVVF*MSASNP
Trigger: TGGATTCGATGCACTCATTCAGAAAACTACTACTCC...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAAAAACTTCAGAGTCTaGGCTGCTAGAACAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLKNFRV*AARTGA
Trigger: AGCACCTGTTCTAGCAGCTCAGACTCTGAAGTTTTT...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCTTACAAAACGTGGCATaGAATGAAATCTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICLQNVA*NEILGS
Trigger: GCTGCCCAAGATTTCATTTCATGCCACGTTTTGTAA...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGGTCATTCCAATCCTaGTTCAAAATGAACTCTTTC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGSFQS*FKMNSF
Trigger: GAAAGAGTTCATTTTGAATCAGGATTGGAATGACCC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAACAGTCACAGTTACTaGGCAAGTAAATACTCCACA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSNSHSY*ASKYST
Trigger: TGTGGAGTATTTACTTGCTCAGTAACTGTGACTGTT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATATAGTTCTTGTCTTTaGCAGAACTCTGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSYSSCL*QNSGCH
Trigger: GTGACAACCAGAGTTCTGGCAAAGACAAGAACTATA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR GCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCAAAACAATTGGCCATTaGATGTCGAAGGTCCGATTC +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICKTIGH*MSKVRF
Trigger: GAATCGGACCTTCGACATGCAATGGCCAATTGTTTT...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAACTTCATTCATTGTCTaGAGGAAAACTAGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSTSFIV*RKTRLG
Trigger: ACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAATTAAAACTGGGAGGTaGGAAGTTGTGGTGAGAATA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSIKTGR*EVVVRI
Trigger: TATTCTCACCACAACTTCCCACCTCCCAGTTTTAAT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACACACTCGGATTCACTaGAACTCTCTAAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSHTRIH*NSLNLH
Trigger: ATGAAGATTTAGAGAGTTCCAGTGAATCCGAGTGTG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGATCATTCATCTGGCCTaGATCGTTGTACCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLIIHLA*IVVPKF
Trigger: GAACTTTGGTACAACGATCCAGGCCAGATGAATGAT...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCCAGTTTTTGGTACTGTaGGTCTCCTGCATAACTCAA +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICQFLVL*VSCITQ
Trigger: TTGAGTTATGCAGGAGACCCACAGTACCAAAAACTG...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTTCCAACCGTTCATTGTaGTTAATCCTCGAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLSNRSL*LILEGV
Trigger: AACTCCCTCGAGGATTAACCACAATGAACGGTTGGA...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGTACAAATGGACGCTaGTCAGAAATTCAACAACAG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSTNGR*SEIQQQ
Trigger: CTGTTGTTGAATTTCTGACCAGCGTCCATTTGTACT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCCTACCAGTTGCATTATaGAGTCACCTAGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICLPVAL*SHLGIP
Trigger: TGGAATTCCTAGGTGACTCCATAATGCAACTGGTAG...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACCTACCAGTTGCATTATaGAGTCACCTAGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHLPVAL*SHLGIP
Trigger: TGGAATTCCTAGGTGACTCCATAATGCAACTGGTAG...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGCATCATCTCTTCAATaGAATGAATCGTGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSASSLQ*NESCSL
Trigger: TAGACTACACGATTCATTTCATTGAAGAGATGATGC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGTTTGTCAGTTTGTTTaGCTTTGGGACTATTTGCTA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSVCQFV*LWDYLL
Trigger: TAGCAAATAGTCCCAAAGTCAAACAAACTGACAAAC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAATGAATTCCTGGCATaGTCAGGATTCATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSNEFLA*SGFIPK
Trigger: TTTTGGAATGAATCCTGATCATGCCAGGAATTCATT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTATCTTGGCCAAGGCGTaGCATGATATTTATCAAGGT +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLILAKA*HDIYQG
Trigger: ACCTTGATAAATATCATGTCACGCCTTGGCCAAGAT...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGCCAGAAGTCGAACATaGGTAAAAATTACTCCAATT +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSARSRT*VKITPI
Trigger: AATTGGAGTAATTTTTACTCATGTTCGACTTCTGGC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGGGGTCATTCCAATCCTaGTTCAAAATGAACTCTTTC +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLGSFQS*FKMNSF
Trigger: GAAAGAGTTCATTTTGAATCAGGATTGGAATGACCC...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGCCACCGGATGAAAGCTaGACAATCTACTTAAAAATC +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLPPDES*TIYLKI
Trigger: GATTTTTAAGTAGATTGTTCAGCTTTCATCCGGTGG...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCTATAGTTCTTGTCTTTaGCAGAACTCTGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICYSSCL*QNSGCH
Trigger: GTGACAACCAGAGTTCTGGCAAAGACAAGAACTATA...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGACTTCATTCATTGTCTaGAGGAAAACTAGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLTSFIV*RKTRLG
Trigger: ACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACCTACAAAACACTCACTaGTTAGAGAGAGGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHLQNTH*LERGKF
Trigger: GAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAG...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR GCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGCTACAAAACACTCACTaGTTAGAGAGAGGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLLQNTH*LERGKF
Trigger: GAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAG...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGAACTAGGGTTGTTCTaGAAACTATTAAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSELGLF*KLLKLG
Trigger: TCCCAGTTTTAATAGTTTCCAGAACAACCCTAGTTC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGCACACTCGGATTCACTaGAACTCTCTAAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLHTRIH*NSLNLH
Trigger: ATGAAGATTTAGAGAGTTCCAGTGAATCCGAGTGTG...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATTCCTTTCCTCCATCTaGAAGAAATCTTACAAAACG +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSFLSSI*KKSYKT
Trigger: CGTTTTGTAAGATTTCTTCCAGATGGAGGAAAGGAA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTCAGTTTTTGGTACTGTaGGTCTCCTGCATAACTCAA +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLQFLVL*VSCITQ
Trigger: TTGAGTTATGCAGGAGACCCACAGTACCAAAAACTG...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGAGTACAAATGGACGCTaGTCAGAAATTCAACAACAG +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLSTNGR*SEIQQQ
Trigger: CTGTTGTTGAATTTCTGACCAGCGTCCATTTGTACT...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCAGTACAAATGGACGCTaGTCAGAAATTCAACAACAG +
Preference number: 4 (lower is better)
Translates to: GFLLQNTHCLERGKFNICSTNGR*SEIQQQ
Trigger: CTGTTGTTGAATTTCTGACCAGCGTCCATTTGTACT...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTGTTTCTTTGCTAGCATaGCAAGGTGCTGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLVSLLA*QGADSE
Trigger: TTCAGAATCAGCACCTTGCCATGCTAGCAAAGAAAC...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTACGCTTCAAAACAATTaGCCATTGCATGTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLTLQNN*PLHVEG
Trigger: ACCTTCGACATGCAATGGCCAATTGTTTTGAAGCGT...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTTCTAGGGTCACAATCTaGGACACAGATGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLSRVTI*DTDGKT
Trigger: TGTTTTTCCATCTGTGTCCCAGATTGTGACCCTAGA...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACGTTTGTCAGTTTGTTTaGCTTTGGGACTATTTGCTA +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHVCQFV*LWDYLL
Trigger: TAGCAAATAGTCCCAAAGTCAAACAAACTGACAAAC...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGAATGAATTCCTGGCATaGTCAGGATTCATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLNEFLA*SGFIPK
Trigger: TTTTGGAATGAATCCTGATCATGCCAGGAATTCATT...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACGCCAGAAGTCGAACATaGGTAAAAATTACTCCAATT +
Preference number: 4 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHARSRT*VKITPI
Trigger: AATTGGAGTAATTTTTACTCATGTTCGACTTCTGGC...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTGGGTCATTCCAATCCTaGTTCAAAATGAACTCTTTC +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLGSFQS*FKMNSF
Trigger: GAAAGAGTTCATTTTGAATCAGGATTGGAATGACCC...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR TCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAACAGTCACAGTTACTaGGCAAGTAAATACTCCACA +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLNSHSY*ASKYST
Trigger: TGTGGAGTATTTACTTGCTCAGTAACTGTGACTGTT...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTCACACTCGGATTCACTaGAACTCTCTAAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLHTRIH*NSLNLH
Trigger: ATGAAGATTTAGAGAGTTCCAGTGAATCCGAGTGTG...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGTTCCTTTCCTCCATCTaGAAGAAATCTTACAAAACG +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLFLSSI*KKSYKT
Trigger: CGTTTTGTAAGATTTCTTCCAGATGGAGGAAAGGAA...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAACAGACAACGATCTTaGAAAGTATATCCTATCAAC +
Preference number: 4 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSNRQRS*KVYPIN
Trigger: GTTGATAGGATATACTTTCCAAGATCGTTGTCTGTT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR TCA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAATGAATTCCTGGCATaGTCAGGATTCATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLNEFLA*SGFIPK
Trigger: TTTTGGAATGAATCCTGATCATGCCAGGAATTCATT...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CCA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGAACAGACAACGATCTTaGAAAGTATATCCTATCAAC +
Preference number: 4 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLNRQRS*KVYPIN
Trigger: GTTGATAGGATATACTTTCCAAGATCGTTGTCTGTT...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS GCA 90 bp CATAATCAGATCTGTACCGGCTGTCTTGTCTTCTCCTGTCGGGACTaGGGCCTCGCTCCCGCCGATCCAGGGACCGATGCCTCTCACCTC +
Preference number: 5 (lower is better)
Translates to: HNQICTGCLVFSCRD*GLAPADPGTDASHL
Trigger: GAGGTGAGAGGCATCGGTCCCTGGATCGGCGGGAGCGAGGCCGCAGTCCCGACAGGAGAAGACAAGACAGCCGGTACAGATCTGATTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000512302.1
ENST00000513349.5
CDS CCA 90 bp CGCCGTCAGAGCAAAGCCAGGCTACTACCGCAGGTACCAAGACAGTaGCACCGCCCGCGCCTCCGGAACAGGAAACCGAGGGAATTAAAA +
Preference number: 5 (lower is better)
Translates to: RRQSKARLLPQVPRQ*HRPRLRNRKPRELK
Trigger: TTTTAATTCCCTCGGTTTCCTGTTCCGGAGGCGCGGGCGGTGCCACTGTCTTGGTACCTGCGGTAGTAGCCTGGCTTTGCTCTGACGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513349.5
CDS CCA 90 bp CCAAAAGGTCCGCCAAGGTCTTGGTGCGAAGCGCCACAGGCCTCTTaGTCTTGTCGTTGGTTATGGCGTACTCCTGCATGCCCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: PKGPPRSWCEAPQAS*SCRWLWRTPACPAP
Trigger: AGGAGCTGGGCATGCAGGAGTACGCCATAACCAACGACAAGACCAAGAGGCCTGTGGCGCTTCGCACCAAGACCTTGGCGGACCTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS CCA 90 bp CTCCCGTTCTCGCTCTCTGCTCCGTTCGTAGCTGCGGTGGCGAGATaGTGTTCTCCCTCGGTCATAATCAGATCTGTACCGGCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: LPFSLSAPFVAAVAR*CSPSVIIRSVPAVL
Trigger: CAAGACAGCCGGTACAGATCTGATTATGACCGAGGGAGAACACCATCTCGCCACCGCAGCTACGAACGGAGCAGAGAGCGAGAACGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS CCA 90 bp CCTACTTGGGGAGCGACTGCTCCGTTCGTAGCTGCGGTGGCGAGATaGTGTTCTCCCTCGGTCATAATCAGATCTGTACCGGCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: PTWGATAPFVAAVAR*CSPSVIIRSVPAVL
Trigger: CAAGACAGCCGGTACAGATCTGATTATGACCGAGGGAGAACACCATCTCGCCACCGCAGCTACGAACGGAGCAGTCGCTCCCCAAGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512076.1
CDS GCA 90 bp GTGTGCATCCAGCAGGTTCAGGAACAACCGATAAACCGTAACTCCTaGTCCGTTCGTAGCTGCGGTGGCGAGATGGTGTTCTCCCTCGGT +
Preference number: 5 (lower is better)
Translates to: VCIQQVQEQPINRNS*SVRSCGGEMVFSLG
Trigger: ACCGAGGGAGAACACCATCTCGCCACCGCAGCTACGAACGGAGCAGGAGTTACGGTTTATCGGTTGTTCCTGAACCTGCTGGATGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512302.1
CDS-3UTR CAA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAGGAGGCCGAGCAGCTTaGGCCTTTTCTTGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: AHLERLIKAINPPPSCSPGGRAA*AFSCLL
Trigger: GAGCAGGCAAGAAAAGGCCAAAGCTGCTCGGCCTCC...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGGGAGGCCGAGCAGCTTaGGCCTTTTCTTGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LQGPLREADKSYKPSSFLGGRAA*AFSCLL
Trigger: GAGCAGGCAAGAAAAGGCCAAAGCTGCTCGGCCTCC...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCACATCGAGCTTCGTCTTaGGAGGTTCCCACGGAGGCC +
Preference number: 5 (lower is better)
Translates to: AHLERLIKAINPPPSCSPHRASS*EVPTEA
Trigger: GGCCTCCGTGGGAACCTCCAAAGACGAAGCTCGATG...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS GCA 90 bp CCACAGGCCTCTTGGTCTTGTCGTTGGTTATGGCGTACTCCTGCATaGCCAGCTCCTCCGCTACCTTGGCCTGAGTTCTATTATTCACCA +
Preference number: 5 (lower is better)
Translates to: PQASWSCRWLWRTPA*PAPPLPWPEFYYSP
Trigger: TGGTGAATAATAGAACTCAGGCCAAGGTAGCGGAGGAGCTGGGCATGCAGGAGTACGCCATAACCAACGACAAGACCAAGAGGCCTGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS-3UTR CAA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGTCTCACTGGGAGCCTTaGGGAGTGGGTATGGAGGGA +
Preference number: 5 (lower is better)
Translates to: LQGPLREADKSYKPSSFLSHWEP*GVGMEG
Trigger: TCCCTCCATACCCACTCCCAAAGGCTCCCAGTGAGA...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCACTGTGCGTCTTGCCTTaGCGCTGCATTTGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: AHLERLIKAINPPPSCSPLCVLP*RCICRV
Trigger: CACTCTGCAAATGCAGCGCAAAGGCAAGACGCACAG...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS GCA 90 bp CCCACTGAAGCATATTGGCAATCTCCTCCTCAGGCACCAGGGCTTTaGTGCACCTTAACAAGTACAGGAGAATCTGGTGCATGGACAGCA +
Preference number: 5 (lower is better)
Translates to: PTEAYWQSPPQAPGL*CTLTSTGESGAWTA
Trigger: TGCTGTCCATGCACCAGATTCTCCTGTACTTGTTAAGGTGCAGCAAAGCCCTGGTGCCTGAGGAGGAGATTGCCAATATGCTTCAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344624.8
ENST00000510375.5
ENST00000511367.6
ENST00000511803.1
ENST00000512124.6
ENST00000512885.1
ENST00000513349.5
CDS GCA 90 bp GTTCAGGAACAACCGATAAACCGTAACTCCTGCTCCGTTCGTAGCTaGGGTGGCGAGATGGTGTTCTCCCTCGGTCATAATCAGATCTGT +
Preference number: 5 (lower is better)
Translates to: VQEQPINRNSCSVRS*GGEMVFSLGHNQIC
Trigger: ACAGATCTGATTATGACCGAGGGAGAACACCATCTCGCCACCGCAGCTACGAACGGAGCAGGAGTTACGGTTTATCGGTTGTTCCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512302.1
CDS CCA 90 bp CTTCTGCATATTTCTGCCACTCCAGCTCCTCCCACTGAAGCATATTaGCAATCTCCTCCTCAGGCACCAGGGCTTTGCTGCACCTTAACA +
Preference number: 5 (lower is better)
Translates to: LLHISATPAPPTEAY*QSPPQAPGLCCTLT
Trigger: TGTTAAGGTGCAGCAAAGCCCTGGTGCCTGAGGAGGAGATTGCCAATATGCTTCAGTGGGAGGAGCTGGAGTGGCAGAAATATGCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344624.8
ENST00000510375.5
ENST00000511367.6
ENST00000511803.1
ENST00000512124.6
ENST00000513349.5
CDS CCA 90 bp TTCTCCCTTGAAATAAACAGCCACAGTGTAGGTTCGGGCATGGGATaGGCCCACTGTCTGCAGAGTCTTGTACAGAGGAATGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: FSLEINSHSVGSGMG*AHCLQSLVQRNVWL
Trigger: GAGCCAGACATTCCTCTGTACAAGACTCTGCAGACAGTGGGCCCATCCCATGCCCGAACCTACACTGTGGCTGTTTATTTCAAGGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS-3UTR CAA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGAAGCAGCCTCAGATTTaGGGGCCTAAAGGATGGTGC +
Preference number: 5 (lower is better)
Translates to: LQGPLREADKSYKPSSFLKQPQI*GPKGWC
Trigger: GCACCATCCTTTAGGCCCCAAAATCTGAGGCTGCTT...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCATCTTCCTCCTCATTCTaGTCAGGCATGGTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: AHLERLIKAINPPPSCSPSSSSF*SGMVSS
Trigger: CGAGGAGACCATGCCTGACAAGAATGAGGAGGAAGA...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGTCAGGCACCAGGGCTTaGCTGCACCTTAACAAGTAC +
Preference number: 5 (lower is better)
Translates to: LQGPLREADKSYKPSSFLSGTRA*LHLNKY
Trigger: GTACTTGTTAAGGTGCAGCAAAGCCCTGGTGCCTGA...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCCTCTTGGTCTTGTCGTaGGTTATGGCGTACTCCTGC +
Preference number: 5 (lower is better)
Translates to: CRAHLERLIKAINPPPSCLLVLS*VMAYSC
Trigger: GCAGGAGTACGCCATAACCAACGACAAGACCAAGAG...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAACAGGCCTCTTGGTCTaGTCGTTGGTTATGGCGTAC +
Preference number: 5 (lower is better)
Translates to: AHLERLIKAINPPPSCSPTGLLV*SLVMAY
Trigger: GTACGCCATAACCAACGACAAGACCAAGAGGCCTGT...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCCCGCTTGCTGAATACTaGGTCCTTTCCCACAGCCTA +
Preference number: 5 (lower is better)
Translates to: CRAHLERLIKAINPPPSCPLAEY*VLSHSL
Trigger: TAGGCTGTGGGAAAGGACCAAGTATTCAGCAAGCGG...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS CCA 90 bp CCTTTCTGGGGACCTTCTCTCACTGGGAGCCTTTGGGAGTGGGTATaGAGGGAGATGTCTGAAATGAGGACTACTGCTGTTATTAGCACT +
Preference number: 5 (lower is better)
Translates to: PFWGPSLTGSLWEWV*REMSEMRTTAVIST
Trigger: AGTGCTAATAACAGCAGTAGTCCTCATTTCAGACATCTCCCTCCATACCCACTCCCAAAGGCTCCCAGTGAGAGAAGGTCCCCAGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5
CDS-3UTR CAA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTTCTCGGTTGCGGTTaGGAAACAGAGACACTGAAG +
Preference number: 5 (lower is better)
Translates to: LQGPLREADKSYKPSSFLLLGCG*ETETLK
Trigger: CTTCAGTGTCTCTGTTTCCAAACCGCAACCGAGAAG...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344624.8
CDS-3UTR CAA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGTGGGGGCTGGAGAGTTaGAGAAAGTGGTGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLWGLES*RKWWKG
Trigger: CCCCTTCCACCACTTTCTCAAACTCTCCAGCCCCCA...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGTCTCACTGGGAGCCTTaGGGAGTGGGTATGGAGGGA +
Preference number: 5 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLSHWEP*GVGMEG
Trigger: TCCCTCCATACCCACTCCCAAAGGCTCCCAGTGAGA...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAGGTTTCGTCCCAGGGTaGGTAACAATCATGCCTTTG +
Preference number: 5 (lower is better)
Translates to: AHLERLIKAINPPPSCSPGFVPG*VTIMPL
Trigger: CAAAGGCATGATTGTTACCAACCCTGGGACGAAACC...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCACTGTTCACGATCCAGTaGATCGATACGGACAGAGCT +
Preference number: 5 (lower is better)
Translates to: AHLERLIKAINPPPSCSPLFTIQ*IDTDRA
Trigger: AGCTCTGTCCGTATCGATCAACTGGATCGTGAACAG...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTGTTCACGATCCAGTaGATCGATACGGACAGAGCT +
Preference number: 5 (lower is better)
Translates to: LQGPLREADKSYKPSSFLLFTIQ*IDTDRA
Trigger: AGCTCTGTCCGTATCGATCAACTGGATCGTGAACAG...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGTTTCTGTCTCCGTATTaGGGCTGCCGAATTCCACAG +
Preference number: 5 (lower is better)
Translates to: LQGPLREADKSYKPSSFLFLSPY*GCRIPQ
Trigger: CTGTGGAATTCGGCAGCCCAAATACGGAGACAGAAA...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTGGCAGTCCGATAGGTaGCTAATCCTCCTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: CRAHLERLIKAINPPPSCWQSDR*LILLLP
Trigger: TGGAAGAAGGAGGATTAGCAACCTATCGGACTGCCA...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGGTCCGCCAAGGTCTaGGTGCGAAGCGCCACAGGC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSRSAKV*VRSATG
Trigger: GCCTGTGGCGCTTCGCACCAAGACCTTGGCGGACCT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS TCA 90 bp CTTGCTGAATACTTGGTCCTTTCCCACAGCCTATTCTTTCTCCCTTaGAATAAACAGCCACAGTGTAGGTTCGGGCATGGGATGGGCCCA +
Preference number: 5 (lower is better)
Translates to: LAEYLVLSHSLFFLP*NKQPQCRFGHGMGP
Trigger: TGGGCCCATCCCATGCCCGAACCTACACTGTGGCTGTTTATTTCAAGGGAGAAAGAATAGGCTGTGGGAAAGGACCAAGTATTCAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000512166.2
ENST00000513349.5
ENST00000514927.6
CDS GCA 90 bp ACTGAAGCATATTGGCAATCTCCTCCTCAGGCACCAGGGCTTTGCTaGACCTTAACAAGTACAGGAGAATCTGGTGCATGGACAGCACTT +
Preference number: 5 (lower is better)
Translates to: TEAYWQSPPQAPGLC*TLTSTGESGAWTAL
Trigger: AAGTGCTGTCCATGCACCAGATTCTCCTGTACTTGTTAAGGTGCAGCAAAGCCCTGGTGCCTGAGGAGGAGATTGCCAATATGCTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344624.8
ENST00000510375.5
ENST00000511367.6
ENST00000511803.1
ENST00000512124.6
ENST00000512885.1
ENST00000513349.5
CDS GCA 90 bp ACTGTGTCCTCAGAAGTCTCCCCACCTGACAGACATCAGAACGGATaGCAGTTTTCCAGAATCCTTGGCTACTTAGCTCCACCGTTACTT +
Preference number: 5 (lower is better)
Translates to: TVSSEVSPPDRHQNG*QFSRILGYLAPPLL
Trigger: AAGTAACGGTGGAGCTAAGTAGCCAAGGATTCTGGAAAACTGGCATCCGTTCTGATGTCTGTCAGGTGGGGAGACTTCTGAGGACACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509608.1
CDS CCA 90 bp TTTCAGCCTTTCTGGGGACCTTCTCTCACTGGGAGCCTTTGGGAGTaGGTATGGAGGGAGATGTCTGAAATGAGGACTACTGCTGTTATT +
Preference number: 5 (lower is better)
Translates to: FQPFWGPSLTGSLWE*VWREMSEMRTTAVI
Trigger: AATAACAGCAGTAGTCCTCATTTCAGACATCTCCCTCCATACCCACTCCCAAAGGCTCCCAGTGAGAGAAGGTCCCCAGAAAGGCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5
CDS CCA 90 bp CGTTGGTTATGGCGTACTCCTGCATGCCCAGCTCCTCCGCTACCTTaGCCTGAGTTCTATTATTCACCAAAGAGCTTCGCAACAAAGTTA +
Preference number: 5 (lower is better)
Translates to: RWLWRTPACPAPPLP*PEFYYSPKSFATKL
Trigger: TAACTTTGTTGCGAAGCTCTTTGGTGAATAATAGAACTCAGGCCAAGGTAGCGGAGGAGCTGGGCATGCAGGAGTACGCCATAACCAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGAAGGGGAAAGTGCCTaGTCCAGGAGGTGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSEGESA*SRRCPR
Trigger: CCTGGGGCACCTCCTGGACAAGGCACTTTCCCCTTC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGTCTTCTTCTCCCTACTaGGGGAGCGATGATTCACAA +
Preference number: 5 (lower is better)
Translates to: LQGPLREADKSYKPSSFLSSSPY*GSDDSQ
Trigger: TTGTGAATCATCGCTCCCCAAGTAGGGAGAAGAAGA...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTTGCCAGAACTCTGGTaGTCACTCCAACGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: CRAHLERLIKAINPPPSCLPELW*SLQRSF
Trigger: AAAAGACCGTTGGAGTGACAACCAGAGTTCTGGCAA...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCATTGCCAGAACTCTGGTaGTCACTCCAACGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: AHLERLIKAINPPPSCSPLPELW*SLQRSF
Trigger: AAAAGACCGTTGGAGTGACAACCAGAGTTCTGGCAA...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGATAGGACGACAGGGCTaGATGGCCTCTTCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLIGRQG*MASSPG
Trigger: TCCTGGAGAAGAGGCCATCAAGCCCTGTCGTCCTAT...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGGAACAGGTAGCATCATaGCATGCTGACAGACATCAG +
Preference number: 5 (lower is better)
Translates to: LQGPLREADKSYKPSSFLEQVAS*HADRHQ
Trigger: CTGATGTCTGTCAGCATGCAATGATGCTACCTGTTC...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTTTGCAGCTGATAACTaGATGAACAGCCACCGGATG +
Preference number: 5 (lower is better)
Translates to: CRAHLERLIKAINPPPSCFAADN*MNSHRM
Trigger: CATCCGGTGGCTGTTCATCAAGTTATCAGCTGCAAA...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS TCA 90 bp GTTATGGCGTACTCCTGCATGCCCAGCTCCTCCGCTACCTTGGCCTaGGTTCTATTATTCACCAAAGAGCTTCGCAACAAAGTTAAGTGT +
Preference number: 5 (lower is better)
Translates to: VMAYSCMPSSSATLA*VLLFTKELRNKVKC
Trigger: ACACTTAACTTTGTTGCGAAGCTCTTTGGTGAATAATAGAACTCAGGCCAAGGTAGCGGAGGAGCTGGGCATGCAGGAGTACGCCATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS-3UTR CAA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGACTTGGAGGTTCATATaGATATTGCACAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LQGPLREADKSYKPSSFLTWRFI*ILHRRL
Trigger: CAGCCTCCTGTGCAATATCAATATGAACCTCCAAGT...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGTGGTGGAAGGGGCACTaGGAGGTTCATATTGATATT +
Preference number: 5 (lower is better)
Translates to: LQGPLREADKSYKPSSFLWWKGH*EVHIDI
Trigger: AATATCAATATGAACCTCCAAGTGCCCCTTCCACCA...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACGAAGGGGAAAGTGCCTaGTCCAGGAGGTGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHEGESA*SRRCPR
Trigger: CCTGGGGCACCTCCTGGACAAGGCACTTTCCCCTTC...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGAGGCCGAGCAGCTTaGGCCTTTTCTTGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGGRAA*AFSCLL
Trigger: GAGCAGGCAAGAAAAGGCCAAAGCTGCTCGGCCTCC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACATCGAGCTTCGTCTTaGGAGGTTCCCACGGAGGCC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSHRASS*EVPTEA
Trigger: GGCCTCCGTGGGAACCTCCAAAGACGAAGCTCGATG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAAATTCCAACCGTTCATaGTGGTTAATCCTCGAGGGA +
Preference number: 5 (lower is better)
Translates to: AHLERLIKAINPPPSCSPNSNRS*WLILEG
Trigger: TCCCTCGAGGATTAACCACAATGAACGGTTGGAATT...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCCAAAACAATTGGCCATaGCATGTCGAAGGTCCGATT +
Preference number: 5 (lower is better)
Translates to: CRAHLERLIKAINPPPSCQNNWP*HVEGPI
Trigger: AATCGGACCTTCGACATGCAATGGCCAATTGTTTTG...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCACAAAACAATTGGCCATaGCATGTCGAAGGTCCGATT +
Preference number: 5 (lower is better)
Translates to: AHLERLIKAINPPPSCSPQNNWP*HVEGPI
Trigger: AATCGGACCTTCGACATGCAATGGCCAATTGTTTTG...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCAACGCTTCAAAACAATaGGCCATTGCATGTCGAAGG +
Preference number: 5 (lower is better)
Translates to: CRAHLERLIKAINPPPSCNASKQ*AIACRR
Trigger: CCTTCGACATGCAATGGCCAATTGTTTTGAAGCGTT...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCGTTGTCGATCAGTATTaGGCTCTTGTAGTTGGAGTG +
Preference number: 5 (lower is better)
Translates to: CRAHLERLIKAINPPPSCVVDQY*ALVVGV
Trigger: CACTCCAACTACAAGAGCCAAATACTGATCGACAAC...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGGTCCGCCAAGGTCTaGGTGCGAAGCGCCACAGGC +
Preference number: 5 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLRSAKV*VRSATG
Trigger: GCCTGTGGCGCTTCGCACCAAGACCTTGGCGGACCT...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAAGCACACTTCATTCATaGTCTGCAGGAAAACTAGGC +
Preference number: 5 (lower is better)
Translates to: AHLERLIKAINPPPSCSPSTLHS*SAGKLG
Trigger: GCCTAGTTTTCCTGCAGACAATGAATGAAGTGTGCT...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS TCA 90 bp ATCGGAAAAGTAATCACATCGGGGTTGAACTGTTCACGATCCAGTTaGTCGATACGGACAGAGCTTGGTTTCGTCCCAGGGTTGGTAACA +
Preference number: 5 (lower is better)
Translates to: IGKVITSGLNCSRSS*SIRTELGFVPGLVT
Trigger: TGTTACCAACCCTGGGACGAAACCAAGCTCTGTCCGTATCGATCAACTGGATCGTGAACAGTTCAACCCCGATGTGATTACTTTTCCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344624.8
ENST00000510375.5
ENST00000511367.6
ENST00000511803.1
ENST00000512124.6
ENST00000513349.5
CDS TCA 90 bp GCCATTGCATGTCGAAGGTCCGATTCTCTACAAAGGTCAGGCCCGTaGGCATACAGCATAAATCGATCCAGTTCAAGTTTCTTTGCTAGC +
Preference number: 5 (lower is better)
Translates to: AIACRRSDSLQRSGP*AYSINRSSSSFFAS
Trigger: GCTAGCAAAGAAACTTGAACTGGATCGATTTATGCTGTATGCTCACGGGCCTGACCTTTGTAGAGAATCGGACCTTCGACATGCAATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000504133.5
ENST00000511367.6
ENST00000513349.5
CDS GCA 90 bp TACTTTCCTCTAGAGGGCATGTGGGTCTCCTGCATAACTCAACTGTaGAGGGCGTATCCCAAAGTGGACGATAATCGGAAAAGTAATCAC +
Preference number: 5 (lower is better)
Translates to: YFPLEGMWVSCITQL*RAYPKVDDNRKSNH
Trigger: GTGATTACTTTTCCGATTATCGTCCACTTTGGGATACGCCCTGCACAGTTGAGTTATGCAGGAGACCCACATGCCCTCTAGAGGAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512124.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATGGGGGCTGGAGAGTTaGAGAAAGTGGTGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSWGLES*RKWWKG
Trigger: CCCCTTCCACCACTTTCTCAAACTCTCCAGCCCCCA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATGCCTCATCTGGTGGTaGGGGAAAGGCGGCCTGATT +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSCLIWW*GKGGLI
Trigger: AATCAGGCCGCCTTTCCCCAACCACCAGATGAGGCA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATCTCACTGGGAGCCTTaGGGAGTGGGTATGGAGGGA +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSHWEP*GVGMEG
Trigger: TCCCTCCATACCCACTCCCAAAGGCTCCCAGTGAGA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCCATCGAGCTTCGTCTTaGGAGGTTCCCACGGAGGCC +
Preference number: 5 (lower is better)
Translates to: GFLLQNTHCLERGKFNICHRASS*EVPTEA
Trigger: GGCCTCCGTGGGAACCTCCAAAGACGAAGCTCGATG...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGTGGGCCTTTTTGCGTTaGATTTCTGCAATAACGTCA +
Preference number: 5 (lower is better)
Translates to: LQGPLREADKSYKPSSFLWAFLR*ISAITS
Trigger: TGACGTTATTGCAGAAATCAAACGCAAAAAGGCCCA...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTGGGCCTTTTTGCGTTaGATTTCTGCAATAACGTCA +
Preference number: 5 (lower is better)
Translates to: CRAHLERLIKAINPPPSCWAFLR*ISAITS
Trigger: TGACGTTATTGCAGAAATCAAACGCAAAAAGGCCCA...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGGGTTTCGTCCCAGGGTaGGTAACAATCATGCCTTTG +
Preference number: 5 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLGFVPG*VTIMPL
Trigger: CAAAGGCATGATTGTTACCAACCCTGGGACGAAACC...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACGATACGGACAGAGCTaGGTTTCGTCCCAGGGTTGG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSRYGQS*VSSQGW
Trigger: CCAACCCTGGGACGAAACCAAGCTCTGTCCGTATCG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCAGTTTGTTTGACTTaGGGACTATTTGCTAGGAGG +
Preference number: 5 (lower is better)
Translates to: CRAHLERLIKAINPPPSCSVCLT*GLFARR
Trigger: CCTCCTAGCAAATAGTCCCAAAGTCAAACAAACTGA...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGTGGCAGTCCGATAGGTaGCTAATCCTCCTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLWQSDR*LILLLP
Trigger: TGGAAGAAGGAGGATTAGCAACCTATCGGACTGCCA...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp GCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTCCCCAGTAAATACTCCACACTaGCATGCCCTCCTTTATTTC +
Preference number: 5 (lower is better)
Translates to: AHLERLIKAINPPPSCSPVNTPH*HALLYF
Trigger: GAAATAAAGGAGGGCATGCAAGTGTGGAGTATTTAC...TGGGGAGCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS TCA 90 bp CTCATTCTTGTCAGGCATGGTCTCCTCGGGCTCTTTTTCCTTGATTaGGGTATAGTTCTTGTCTTTGCCAGAACTCTGGTTGTCACTCCA +
Preference number: 5 (lower is better)
Translates to: LILVRHGLLGLFFLD*GIVLVFARTLVVTP
Trigger: TGGAGTGACAACCAGAGTTCTGGCAAAGACAAGAACTATACCTCAATCAAGGAAAAAGAGCCCGAGGAGACCATGCCTGACAAGAATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000512302.1
ENST00000513349.5
CDS TCA 90 bp GGTCCATCATTCATCTGGCCTGGATCGTTGTACCAAAGTTCATCATaGAGTCGGTCAGGGTGGGCCTTTTTGCGTTTGATTTCTGCAATA +
Preference number: 5 (lower is better)
Translates to: GPSFIWPGSLYQSSS*SRSGWAFLRLISAI
Trigger: TATTGCAGAAATCAAACGCAAAAAGGCCCACCCTGACCGACTTCATGATGAACTTTGGTACAACGATCCAGGCCAGATGAATGATGGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5
CDS TCA 90 bp GCCAAGAAGTCTCAATCCTGGGCTCCTGTCATGATCACCCCACAATaGCTCATTCTTCAAGGCACATGGAAAGTCAATTTTAGGCATGCT +
Preference number: 5 (lower is better)
Translates to: AKKSQSWAPVMITPQ*LILQGTWKVNFRHA
Trigger: AGCATGCCTAAAATTGACTTTCCATGTGCCTTGAAGAATGAGTCATTGTGGGGTGATCATGACAGGAGCCCAGGATTGAGACTTCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509067.1
CDS GCA 90 bp CTTCCACAGTTTTTGGTACTGTGGGTCTCCTGCATAACTCAACTGTaGAGGGCGTATCCCAAAGTGGACGATAATCGGAAAAGTAATCAC +
Preference number: 5 (lower is better)
Translates to: LPQFLVLWVSCITQL*RAYPKVDDNRKSNH
Trigger: GTGATTACTTTTCCGATTATCGTCCACTTTGGGATACGCCCTGCACAGTTGAGTTATGCAGGAGACCCACAGTACCAAAAACTGTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS CCA 90 bp CAAGGCACATGGAAAGTCAATTTTAGGCATGCTGGATCCAACCAATaGCCTGCAGGCAACAAGTACTTACTTGTACAGAGGAATGTCTGG +
Preference number: 5 (lower is better)
Translates to: QGTWKVNFRHAGSNQ*PAGNKYLLVQRNVW
Trigger: CCAGACATTCCTCTGTACAAGTAAGTACTTGTTGCCTGCAGGCCATTGGTTGGATCCAGCATGCCTAAAATTGACTTTCCATGTGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509067.1
CDS-3UTR CAA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGTGGGGGCTGGAGAGTTaGAGAAAGTGGTGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLWGLES*RKWWKG
Trigger: CCCCTTCCACCACTTTCTCAAACTCTCCAGCCCCCA...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACTGCCTCATCTGGTGGTaGGGGAAAGGCGGCCTGATT +
Preference number: 5 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHCLIWW*GKGGLI
Trigger: AATCAGGCCGCCTTTCCCCAACCACCAGATGAGGCA...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATCTGTACCGGCTGTCTaGTCTTCTCCTGTCGGGACT +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSVPAV*SSPVGT
Trigger: AGTCCCGACAGGAGAAGACAAGACAGCCGGTACAGA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGCTTTGGCCTTTTCTaGCCTGCTCCCCAACTCCTC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSFGLF*PAPQLL
Trigger: GAGGAGTTGGGGAGCAGGCAAGAAAAGGCCAAAGCT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACTGTGCGTCTTGCCTTaGCGCTGCATTTGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSLCVLP*RCICRV
Trigger: CACTCTGCAAATGCAGCGCAAAGGCAAGACGCACAG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAATAGGACGACAGGGCTaGATGGCCTCTTCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSIGRQG*MASSPG
Trigger: TCCTGGAGAAGAGGCCATCAAGCCCTGTCGTCCTAT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGTCTGCCAGCATTGTaGGTCATAGGACGACAGGGC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSLPAL*VIGRQG
Trigger: GCCCTGTCGTCCTATGACCAACAATGCTGGCAGACT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGCGATACGGACAGAGCTaGGTTTCGTCCCAGGGTTGG +
Preference number: 5 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLRYGQS*VSSQGW
Trigger: CCAACCCTGGGACGAAACCAAGCTCTGTCCGTATCG...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGGTAATCACATCGGGGTaGAACTGTTCACGATCCAGT +
Preference number: 5 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLVITSG*NCSRSS
Trigger: ACTGGATCGTGAACAGTTCAACCCCGATGTGATTAC...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGGAACAGGTAGCATCATaGCATGCTGACAGACATCAG +
Preference number: 5 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLEQVAS*HADRHQ
Trigger: CTGATGTCTGTCAGCATGCAATGATGCTACCTGTTC...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACGTCCAAATAACTGCTaGGCTTCCTCCAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSRPNNC*ASSRLP
Trigger: GGGAAGCCTGGAGGAAGCCAAGCAGTTATTTGGACG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGCGCCACAGGCCTCTaGGTCTTGTCGTTGGTTATG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSATGL*VLSLVM
Trigger: CATAACCAACGACAAGACCAAGAGGCCTGTGGCGCT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS TCA 90 bp AGAATCTCCCACCTGATCCATGGGGTCACTGGAGTAGTAGTTTTCTaGATGAGTGCATCGAATCCACACAGGCTTAAGAAGTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RISHLIHGVTGVVVF*MSASNPHRLKKFFF
Trigger: GAAGAAGAACTTCTTAAGCCTGTGTGGATTCGATGCACTCATTCAGAAAACTACTACTCCAGTGACCCCATGGATCAGGTGGGAGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5
CDS TCA 90 bp ATTGTGGTTAATCCTCGAGGGAGTTGGGTCATCTTGGCCAAGGCGTaGCATGATATTTATCAAGGTGTTAATCCCTTTCTTCCGCATGTG +
Preference number: 5 (lower is better)
Translates to: IVVNPRGSWVILAKA*HDIYQGVNPFLPHV
Trigger: CACATGCGGAAGAAAGGGATTAACACCTTGATAAATATCATGTCACGCCTTGGCCAAGATGACCCAACTCCCTCGAGGATTAACCACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCTCTGTACCGGCTGTCTaGTCTTCTCCTGTCGGGACT +
Preference number: 5 (lower is better)
Translates to: GFLLQNTHCLERGKFNICSVPAV*SSPVGT
Trigger: AGTCCCGACAGGAGAAGACAAGACAGCCGGTACAGA...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACTCTGTACCGGCTGTCTaGTCTTCTCCTGTCGGGACT +
Preference number: 5 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHSVPAV*SSPVGT
Trigger: AGTCCCGACAGGAGAAGACAAGACAGCCGGTACAGA...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGATGGTGATCTTCGGTaGTCTCGATGCCTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSDGDLR*SRCLCL
Trigger: GAGACACAGGCATCGAGACAACCGAAGATCACCATC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATCTTCCTCCTCATTCTaGTCAGGCATGGTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSSSSF*SGMVSS
Trigger: CGAGGAGACCATGCCTGACAAGAATGAGGAGGAAGA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACAGCTTTGGCCTTTTCTaGCCTGCTCCCCAACTCCTC +
Preference number: 5 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHSFGLF*PAPQLL
Trigger: GAGGAGTTGGGGAGCAGGCAAGAAAAGGCCAAAGCT...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCAGCTTTGGCCTTTTCTaGCCTGCTCCCCAACTCCTC +
Preference number: 5 (lower is better)
Translates to: GFLLQNTHCLERGKFNICSFGLF*PAPQLL
Trigger: GAGGAGTTGGGGAGCAGGCAAGAAAAGGCCAAAGCT...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGCCTTTGCGCTGCATTaGCAGAGTGGTCCATCATTC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSAFALH*QSGPSF
Trigger: GAATGATGGACCACTCTGCAAATGCAGCGCAAAGGC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCATAGGACGACAGGGCTaGATGGCCTCTTCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: GFLLQNTHCLERGKFNICIGRQG*MASSPG
Trigger: TCCTGGAGAAGAGGCCATCAAGCCCTGTCGTCCTAT...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACAGTCTGCCAGCATTGTaGGTCATAGGACGACAGGGC +
Preference number: 5 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHSLPAL*VIGRQG
Trigger: GCCCTGTCGTCCTATGACCAACAATGCTGGCAGACT...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGAGTCTGCCAGCATTGTaGGTCATAGGACGACAGGGC +
Preference number: 5 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLSLPAL*VIGRQG
Trigger: GCCCTGTCGTCCTATGACCAACAATGCTGGCAGACT...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATCAGGCACCAGGGCTTaGCTGCACCTTAACAAGTAC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSGTRA*LHLNKY
Trigger: GTACTTGTTAAGGTGCAGCAAAGCCCTGGTGCCTGA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTCGATACGGACAGAGCTaGGTTTCGTCCCAGGGTTGG +
Preference number: 5 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLRYGQS*VSSQGW
Trigger: CCAACCCTGGGACGAAACCAAGCTCTGTCCGTATCG...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGTTACTTCTCGTCTCATaGTATTCTTCTGCCGTATTT +
Preference number: 5 (lower is better)
Translates to: LQGPLREADKSYKPSSFLLLLVS*YSSAVF
Trigger: AAATACGGCAGAAGAATACAATGAGACGAGAAGTAA...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCTTACTTCTCGTCTCATaGTATTCTTCTGCCGTATTT +
Preference number: 5 (lower is better)
Translates to: CRAHLERLIKAINPPPSCLLLVS*YSSAVF
Trigger: AAATACGGCAGAAGAATACAATGAGACGAGAAGTAA...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGCGTATATCCTATCAACTaGTCCAAATGCATTAGGCAT +
Preference number: 5 (lower is better)
Translates to: CRAHLERLIKAINPPPSCVYPIN*SKCIRH
Trigger: ATGCCTAATGCATTTGGACAAGTTGATAGGATATAC...GCAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCCGTCCAAATAACTGCTaGGCTTCCTCCAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: GFLLQNTHCLERGKFNICRPNNC*ASSRLP
Trigger: GGGAAGCCTGGAGGAAGCCAAGCAGTTATTTGGACG...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp CTGCAGGGCCCACTTAGAGAGGCTGATAAAAGCTATAAACCCTCCTCCTTCCTGAGAAGTTTCAATAAGTaGTCGATCAGTATTTGGCTC +
Preference number: 5 (lower is better)
Translates to: LQGPLREADKSYKPSSFLRSFNK*SISIWL
Trigger: GAGCCAAATACTGATCGACAACTTATTGAAACTTCT...CAGGAAGGAGGAGGGTTTATAGCTTTTATCAGCCTCTCTAAGTGGGCCCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACTCTTGGTCTTGTCGTaGGTTATGGCGTACTCCTGC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSLLVLS*VMAYSC
Trigger: GCAGGAGTACGCCATAACCAACGACAAGACCAAGAG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAACAGGCCTCTTGGTCTaGTCGTTGGTTATGGCGTAC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSTGLLV*SLVMAY
Trigger: GTACGCCATAACCAACGACAAGACCAAGAGGCCTGT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACCGCTTGCTGAATACTaGGTCCTTTCCCACAGCCTA +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSPLAEY*VLSHSL
Trigger: TAGGCTGTGGGAAAGGACCAAGTATTCAGCAAGCGG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATCTTCTTCTCCCTACTaGGGGAGCGACTTCCAGATC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSSSPY*GSDFQI
Trigger: GATCTGGAAGTCGCTCCCCAAGTAGGGAGAAGAAGA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513349.5
CDS TCA 90 bp CTTTTTGCGTTTGATTTCTGCAATAACGTCAAAAACTTCAGAGTCTaGGCTGCTAGAACAGGTGCTGTCCTCATCAGACTCACACTCGGA +
Preference number: 5 (lower is better)
Translates to: LFAFDFCNNVKNFRV*AARTGAVLIRLTLG
Trigger: TCCGAGTGTGAGTCTGATGAGGACAGCACCTGTTCTAGCAGCTCAGACTCTGAAGTTTTTGACGTTATTGCAGAAATCAAACGCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5
CDS TCA 90 bp TGTGATGCTATATGGAAGTGGGGACTCATGTGTTTCCCTGCATCATaGTGTTCCGCCTGGATATGTCACATCTTCCACAGAGAATATAAG +
Preference number: 5 (lower is better)
Translates to: CDAIWKWGLMCFPAS*CSAWICHIFHREYK
Trigger: CTTATATTCTCTGTGGAAGATGTGACATATCCAGGCGGAACATCATGATGCAGGGAAACACATGAGTCCCCACTTCCATATAGCATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504361.1
CDS TCA 90 bp TGTGTCCATCCCAAAATTCCTGCTGATGAAATCATAACGCTGATGTaGTGCTATATGGAAGTGGGGACTCATGTGTTTCCCTGCATCATG +
Preference number: 5 (lower is better)
Translates to: CVHPKIPADEIITLM*CYMEVGTHVFPCIM
Trigger: CATGATGCAGGGAAACACATGAGTCCCCACTTCCATATAGCATCACATCAGCGTTATGATTTCATCAGCAGGAATTTTGGGATGGACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504361.1
CDS GCA 90 bp AAAAGAGAACTCTGCATAAATTCGGCAGTGCTAGGAACCAATATGTaGTACTTTCCTCTAGAGGGCATGTGGGTCTCCTGCATAACTCAA +
Preference number: 5 (lower is better)
Translates to: KRELCINSAVLGTNM*YFPLEGMWVSCITQ
Trigger: TTGAGTTATGCAGGAGACCCACATGCCCTCTAGAGGAAAGTAGCACATATTGGTTCCTAGCACTGCCGAATTTATGCAGAGTTCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512124.6
CDS GCA 90 bp ACACTGAGAAATATCTTACTGTGGGTCTCCTGCATAACTCAACTGTaGAGGGCGTATCCCAAAGTGGACGATAATCGGAAAAGTAATCAC +
Preference number: 5 (lower is better)
Translates to: TLRNILLWVSCITQL*RAYPKVDDNRKSNH
Trigger: GTGATTACTTTTCCGATTATCGTCCACTTTGGGATACGCCCTGCACAGTTGAGTTATGCAGGAGACCCACAGTAAGATATTTCTCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511803.1
CDS CCA 90 bp CAGGAAAGAACTAGGGTTGTTCTGGAAACTATTAAAACTGGGAGGTaGGAAGTTGTGGTGAGAATAGCCCGGAGGGTACTGATAATTAAC +
Preference number: 5 (lower is better)
Translates to: QERTRVVLETIKTGR*EVVVRIARRVLIIN
Trigger: GTTAATTATCAGTACCCTCCGGGCTATTCTCACCACAACTTCCCACCTCCCAGTTTTAATAGTTTCCAGAACAACCCTAGTTCTTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000507438.5
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACTTCTCGGTTGCGGTTaGGAAACAGAGACACTGAAG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSLLGCG*ETETLK
Trigger: CTTCAGTGTCTCTGTTTCCAAACCGCAACCGAGAAG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATCTGTCTCTTCTCGGTaGCGGTTTGGAAACAGAGAC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSVSSR*RFGNRD
Trigger: GTCTCTGTTTCCAAACCGCAACCGAGAAGAGACAGA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000513349.5
CDS-3UTR CAA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGAAGCAGCCTCAGATTTaGGGGCCTAAAGGATGGTGC +
Preference number: 5 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLKQPQI*GPKGWC
Trigger: GCACCATCCTTTAGGCCCCAAAATCTGAGGCTGCTT...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACGCCTTTGCGCTGCATTaGCAGAGTGGTCCATCATTC +
Preference number: 5 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHAFALH*QSGPSF
Trigger: GAATGATGGACCACTCTGCAAATGCAGCGCAAAGGC...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTCTGTGCGTCTTGCCTTaGCGCTGCATTTGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLLCVLP*RCICRV
Trigger: CACTCTGCAAATGCAGCGCAAAGGCAAGACGCACAG...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACTCAGGCACCAGGGCTTaGCTGCACCTTAACAAGTAC +
Preference number: 5 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHSGTRA*LHLNKY
Trigger: GTACTTGTTAAGGTGCAGCAAAGCCCTGGTGCCTGA...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGGTTTCGTCCCAGGGTaGGTAACAATCATGCCTTTG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSGFVPG*VTIMPL
Trigger: CAAAGGCATGATTGTTACCAACCCTGGGACGAAACC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACTGTTCACGATCCAGTaGATCGATACGGACAGAGCT +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSLFTIQ*IDTDRA
Trigger: AGCTCTGTCCGTATCGATCAACTGGATCGTGAACAG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAACTCTTCCACAGTTTTaGGTACTGTGGGTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSTLPQF*VLWVSC
Trigger: GCAGGAGACCCACAGTACCAAAAACTGTGGAAGAGT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATTTCTGTCTCCGTATTaGGGCTGCCGAATTCCACAG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSFLSPY*GCRIPQ
Trigger: CTGTGGAATTCGGCAGCCCAAATACGGAGACAGAAA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATGGCAGTCCGATAGGTaGCTAATCCTCCTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSWQSDR*LILLLP
Trigger: TGGAAGAAGGAGGATTAGCAACCTATCGGACTGCCA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTCGTCCAAATAACTGCTaGGCTTCCTCCAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLRPNNC*ASSRLP
Trigger: GGGAAGCCTGGAGGAAGCCAAGCAGTTATTTGGACG...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGCTCTTGGTCTTGTCGTaGGTTATGGCGTACTCCTGC +
Preference number: 5 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLLLVLS*VMAYSC
Trigger: GCAGGAGTACGCCATAACCAACGACAAGACCAAGAG...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACACAGGCCTCTTGGTCTaGTCGTTGGTTATGGCGTAC +
Preference number: 5 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHTGLLV*SLVMAY
Trigger: GTACGCCATAACCAACGACAAGACCAAGAGGCCTGT...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGCGCCACAGGCCTCTaGGTCTTGTCGTTGGTTATG +
Preference number: 5 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLSATGL*VLSLVM
Trigger: CATAACCAACGACAAGACCAAGAGGCCTGTGGCGCT...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAACTGTCTGCAGAGTCTaGTACAGAGGAATGTCTGGC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSTVCRV*YRGMSG
Trigger: GCCAGACATTCCTCTGTACAAGACTCTGCAGACAGT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATTTCAAGCGCATCCATaGCTGCTCCCATTTCCGCTT +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSFQAHP*LLPFPL
Trigger: AAGCGGAAATGGGAGCAGCAATGGATGCGCTTGAAA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS TCA 90 bp CGTCTAACTCTTCCACTAGATTATCAGCTCCTTGATGATATGGGTTaGTTCACAGTCATTTCTGTATCCTTCACATCCCCGGGAAAAGCA +
Preference number: 5 (lower is better)
Translates to: RLTLPLDYQLLDDMG*FTVISVSFTSPGKA
Trigger: TGCTTTTCCCGGGGATGTGAAGGATACAGAAATGACTGTGAATCAACCCATATCATCAAGGAGCTGATAATCTAGTGGAAGAGTTAGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344624.8
ENST00000504361.1
ENST00000507438.5
ENST00000511367.6
ENST00000513349.5
CDS GCA 90 bp AATTGGCTAAGACAAACACTGAGAAATATCTTACTGTGGGTCTCCTaGATAACTCAACTGTGCAGGGCGTATCCCAAAGTGGACGATAAT +
Preference number: 5 (lower is better)
Translates to: NWLRQTLRNILLWVS*ITQLCRAYPKVDDN
Trigger: ATTATCGTCCACTTTGGGATACGCCCTGCACAGTTGAGTTATGCAGGAGACCCACAGTAAGATATTTCTCAGTGTTTGTCTTAGCCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511803.1
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGGTTCATATTGATATaGCACAGGAGGCTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSRFILI*HRRLLR
Trigger: CCTCAGCAGCCTCCTGTGCAATATCAATATGAACCT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTGATGGTGATCTTCGGTaGTCTCGATGCCTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLDGDLR*SRCLCL
Trigger: GAGACACAGGCATCGAGACAACCGAAGATCACCATC...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATTGCCAGAACTCTGGTaGTCACTCCAACGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSLPELW*SLQRSF
Trigger: AAAAGACCGTTGGAGTGACAACCAGAGTTCTGGCAA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAGAGGCTGAACTCCTCCTCAAATTaGTCATATAAGTCACGAAGC +
Preference number: 5 (lower is better)
Translates to: MSLNVMLAFYCRAHLERLNSSSN*SYKSRS
Trigger: GCTTCGTGACTTATATGACAAATTTGAGGAGGAGTT...CAGCCTCTCTAAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTGCCTTTGCGCTGCATTaGCAGAGTGGTCCATCATTC +
Preference number: 5 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLAFALH*QSGPSF
Trigger: GAATGATGGACCACTCTGCAAATGCAGCGCAAAGGC...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAAAAGTCTGCCAGCATaGTTGGTCATAGGACGACAG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSKSLPA*LVIGRQ
Trigger: CTGTCGTCCTATGACCAACAATGCTGGCAGACTTTT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGTAATCACATCGGGGTaGAACTGTTCACGATCCAGT +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSVITSG*NCSRSS
Trigger: ACTGGATCGTGAACAGTTCAACCCCGATGTGATTAC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGACTCTTCCACAGTTTTaGGTACTGTGGGTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLTLPQF*VLWVSC
Trigger: GCAGGAGACCCACAGTACCAAAAACTGTGGAAGAGT...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGAACAGGTAGCATCATaGCATGCTGACAGACATCAG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSEQVAS*HADRHQ
Trigger: CTGATGTCTGTCAGCATGCAATGATGCTACCTGTTC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGTTTCTGTCTCCGTATTaGGGCTGCCGAATTCCACAG +
Preference number: 5 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLFLSPY*GCRIPQ
Trigger: CTGTGGAATTCGGCAGCCCAAATACGGAGACAGAAA...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACCAGTTCAAGTTTCTTaGCTAGCATGGCAAGGTGCT +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSPVQVS*LAWQGA
Trigger: AGCACCTTGCCATGCTAGCAAAGAAACTTGAACTGG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCACTGTCTGCAGAGTCTaGTACAGAGGAATGTCTGGC +
Preference number: 5 (lower is better)
Translates to: GFLLQNTHCLERGKFNICTVCRV*YRGMSG
Trigger: GCCAGACATTCCTCTGTACAAGACTCTGCAGACAGT...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTCCGCTTGCTGAATACTaGGTCCTTTCCCACAGCCTA +
Preference number: 5 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLPLAEY*VLSHSL
Trigger: TAGGCTGTGGGAAAGGACCAAGTATTCAGCAAGCGG...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATGCTCCCATTTCCGCTaGCTGAATACTTGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSCSHFR*LNTWSF
Trigger: AAAGGACCAAGTATTCAGCAAGCGGAAATGGGAGCA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCTTTCAAGCGCATCCATaGCTGCTCCCATTTCCGCTT +
Preference number: 5 (lower is better)
Translates to: GFLLQNTHCLERGKFNICFQAHP*LLPFPL
Trigger: AAGCGGAAATGGGAGCAGCAATGGATGCGCTTGAAA...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS CCA 90 bp TCACAGAGATTTTTAGAAATGGGAGAGAACATTGAGATAATGGAGTaGGACCCACTTATTACAGCTAAGAGTGAGAGCCCCAGTGAGTTT +
Preference number: 5 (lower is better)
Translates to: SQRFLEMGENIEIME*DPLITAKSESPSEF
Trigger: AAACTCACTGGGGCTCTCACTCTTAGCTGTAATAAGTGGGTCCCACTCCATTATCTCAATGTTCTCTCCCATTTCTAAAAATCTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509067.1
CDS-3UTR CAA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGAGGTTCATATTGATATaGCACAGGAGGCTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLRFILI*HRRLLR
Trigger: CCTCAGCAGCCTCCTGTGCAATATCAATATGAACCT...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAACTTGGAGGTTCATATaGATATTGCACAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSTWRFI*ILHRRL
Trigger: CAGCCTCCTGTGCAATATCAATATGAACCTCCAAGT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATGGTGGAAGGGGCACTaGGAGGTTCATATTGATATT +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSWWKGH*EVHIDI
Trigger: AATATCAATATGAACCTCCAAGTGCCCCTTCCACCA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTACTCTTCCACAGTTTTaGGTACTGTGGGTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLTLPQF*VLWVSC
Trigger: GCAGGAGACCCACAGTACCAAAAACTGTGGAAGAGT...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAATTCCAACCGTTCATaGTGGTTAATCCTCGAGGGA +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSNSNRS*WLILEG
Trigger: TCCCTCGAGGATTAACCACAATGAACGGTTGGAATT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCCCAGTTCAAGTTTCTTaGCTAGCATGGCAAGGTGCT +
Preference number: 5 (lower is better)
Translates to: GFLLQNTHCLERGKFNICPVQVS*LAWQGA
Trigger: AGCACCTTGCCATGCTAGCAAAGAAACTTGAACTGG...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACAAAACAATTGGCCATaGCATGTCGAAGGTCCGATT +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSQNNWP*HVEGPI
Trigger: AATCGGACCTTCGACATGCAATGGCCAATTGTTTTG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAACGCTTCAAAACAATaGGCCATTGCATGTCGAAGG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSNASKQ*AIACRR
Trigger: CCTTCGACATGCAATGGCCAATTGTTTTGAAGCGTT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGTTGTCGATCAGTATTaGGCTCTTGTAGTTGGAGTG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSVVDQY*ALVVGV
Trigger: CACTCCAACTACAAGAGCCAAATACTGATCGACAAC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCTGCTCCCATTTCCGCTaGCTGAATACTTGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: GFLLQNTHCLERGKFNICCSHFR*LNTWSF
Trigger: AAAGGACCAAGTATTCAGCAAGCGGAAATGGGAGCA...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGCACACTTCATTCATaGTCTGCAGGAAAACTAGGC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSTLHS*SAGKLG
Trigger: GCCTAGTTTTCCTGCAGACAATGAATGAAGTGTGCT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCACTTGGAGGTTCATATaGATATTGCACAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GFLLQNTHCLERGKFNICTWRFI*ILHRRL
Trigger: CAGCCTCCTGTGCAATATCAATATGAACCTCCAAGT...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGTGGTGGAAGGGGCACTaGGAGGTTCATATTGATATT +
Preference number: 5 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLWWKGH*EVHIDI
Trigger: AATATCAATATGAACCTCCAAGTGCCCCTTCCACCA...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTTCTTCTTCTCCCTACTaGGGGAGCGATGATTCACAA +
Preference number: 5 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLSSSPY*GSDDSQ
Trigger: TTGTGAATCATCGCTCCCCAAGTAGGGAGAAGAAGA...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATGGGCCTTTTTGCGTTaGATTTCTGCAATAACGTCA +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSWAFLR*ISAITS
Trigger: TGACGTTATTGCAGAAATCAAACGCAAAAAGGCCCA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAAAAGTCTGCCAGCATaGTTGGTCATAGGACGACAG +
Preference number: 5 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLKSLPA*LVIGRQ
Trigger: CTGTCGTCCTATGACCAACAATGCTGGCAGACTTTT...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATCAGTTTGTTTGACTTaGGGACTATTTGCTAGGAGG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSSVCLT*GLFARR
Trigger: CCTCCTAGCAAATAGTCCCAAAGTCAAACAAACTGA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATGTGCCAGCTTCTGTTaGTCAGTTTGTTTGACTTTG +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSCASFC*SVCLTL
Trigger: CAAAGTCAAACAAACTGACAAACAGAAGCTGGCACA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTCCAGTTCAAGTTTCTTaGCTAGCATGGCAAGGTGCT +
Preference number: 5 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLPVQVS*LAWQGA
Trigger: AGCACCTTGCCATGCTAGCAAAGAAACTTGAACTGG...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCAACGCTTCAAAACAATaGGCCATTGCATGTCGAAGG +
Preference number: 5 (lower is better)
Translates to: GFLLQNTHCLERGKFNICNASKQ*AIACRR
Trigger: CCTTCGACATGCAATGGCCAATTGTTTTGAAGCGTT...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGCCCTCCTTTATTTCTaGATGTCTTCAGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSALLYF*MSSVSS
Trigger: AGATGAGACTGAAGACATCAAGAAATAAAGGAGGGC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGTAAATACTCCACACTaGCATGCCCTCCTTTATTTC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSVNTPH*HALLYF
Trigger: GAAATAAAGGAGGGCATGCAAGTGTGGAGTATTTAC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCAGCACACTTCATTCATaGTCTGCAGGAAAACTAGGC +
Preference number: 5 (lower is better)
Translates to: GFLLQNTHCLERGKFNICSTLHS*SAGKLG
Trigger: GCCTAGTTTTCCTGCAGACAATGAATGAAGTGTGCT...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS TCA 90 bp TTCGCAACAAAGTTAAGTGTCCTTCATGATGATCTGGGAAATGAATaGATAAGTACTCTGTGGCTACCAGTTGCATTATGGAGTCACCTA +
Preference number: 5 (lower is better)
Translates to: FATKLSVLHDDLGNE*ISTLWLPVALWSHL
Trigger: TAGGTGACTCCATAATGCAACTGGTAGCCACAGAGTACTTATTCATTCATTTCCCAGATCATCATGAAGGACACTTAACTTTGTTGCGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAACTCCTCCTCAAATTaGTCATATAAGTCACGAAGC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSNSSSN*SYKSRS
Trigger: GCTTCGTGACTTATATGACAAATTTGAGGAGGAGTT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCTCAGTTTGTTTGACTTaGGGACTATTTGCTAGGAGG +
Preference number: 5 (lower is better)
Translates to: GFLLQNTHCLERGKFNICSVCLT*GLFARR
Trigger: CCTCCTAGCAAATAGTCCCAAAGTCAAACAAACTGA...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACTGTGCCAGCTTCTGTTaGTCAGTTTGTTTGACTTTG +
Preference number: 5 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHCASFC*SVCLTL
Trigger: CAAAGTCAAACAAACTGACAAACAGAAGCTGGCACA...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAATTCCAACCGTTCATaGTGGTTAATCCTCGAGGGA +
Preference number: 5 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLNSNRS*WLILEG
Trigger: TCCCTCGAGGATTAACCACAATGAACGGTTGGAATT...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACGCCCTCCTTTATTTCTaGATGTCTTCAGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHALLYF*MSSVSS
Trigger: AGATGAGACTGAAGACATCAAGAAATAAAGGAGGGC...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCAACTCCTCCTCAAATTaGTCATATAAGTCACGAAGC +
Preference number: 5 (lower is better)
Translates to: GFLLQNTHCLERGKFNICNSSSN*SYKSRS
Trigger: GCTTCGTGACTTATATGACAAATTTGAGGAGGAGTT...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACTTCTGTTTGTCAGTTaGTTTGACTTTGGGACTATT +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSLLFVS*FDFGTI
Trigger: AATAGTCCCAAAGTCAAACAAACTGACAAACAGAAG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTTGTGCCAGCTTCTGTTaGTCAGTTTGTTTGACTTTG +
Preference number: 5 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLCASFC*SVCLTL
Trigger: CAAAGTCAAACAAACTGACAAACAGAAGCTGGCACA...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCATTACTTCTCGTCTCATaGTATTCTTCTGCCGTATTT +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSLLLVS*YSSAVF
Trigger: AAATACGGCAGAAGAATACAATGAGACGAGAAGTAA...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAGTATATCCTATCAACTaGTCCAAATGCATTAGGCAT +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSVYPIN*SKCIRH
Trigger: ATGCCTAATGCATTTGGACAAGTTGATAGGATATAC...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCACAACAGACAACGATCTaGGAAAGTATATCCTATCAA +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSQQTTI*ESISYQ
Trigger: TTGATAGGATATACTTTCCAAGATCGTTGTCTGTTG...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp ACTTCATTCATTGTCTGCAGGAAAACTAGGCTAGGTCTCAATAGACAACAGTCAAGAAGTTTCAATAAGTaGTCGATCAGTATTTGGCTC +
Preference number: 5 (lower is better)
Translates to: TSFIVCRKTRLGLNRQQSRSFNK*SISIWL
Trigger: GAGCCAAATACTGATCGACAACTTATTGAAACTTCT...TGACTGTTGTCTATTGAGACCTAGCCTAGTTTTCCTGCAGACAATGAATGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTGTAAATACTCCACACTaGCATGCCCTCCTTTATTTC +
Preference number: 5 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLVNTPH*HALLYF
Trigger: GAAATAAAGGAGGGCATGCAAGTGTGGAGTATTTAC...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS TCA 90 bp AATCCCACAGTTCTCAATGTGAATGCCCTTGCCAGAAGTCGAACATaGGTAAAAATTACTCCAATTGCTTCTTCAAACTCAGTAAGTTTT +
Preference number: 5 (lower is better)
Translates to: NPTVLNVNALARSRT*VKITPIASSNSVSF
Trigger: AAAACTTACTGAGTTTGAAGAAGCAATTGGAGTAATTTTTACTCATGTTCGACTTCTGGCAAGGGCATTCACATTGAGAACTGTGGGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344624.8
ENST00000504133.5
ENST00000510178.1
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS-3UTR CAA 90 bp ATCTGGGACACAGATGGAAAAACAGGATCTATTCCACATAGAATATGCTTCTTGGTATATCCTATCAACTaGTCCAAATGCATTAGGCAT +
Preference number: 5 (lower is better)
Translates to: IWDTDGKTGSIPHRICFLVYPIN*SKCIRH
Trigger: ATGCCTAATGCATTTGGACAAGTTGATAGGATATAC...CAAGAAGCATATTCTATGTGGAATAGATCCTGTTTTTCCATCTGTGTCCCAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp GGATTCCTTCTACAAAACACTCACTGCTTAGAGAGAGGTAAGTTCAATATTTGCCAACAGACAACGATCTaGGAAAGTATATCCTATCAA +
Preference number: 5 (lower is better)
Translates to: GFLLQNTHCLERGKFNICQQTTI*ESISYQ
Trigger: TTGATAGGATATACTTTCCAAGATCGTTGTCTGTTG...GCAAATATTGAACTTACCTCTCTCTAAGCAGTGAGTGTTTTGTAGAAGGAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS-3UTR CAA 90 bp TCCCCTTCTCCCATTAGCCAATTAATTGTTAAACGGATTCCTTCTACAAAACACCAACAGACAACGATCTaGGAAAGTATATCCTATCAA +
Preference number: 5 (lower is better)
Translates to: SPSPISQLIVKRIPSTKHQQTTI*ESISYQ
Trigger: TTGATAGGATATACTTTCCAAGATCGTTGTCTGTTG...GTGTTTTGTAGAAGGAATCCGTTTAACAATTAATTGGCTAATGGGAGAAGGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS TCA 90 bp AGGACAGTGTTTTGTAAAATTCCTTCTCCCATGAGCAGAAATTTCTaGAATGCCAATAAAGCATGGAAGCTCGTTTCTCATTTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: RTVFCKIPSPMSRNF*NANKAWKLVSHFFE
Trigger: TTCAAAGAAATGAGAAACGAGCTTCCATGCTTTATTGGCATTTCAGAAATTTCTGCTCATGGGAGAAGGAATTTTACAAAACACTGTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511778.5
CDS GCA 90 bp ATGTTGAATCTAATTACTTTACACAGTGGAATCTCAAATTCAATATaGAGGGAAGATGACGAGTCTAGTTTCACACAGGTTGAGGGTAAA +
Preference number: 5 (lower is better)
Translates to: MLNLITLHSGISNSI*REDDESSFTQVEGK
Trigger: TTTACCCTCAACCTGTGTGAAACTAGACTCGTCATCTTCCCTGCATATTGAATTTGAGATTCCACTGTGTAAAGTAATTAGATTCAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512885.1
CDS-3UTR CAA 90 bp TTAAAATGTTATGTCTTTGAATGTCATGTTAGCCTTTTACTGCAGGGCCCACTTAGAAGTTTCAATAAGTaGTCGATCAGTATTTGGCTC +
Preference number: 5 (lower is better)
Translates to: LKCYVFECHVSLLLQGPLRSFNK*SISIWL
Trigger: GAGCCAAATACTGATCGACAACTTATTGAAACTTCT...AAGTGGGCCCTGCAGTAAAAGGCTAACATGACATTCAAAGACATAACATTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344624.8
ENST00000511367.6
CDS GCA 72 bp ATCTGTACCGGCTGTCTTGTCTTCTCCTGTCGGGACTaGGGCCTCGCTCCCGCCGATCCAGGGACCGATGCC +
Preference number: 6 (lower is better)
Translates to: ICTGCLVFSCRD*GLAPADPGTDA
Trigger: GGCATCGGTCCCTGGATCGGCGGGAGCGAGGCCGCAGTCCCGACAGGAGAAGACAAGACAGCCGGTACAGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000512302.1
ENST00000513349.5
CDS CCA 72 bp AGCAAAGCCAGGCTACTACCGCAGGTACCAAGACAGTaGCACCGCCCGCGCCTCCGGAACAGGAAACCGAGG +
Preference number: 6 (lower is better)
Translates to: SKARLLPQVPRQ*HRPRLRNRKPR
Trigger: CCTCGGTTTCCTGTTCCGGAGGCGCGGGCGGTGCCACTGTCTTGGTACCTGCGGTAGTAGCCTGGCTTTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513349.5
CDS CAA 90 bp AGGTCCGCCAAGGTCTTGGTGCGAAGCGCCACAGGCCTCTTGGTCTaGTCGTTGGTTATGGCGTACTCCTGCATGCCCAGCTCCTCCGCT +
Preference number: 6 (lower is better)
Translates to: RSAKVLVRSATGLLV*SLVMAYSCMPSSSA
Trigger: AGCGGAGGAGCTGGGCATGCAGGAGTACGCCATAACCAACGACAAGACCAAGAGGCCTGTGGCGCTTCGCACCAAGACCTTGGCGGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS CCA 72 bp TGGTGCGAAGCGCCACAGGCCTCTTGGTCTTGTCGTTaGTTATGGCGTACTCCTGCATGCCCAGCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: WCEAPQASWSCR*LWRTPACPAPP
Trigger: CGGAGGAGCTGGGCATGCAGGAGTACGCCATAACCAACGACAAGACCAAGAGGCCTGTGGCGCTTCGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS CCA 72 bp GAAGCGCCACAGGCCTCTTGGTCTTGTCGTTGGTTATaGCGTACTCCTGCATGCCCAGCTCCTCCGCTACCT +
Preference number: 6 (lower is better)
Translates to: EAPQASWSCRWL*RTPACPAPPLP
Trigger: AGGTAGCGGAGGAGCTGGGCATGCAGGAGTACGCCATAACCAACGACAAGACCAAGAGGCCTGTGGCGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS CCA 72 bp CCGCCAAGGTCTTGGTGCGAAGCGCCACAGGCCTCTTaGTCTTGTCGTTGGTTATGGCGTACTCCTGCATGC +
Preference number: 6 (lower is better)
Translates to: PPRSWCEAPQAS*SCRWLWRTPAC
Trigger: GCATGCAGGAGTACGCCATAACCAACGACAAGACCAAGAGGCCTGTGGCGCTTCGCACCAAGACCTTGGCGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS CAA 72 bp TCTCCCTCGGTCATAATCAGATCTGTACCGGCTGTCTaGTCTTCTCCTGTCGGGACTGCGGCCTCGCTCCCG +
Preference number: 6 (lower is better)
Translates to: SPSVIIRSVPAV*SSPVGTAASLP
Trigger: CGGGAGCGAGGCCGCAGTCCCGACAGGAGAAGACAAGACAGCCGGTACAGATCTGATTATGACCGAGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000512302.1
ENST00000513349.5
CDS CAA 90 bp AGATGGTGTTCTCCCTCGGTCATAATCAGATCTGTACCGGCTGTCTaGTCTTCTCCTGTCGGGACTGCGGCCTCGCTCCCGCCGATCCAG +
Preference number: 6 (lower is better)
Translates to: RWCSPSVIIRSVPAV*SSPVGTAASLPPIQ
Trigger: CTGGATCGGCGGGAGCGAGGCCGCAGTCCCGACAGGAGAAGACAAGACAGCCGGTACAGATCTGATTATGACCGAGGGAGAACACCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000512302.1
ENST00000513349.5
CDS CAA 90 bp TCCAAAAGGTCCGCCAAGGTCTTGGTGCGAAGCGCCACAGGCCTCTaGGTCTTGTCGTTGGTTATGGCGTACTCCTGCATGCCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SKRSAKVLVRSATGL*VLSLVMAYSCMPSS
Trigger: GGAGCTGGGCATGCAGGAGTACGCCATAACCAACGACAAGACCAAGAGGCCTGTGGCGCTTCGCACCAAGACCTTGGCGGACCTTTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS GCA 72 bp TCTCCCTACTTGGGGAGCGACTGCTCCGTTCGTAGCTaGGGTGGCGAGATGGTGTTCTCCCTCGGTCATAAT +
Preference number: 6 (lower is better)
Translates to: SPYLGSDCSVRS*GGEMVFSLGHN
Trigger: ATTATGACCGAGGGAGAACACCATCTCGCCACCGCAGCTACGAACGGAGCAGTCGCTCCCCAAGTAGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512076.1
CDS CCA 72 bp GGAGCGACTGCTCCGTTCGTAGCTGCGGTGGCGAGATaGTGTTCTCCCTCGGTCATAATCAGATCTGTACCG +
Preference number: 6 (lower is better)
Translates to: GATAPFVAAVAR*CSPSVIIRSVP
Trigger: CGGTACAGATCTGATTATGACCGAGGGAGAACACCATCTCGCCACCGCAGCTACGAACGGAGCAGTCGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512076.1
CDS CAA 72 bp AAGGTCTTGGTGCGAAGCGCCACAGGCCTCTTGGTCTaGTCGTTGGTTATGGCGTACTCCTGCATGCCCAGC +
Preference number: 6 (lower is better)
Translates to: KVLVRSATGLLV*SLVMAYSCMPS
Trigger: GCTGGGCATGCAGGAGTACGCCATAACCAACGACAAGACCAAGAGGCCTGTGGCGCTTCGCACCAAGACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS CAA 72 bp TCCGCCAAGGTCTTGGTGCGAAGCGCCACAGGCCTCTaGGTCTTGTCGTTGGTTATGGCGTACTCCTGCATG +
Preference number: 6 (lower is better)
Translates to: SAKVLVRSATGL*VLSLVMAYSCM
Trigger: CATGCAGGAGTACGCCATAACCAACGACAAGACCAAGAGGCCTGTGGCGCTTCGCACCAAGACCTTGGCGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS CCA 72 bp TCGCTCTCTGCTCCGTTCGTAGCTGCGGTGGCGAGATaGTGTTCTCCCTCGGTCATAATCAGATCTGTACCG +
Preference number: 6 (lower is better)
Translates to: SLSAPFVAAVAR*CSPSVIIRSVP
Trigger: CGGTACAGATCTGATTATGACCGAGGGAGAACACCATCTCGCCACCGCAGCTACGAACGGAGCAGAGAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000513349.5
CDS GCA 72 bp CAGCAGGTTCAGGAACAACCGATAAACCGTAACTCCTaGTCCGTTCGTAGCTGCGGTGGCGAGATGGTGTTC +
Preference number: 6 (lower is better)
Translates to: QQVQEQPINRNS*SVRSCGGEMVF
Trigger: GAACACCATCTCGCCACCGCAGCTACGAACGGAGCAGGAGTTACGGTTTATCGGTTGTTCCTGAACCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512302.1
CDS CCA 72 bp ATTTCTGCCACTCCAGCTCCTCCCACTGAAGCATATTaGCAATCTCCTCCTCAGGCACCAGGGCTTTGCTGC +
Preference number: 6 (lower is better)
Translates to: ISATPAPPTEAY*QSPPQAPGLCC
Trigger: GCAGCAAAGCCCTGGTGCCTGAGGAGGAGATTGCCAATATGCTTCAGTGGGAGGAGCTGGAGTGGCAGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344624.8
ENST00000510375.5
ENST00000511367.6
ENST00000511803.1
ENST00000512124.6
ENST00000513349.5
CDS CCA 72 bp GTAACTCCTGCTCCGTTCGTAGCTGCGGTGGCGAGATaGTGTTCTCCCTCGGTCATAATCAGATCTGTACCG +
Preference number: 6 (lower is better)
Translates to: VTPAPFVAAVAR*CSPSVIIRSVP
Trigger: CGGTACAGATCTGATTATGACCGAGGGAGAACACCATCTCGCCACCGCAGCTACGAACGGAGCAGGAGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512302.1
CDS GCA 72 bp GGTTCCCACGGAGGCCGAGCAGCTTTGGCCTTTTCTTaGCTGCTCCCCAACTCCTCCTCAAATTTGTCATAT +
Preference number: 6 (lower is better)
Translates to: GSHGGRAALAFS*LLPNSSSNLSY
Trigger: ATATGACAAATTTGAGGAGGAGTTGGGGAGCAGGCAAGAAAAGGCCAAAGCTGCTCGGCCTCCGTGGGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5
CDS GCA 72 bp TCTTGGTCTTGTCGTTGGTTATGGCGTACTCCTGCATaGCCAGCTCCTCCGCTACCTTGGCCTGAGTTCTAT +
Preference number: 6 (lower is better)
Translates to: SWSCRWLWRTPA*PAPPLPWPEFY
Trigger: ATAGAACTCAGGCCAAGGTAGCGGAGGAGCTGGGCATGCAGGAGTACGCCATAACCAACGACAAGACCAAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS GCA 72 bp CAACCGATAAACCGTAACTCCTGCTCCGTTCGTAGCTaGGGTGGCGAGATGGTGTTCTCCCTCGGTCATAAT +
Preference number: 6 (lower is better)
Translates to: QPINRNSCSVRS*GGEMVFSLGHN
Trigger: ATTATGACCGAGGGAGAACACCATCTCGCCACCGCAGCTACGAACGGAGCAGGAGTTACGGTTTATCGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512302.1
CDS CCA 72 bp TGGCGTACTCCTGCATGCCCAGCTCCTCCGCTACCTTaGCCTGAGTTCTATTATTCACCAAAGAGCTTCGCA +
Preference number: 6 (lower is better)
Translates to: WRTPACPAPPLP*PEFYYSPKSFA
Trigger: TGCGAAGCTCTTTGGTGAATAATAGAACTCAGGCCAAGGTAGCGGAGGAGCTGGGCATGCAGGAGTACGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS CAA 72 bp AGGTTCCCACGGAGGCCGAGCAGCTTTGGCCTTTTCTaGCCTGCTCCCCAACTCCTCCTCAAATTTGTCATA +
Preference number: 6 (lower is better)
Translates to: RFPRRPSSFGLF*PAPQLLLKFVI
Trigger: TATGACAAATTTGAGGAGGAGTTGGGGAGCAGGCAAGAAAAGGCCAAAGCTGCTCGGCCTCCGTGGGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5
CDS CAA 72 bp GCTGCAATAAATGATTCCAAAAGGTCCGCCAAGGTCTaGGTGCGAAGCGCCACAGGCCTCTTGGTCTTGTCG +
Preference number: 6 (lower is better)
Translates to: AAINDSKRSAKV*VRSATGLLVLS
Trigger: CGACAAGACCAAGAGGCCTGTGGCGCTTCGCACCAAGACCTTGGCGGACCTTTTGGAATCATTTATTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS CCA 72 bp GGACCTTCTCTCACTGGGAGCCTTTGGGAGTGGGTATaGAGGGAGATGTCTGAAATGAGGACTACTGCTGTT +
Preference number: 6 (lower is better)
Translates to: GPSLTGSLWEWV*REMSEMRTTAV
Trigger: AACAGCAGTAGTCCTCATTTCAGACATCTCCCTCCATACCCACTCCCAAAGGCTCCCAGTGAGAGAAGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5
CDS CCA 72 bp TCCTGTGCGTCTTGCCTTTGCGCTGCATTTGCAGAGTaGTCCATCATTCATCTGGCCTGGATCGTTGTACCA +
Preference number: 6 (lower is better)
Translates to: SCASCLCAAFAE*SIIHLAWIVVP
Trigger: TGGTACAACGATCCAGGCCAGATGAATGATGGACCACTCTGCAAATGCAGCGCAAAGGCAAGACGCACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5
CDS CAA 72 bp TGCCTAATTCCTGTGCGTCTTGCCTTTGCGCTGCATTaGCAGAGTGGTCCATCATTCATCTGGCCTGGATCG +
Preference number: 6 (lower is better)
Translates to: CLIPVRLAFALH*QSGPSFIWPGS
Trigger: CGATCCAGGCCAGATGAATGATGGACCACTCTGCAAATGCAGCGCAAAGGCAAGACGCACAGGAATTAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5
CDS CAA 90 bp ATGTACAGCGCTGCAATAAATGATTCCAAAAGGTCCGCCAAGGTCTaGGTGCGAAGCGCCACAGGCCTCTTGGTCTTGTCGTTGGTTATG +
Preference number: 6 (lower is better)
Translates to: MYSAAINDSKRSAKV*VRSATGLLVLSLVM
Trigger: CATAACCAACGACAAGACCAAGAGGCCTGTGGCGCTTCGCACCAAGACCTTGGCGGACCTTTTGGAATCATTTATTGCAGCGCTGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS TCA 72 bp GTAATCACATCGGGGTTGAACTGTTCACGATCCAGTTaGTCGATACGGACAGAGCTTGGTTTCGTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: VITSGLNCSRSS*SIRTELGFVPG
Trigger: CCCTGGGACGAAACCAAGCTCTGTCCGTATCGATCAACTGGATCGTGAACAGTTCAACCCCGATGTGATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344624.8
ENST00000510375.5
ENST00000511367.6
ENST00000511803.1
ENST00000512124.6
ENST00000513349.5
CDS GCA 72 bp TATTGGCAATCTCCTCCTCAGGCACCAGGGCTTTGCTaGACCTTAACAAGTACAGGAGAATCTGGTGCATGG +
Preference number: 6 (lower is better)
Translates to: YWQSPPQAPGLC*TLTSTGESGAW
Trigger: CCATGCACCAGATTCTCCTGTACTTGTTAAGGTGCAGCAAAGCCCTGGTGCCTGAGGAGGAGATTGCCAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344624.8
ENST00000510375.5
ENST00000511367.6
ENST00000511803.1
ENST00000512124.6
ENST00000512885.1
ENST00000513349.5
CDS GCA 72 bp GCATATTGGCAATCTCCTCCTCAGGCACCAGGGCTTTaGTGCACCTTAACAAGTACAGGAGAATCTGGTGCA +
Preference number: 6 (lower is better)
Translates to: AYWQSPPQAPGL*CTLTSTGESGA
Trigger: TGCACCAGATTCTCCTGTACTTGTTAAGGTGCAGCAAAGCCCTGGTGCCTGAGGAGGAGATTGCCAATATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344624.8
ENST00000510375.5
ENST00000511367.6
ENST00000511803.1
ENST00000512124.6
ENST00000512885.1
ENST00000513349.5
CDS GCA 72 bp CTAGAGGGCATGTGGGTCTCCTGCATAACTCAACTGTaGAGGGCGTATCCCAAAGTGGACGATAATCGGAAA +
Preference number: 6 (lower is better)
Translates to: LEGMWVSCITQL*RAYPKVDDNRK
Trigger: TTTCCGATTATCGTCCACTTTGGGATACGCCCTGCACAGTTGAGTTATGCAGGAGACCCACATGCCCTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512124.6
CDS CAA 72 bp GGGCTGGAGAGTTTGAGAAAGTGGTGGAAGGGGCACTaGGAGGTTCATATTGATATTGCACAGGAGGCTGCT +
Preference number: 6 (lower is better)
Translates to: GLESLRKWWKGH*EVHIDIAQEAA
Trigger: AGCAGCCTCCTGTGCAATATCAATATGAACCTCCAAGTGCCCCTTCCACCACTTTCTCAAACTCTCCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000507438.5
ENST00000511367.6
ENST00000513349.5
CDS TCA 72 bp GCCTTTGGGAGTGGGTATGGAGGGAGATGTCTGAAATaGGGACTACTGCTGTTATTAGCACTGGGCAGGAAA +
Preference number: 6 (lower is better)
Translates to: AFGSGYGGRCLK*GLLLLLALGRK
Trigger: TTTCCTGCCCAGTGCTAATAACAGCAGTAGTCCTCATTTCAGACATCTCCCTCCATACCCACTCCCAAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5
CDS TCA 72 bp TACTCCTGCATGCCCAGCTCCTCCGCTACCTTGGCCTaGGTTCTATTATTCACCAAAGAGCTTCGCAACAAA +
Preference number: 6 (lower is better)
Translates to: YSCMPSSSATLA*VLLFTKELRNK
Trigger: TTTGTTGCGAAGCTCTTTGGTGAATAATAGAACTCAGGCCAAGGTAGCGGAGGAGCTGGGCATGCAGGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS GCA 72 bp CTCTGCATAAATTCGGCAGTGCTAGGAACCAATATGTaGTACTTTCCTCTAGAGGGCATGTGGGTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: LCINSAVLGTNM*YFPLEGMWVSC
Trigger: GCAGGAGACCCACATGCCCTCTAGAGGAAAGTAGCACATATTGGTTCCTAGCACTGCCGAATTTATGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512124.6
CDS CCA 72 bp AGGGCTTTGCTGCACCTTAACAAGTACAGGAGAATCTaGTGCATGGACAGCACTTCCTTTCCTCCATCTGGA +
Preference number: 6 (lower is better)
Translates to: RALLHLNKYRRI*CMDSTSFPPSG
Trigger: TCCAGATGGAGGAAAGGAAGTGCTGTCCATGCACCAGATTCTCCTGTACTTGTTAAGGTGCAGCAAAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344624.8
ENST00000510375.5
ENST00000511367.6
ENST00000512124.6
ENST00000512885.1
ENST00000513349.5
CDS CAA 72 bp AGTAATCACATCGGGGTTGAACTGTTCACGATCCAGTaGATCGATACGGACAGAGCTTGGTTTCGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: SNHIGVELFTIQ*IDTDRAWFRPR
Trigger: CCTGGGACGAAACCAAGCTCTGTCCGTATCGATCAACTGGATCGTGAACAGTTCAACCCCGATGTGATTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344624.8
ENST00000510375.5
ENST00000511367.6
ENST00000511803.1
ENST00000512124.6
ENST00000513349.5
CDS CAA 90 bp GGCATGCTGGATCCAACCAATGGCCTGCAGGCAACAAGTACTTACTaGTACAGAGGAATGTCTGGCTCTTTTCCTTCTGTCCTAAGTGTC +
Preference number: 6 (lower is better)
Translates to: GMLDPTNGLQATSTY*YRGMSGSFPSVLSV
Trigger: GACACTTAGGACAGAAGGAAAAGAGCCAGACATTCCTCTGTACAAGTAAGTACTTGTTGCCTGCAGGCCATTGGTTGGATCCAGCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509067.1
CDS GCA 72 bp TCCAGGATAAATGCTGTGCCTAATTCCTGTGCGTCTTaGCTTTGCGCTGCATTTGCAGAGTGGTCCATCATT +
Preference number: 6 (lower is better)
Translates to: SRINAVPNSCAS*LCAAFAEWSII
Trigger: AATGATGGACCACTCTGCAAATGCAGCGCAAAGGCAAGACGCACAGGAATTAGGCACAGCATTTATCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5
CDS GCA 72 bp CTGCTTCATATGTGGGTCTCCTGCATAACTCAACTGTaGAGGGCGTATCCCAAAGTGGACGATAATCGGAAA +
Preference number: 6 (lower is better)
Translates to: LLHMWVSCITQL*RAYPKVDDNRK
Trigger: TTTCCGATTATCGTCCACTTTGGGATACGCCCTGCACAGTTGAGTTATGCAGGAGACCCACATATGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505601.5
CDS CCA 72 bp GCCCACTGTCTGCAGAGTCTTGTACAGAGGAATGTCTaGCTCTTTTCCTTCTGTCCTAAGTGTCAAGCAACA +
Preference number: 6 (lower is better)
Translates to: AHCLQSLVQRNV*LFSFCPKCQAT
Trigger: TGTTGCTTGACACTTAGGACAGAAGGAAAAGAGCCAGACATTCCTCTGTACAAGACTCTGCAGACAGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS CAA 90 bp GCAGCTTTGGCCTTTTCTTGCCTGCTCCCCAACTCCTCCTCAAATTaGTCATATAAGTCACGAAGCCTACTCGTTCCAACCACTGTAGAA +
Preference number: 6 (lower is better)
Translates to: AALAFSCLLPNSSSN*SYKSRSLLVPTTVE
Trigger: TTCTACAGTGGTTGGAACGAGTAGGCTTCGTGACTTATATGACAAATTTGAGGAGGAGTTGGGGAGCAGGCAAGAAAAGGCCAAAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5
CDS CAA 90 bp AATCGGAAAAGTAATCACATCGGGGTTGAACTGTTCACGATCCAGTaGATCGATACGGACAGAGCTTGGTTTCGTCCCAGGGTTGGTAAC +
Preference number: 6 (lower is better)
Translates to: NRKSNHIGVELFTIQ*IDTDRAWFRPRVGN
Trigger: GTTACCAACCCTGGGACGAAACCAAGCTCTGTCCGTATCGATCAACTGGATCGTGAACAGTTCAACCCCGATGTGATTACTTTTCCGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344624.8
ENST00000510375.5
ENST00000511367.6
ENST00000511803.1
ENST00000512124.6
ENST00000513349.5
CDS CAA 90 bp CCTCCAAGTAAACAGCTCCTATTAACGCTTCAAAACAATTGGCCATaGCATGTCGAAGGTCCGATTCTCTACAAAGGTCAGGCCCGTGAG +
Preference number: 6 (lower is better)
Translates to: PPSKQLLLTLQNNWP*HVEGPILYKGQARE
Trigger: CTCACGGGCCTGACCTTTGTAGAGAATCGGACCTTCGACATGCAATGGCCAATTGTTTTGAAGCGTTAATAGGAGCTGTTTACTTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000504133.5
ENST00000511367.6
ENST00000513349.5
CDS TCA 72 bp GGAACGACATTCTGTGACATGTGTTTCCCTGCATCATaGTGTTCCGCCTGGATATGTCACATCTTCCACAGA +
Preference number: 6 (lower is better)
Translates to: GTTFCDMCFPAS*CSAWICHIFHR
Trigger: TCTGTGGAAGATGTGACATATCCAGGCGGAACATCATGATGCAGGGAAACACATGTCACAGAATGTCGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000507438.5
ENST00000511367.6
ENST00000513349.5
CDS TCA 72 bp GTCAGGCATGGTCTCCTCGGGCTCTTTTTCCTTGATTaGGGTATAGTTCTTGTCTTTGCCAGAACTCTGGTT +
Preference number: 6 (lower is better)
Translates to: VRHGLLGLFFLD*GIVLVFARTLV
Trigger: AACCAGAGTTCTGGCAAAGACAAGAACTATACCTCAATCAAGGAAAAAGAGCCCGAGGAGACCATGCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000512302.1
ENST00000513349.5
CDS TCA 72 bp CACCTGATCCATGGGGTCACTGGAGTAGTAGTTTTCTaGATGAGTGCATCGAATCCACACAGGCTTAAGAAG +
Preference number: 6 (lower is better)
Translates to: HLIHGVTGVVVF*MSASNPHRLKK
Trigger: CTTCTTAAGCCTGTGTGGATTCGATGCACTCATTCAGAAAACTACTACTCCAGTGACCCCATGGATCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5
CDS TCA 72 bp TTCATCTGGCCTGGATCGTTGTACCAAAGTTCATCATaGAGTCGGTCAGGGTGGGCCTTTTTGCGTTTGATT +
Preference number: 6 (lower is better)
Translates to: FIWPGSLYQSSS*SRSGWAFLRLI
Trigger: AATCAAACGCAAAAAGGCCCACCCTGACCGACTTCATGATGAACTTTGGTACAACGATCCAGGCCAGATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5
CDS TCA 72 bp TGTCGAAGGTCCGATTCTCTACAAAGGTCAGGCCCGTaGGCATACAGCATAAATCGATCCAGTTCAAGTTTC +
Preference number: 6 (lower is better)
Translates to: CRRSDSLQRSGP*AYSINRSSSSF
Trigger: GAAACTTGAACTGGATCGATTTATGCTGTATGCTCACGGGCCTGACCTTTGTAGAGAATCGGACCTTCGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000504133.5
ENST00000511367.6
ENST00000513349.5
CDS TCA 72 bp ATATGGAAGTGGGGACTCATGTGTTTCCCTGCATCATaGTGTTCCGCCTGGATATGTCACATCTTCCACAGA +
Preference number: 6 (lower is better)
Translates to: IWKWGLMCFPAS*CSAWICHIFHR
Trigger: TCTGTGGAAGATGTGACATATCCAGGCGGAACATCATGATGCAGGGAAACACATGAGTCCCCACTTCCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504361.1
CDS CCA 72 bp CAGACATCAGAACGGATGCCAGTTTTCCAGAATCCTTaGCTACTTAGCTCCACCGTTACTTCTCGTCTCATT +
Preference number: 6 (lower is better)
Translates to: QTSERMPVFQNP*LLSSTVTSRLI
Trigger: AATGAGACGAGAAGTAACGGTGGAGCTAAGTAGCCAAGGATTCTGGAAAACTGGCATCCGTTCTGATGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344624.8
ENST00000505601.5
ENST00000507174.1
ENST00000509608.1
ENST00000511367.6
ENST00000513349.5
CDS CCA 72 bp TCTTTGCTAGCATGGCAAGGTGCTGATTCTGAACAATaGCAGTCCGATAGGTTGCTAATCCTCCTTCTTCCA +
Preference number: 6 (lower is better)
Translates to: SLLAWQGADSEQ*QSDRLLILLLP
Trigger: TGGAAGAAGGAGGATTAGCAACCTATCGGACTGCCATTGTTCAGAATCAGCACCTTGCCATGCTAGCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000504133.5
ENST00000511367.6
ENST00000513349.5
CDS CCA 72 bp GCCTGGCAACATGAAGAAACCCCATCTAGGGTCAGATaGTTAAATCCCACAGTTCTCAATGTGAATGCCCTT +
Preference number: 6 (lower is better)
Translates to: AWQHEETPSRVR*LNPTVLNVNAL
Trigger: AAGGGCATTCACATTGAGAACTGTGGGATTTAACCATCTGACCCTAGATGGGGTTTCTTCATGTTGCCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510178.1
CDS CAA 72 bp TTTTGGAGGGCTTCCTCCCTCTGTGCCAGCTTCTGTTaGTCAGTTTGTTTGACTTTGGGACTATTTGCTAGG +
Preference number: 6 (lower is better)
Translates to: FWRASSLCASFC*SVCLTLGLFAR
Trigger: CCTAGCAAATAGTCCCAAAGTCAAACAAACTGACAAACAGAAGCTGGCACAGAGGGAGGAAGCCCTCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344624.8
ENST00000505601.5
ENST00000507174.1
ENST00000509608.1
ENST00000511367.6
ENST00000513349.5
CDS CAA 72 bp GATCCAACCAATGGCCTGCAGGCAACAAGTACTTACTaGTACAGAGGAATGTCTGGCTCTTTTCCTTCTGTC +
Preference number: 6 (lower is better)
Translates to: DPTNGLQATSTY*YRGMSGSFPSV
Trigger: GACAGAAGGAAAAGAGCCAGACATTCCTCTGTACAAGTAAGTACTTGTTGCCTGCAGGCCATTGGTTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509067.1
CDS CAA 72 bp CTCTCTTTTCTCCGTCTGTCTCTTCTCGGTTGCGGTTaGGAAACAGAGACACTGAAGGAGCTGTCTATAAAA +
Preference number: 6 (lower is better)
Translates to: LSFLRLSLLGCG*ETETLKELSIK
Trigger: TTTTATAGACAGCTCCTTCAGTGTCTCTGTTTCCAAACCGCAACCGAGAAGAGACAGACGGAGAAAAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344624.8
ENST00000504361.1
ENST00000513349.5
CDS CAA 72 bp CTCTGTGCCAGCTTCTGTTTGTCAGTTTGTTTGACTTaGGGACTATTTGCTAGGAGGTGGCGAAGTTTCACA +
Preference number: 6 (lower is better)
Translates to: LCASFCLSVCLT*GLFARRWRSFT
Trigger: TGTGAAACTTCGCCACCTCCTAGCAAATAGTCCCAAAGTCAAACAAACTGACAAACAGAAGCTGGCACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344624.8
ENST00000505601.5
ENST00000507174.1
ENST00000509608.1
ENST00000511367.6
ENST00000513349.5
CDS CAA 72 bp TATGCAGGGAAGATGACGAGTCTAGTTTCACACAGGTaGAGGGTAAAGTATCTGAGGAAACATCGAGGAGGT +
Preference number: 6 (lower is better)
Translates to: YAGKMTSLVSHR*RVKYLRKHRGG
Trigger: ACCTCCTCGATGTTTCCTCAGATACTTTACCCTCAACCTGTGTGAAACTAGACTCGTCATCTTCCCTGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512885.1
CDS TCA 72 bp AGTTGCATTATGGAGTCACCTAGGAATTCCATTCTCTaGTTGTGGCCTAGGGTCAGATGGTTAAATCCCACA +
Preference number: 6 (lower is better)
Translates to: SCIMESPRNSIL*LWPRVRWLNPT
Trigger: TGTGGGATTTAACCATCTGACCCTAGGCCACAATCAGAGAATGGAATTCCTAGGTGACTCCATAATGCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344624.8
ENST00000504133.5
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS TCA 72 bp TCTCAATCCTGGGCTCCTGTCATGATCACCCCACAATaGCTCATTCTTCAAGGCACATGGAAAGTCAATTTT +
Preference number: 6 (lower is better)
Translates to: SQSWAPVMITPQ*LILQGTWKVNF
Trigger: AAAATTGACTTTCCATGTGCCTTGAAGAATGAGTCATTGTGGGGTGATCATGACAGGAGCCCAGGATTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509067.1
CDS CCA 72 bp GCAGGCAACAAGTACTTACTTGTACAGAGGAATGTCTaGCTCTTTTCCTTCTGTCCTAAGTGTCAAGCAACA +
Preference number: 6 (lower is better)
Translates to: AGNKYLLVQRNV*LFSFCPKCQAT
Trigger: TGTTGCTTGACACTTAGGACAGAAGGAAAAGAGCCAGACATTCCTCTGTACAAGTAAGTACTTGTTGCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509067.1
CDS TCA 72 bp CTTCCACTAGATTATCAGCTCCTTGATGATATGGGTTaGTTCACAGTCATTTCTGTATCCTTCACATCCCCG +
Preference number: 6 (lower is better)
Translates to: LPLDYQLLDDMG*FTVISVSFTSP
Trigger: CGGGGATGTGAAGGATACAGAAATGACTGTGAATCAACCCATATCATCAAGGAGCTGATAATCTAGTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344624.8
ENST00000504361.1
ENST00000507438.5
ENST00000511367.6
ENST00000513349.5
CDS TCA 72 bp TTTGATTTCTGCAATAACGTCAAAAACTTCAGAGTCTaGGCTGCTAGAACAGGTGCTGTCCTCATCAGACTC +
Preference number: 6 (lower is better)
Translates to: FDFCNNVKNFRV*AARTGAVLIRL
Trigger: GAGTCTGATGAGGACAGCACCTGTTCTAGCAGCTCAGACTCTGAAGTTTTTGACGTTATTGCAGAAATCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5
CDS CCA 72 bp AATTGGCTAAGACAAACACTGAGAAATATCTTACTGTaGGTCTCCTGCATAACTCAACTGTGCAGGGCGTAT +
Preference number: 6 (lower is better)
Translates to: NWLRQTLRNILL*VSCITQLCRAY
Trigger: ATACGCCCTGCACAGTTGAGTTATGCAGGAGACCCACAGTAAGATATTTCTCAGTGTTTGTCTTAGCCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511803.1
CDS CAA 72 bp TGGATGAGTCATGGCCAGCTGCAACAGACAACGATCTaGGAAAGTATATCCTATCAACTTGTCCAAATGCAT +
Preference number: 6 (lower is better)
Translates to: WMSHGQLQQTTI*ESISYQLVQMH
Trigger: ATGCATTTGGACAAGTTGATAGGATATACTTTCCAAGATCGTTGTCTGTTGCAGCTGGCCATGACTCATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344624.8
ENST00000505601.5
ENST00000507174.1
ENST00000511367.6
ENST00000513349.5
CDS CAA 72 bp AAACAGCTCCTATTAACGCTTCAAAACAATTGGCCATaGCATGTCGAAGGTCCGATTCTCTACAAAGGTCAG +
Preference number: 6 (lower is better)
Translates to: KQLLLTLQNNWP*HVEGPILYKGQ
Trigger: CTGACCTTTGTAGAGAATCGGACCTTCGACATGCAATGGCCAATTGTTTTGAAGCGTTAATAGGAGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000504133.5
ENST00000511367.6
ENST00000513349.5
CDS GCA 72 bp ATGGTTAAATCCCACAGTTCTCAATGTGAATGCCCTTaGCAGAAGTCGAACATGAGTAAAAATTACTCCAAT +
Preference number: 6 (lower is better)
Translates to: MVKSHSSQCECP*QKSNMSKNYSN
Trigger: ATTGGAGTAATTTTTACTCATGTTCGACTTCTGGCAAGGGCATTCACATTGAGAACTGTGGGATTTAACCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344624.8
ENST00000504133.5
ENST00000510178.1
ENST00000511367.6
ENST00000511778.5
ENST00000513349.5
CDS GCA 72 bp CTAATTACTTTACACAGTGGAATCTCAAATTCAATATaGAGGGAAGATGACGAGTCTAGTTTCACACAGGTT +
Preference number: 6 (lower is better)
Translates to: LITLHSGISNSI*REDDESSFTQV
Trigger: AACCTGTGTGAAACTAGACTCGTCATCTTCCCTGCATATTGAATTTGAGATTCCACTGTGTAAAGTAATTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512885.1
CDS TCA 72 bp TGTGCAAACATAGAAAATCCTTCAAAGATATACTCGTaGTCATCGTATTCTATAACAGTTGGCCTGTCAGTT +
Preference number: 6 (lower is better)
Translates to: CANIENPSKIYS*SSYSITVGLSV
Trigger: AACTGACAGGCCAACTGTTATAGAATACGATGATCACGAGTATATCTTTGAAGGATTTTCTATGTTTGCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344624.8
ENST00000511367.6
ENST00000512076.1
ENST00000513349.5