Pregenerated sensors for DRG1 (Homo sapiens)
Ensembl gene IDs: ENSG00000185721Ensembl transcript IDs: ENST00000331457.9, ENST00000416465.5, ENST00000469673.1, ENST00000548143.1, ENST00000629688.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCATTTCACACTCAAGATGAAGTTCCCAAGGATCCCTTCTGTAGCTaGTTCACCGTATATACCCTTCCTCATTCAGCCCATCCCAAAACA | + |
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Preference number: 1 (lower is better) Translates to: PFHTQDEVPKDPFCS*FTVYTLPHSAHPKT Trigger: TGTTTTGGGATGGGCTGAATGAGGAAGGGTATATACGGTGAAGCAGCTACAGAAGGGATCCTTGGGAACTTCATCTTGAGTGTGAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| 3UTR TCA 90 bp | CTTCTCCATTCTCTGCTTAATCACTTTTTGATGGAAATTGTGGCTTaGTATACACTTCTCAGTGAGCAGATTCTTCATGAATCAAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: LLHSLLNHFLMEIVA*YTLLSEQILHESKS Trigger: AGACTTTGATTCATGAAGAATCTGCTCACTGAGAAGTGTATATCAAGCCACAATTTCCATCAAAAAGTGATTAAGCAGAGAATGGAGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548143.1 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTGGGCAACATGGCAAATCTCCGTTTAGTGGCTGTGAGATTAATGCCTCCACAGGTTCGGGCCACTaGAATGACTTGACGACCTCT | + |
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Preference number: 2 (lower is better) Translates to: QPGQHGKSPFSGCEINASTGSGH*NDLTTS Trigger: AGAGGTCGTCAAGTCATTGCAGTGGCCCGAACCTGT...GGAGGCATTAATCTCACAGCCACTAAACGGAGATTTGCCATGTTGCCCAGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416465.5 |
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| 3UTR-3UTR CCA 90 bp | CTCAAGATGAAGTTCCCAAGGATCCCTTCTGTAGCTGCTTCACCGTATATACCCTGGGGAACGCTGTTGTaGTTCGTCCGGCAGATGGGA | + |
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Preference number: 2 (lower is better) Translates to: LKMKFPRIPSVAASPYIPWGTLL*FVRQMG Trigger: TCCCATCTGCCGGACGAACCACAACAGCGTTCCCCA...GGGTATATACGGTGAAGCAGCTACAGAAGGGATCCTTGGGAACTTCATCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| 3UTR CAA 90 bp | TCATGTGGGAAAGACTACTTGAAAGGACTGAAAGCCATATCTAGTTaGGAAGGGGTTCCCATAAGTAAACATCAAGTAAGATGCAGCATG | + |
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Preference number: 2 (lower is better) Translates to: SCGKDYLKGLKAISS*EGVPISKHQVRCSM Trigger: CATGCTGCATCTTACTTGATGTTTACTTATGGGAACCCCTTCCAAACTAGATATGGCTTTCAGTCCTTTCAAGTAGTCTTTCCCACATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| 3UTR-3UTR CAA 90 bp | TGTAGCTGCTTCACCGTATATACCCTTCCTCATTCAGCCCATCCCAAAACAAATTCATGGGGAACGCTGTaGTGGTTCGTCCGGCAGATG | + |
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Preference number: 3 (lower is better) Translates to: CSCFTVYTLPHSAHPKTNSWGTL*WFVRQM Trigger: CATCTGCCGGACGAACCACAACAGCGTTCCCCATGA...ATTTGTTTTGGGATGGGCTGAATGAGGAAGGGTATATACGGTGAAGCAGCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| 3UTR GCA 72 bp | ACTCAAGATGAAGTTCCCAAGGATCCCTTCTGTAGCTaGTTCACCGTATATACCCTTCCTCATTCAGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: TQDEVPKDPFCS*FTVYTLPHSAH Trigger: ATGGGCTGAATGAGGAAGGGTATATACGGTGAAGCAGCTACAGAAGGGATCCTTGGGAACTTCATCTTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| 3UTR CCA 72 bp | AACTTACATAAAGTCCTTCCTCTCTCCAGTATCATGTaGGAAAGACTACTTGAAAGGACTGAAAGCCATATC | + |
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Preference number: 3 (lower is better) Translates to: NLHKVLPLSSIM*ERLLERTESHI Trigger: GATATGGCTTTCAGTCCTTTCAAGTAGTCTTTCCCACATGATACTGGAGAGAGGAAGGACTTTATGTAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| 3UTR TCA 72 bp | TCTCTGCTTAATCACTTTTTGATGGAAATTGTGGCTTaGTATACACTTCTCAGTGAGCAGATTCTTCATGAA | + |
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Preference number: 3 (lower is better) Translates to: SLLNHFLMEIVA*YTLLSEQILHE Trigger: TTCATGAAGAATCTGCTCACTGAGAAGTGTATATCAAGCCACAATTTCCATCAAAAAGTGATTAAGCAGAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548143.1 |
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| CDS-3UTR GCA 90 bp | CAGCCCATCCCAAAACAAATTCTGACAATGACACATGAGCTGCATGTAGCTGACCACCCGCGGGCAAACTaGCACCGCCACCAGGCGCTA | + |
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Preference number: 4 (lower is better) Translates to: QPIPKQILTMTHELHVADHPRAN*HRHQAL Trigger: TAGCGCCTGGTGGCGGTGGCAGTTTGCCCGCGGGTG...GTCAGCTACATGCAGCTCATGTGTCATTGTCAGAATTTGTTTTGGGATGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| 3UTR CAA 72 bp | TCCAGCTCACTCTGGGGGCACTGTAATCCCAACACTTaGGGAGACCGAAGCAGGAGACAGCTTGAGGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SSSLWGHCNPNT*GDRSRRQLEAK Trigger: TTTGGCCTCAAGCTGTCTCCTGCTTCGGTCTCCCAAAGTGTTGGGATTACAGTGCCCCCAGAGTGAGCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000416465.5 |
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| CDS-3UTR CCA 90 bp | TTCCCAAGGATCCCTTCTGTAGCTGCTTCACCGTATATACCCTTCCTCATTCAGGCATCCAGCTCACTCTaGGGGCAAGTGGCTGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: FPRIPSVAASPYIPFLIQASSSL*GQVAVR Trigger: TCTCACAGCCACTTGCCCCCAGAGTGAGCTGGATGC...CTGAATGAGGAAGGGTATATACGGTGAAGCAGCTACAGAAGGGATCCTTGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| CDS-3UTR CCA 90 bp | TGTAATCCCAACACTTTGGGAGACCGAAGCAGGAGACAGCTTGAGGCCAAAAGTGCATCCAGCTCACTCTaGGGGCACTGTAATCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: CNPNTLGDRSRRQLEAKSASSSL*GHCNPN Trigger: GTTGGGATTACAGTGCCCCCAGAGTGAGCTGGATGC...ACTTTTGGCCTCAAGCTGTCTCCTGCTTCGGTCTCCCAAAGTGTTGGGATTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416465.5 |
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| CDS-3UTR TCA 90 bp | AGCCTGGGCAACATGGCAAATCTCCGTTTAGTGGCTGTGAGATTAATGCCTCCCAAGCAGGAGACAGCTTaGGGCCAAAAGTTCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: SLGNMANLRLVAVRLMPPKQETA*GQKFKT Trigger: GGTCTTGAACTTTTGGCCTCAAGCTGTCTCCTGCTT...GGGAGGCATTAATCTCACAGCCACTAAACGGAGATTTGCCATGTTGCCCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416465.5 |
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| CDS-3UTR GCA 90 bp | CAGCCTGGGCAACATGGCAAATCTCCGTTTAGTGGCTGTGAGATTAATGCCTCCAGTCCGAGCCATCTCTaGTTCTATCTCCGCGATCTT | + |
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Preference number: 4 (lower is better) Translates to: QPGQHGKSPFSGCEINASSPSHL*FYLRDL Trigger: AAGATCGCGGAGATAGAAGCAGAGATGGCTCGGACT...GGAGGCATTAATCTCACAGCCACTAAACGGAGATTTGCCATGTTGCCCAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416465.5 |
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| CDS-3UTR CCA 90 bp | AGCCTGGGCAACATGGCAAATCTCCGTTTAGTGGCTGTGAGATTAATGCCTCCCACCACCACCACCCTTTaGAGTAATGAGTTCTCGACG | + |
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Preference number: 4 (lower is better) Translates to: SLGNMANLRLVAVRLMPPTTTTL*SNEFST Trigger: CGTCGAGAACTCATTACTCCAAAGGGTGGTGGTGGT...GGGAGGCATTAATCTCACAGCCACTAAACGGAGATTTGCCATGTTGCCCAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416465.5 |
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| CDS-3UTR GCA 90 bp | CATTTCACACTCAAGATGAAGTTCCCAAGGATCCCTTCTGTAGCTGCTTCACCGAGTCCGAGCCATCTCTaGTTCTATCTCCGCGATCTT | + |
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Preference number: 4 (lower is better) Translates to: HFTLKMKFPRIPSVAASPSPSHL*FYLRDL Trigger: AAGATCGCGGAGATAGAAGCAGAGATGGCTCGGACT...CGGTGAAGCAGCTACAGAAGGGATCCTTGGGAACTTCATCTTGAGTGTGAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| CDS-3UTR CCA 90 bp | TGTAATCCCAACACTTTGGGAGACCGAAGCAGGAGACAGCTTGAGGCCAAAAGTCTAAGTGGTGTGCTGTaGCCTTGTTCTTTTGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: CNPNTLGDRSRRQLEAKSLSGVL*PCSFES Trigger: GGACTCAAAAGAACAAGGCCACAGCACACCACTTAG...ACTTTTGGCCTCAAGCTGTCTCCTGCTTCGGTCTCCCAAAGTGTTGGGATTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416465.5 |
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| CDS-3UTR GCA 90 bp | TGTAGCTGCTTCACCGTATATACCCTTCCTCATTCAGCCCATCCCAAAACAAATACAGGTTCGGGCCACTaGAATGACTTGACGACCTCT | + |
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Preference number: 4 (lower is better) Translates to: CSCFTVYTLPHSAHPKTNTGSGH*NDLTTS Trigger: AGAGGTCGTCAAGTCATTGCAGTGGCCCGAACCTGT...ATTTGTTTTGGGATGGGCTGAATGAGGAAGGGTATATACGGTGAAGCAGCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| CDS-3UTR CCA 90 bp | TTCCCAAGGATCCCTTCTGTAGCTGCTTCACCGTATATACCCTTCCTCATTCAGCTAAGTGGTGTGCTGTaGCCTTGTTCTTTTGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: FPRIPSVAASPYIPFLIQLSGVL*PCSFES Trigger: GGACTCAAAAGAACAAGGCCACAGCACACCACTTAG...CTGAATGAGGAAGGGTATATACGGTGAAGCAGCTACAGAAGGGATCCTTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| CDS-3UTR CCA 90 bp | TGTAGCTGCTTCACCGTATATACCCTTCCTCATTCAGCCCATCCCAAAACAAATACCACCACCACCCTTTaGAGTAATGAGTTCTCGACG | + |
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Preference number: 4 (lower is better) Translates to: CSCFTVYTLPHSAHPKTNTTTTL*SNEFST Trigger: CGTCGAGAACTCATTACTCCAAAGGGTGGTGGTGGT...ATTTGTTTTGGGATGGGCTGAATGAGGAAGGGTATATACGGTGAAGCAGCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| CDS-3UTR CCA 90 bp | ATCCCTTCTGTAGCTGCTTCACCGTATATACCCTTCCTCATTCAGCCCATCCCACTGGTAACTGGCCTTTaGGTTTGGTGTAAATTCTCA | + |
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Preference number: 4 (lower is better) Translates to: IPSVAASPYIPFLIQPIPLVTGL*VWCKFS Trigger: TGAGAATTTACACCAAACCCAAAGGCCAGTTACCAG...TGGGATGGGCTGAATGAGGAAGGGTATATACGGTGAAGCAGCTACAGAAGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| CDS-3UTR CCA 90 bp | CCTCTCTCCAGTATCATGTGGGAAAGACTACTTGAAAGGACTGAAAGCCATATCGGTTCGTCCGGCAGATaGGAAAAGGGAAAGGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: PLSSIMWERLLERTESHIGSSGR*EKGKVS Trigger: TGAAACCTTTCCCTTTTCCCATCTGCCGGACGAACC...GATATGGCTTTCAGTCCTTTCAAGTAGTCTTTCCCACATGATACTGGAGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| CDS-3UTR CCA 90 bp | CTCAAGATGAAGTTCCCAAGGATCCCTTCTGTAGCTGCTTCACCGTATATACCCCTCTCCAGTATCATGTaGGAAAGACTACTTGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: LKMKFPRIPSVAASPYIPLSSIM*ERLLER Trigger: CCTTTCAAGTAGTCTTTCCCACATGATACTGGAGAG...GGGTATATACGGTGAAGCAGCTACAGAAGGGATCCTTGGGAACTTCATCTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| CDS-3UTR TCA 90 bp | CAGCCCATCCCAAAACAAATTCTGACAATGACACATGAGCTGCATGTAGCTGACATTTCACACTCAAGATaGAGTTCCCAAGGATCCCTT | + |
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Preference number: 4 (lower is better) Translates to: QPIPKQILTMTHELHVADISHSR*SSQGSL Trigger: AAGGGATCCTTGGGAACTTCATCTTGAGTGTGAAAT...GTCAGCTACATGCAGCTCATGTGTCATTGTCAGAATTTGTTTTGGGATGGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| CDS-3UTR GCA 90 bp | GCCATATCTAGTTTGGAAGGGGTTCCCATAAGTAAACATCAAGTAAGATGCAGCGATCCCTTCTGTAGCTaGTTCACCGTATATACCCTT | + |
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Preference number: 4 (lower is better) Translates to: AISSLEGVPISKHQVRCSDPFCS*FTVYTL Trigger: AAGGGTATATACGGTGAAGCAGCTACAGAAGGGATC...GCTGCATCTTACTTGATGTTTACTTATGGGAACCCCTTCCAAACTAGATATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| CDS-3UTR CCA 90 bp | TCTCCAGTATCATGTGGGAAAGACTACTTGAAAGGACTGAAAGCCATATCTAGTACTGGCCTTTGGGTTTaGTGTAAATTCTCACTAGTT | + |
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Preference number: 4 (lower is better) Translates to: SPVSCGKDYLKGLKAISSTGLWV*CKFSLV Trigger: AACTAGTGAGAATTTACACCAAACCCAAAGGCCAGT...ACTAGATATGGCTTTCAGTCCTTTCAAGTAGTCTTTCCCACATGATACTGGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| CDS-3UTR CCA 90 bp | TTGTGGCTTGATATACACTTCTCAGTGAGCAGATTCTTCATGAATCAAAGTCTTCTGGTAACTGGCCTTTaGGTTTGGTGTAAATTCTCA | + |
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Preference number: 4 (lower is better) Translates to: LWLDIHFSVSRFFMNQSLLVTGL*VWCKFS Trigger: TGAGAATTTACACCAAACCCAAAGGCCAGTTACCAG...AAGACTTTGATTCATGAAGAATCTGCTCACTGAGAAGTGTATATCAAGCCACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548143.1 |
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| CDS-3UTR TCA 90 bp | TTGTGGCTTGATATACACTTCTCAGTGAGCAGATTCTTCATGAATCAAAGTCTTATGGAAATTGTGGCTTaGTATACACTTCTCAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LWLDIHFSVSRFFMNQSLMEIVA*YTLLSE Trigger: CTCACTGAGAAGTGTATATCAAGCCACAATTTCCAT...AAGACTTTGATTCATGAAGAATCTGCTCACTGAGAAGTGTATATCAAGCCACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548143.1 |
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| CDS-3UTR CCA 90 bp | TTGTGGCTTGATATACACTTCTCAGTGAGCAGATTCTTCATGAATCAAAGTCTTACTGGCCTTTGGGTTTaGTGTAAATTCTCACTAGTT | + |
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Preference number: 4 (lower is better) Translates to: LWLDIHFSVSRFFMNQSLTGLWV*CKFSLV Trigger: AACTAGTGAGAATTTACACCAAACCCAAAGGCCAGT...AAGACTTTGATTCATGAAGAATCTGCTCACTGAGAAGTGTATATCAAGCCACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548143.1 |
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| 3UTR CAA 72 bp | AAAGACTACTTGAAAGGACTGAAAGCCATATCTAGTTaGGAAGGGGTTCCCATAAGTAAACATCAAGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: KDYLKGLKAISS*EGVPISKHQVR Trigger: TCTTACTTGATGTTTACTTATGGGAACCCCTTCCAAACTAGATATGGCTTTCAGTCCTTTCAAGTAGTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| CDS-3UTR CAA 90 bp | AGCCTGGGCAACATGGCAAATCTCCGTTTAGTGGCTGTGAGATTAATGCCTCCCTGTGGCCTTGTTCTTTaGAGTCCGAGCCATCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: SLGNMANLRLVAVRLMPPCGLVL*SPSHLC Trigger: GCAGAGATGGCTCGGACTCAAAAGAACAAGGCCACA...GGGAGGCATTAATCTCACAGCCACTAAACGGAGATTTGCCATGTTGCCCAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416465.5 |
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| CDS-3UTR CAA 90 bp | CTCAAGATGAAGTTCCCAAGGATCCCTTCTGTAGCTGCTTCACCGTATATACCCTCATGGGGAACGCTGTaGTGGTTCGTCCGGCAGATG | + |
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Preference number: 5 (lower is better) Translates to: LKMKFPRIPSVAASPYIPSWGTL*WFVRQM Trigger: CATCTGCCGGACGAACCACAACAGCGTTCCCCATGA...GGGTATATACGGTGAAGCAGCTACAGAAGGGATCCTTGGGAACTTCATCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| CDS-3UTR CAA 90 bp | CAGCCTGGGCAACATGGCAAATCTCCGTTTAGTGGCTGTGAGATTAATGCCTCCGAAGCAGGAGACAGCTaGAGGCCAAAAGTTCAAGAC | + |
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Preference number: 5 (lower is better) Translates to: QPGQHGKSPFSGCEINASEAGDS*RPKVQD Trigger: GTCTTGAACTTTTGGCCTCAAGCTGTCTCCTGCTTC...GGAGGCATTAATCTCACAGCCACTAAACGGAGATTTGCCATGTTGCCCAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416465.5 |
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| CDS-3UTR CAA 90 bp | CTCAAGATGAAGTTCCCAAGGATCCCTTCTGTAGCTGCTTCACCGTATATACCCTGTGGCCTTGTTCTTTaGAGTCCGAGCCATCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LKMKFPRIPSVAASPYIPCGLVL*SPSHLC Trigger: GCAGAGATGGCTCGGACTCAAAAGAACAAGGCCACA...GGGTATATACGGTGAAGCAGCTACAGAAGGGATCCTTGGGAACTTCATCTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| CDS-3UTR CAA 90 bp | ATCCCTTCTGTAGCTGCTTCACCGTATATACCCTTCCTCATTCAGCCCATCCCAAAAGCCATATCTAGTTaGGAAGGGGTTCCCATAAGT | + |
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Preference number: 5 (lower is better) Translates to: IPSVAASPYIPFLIQPIPKAISS*EGVPIS Trigger: ACTTATGGGAACCCCTTCCAAACTAGATATGGCTTT...TGGGATGGGCTGAATGAGGAAGGGTATATACGGTGAAGCAGCTACAGAAGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| CDS TCA 90 bp | ACTCTACAGAAAGTGAAGAAAAACAGGGTATTAGTCTGGAGTTGTTaGCAGAACTGTCAGACTGTTGAACAGCACACCCTCACCCAGACC | + |
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Preference number: 5 (lower is better) Translates to: TLQKVKKNRVLVWSC*QNCQTVEQHTLTQT Trigger: GGTCTGGGTGAGGGTGTGCTGTTCAACAGTCTGACAGTTCTGTCAACAACTCCAGACTAATACCCTGTTTTTCTTCACTTTCTGTAGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469673.1 |
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| CDS-3UTR CAA 90 bp | ATCCATTTCACACTCAAGATGAAGTTCCCAAGGATCCCTTCTGTAGCTGCTTCATGTGGGAAAGACTACTaGAAAGGACTGAAAGCCATA | + |
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Preference number: 5 (lower is better) Translates to: IHFTLKMKFPRIPSVAASCGKDY*KGLKAI Trigger: TATGGCTTTCAGTCCTTTCAAGTAGTCTTTCCCACA...TGAAGCAGCTACAGAAGGGATCCTTGGGAACTTCATCTTGAGTGTGAAATGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331457.9 |
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| CDS TCA 72 bp | AAAGTGAAGAAAAACAGGGTATTAGTCTGGAGTTGTTaGCAGAACTGTCAGACTGTTGAACAGCACACCCTC | + |
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Preference number: 6 (lower is better) Translates to: KVKKNRVLVWSC*QNCQTVEQHTL Trigger: GAGGGTGTGCTGTTCAACAGTCTGACAGTTCTGTCAACAACTCCAGACTAATACCCTGTTTTTCTTCACTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469673.1 |
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| CDS GCA 72 bp | GTTGGACAGTGTCTTTGCAGAATAAGGTTTCTTAACTaGACCATCCTTAAAATACCTGGAATCAACCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VGQCLCRIRFLN*TILKIPGINLL Trigger: AAGAAGGTTGATTCCAGGTATTTTAAGGATGGTGCAGTTAAGAAACCTTATTCTGCAAAGACACTGTCCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629688.1 |
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